Citrus Sinensis ID: 039397
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 349 | 2.2.26 [Sep-21-2011] | |||||||
| A4IGM4 | 286 | Hydroxysteroid 11-beta-de | yes | no | 0.704 | 0.860 | 0.298 | 4e-19 | |
| Q6P7J1 | 291 | Hydroxysteroid 11-beta-de | N/A | no | 0.613 | 0.735 | 0.307 | 1e-17 | |
| Q6PUF4 | 287 | Hydroxysteroid 11-beta-de | no | no | 0.601 | 0.731 | 0.304 | 3e-15 | |
| Q7SYS6 | 291 | Hydroxysteroid 11-beta-de | N/A | no | 0.616 | 0.738 | 0.297 | 7e-15 | |
| Q29608 | 291 | Corticosteroid 11-beta-de | N/A | no | 0.467 | 0.560 | 0.310 | 8e-14 | |
| Q7Q732 | 317 | Dehydrogenase/reductase S | yes | no | 0.696 | 0.766 | 0.261 | 1e-13 | |
| Q6Q7D1 | 287 | Hydroxysteroid 11-beta-de | yes | no | 0.690 | 0.839 | 0.283 | 2e-13 | |
| Q566S6 | 309 | Dehydrogenase/reductase S | yes | no | 0.595 | 0.673 | 0.289 | 2e-13 | |
| Q2KIJ5 | 331 | 3-ketodihydrosphingosine | no | no | 0.432 | 0.456 | 0.343 | 3e-13 | |
| Q8T197 | 316 | Dehydrogenase/reductase S | no | no | 0.541 | 0.598 | 0.284 | 3e-13 |
| >sp|A4IGM4|DHI1L_XENTR Hydroxysteroid 11-beta-dehydrogenase 1-like protein OS=Xenopus tropicalis GN=hsd11b1l PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 131/281 (46%), Gaps = 35/281 (12%)
Query: 28 CFV----NGCEWLYNNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83
CF+ + L ++F E + + V++TGAS+ IGE+IAY YA+ A LVL ARRE+
Sbjct: 9 CFIILVASAAYILRDSFDPETLANTRVLVTGASTGIGEEIAYHYARAGAKLVLTARREHA 68
Query: 84 LQ--GSTIDEYNPINEVTLV----SLNNKES---------KAVDHLVNTASLGHTFFFEE 128
LQ S E N +V S N +E +D+LV +G T F
Sbjct: 69 LQEVKSRCLELGAKNVFLVVADMASHNAREQVVAEALSALGGLDYLV-LNHIGWTPFKMW 127
Query: 129 VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188
D + L+++NF ++ ALPYL +S G ++V +S+ P+P + YA++K A
Sbjct: 128 DGDVNHTRWLMEVNFLSYIHLATAALPYLTQSKGSIIVLSSLTAKTPIPYTTSYAASKFA 187
Query: 189 LVTFYESLRFEL---NDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGP 245
L F+ SLR EL N+ V IT+ G I D K + ++ ++ P
Sbjct: 188 LEGFFSSLRHELTMQNNPVSITLCILGLI------------DTQSAMEKIKDKITMSAYP 235
Query: 246 VEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLNW 286
D A +VS + +P + +R + P +W
Sbjct: 236 ASDAALAVVSAGAGRQREMYYPWFVRPLCFFRDWFPQHRDW 276
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Xenopus tropicalis (taxid: 8364) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q6P7J1|DHI1A_XENLA Hydroxysteroid 11-beta-dehydrogenase 1-like protein A OS=Xenopus laevis GN=hsd11b1l-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 118/260 (45%), Gaps = 46/260 (17%)
Query: 39 NFYS------ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ------- 85
+FYS E++ K V+ITG+S+ IGEQIAYE+A+ A++++ ARR RLQ
Sbjct: 19 HFYSSESMNPESVRGKRVLITGSSTGIGEQIAYEFARMGAHIMVTARRLQRLQEVANECL 78
Query: 86 --GSTIDEYNPINEVTLVSLNNKESKAV-----------DHLVNTASLGHTFFFEEVTDT 132
G+ Y + L S +AV +H+ +AS G FF+ D
Sbjct: 79 KLGAASAHYVASDMGNLTSAQYVAQEAVNKLGGLDYLVLNHIGGSASFG---FFKGEMDP 135
Query: 133 SIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTF 192
+ + INF V T AL L ES G +VV +S+ + P + Y ++K AL F
Sbjct: 136 VVGS--IYINFLSYVQLTSAALKALQESQGSIVVMSSMSGRIGAPFTTSYCASKFALEGF 193
Query: 193 YESLRFEL---NDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDF 249
Y SLR E N + +T+A G+I D K +V ++ ED
Sbjct: 194 YSSLRREFALQNSNMSVTVAVLGYI------------DTENAVKKVGNKVSMSASSKEDC 241
Query: 250 ARLIVSGACRGDTYVKFPSW 269
AR +V A + +P W
Sbjct: 242 AREVVKAAVLKQPELFYPYW 261
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Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q6PUF4|DHI1L_CHICK Hydroxysteroid 11-beta-dehydrogenase 1-like protein OS=Gallus gallus GN=HSD11B1L PE=2 SV=1 | Back alignment and function description |
|---|
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 36/246 (14%)
Query: 3 LLNSFLNLVVPPASL-VMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIGE 61
++ F ++ SL V++AF W + F E + V++TGAS+ IGE
Sbjct: 1 MMKPFGKVLCAAGSLAVLLAFFW------------RDTFQPEQLSGARVLLTGASAGIGE 48
Query: 62 QIAYEYAKRKANLVLVARRENRLQ---------GST------IDEYNPINEVTLVSLNNK 106
Q+AY YA A +VL ARRE LQ G+ D +P +V +
Sbjct: 49 QMAYHYATFGAEIVLTARREAVLQEVMKKCLTLGAKKVFYIPADMSSPSEPDRVVQFAVQ 108
Query: 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVV 166
+D+LV +G + F D L+ +NF+ V ALP L +++G VVV
Sbjct: 109 NLGGLDYLVLN-HIGVSPFQMWGGDVEHTRWLMQVNFFSYVALATAALPTLEKNHGSVVV 167
Query: 167 NASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE---VGITIATHGWI----GIEMT 219
+S+ +P P + Y++ K AL F+ SLR EL + V IT+ G I +E T
Sbjct: 168 VSSLTGKIPTPFTTSYSATKFALDGFFSSLRHELTMQKRNVSITLCILGLIDTDAALEKT 227
Query: 220 KGKFML 225
+GK +
Sbjct: 228 RGKVFI 233
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Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q7SYS6|DHI1B_XENLA Hydroxysteroid 11-beta-dehydrogenase 1-like protein B OS=Xenopus laevis GN=hsd11b1l-b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 109/245 (44%), Gaps = 30/245 (12%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTIDEYN 93
E++ K V+ITG+S+ +GEQIAYE+A+ A++++ ARR +LQ G+ Y
Sbjct: 29 ESVRGKRVLITGSSTGLGEQIAYEFARMGAHIMITARRLQQLQEVASQCMKLGAASAHYV 88
Query: 94 PINEVTLVSLNNKESKAV------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ L S + +AV D+LV G F D +NF V
Sbjct: 89 ASDMGNLESAQSVAQEAVVKLGGLDYLVLNHIGGSGGFGFFKGDMDPVVGSTTVNFLSYV 148
Query: 148 YPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL---NDEV 204
T AL L ES G +VV +S+ + P + Y ++K AL FY SLR E N ++
Sbjct: 149 QLTSSALSALQESQGSIVVISSMSGRIGAPFTTSYCASKFALEGFYSSLRREFALQNSKM 208
Query: 205 GITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264
+T+A G+I E K +V + ED AR +V A +
Sbjct: 209 SVTVAVLGYIDTENAVKKV------------GNKVSMTASSKEDCAREVVKAAVLQQPEI 256
Query: 265 KFPSW 269
+P W
Sbjct: 257 FYPYW 261
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Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q29608|DHI1_SAISC Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Saimiri sciureus GN=HSD11B1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 27/190 (14%)
Query: 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTID 90
F E ++ K VI+TGAS IG ++AY AK A++V+ AR + LQ G+
Sbjct: 27 FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 86
Query: 91 EY--NPINEVTL----VSLNNKESKAVD-----HLVNTASLGHTFFFEEVTDTSIFPRLL 139
Y + ++T V+ K +D H+ NT+ FF +++ + +
Sbjct: 87 HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL---NFFHDDIHHVR---KSM 140
Query: 140 DINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
++NF V T A+P L +SNG +V+ +SV + P +S Y+++K AL F+ S+R E
Sbjct: 141 EVNFLSYVVLTVAAMPMLKQSNGSIVIVSSVAGKVAYPMISAYSASKFALYGFFSSIRKE 200
Query: 200 -LNDEVGITI 208
L EV ++I
Sbjct: 201 YLMSEVNVSI 210
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Catalyzes reversibly the conversion of cortisol to the inactive metabolite cortisone. Saimiri sciureus (taxid: 9521) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 6 |
| >sp|Q7Q732|DHRS7_ANOGA Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 28/271 (10%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTIDEY 92
+ ++ KVV+ITGASS +GE +A+ + +VL ARR++ L+ +T+ +
Sbjct: 43 ARHLNGKVVLITGASSGLGEALAHSFFLAGCKVVLAARRKDELERVRKDLLELHATVPTH 102
Query: 93 NPIN-EVTLVSLNNKESK---------AVDHLVNTASLG-HTFFFEEVTDTSIFPRLLDI 141
PI + L LN+ K A+D LVN + D I R++ +
Sbjct: 103 PPIILPLDLSDLNSIGGKVQSVLEIHGAIDILVNNGGISVRGDALSTAIDVDI--RIMLV 160
Query: 142 NFWGNVYPTFVALP-YLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
N++G+V T LP + GR+V +SV+ +P S Y+++K A+ F +SLR E+
Sbjct: 161 NYFGSVALTKACLPSMMARKEGRIVSISSVQGKFAIPHRSAYSASKHAMQAFCDSLRAEV 220
Query: 201 -NDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259
D + +T+ + G+I ++ G + + G +D A I+ R
Sbjct: 221 AKDNIKVTLISPGYINTALSLNAL---TGTGASYGKMDAATAGGASPQDTASSILKAIAR 277
Query: 260 GDTYVKF-PSWYDVFLLYRVFAPHVLNWTFR 289
+ V P R AP V W +
Sbjct: 278 DEKDVMLAPIAPRAAYWLRHLAPSVYFWIMK 308
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Putative oxidoreductase. Anopheles gambiae (taxid: 7165) EC: 1 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q6Q7D1|DHI1L_BOVIN Hydroxysteroid 11-beta-dehydrogenase 1-like protein OS=Bos taurus GN=HSD11B1L PE=2 SV=1 | Back alignment and function description |
|---|
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 38 NNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GS- 87
+NF ++ V++TG S+ IGE++AY YA+ ++LVL A E LQ G+
Sbjct: 20 DNFDPASLHGARVLLTGVSAGIGEELAYHYARLGSHLVLTAHTEALLQQVVGNCRKLGAP 79
Query: 88 -----TIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDIN 142
D +P +V + +D+LV LG V + L+ +N
Sbjct: 80 KVFYIAADMASPEVPERVVQFALDKLGGLDYLVLN-HLGAAPAGTRVRSSQSTRWLMQMN 138
Query: 143 FWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN- 201
F V T ALP L +S G +VV +S+ +P S Y++AK AL +F+ SLR EL+
Sbjct: 139 FLSYVQLTSSALPSLTDSKGSLVVVSSLLGRVPTSFSSPYSAAKFALDSFFSSLRRELDV 198
Query: 202 DEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261
EV + I T L D A V P A ++ G
Sbjct: 199 QEVNVAI----------TMCVLGLRDRASAAEGVRGITRVRAAPGPKAALAVIRGGATRA 248
Query: 262 TYVKFPSWYDVFLLYRVFAPHVLNWTFR 289
+ V +P + + L R + PH W R
Sbjct: 249 SGVFYPWRFHLLCLLRSWMPHSRAWFVR 276
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Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q566S6|DRS7B_DANRE Dehydrogenase/reductase SDR family member 7B OS=Danio rerio GN=dhrs7b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 34/242 (14%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----------GSTIDEY 92
N++DKVV+ITGASS +G++ A + A L+L R + RLQ G T Y
Sbjct: 34 NIQDKVVVITGASSGLGKECARVFHAAGARLILCGRDQRRLQEVVEELGNKTYGKT-KTY 92
Query: 93 NPINEVTLVSLNN------------KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLD 140
P VT L+N K VD L+N A + + + T S+ +++
Sbjct: 93 TPCT-VTF-DLSNTSVVCSAAAEILKRHGHVDVLINIAGVSYRGNILD-THVSVQREVME 149
Query: 141 INFWGNVYPTFVALPYL-HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
N++G V T LP + +G +VV +SV+ + +P S YA++K A+ +Y+ LR E
Sbjct: 150 TNYFGPVALTQAILPSMVDRGSGHIVVISSVQGKISIPYRSAYAASKHAMQAYYDCLRAE 209
Query: 200 LNDEVG--ITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257
+ D +G +++ + G++ M+ + DG++ +R PV D A+ I+
Sbjct: 210 V-DSLGLHVSVLSPGYVRTNMSI-NAVTGDGSKYGVM-DRTTATGADPV-DVAKDILKAV 265
Query: 258 CR 259
C+
Sbjct: 266 CQ 267
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Putative oxidoreductase. Danio rerio (taxid: 7955) EC: 1 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q2KIJ5|KDSR_BOVIN 3-ketodihydrosphingosine reductase OS=Bos taurus GN=KDSR PE=2 SV=1 | Back alignment and function description |
|---|
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 21/172 (12%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLV------- 101
V++TG SS IG+ IA E K+ A + LVAR E++ LQ E + IN+ +V
Sbjct: 35 VVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEKHSINDKQVVLCISVDV 94
Query: 102 -----SLNNKESKA------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+ N +A VD LVN A + + FE++ + S F RL+ IN+ G+VYP+
Sbjct: 95 SQDYSQVENVIKQAQEKLGPVDMLVNCAGMSLSGKFEDL-EVSTFERLMSINYLGSVYPS 153
Query: 151 FVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201
+ + E GRVV +S L L + Y+S+K AL E+L+ E+
Sbjct: 154 RAVIATMKERRMGRVVFVSSQAGQLGLFGYTAYSSSKFALRGLAEALQMEVK 205
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Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS). Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 2 |
| >sp|Q8T197|DHRS7_DICDI Dehydrogenase/reductase SDR family protein 7-like OS=Dictyostelium discoideum GN=DDB_G0274201 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 43/232 (18%)
Query: 35 WLYNNFYSENM--------EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ- 85
++Y NF + + ++KVVIITGASS IG ++A +YA+ + +VARR ++L+
Sbjct: 32 FIYCNFIAPKLREKPESSYKNKVVIITGASSGIGAELAKKYARLGCKVTIVARRLDQLEK 91
Query: 86 --GSTIDEYNPIN---------EVTLV-SLNNKESKA------VDHLVNTASLGHTFFFE 127
S + +Y+ +N ++TL+ N K +D V A G F
Sbjct: 92 VKSSFLKDYSRVNDDDILVIKGDLTLIDDCKNMVEKVIEKWSKIDICVWNAGSGSLIEFS 151
Query: 128 EVT-DTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186
++ D SI+ +++N++ V T + YL +S+G ++V +S+ + Y+S+K
Sbjct: 152 KLQGDISIYRDNMELNYFSLVNCTHLVYKYLEQSHGSIIVISSLAGKFGTALRTSYSSSK 211
Query: 187 AALVTFYESLRFELNDEVGITIATHGWI--------------GIEMTKGKFM 224
A++ F+ SLR E + + ITI G+I +E KG FM
Sbjct: 212 HAVMGFFNSLRNETKN-IQITIVCPGFILTEFHDNLKTLDGKQVERNKGNFM 262
|
Putative oxidoreductase. Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 1 EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 349 | ||||||
| 449447595 | 360 | PREDICTED: hydroxysteroid 11-beta-dehydr | 0.954 | 0.925 | 0.710 | 1e-141 | |
| 225460181 | 354 | PREDICTED: hydroxysteroid 11-beta-dehydr | 0.916 | 0.903 | 0.724 | 1e-137 | |
| 255574255 | 352 | Corticosteroid 11-beta-dehydrogenase, pu | 0.951 | 0.943 | 0.675 | 1e-137 | |
| 61658208 | 356 | STO-1 [Coffea canephora] | 0.965 | 0.946 | 0.667 | 1e-136 | |
| 21311775 | 362 | steroleosin-B [Sesamum indicum] | 0.982 | 0.947 | 0.653 | 1e-135 | |
| 152032028 | 353 | steroleosin-B [Arachis hypogaea] | 0.945 | 0.934 | 0.694 | 1e-135 | |
| 359806527 | 355 | uncharacterized protein LOC100780731 [Gl | 0.928 | 0.912 | 0.698 | 1e-134 | |
| 224145062 | 352 | predicted protein [Populus trichocarpa] | 0.911 | 0.903 | 0.693 | 1e-133 | |
| 357481331 | 371 | Hydroxysteroid 11-beta-dehydrogenase 1-l | 0.971 | 0.913 | 0.672 | 1e-132 | |
| 224136115 | 326 | predicted protein [Populus trichocarpa] | 0.888 | 0.950 | 0.707 | 1e-132 |
| >gi|449447595|ref|XP_004141553.1| PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein-like [Cucumis sativus] gi|449506828|ref|XP_004162860.1| PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/352 (71%), Positives = 293/352 (83%), Gaps = 19/352 (5%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
M+L+NSFLN+VVPPASL M+AF+WPAL F++ CEW+YN+F +E+MEDKVVIITGASS IG
Sbjct: 1 MELINSFLNVVVPPASLFMLAFSWPALSFISACEWIYNSFNTEDMEDKVVIITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQ---------GS------TIDEYNPINEVTLVSLNN 105
EQIAYEYAKRKANL+LVARRENRL+ G+ D + VS
Sbjct: 61 EQIAYEYAKRKANLMLVARRENRLRMISENARFIGAKRVLIMAADVVKEDDCRRFVSETI 120
Query: 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
+ VDHLVNTASLGHTF+FEEVTDTSIFP L+DINFWGNVYPT VALPYL +SNGRV+
Sbjct: 121 QYFGRVDHLVNTASLGHTFYFEEVTDTSIFPHLMDINFWGNVYPTLVALPYLRQSNGRVI 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
VNASVE WLPLPRMSLY++AKAALV FYE+LRFE+ D+VGITIATHGWIG EMT+GKFM+
Sbjct: 181 VNASVETWLPLPRMSLYSAAKAALVNFYETLRFEVKDDVGITIATHGWIGSEMTRGKFMV 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLN 285
E+GAEMQ KEEREVHVAGGPVE+FA+LIVSGACRG+TYVK+PSWYDVFLLYR+FAP+VLN
Sbjct: 241 EEGAEMQRKEEREVHVAGGPVEEFAKLIVSGACRGNTYVKYPSWYDVFLLYRMFAPNVLN 300
Query: 286 WTFRLLISSEGARRTSLIGTGRPLLEGPPA-RPRLEGTSPRQVL---SSPSS 333
WTFR L+S+ G+RRTSL+GTG P+ EG + RP LEG SPR++L +SP S
Sbjct: 301 WTFRFLLSANGSRRTSLVGTGMPVYEGSASGRPVLEGASPRRLLLPANSPQS 352
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225460181|ref|XP_002279316.1| PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein [Vitis vinifera] gi|297741043|emb|CBI31355.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/337 (72%), Positives = 276/337 (81%), Gaps = 17/337 (5%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MDL+NS LNLVVPPASLVM+AFAWPAL F+N CEW+YN YSENMEDKVVIITGASS IG
Sbjct: 1 MDLINSLLNLVVPPASLVMLAFAWPALSFINACEWVYNTLYSENMEDKVVIITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQGSTID------EYNPINEVTLVSLNNKES------ 108
EQ+AYEYAK+ A LVLVARRENRL G + ++ I +V L++
Sbjct: 61 EQVAYEYAKKGAKLVLVARRENRLLGIGENARQLGAKHVMIMAADVVKLDDCRRFVTETV 120
Query: 109 ---KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
VDHLVNTASLGHTF+FEE DTS+FP L+DINFWGNVYPT+VALP+L +SNGRV+
Sbjct: 121 NYYGRVDHLVNTASLGHTFYFEEAIDTSVFPPLMDINFWGNVYPTYVALPFLRQSNGRVI 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
VNASVENWLPLPRMSLYA+AKAAL+ FYE+LRFE EVGITIATHGWIG +MT+GKFML
Sbjct: 181 VNASVENWLPLPRMSLYAAAKAALINFYETLRFEAK-EVGITIATHGWIGSDMTRGKFML 239
Query: 226 EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLN 285
EDGAEMQWKEEREV V GGPVE+FARL+V+GACRGD YVK+PSWYD+FLLYRVFAP+VL
Sbjct: 240 EDGAEMQWKEEREVQVTGGPVEEFARLMVAGACRGDAYVKYPSWYDIFLLYRVFAPNVLG 299
Query: 286 WTFRLLISSEGARR-TSLIGTGRPLLEGPPARPRLEG 321
WTFRLL+S+ GARR TSLIGTGRPLLE P L G
Sbjct: 300 WTFRLLLSTNGARRSTSLIGTGRPLLESIPPPKLLTG 336
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574255|ref|XP_002528042.1| Corticosteroid 11-beta-dehydrogenase, putative [Ricinus communis] gi|223532572|gb|EEF34360.1| Corticosteroid 11-beta-dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust.
Identities = 241/357 (67%), Positives = 284/357 (79%), Gaps = 25/357 (7%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MDL+NS +N VVPPASLVM+A +WPAL F+N CEWLY ++YSE+MEDKVVIITGASS IG
Sbjct: 1 MDLINSVMNWVVPPASLVMLACSWPALFFINTCEWLYRSYYSEDMEDKVVIITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQGSTIDE--YNPINEVTLVSLNNKESKA-------- 110
EQIAYEYAKRKANLVL+ARRE RL+G + + + + + + KE
Sbjct: 61 EQIAYEYAKRKANLVLIARREQRLRGISEKARLFGAKHVMIMAADVVKEDDCRRFVEETI 120
Query: 111 -----VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
VDHLVNTASLGHTF+ EEV DTS+FP LLDINFWGNVYPT VALPYLH++NGR++
Sbjct: 121 NFYGRVDHLVNTASLGHTFYVEEVLDTSVFPHLLDINFWGNVYPTVVALPYLHQTNGRII 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
VNA+V+NWLPLPRMSLYA+AKAALV FYESLRFELN ++GITIATHGWIG EM++G+F L
Sbjct: 181 VNAAVQNWLPLPRMSLYAAAKAALVNFYESLRFELNGDIGITIATHGWIGSEMSRGRFRL 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLN 285
E+GAEMQW EEREV +GGPVE++A+LIVSGACRGD YVKFPSWYDVFLLYR FAP+VLN
Sbjct: 241 EEGAEMQWIEEREVQASGGPVEEYAKLIVSGACRGDRYVKFPSWYDVFLLYREFAPNVLN 300
Query: 286 WTFRLLISSEGARRTSLIGTGRPLLEGPPARPRLEGTSPRQVLSSPSSFFSQYSPSS 342
WT LL++ GARRTSL+GTGRPL+EG P PR+ L+ P + FSQ SP
Sbjct: 301 WTLHLLLAGHGARRTSLVGTGRPLIEGSP---------PRKFLTGPIT-FSQLSPQQ 347
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|61658208|gb|AAX49394.1| STO-1 [Coffea canephora] | Back alignment and taxonomy information |
|---|
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/352 (66%), Positives = 276/352 (78%), Gaps = 15/352 (4%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MDL+NS LNLVVPPASL+M+AFAWP L F+N CEWLYN ++SE M++KVV+ITGASS IG
Sbjct: 1 MDLINSVLNLVVPPASLLMLAFAWPTLSFINACEWLYNTYFSEEMDNKVVVITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--KESKA-------- 110
EQIAYEYAKR ANLVLVARR+NRL G + + L+ + KE
Sbjct: 61 EQIAYEYAKRGANLVLVARRDNRLHGIADNAQRLGSRHVLIMAADVVKEEDCRRFINETI 120
Query: 111 -----VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
VDHLVNTASLGHTFFFEE TD S+FP LLDINFWGNVYPT+VALPYL ++NGR+V
Sbjct: 121 NYFGCVDHLVNTASLGHTFFFEEATDASVFPILLDINFWGNVYPTYVALPYLRQTNGRIV 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
VNAS+ENWLPLPRMSLY++AKAAL+ FYE+LRFE+ DEVGITIATHGWIG EMT+G+FM+
Sbjct: 181 VNASIENWLPLPRMSLYSAAKAALINFYETLRFEVKDEVGITIATHGWIGTEMTRGRFMV 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLN 285
E+GAEMQWKEEREV V GGP EDFA+LIV+GACR YVK+PSWYD+F ++RVF+P+VL
Sbjct: 241 EEGAEMQWKEEREVQVTGGPAEDFAKLIVAGACRQAAYVKYPSWYDIFFVFRVFSPNVLY 300
Query: 286 WTFRLLISSEGARRTSLIGTGRPLLEGPPARPRLEGTSPRQVLSSPSSFFSQ 337
WTF LL +S +RRTS IGTGRPLLEG P R L G SP S + + Q
Sbjct: 301 WTFHLLSTSHVSRRTSFIGTGRPLLEGSPPRKLLTGASPGTSSQSQAPVYQQ 352
|
Source: Coffea canephora Species: Coffea canephora Genus: Coffea Family: Rubiaceae Order: Gentianales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21311775|gb|AAM46847.1|AF498264_1 steroleosin-B [Sesamum indicum] | Back alignment and taxonomy information |
|---|
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/361 (65%), Positives = 285/361 (78%), Gaps = 18/361 (4%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFY-SENMEDKVVIITGASSDI 59
MDL+NS LN VVPPASL+M+AF WP L F+ CEWLYN + SENME+KVV+ITGASS I
Sbjct: 1 MDLINSLLNFVVPPASLLMLAFTWPTLFFITTCEWLYNTYLNSENMENKVVLITGASSGI 60
Query: 60 GEQIAYEYAKRKANLVLVARRENRLQGSTID--EYNPINEVTLVSLNNKESKA------- 110
GEQIAY+YAKR ANLVLVARRE+RL+G + + N + + + KE +
Sbjct: 61 GEQIAYQYAKRGANLVLVARREHRLRGISENARRLGAPNVLIMAADVVKEEECRRFINET 120
Query: 111 ------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRV 164
VDHLVNT SLGHTF+FEE +D+S+FP L+DINFWGNVYPT+VALPYL ESNGR+
Sbjct: 121 INYYGRVDHLVNTVSLGHTFYFEEASDSSVFPILMDINFWGNVYPTYVALPYLRESNGRI 180
Query: 165 VVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFM 224
+VNASVENWLPLPRMSLY++AK+AL+ FYE+LRFE+ +EVGIT+ATHGWIG EMT+GKFM
Sbjct: 181 IVNASVENWLPLPRMSLYSAAKSALINFYETLRFEVKNEVGITVATHGWIGTEMTRGKFM 240
Query: 225 LEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVL 284
+E+GAEMQWKEEREVHV GGPVE+FA+ IVSGACRGD YVK+PSWYD+F LYRVFAP VL
Sbjct: 241 VEEGAEMQWKEEREVHVTGGPVEEFAKQIVSGACRGDPYVKYPSWYDIFFLYRVFAPKVL 300
Query: 285 NWTFRLLISSEGARRTSLIGTGRPLLE--GPPARPRLEGTSPRQVLSSPSSFFSQYSPSS 342
+WTFR L+++ GARRTS IGTGRPLLE P +EG+SPR++ P +F +
Sbjct: 301 DWTFRFLLTNGGARRTSFIGTGRPLLETSSPRRSAVMEGSSPRRLPPGPLTFSPAFQQQK 360
Query: 343 S 343
S
Sbjct: 361 S 361
|
Source: Sesamum indicum Species: Sesamum indicum Genus: Sesamum Family: Pedaliaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|152032028|gb|ABS28873.1| steroleosin-B [Arachis hypogaea] | Back alignment and taxonomy information |
|---|
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/350 (69%), Positives = 281/350 (80%), Gaps = 20/350 (5%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MDL+NS LNL VPPASL+ +AF+WPALCF + CEWLYN Y +NM+ KVVIITGASS IG
Sbjct: 1 MDLINSVLNLFVPPASLITLAFSWPALCFPHACEWLYNTVYGDNMDGKVVIITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLNN-KESKA-------- 110
EQIAYEYA R+A LVLVARRE+RL+G + V +V+ + KE +
Sbjct: 61 EQIAYEYALRRACLVLVARREHRLRGIAENARRMGARHVMIVAADVVKEDECRRFVNETI 120
Query: 111 -----VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
VDHLVNT SLGHTF+FEEVTDTS+FP LLDINFWGN+YPT VALPYLH +NGRV+
Sbjct: 121 NFYGRVDHLVNTVSLGHTFYFEEVTDTSVFPVLLDINFWGNIYPTLVALPYLHRTNGRVI 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
+NASVE+WLPLPRMSLYA+AKAALV FYE+LRFEL DEVG+TIATHGWIG EMT GKFML
Sbjct: 181 INASVESWLPLPRMSLYAAAKAALVNFYETLRFELRDEVGVTIATHGWIGSEMTSGKFML 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLN 285
E+GAEMQWKEERE++V GGPVE+FARL+V+GACRGD YVK+PSWYDVFLLYRVFAP+VLN
Sbjct: 241 EEGAEMQWKEEREMNVIGGPVEEFARLMVAGACRGDAYVKYPSWYDVFLLYRVFAPNVLN 300
Query: 286 WTFRLLISSEGARRT-SLIGTGRPLLEGPPARPRLEGTSPRQVLSSPSSF 334
W FRLLI+ +G +RT S +GTGR LEG RP LE SPR L +P SF
Sbjct: 301 WAFRLLIAPQGTKRTSSYVGTGRS-LEG---RPMLEAPSPRTALLAPYSF 346
|
Source: Arachis hypogaea Species: Arachis hypogaea Genus: Arachis Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359806527|ref|NP_001241259.1| uncharacterized protein LOC100780731 [Glycine max] gi|255635339|gb|ACU18023.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/342 (69%), Positives = 273/342 (79%), Gaps = 18/342 (5%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MD LN LNL+VPP S++ +AF+WPALCF+N CEWLYN+ Y E++++KVVIITGASS IG
Sbjct: 1 MDFLNFMLNLLVPPGSMLTLAFSWPALCFLNVCEWLYNSIYGEDIDNKVVIITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQG------------STIDEYNPINEVTLVSLNNKES 108
EQIAYEYA R+ANL LVARRE+RL+G I + + E N+
Sbjct: 61 EQIAYEYALRRANLTLVARREHRLRGIAENAKRLGARHVMIMAADVVKEEDCRRFVNETI 120
Query: 109 KA---VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
VDHLVNT SLGHTF FEEVTDTS+FP LLDINFWGNVYPTFVALPYLH+SNGR++
Sbjct: 121 NVFGRVDHLVNTVSLGHTFCFEEVTDTSVFPVLLDINFWGNVYPTFVALPYLHQSNGRII 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
+NASVE+WLP+PRMSLYA+AKAALV FYE+LRFEL DEVGITIATHGWIG EMT+GKFML
Sbjct: 181 INASVESWLPMPRMSLYAAAKAALVNFYETLRFELKDEVGITIATHGWIGSEMTRGKFML 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLN 285
E+GAEMQWKEEREVHV GGPVE+FARLIVSGACRGD YVKFPSWYDVFLLYRVFAP VLN
Sbjct: 241 EEGAEMQWKEEREVHVMGGPVEEFARLIVSGACRGDAYVKFPSWYDVFLLYRVFAPRVLN 300
Query: 286 WTFRLLISSEGARR-TSLIGTGRPLLEGPPARP--RLEGTSP 324
W FR LIS +G RR +S +GTG+ + RP LEGTSP
Sbjct: 301 WAFRFLISPQGTRRASSYVGTGKHIEAVGMVRPMAMLEGTSP 342
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224145062|ref|XP_002325513.1| predicted protein [Populus trichocarpa] gi|222862388|gb|EEE99894.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/333 (69%), Positives = 270/333 (81%), Gaps = 15/333 (4%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MD +N LN VVPPASLVM+A +WPALCF+N CEWLY +FYSENMEDKVVIITGASS IG
Sbjct: 1 MDFINCVLNWVVPPASLVMLACSWPALCFINTCEWLYKSFYSENMEDKVVIITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPINEVTLVSLN-NKESKA-------- 110
EQIAYEYAKR+ NLVL+ARRE+RL+G Y +V +++ + KE
Sbjct: 61 EQIAYEYAKRRVNLVLIARREHRLRGIREKARYIGAKQVMIMAADVVKEDDCRRFVNETI 120
Query: 111 -----VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
VDHLVNTASLGHTF+FEEV DTS+ LLDINFWGNVYPT+VALPY+H+SNGRVV
Sbjct: 121 SHFGRVDHLVNTASLGHTFYFEEVGDTSVLKHLLDINFWGNVYPTYVALPYIHQSNGRVV 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
VNA+VE+WLPLPRMSLYA+AKAALV FYESLRFE+N E+GITIATHGWIG EM +GKFM
Sbjct: 181 VNAAVESWLPLPRMSLYAAAKAALVNFYESLRFEVNGEIGITIATHGWIGSEMGRGKFMQ 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLN 285
EDGAEM WKEEREV+ GGPVED+AR +VSGACRGD +VK+PSWYDVFLLYR+FAP +LN
Sbjct: 241 EDGAEMLWKEEREVNGTGGPVEDYARRMVSGACRGDQFVKYPSWYDVFLLYRMFAPGLLN 300
Query: 286 WTFRLLISSEGARRTSLIGTGRPLLEGPPARPR 318
WT R+L++S G+RR SL GT RP+ EG + P+
Sbjct: 301 WTLRMLLASHGSRRMSLAGTERPIFEGSSSPPK 333
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357481331|ref|XP_003610951.1| Hydroxysteroid 11-beta-dehydrogenase 1-like protein [Medicago truncatula] gi|355512286|gb|AES93909.1| Hydroxysteroid 11-beta-dehydrogenase 1-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/363 (67%), Positives = 279/363 (76%), Gaps = 24/363 (6%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MD LN LNL VPPASL+ +AF+WPALCF+N CEWL+N Y E+M+ KVVIITGASS IG
Sbjct: 1 MDFLNFLLNLFVPPASLITLAFSWPALCFLNACEWLFNYNYGEDMDSKVVIITGASSAIG 60
Query: 61 E-----QIAYEYAKRKANLVLVARRENRLQG------------STIDEYNPINEVTLVSL 103
E QIAYEYA R+ANL+LVARRE+RL G I + + E
Sbjct: 61 EASCQNQIAYEYAIRRANLMLVARREHRLIGIAENARRMGARHVMIMAADVVKEDDCRRF 120
Query: 104 NNKESKA---VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES 160
N+ VDHLVNT SLGHTF+FEEVTDTS+FP LLDINFWGNVYPT VALPYLH+S
Sbjct: 121 VNETINVFGRVDHLVNTVSLGHTFYFEEVTDTSVFPVLLDINFWGNVYPTLVALPYLHQS 180
Query: 161 NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTK 220
NGRV++NASVE+WLPLPRMSL+ +AKAALV FYE+LRFEL DEVG+TIATHGWIG EMT+
Sbjct: 181 NGRVIINASVESWLPLPRMSLFGAAKAALVNFYETLRFELKDEVGVTIATHGWIGSEMTR 240
Query: 221 GKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFA 280
GKFMLE+GA+MQWKEERE+HV+G VE+FARLIVSGACRGD YVKFPSWYDVFLLYRVFA
Sbjct: 241 GKFMLEEGADMQWKEEREMHVSGEAVEEFARLIVSGACRGDAYVKFPSWYDVFLLYRVFA 300
Query: 281 PHVLNWTFRLLISSEGARR-TSLIGTGRPL--LEGPPARPRLEGTSPRQVLSS-PSSFFS 336
P+VLNW FRLLIS +G RR +S +GTGR L + G RP LEGTSPR P +F
Sbjct: 301 PNVLNWAFRLLISPQGTRRFSSYLGTGRSLDTVTGGMGRPMLEGTSPRHHTGMVPLTFSG 360
Query: 337 QYS 339
Q S
Sbjct: 361 QLS 363
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224136115|ref|XP_002327384.1| predicted protein [Populus trichocarpa] gi|222835754|gb|EEE74189.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/325 (70%), Positives = 270/325 (83%), Gaps = 15/325 (4%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
M +NS L+ VVPPASLVM+A +WPALCF+N CEWLY +F+SE+MEDKVVIITGASS IG
Sbjct: 1 MSFINSVLDWVVPPASLVMLACSWPALCFINTCEWLYRSFFSEDMEDKVVIITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPINEVTLVSLNN-KESKA-------- 110
EQIAYEYAKRKA LVL+ARRE+RL+G S Y V +++ + KE
Sbjct: 61 EQIAYEYAKRKAILVLIARREHRLRGVSEKARYIGAKRVLIMAADVVKEDDCRRFVNETI 120
Query: 111 -----VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
VDHLVNTASLGHTF+FEEV DTS+FP LDINFWGNVYPT+VALPYL +SNGRVV
Sbjct: 121 NYFGRVDHLVNTASLGHTFYFEEVGDTSVFPHFLDINFWGNVYPTYVALPYLRQSNGRVV 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
VNA+VE+WLPLPRMSLYA+AKAALV+FYESLRFE+N EVGITIA+HGWIG EM++GKFML
Sbjct: 181 VNAAVESWLPLPRMSLYAAAKAALVSFYESLRFEVNGEVGITIASHGWIGSEMSRGKFML 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLN 285
EDGAEMQWKEEREV+ GGPVED+A++IVSGACRG YVK+PSWYD+FLLYR+FAP +LN
Sbjct: 241 EDGAEMQWKEEREVNGTGGPVEDYAKMIVSGACRGHQYVKYPSWYDIFLLYRMFAPGILN 300
Query: 286 WTFRLLISSEGARRTSLIGTGRPLL 310
W R+L++ G+RRTS+IGTGRP L
Sbjct: 301 WALRMLLAPNGSRRTSMIGTGRPAL 325
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 349 | ||||||
| TAIR|locus:2140553 | 389 | HSD5 "hydroxysteroid dehydroge | 0.931 | 0.835 | 0.668 | 8.8e-118 | |
| TAIR|locus:2159747 | 349 | HSD1 "hydroxysteroid dehydroge | 0.928 | 0.928 | 0.393 | 4.3e-54 | |
| TAIR|locus:2832487 | 349 | HSD1 "hydroxysteroid dehydroge | 0.928 | 0.928 | 0.393 | 4.3e-54 | |
| TAIR|locus:2163315 | 342 | HSD6 "hydroxysteroid dehydroge | 0.836 | 0.853 | 0.377 | 6.9e-47 | |
| TAIR|locus:2159737 | 299 | HSD4 "hydroxysteroid dehydroge | 0.770 | 0.899 | 0.371 | 3.2e-42 | |
| TAIR|locus:2832482 | 299 | HSD7 "hydroxysteroid dehydroge | 0.770 | 0.899 | 0.371 | 3.2e-42 | |
| TAIR|locus:2099515 | 309 | HSD3 "hydroxysteroid dehydroge | 0.816 | 0.922 | 0.346 | 8.4e-42 | |
| TAIR|locus:2099510 | 321 | HSD2 "hydroxysteroid dehydroge | 0.633 | 0.688 | 0.384 | 1.9e-37 | |
| TIGR_CMR|SO_0438 | 267 | SO_0438 "oxidoreductase, short | 0.475 | 0.621 | 0.353 | 3.5e-20 | |
| TIGR_CMR|BA_4357 | 264 | BA_4357 "oxidoreductase, short | 0.478 | 0.632 | 0.356 | 3.5e-16 |
| TAIR|locus:2140553 HSD5 "hydroxysteroid dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 230/344 (66%), Positives = 277/344 (80%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYS-ENMEDKVVIITGASSDI 59
+DLLNS +NLV PPA++V+MAFAWP L F++ E YN++++ ENMEDKVV+ITGASS I
Sbjct: 2 VDLLNSVMNLVAPPATMVVMAFAWPLLSFISFSERAYNSYFATENMEDKVVVITGASSAI 61
Query: 60 GEQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPINEVTLVSLNN-KESKA------- 110
GEQIAYEYAKR ANLVLVARRE RL+ S + N V +++ + KE
Sbjct: 62 GEQIAYEYAKRGANLVLVARREQRLRVVSNKAKQIGANHVIIIAADVIKEDDCRRFITQA 121
Query: 111 ------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRV 164
VDHLVNTASLGHTF+FEEV+DT++FP LLDINFWGNVYPT+VALPYLH++NGR+
Sbjct: 122 VNYYGRVDHLVNTASLGHTFYFEEVSDTTVFPHLLDINFWGNVYPTYVALPYLHQTNGRI 181
Query: 165 VVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFM 224
VVNASVENWLPLPRMSLY++AKAALV FYE+LRFELN +VGITIATHGWIG EM+ GKFM
Sbjct: 182 VVNASVENWLPLPRMSLYSAAKAALVNFYETLRFELNGDVGITIATHGWIGSEMSGGKFM 241
Query: 225 LEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVL 284
LE+GAEMQWKEEREV GGP+E+FA++IV+GACRGD YVKFP+WYDVFLLYRVF P+VL
Sbjct: 242 LEEGAEMQWKEEREVPANGGPLEEFAKMIVAGACRGDAYVKFPNWYDVFLLYRVFTPNVL 301
Query: 285 NWTFRLLISSEGARRTSLIG--TGRPLLEGPPA-RPRLEGTSPR 325
WTF+LL+S+EG RR+SL+G +G P+ E + LEG PR
Sbjct: 302 RWTFKLLLSTEGTRRSSLVGVGSGMPVDESSSQMKLMLEGGPPR 345
|
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| TAIR|locus:2159747 HSD1 "hydroxysteroid dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 135/343 (39%), Positives = 191/343 (55%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
M+L+N FLNL P + + F P F + +++ +SEN+ KVV+ITGASS IG
Sbjct: 1 MELINDFLNLTAPFFTFFGLCFFLPPFYFFKFLQSIFSTIFSENLYGKVVLITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTL---VSLNNKESKAVD--- 112
EQ+AYEYA R A L L ARR+NRL+ E N VT+ VS + + VD
Sbjct: 61 EQLAYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHADVSKPDDCRRIVDDTI 120
Query: 113 -------HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
HLVN A + FE + D + +LD NFWG+VY T ALPYL +SNG++V
Sbjct: 121 THFGRLDHLVNNAGMTQISMFENIEDITRTKAVLDTNFWGSVYTTRAALPYLRQSNGKIV 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
+S WL PRMS Y ++KAAL++F+E++R EL +V ITI T G+I E+T+GK+
Sbjct: 181 AMSSSAAWLTAPRMSFYNASKAALLSFFETMRIELGGDVHITIVTPGYIESELTQGKYFS 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDF---ARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPH 282
+G + ++ R+V V PV A+ IV+G CR YV PSW+ V L++V P
Sbjct: 241 GEGELIVNQDMRDVQVGPFPVASASGCAKSIVNGVCRKQRYVTEPSWFKVTYLWKVLCPE 300
Query: 283 VLNWTFRLLISSEGARRTSLIGTGRPLLEGPPARPRLEGTSPR 325
++ W RLL + G + + +++ P R L S R
Sbjct: 301 LIEWGCRLLYMT-GTGMSEDTALNKRIMDIPGVRSTLYPESIR 342
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| TAIR|locus:2832487 HSD1 "hydroxysteroid dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 135/343 (39%), Positives = 191/343 (55%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
M+L+N FLNL P + + F P F + +++ +SEN+ KVV+ITGASS IG
Sbjct: 1 MELINDFLNLTAPFFTFFGLCFFLPPFYFFKFLQSIFSTIFSENLYGKVVLITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTL---VSLNNKESKAVD--- 112
EQ+AYEYA R A L L ARR+NRL+ E N VT+ VS + + VD
Sbjct: 61 EQLAYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHADVSKPDDCRRIVDDTI 120
Query: 113 -------HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
HLVN A + FE + D + +LD NFWG+VY T ALPYL +SNG++V
Sbjct: 121 THFGRLDHLVNNAGMTQISMFENIEDITRTKAVLDTNFWGSVYTTRAALPYLRQSNGKIV 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
+S WL PRMS Y ++KAAL++F+E++R EL +V ITI T G+I E+T+GK+
Sbjct: 181 AMSSSAAWLTAPRMSFYNASKAALLSFFETMRIELGGDVHITIVTPGYIESELTQGKYFS 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDF---ARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPH 282
+G + ++ R+V V PV A+ IV+G CR YV PSW+ V L++V P
Sbjct: 241 GEGELIVNQDMRDVQVGPFPVASASGCAKSIVNGVCRKQRYVTEPSWFKVTYLWKVLCPE 300
Query: 283 VLNWTFRLLISSEGARRTSLIGTGRPLLEGPPARPRLEGTSPR 325
++ W RLL + G + + +++ P R L S R
Sbjct: 301 LIEWGCRLLYMT-GTGMSEDTALNKRIMDIPGVRSTLYPESIR 342
|
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| TAIR|locus:2163315 HSD6 "hydroxysteroid dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 117/310 (37%), Positives = 170/310 (54%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MD +N +N + P +L + +P + + N +SEN+ KVV+ITGA+S IG
Sbjct: 1 MDSINKIINFLFPLLTLYALLVFYPTYQRLKSAVSICRNLFSENVAGKVVVITGAASGIG 60
Query: 61 EQIAYEYAKRKANLVLV-ARRENRLQGSTIDE-YNPINEVTLVS----LNNKES--KA-- 110
E +AYEY KR A L LV R E + + E Y + LV+ L + E +A
Sbjct: 61 EALAYEYGKRGAYLALVDIRGEPLFHVAALAELYGSPEVLPLVADVSKLQDCERFIRATV 120
Query: 111 -----VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
+DHLV A + +FF ++ D S +DINFWG+VY TF A PYL + GR+V
Sbjct: 121 LHFGRLDHLVTNAGVAPLYFFADIEDVSKASPAMDINFWGSVYCTFFASPYLKKFRGRIV 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
V AS ++ PR+S Y ++KAA++ FYE+LR E ++G+TI G + EM++GKFM
Sbjct: 181 VIASGCGYIASPRLSFYCASKAAVIAFYETLRTEFGSDIGVTIVAPGIVDSEMSRGKFMT 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDF---ARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPH 282
+DG + KE R+V ++ PVE A+ I+ CRGD Y+ P W +L +VF
Sbjct: 241 KDGKLVVDKELRDVQMSVLPVESAERCAKAIMRSVCRGDRYLLEPDWIGCVILLKVFCSE 300
Query: 283 VLNWTFRLLI 292
W R L+
Sbjct: 301 ATEWVARWLL 310
|
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| TAIR|locus:2159737 HSD4 "hydroxysteroid dehydrogenase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 114/307 (37%), Positives = 166/307 (54%)
Query: 1 MDLLNSFLNLVVPPAS----LVMMAFA--WPALCFVNGCEWLYNNFYSENMEDKVVIITG 54
MDL N N+++P + LV M F+ + L F+ GC+ SE + KVVIITG
Sbjct: 1 MDLNNKIFNILLPIVTVSFLLVFMPFSIFFKLLQFIRGCK------ESEKVNGKVVIITG 54
Query: 55 ASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-----KESK 109
+SS IGE +AYEYA+R A L LVARRE+RLQ D + + + K+ K
Sbjct: 55 SSSGIGEHLAYEYARRGAYLTLVARREDRLQ-VVADRCRKLGSPDVAVVRGDVSVIKDCK 113
Query: 110 A-----------VDHLVNTASLGHTFFFEEVTDTS-IFPRLLDINFWGNVYPTFVALPYL 157
+DHLVN A + FFE+ ++ S + P +++ NFWG VY T A+P+L
Sbjct: 114 RFVQETISRFGRLDHLVNNAGIAEAKFFEDYSEISDVLP-IVNTNFWGPVYATHFAIPHL 172
Query: 158 HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE 217
++ G+++ AS W +PRMS+YA++KAA++ FYE+LR EL+ EVG+TI G I
Sbjct: 173 KKTKGKIIAVASPAGWSGVPRMSIYAASKAAMINFYETLRIELHPEVGVTIVFPGLIENG 232
Query: 218 MTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYR 277
T + E + W + + A + A+ +V+G CRG T+V PSW V
Sbjct: 233 NTNPDLLAE---KQDWSQVVTIESAA----ECAKAVVNGICRGKTFVAEPSWVRVLFWLS 285
Query: 278 VFAPHVL 284
P +L
Sbjct: 286 AICPELL 292
|
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| TAIR|locus:2832482 HSD7 "hydroxysteroid dehydrogenase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 114/307 (37%), Positives = 166/307 (54%)
Query: 1 MDLLNSFLNLVVPPAS----LVMMAFA--WPALCFVNGCEWLYNNFYSENMEDKVVIITG 54
MDL N N+++P + LV M F+ + L F+ GC+ SE + KVVIITG
Sbjct: 1 MDLNNKIFNILLPIVTVSFLLVFMPFSIFFKLLQFIRGCK------ESEKVNGKVVIITG 54
Query: 55 ASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-----KESK 109
+SS IGE +AYEYA+R A L LVARRE+RLQ D + + + K+ K
Sbjct: 55 SSSGIGEHLAYEYARRGAYLTLVARREDRLQ-VVADRCRKLGSPDVAVVRGDVSVIKDCK 113
Query: 110 A-----------VDHLVNTASLGHTFFFEEVTDTS-IFPRLLDINFWGNVYPTFVALPYL 157
+DHLVN A + FFE+ ++ S + P +++ NFWG VY T A+P+L
Sbjct: 114 RFVQETISRFGRLDHLVNNAGIAEAKFFEDYSEISDVLP-IVNTNFWGPVYATHFAIPHL 172
Query: 158 HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE 217
++ G+++ AS W +PRMS+YA++KAA++ FYE+LR EL+ EVG+TI G I
Sbjct: 173 KKTKGKIIAVASPAGWSGVPRMSIYAASKAAMINFYETLRIELHPEVGVTIVFPGLIENG 232
Query: 218 MTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYR 277
T + E + W + + A + A+ +V+G CRG T+V PSW V
Sbjct: 233 NTNPDLLAE---KQDWSQVVTIESAA----ECAKAVVNGICRGKTFVAEPSWVRVLFWLS 285
Query: 278 VFAPHVL 284
P +L
Sbjct: 286 AICPELL 292
|
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| TAIR|locus:2099515 HSD3 "hydroxysteroid dehydrogenase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 107/309 (34%), Positives = 167/309 (54%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MD+L + LNL++PP +++ + +P + L N + EN+ KVV+ITGASS IG
Sbjct: 1 MDILTTILNLLLPPLTIIFLFLFYPFYLLIKLVLCLRKNLHFENVARKVVLITGASSGIG 60
Query: 61 EQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTLVS-LNNKES--KAVD--- 112
E +AYEYAK+ A L LVARR +RL+ T + N + + ++N E K +D
Sbjct: 61 EHVAYEYAKKGAYLALVARRRDRLEIVAETSRQLGSGNVIIIPGDVSNVEDCKKFIDETI 120
Query: 113 -------HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
HL+N A + T FE+ T ++DINFWG Y T+ A+P+L +S G++V
Sbjct: 121 RHFGKLDHLINNAGVFQTVLFEDFTQIQDANPIMDINFWGTTYITYFAIPHLRKSKGKIV 180
Query: 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML 225
S +PLP S+YA++KAAL+ F+E+LR EL+ ++ ITI G + +MT +
Sbjct: 181 AITSGSANIPLPLASIYAASKAALLRFFETLRIELSPDIKITIVLPGVVSTDMTTPHCIE 240
Query: 226 EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLN 285
+ G++ E V A+ I G RG+TY++ PSW + + P +++
Sbjct: 241 KYGSDFILSES---------VSKCAKAIFRGIGRGETYIEEPSWMKWLFIMKNVCPEIVD 291
Query: 286 WTFRLLISS 294
+ L S
Sbjct: 292 YGLNYLFVS 300
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| TAIR|locus:2099510 HSD2 "hydroxysteroid dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 92/239 (38%), Positives = 144/239 (60%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIG 60
MD+L++ LN ++PP ++ + +P F L + + EN+ KVV+ITGASS IG
Sbjct: 1 MDMLHTILNFLLPPLTISFLVLFYPFYLFTKLMSCL-KHLHFENVTGKVVLITGASSGIG 59
Query: 61 EQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTLV--SLNNKES--KAVD-- 112
E +AYEYAK+ A L LVARR++RL+ T + +V ++ ++N E K +D
Sbjct: 60 EHVAYEYAKKGAKLALVARRKDRLEIVAETSRQLGS-GDVIIIPGDVSNVEDCKKFIDET 118
Query: 113 --------HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRV 164
HL+N A + T FE+ T ++DINFWG+ Y T+ A+P+L +S G++
Sbjct: 119 IHHFGKLDHLINNAGVPQTVIFEDFTQIQDANSIMDINFWGSTYITYFAIPHLRKSKGKI 178
Query: 165 VVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKF 223
VV +S +PL S+Y+++KAALV F+E+LR E++ ++ ITIA G+I +MT +F
Sbjct: 179 VVISSATAIIPLQAASVYSASKAALVKFFETLRVEISPDIKITIALPGFISTDMTTPQF 237
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| TIGR_CMR|SO_0438 SO_0438 "oxidoreductase, short chain dehydrogenase/reductase family" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 64/181 (35%), Positives = 94/181 (51%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID--EYNPINEVTL 100
+ + KVVIITGAS IG +A A+ LVL AR E RL ++ Y P V
Sbjct: 2 DGLTGKVVIITGASEGIGRALAIAMARIGCQLVLSARNETRLASLALEVANYGPTPFVFA 61
Query: 101 VSLNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+++ +D LVN A + F+E+T S+ ++ +N+ G Y
Sbjct: 62 ADVSSASQCEDLIHATIAHYGRIDILVNNAGMTMWSRFDELTQLSVLEDIMRVNYLGPAY 121
Query: 149 PTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGIT 207
T ALPYL S G+VV+ ASV +P S YA++K A++ F++SLR EL +D V +T
Sbjct: 122 LTHAALPYLKSSQGQVVIVASVAGLTGVPTRSGYAASKHAVIGFFDSLRIELADDNVAVT 181
Query: 208 I 208
+
Sbjct: 182 V 182
|
|
| TIGR_CMR|BA_4357 BA_4357 "oxidoreductase, short-chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 203 (76.5 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 66/185 (35%), Positives = 101/185 (54%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDE-YN-P------ 94
+++KV++ITGASS IGEQ+A + A++ A VL+AR E +L+ I E YN P
Sbjct: 5 LQNKVIVITGASSGIGEQVAMQVAEQGATPVLMARTEEKLKALADKIKETYNTPCYYYVL 64
Query: 95 -INEVTLV-SLNNK---ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
++E T V S+ +K E +D LVN A G FE+ + + + +N +G V
Sbjct: 65 DVSEETEVQSVFSKVLQEVGRIDILVNNAGFGIFKTFEDASMDEV-KDMFQVNVFGLVAC 123
Query: 150 TFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND-EVGIT 207
T LPY+ + N G ++ AS+ + P+ S YA+ K A++ F SLR EL+ V +T
Sbjct: 124 TKAVLPYMVKRNEGHIINIASLAGKIATPKSSAYAATKHAVLGFTNSLRMELSSTNVFVT 183
Query: 208 IATHG 212
G
Sbjct: 184 AINPG 188
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00021854001 | SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (354 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 349 | |||
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 6e-44 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 4e-38 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 3e-29 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 1e-26 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 7e-26 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 8e-26 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 4e-25 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 1e-22 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 2e-22 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 5e-21 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 1e-20 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 2e-20 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 4e-19 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 8e-17 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 1e-16 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 2e-16 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 2e-16 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-15 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 2e-15 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-15 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 7e-15 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-14 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 4e-14 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 5e-14 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 6e-14 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 1e-13 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 1e-13 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 1e-13 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-13 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 2e-13 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 3e-13 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 1e-12 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 2e-12 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 3e-12 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-12 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 4e-12 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 5e-12 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 6e-12 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 6e-12 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 7e-12 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 8e-12 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 1e-11 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 1e-11 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 1e-11 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-10 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 1e-10 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 1e-10 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 2e-10 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 2e-10 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 2e-10 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 5e-10 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 5e-10 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 7e-10 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 7e-10 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 8e-10 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 1e-09 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 2e-09 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 2e-09 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 2e-09 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 2e-09 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 2e-09 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-09 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 2e-09 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 3e-09 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 4e-09 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 4e-09 | |
| PRK06101 | 240 | PRK06101, PRK06101, short chain dehydrogenase; Pro | 5e-09 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 6e-09 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 6e-09 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 6e-09 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 9e-09 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 1e-08 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 1e-08 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 2e-08 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-08 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 3e-08 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 3e-08 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 3e-08 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 6e-08 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 6e-08 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 6e-08 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 7e-08 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 8e-08 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 9e-08 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 1e-07 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 1e-07 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 1e-07 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 2e-07 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 2e-07 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 2e-07 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 2e-07 | |
| TIGR01500 | 256 | TIGR01500, sepiapter_red, sepiapterin reductase | 5e-07 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 6e-07 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 6e-07 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 6e-07 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 7e-07 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 7e-07 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 9e-07 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 9e-07 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 1e-06 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 2e-06 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 2e-06 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 2e-06 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 2e-06 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 3e-06 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 3e-06 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 3e-06 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 4e-06 | |
| cd05334 | 221 | cd05334, DHPR_SDR_c_like, dihydropteridine reducta | 4e-06 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 5e-06 | |
| cd11730 | 206 | cd11730, Tthb094_like_SDR_c, Tthb094 and related p | 5e-06 | |
| PRK07102 | 243 | PRK07102, PRK07102, short chain dehydrogenase; Pro | 5e-06 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 5e-06 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 5e-06 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 5e-06 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 6e-06 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 8e-06 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 8e-06 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 9e-06 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 1e-05 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 1e-05 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 1e-05 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-05 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 2e-05 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 2e-05 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 2e-05 | |
| PLN02780 | 320 | PLN02780, PLN02780, ketoreductase/ oxidoreductase | 2e-05 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 3e-05 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 3e-05 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 3e-05 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 4e-05 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 4e-05 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 5e-05 | |
| TIGR03325 | 262 | TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3- | 5e-05 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 6e-05 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 6e-05 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 6e-05 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 7e-05 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 7e-05 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 8e-05 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 9e-05 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 1e-04 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 1e-04 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-04 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 2e-04 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 2e-04 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 2e-04 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 2e-04 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 2e-04 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 3e-04 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-04 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 4e-04 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 4e-04 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 4e-04 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 5e-04 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 5e-04 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 6e-04 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 6e-04 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 6e-04 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 7e-04 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 8e-04 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 8e-04 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 8e-04 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 0.001 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 0.001 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 0.002 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 0.002 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 0.003 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 0.003 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 0.003 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 0.003 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 0.003 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 0.004 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 0.004 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 6e-44
Identities = 72/260 (27%), Positives = 120/260 (46%), Gaps = 22/260 (8%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---GSTIDEYNPINEVTLV 101
++ KVVIITGASS IGE++AY A+ A LVL ARRE RL+ ++ P V +
Sbjct: 1 LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60
Query: 102 SLNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
+++ E +D L+N A + F + T + +++++N++G V
Sbjct: 61 DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHD-TSIDVDRKIMEVNYFGPVAL 119
Query: 150 TFVALPYL-HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGIT 207
T ALP+L S G +VV +S+ + +P + YA++K AL F++SLR EL + +T
Sbjct: 120 TKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVT 179
Query: 208 IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFP 267
+ G I + G + + G E+ A I+ V +
Sbjct: 180 VVCPGLIDTNIAMNAL---SGDGSMSAKMDDTTANGMSPEECALEILKAIALRKREVFYA 236
Query: 268 SW-YDVFLLYRVFAPHVLNW 286
+ + R P + +W
Sbjct: 237 RQVPLLAVYLRQLFPGLFDW 256
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 4e-38
Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 18/228 (7%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK 106
KVVIITGAS IG +A A+ A LVL AR E RL + + E +V +
Sbjct: 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60
Query: 107 ESKAV--------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+++A D LVN A + F+E+TD S+F R++ +N+ G VY T
Sbjct: 61 DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHA 120
Query: 153 ALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGITIATH 211
ALP+L S G++VV +S+ +P S YA++K AL F++SLR EL +D V +T+
Sbjct: 121 ALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCP 180
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259
G++ ++ K DG + +E + E+ A I+ R
Sbjct: 181 GFVATDIRKRALD-GDGKPLGKSPMQESKIM--SAEECAEAILPAIAR 225
|
Length = 263 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 111 bits (281), Expect = 3e-29
Identities = 71/231 (30%), Positives = 98/231 (42%), Gaps = 21/231 (9%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT---------- 99
++TGASS IG IA A+ A +VL R E L E N V
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60
Query: 100 ---LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156
LV +E +D LVN A + EE+TD R+LD+N G T ALP+
Sbjct: 61 VEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWD-RVLDVNLTGVFLLTRAALPH 119
Query: 157 LHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIG 215
+ + G +VN +SV PLP + YA++KAAL SL EL GI + +
Sbjct: 120 MKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPY-GIRVNA---VA 175
Query: 216 IEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIVSGACRGDTYV 264
+ + + G E KE G G E+ A +V A +Y+
Sbjct: 176 PGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYI 226
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-26
Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST--IDEYNPINEVTL---- 100
K V+ITG SS IG+ +A E K AN+++VAR E++L+ + I+ + +
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60
Query: 101 VSLNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
L++ E D +VN A + FE++T F R +D+N++G++
Sbjct: 61 ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTA-EEFERGMDVNYFGSLN 119
Query: 149 PTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
LP + E +V +S + + S Y +K AL ESLR EL I
Sbjct: 120 VAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPY-NIR 178
Query: 208 I--------ATHGWIGIEMTK--GKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257
+ T G+ TK +E + E+ AR+IV G
Sbjct: 179 VSVVYPPDTDTPGFEEENKTKPEETKAIEGSSGPI------------TPEEAARIIVKGL 226
Query: 258 CRGDTYV 264
RG V
Sbjct: 227 DRGYDDV 233
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 7e-26
Identities = 67/270 (24%), Positives = 108/270 (40%), Gaps = 37/270 (13%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID-EYNPINEVTLVSL 103
M+ K +ITGASS IG ++A + A+R NL+LVARRE++L+ + E EV ++
Sbjct: 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63
Query: 104 NNKESKA--------------VDHLVNTASLGHTFFFEEVTDTSIFP--RLLDINFWGNV 147
+ + +A +D LVN A G F + S+ ++ +N
Sbjct: 64 DLSDPEALERLEDELKERGGPIDVLVNNAGFGT---FGPFLELSLDEEEEMIQLNILALT 120
Query: 148 YPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVG 205
T LP + E ++N S +P P M++Y++ KA +++F E+LR EL V
Sbjct: 121 RLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVK 180
Query: 206 ITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265
+T G E K ED A + +G +
Sbjct: 181 VTAVCPGPTRTEFFDAKGSDVYLLSPGEL--------VLSPEDVAEAALKALEKGKREI- 231
Query: 266 FPSWYD------VFLLYRVFAPHVLNWTFR 289
P + LL R + F+
Sbjct: 232 IPGLPNKALALSFRLLPRSLREKLAGKIFK 261
|
Length = 265 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 8e-26
Identities = 58/231 (25%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL--- 100
++ KV ++TGASS IG IA A+ A +V+ ARR +
Sbjct: 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61
Query: 101 ----VSLNNKESKA-----------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG 145
VS + + +A +D LVN A + E + R++D+N G
Sbjct: 62 VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121
Query: 146 NVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
T ALP + + R+V +SV P + YA++KAAL+ ++L EL G
Sbjct: 122 AFLLTRAALPLMKK--QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALEL-APRG 178
Query: 206 ITIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
I + G+I MT + ++ R G E+ A +
Sbjct: 179 IRVNAVAPGYIDTPMTA-ALESAELEALKRLAARIPLGRLGTPEEVAAAVA 228
|
Length = 251 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 4e-25
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKES 108
VV+ITGASS IG A +A+R A +VL AR L + E V + ++
Sbjct: 2 VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61
Query: 109 KAVDHLVNTA--SLGH--TFF----------FEEVTDTSIFPRLLDINFWGNVYPTFVAL 154
V+ +TA G T+ FE+VT F R+ D+N+ G+VY T AL
Sbjct: 62 AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEE-FRRVFDVNYLGHVYGTLAAL 120
Query: 155 PYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGITI 208
P+L G ++N S+ + P + Y+++K A+ F ESLR EL +D I++
Sbjct: 121 PHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISV 176
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-22
Identities = 63/256 (24%), Positives = 99/256 (38%), Gaps = 37/256 (14%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----- 104
V+ITGASS IG +A E+AK N+ L ARR +RL + NP V + L+
Sbjct: 1 VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60
Query: 105 ---------NKESKAVDHLVNTA--SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
E +D ++ A G + F +D N G A
Sbjct: 61 RNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKA---FRETIDTNLLGAAAILEAA 117
Query: 154 LPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGITIATH 211
LP G +V+ +SV LP + Y+++KAAL + ESLR+++ + +T+
Sbjct: 118 LPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINP 177
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFP-SWY 270
G+I +T + M + VE A+ I +G FP
Sbjct: 178 GFIDTPLT------ANMFTMPFLM---------SVEQAAKRIYKAIKKGAAEPTFPWRLA 222
Query: 271 DVFLLYRVFAPHVLNW 286
L ++ +
Sbjct: 223 VPLRLLKLLPERLRRR 238
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.1 bits (240), Expect = 2e-22
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-----NPINEVT 99
+ +VV+ITGAS+ +G A +A+R A +VL+AR E L+ E + V
Sbjct: 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEA-LAAEIRAAGGEALAVVA 64
Query: 100 LVS----LNNKESKAVDHL------VNTASLGHTFF--FEEVTDTSIFPRLLDINFWGNV 147
V+ + +A + L VN A T F FE+VT F R+ ++ + G V
Sbjct: 65 DVADAEAVQAAADRAEEELGPIDTWVNNA--MVTVFGPFEDVTPEE-FRRVTEVTYLGVV 121
Query: 148 YPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+ T AL ++ + ++ S + +P S Y +AK A+ F +SLR EL
Sbjct: 122 HGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCEL 175
|
Length = 334 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 5e-21
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL------VS 102
+V+ITG S IG +A E+AKR A +V++ + + + N + +
Sbjct: 1 IVLITGGGSGIGRLLALEFAKRGAKVVIL----DINEKGAEETANNVRKAGGKVHYYKCD 56
Query: 103 LNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
++ +E V L+N A + E+ D I + ++N + + T
Sbjct: 57 VSKREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEI-EKTFEVNTLAHFWTT 115
Query: 151 FVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN----DEVG 205
LP + E N G +V ASV + ++ Y ++KAA V F+ESLR EL +
Sbjct: 116 KAFLPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIK 175
Query: 206 ITIATHGWIGIEMTKG 221
T+ +I M +G
Sbjct: 176 TTLVCPYFINTGMFQG 191
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 89.2 bits (222), Expect = 1e-20
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE 107
KVV+ITG SS IG +A A + ++ AR ++L+ + + EV + + ++E
Sbjct: 1 KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNL-EVLELDVTDEE 59
Query: 108 S--KAV----------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155
S AV D LVN A G EE + + L ++N +G + T LP
Sbjct: 60 SIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVR-ELFEVNVFGPLRVTRAFLP 118
Query: 156 YLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+ + GR+V +SV +P P + Y ++KAAL ESLR EL
Sbjct: 119 LMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLEL 164
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 2e-20
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--N 105
KV IITG +S IG A K+ A + ++ R EN + + NP + T V + +
Sbjct: 1 KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60
Query: 106 KES------------KAVDHLVNTASLG--HTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
E VD L+N A + ++ F + +D+N G + T+
Sbjct: 61 WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWE-KTIDVNLTGVINTTY 119
Query: 152 VALPYL----HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
+AL Y+ G +V SV P P+ +Y+++K +V F SL L + G+
Sbjct: 120 LALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVR 179
Query: 208 IAT 210
+
Sbjct: 180 VNA 182
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 4e-19
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLV 101
++ KV +ITGASS IGE A A+ A +VL ARRE RL+ + DE + L
Sbjct: 1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLE-ALADEIGAGAALALA 59
Query: 102 -SLNNKES------------KAVDHLVNTA--SLGHTFFFEEVTDTSI--FPRLLDINFW 144
+ ++ + +D LVN A +LG + + + + + R++D N
Sbjct: 60 LDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG-----DPLDEADLDDWDRMIDTNVK 114
Query: 145 GNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
G + T LP + E ++N S+ P P ++Y + KAA+ F LR EL
Sbjct: 115 GLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQEL 171
|
Length = 246 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 8e-17
Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 34/233 (14%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTI------ 89
++ KV ++TGASS IGE A A A + + ARR +RL+ G
Sbjct: 1 LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60
Query: 90 --DEYNPINEV--TLVSLNNKESKAVDHLVNTASLGHTFFFEEVT--DTSIFPRLLDINF 143
DE V T+ +L +D LVN A + V DT+ + R++D N
Sbjct: 61 VTDEQQVDAAVERTVEALGR-----LDILVNNAGIM---LLGPVEDADTTDWTRMIDTNL 112
Query: 144 WGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELN- 201
G +Y T ALP+ N +VN +SV + + ++Y + K + F E LR E+
Sbjct: 113 LGLMYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTE 172
Query: 202 DEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
V + + G + E+ + + EER + ED A +
Sbjct: 173 RGVRVVVIEPGTVDTELRD---HITHTITKEAYEERISTIRKLQAEDIAAAVR 222
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 1e-16
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 27/243 (11%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYN-PINEVTLV 101
+ KV IITG+SS IG A +A+ A L L R RL+ + + ++ LV
Sbjct: 1 LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60
Query: 102 SLNNKESKAVDHLVNTASLGHTFFF---------------EEVTDTSI--FPRLLDINFW 144
+ E + D +++T L F D I + +++++N
Sbjct: 61 VADLTEEEGQDRIISTT-LAK---FGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLR 116
Query: 145 GNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE- 203
+Y T +A+P+L ++ G +V +SV P + Y +KAAL F EL +
Sbjct: 117 AVIYLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKG 176
Query: 204 VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIVSGACRGD 261
V + + G I + M E+ +E H G G V++ A I A
Sbjct: 177 VRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDAS 236
Query: 262 TYV 264
+++
Sbjct: 237 SFI 239
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 2e-16
Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 13/174 (7%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY----------NPINE 97
KV ++TGAS IG +IA A+ + L R L + +P +
Sbjct: 1 KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPYDARDPEDA 60
Query: 98 VTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL 157
LV +D LV+ A +G E +D + IN T LP L
Sbjct: 61 RALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAEL-EAHFSINVIAPAELTRALLPAL 119
Query: 158 HES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT 210
E+ +GRVV S+ L + Y+++K AL +LR E D G+ ++
Sbjct: 120 REAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDH-GVRVSA 172
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-16
Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 33/224 (14%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST---IDEYNPINEVTLV 101
++DK V++TGA+ IG+ A V A R+ GS + +Y ++V +
Sbjct: 1 IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRD---PGSAAHLVAKY--GDKVVPL 55
Query: 102 SLN--NKES--------KAVDHLVNTASLG--HTFFFEEVTDTSIFPRLLDINFWGNVYP 149
L+ + ES K VD ++N A + T E + +D+N +G +
Sbjct: 56 RLDVTDPESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQE--MDVNVFGLLRL 113
Query: 150 TFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
P L + G +VN SV + P M Y+++K+A + + LR EL + + +
Sbjct: 114 AQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVL 173
Query: 209 ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFAR 251
+ H G I M G ++ E VA ++
Sbjct: 174 SVHPGPIDTRMAAGAGGPKESPE---------TVAEAVLKALKA 208
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 1e-15
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 28/234 (11%)
Query: 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANL-VLVARREN-----RLQGSTIDEYNP 94
YS + KV +ITG + IG IA + + A + VL EN R +G + +
Sbjct: 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDV 60
Query: 95 INEVTLVSLNN---KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
N + KE VD LVN A + + FEE D + +++ IN G +Y T+
Sbjct: 61 GNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEF-DEEKYNKMIKINLNGAIYTTY 119
Query: 152 VALPYLHESNGRVVVN--------ASVENWLPLPRMSLYASAKAALVTFYESLRFELND- 202
LP L S +VN + E + YA KA ++ L FEL
Sbjct: 120 EFLPLLKLSKNGAIVNIASNAGIGTAAEG------TTFYAITKAGIIILTRRLAFELGKY 173
Query: 203 EVGITIATHGWIGIEMTKGKFMLEDGAEM-QWKEEREV-HVAGGPVEDFARLIV 254
+ + GW+ +MT E+ ++ + + V G P ED A +++
Sbjct: 174 GIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKP-EDIANIVL 226
|
Length = 255 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.9 bits (185), Expect = 2e-15
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
KV ++TGASS IG A + A+ + +R R PI V L+ L
Sbjct: 1 MSNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA--------PIPGVELLEL 52
Query: 104 --NNKESKA------------VDHLVNTASLGHTFFFEEVTDTSIFP--RLLDINFWGNV 147
+ S +D LVN A +G EE +SI L D N +G +
Sbjct: 53 DVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEE---SSIAQAQALFDTNVFGIL 109
Query: 148 YPTFVALPYL-HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
T LP++ + +GR++ +SV +LP P M+LYA++K A+ + ESL E+
Sbjct: 110 RMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEV 163
|
Length = 270 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 3e-15
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTI----DEY 92
E KV I+TGASS IGE IA +A A +V+ R E + G I D
Sbjct: 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVS 63
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWGNVYPTF 151
+ + V+ + +VD LVN A H +V D + F R+ +N T
Sbjct: 64 DEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDV-DEAEFDRIFAVNVKSPYLWTQ 122
Query: 152 VALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
A+P + G +VN AS P P + Y ++K A++T ++L EL
Sbjct: 123 AAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAEL 172
|
Length = 251 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 7e-15
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 35/201 (17%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL-------------QGSTI---- 89
++TGA+ IG+ A E AKR N++L++R + +L + TI
Sbjct: 1 GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60
Query: 90 ----DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTF--FFEEVTDTSIFPRLLDINF 143
D Y I + L + + LVN + H+ +F E + + ++++N
Sbjct: 61 SAGDDIYERIEK----ELEGLD---IGILVNNVGISHSIPEYFLETPEDEL-QDIINVNV 112
Query: 144 WGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
+ T + LP + + +VN +S +P P ++ Y+++KA L F +L E
Sbjct: 113 MATLKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKS 172
Query: 203 EVGITIATH--GWIGIEMTKG 221
+ GI + + + +M+K
Sbjct: 173 Q-GIDVQSLLPYLVATKMSKI 192
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 3e-14
Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 34/232 (14%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--GSTIDEY-------- 92
++++ K +ITGA IG +A AK N+ L+AR E L+ ++ Y
Sbjct: 3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIAT 62
Query: 93 ---NPINEVT-LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ EVT + E ++D L+N A + F E+ + + +++ +N G Y
Sbjct: 63 ADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELD-PAEWEKIIQVNLMGVYY 121
Query: 149 PTFVALPYLHESNGRVVVNASVENWLP-LPRMSLYASAKAALVTFYESLRFELNDE-VGI 206
T LP + E ++N S S Y+++K ++ ESL E+ + +
Sbjct: 122 ATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRV 181
Query: 207 TIATHGWIGIEMTKGKFMLEDGAE---MQWKEEREVHVAGGPVEDFARLIVS 255
T T + +M L DG MQ ED A IV+
Sbjct: 182 TALTPSTVATDMAVD-LGLTDGNPDKVMQ-------------PEDLAEFIVA 219
|
Length = 239 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 4e-14
Identities = 69/246 (28%), Positives = 106/246 (43%), Gaps = 52/246 (21%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESK 109
V ITGASS IG+ +A EYA++ A L LVARR + LQ + V++ + + +++
Sbjct: 5 VFITGASSGIGQALAREYARQGATLGLVARRTDALQ-AFAARLPKAARVSVYAADVRDAD 63
Query: 110 AV--------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155
A+ D ++ A + EE D ++F ++D N++G V TF P
Sbjct: 64 ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVA-TF--QP 120
Query: 156 YLH----ESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI---TI 208
++ G +V ASV LP Y+++KAA + + ESLR EL G+ TI
Sbjct: 121 FIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPA-GVRVVTI 179
Query: 209 ATHGWIGIEMTKGK-----FMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263
A G+I MT F++ + FA RG +
Sbjct: 180 AP-GYIRTPMTAHNPYPMPFLM-------------------DADRFAARAARAIARGRRF 219
Query: 264 VKFPSW 269
P W
Sbjct: 220 RVIP-W 224
|
Length = 257 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 5e-14
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 19/179 (10%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE------------NRLQGSTIDEY 92
++ KVV ITG +G A A R A + L+ R + L+ ID
Sbjct: 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLV 64
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPT 150
+P V N++ +D LVN A F + + D + R+ +N + +
Sbjct: 65 DPQAARRAVDEVNRQFGRLDALVNIAGA---FVWGTIADGDADTWDRMYGVNVKTTLNAS 121
Query: 151 FVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
ALP L S GR+V + P M YA+AKA + E+L EL D GIT+
Sbjct: 122 KAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDR-GITV 179
|
Length = 239 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 6e-14
Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 41/275 (14%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAK-------------RKANLVLVARRENRLQGSTIDE 91
M K+ I+TGASS G E AK ++ NL+ A + N Q + +
Sbjct: 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQ 60
Query: 92 YNPINEVTLVSLNNKESK--AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
+ ++ ++ + + +D LVN A + F EE+ + + + N +G +
Sbjct: 61 LDVTDQNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIP-VEEYRKQFETNVFGAISV 119
Query: 150 TFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
T LPY+ + ++N +S+ + P +S Y S+K AL F ESLR EL GI +
Sbjct: 120 TQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELK-PFGIDV 178
Query: 209 A--------THGWIGIEMTKGKFMLEDGAEMQWKE---------EREVHVAGGPVEDFAR 251
A T+ W E+ K + +KE G P D A
Sbjct: 179 ALIEPGSYNTNIW---EVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNP-IDVAN 234
Query: 252 LIVSGACRGDTYVKFPSWYDVFLLYRVFAPHVLNW 286
LIV A +++P V L+ + A +L W
Sbjct: 235 LIVEIAESKRPKLRYPIGKGVKLM--ILAKKILPW 267
|
Length = 280 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 1e-13
Identities = 64/252 (25%), Positives = 98/252 (38%), Gaps = 39/252 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ------GSTIDEYNPINE 97
++ KVV++TGA+ IG ++A R A L LV E L G + +
Sbjct: 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65
Query: 98 VT-LVSLNNKESKAVDHLVNT-------------ASLGHTFFFEEVTDTSIFPRLLDINF 143
VT L ++ A + V AS G + D F R++D+N
Sbjct: 66 VTDLAAM----QAAAEEAVERFGGIDVVVANAGIASGG-SV---AQVDPDAFRRVIDVNL 117
Query: 144 WGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-ND 202
G + LP L E G V+ +S+ + P M+ Y ++KA + F +LR E+ +
Sbjct: 118 LGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHH 177
Query: 203 EVGITIATHGWIGIEMTKGKFM-LEDGAEMQ----WKEEREVHVAGGPVEDFARLIVSGA 257
V + A WI ++ + L E++ W R VE A V G
Sbjct: 178 GVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTT-----SVEKCAAAFVDGI 232
Query: 258 CRGDTYVKFPSW 269
R V P W
Sbjct: 233 ERRARRVYAPRW 244
|
Length = 296 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 1e-13
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTLVSLN- 104
K V+ITGASS IGE A +AK A L+L RR RLQ + P +V + L+
Sbjct: 1 KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFP-VKVLPLQLDV 59
Query: 105 -NKES------------KAVDHLVNTA--SLGHTFFFEEVTDTSI--FPRLLDINFWGNV 147
++ES + +D LVN A +LG + + + + ++D N G +
Sbjct: 60 SDRESIEAALENLPEEFRDIDILVNNAGLALG----LDPAQEADLEDWETMIDTNVKGLL 115
Query: 148 YPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
T + LP + N ++N S+ P ++Y + KAA+ F +LR +L
Sbjct: 116 NVTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDL 169
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 1e-13
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLV-- 101
+++DK V++TGAS IG+ +A A A L+LV R +L+ P +V
Sbjct: 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61
Query: 102 ----SLNNK------ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
+ E ++ L+N A + H E+ +I RLL +N + T
Sbjct: 62 LTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAI-ERLLALNLTAPMQLTR 120
Query: 152 VALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
LP L +VVN S + P + Y ++K AL F E+LR EL D
Sbjct: 121 ALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADT 173
|
Length = 263 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 68.7 bits (169), Expect = 2e-13
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVL-VARRENRLQG--STIDEYN----PI 95
+ KV I+TGAS IG IA AK A +V+ E Q I E +
Sbjct: 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60
Query: 96 -------NEV-TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+V LV ++ +D LVN A + + ++TD R++D+N G +
Sbjct: 61 KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEW-DRVIDVNLTGVM 119
Query: 148 YPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
T ALPY+ + V+VN +S+ + LY+++K A+ F ++L EL GI
Sbjct: 120 LLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPS-GI 178
Query: 207 ---TIATHGWIGIEMTKG-----KFMLED 227
+A G I EM K L +
Sbjct: 179 RVNAVAP-GAIDTEMWSSFSEEDKEGLAE 206
|
Length = 247 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 2e-13
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
+ VV+ITGASS IG+ A +A+R A LVL AR E LQ + +E + EV +V
Sbjct: 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQ-AVAEECRALGAEVLVVP 62
Query: 103 LNNKESKAVDHL--------------VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ ++ V L VN +G FEE T +++ N G +
Sbjct: 63 TDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEE-TPIEAHEQVIQTNLIGYMR 121
Query: 149 PTFVALPYLHESNGRVVVNA-SVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
ALP + + +N S+ + P + Y+++K L F E+LR EL D I
Sbjct: 122 DAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIH 181
Query: 208 I 208
+
Sbjct: 182 V 182
|
Length = 330 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 3e-13
Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR---------RENRLQGSTIDE 91
K+V++TGA S IG + A +A+ A +V R G+
Sbjct: 309 PRGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHA 368
Query: 92 Y-----NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFW 144
Y + E D +VN A +G F DTS + R+LD+N W
Sbjct: 369 YRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGF---LDTSAEDWDRVLDVNLW 425
Query: 145 GNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
G ++ + + E G +V AS + P + YA++KAA++ E LR EL
Sbjct: 426 GVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL-A 484
Query: 203 EVGITIAT 210
GI +
Sbjct: 485 AAGIGVTA 492
|
Length = 582 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 1e-12
Identities = 45/178 (25%), Positives = 62/178 (34%), Gaps = 37/178 (20%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENR-LQGSTIDEYN-PINEVTLVSLN 104
V+ITG + +G +A A A +LVLV+RR + E EVT+ + +
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60
Query: 105 --------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+D +V+ A G V D L F + P
Sbjct: 61 VADRDALAALLAALPAALGPLDGVVHNA--G-------VLDDGPLEELTPERFERVLAPK 111
Query: 151 FVALPYLHE-----SNGRVVV---NASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
LHE G V+ A V L P + YA+A AAL E R E
Sbjct: 112 VTGAWNLHELTRDLDLGAFVLFSSVAGV---LGSPGQANYAAANAALDALAEHRRAEG 166
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 2e-12
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 12/171 (7%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST----------IDEYN 93
+ V+ITG +S IG +A ++ + +++ RRE RL + +D +
Sbjct: 2 KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHTIVLDVGD 61
Query: 94 PINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTS-IFPRLLDINFWGNVYPTFV 152
+ L E +D L+N A + + +D N G +
Sbjct: 62 AESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPIRLIKA 121
Query: 153 ALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
LP+L + +VN +S ++P+ +Y + KAAL ++ +LR +L D
Sbjct: 122 FLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKD 172
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 3e-12
Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK 106
V++TG +S IG IA +A+ A + + E L +T P +VT +
Sbjct: 11 GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALA-ATAAR-LPGAKVTATVADVA 68
Query: 107 ESKAVDHLVNTAS---------------LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
+ V+ + +TA G T +E+T + + L +N G Y
Sbjct: 69 DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQ-WEQTLAVNLNGQFYFAR 127
Query: 152 VALPYLHESN-GRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT-- 207
A+P L S G V++ +SV L P + YA++K A+V +SL EL GI
Sbjct: 128 AAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPL-GIRVN 186
Query: 208 ------IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLI 253
+ + + + + EM +E E G ED A
Sbjct: 187 AILPGIVRGPRMRRVIEARAQQLGIGLDEM-EQEYLEKISLGRMVEPEDIAATA 239
|
Length = 264 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 3e-12
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 17/190 (8%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+++DKVV++TG+ IG IA AK + +V+ A++ T+ + L
Sbjct: 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVL 62
Query: 104 NN---------------KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ D LVN A LG F V D + + + +F +Y
Sbjct: 63 ADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNV-DDKLIDKHISTDFKSVIY 121
Query: 149 PTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
+ + E G +V ASV P +S+Y + KAA++ + L EL ++ +
Sbjct: 122 CSQELAKEMREG-GAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPKIRVNA 180
Query: 209 ATHGWIGIEM 218
G++ ++
Sbjct: 181 IAPGFVKTKL 190
|
Length = 252 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 4e-12
Identities = 53/176 (30%), Positives = 70/176 (39%), Gaps = 27/176 (15%)
Query: 49 VVIITGASSDIGEQIAYEYAKR--KANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-- 104
V+I+TGAS IG +A E KR + +VL+AR E LQ + + VT V +
Sbjct: 1 VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLR-VTTVKADLS 59
Query: 105 ------------NKESKAVDHLVNTA-SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
K D L+N A SLG E D + D+N V T
Sbjct: 60 DAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEF-IDLDELQKYFDLNLTSPVCLTS 118
Query: 152 VALPYLHESNG-RVVVN----ASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
L + + VVN A+V P LY S+KAA F+ L E D
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGAAVN---PFKGWGLYCSSKAARDMFFRVLAAEEPD 171
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 64.5 bits (158), Expect = 5e-12
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 20/191 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+++ KVV++TGA+ IG + R A V A R+ ++ + P + +
Sbjct: 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP----ESVTDLGPRVVPLQLDV 58
Query: 104 NNKESKA--------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG--NVYPTFVA 153
+ S A V LVN A + T D ++ N++G + F
Sbjct: 59 TDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFA- 117
Query: 154 LPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT-IATH 211
P L + G +VN SV +W+ P + Y+++KAA + ++LR EL G + H
Sbjct: 118 -PVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELA-PQGTRVLGVH 175
Query: 212 -GWIGIEMTKG 221
G I +M G
Sbjct: 176 PGPIDTDMAAG 186
|
Length = 238 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 6e-12
Identities = 49/176 (27%), Positives = 68/176 (38%), Gaps = 18/176 (10%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVL-----------VARRENRLQGSTI----DEY 92
KV ++TGAS IG IA A+ A++V+ V G I D
Sbjct: 4 KVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQADVS 63
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+P L K VD LVN A + E ++ F R+ +N G +
Sbjct: 64 DPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEE-FDRMFTVNTKGAFFVLQE 122
Query: 153 ALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
A L GR++ +S P YA +KAA+ F L EL GIT+
Sbjct: 123 AAKRL-RDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGR-GITV 176
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 6e-12
Identities = 67/270 (24%), Positives = 104/270 (38%), Gaps = 45/270 (16%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
++ KVV ITG + IG A A A V + + L T E + L +
Sbjct: 2 DLRGKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPL-DV 59
Query: 104 NNKESKA------------VDHLVNTA---SLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ S A +D LVN A +G F + D R+LD+N +G +
Sbjct: 60 TDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGP---FLDEPDAVT-RRILDVNVYGVIL 115
Query: 149 PTFVALP-YLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGI 206
+ +A P + G VV AS+ +P+P M+ Y ++K A+V F ++ R EL V +
Sbjct: 116 GSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHV 175
Query: 207 TIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGG--PV--EDFARLIVSGACRGDT 262
++ ++ E+ G A G V ED A IV +
Sbjct: 176 SVVLPSFVNTELIAG-----------------TGGAKGFKNVEPEDVAAAIVGTVAKPRP 218
Query: 263 YVKFPSWYD-VFLLYRVFAPHVLNWTFRLL 291
V+ P + R+ V RLL
Sbjct: 219 EVRVPRALGPLAQAQRLLPRRVREALNRLL 248
|
Length = 273 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 7e-12
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID--------EYNPINEV 98
K ++TGA+S IG IA A AN+V+ E + + Y P + V
Sbjct: 1 GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPAD-V 59
Query: 99 T-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
T +++ E +D LVN A + H EE + R++ + +
Sbjct: 60 TKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEF-PPEDWDRIIAVMLTSAFHTIR 118
Query: 152 VALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
ALP++ + GR++ AS + P S Y +AK L+ + L E+ + GIT
Sbjct: 119 AALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEH-GIT 174
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 8e-12
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 34/198 (17%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVSLNN 105
+ ++ITGASS +G +A E+A + +L L ARR +RL+ + + P +V + +L+
Sbjct: 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDV 62
Query: 106 KESKAV--------DHL-------VNT-----ASLGHTFFFEEVTDTSIFPRLLDINFWG 145
+ V D L VN A LG T F T + NF
Sbjct: 63 NDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLG-TGKFWANKAT------AETNFVA 115
Query: 146 NVYPTFVALPYLHESN-GRVVVNASVENWLPLPR-MSLYASAKAALVTFYESLRFELNDE 203
+ A+ E G +V+ +SV LP + YA++KA + + E LR EL +
Sbjct: 116 ALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAEL-AK 174
Query: 204 VGITIAT--HGWIGIEMT 219
I ++T G+I EM
Sbjct: 175 TPIKVSTIEPGYIRSEMN 192
|
Length = 248 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 1e-11
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW 173
LVN A + EE+ + + +++N +G V T LP L + GRVV +S+
Sbjct: 82 LVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKAFLPLLRRAKGRVVNVSSMGGR 141
Query: 174 LPLPRMSLYASAKAALVTFYESLRFEL 200
+P P Y ++KAA+ F +SLR EL
Sbjct: 142 VPFPAGGAYCASKAAVEAFSDSLRREL 168
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 1e-11
Identities = 57/225 (25%), Positives = 84/225 (37%), Gaps = 20/225 (8%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS--TIDEYNPINEVTLVS 102
+DKVV+ITG S +G A AK A L LV E L+ + + E P EV L+
Sbjct: 1 FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60
Query: 103 LN---NKESKA-----------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ + +A +D N A + E F +++ IN G Y
Sbjct: 61 ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120
Query: 149 PTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGI 206
L + E G +V ASV + S YA+AK +V + E + I
Sbjct: 121 GLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRI 180
Query: 207 TIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFAR 251
G I M +G +E E V+ P++ F
Sbjct: 181 NAIAPGAILTPMVEGSLKQLGPEN--PEEAGEEFVSVNPMKRFGE 223
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 1e-11
Identities = 63/234 (26%), Positives = 96/234 (41%), Gaps = 30/234 (12%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK 106
KV ++T ASS IG IA A+ A + + AR L+ + + V V +
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60
Query: 107 ESKA--------------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+ + VD LVN A F E+TD + D+ +
Sbjct: 61 DPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTD-EDWLEAFDLKLLSVIRIVRA 119
Query: 153 ALPYLHE-SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT- 210
LP + E GR+V +S+ P P + L A+A L+ ++L EL + G+T+ +
Sbjct: 120 VLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPD-GVTVNSV 178
Query: 211 -HGWIGIEMTKGKFMLEDGAEMQ--WKEEREVHVAG-------GPVEDFARLIV 254
G+I E + +LE AE + EE E VA G E+ A LI
Sbjct: 179 LPGYIDTERVRR--LLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIA 230
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 1e-10
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVT------ 99
K V I G S +G +AY K A + + +R EN+L+ T+ +Y I+ V
Sbjct: 6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSST 65
Query: 100 -----LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVAL 154
++ K A+D LV T G+ + V + S +L + +Y +L
Sbjct: 66 ESARNVIEKAAKVLNAIDGLVVTVG-GYVE--DTVEEFSGLEEMLTNHIKIPLYAVNASL 122
Query: 155 PYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWI 214
+L E + V+V++ + P YA AKA L E L EL GI +
Sbjct: 123 RFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGR-GIRV-----N 176
Query: 215 GIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
GI + E WK+ R++ P EDFA++I+
Sbjct: 177 GI--APTTISGDFEPERNWKKLRKLGDDMAPPEDFAKVII 214
|
Length = 238 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 1e-10
Identities = 44/174 (25%), Positives = 60/174 (34%), Gaps = 27/174 (15%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI-NEVTLVS--LN 104
V ++TGA+ IG IA A +V+ R DE N + N LV L+
Sbjct: 1 AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60
Query: 105 NKESKA------------VDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPT 150
+ + A D LVN AS F+ + S + L IN P
Sbjct: 61 DFAACADLVAAAFRAFGRCDVLVNNAS---AFYPTPLGQGSEDAWAELFGINLKA---PY 114
Query: 151 FVAL---PYLHESNGRVVVNASVEN-WLPLPRMSLYASAKAALVTFYESLRFEL 200
+ L S ++N PL Y +KAAL S EL
Sbjct: 115 LLIQAFARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALEL 168
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 1e-10
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 27/176 (15%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLV--------ARRENRL------QGS 87
S ++ K +ITG S IG +A +A+ A++ + A +L +
Sbjct: 21 SGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCL 80
Query: 88 TI--DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG 145
I D + LV KE +D LVN A+ H E + D I L+ F
Sbjct: 81 LIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHP--QESIED--ITTEQLEKTFRT 136
Query: 146 NVYPTF----VALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESL 196
N++ F ALP+L + G ++N SV + P + YA+ K A+V F L
Sbjct: 137 NIFSMFYLTKAALPHLKK--GSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGL 190
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST----------------IDEYN 93
V+ITGA+S +G IA +A+ L L E + + + +Y+
Sbjct: 3 VMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYS 62
Query: 94 PINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
+ L ++ +D +VN A + FFEE++ + + IN G V
Sbjct: 63 QLT--ALAQACEEKWGGIDVIVNNAGVASGGFFEELS-LEDWDWQIAINLMGVVKGCKAF 119
Query: 154 LPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGITI 208
LP +GR+V AS+ + P MS Y AKA +V E+L EL +DE+G+ +
Sbjct: 120 LPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHV 176
|
Length = 270 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.3 bits (147), Expect = 2e-10
Identities = 52/196 (26%), Positives = 75/196 (38%), Gaps = 50/196 (25%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI-------------- 89
++ KV ++TGA+S IG +IA AK A +V+ + +
Sbjct: 1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60
Query: 90 ---DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
DE IN + + VD LVN A + H E+ T + +++ I G
Sbjct: 61 DVTDE-EAINA--GIDYAVETFGGVDILVNNAGIQHVAPIEDF-PTEKWKKMIAIMLDGA 116
Query: 147 VYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASA-KAALVTFYESLRFELNDEV 204
T ALP + G ++N ASV L SA KAA V+
Sbjct: 117 FLTTKAALPIMKAQGGGRIINMASVH--------GLVGSAGKAAYVS------------- 155
Query: 205 GITIATHGWIGIEMTK 220
A HG IG +TK
Sbjct: 156 ----AKHGLIG--LTK 165
|
Length = 258 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 2e-10
Identities = 45/209 (21%), Positives = 72/209 (34%), Gaps = 34/209 (16%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARREN--------RLQGSTIDEYNPINEV- 98
KV +TGAS IG IA AK A +V+ A+ + L G+ + I
Sbjct: 4 KVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAG 63
Query: 99 -----------------TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDI 141
LV + +D LVN A E+ T F + +
Sbjct: 64 GQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVED-TPAKRFDLMQRV 122
Query: 142 NFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
N G + ALP++ ++ G ++ + + P YA+ KA + L EL
Sbjct: 123 NLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAEL 182
Query: 201 -NDEVGIT-----IATHGWIGIEMTKGKF 223
+ + A E++ G
Sbjct: 183 RRHGIAVNSLWPSTAIETPAATELSGGSD 211
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 5e-10
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL---------QGSTI-----D 90
+E +V ++TGA+ IG IA A A +++V + G D
Sbjct: 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVD 63
Query: 91 EYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+ V+ ++ +D LV A + F E+ D + R++D+N G T
Sbjct: 64 VRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDE-QWERVIDVNLTGTFLLT 122
Query: 151 FVALPYLHESN-GRVVVNASVEN-WLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
ALP L + GR+V+ +SV + P ++ YA++KA LV F +L EL IT+
Sbjct: 123 QAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELA-ARNITV 181
Query: 209 -ATH-GWIGIEMTKGKFMLEDGAEM 231
+ H G + M + +
Sbjct: 182 NSVHPGGVDTPMAGNLGDAQWAEAI 206
|
Length = 251 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 5e-10
Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS---TIDEYNP----- 94
++DKV I+TG S IG+ + + +N++ +E +D N
Sbjct: 2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIK 61
Query: 95 -INEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
I+ V + +D LVN A + ++ + + R++++N G +
Sbjct: 62 GIDYVI------SKYGRIDILVNNAGI-ESYGAIHAVEEDEWDRIINVNVNGIFLMSKYT 114
Query: 154 LPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESL 196
+PY+ + + V++N ASV+++ + Y ++K A++ S+
Sbjct: 115 IPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSI 158
|
Length = 258 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 7e-10
Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 30/183 (16%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL-- 100
++++KV +ITG + +G +A A+ A + + R + + E + +
Sbjct: 1 FSLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGD-KVAKEITALGGRAIAL 59
Query: 101 -------VSLN------NKESKAVDHLVNTASLGH------TFFFEEVTDTSIF------ 135
SL + VD L+N A H +E T+ + F
Sbjct: 60 AADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEG 119
Query: 136 -PRLLDINFWGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFY 193
+ D+N G+ P+ V + E G ++N +S+ + PL ++ Y++AKAA+ F
Sbjct: 120 WEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179
Query: 194 ESL 196
+ L
Sbjct: 180 QWL 182
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 7e-10
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 34/172 (19%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEV------- 98
KVV+ITGASS IG A + A+ A + LVAR L + E I
Sbjct: 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALD-ELVAE---IRAKGGTAHAY 425
Query: 99 -----------TLVSLNNKESKAVDHLVNTA------SLGHTFFFEEVTDTSIFPRLLDI 141
V E VD+LVN A S+ ++ + D + R + +
Sbjct: 426 TCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENS--TDRFHD---YERTMAV 480
Query: 142 NFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-LPRMSLYASAKAALVTF 192
N++G V LP++ E VVN S PR S Y ++KAAL F
Sbjct: 481 NYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAF 532
|
Length = 657 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 8e-10
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 34/195 (17%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTL 100
+++ KV +ITG +G +A E A+ A + ++ R + + + + I E
Sbjct: 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAG--GEALA 63
Query: 101 VSLN--NKES--KA----------VDHLVNTASLGH---TFFFEEV----TDTSIF---- 135
V + +KES +A D L+N A H T E + F
Sbjct: 64 VKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDE 123
Query: 136 ---PRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-PLPRMSLYASAKAALVT 191
+ D+N G + PT V + G ++N S N PL ++ Y++AKAA+
Sbjct: 124 EGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISN 183
Query: 192 FYESLRFELNDEVGI 206
F + L +VGI
Sbjct: 184 FTQWLAVHFA-KVGI 197
|
Length = 278 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 1e-09
Identities = 47/220 (21%), Positives = 75/220 (34%), Gaps = 39/220 (17%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESK 109
V++TG S IG IA A R + VLV R
Sbjct: 1 VLVTGGSGGIGGAIARWLASRGSPKVLVVSRR---------------------------- 32
Query: 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-SNGRVVVNA 168
D +V+ A++ ++T + I R + N G A + GR ++ +
Sbjct: 33 --DVVVHNAAILDDGRLIDLTGSRI-ERAIRANVVGTRRLLEAARELMKAKRLGRFILIS 89
Query: 169 SVENWLPLPRMSLYASAKAALVTFYESLRFE-LNDEVGITIATHGWIGIEMTKGKFMLED 227
SV P + YA++KAAL + E + + T G G M +
Sbjct: 90 SVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTW-----AGSGMAKG 144
Query: 228 GAEMQWKEEREVH-VAGGPVEDFARLIVSGACRGDTYVKF 266
+ H V P E+ AR +++ R V +
Sbjct: 145 PVAPEEILGNRRHGVRTMPPEEVARALLNALDRPKAGVCY 184
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 2e-09
Identities = 52/201 (25%), Positives = 80/201 (39%), Gaps = 19/201 (9%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE--------NRLQGS----TIDEY 92
+E KV I+TGA + IG A A+ A V+VA + ++ G +D
Sbjct: 1 LEGKVAIVTGAGAGIGAACAARLAREGAR-VVVADIDGGAAQAVVAQIAGGALALRVDVT 59
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+ L +E +D LVN A H TD +++ + + IN G
Sbjct: 60 DEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRH 119
Query: 153 ALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI---TI 208
A P + G +VN +S+ P Y ++KAA+ +L EL GI +
Sbjct: 120 AAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHA-GIRCNAL 178
Query: 209 ATHGWIGIEMTKGKFMLEDGA 229
A G I + K +GA
Sbjct: 179 AP-GLIDTPLLLAKLAGFEGA 198
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 2e-09
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS--------------TID 90
++ KVV+++G +G +A A+ A++VL AR RL D
Sbjct: 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62
Query: 91 EYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+ LV+L + VD LVN A + D + + ++++N G + T
Sbjct: 63 ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122
Query: 151 FVALPYLHESNGRVV-VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIA 209
P L ES G +V +N+ V P+ Y AK AL+ +SL EL + GI +
Sbjct: 123 QAFTPALAESGGSIVMINSMVLR-HSQPKYGAYKMAKGALLAASQSLATELGPQ-GIRVN 180
Query: 210 T--HGWIGIEMTKGKF 223
+ G+I + KG F
Sbjct: 181 SVAPGYIWGDPLKGYF 196
|
Length = 258 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 2e-09
Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSL 103
+ K +ITGA IGE IA +A+ ANL+L+ + DE + T V
Sbjct: 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEK--LADELCGRGHRCTAVVA 61
Query: 104 NNKESKAV--------------DHLVNTASLGHTFFFEEVTDTSI-FPRLLDINFWGNVY 148
+ ++ +V D LVN A + F +++D F +DIN G
Sbjct: 62 DVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFH--IDINIKGVWN 119
Query: 149 PTFVALPYLHESN-GRVVVNASVE-NWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
T LP + GR+V+ +SV + + P + YA KAA+V +SL E GI
Sbjct: 120 VTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQS-GI 178
Query: 207 TI 208
+
Sbjct: 179 RV 180
|
Length = 263 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 51/232 (21%), Positives = 90/232 (38%), Gaps = 37/232 (15%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTL---VS 102
KV IITGA+ IG IA A N+VL STI E + N V + V+
Sbjct: 3 KVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVT 62
Query: 103 LNNKESKAVDH----------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+ +D +VN A + +T+ ++ +N +G ++
Sbjct: 63 DKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITE-EDLKKVYAVNVFGVLFGIQA 121
Query: 153 ALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT 210
A + G+++ +S+ P + Y+++K A+ ++ EL + GIT+
Sbjct: 122 AARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPK-GITVNA 180
Query: 211 H--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVED----FARLIVSG 256
+ G + EM + +E +AG P + F+ I G
Sbjct: 181 YAPGIVKTEM------------WDYIDEEVGEIAGKPEGEGFAEFSSSIPLG 220
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 2e-09
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ----------GS--- 87
S N+E KV ++TGASS +G + A A+ A +VL +RR RL+ G+
Sbjct: 3 RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV 62
Query: 88 -TIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
++D + + V+ E+ +D LVN + + T +VT P D F N
Sbjct: 63 VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVT-----PADFDFVFDTN 117
Query: 147 VYPTF-----VALPYLHESNG--------RVVVNASVENWLPLPRMSLYASAKAALVTFY 193
F VA + + G R++ ASV LP++ LY +KAA+V
Sbjct: 118 TRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMT 177
Query: 194 ESLRFELNDEVGITIAT--HGWIGIEMTKGKFMLEDGAEMQ 232
++ E GI + G+I E+ + E G ++
Sbjct: 178 RAMALEWG-RHGINVNAICPGYIDTEINHHHWETEQGQKLV 217
|
Length = 258 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 57.1 bits (139), Expect = 2e-09
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 55/243 (22%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTLV 101
+++ K ++TGAS IG IA A A +V+ E + + + V +
Sbjct: 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61
Query: 102 SLNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRL--------LDI 141
++++ + A+D LVN A G +T ++ PR+ +D+
Sbjct: 62 DVSDEAAVRALIEAAVEAFGALDILVNNA--G-------ITRDALLPRMSEEDWDRVIDV 112
Query: 142 NFWGNVYPTFV----ALPYLHES-NGRVVVNASVENWL-PLPRMSLYASAKAALVTFYES 195
N G TF ALP + ++ GR+V +SV + + P + Y++AKA ++ F ++
Sbjct: 113 NLTG----TFNVVRAALPPMIKARYGRIVNISSV-SGVTGNPGQTNYSAAKAGVIGFTKA 167
Query: 196 LRFELNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKE-EREVHVAG-GPVEDFA 250
L EL GIT +A G+I +MT+G E E +E+ + G E+ A
Sbjct: 168 LALELA-SRGITVNAVAP-GFIDTDMTEG------LPEEVKAEILKEIPLGRLGQPEEVA 219
Query: 251 RLI 253
+
Sbjct: 220 NAV 222
|
Length = 246 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 2e-09
Identities = 47/181 (25%), Positives = 67/181 (37%), Gaps = 25/181 (13%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-----------NRLQ-GSTI-- 89
KV +ITG + IG IA + + R N L+ GS
Sbjct: 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAAL 62
Query: 90 --DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEV--TDTSIFPRLLDINFWG 145
D +P LV+ +D LVN AS +F+ + + + L N
Sbjct: 63 QADLLDPDALPELVAACVAAFGRLDALVNNAS---SFYPTPLGSITEAQWDDLFASNLKA 119
Query: 146 NVYPTFVALPYLHESNGRVV--VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
+ + A P L + G +V + E PL +Y +AKAAL SL EL E
Sbjct: 120 PFFLSQAAAPQLRKQRGAIVNITDIHAER--PLKGYPVYCAAKAALEMLTRSLALELAPE 177
Query: 204 V 204
V
Sbjct: 178 V 178
|
Length = 249 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 3e-09
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 23/208 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-GSTIDEYNPINEVT------- 99
KV ++TGAS IG IA A+ AN+V+ +R E + + + E +
Sbjct: 6 KVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDVSD 65
Query: 100 ------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
V ++ +D LVN A + EE + + ++D+N G + +
Sbjct: 66 EEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAE-WRDVIDVNLNGVFFVSQAV 124
Query: 154 LPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---IA 209
++ + +G+++ S+ + L P + YA++K + ++L E GI IA
Sbjct: 125 ARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARH-GIQVNAIA 183
Query: 210 THGWIGIEMTKGKFMLEDGAEMQWKEER 237
G+ EMT+ D +R
Sbjct: 184 P-GYFATEMTEAVV--ADPEFNDDILKR 208
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 57.9 bits (141), Expect = 4e-09
Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 18/158 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE 107
KV ++TGA+ IG+ A A A +VL E + + E + V+ + +
Sbjct: 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAE-AAAAELGGPDRALGVACDVTD 481
Query: 108 SKAV--------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN--VYPTF 151
AV D +V+ A + + EE +D + R D+N G+ V
Sbjct: 482 EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSD-EDWRRSFDVNATGHFLVAREA 540
Query: 152 VALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189
V + G +V AS P P Y +AKAA
Sbjct: 541 VRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAE 578
|
Length = 681 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 4e-09
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-------LQGSTIDEYNP 94
+ + +KV ++T ++ IG IA A+ A++V+ +R++ LQG +
Sbjct: 5 RDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGT 64
Query: 95 INEV-------TLVSLNNKESKAVDHLVNTASLGHTFFF------EEVTDTSIFPRLLDI 141
+ V LV+ VD LV+ A++ FF EEV D ++LD+
Sbjct: 65 VCHVGKAEDRERLVATAVNLHGGVDILVSNAAVN-PFFGNILDSTEEVWD-----KILDV 118
Query: 142 NFWGNVYPTFVALPYLHE-SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
N T +P + + G VV+ +SV + P P + Y +K AL+ ++L EL
Sbjct: 119 NVKATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPEL 178
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 5e-09
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKES 108
V+ITGA+S IG+Q+A +YAK+ ++ R ++ L + I + ++ +
Sbjct: 3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLD-ELHTQSANIFTLAFDVTDHPGT 61
Query: 109 KAVDHLVNTASLGHTFFF---------EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE 159
KA L + + F + D ++ R+ ++N G P+L
Sbjct: 62 KAA--LSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHL-S 118
Query: 160 SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT 210
RVV+ S+ + L LPR Y ++KAA+ F +L+ +L + GI + T
Sbjct: 119 CGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPK-GIEVVT 168
|
Length = 240 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 6e-09
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVL---------VARRENRLQGSTIDE-YNPIN- 96
KV ++TG++S IG IA A AN+VL A R + Y+ +
Sbjct: 3 KVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADL 62
Query: 97 ----EVT-LVSLNNKESKAVDHLVNTASLGHTFFFEEV-TDTSIFPRLLDINFWGNVYPT 150
+ +V+ ++ VD LVN A + H E+ T+ + ++ +N + T
Sbjct: 63 SKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEK--WDAIIALNLSAVFHTT 120
Query: 151 FVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
+ALP++ + GR++ ASV + S Y +AK +V + + E G+T
Sbjct: 121 RLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALE-TAGTGVT 177
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (134), Expect = 6e-09
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--------------GSTI 89
N+ K ++TGA+S IG++IA E A+ A + + ++ G +
Sbjct: 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM 63
Query: 90 DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
D N + + +VD LV+ A + E + + ++ I+ G
Sbjct: 64 DVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENY-SFADWKKMQAIHVDGAFLT 122
Query: 150 TFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALV 190
T AL ++++ + G V+ SV + P S Y +AK L+
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLL 165
|
Length = 262 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 6e-09
Identities = 55/220 (25%), Positives = 87/220 (39%), Gaps = 26/220 (11%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVL-----------VARRENRLQGSTIDEYNPI 95
KV I+TG + +G A A +VL A + + +D +
Sbjct: 5 GKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHLDVTDED 64
Query: 96 NEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDIN----FWGNVYPTF 151
+V + +D LVN A + E T + RLLDIN F G T
Sbjct: 65 GWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEE-WRRLLDINLTGVFLG----TR 119
Query: 152 VALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGITIA 209
+P + E+ G ++N +S+E + P ++ Y ++K A+ +S E GI +
Sbjct: 120 AVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRVN 179
Query: 210 T-H-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVE 247
+ H G+I MT +L EM + AG P E
Sbjct: 180 SVHPGYIYTPMTDE--LLIAQGEMGNYPNTPMGRAGEPDE 217
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 9e-09
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--------------- 92
KV ++TGASS IG+ IA A AN+V+ R + ++E
Sbjct: 4 KVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVS 63
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+ V L KE +D LVN A L E+T + +++D+N G
Sbjct: 64 KEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMT-LEDWNKVIDVNLTGQFLCARE 122
Query: 153 ALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
A+ +S G+++ +SV +P P YA++K + ++L E +
Sbjct: 123 AIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPK 175
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 1e-08
Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 21/178 (11%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL-------QGSTIDEYNPI 95
E +V ++TGAS IG +A + +V ARR +++ Q + P
Sbjct: 2 ERWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPY 61
Query: 96 -----NEVTLVSLNN---KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
NE ++S+ + + + VD +N A L T + + D+N
Sbjct: 62 QCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGK-TEGWKEMFDVNVLALS 120
Query: 148 YPTFVALPYLHESN---GRVVVNASV--ENWLPLPRMSLYASAKAALVTFYESLRFEL 200
T A + E N G ++ S+ P+ YA+ K A+ E LR EL
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQEL 178
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 1e-08
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 19/220 (8%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLV-------ARRENRLQGSTIDEYNPINEVTL 100
KV I+TG IG+QI ++ + +V A + + + + TL
Sbjct: 2 KVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADETL 61
Query: 101 VSLNNKES----KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156
V +D LVN A+ G + + R+L +N G +
Sbjct: 62 VKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEE-WDRILSVNLTGPYELSRYCRDE 120
Query: 157 LHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGI 216
L ++ GR++ AS + P YA++K LV +L L ++ + + GW I
Sbjct: 121 LIKNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPDIRVNCISPGW--I 178
Query: 217 EMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
T+ + E A +E+ H AG G +D A L++
Sbjct: 179 NTTEQQ---EFTAAPLTQEDHAQHPAGRVGTPKDIANLVL 215
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 2e-08
Identities = 55/229 (24%), Positives = 82/229 (35%), Gaps = 30/229 (13%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----------GSTID-- 90
K +ITG SS G +A +V R E +D
Sbjct: 1 MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVT 60
Query: 91 EYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+++ I+ V V+ +D LVN A GH EE + R ++N +G V T
Sbjct: 61 DFDAIDAV--VADAEATFGPIDVLVNNAGYGHEGAIEESPLAEM-RRQFEVNVFGAVAMT 117
Query: 151 FVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI--T 207
LP + G +V S+ + +P + Y +K AL ESL E+ GI T
Sbjct: 118 KAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAP-FGIHVT 176
Query: 208 IATHG-----WIGIEMTKGKFMLEDGAEM-----QWKEEREVHVAGGPV 246
G W G M + + D + Q +E + G P
Sbjct: 177 AVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPA 225
|
Length = 277 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 54.4 bits (132), Expect = 2e-08
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 28/199 (14%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
++E KV ++TGAS IG IA A + AN+V+ + + E + + V
Sbjct: 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61
Query: 103 LN--NKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ + ES VD LVN A + + + + R++D N+
Sbjct: 62 GDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKE-EDWDRVIDT----NLT 116
Query: 149 PTFV----ALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
F + + GR++ +SV + P + YA++KA ++ F +SL EL
Sbjct: 117 GVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASR 176
Query: 204 VGITIAT--HGWIGIEMTK 220
GIT+ G+I +MT
Sbjct: 177 -GITVNAVAPGFIETDMTD 194
|
Length = 248 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 3e-08
Identities = 43/213 (20%), Positives = 74/213 (34%), Gaps = 38/213 (17%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKES- 108
+I+ GA+ IG +A + ++ G + +Y V + ++ S
Sbjct: 1 IIVIGATGTIGLAVAQLLSAHGHEVITA--------GRSSGDY-------QVDITDEASI 45
Query: 109 KA-------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN 161
KA D +V+TA E+TD L G + LPYL++
Sbjct: 46 KALFEKVGHFDAIVSTAGDAEFAPLAELTDADFQRGLNS-KLLGQINLVRHGLPYLND-G 103
Query: 162 GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKG 221
G + + + + P+P + A+ AL F + EL + I + G
Sbjct: 104 GSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRGIRINAVSPGV-------- 155
Query: 222 KFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+E+ E P ED A+ V
Sbjct: 156 ---VEESLEAYGDFFPG--FEPVPAEDVAKAYV 183
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 18/176 (10%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVS 102
+E +V ++TG SS IG + A++ + R E RL + + E P +
Sbjct: 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65
Query: 103 LNNKESKAV--------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ + V D LVN A G F + TD + + L++ ++ +
Sbjct: 66 CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDA-WRDELELKYFSVIN 124
Query: 149 PTFVALPYLHESNGRVVVNA-SVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
PT LP L S +V S+ P P M ++A+A L+ +SL EL +
Sbjct: 125 PTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPK 180
|
Length = 265 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 32/181 (17%)
Query: 40 FY--SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-------------- 83
Y S ++ KV +ITG S IG +A +AK A++ +V E+
Sbjct: 37 NYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGV 96
Query: 84 ----LQGSTIDEY--NPINEVTLVSLNNKESKAVDHLVNTASLG-HTFFFEEVTDTSIFP 136
+ G DE E T+ +E +D LVN A+ E++T
Sbjct: 97 KCLLIPGDVSDEAFCKDAVEETV-----RELGRLDILVNNAAFQYPQQSLEDITAEQ-LD 150
Query: 137 RLLDINFWGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYES 195
+ N + + T ALP+L G ++N S+ + + Y++ K A+ F S
Sbjct: 151 KTFKTNIYSYFHMTKAALPHL--KQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRS 208
Query: 196 L 196
L
Sbjct: 209 L 209
|
Length = 290 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 6e-08
Identities = 58/217 (26%), Positives = 87/217 (40%), Gaps = 58/217 (26%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK 106
KVV+ITGA+S IG++ A E AKR A++++ R E + + + E+ + N K
Sbjct: 1 GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEA-------AAEIKKETGNAK 53
Query: 107 -ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDI------------------------ 141
E +D L + AS+ F EE FPR LDI
Sbjct: 54 VEVIQLD-LSSLASVRQ--FAEEFLA--RFPR-LDILINNAGIMAPPRRLTKDGFELQFA 107
Query: 142 -NFWGNVYPTFVALPYL-HESNGRVVVNASV--------------ENWLPLPRMSLYASA 185
N+ G+ T + LP L + R+V +S+ EN Y +
Sbjct: 108 VNYLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQS 167
Query: 186 KAALVTFYESLRFELNDEVGITI-ATHGWIGIEMTKG 221
K A + F L L G+T+ A H G+ T+
Sbjct: 168 KLANILFTRELARRLEGT-GVTVNALH--PGVVRTEL 201
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 6e-08
Identities = 54/221 (24%), Positives = 84/221 (38%), Gaps = 29/221 (13%)
Query: 48 KVVIITGASSDIGEQIAYEYAKR----------KANL--VLVARRENRLQGSTIDEYNPI 95
K + ITGA+S IG + A +A+ + L + + +D +
Sbjct: 1 KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRA 60
Query: 96 N-EVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVAL 154
L +D L N A +G FE+V + R++DIN G + + AL
Sbjct: 61 AWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAH-DRMVDINVKGVLNGAYAAL 119
Query: 155 PYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE---------- 203
PYL + G V+N AS P +++Y++ K A+ E+L E
Sbjct: 120 PYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPW 179
Query: 204 -VGITIATHGWIGIEMTKG---KFMLEDGAEMQWKEEREVH 240
V I T G G KG + D A++ W V
Sbjct: 180 FVDTPILTKGETGAAPKKGLGRVLPVSDVAKVVWAAAHGVP 220
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 6e-08
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 21/184 (11%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL-- 100
+++ KV +ITG S IG IA + + AR + L+ E N V
Sbjct: 2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELE-EAAAELNNKGNVLGLA 60
Query: 101 --VSLNNKESKAVDH----------LVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGN 146
V +AVD L+ A +GH F V + + + ++D N G
Sbjct: 61 ADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGH---FAPVEELTPEEWRLVIDTNLTGA 117
Query: 147 VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
Y A+P L G ++ +S+ + Y ++K LV F E+ +L GI
Sbjct: 118 FYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQY-GI 176
Query: 207 TIAT 210
++T
Sbjct: 177 KVST 180
|
Length = 237 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 7e-08
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 37/183 (20%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--------------------- 85
K +++TGASS IGE A ++A+R A +V VARRE+ L
Sbjct: 40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLS 99
Query: 86 -GSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTF---FFEEVTDTSIFPRLLDI 141
+D LV+ K VD L+N A G + E + R + +
Sbjct: 100 DLDAVDA--------LVADVEKRIGGVDILINNA--GRSIRRPLAESLDRWHDVERTMVL 149
Query: 142 NFWGNVYPTFVALPYLHESNGRVVVNASVENWLP--LPRMSLYASAKAALVTFYESLRFE 199
N++ + P + E ++N + L P S+Y ++KAAL + E
Sbjct: 150 NYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETE 209
Query: 200 LND 202
D
Sbjct: 210 WGD 212
|
Length = 293 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 8e-08
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85
+ KV IITGASS IG A +A+ A +V+ ARR+ L
Sbjct: 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELD 44
|
Length = 254 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 9e-08
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL-VS 102
+ K ++TGA IG AK A +V V+R + L S + E I V + +S
Sbjct: 4 DFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLD-SLVRECPGIEPVCVDLS 62
Query: 103 LNNKESKA------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156
+ +A VD LVN A++ F EVT + F R D+N ++ + +
Sbjct: 63 DWDATEEALGSVGPVDLLVNNAAVAILQPFLEVTKEA-FDRSFDVNVRAVIHVSQIVARG 121
Query: 157 LHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+ G +V +S + L ++Y S KAAL + + EL
Sbjct: 122 MIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALEL 167
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 1e-07
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 30/173 (17%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESK 109
V++TGA+ IG +A A+ A + V R +L D L+ +S
Sbjct: 1 VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60
Query: 110 AV--------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG------NVYP 149
AV D LVN A + + ++D +N +G V P
Sbjct: 61 AVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDW-QATFAVNTFGVFNVSQAVSP 119
Query: 150 TFVALPYLHESNGRVVVNASVENWLPLPRMSL--YASAKAALVTFYESLRFEL 200
+G +V S N +PRM + YA++KAAL + L EL
Sbjct: 120 RMKR-----RRSGAIVTVGS--NAANVPRMGMAAYAASKAALTMLTKCLGLEL 165
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 1e-07
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVL--VARRE------NRLQGSTIDEYNPIN 96
+ KV I+TG + IG+ I A+ A +V+ + +E N L D Y
Sbjct: 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQA 63
Query: 97 EVTLVSLNNK---ESKA----VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
+V+ V N+ E+ VD LVN A + F+++ + R++D+N
Sbjct: 64 DVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNRED-WERVIDVNLSSVFNT 122
Query: 150 TFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGIT 207
T LPY+ E+ GR++ +S+ + Y++AKA ++ F +SL EL V +
Sbjct: 123 TSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVN 182
Query: 208 IATHGWIGIEM 218
G+I EM
Sbjct: 183 AICPGFIDTEM 193
|
Length = 247 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 1e-07
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 23/194 (11%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL--NNKE 107
V+ITGAS IG ++ + R N V+ R+ + + ++ L ++
Sbjct: 1 VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60
Query: 108 SKAV------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155
+++ D L+N A + H++ D+ + +N G + T LP
Sbjct: 61 AESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFLP 120
Query: 156 YLHESNGRVVVN-----ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT-IA 209
L + ++N S+ + S Y ++KAAL +SL EL + GIT ++
Sbjct: 121 LLLKGARAKIINISSRVGSIGDNTSGGWYS-YRASKAALNMLTKSLAVELKRD-GITVVS 178
Query: 210 TH-GWIGIEMTKGK 222
H GW+ +M
Sbjct: 179 LHPGWVRTDMGGPF 192
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLV------ARRENRLQGST-----IDEYN 93
+E KV I+TGA S GE IA +A+ A +V+ A R G D
Sbjct: 3 LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVTK 62
Query: 94 PINEVTLVSLNNKESKAVDHLVNTASLGHTFF-FEEVTDTSIFPRLLDINFWGNVYPTFV 152
+ +V + +D LVN A + H EV + F R+ +N
Sbjct: 63 RADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEE-FDRVFAVNVKSIYLSAQA 121
Query: 153 ALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+P++ E G V++N AS P P ++ Y ++K +VT +++ EL
Sbjct: 122 LVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVEL 170
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 2e-07
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 29/195 (14%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--N 105
KV ++TGAS IG IA A A + + R E + + + + +
Sbjct: 1 KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60
Query: 106 KES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
+E+ VD LVN A + +++ + ++++N G T
Sbjct: 61 REAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEED-WDAVINVNLTGVFNVTQAV 119
Query: 154 LPYLHES-NGRVV----VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT- 207
+ + + +GR++ V + N P + YA++KA ++ F +SL EL GIT
Sbjct: 120 IRAMIKRRSGRIINISSVVGLIGN----PGQANYAASKAGVIGFTKSLAKELASR-GITV 174
Query: 208 --IATHGWIGIEMTK 220
+A G+I +MT
Sbjct: 175 NAVAP-GFIDTDMTD 188
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 2e-07
Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 22/174 (12%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------------GSTI 89
++ KV ITG + IG+ IA +A+ A++ + R+ L+
Sbjct: 1 LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60
Query: 90 DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFF--FEEVTDTSIFPRLLDINFWGNV 147
D +P V KE +D L+N A F E ++ F ++DI+ G
Sbjct: 61 DVRDPEAVEAAVDETLKEFGKIDILINNA--AGNFLAPAESLSPNG-FKTVIDIDLNGTF 117
Query: 148 YPTFVALPYLHES-NGRVVVNASVEN-WLPLPRMSLYASAKAALVTFYESLRFE 199
T L E+ +G ++N S + P A+AKA + SL E
Sbjct: 118 NTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVE 171
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 2e-07
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR------------------LQ 85
++E KVV+ITG S+ +G +A + K KA +V+ R + ++
Sbjct: 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63
Query: 86 GSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG 145
G E + +N L+ KE +D ++N A + + E++ + ++++ N G
Sbjct: 64 GDVTVESDVVN---LIQTAVKEFGTLDVMINNAGIENAVPSHEMS-LEDWNKVINTNLTG 119
Query: 146 NVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
+ A+ Y E + G ++ +SV +P P YA++K + E+L E
Sbjct: 120 AFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAME 175
|
Length = 261 |
| >gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 5e-07
Identities = 46/184 (25%), Positives = 70/184 (38%), Gaps = 29/184 (15%)
Query: 49 VVIITGASSDIGEQIAYEYAKRKAN----LVLVARRENRLQGS--TIDEYNPINEVTLVS 102
V ++TGAS G IA E AK + LVL AR + L+ I V VS
Sbjct: 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61
Query: 103 LNNKESKAVDHLV-------------------NTASLGHTF-FFEEVTDTSIFPRLLDIN 142
L+ ++ L+ N +LG F +++D++ +N
Sbjct: 62 LDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALN 121
Query: 143 FWGNVYPTFVALPYLHESNG--RVVVNASVENWL-PLPRMSLYASAKAALVTFYESLRFE 199
+ T L +S G R VVN S + P +LY + KAA ++ L E
Sbjct: 122 LTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALE 181
Query: 200 LNDE 203
+
Sbjct: 182 EKNP 185
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 6e-07
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 33/227 (14%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL-VSL 103
M +KV ITGAS G +R +V AR L + + E + L + +
Sbjct: 1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATL--ADLAEKYGDRLLPLALDV 58
Query: 104 NNKE------SKAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
++ AV+H +VN A G EEVT++ +D NF+G ++ T
Sbjct: 59 TDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEA-RAQIDTNFFGALWVTQ 117
Query: 152 VALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI--TI 208
LPYL E +G ++ +S+ P +Y ++K AL E+L E+ E GI T+
Sbjct: 118 AVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEV-AEFGIKVTL 176
Query: 209 ATHG-----WIGIEMTKGKFM-----LEDGAEMQWKEEREVHVAGGP 245
G W G + + L + QW E V G P
Sbjct: 177 VEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSER---SVDGDP 220
|
Length = 275 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 6e-07
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 22/179 (12%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARR----------ENRLQGST-------IDEY 92
++TG S IG+ IA A+R A++V+ R+ E G + +
Sbjct: 1 ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+ E + + + +D LV+ A+ G E+T + ++ N V+
Sbjct: 61 QDVEE--MFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAH-WDAKMNTNLKALVHCAQQ 117
Query: 153 ALPYL-HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT 210
A + GR+V +S+ + LP +AKAAL L EL GI +
Sbjct: 118 AAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPR-GIRVNA 175
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 6e-07
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 29/178 (16%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL---------QG-------- 86
N+E K ++TG + IG I E A A + AR + L +G
Sbjct: 3 NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVC 62
Query: 87 --STIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDIN 142
S+ E + + K ++ LVN A T +E D + + ++ N
Sbjct: 63 DVSSRSERQELMDTVASHFGGK----LNILVNNAG---TNIRKEAKDYTEEDYSLIMSTN 115
Query: 143 FWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
F + + +A P L S NG +V +SV + +P + Y + K AL SL E
Sbjct: 116 FEAAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACE 173
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 7e-07
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 38 NNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ----------GS 87
N F ++ K+ ++TGAS IGE IA A++ A++++ +R+ + Q G
Sbjct: 2 NLF---DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK 58
Query: 88 T------IDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDI 141
I E I + + + + +D LVN A+ F TD F + +D+
Sbjct: 59 AEALACHIGEMEQI-DALFAHIRERHGR-LDILVNNAAANPYFGHILDTDLGAFQKTVDV 116
Query: 142 NFWGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALV 190
N G + + A + E G +VN ASV P +Y+ KAA++
Sbjct: 117 NIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVI 166
|
Length = 252 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 7e-07
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 32/228 (14%)
Query: 52 ITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAV 111
ITGASS G + R + RR + L + + + ++ L+ +S AV
Sbjct: 7 ITGASSGFGRGMTERLLARGDRVAATVRRPDALD--DLKARYG-DRLWVLQLDVTDSAAV 63
Query: 112 --------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL 157
D +V+ A G EE++D I R +D N G++ ALP+L
Sbjct: 64 RAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQI-RRQIDTNLIGSIQVIRAALPHL 122
Query: 158 HESNG-RVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND-EVGITIATHGWIG 215
G R+V +S + P SLY + K + F E++ E+ + TI G
Sbjct: 123 RRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPAR 182
Query: 216 IEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSG--ACRGD 261
G L+ GA + + + PV D R + G A GD
Sbjct: 183 TNFGAG---LDRGAPL------DAY-DDTPVGDLRRALADGSFAIPGD 220
|
Length = 276 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 9e-07
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 30/181 (16%)
Query: 51 IITGASSDIGEQIAYEYAKRKANLVL-------VARRENRLQGSTIDEYNPINEVTLVSL 103
+ITG +S IG E+A+R A +VL + + N L+ D + + +V
Sbjct: 10 VITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDV----- 64
Query: 104 NNKESKAVDHLVNTAS--LGHT-FFFEEVTDTSIFP----------RLLDINFWGNVYPT 150
+ + V HL + A LGH F P ++D++ WG+++
Sbjct: 65 --RHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTV 122
Query: 151 FVALPYL--HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGIT 207
LP L + G VV AS +P + Y AK +V E+L E+ + +G++
Sbjct: 123 EAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVS 182
Query: 208 I 208
+
Sbjct: 183 V 183
|
Length = 275 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 9e-07
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 16/172 (9%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS-----TIDEYNPINEV 98
N++ K++I+TG SS IG I E AN+V Q D + EV
Sbjct: 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSA-EEV 64
Query: 99 T-LVSLNNKESKAVDHLVNTASLGH----TFFFEE----VTDTSIFPRLLDINFWGNVYP 149
V+ ++ +D LVN A + + + + F ++ +IN G
Sbjct: 65 NHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLM 124
Query: 150 TFVALPYLHESNGRVVVNASVENWLPLPR-MSLYASAKAALVTFYESLRFEL 200
+ + + + V+VN S E L S YA+ KAAL +F S EL
Sbjct: 125 SQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKEL 176
|
Length = 266 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 1e-06
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYA---KRKANLVLVAR---RENRLQGSTIDEYNPINEVTLV 101
VV+ITG SS IG +A A ++ + R ++ RL + E +
Sbjct: 1 TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60
Query: 102 SLNNKESKA----------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
+ + +S A VD LV A +G E +++ ++ + D+N +G V
Sbjct: 61 DVCDSKSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSEDAM-ASVFDVNVFGTVRMLQ 119
Query: 152 VALPYLHE-SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND-EVGITIA 209
LP + +GR++V +SV LP +Y ++K AL ESL +L V +++
Sbjct: 120 AFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNVHLSLI 179
Query: 210 THGWIGIE-MTKGKFMLEDGAEMQ 232
G + M K +L E+
Sbjct: 180 ECGPVHTAFMEK---VLGSPEEVL 200
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-06
Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 18/173 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL--- 100
++ KV IITG +S IGE A +AK A V++A ++ + E +++
Sbjct: 1 RLDGKVAIITGGASGIGEATARLFAKHGAR-VVIADIDDDAGQAVAAELGD-PDISFVHC 58
Query: 101 -VSLNNKESKAVDHLV-----------NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
V++ AVD V N LG + T F R+LD+N +G
Sbjct: 59 DVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL 118
Query: 149 PT-FVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
T A + G +V ASV + Y ++K A++ S EL
Sbjct: 119 GTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATEL 171
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 26/178 (14%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP------------- 94
+ VIITG S +GE IA + ++ +++ ++R EN+ ++YN
Sbjct: 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVH 61
Query: 95 -----INEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
NE+ L S+ ++ HL+N A + E ++ + +N +
Sbjct: 62 ELETNFNEI-LSSIQEDNVSSI-HLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMIL 119
Query: 150 TFVALPYLHESNG-RVVVN---ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
T + + + + V+N + +N P S Y S+KA L F +++ E +E
Sbjct: 120 TSTFMKHTKDWKVDKRVINISSGAAKN--PYFGWSAYCSSKAGLDMFTQTVATEQEEE 175
|
Length = 251 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 2e-06
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 30/174 (17%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVSLNNK 106
+ITGASS IG+ A +AK +L LVAR ++ L+ + E + S++
Sbjct: 7 PRALITGASSGIGKATALAFAKAGWDLALVARSQDALE-ALAAELRSTGVKAAAYSIDLS 65
Query: 107 ESKAVDH--------------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+A+ L+N A + +T E S + ++ +N T V
Sbjct: 66 NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLE-MPLSDWQWVIQLNL------TSV 118
Query: 153 ------ALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
LP + G +++N +S+ P+ Y +KAAL F + L E
Sbjct: 119 FQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEE 172
|
Length = 241 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 2e-06
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 33/170 (19%)
Query: 51 IITGASSDIGEQIAYEYAKRKANLVL-------------------VARRENRLQGSTIDE 91
+ITGA S IG A +A+ A++ L R+ L G DE
Sbjct: 59 LITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDE 118
Query: 92 YNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
+ LV KE +D LVN A G +++ D + D F NVY F
Sbjct: 119 -AFCRQ--LVERAVKELGGLDILVNIA--GKQTAVKDIADITT--EQFDATFKTNVYAMF 171
Query: 152 ----VALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESL 196
A+P+L G ++N S++++ P P + YAS KAA+V F ++L
Sbjct: 172 WLCKAAIPHL--PPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKAL 219
|
Length = 300 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS-----TIDEYNP--IN 96
+ K V +TGA+ IG +A + + A ++ + + +D + +
Sbjct: 5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVA 64
Query: 97 EVTLVSLNNKESKAVDHLVNTA---SLG--HTFFFEEVTDTSIFPRLLDINFWG------ 145
+V L E+ +D LVN A +G + E+ T +N G
Sbjct: 65 QVCQRLLA--ETGPLDVLVNAAGILRMGATDSLSDEDWQQT------FAVNAGGAFNLFR 116
Query: 146 NVYPTFVALPYLHESNGRVVVNASVENWLPLPR--MSLYASAKAALVTFYESLRFEL 200
V P F + +G +V S N +PR M+ Y ++KAAL + + + EL
Sbjct: 117 AVMPQFRR-----QRSGAIVTVGS--NAAHVPRIGMAAYGASKAALTSLAKCVGLEL 166
|
Length = 252 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE 107
K + ITGA+S IG A +A + E L + E N T L+ +
Sbjct: 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLA-ALAAELGAGNAWTGA-LDVTD 59
Query: 108 SKAVDH---------------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
A D L N A + FE++ + R++DIN G +
Sbjct: 60 RAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHD-RVIDINVKGVLNGAHA 118
Query: 153 ALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
ALPYL + G V+N +S P +++Y++ K A+ E+L E
Sbjct: 119 ALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLE 166
|
Length = 260 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 50/171 (29%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKR----KANLVLVARRENRLQGSTIDE--------- 91
+ KVV++T A+ G I A+R A +V+ E RL G T DE
Sbjct: 15 LAGKVVLVTAAA---GTGIGSATARRALEEGARVVISDIHERRL-GETADELAAELGLGR 70
Query: 92 -YNPINEVT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINF 143
+ +VT L+ + +D LVN A LG ++TD + R+LD+
Sbjct: 71 VEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDE-WSRVLDVTL 129
Query: 144 WGNVYPTFVALPYLHE--SNGRVVVNASVENWLPLPRMSLYASAKAALVTF 192
G T AL Y+ G +V NASV W + YA+AKA ++
Sbjct: 130 TGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMAL 180
|
Length = 262 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-----------RLQGSTIDEY 92
++ KV ++TG +S IG IA +A + A + L+ R E+ +G D
Sbjct: 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVS 71
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF- 151
+ + V+ +D LVN+A + E+V++ + + +DIN G +F
Sbjct: 72 DSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEED-WDKTIDINLKG----SFL 126
Query: 152 ----VALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALV 190
V + G++V AS + L R Y ++KA +V
Sbjct: 127 MAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVV 169
|
Length = 255 |
| >gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 4e-06
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 24/174 (13%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI----DEYNPINEVTLVSL 103
+VV++ G +G + + R + + EN ++I + +V+
Sbjct: 2 RVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAENEEADASIIVLDSDSFTEQAKQVVAS 61
Query: 104 NNKESKAVDHLVNTA------SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL 157
+ S VD L+ A S F + + + N W + + +A +L
Sbjct: 62 VARLSGKVDALICVAGGWAGGSAKSKSFVKN------WDLMWKQNLWTSFIASHLATKHL 115
Query: 158 HESNGRVVV---NASVENWLPLPRMSLYASAKAALVTFYESLRFELND-EVGIT 207
S G +V+ A++E P P M Y +AKAA+ +SL E + G T
Sbjct: 116 -LSGGLLVLTGAKAALE---PTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGST 165
|
Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 5e-06
Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 29/232 (12%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-----YNPINEVTLVS 102
KV ++TG + IG+ IA AK V VA T E + VS
Sbjct: 1 KVALVTGGAQGIGKGIAERLAKDGFA-VAVADLNEETAKETAKEINQAGGKAVAYKLDVS 59
Query: 103 LNNKESKAVDH----------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
++ A+D +VN A + E+T+ ++ ++N G ++
Sbjct: 60 DKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITE-EELKKVYNVNVKGVLFGIQA 118
Query: 153 ALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT 210
A + G+++ AS+ P +S Y+S K A+ ++ EL + GIT+
Sbjct: 119 AARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPK-GITVNA 177
Query: 211 H--GWIGIEMTKG---KFMLEDGAEMQWK-EEREVHVAGGPV---EDFARLI 253
+ G + M + + G + EE +A G ED A L+
Sbjct: 178 YCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLV 229
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 5e-06
Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 11/160 (6%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN---- 105
+I GA+ IG +A A R L+L R L G + + +
Sbjct: 1 ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARPADVAAELEVWAL 60
Query: 106 -KESKAVDHLVNTAS--LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNG 162
+E +D LV A LG + + R+LD N G AL L
Sbjct: 61 AQELGPLDLLVYAAGAILGKPLARTKPAA---WRRILDANLTGAALVLKHALALLAAG-A 116
Query: 163 RVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
R+V + + LP +S YA+AKAAL + E R E+
Sbjct: 117 RLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVRG 156
|
Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206 |
| >gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85
K ++I GA+SDI A YA A L L AR RL+
Sbjct: 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLE 39
|
Length = 243 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 5e-06
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 19/136 (13%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEV------ 98
DKVVI+TG S IG I + + A +V AR E Q S ++ P +
Sbjct: 9 DKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDV 68
Query: 99 -------TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYP 149
TL+S+ + +D LVN A G + +TS F LL++N
Sbjct: 69 TKEEDIKTLISVTVERFGRIDCLVNNA--GWHPPHQTTDETSAQEFRDLLNLNLISYFLA 126
Query: 150 TFVALPYLHESNGRVV 165
+ ALP+L +S G ++
Sbjct: 127 SKYALPHLRKSQGNII 142
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 5e-06
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----GSTIDEYNPINEVT 99
M+ KV ++TGASS IG+ A A + + ARR ++++ G + +E +
Sbjct: 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEAS 60
Query: 100 LVSLNN---KESKAVDHLVNTASLGHTFFFEEVTDTSIFP-----RLLDINFWGNVYPTF 151
+ + + E +D LVN A G E+V P R ++N +G T
Sbjct: 61 IKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDV------PIDEARRQFEVNLFGAARLTQ 114
Query: 152 VALPYL-HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+ LP++ + +GR++ +S+ + P + Y + K AL F ++LR E+ GI
Sbjct: 115 LVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEV-APFGI 169
|
Length = 273 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 5e-06
Identities = 63/234 (26%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKAN---LVLV---ARRENRLQ------------- 85
++ KV ++TGAS IG IA KR AN LV + R+E +
Sbjct: 2 LKGKVALVTGASRGIGRAIA----KRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF 57
Query: 86 --GSTIDEYNPINEVTLVSLNNKESKAV-----DHLVNTASLGHTFFFEEVTDTSIFPRL 138
G+ ++ + + E SL+N+ D L+N A +G F EE T+ F R+
Sbjct: 58 SIGANLESLHGV-EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTE-QFFDRM 115
Query: 139 LDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRF 198
+ +N + AL L + N R++ +S + LP Y+ K A+ T +L
Sbjct: 116 VSVNAKAPFFIIQQALSRLRD-NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAK 174
Query: 199 ELNDEVGITIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFA 250
+L GIT+ G+I +M +L D Q+ G VED A
Sbjct: 175 QLGAR-GITVNAILPGFIKTDMNAE--LLSDPMMKQYATTISAFNRLGEVEDIA 225
|
Length = 252 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 6e-06
Identities = 47/199 (23%), Positives = 76/199 (38%), Gaps = 20/199 (10%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVSLNN 105
+VV ITG + IG +A +A L+++ R + + + + + +
Sbjct: 270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAA 329
Query: 106 KES---------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156
ES +D LVN A + F F R+ D+N G A
Sbjct: 330 VESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARL 389
Query: 157 LHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT--HGW 213
+ + G V+VN S+ + L LP + Y ++KAA+ SL E GI + T G+
Sbjct: 390 MSQ--GGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPA-GIRVNTVAPGY 446
Query: 214 IGIEMTKGKFMLEDGAEMQ 232
I T L+
Sbjct: 447 I---ETPAVLALKASGRAD 462
|
Length = 520 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 8e-06
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 24/198 (12%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRE------------NRLQGSTIDEYNPI 95
+VV++TGA+ IG +A R + V+VA R +D +
Sbjct: 6 RVVLVTGAAGGIGRAACQRFA-RAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEA 64
Query: 96 NEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPTFVA 153
++E +D LVN A + DT++ F RL IN G A
Sbjct: 65 QIREGFEQLHREFGRIDVLVNNAGVTDPTM-TATLDTTLEEFARLQAINLTGAYLVAREA 123
Query: 154 LPYLHES-NGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIAT 210
L + E +G +VN AS + LP+ + Y+++KAA+++ SL E + + +
Sbjct: 124 LRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVL 183
Query: 211 HGWIGIEM-----TKGKF 223
G++ +M GK
Sbjct: 184 PGYVRTQMVAELERAGKL 201
|
Length = 520 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 8e-06
Identities = 61/235 (25%), Positives = 93/235 (39%), Gaps = 28/235 (11%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP------IN 96
+N++ KV ++TGAS IG IA A A + + R + TI E +
Sbjct: 2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI 61
Query: 97 EVTLVSLNNKE---------------SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDI 141
E L S++ + + +D LVN A +G E T+ IF ++ +
Sbjct: 62 EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTE-EIFDEIMAV 120
Query: 142 NFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201
N + LP L + GRV+ +S E L Y +K AL T L L
Sbjct: 121 NIKAPFFLIQQTLPLL-RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLG 179
Query: 202 DEVGITIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
E GIT+ T G+ ++ +L+D + V G VED A +
Sbjct: 180 -ERGITVNTIMPGYTKTDINAK--LLDDPEIRNFATNSSVFGRIGQVEDIADAVA 231
|
Length = 254 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 9e-06
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 40 FYSEN--MEDKVVIITGASSDIGEQIAYEYAKRKANLVL----------VARRENRLQGS 87
F S+N ++ K IITGA + IG++IA +A A++V+ V +L G
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 88 TID-EYNPINEVTLVSLNNKESKA---VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINF 143
+ +E L +L + VD LVN A G F+ F R ++N
Sbjct: 62 AFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMAD--FRRAYELNV 119
Query: 144 WGNVYPTFVALPYLHESNGRVVVNASV---ENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+ + + + P + ++ G V++ + EN M+ YAS+KAA ++ F+L
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAEN--KNINMTSYASSKAAASHLVRNMAFDL 177
|
Length = 255 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 19/181 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--------------GSTI 89
N+ K ++TGA+ +G A A+ A + +
Sbjct: 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63
Query: 90 DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
D +P + +D LVN A + ++ E+ + ++++N G
Sbjct: 64 DLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDI-DTWDAVMNVNVRGTFLM 122
Query: 150 TFVALPYLHES-NGRVV-VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
ALP+L +S GR+V + + W P++ Y ++K A++ SL EL GIT
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTALW-GAPKLGAYVASKGAVIGMTRSLARELG-GRGIT 180
Query: 208 I 208
+
Sbjct: 181 V 181
|
Length = 250 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 16/157 (10%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE 107
KV ++TG +S IG IA A A +V+ + + + E
Sbjct: 2 KVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTSE 61
Query: 108 SK-------------AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVAL 154
++ +D +V+ A + + E + + R +DIN G+ + A
Sbjct: 62 AQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSL-EDWNRSMDINLTGHFLVSREAF 120
Query: 155 PYLHESN--GRVVVNASVENWLPLPRMSLYASAKAAL 189
+ G +V NAS P P + Y++AKAA
Sbjct: 121 RIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAE 157
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 46/250 (18%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPIN-EVTLVSL 103
K V+ITGAS IG A +A +L LVAR + L+ + + + ++ V + L
Sbjct: 7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDL 66
Query: 104 NNKESKA--------VDHLVNTA------SLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
++ E++ +D LVN A L ++V D + + ++ +G +
Sbjct: 67 SSPEAREQLAAEAGDIDILVNNAGAIPGGGL------DDVDDAA-WRAGWELKVFGYIDL 119
Query: 150 TFVALPYLHESNGRVVVN---ASVENWLPLPRMSLY---ASAKAALVTFYESLRFELNDE 203
T +A P + V+VN A+ EN P Y ++ AAL+ F +L + D+
Sbjct: 120 TRLAYPRMKARGSGVIVNVIGAAGEN----PDAD-YICGSAGNAALMAFTRALGGKSLDD 174
Query: 204 ----VGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGP--VEDFARLIV 254
VG+ +AT + + + + L G E +W+E G P E+ A L+
Sbjct: 175 GVRVVGVNPGPVATDRMLTLLKGRARAEL--GDESRWQELLAGLPLGRPATPEEVADLVA 232
Query: 255 SGACRGDTYV 264
A Y
Sbjct: 233 FLASPRSGYT 242
|
Length = 259 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNPINEVTLV- 101
++ +V ++TGA+ +G IA A+ A++V+ R E + + E
Sbjct: 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAE--ELVEAVEALGRRAQA 60
Query: 102 ---SLNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
+ +K + +D LVN A + +++D ++D+N G
Sbjct: 61 VQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWD-EVIDVNLSG- 118
Query: 147 VYPTF--VALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEV 204
V+ V P + GR+V +SV P S YA+AKA LV ++L EL E
Sbjct: 119 VFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELA-EY 177
Query: 205 GITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
GIT+ G I +M E E + + G G ED AR +
Sbjct: 178 GITVNMVAPGDIDTDMK------EATIEEAREAKDAETPLGRSGTPEDIARAVA 225
|
Length = 249 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 46/177 (25%), Positives = 68/177 (38%), Gaps = 36/177 (20%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLV---------ARRENRLQGSTIDEYNPINEV 98
KV +ITGA+S G A A LVL A E R QG+ + +
Sbjct: 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEV-----LGVR 61
Query: 99 TLVSLNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
T VS + AV L N A +G E + + +L +N WG
Sbjct: 62 TDVS--DAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWE-NSLADWEWVLGVNLWGV 118
Query: 147 VYPTFVALPYLHESN-------GRVVVNASVENWLPLPRMSLYASAKAALVTFYESL 196
++ P + + G +V AS+ L P M +Y +K A+V+ E+L
Sbjct: 119 IHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETL 175
|
Length = 287 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 40/169 (23%), Positives = 62/169 (36%), Gaps = 22/169 (13%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN----EVTLVSLNN 105
++ GASS IG A E A + L ARR + + + + I E L+
Sbjct: 13 ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCE----ELVDKIRADGGEAVAFPLDV 68
Query: 106 KESKAVDHLVN--TASLGHT---------FFFEEV--TDTSIFPRLLDINFWG-NVYPTF 151
+ +V V +LG +F ++ T F + I+ G N T
Sbjct: 69 TDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATA 128
Query: 152 VALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
V + G ++ S P M Y +AKA L +L+ EL
Sbjct: 129 VLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMEL 177
|
Length = 274 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 2e-05
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 49 VVIITGASSDIGEQIAYEYAKRKANLVL----------VARRENRLQGSTID-EYNPINE 97
V I+TG ++ IG+ IA AK A++V+ VA + G I E N +E
Sbjct: 1 VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60
Query: 98 VTLVSLNNK---ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVAL 154
L ++ + + LVN A G F+ F +N + + +
Sbjct: 61 QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120
Query: 155 PYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
P++ ++ G ++N +S+ + R++ Y S+KAA+ +L F+L
Sbjct: 121 PHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDL 167
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 28 CFVNGCEWLYNNFY--SENMED--KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83
F W+Y F ++N++ ++TG + IG+ A++ A++ NLVLVAR ++
Sbjct: 30 FFFTILNWVYVYFLRPAKNLKKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDK 89
Query: 84 LQGST----------------IDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTF--F 125
L+ + +D I+E E V L+N + + + F
Sbjct: 90 LKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARF 149
Query: 126 FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPR---MSLY 182
F EV D + L+ +N G T LP + + ++N + +P ++Y
Sbjct: 150 FHEV-DEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY 208
Query: 183 ASAKAALVTFYESLRFE 199
A+ KA + F L E
Sbjct: 209 AATKAYIDQFSRCLYVE 225
|
Length = 320 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 59/208 (28%), Positives = 85/208 (40%), Gaps = 35/208 (16%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGST---IDEYNPINEVTLVSL 103
KV ++TGA+ IG +I + AK V++ AR R Q + E + + +
Sbjct: 1 KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSV-RFHQLDV 59
Query: 104 NNKES--KAVDH----------LVNTASLGHTFFFEEVTDTSIFP----RLLDINFWGNV 147
+ S A D LVN A F+ D++ + NF+G V
Sbjct: 60 TDDASIEAAADFVEEKYGGLDILVNNAG----IAFKGFDDSTPTREQARETMKTNFFGTV 115
Query: 148 YPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
T LP L +S GR+V +S L Y +KAAL L EL + GI
Sbjct: 116 DVTQALLPLLKKSPAGRIVNVSSGLGSLTSA----YGVSKAALNALTRILAKELKET-GI 170
Query: 207 TI-ATH-GWIGIEMTKGKFML--EDGAE 230
+ A GW+ +M GK E+GAE
Sbjct: 171 KVNACCPGWVKTDMGGGKAPKTPEEGAE 198
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 3e-05
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85
+ DK +++TGAS +GEQ+A YA A ++LVAR + +L+
Sbjct: 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE 44
|
Length = 239 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 22/170 (12%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST------------IDEYNPINE 97
++ITG +S IG +A + + +++ R E RL + + + + E
Sbjct: 8 ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRE 67
Query: 98 VTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLD----INFWGNVYPTFVA 153
LV KE ++ L+N A + E++T + N + T +
Sbjct: 68 --LVEWLKKEYPNLNVLINNAGIQRN---EDLTGAEDLLDDAEQEIATNLLAPIRLTALL 122
Query: 154 LPYLHESNGRVVVNASVE-NWLPLPRMSLYASAKAALVTFYESLRFELND 202
LP+L ++N S ++P+ +Y + KAA+ ++ +LR +L D
Sbjct: 123 LPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKD 172
|
Length = 245 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 4e-05
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 20/176 (11%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVL----------VARRENRLQGSTI-- 89
+DKV I+TGA+ IG+ A A+ A++V+ VA++ G+ I
Sbjct: 1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAV 60
Query: 90 --DEYNPINEVTLVSLNNKESKAVDHLVNTASL--GHTFFFEEVTDTSIFPRLLDINFWG 145
D +P + + +D+LVN A++ G + + + +N G
Sbjct: 61 QVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDG 120
Query: 146 NVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+ T ++ + G +VN +S WL + Y AK L + L EL
Sbjct: 121 ALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY---SNFYGLAKVGLNGLTQQLAREL 173
|
Length = 250 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 4e-05
Identities = 44/165 (26%), Positives = 63/165 (38%), Gaps = 13/165 (7%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLNNK 106
K ++TGAS IGE A + + AR E RL + E + V
Sbjct: 1 KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLAGDVRDEAD 60
Query: 107 ESKAVDH----------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156
+AVD LVN A +G EE+T + +LD N G Y A P
Sbjct: 61 VRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEE-WRLVLDTNLTGAFYCIHKAAPA 119
Query: 157 LHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
L G +VN S+ + Y ++K L+ E+ +L
Sbjct: 120 LLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDL 164
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 37/174 (21%), Positives = 60/174 (34%), Gaps = 16/174 (9%)
Query: 51 IITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKA 110
++ G SS IG +A +A A + + +R +RL + V +L+ + A
Sbjct: 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGG-APVRTAALDITDEAA 59
Query: 111 V----------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES 160
V DH+V TA+ + + +D FWG VA
Sbjct: 60 VDAFFAEAGPFDHVVITAADTPGGPVRAL-PLAAAQAAMDSKFWG---AYRVARAARIAP 115
Query: 161 NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWI 214
G + + P L + AAL L EL V + + G +
Sbjct: 116 GGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA-PVRVNTVSPGLV 168
|
Length = 230 |
| >gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 5e-05
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI----NEVT 99
++ +VV++TG +S +G I + A + ++ + LQ + + +V
Sbjct: 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVR 61
Query: 100 LVSLNNKESKA--------VDHLVNTASL-GHTFFFEEVTDTSI---FPRLLDINFWGNV 147
+ ++KE+ A +D L+ A + ++ ++ D I F + IN G +
Sbjct: 62 SLD-DHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYL 120
Query: 148 YPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
ALP L S G V+ S + P LY +AK A+V + L FEL
Sbjct: 121 LAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFEL 173
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTIDEYNP--IN 96
K +TGA+S IG A A + A L L R + L G T+ E+ I+
Sbjct: 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60
Query: 97 EVTLVSLNNKE----SKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWG--NVY 148
+ V+ + ++D ++N A + + V + + R++D+N G +V
Sbjct: 61 DYDAVAAFAADIHAAHGSMDVVMNIAGIS---AWGTVDRLTHEQWRRMVDVNLMGPIHVI 117
Query: 149 PTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
TFV P + G +VN +S + LP + Y+++K L E LRF+L
Sbjct: 118 ETFVP-PMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDL 169
|
Length = 272 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 6e-05
Identities = 47/227 (20%), Positives = 79/227 (34%), Gaps = 18/227 (7%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-------------RLQGSTIDE 91
+ +V I+TGA S IG A +A+ A +V+ R R D
Sbjct: 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDV 62
Query: 92 YNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
+ LV +D LVN A G TD + + ++ +N G
Sbjct: 63 GSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVT-TDEADWDAVMRVNVGGVFLWAK 121
Query: 152 VALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGITIA 209
A+P + G +VN AS + Y ++K A+ + ++ + D + +
Sbjct: 122 YAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAV 181
Query: 210 THGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
G I + F E + R H G E+ A+ +
Sbjct: 182 APGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAAL 228
|
Length = 252 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 6e-05
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-- 105
KV +IT A+ IG IA +A+ AN++ E +L+ ++ I L +
Sbjct: 3 KVALITAAAQGIGRAIALAFAREGANVIATDINEEKLK--ELERGPGITTRVLDVTDKEQ 60
Query: 106 -----KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP-YLHE 159
KE +D L N A H + D + +++N LP L
Sbjct: 61 VAALAKEEGRIDVLFNCAGFVHHGSILDCEDDD-WDFAMNLNVRSMYLMIKAVLPKMLAR 119
Query: 160 SNGRVVVNASVENWLP-LPRMSLYASAKAALVTFYESL 196
+G ++ +SV + + +P +Y++ KAA++ +S+
Sbjct: 120 KDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSV 157
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 7e-05
Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 22/178 (12%)
Query: 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN---- 96
+ KV ++TGA+ IG IA +A+ A + L + + +
Sbjct: 1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARV 60
Query: 97 -----EVT-------LVSLNNKESKAVDHLVNTASLGHTFFFE--EVTDTSIFPRLLDIN 142
+VT V+ + +D LVN A G F + +TD + R ++
Sbjct: 61 LAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNA--GINVFADPLAMTDED-WRRCFAVD 117
Query: 143 FWGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
G LP + E +VN AS + +P Y AK L+ +L E
Sbjct: 118 LDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIE 175
|
Length = 260 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 7e-05
Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 21/174 (12%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT--LVS 102
++ +V +ITG S +G + + A + ++ R ++ D + + V + S
Sbjct: 2 LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRS 61
Query: 103 LNNKESKAVDHLVNTASLGH--TF--------FFEEVTDTS------IFPRLLDINFWGN 146
L + E +AV V G F + + D F L IN G
Sbjct: 62 LADNE-RAVARCV--ERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGY 118
Query: 147 VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+ ALP L+ + G V+ S + P LY ++K A+V + L +EL
Sbjct: 119 ILGAKAALPALYATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYEL 172
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 8e-05
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 16/87 (18%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-------LQGSTIDEYNPINEVTL 100
K VIITGA++ IG++ A E A+R A +++ R + ++ T++ + + L
Sbjct: 2 KTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDL 61
Query: 101 VSLNN---------KESKAVDHLVNTA 118
SL + E +D L+N A
Sbjct: 62 ASLKSIRAFAAEFLAEEDRLDVLINNA 88
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 9e-05
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 36/175 (20%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
ME +ITGAS IG IA E A L+L R RL + P V L
Sbjct: 1 MERPTALITGASRGIGAAIARELAPTH-TLLLGGRPAERLD--ELAAELPGATPFPVDLT 57
Query: 105 NKESKA--------VDHLVNTA---SLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPTF 151
+ E+ A +D LV+ A LG V ++++ + L++N T
Sbjct: 58 DPEAIAAAVEQLGRLDVLVHNAGVADLGP------VAESTVDEWRATLEVNVVAPAELTR 111
Query: 152 VALPYLHESNGRVV-------VNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
+ LP L ++G VV + A+ P YA++K AL ++LR E
Sbjct: 112 LLLPALRAAHGHVVFINSGAGLRAN-------PGWGSYAASKFALRALADALREE 159
|
Length = 227 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 27/179 (15%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST--IDEYNPINEVT 99
S KV ++TG ++ IG A +A+ A +V+ R + + I E E
Sbjct: 2 SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG--GEAL 59
Query: 100 LVSLNNKESKAVDHLVN--TASLGH-TFFFE----EVTDTSI-------FPRLLDINFWG 145
V+ + V LV A+ G + F E+ + F ++ +N G
Sbjct: 60 FVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKG 119
Query: 146 NVYPTFVALPY-----LHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
++ + Y L + G +V ASV P+MS+YA++K A++ +S E
Sbjct: 120 ----VWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIE 174
|
Length = 253 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 35/182 (19%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN------- 96
+++ +V +TGA S IG++IA A+ A++ L R + T +
Sbjct: 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIA 64
Query: 97 -EVT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+VT V+ E A+ VN A + + EE+ + + ++DIN G V+
Sbjct: 65 ADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQ-WQTVMDINLTG-VF 122
Query: 149 PTFVALPYLHESNGR-----------VVVNASVENWLPLPRMSLYASAKAALVTFYESLR 197
+ A NG ++VN + + Y ++KA ++ +SL
Sbjct: 123 LSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQ-------AHYNASKAGVIHLSKSLA 175
Query: 198 FE 199
E
Sbjct: 176 ME 177
|
Length = 254 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85
++DKV++ITG + +G +A A++ A L L+ + +L+
Sbjct: 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLE 43
|
Length = 253 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 43/159 (27%), Positives = 62/159 (38%), Gaps = 17/159 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR--RENRLQGSTIDEYNPINEVTLV 101
N++DKVVI+TG +S IG I+ A+ A V+ R ++ + P E V
Sbjct: 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEE-LRALQPRAEFVQV 62
Query: 102 SLNNKES--KAVDH----------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
L + AV+ LVN A + E + F L+ N
Sbjct: 63 DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREA--FVASLERNLIHYYVM 120
Query: 150 TFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188
LP+L S G +V +S S YA+AK A
Sbjct: 121 AHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGA 159
|
Length = 258 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 22/109 (20%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL---------QGST-------- 88
EDK+++ITGA+ IG+ A L+L L
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60
Query: 89 IDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFF---FEEVTDTSI 134
I I E+ + S K + +D L+N A + FEE
Sbjct: 61 ITSKESIKEL-IESYLEKFGR-IDILINNAYPSPKVWGSRFEEFPYEQW 107
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 31/176 (17%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
++ K +ITG +S IG + A ++ A + + R L+ + + + E LV +
Sbjct: 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE----LGESALV-IR 58
Query: 105 NKESKAVDHLVNTASLGHTF------F----------FEEVTDTSIFPRLLDINFWGNVY 148
+L F F E+ D ++F R + N G
Sbjct: 59 ADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDW-DEAMFDRSFNTNVKG--- 114
Query: 149 PTFVA---LPYLHESNG-RVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
P F+ LP L +N +V+N S+ + +P S+YA++KAAL++ ++L EL
Sbjct: 115 PYFLIQALLPLL--ANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGEL 168
|
Length = 249 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85
KVVIITG SS +G+ +A +A+ AN+V+ R + +L+
Sbjct: 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLE 39
|
Length = 252 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 51/170 (30%), Positives = 70/170 (41%), Gaps = 28/170 (16%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARREN---RLQGSTIDEYNPI----NEVTL 100
K V++TGASS IG A A+R A +V AR RL G T E P+ +
Sbjct: 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCE--PLRLDVGDDAA 67
Query: 101 VSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPTFVALPYLH 158
+ + A D LVN A + E D + F R++ +N G AL H
Sbjct: 68 IRAALAAAGAFDGLVNCAGIA---SLESALDMTAEGFDRVMAVNARG------AALVARH 118
Query: 159 ESNGRV-------VVNASVENWL-PLPRMSLYASAKAALVTFYESLRFEL 200
+ + +VN S + L LP Y ++KAAL L EL
Sbjct: 119 VARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVEL 168
|
Length = 245 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--------------NP 94
+V++TGA++ GE I + ++ ++ RR+ RLQ DE
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ-ELKDELGDNLYIAQLDVRNRAA 60
Query: 95 INEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPTFV 152
I E+ ++ E + +D LVN A L E S+ + ++D N G VY T
Sbjct: 61 IEEM--LASLPAEWRNIDVLVNNAGLA--LGLEPAHKASVEDWETMIDTNNKGLVYMTRA 116
Query: 153 ALPYLHESNGRVVVN--ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
LP + E N ++N ++ +W P ++Y + KA + F +LR +L
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSW-PYAGGNVYGATKAFVRQFSLNLRTDL 165
|
Length = 248 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 23/202 (11%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-----NRLQGSTIDEYNPINE 97
+ K V+ITGA+S IG A + + A + V +++ +D + +
Sbjct: 1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEP 60
Query: 98 VTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPTFVALP 155
+ +VD L NTA G ++ + DTS+ + + D N T LP
Sbjct: 61 LF------DWVPSVDILCNTA--GILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLP 112
Query: 156 YLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI---TIATH 211
+ E +++N S+ +++ + Y ++K AL F + L + + GI IA
Sbjct: 113 QMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKD-GIQVFGIAP- 170
Query: 212 GWIGIEMTKGKFMLEDGAEMQW 233
G + MT F E G W
Sbjct: 171 GAVKTPMTAADF--EPGGLADW 190
|
Length = 235 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 18/171 (10%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL---- 100
++ KV ++TGA+S IGE +A Y A +V+ + R + + ++ V+L
Sbjct: 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR 63
Query: 101 -------VSLNNKESKAVDHLVNTASLGHTFFFEEVTDTS--IFPRLLDINFWGNVYPTF 151
V+ + +D L N A+L F + D S + RL +N G +
Sbjct: 64 QDSIDRIVAAAVERFGGIDILFNNAAL---FDMAPILDISRDSYDRLFAVNVKGLFFLMQ 120
Query: 152 VALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
++ E G+++ AS +S Y + KAA++++ +S L
Sbjct: 121 AVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALAL 171
|
Length = 257 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 4e-04
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 22/190 (11%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN---N 105
++TGAS IG IA + AK A +++ R ++E + V +
Sbjct: 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60
Query: 106 KESKA-----------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT-FVA 153
++ KA +D LVN A + + + + ++D N G T V
Sbjct: 61 EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEED-WDAVIDTNLTGVFNLTQAVL 119
Query: 154 LPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---IAT 210
+ + +GR++ +SV + + YA++KA ++ F +SL EL IT +A
Sbjct: 120 RIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASR-NITVNAVAP 178
Query: 211 HGWIGIEMTK 220
G+I +MT
Sbjct: 179 -GFIDTDMTD 187
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 4e-04
Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 34/247 (13%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVL-------------------VARREN 82
S ++D+ ++TG S IG A YA+ A++ + R+
Sbjct: 44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAV 103
Query: 83 RLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTD--TSIFPRLLD 140
L G DE +LV +K +D + A G ++ D + F +
Sbjct: 104 LLPGDLSDEKF---ARSLVHEAHKALGGLDIMALVA--GKQVAIPDIADLTSEQFQKTFA 158
Query: 141 INFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
IN + + T A+P L ++ +S++ + P P + YA+ KAA++ + L ++
Sbjct: 159 INVFALFWLTQEAIPLL-PKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQV 217
Query: 201 NDE-VGITIATHG--WIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257
++ + + I G W ++++ G+ +D Q+ ++ + AG P E A + V A
Sbjct: 218 AEKGIRVNIVAPGPIWTALQISGGQ--TQDKIP-QFGQQTPMKRAGQPAE-LAPVYVYLA 273
Query: 258 CRGDTYV 264
+ +YV
Sbjct: 274 SQESSYV 280
|
Length = 294 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 5e-04
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 43/157 (27%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN---RLQGSTIDEYNPINEVT- 99
++ K + ITGAS IG IA A+ AN+V+ A+ +L G TI + E+
Sbjct: 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPG-TI--HTAAEEIEA 59
Query: 100 --------LVSLNNKES------KAVDH------LVNTAS---LGHTFFFEEVTDTSIFP 136
+ + +++ KAV+ VN AS L T E T F
Sbjct: 60 AGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGT----EDTPMKRFD 115
Query: 137 RLLDINFWGNVYPTFV----ALPYLHES-NGRVVVNA 168
+ IN G TF+ LP+L +S N ++ +
Sbjct: 116 LMQQINVRG----TFLVSQACLPHLKKSENPHILTLS 148
|
Length = 273 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 50/181 (27%), Positives = 63/181 (34%), Gaps = 28/181 (15%)
Query: 48 KVVIITGASSDIGEQI-----------AYEYAKRKANLVLVARRENRLQGSTI----DEY 92
KV I+TGAS IG I A YA A + G I D
Sbjct: 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVA 65
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPT 150
+ L +D LVN A + D + F R + N G
Sbjct: 66 DAAAVTRLFDAAETAFGRIDVLVNNAG---VMPLGTIADFDLEDFDRTIATNLRG----A 118
Query: 151 FVAL--PYLHESNGRVVVNASVE-NWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
FV L H G ++N S LPLP YA++KAA+ L EL GIT
Sbjct: 119 FVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGR-GIT 177
Query: 208 I 208
+
Sbjct: 178 V 178
|
Length = 245 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 48/172 (27%), Positives = 66/172 (38%), Gaps = 31/172 (18%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL-----QGST---IDEYNPINEVT 99
VV+ITG SS IG +A + + AR+ + G T +D +
Sbjct: 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALAR 61
Query: 100 LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDI-------NFWGNVYP--- 149
L E +D L+N A G ++ P LLD F NV+
Sbjct: 62 LAEELEAEHGGLDVLINNAGYG-----------AMGP-LLDGGVEAMRRQFETNVFAVVG 109
Query: 150 -TFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
T P L S G VV SV L P Y ++KAA+ ++LR EL
Sbjct: 110 VTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLEL 161
|
Length = 274 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 27/180 (15%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVL--------------VARRENRLQGSTIDEYN 93
K ++ITGA S G ++A A++ N++ ARR L+ +D +
Sbjct: 3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD 62
Query: 94 PINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTD--TSIFPRLLDINFWGNVYPT- 150
I+ + VD L+N A +G V D + L + N +G + T
Sbjct: 63 AIDRAQAAEWD------VDVLLNNAGIGEA---GAVVDIPVELVRELFETNVFGPLELTQ 113
Query: 151 FVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT 210
+ G+VV +S+ + P Y ++K AL E++ EL GI +AT
Sbjct: 114 GFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELK-PFGIQVAT 172
|
Length = 257 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 57/229 (24%), Positives = 89/229 (38%), Gaps = 35/229 (15%)
Query: 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQG---------STID 90
+ + K ++TG + IG + A +V AR R + L +T +
Sbjct: 3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAE 62
Query: 91 EYNPINEVTLVSLNNKESKAVDHLVNTA--SLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ L L VD LV+ S F +TD L++N V
Sbjct: 63 GCAAVARAVLERLG-----GVDILVHVLGGSSAPAGGFAALTDEEWQ-DELNLNLLAAVR 116
Query: 149 PTFVALPYLHESNGRVVVN-ASVENWLPLPRMSL-YASAKAALVTFYESLRFELNDEVGI 206
LP + V+++ S++ LPLP + YA+AKAAL T+ +SL E+ + G+
Sbjct: 117 LDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPK-GV 175
Query: 207 TIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLI 253
+ T GWI T+ L ER AG E ++I
Sbjct: 176 RVNTVSPGWI---ETEAAVAL---------AERLAEAAGTDYEGAKQII 212
|
Length = 260 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 7e-04
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 17/179 (9%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVL--------------VARRENRLQGSTID 90
++DK I+TG IG +A+ A + + + + Q D
Sbjct: 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60
Query: 91 EYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+ + T V+ + VD LVN A F + T+ ++ RL+ IN G ++
Sbjct: 61 ITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTK-TEPPLWERLIAINLTGALHMH 119
Query: 151 FVALPYLHE-SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
LP + E GR+V AS + ++YA+ K LV F +++ E GIT+
Sbjct: 120 HAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARH-GITV 177
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 8e-04
Identities = 60/293 (20%), Positives = 104/293 (35%), Gaps = 57/293 (19%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------- 97
+ K+ ++TGAS IG IA + + A + + R T +E I
Sbjct: 1 LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEE---IEARGGKCIP 57
Query: 98 VTLVSLNNKESKAV------------DHLVNTASLGHTF--------FFEEVTDTSIFPR 137
V ++ E +A+ D LVN A F+EE +I+
Sbjct: 58 VRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEE--PPTIWDD 115
Query: 138 LLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLR 197
+ ++ + + A P + ++ ++V S L Y KAA+ +
Sbjct: 116 INNVGLRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVAYGVGKAAIDRMAADMA 175
Query: 198 FELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQW-KEEREVHVAGGPVEDFARLIVSG 256
EL G+ + + W G T+ + + E W +ER+ + G E R +V+
Sbjct: 176 HELKPH-GVAVVSL-WPGFVRTELVLEMPEDDEGSWHAKERDAFLNGETTEYSGRCVVAL 233
Query: 257 ACRGDTYVKFPSWYDVFLLYRVFAPHVLNWTFRLLISSEGARRTSLIGT-GRP 308
A D P ++ + R+LI+ E AR GR
Sbjct: 234 A--AD-------------------PDLMELSGRVLITGELAREYGFTDVDGRQ 265
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 8e-04
Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 9/159 (5%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS----TIDEYNPINEVTLVSLNN 105
VI+TGA+ IG +A + A ++ + L + + + + + +
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPLDVADAAAVREVCS 60
Query: 106 K---ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNG 162
+ E +D LVN A + + ++ + + +N G P++ +
Sbjct: 61 RLLAEHGPIDALVNCAGVLRPGATDPLSTED-WEQTFAVNVTGVFNLLQAVAPHMKDRRT 119
Query: 163 RVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+V AS +P M+ Y ++KAAL + + L EL
Sbjct: 120 GAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLEL 158
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 8e-04
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 25/165 (15%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTLVS 102
++D+V ++TGA +G IA +A+ A++++ AR E++L I V
Sbjct: 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAAD 67
Query: 103 LNNKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP- 149
L + E+ +AV+ +VN ++G T + TS + L F NV
Sbjct: 68 LAHPEATAGLAGQAVEAFGRLDIVVN--NVGGT-MPNPLLSTS--TKDLADAFTFNVATA 122
Query: 150 ---TFVALPYL--HESNGRVVVNASVENWLPLPRMSLYASAKAAL 189
T A+P + H G V+ +S L + Y +AKAAL
Sbjct: 123 HALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAAL 167
|
Length = 263 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 14/41 (34%), Positives = 28/41 (68%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85
++D+++++TGA IG + A YA+ A ++L+ R E +L+
Sbjct: 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLE 50
|
Length = 247 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.001
Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 12/170 (7%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR------LQGSTIDEYNPINEV 98
M + V++TGA+ IG ++ A ++ +AR D
Sbjct: 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQ--TAA 58
Query: 99 TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLH 158
TL +N E VD +VN + ++ ++ + D+N V T L +
Sbjct: 59 TLAQIN--EIHPVDAIVNNVGIALPQPLGKIDLAALQ-DVYDLNVRAAVQVTQAFLEGMK 115
Query: 159 ESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
+VN + Y++AK+ALV + EL E GIT+
Sbjct: 116 LREQGRIVNICSRAIFGALDRTSYSAAKSALVGCTRTWALELA-EYGITV 164
|
Length = 234 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85
++ K ++TG S +G QIA + A +VL AR+ L+
Sbjct: 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELE 50
|
Length = 259 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81
KVV++TGA+ IG +A A A +VLV R E
Sbjct: 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE 42
|
Length = 260 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.003
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85
+ D+++++TGAS IG + A YA+ A ++L+ R E +L+
Sbjct: 2 LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLR 42
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 37/175 (21%), Positives = 65/175 (37%), Gaps = 22/175 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ----------------GS 87
++ + +ITGAS IG IA E+ A++++VAR + L G
Sbjct: 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65
Query: 88 TIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWG 145
D + + ++ + LVN A + D + + + + N +
Sbjct: 66 AADVSDDEDRRAILDWVEDHWDGLHILVNNAG---GNIRKAAIDYTEDEWRGIFETNLFS 122
Query: 146 NVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
+ A P L + +VN SV + + Y KAAL+ +L E
Sbjct: 123 AFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVE 177
|
Length = 257 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 45/189 (23%), Positives = 72/189 (38%), Gaps = 39/189 (20%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVL---------------VARRENRLQGSTIDEY 92
+VV++TGAS +G IA +A+ A +V+ R +Q D
Sbjct: 1 QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDR- 59
Query: 93 NPINEVT-LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
++V ++ VD +VN A + F D +D +
Sbjct: 60 ---DQVQAMIEEAKNHFGPVDTIVNNALID----FPFDPDQRKTFDTIDWEDYQQQLEGA 112
Query: 152 V---------ALPYLHE-SNGRVVVNAS--VENWLPLPRMSLYASAKAALVTFYESLRFE 199
V LP E +GRV+ + +N P+ Y +AKAAL+ F ++ E
Sbjct: 113 VKGALNLLQAVLPDFKERGSGRVINIGTNLFQN--PVVPYHDYTTAKAALLGFTRNMAKE 170
Query: 200 LNDEVGITI 208
L GIT+
Sbjct: 171 LGPY-GITV 178
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 28/146 (19%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARREN---RLQGSTIDEYNPINEV------ 98
K + ITGAS IG+ IA + A+ AN+V+ A+ +L G+ I
Sbjct: 4 KTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALP 63
Query: 99 TLVSLNNKES------KAV------DHLVNTAS---LGHTFFFEEVTDTSIFPRLLDINF 143
+V + +++ KAV D LVN AS L T T + ++ +N
Sbjct: 64 CIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGT----LDTPMKRYDLMMGVNT 119
Query: 144 WGNVYPTFVALPYLHESNGRVVVNAS 169
G + LPYL +S ++N S
Sbjct: 120 RGTYLCSKACLPYLKKSKNPHILNLS 145
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.003
Identities = 51/193 (26%), Positives = 79/193 (40%), Gaps = 36/193 (18%)
Query: 51 IITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTLVSLNNKES 108
++TGAS IGE+IA + A + L R +L+ + + E I L + E
Sbjct: 10 LVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLS--DRDEV 67
Query: 109 KA-----------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY-----PTF- 151
KA VD LVN A +T +F R+ D + W +V TF
Sbjct: 68 KALGQKAEADLEGVDILVNNAG---------ITKDGLFVRMSDED-WDSVLEVNLTATFR 117
Query: 152 ----VALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGI 206
+ P + GR++ SV P + Y ++KA ++ F +SL E+ V +
Sbjct: 118 LTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTV 177
Query: 207 TIATHGWIGIEMT 219
G+I MT
Sbjct: 178 NCVAPGFIESAMT 190
|
Length = 245 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.004
Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 21/180 (11%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN---EVTLVSL 103
+V I+T + S IG+ A A++ ++ + + T +E E+ + L
Sbjct: 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDL 61
Query: 104 NNKE--SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINF--WGNVYPTFVALPYL-- 157
++ ++A+D L+ LG LD++F W ++ V +L
Sbjct: 62 SDLPEGAQALDKLIQR--LGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCS 119
Query: 158 ---------HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
GR++ SV PLP S Y +AK AL +++ EL E GI +
Sbjct: 120 QIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELV-EHGILV 178
|
Length = 256 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 38.0 bits (88), Expect = 0.004
Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 26/183 (14%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID----EYNPINEVT- 99
++ K +ITG++ IG A Y + A + + + + + +VT
Sbjct: 1 LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60
Query: 100 ------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTS--IFPRLLDINFWGNVYP-T 150
V+ ++D LVN A+L F + D + + RL IN G ++
Sbjct: 61 QASIDRCVAALVDRWGSIDILVNNAAL---FDLAPIVDITRESYDRLFAINVSGTLFMMQ 117
Query: 151 FVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIA 209
VA + + G ++N AS + +Y + KAA+++ +S G+ +
Sbjct: 118 AVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQS--------AGLNLI 169
Query: 210 THG 212
HG
Sbjct: 170 RHG 172
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 349 | |||
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.98 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.98 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.98 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.98 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.98 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.98 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.97 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.97 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.97 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.97 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.97 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.97 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.97 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.97 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.97 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.97 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.97 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.97 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.97 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.97 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.97 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.97 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.97 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.97 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.97 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.97 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.97 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.97 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.97 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.97 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.97 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.96 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.96 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.96 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.96 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.96 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.96 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.96 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.96 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.96 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.96 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.96 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.95 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.95 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.95 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.95 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.95 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.95 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.95 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.95 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.94 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.94 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.94 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.92 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.92 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.88 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.87 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.85 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.85 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.85 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.81 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.8 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.8 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.79 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.79 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.78 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.77 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.76 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.76 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.75 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.75 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.74 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.72 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.71 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.71 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.7 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.7 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.7 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.63 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.62 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.62 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.62 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.62 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.61 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.61 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.59 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.59 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.56 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.56 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.54 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.52 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.52 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.52 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.49 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.48 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.47 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.47 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.46 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.46 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.45 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.44 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.42 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.4 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.38 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.38 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.37 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.37 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.36 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.34 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.33 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.31 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.3 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.27 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.23 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.2 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.16 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.16 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.09 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.09 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.08 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.07 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.06 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.04 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.03 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.01 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.99 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.96 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.92 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 98.89 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.87 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 98.82 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 98.82 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.76 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.74 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.56 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.43 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.37 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.34 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.34 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.32 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.27 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.26 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.24 | |
| PLN00106 | 323 | malate dehydrogenase | 98.23 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.2 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.17 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.16 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.06 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.05 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 98.04 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.99 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.96 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.88 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.85 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.82 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.81 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.79 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 97.77 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.73 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.73 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.72 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.7 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.65 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.61 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.54 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.52 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.48 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.47 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.46 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.43 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.42 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 97.38 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 97.3 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.3 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.27 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.24 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.18 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.18 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.15 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 97.13 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.11 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 97.11 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.1 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.08 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.06 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.05 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.03 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.97 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.94 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 96.94 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.92 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.91 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 96.89 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.89 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.88 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.87 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.87 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.87 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.84 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.8 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.77 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.76 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.7 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.67 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.66 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.6 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.6 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.58 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.57 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.55 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.55 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.54 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.49 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.46 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.44 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.44 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 96.44 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.36 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.35 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.35 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.34 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.33 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.32 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.31 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 96.26 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.26 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.23 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 96.18 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.13 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.12 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.1 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 96.07 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.02 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.01 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 96.01 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.98 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.94 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 95.89 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 95.87 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.87 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 95.86 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.86 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 95.84 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.83 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 95.81 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.81 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 95.77 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.72 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 95.71 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 95.69 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 95.69 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.69 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 95.67 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 95.65 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 95.62 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 95.61 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 95.58 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.55 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.54 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.53 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 95.51 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 95.48 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 95.47 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 95.4 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.36 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 95.33 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.32 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.31 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.31 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.3 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.29 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 95.24 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 95.24 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.21 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 95.19 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.17 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 95.17 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.16 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 95.16 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.11 | |
| PTZ00079 | 454 | NADP-specific glutamate dehydrogenase; Provisional | 95.09 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 95.09 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.06 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.06 | |
| PRK02006 | 498 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.05 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 95.04 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.03 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.0 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.96 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.95 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.93 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 94.93 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.92 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 94.92 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 94.91 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 94.89 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.89 | |
| PRK00421 | 461 | murC UDP-N-acetylmuramate--L-alanine ligase; Provi | 94.89 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 94.88 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 94.85 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 94.84 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.82 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 94.82 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 94.81 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 94.78 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.76 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 94.73 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 94.72 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 94.72 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 94.71 | |
| PLN02494 | 477 | adenosylhomocysteinase | 94.68 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 94.67 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.63 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 94.62 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 94.6 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 94.59 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.57 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 94.56 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 94.53 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.53 | |
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 94.44 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 94.38 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 94.33 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 94.3 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 94.28 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 94.24 | |
| COG0771 | 448 | MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas | 94.22 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 94.2 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 94.19 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 94.19 | |
| PLN02477 | 410 | glutamate dehydrogenase | 94.19 | |
| COG5322 | 351 | Predicted dehydrogenase [General function predicti | 94.18 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.13 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 94.12 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 94.11 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 94.11 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 94.08 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 94.07 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 93.99 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.98 | |
| PRK04690 | 468 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.94 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 93.93 |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-45 Score=322.77 Aligned_cols=242 Identities=25% Similarity=0.276 Sum_probs=205.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d--------------~~~ 107 (349)
..+++|+++|||||+|||+++|++|+++|++|++++|++++++++++++. ..+..+.++++| .+.
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 35678999999999999999999999999999999999999999999994 345678889999 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
.+.||+||||||++..+++.+. ++++.++++++|+.+...++++++|.|.+++ |+||||+|.+|+.|.|.++.|++||
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~-~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK 160 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLEL-SLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK 160 (265)
T ss_pred CCcccEEEECCCcCCccchhhC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence 4689999999999999999997 5788999999999999999999999997664 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++.+|+++|+.|+++. |+|.++|||++.|++++...... ....+....++||++|+.++..+.++++++.
T Consensus 161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~--------~~~~~~~~~~~~~~va~~~~~~l~~~k~~ii 232 (265)
T COG0300 161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDV--------YLLSPGELVLSPEDVAEAALKALEKGKREII 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccccccc--------ccccchhhccCHHHHHHHHHHHHhcCCceEe
Confidence 99999999999999988 99999999999999986211100 1112345789999999999999999999999
Q ss_pred cCchHHHHH-HHHHhchHHHHHHHHHhcc
Q 039397 266 FPSWYDVFL-LYRVFAPHVLNWTFRLLIS 293 (349)
Q Consensus 266 ~p~~~~~~~-~~~~~~P~~~~~~~~~l~~ 293 (349)
.|.|..... ..+...|.+..++.++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (265)
T COG0300 233 PGLPNKALALSFRLLPRSLREKLAGKIFK 261 (265)
T ss_pred cChhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 995555444 4444444566676666543
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=311.14 Aligned_cols=214 Identities=28% Similarity=0.337 Sum_probs=184.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
..+++|+++|||||+|||.++|++|+++|++|++++|+.+++++++.++.. ..+.....| .+++
T Consensus 2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 356789999999999999999999999999999999999999999998854 456666666 5678
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||.....++.+. +.++|++|+++|+.|.++.+++++|.|.+++ |+|||+||++|..++|+.+.||++|+
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~-~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~ 158 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEA-DLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA 158 (246)
T ss_pred CcccEEEecCCCCcCChhhhC-CHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence 999999999999988888776 6799999999999999999999999997765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++.+|++.|+.|+.++ |||++|+||.+.|..........+. ............++|||+|+.|.+.++.++.
T Consensus 159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~---~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 159 AVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDD---ERADKVYKGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchh---hhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence 9999999999999988 9999999999977765544332211 1111112344688999999999999998754
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=323.26 Aligned_cols=244 Identities=38% Similarity=0.516 Sum_probs=199.2
Q ss_pred ccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCC-eEEEEEec------------
Q 039397 39 NFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPIN-EVTLVSLN------------ 104 (349)
Q Consensus 39 ~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~-~~~~~~~d------------ 104 (349)
+..++++.||+|+|||||+|||+++|++|+++|++++++.|+.++++.+.+++ ..... ++..+++|
T Consensus 4 ~~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~ 83 (282)
T KOG1205|consen 4 NLFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVE 83 (282)
T ss_pred cccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999887776 22223 58899999
Q ss_pred --cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchh
Q 039397 105 --NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 105 --~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~ 181 (349)
..++|++|+||||||+.. ..+.+..+.++++.+||+|++|+++++|+++|+|++++ |+||++||++|..+.|..+.
T Consensus 84 ~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~ 162 (282)
T KOG1205|consen 84 WAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSI 162 (282)
T ss_pred HHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccc
Confidence 368899999999999999 55665567789999999999999999999999998887 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC---eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 182 YASAKAALVTFYESLRFELNDE---VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~---I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
|+|||+|+.+|+++|+.|+.+. |++ +|+||+|+|++.........+.......... ..... ++.++..+..-..
T Consensus 163 Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~~~~~ 239 (282)
T KOG1205|consen 163 YSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLGEEGKSQQGPFLRT-EDVAD-PEAVAYAISTPPC 239 (282)
T ss_pred cchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhccccccccccchhhh-hhhhh-HHHHHHHHhcCcc
Confidence 9999999999999999999986 566 8999999999877654443331000000000 00011 5566666666666
Q ss_pred cCC-ceEEcCchHHHHHHHHHhchHHHHH
Q 039397 259 RGD-TYVKFPSWYDVFLLYRVFAPHVLNW 286 (349)
Q Consensus 259 ~~~-~~i~~p~~~~~~~~~~~~~P~~~~~ 286 (349)
... .++..|.|.....+++.+.|.+..|
T Consensus 240 ~~~~~~~~~p~~~~~~~~~~~~~p~~~~~ 268 (282)
T KOG1205|consen 240 RQVEDIIIAPSWEKLAFLLRTLCPELLFW 268 (282)
T ss_pred cchhheeecccccchhhhhhhhcchHHHh
Confidence 554 5778899999999999999998888
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-43 Score=309.70 Aligned_cols=241 Identities=25% Similarity=0.273 Sum_probs=214.7
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
...+.+|++||||||++|+|+++|.+|+++|+++++.|.+++..+++.+.+...+ .+....|| .+
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999999999999999888885543 78899999 57
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc-CCCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-SNGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
+.|.+|+||||||+....++.+.++ +++++++++|+.|+++++|+++|.|.+ ++|+||+|+|++|..+.++...||+|
T Consensus 111 e~G~V~ILVNNAGI~~~~~ll~~~d-~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaS 189 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIVTGKKLLDCSD-EEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCAS 189 (300)
T ss_pred hcCCceEEEeccccccCCCccCCCH-HHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhh
Confidence 7899999999999999999999755 889999999999999999999999976 55999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC----eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 186 KAALVTFYESLRFELNDE----VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~----I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
|+|+.+|.++|..|+... |+.+.+||++++|.|.+.. . .........+|+.+|+.|+.++..++
T Consensus 190 K~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~---~---------~~~~l~P~L~p~~va~~Iv~ai~~n~ 257 (300)
T KOG1201|consen 190 KFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGA---T---------PFPTLAPLLEPEYVAKRIVEAILTNQ 257 (300)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCC---C---------CCccccCCCCHHHHHHHHHHHHHcCC
Confidence 999999999999999643 9999999999999999861 1 12234578899999999999999999
Q ss_pred ceEEcCchHHHHHHHHHhchHHHHHHHHHhcccc
Q 039397 262 TYVKFPSWYDVFLLYRVFAPHVLNWTFRLLISSE 295 (349)
Q Consensus 262 ~~i~~p~~~~~~~~~~~~~P~~~~~~~~~l~~~~ 295 (349)
..+..|+.+..+..+.+++|.-....++++....
T Consensus 258 ~~~~~P~~~~~~~~l~~~lP~~~~~l~~~F~~~~ 291 (300)
T KOG1201|consen 258 AGLLIPPFYYLFVPLLRLLPYKALLLMLDFSGTD 291 (300)
T ss_pred cccccHHHHHHHHHHHhhCCHHHHHHHHHHcCCC
Confidence 9999999999999999999976544446665443
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=277.80 Aligned_cols=218 Identities=19% Similarity=0.191 Sum_probs=189.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
.++.|+++||||++|||+++++.|+++|++|++.+++.+..++++.++... .+...+.|| .+.+|
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 356689999999999999999999999999999999999888888877443 355667888 45678
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccc--ccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL--HESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m--~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
++++||||||+........+. .++|+..+.+|+.|.|.++|++...| .+++ ++|||+||+-|..+.-+++.|+|||
T Consensus 90 ~psvlVncAGItrD~~Llrmk-q~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK 168 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMK-QEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASK 168 (256)
T ss_pred CCcEEEEcCccccccceeecc-HHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhc
Confidence 999999999999988888874 59999999999999999999999985 3333 5999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++.+|+++.++|++.+ ||||+|+||++.|||+....... .+..-...|+++..++||+|+.++|+.++.++|||
T Consensus 169 ~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v----~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiT 244 (256)
T KOG1200|consen 169 GGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKV----LDKILGMIPMGRLGEAEEVANLVLFLASDASSYIT 244 (256)
T ss_pred CceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHH----HHHHHccCCccccCCHHHHHHHHHHHhcccccccc
Confidence 99999999999999999 99999999999999998753211 11123345788999999999999999999999987
Q ss_pred cC
Q 039397 266 FP 267 (349)
Q Consensus 266 ~p 267 (349)
..
T Consensus 245 G~ 246 (256)
T KOG1200|consen 245 GT 246 (256)
T ss_pred ce
Confidence 53
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=299.96 Aligned_cols=245 Identities=24% Similarity=0.242 Sum_probs=207.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|++++++|+++|||||+|||+++|++|+++|++|++++|+++++++..+++...+.++..+.+| .+
T Consensus 1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999999988887775555567777888 23
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.+|++|++|||||+...+++.+. +.+++++++++|+.|+++++++++|+|+++ .|+||++||..+..+.|+.+.|++|
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~-~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~as 159 (330)
T PRK06139 81 FGGRIDVWVNNVGVGAVGRFEET-PIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSAS 159 (330)
T ss_pred hcCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHH
Confidence 35899999999999888888776 568999999999999999999999999765 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC--eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 186 KAALVTFYESLRFELNDE--VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|+|+.+|+++|+.|+.++ |+|++|+||+++|++......... ....+.....+||++|+++++++++++..
T Consensus 160 Kaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~-------~~~~~~~~~~~pe~vA~~il~~~~~~~~~ 232 (330)
T PRK06139 160 KFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG-------RRLTPPPPVYDPRRVAKAVVRLADRPRAT 232 (330)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc-------ccccCCCCCCCHHHHHHHHHHHHhCCCCE
Confidence 999999999999999863 999999999999998753211100 00112234679999999999999999988
Q ss_pred EEcCchHHHHHHHHHhchHHHHHHHHHhcc
Q 039397 264 VKFPSWYDVFLLYRVFAPHVLNWTFRLLIS 293 (349)
Q Consensus 264 i~~p~~~~~~~~~~~~~P~~~~~~~~~l~~ 293 (349)
++.+++.....++..++|.+++++..++..
T Consensus 233 ~~~g~~~~~~~~~~~~~P~~~~~~~~~~~~ 262 (330)
T PRK06139 233 TTVGAAARLARLAHFLAPGLTARLMGRLTR 262 (330)
T ss_pred EEcChHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 888888888999999999887776655544
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-39 Score=295.64 Aligned_cols=237 Identities=24% Similarity=0.313 Sum_probs=195.9
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+.+++||+++||||++|||+++|++|+++|++|++++|++++++++..++.. ...+..+.+| .+.
T Consensus 4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4478999999999999999999999999999999999999988887776643 3345566677 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+|++|++|||||+....++.+. +.++|++++++|+.|+++++++++|+|.+++|+||++||.++..+.++...|++||+
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~-~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 161 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQV-DPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKA 161 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHH
Confidence 5899999999999877777776 568999999999999999999999999777799999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHH-HHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKE-EREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++++|+++++.|++++ |+|++++||+++|++........+. ...... ...+..+..+|||+|+.++++++++..+++
T Consensus 162 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~ 240 (296)
T PRK05872 162 GVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPA-FRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVY 240 (296)
T ss_pred HHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchh-HHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999988 9999999999999987653221110 111111 112345778999999999999999999999
Q ss_pred cCchHHHHHHHHHhch
Q 039397 266 FPSWYDVFLLYRVFAP 281 (349)
Q Consensus 266 ~p~~~~~~~~~~~~~P 281 (349)
.|+|+..+..+...+|
T Consensus 241 ~~~~~~~~~~~~~~l~ 256 (296)
T PRK05872 241 APRWVRLMQWLRPVLV 256 (296)
T ss_pred chHHHHHHHHhchHHH
Confidence 9988876654433333
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=293.12 Aligned_cols=224 Identities=17% Similarity=0.194 Sum_probs=184.4
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEec-------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLN-------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d-------------~~~ 107 (349)
+.+|+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++..+.+| ..+
T Consensus 3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 3468999999999999999999999999999999999999888877766632 23457778888 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|++|||||.....++.+. +.++|++++++|+.+++.++++++|+|++++ |+||++||.++..+.++...|+++|
T Consensus 83 ~g~iD~lv~nag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asK 161 (263)
T PRK08339 83 IGEPDIFFFSTGGPKPGYFMEM-SMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVR 161 (263)
T ss_pred hCCCcEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHH
Confidence 6899999999998777777775 5699999999999999999999999997654 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc-------ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML-------EDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+|+++|+++++.|++++ |+||+|+||+++|++....... .............+.++..+|||+|++++++++
T Consensus 162 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s 241 (263)
T PRK08339 162 ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLAS 241 (263)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhc
Confidence 99999999999999998 9999999999999986432110 000011111222356788999999999999999
Q ss_pred cCCceEEc
Q 039397 259 RGDTYVKF 266 (349)
Q Consensus 259 ~~~~~i~~ 266 (349)
+...+++.
T Consensus 242 ~~~~~itG 249 (263)
T PRK08339 242 DLGSYING 249 (263)
T ss_pred chhcCccC
Confidence 88777653
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=286.97 Aligned_cols=219 Identities=16% Similarity=0.152 Sum_probs=177.9
Q ss_pred CCCCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------
Q 039397 41 YSENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------- 104 (349)
|+..|+||+++||||+ +|||+++|++|+++|++|++++|++ +.++..+++.. ..+..+++|
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~ 77 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD--EEDLLVECDVASDESIERAFATI 77 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc--CceeEEeCCCCCHHHHHHHHHHH
Confidence 5567899999999999 8999999999999999999999984 44433333322 356778888
Q ss_pred cccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCch
Q 039397 105 NKESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~ 180 (349)
.+++|++|+||||||+... +++.+. +.++|++++++|+.++++++++++|+|++ +|+||++||.++..+.++..
T Consensus 78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~-~~~~~~~~~~in~~~~~~l~~~~~~~~~~-~g~Iv~iss~~~~~~~~~~~ 155 (252)
T PRK06079 78 KERVGKIDGIVHAIAYAKKEELGGNVTDT-SRDGYALAQDISAYSLIAVAKYARPLLNP-GASIVTLTYFGSERAIPNYN 155 (252)
T ss_pred HHHhCCCCEEEEcccccccccccCCcccC-CHHHHHHHhCcccHHHHHHHHHHHHhccc-CceEEEEeccCccccCCcch
Confidence 3456899999999998653 455565 46899999999999999999999999964 58999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+++|+++++.|++++ |+||+|+||+++|++...... .++ ..+......+..+..+|||+|+++.+++++
T Consensus 156 ~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~-~~~-~~~~~~~~~p~~r~~~pedva~~~~~l~s~ 233 (252)
T PRK06079 156 VMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG-HKD-LLKESDSRTVDGVGVTIEEVGNTAAFLLSD 233 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC-hHH-HHHHHHhcCcccCCCCHHHHHHHHHHHhCc
Confidence 99999999999999999999998 999999999999998654311 111 111112234567889999999999999998
Q ss_pred CCceEEc
Q 039397 260 GDTYVKF 266 (349)
Q Consensus 260 ~~~~i~~ 266 (349)
..++++.
T Consensus 234 ~~~~itG 240 (252)
T PRK06079 234 LSTGVTG 240 (252)
T ss_pred ccccccc
Confidence 8777653
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=289.88 Aligned_cols=218 Identities=14% Similarity=0.078 Sum_probs=172.6
Q ss_pred CCCCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
..|+||++|||||++ |||+++|++|+++|++|++++|+++..+...+.....+ ....+++| .+
T Consensus 3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHH
Confidence 357899999999997 99999999999999999999998643332222111112 22457777 35
Q ss_pred cCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhh
Q 039397 107 ESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y 182 (349)
++|++|+||||||+... .++.+. +.++|++++++|+.++++++|+++|+|++ +|+||++||.++..+.|++.+|
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~-~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~G~Iv~isS~~~~~~~~~~~~Y 159 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADT-TRENFSRTMVISCFSFTEIAKRAAKLMPD-GGSMLTLTYGGSTRVMPNYNVM 159 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhc-CHHHHHHHHhhhhhhHHHHHHHHHHhhcc-CceEEEEcCCCccccCCccchh
Confidence 57999999999998643 345555 56899999999999999999999999974 5899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++||+|+.+|+++|+.|++++ |+||+|+||+++|++...... ......+.....+.++..+|||+|+++++++++..
T Consensus 160 ~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~--~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~ 237 (271)
T PRK06505 160 GVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD--ARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLS 237 (271)
T ss_pred hhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc--hHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccc
Confidence 999999999999999999998 999999999999998643211 10011111223355678899999999999999877
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
.+++
T Consensus 238 ~~it 241 (271)
T PRK06505 238 SGVT 241 (271)
T ss_pred cccC
Confidence 6654
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=289.08 Aligned_cols=215 Identities=18% Similarity=0.181 Sum_probs=172.0
Q ss_pred CCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcc---hhhhHHHHhcCCCCeEEEEEec-------------
Q 039397 43 ENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARREN---RLQGSTIDEYNPINEVTLVSLN------------- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~---~l~~~~~~~~~~~~~~~~~~~d------------- 104 (349)
|.|+||+++||||+ +|||+++|++|+++|++|++++|+++ .+++...++ +.. ..+++|
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~---~~~-~~~~~Dv~d~~~v~~~~~~ 76 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL---GSD-YVYELDVSKPEHFKSLAES 76 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc---CCc-eEEEecCCCHHHHHHHHHH
Confidence 35789999999997 89999999999999999999999853 222222222 222 457778
Q ss_pred -cccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCc
Q 039397 105 -NKESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~ 179 (349)
.+++|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.|+.
T Consensus 77 i~~~~g~iDilVnnAG~~~~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~g~Iv~isS~~~~~~~~~~ 154 (274)
T PRK08415 77 LKKDLGKIDFIVHSVAFAPKEALEGSFLET-SKEAFNIAMEISVYSLIELTRALLPLLND-GASVLTLSYLGGVKYVPHY 154 (274)
T ss_pred HHHHcCCCCEEEECCccCcccccccccccC-CHHHHHHHhhhhhHHHHHHHHHHHHHhcc-CCcEEEEecCCCccCCCcc
Confidence 3457999999999998642 455565 46899999999999999999999999965 5899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
..|++||+|+.+|+++|+.|++++ |+||+|+||+++|++...... ......+.....+..+..+|||+|++++++++
T Consensus 155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s 232 (274)
T PRK08415 155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD--FRMILKWNEINAPLKKNVSIEEVGNSGMYLLS 232 (274)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch--hhHHhhhhhhhCchhccCCHHHHHHHHHHHhh
Confidence 999999999999999999999988 999999999999987543211 00011112223456788999999999999999
Q ss_pred cCCceEE
Q 039397 259 RGDTYVK 265 (349)
Q Consensus 259 ~~~~~i~ 265 (349)
+...+++
T Consensus 233 ~~~~~it 239 (274)
T PRK08415 233 DLSSGVT 239 (274)
T ss_pred hhhhccc
Confidence 8766665
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-38 Score=284.85 Aligned_cols=219 Identities=15% Similarity=0.095 Sum_probs=172.6
Q ss_pred CCCCCEEEEeCC--CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGA--SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGa--s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.|+||+++|||| ++|||+++|++|+++|++|++++|++ +.++..+++.........+++| .++
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH 81 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence 478999999997 67999999999999999999998864 3333333332221234567788 345
Q ss_pred CCCcceeeecCcCCCCc----cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhH
Q 039397 108 SKAVDHLVNTASLGHTF----FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+|++|+||||||+.... ++.+..+.++|++++++|+.++++++++++|+|++++|+||++||.++..+.|+...|+
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~ 161 (261)
T PRK08690 82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMG 161 (261)
T ss_pred hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccch
Confidence 78999999999987542 22222345789999999999999999999999977679999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++|+++++.|++++ |+||+|+||+++|++...... ... .........+..+..+|||+|+++.+++++...
T Consensus 162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~-~~~-~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~ 239 (261)
T PRK08690 162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIAD-FGK-LLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSS 239 (261)
T ss_pred hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCc-hHH-HHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence 99999999999999999999 999999999999998654311 011 111112223567889999999999999998777
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 240 ~~t 242 (261)
T PRK08690 240 GIT 242 (261)
T ss_pred Ccc
Confidence 664
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-37 Score=284.61 Aligned_cols=222 Identities=20% Similarity=0.269 Sum_probs=179.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC--CCeEEEEEeccc------------cCC--
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTLVSLNNK------------ESK-- 109 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d~~------------~~g-- 109 (349)
.||+++|||||+|||+++|++|+++|++|++++|++++++++.+++... ..++..+.+|.. ..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 6899999999999999999999999999999999999998887776332 235566666622 123
Q ss_pred CcceeeecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccccc-C-CCCchhhHH
Q 039397 110 AVDHLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWL-P-LPRMSLYAS 184 (349)
Q Consensus 110 ~iDvlVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~-~-~~~~~~Y~a 184 (349)
.+|++|||||+... ..+.+. +.+++++++++|+.|++.++++++|.|+++ +|+||++||.++.. + .|+.+.|++
T Consensus 132 didilVnnAG~~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~a 210 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEV-DEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAA 210 (320)
T ss_pred CccEEEEecCcCCCCCcccccC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHH
Confidence 46699999998753 345554 568899999999999999999999999654 49999999999975 3 588999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++|+.|++++ |+|++++||+++|++.... .. .....+||++|+.++..+..+.
T Consensus 211 SKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~----~~-----------~~~~~~p~~~A~~~~~~~~~~~-- 273 (320)
T PLN02780 211 TKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR----RS-----------SFLVPSSDGYARAALRWVGYEP-- 273 (320)
T ss_pred HHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc----CC-----------CCCCCCHHHHHHHHHHHhCCCC--
Confidence 9999999999999999988 9999999999999987521 00 0124689999999999997543
Q ss_pred EEcC-chHHHHHHHHHhchHHHH
Q 039397 264 VKFP-SWYDVFLLYRVFAPHVLN 285 (349)
Q Consensus 264 i~~p-~~~~~~~~~~~~~P~~~~ 285 (349)
++.| ++..+...+..++|..+.
T Consensus 274 ~~~p~~~~~~~~~~~~~~P~~~~ 296 (320)
T PLN02780 274 RCTPYWPHSLIWGLISALPESAV 296 (320)
T ss_pred ccCCChHHHHHHHHHHHhHHHHH
Confidence 5566 445566677788897443
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=287.01 Aligned_cols=220 Identities=15% Similarity=0.092 Sum_probs=172.8
Q ss_pred CCCCCCCEEEEeCC--CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC----------CCe---EEEEEec--
Q 039397 42 SENMEDKVVIITGA--SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP----------INE---VTLVSLN-- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGa--s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~----------~~~---~~~~~~d-- 104 (349)
.++|+||++||||| |+|||+++|+.|+++|++|++ +|+.++++++..++... +.. ...+.+|
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 82 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV 82 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence 45699999999999 899999999999999999999 88888887766544210 100 1222222
Q ss_pred --------------------------------cccCCCcceeeecCcCCC--CccccccCCcchHHHHHHhHhhhhHHHH
Q 039397 105 --------------------------------NKESKAVDHLVNTASLGH--TFFFEEVTDTSIFPRLLDINFWGNVYPT 150 (349)
Q Consensus 105 --------------------------------~~~~g~iDvlVnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 150 (349)
.+++|++|+||||||+.. ..++.+. +.++|++++++|+.|++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~-~~e~~~~~~~vN~~~~~~l~ 161 (303)
T PLN02730 83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLET-SRKGYLAAISASSYSFVSLL 161 (303)
T ss_pred cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhC-CHHHHHHHHHHHhHHHHHHH
Confidence 245689999999998643 3566665 56899999999999999999
Q ss_pred HHhccccccCCCeEEEEeccccccCCCCc-hhhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcccCCCCCCcccccc
Q 039397 151 FVALPYLHESNGRVVVNASVENWLPLPRM-SLYASAKAALVTFYESLRFELND-E-VGITIATHGWIGIEMTKGKFMLED 227 (349)
Q Consensus 151 ~~~lp~m~~~~g~IV~isS~~~~~~~~~~-~~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v~T~~~~~~~~~~~ 227 (349)
|+++|+|+++ |+||++||.++..+.|+. ..|++||+|+++|+++|+.|+++ + |+||+|+||+++|++.... ...+
T Consensus 162 ~~~~p~m~~~-G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~-~~~~ 239 (303)
T PLN02730 162 QHFGPIMNPG-GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAI-GFID 239 (303)
T ss_pred HHHHHHHhcC-CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcc-cccH
Confidence 9999999764 999999999999888865 58999999999999999999985 6 9999999999999987642 1111
Q ss_pred chhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 228 GAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
. .........+..+..+|+|+|+++++++++...+++.
T Consensus 240 ~-~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG 277 (303)
T PLN02730 240 D-MIEYSYANAPLQKELTADEVGNAAAFLASPLASAITG 277 (303)
T ss_pred H-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence 1 1111112224467889999999999999987776653
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=281.89 Aligned_cols=224 Identities=20% Similarity=0.197 Sum_probs=185.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------c
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------N 105 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~ 105 (349)
..++++|+++||||++|||++++++|+++|++|++++|+++++++...++.. ...++..+.+| .
T Consensus 2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (260)
T PRK07063 2 MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE 81 (260)
T ss_pred CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 3568899999999999999999999999999999999999888887777643 34567778888 2
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
+.+|++|++|||||........+. +.++|++++++|+.++++++++++|+|++++ |+||++||..+..+.++..+|++
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 160 (260)
T PRK07063 82 EAFGPLDVLVNNAGINVFADPLAM-TDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPV 160 (260)
T ss_pred HHhCCCcEEEECCCcCCCCChhhC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHH
Confidence 346899999999998766666665 4589999999999999999999999997654 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh--hhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE--MQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
||+|+++++++++.|++++ |+||+|+||+++|++............ ........+.++..+|||+|+.+++++++..
T Consensus 161 sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~ 240 (260)
T PRK07063 161 AKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEA 240 (260)
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence 9999999999999999988 999999999999998754322111101 1111223456688899999999999999887
Q ss_pred ceEEc
Q 039397 262 TYVKF 266 (349)
Q Consensus 262 ~~i~~ 266 (349)
.+++.
T Consensus 241 ~~itG 245 (260)
T PRK07063 241 PFINA 245 (260)
T ss_pred cccCC
Confidence 77653
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=281.48 Aligned_cols=224 Identities=24% Similarity=0.269 Sum_probs=182.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC---CCCeEEEEEec--------------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN---PINEVTLVSLN-------------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~---~~~~~~~~~~d-------------- 104 (349)
+..++||+++||||++|||+++|++|+++|++|++++|+++++++...++.. .+..+..+.||
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999888777632 23468888888
Q ss_pred ccc-CCCcceeeecCcCCCCc-cccccCCcchHHHHHHhHhhh-hHHHHHHhccccccC-CCeEEEEeccccccCCCCc-
Q 039397 105 NKE-SKAVDHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWG-NVYPTFVALPYLHES-NGRVVVNASVENWLPLPRM- 179 (349)
Q Consensus 105 ~~~-~g~iDvlVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g-~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~- 179 (349)
.++ +|++|+||||||..... +.++. +.|+|++++++|+.| .+.+.+++.|+++++ +|.|+++||+++..+.+..
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~-s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~ 161 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDL-SEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG 161 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhC-CHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence 234 79999999999998766 57776 679999999999995 667777777777764 5899999999998886666
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhh-hh--HHHHhhhcCCCCHHHHHHHHHH
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEM-QW--KEEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~edvA~~i~~ 255 (349)
.+|+++|+|+++|+|++|.||+++ ||||+|+||++.|++...........+. +. .....+.++...|+|+|+.+.|
T Consensus 162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~f 241 (270)
T KOG0725|consen 162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAF 241 (270)
T ss_pred ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHh
Confidence 799999999999999999999999 9999999999999982211111101111 11 1223468899999999999999
Q ss_pred HHhcCCceEEc
Q 039397 256 GACRGDTYVKF 266 (349)
Q Consensus 256 l~~~~~~~i~~ 266 (349)
+++++..|++.
T Consensus 242 la~~~asyitG 252 (270)
T KOG0725|consen 242 LASDDASYITG 252 (270)
T ss_pred hcCcccccccC
Confidence 99998777753
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=281.21 Aligned_cols=218 Identities=17% Similarity=0.100 Sum_probs=172.2
Q ss_pred CCCCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
..++||+++||||++ |||+++|++|+++|++|++++|++ +.++..+++.........+++| .+
T Consensus 4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHH
Confidence 457899999999998 999999999999999999999874 3333333332111122356777 35
Q ss_pred cCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhh
Q 039397 107 ESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y 182 (349)
++|++|+||||||+... .++.+. +.++|++++++|+.+++.++++++|+|++ +|+||++||.++..+.|+...|
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~-~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-~G~Iv~isS~~~~~~~~~~~~Y 160 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDT-SLENFHNSLHISCYSLLELSRSAEALMHD-GGSIVTLTYYGAEKVIPNYNVM 160 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccC-CHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CceEEEEecCccccCCCcccch
Confidence 67999999999998642 345554 56899999999999999999999999964 6899999999999899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++||+|+++|+++|+.|++++ |+||+|+||+++|++..... ..+. .........+..+..+|||+|+++++++++..
T Consensus 161 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~-~~~~-~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~ 238 (260)
T PRK06603 161 GVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIG-DFST-MLKSHAATAPLKRNTTQEDVGGAAVYLFSELS 238 (260)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCC-CcHH-HHHHHHhcCCcCCCCCHHHHHHHHHHHhCccc
Confidence 999999999999999999988 99999999999999754321 1011 11111223356678899999999999999877
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
.+++
T Consensus 239 ~~it 242 (260)
T PRK06603 239 KGVT 242 (260)
T ss_pred ccCc
Confidence 7765
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=280.70 Aligned_cols=219 Identities=18% Similarity=0.206 Sum_probs=178.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++||+++||||++|||+++|++|+++|++|++++|+.. ++..+.+...+.++..+.+| .+.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 4688999999999999999999999999999999998643 22223333234467778888 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|++|||||+....++.+. +.++|++++++|+.+++.++++++|+|+++ +|+||++||.++..+.++.+.|++||
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK 160 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEF-GNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK 160 (251)
T ss_pred CCCCEEEECCCcCCCCCcccC-CHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence 899999999999877777665 568999999999999999999999999654 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++++.|++++ |+||+|+||+++|++...... .+. .........+..+..+|||+|+++.+++++...+++
T Consensus 161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~-~~~-~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~ 238 (251)
T PRK12481 161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA-DTA-RNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVT 238 (251)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc-ChH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcC
Confidence 99999999999999988 999999999999998764321 111 111112233556788999999999999998877765
Q ss_pred c
Q 039397 266 F 266 (349)
Q Consensus 266 ~ 266 (349)
.
T Consensus 239 G 239 (251)
T PRK12481 239 G 239 (251)
T ss_pred C
Confidence 3
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=287.48 Aligned_cols=245 Identities=24% Similarity=0.235 Sum_probs=206.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
+...+++|+++||||++|||++++++|+++|++|++++|+++++++...++...+.++..+.+| .+
T Consensus 2 ~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 2 MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE 81 (334)
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3457889999999999999999999999999999999999988888777775445567788888 24
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++|++|++|||||.....++.+. +.+++++++++|+.|+++++++++|+|+++ .|+||++||..+..+.+..+.|++|
T Consensus 82 ~~g~iD~lInnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as 160 (334)
T PRK07109 82 ELGPIDTWVNNAMVTVFGPFEDV-TPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAA 160 (334)
T ss_pred HCCCCCEEEECCCcCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHH
Confidence 56899999999998877777776 568999999999999999999999999765 4999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC--C-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 186 KAALVTFYESLRFELND--E-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 186 Kaal~~l~~~la~el~~--~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
|+++++|+++++.|+.. . |+|++|+||.++|++....... ......+..+..+|||+|++++++++++.+
T Consensus 161 K~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~-------~~~~~~~~~~~~~pe~vA~~i~~~~~~~~~ 233 (334)
T PRK07109 161 KHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR-------LPVEPQPVPPIYQPEVVADAILYAAEHPRR 233 (334)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh-------ccccccCCCCCCCHHHHHHHHHHHHhCCCc
Confidence 99999999999999964 2 9999999999999976432100 001112234577999999999999999988
Q ss_pred eEEcCchHHHHHHHHHhchHHHHHHHHHhcc
Q 039397 263 YVKFPSWYDVFLLYRVFAPHVLNWTFRLLIS 293 (349)
Q Consensus 263 ~i~~p~~~~~~~~~~~~~P~~~~~~~~~l~~ 293 (349)
.+.+++.........++.|.++++...++..
T Consensus 234 ~~~vg~~~~~~~~~~~~~P~~~~~~~~~~~~ 264 (334)
T PRK07109 234 ELWVGGPAKAAILGNRLAPGLLDRYLARTGY 264 (334)
T ss_pred EEEeCcHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 8888888888888999999988877665433
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=281.74 Aligned_cols=220 Identities=20% Similarity=0.260 Sum_probs=180.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|+++||||++|||+++|++|+++|++|++++|+ +++++...++.....++..+.+| .+.+|
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999999 77777666664444567788888 34568
Q ss_pred CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+... .++.+. +.+.|++++++|+.|++.++++++|+|++++|+||++||.++..+.++.+.|++||+|
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 160 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEY-PVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGA 160 (272)
T ss_pred CcCEEEECCCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHHH
Confidence 99999999998643 455554 5688999999999999999999999998777999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh-hhhH---HHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE-MQWK---EEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+++|+++++.|++++ |+||+|+||+++|++.+......+... .... ....+.++..+|||+|+.+++++++...+
T Consensus 161 l~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~ 240 (272)
T PRK08589 161 VINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF 240 (272)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence 999999999999988 999999999999998765322111100 0011 11234567789999999999999886655
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 241 ~~ 242 (272)
T PRK08589 241 IT 242 (272)
T ss_pred cC
Confidence 54
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=280.33 Aligned_cols=219 Identities=17% Similarity=0.137 Sum_probs=174.5
Q ss_pred CCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcc--hhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 44 NMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARREN--RLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 44 ~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~--~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
+++||+++||||+ +|||+++|++|+++|++|++++|+.+ +.++..+++.........+.+| .
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK 82 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence 5789999999986 89999999999999999999977543 2333333442222345667787 3
Q ss_pred ccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchh
Q 039397 106 KESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~ 181 (349)
+++|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||..+..+.|+...
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~-~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-~g~Iv~isS~~~~~~~~~~~~ 160 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSAT-SREGFARALEISAYSLAPLCKAAKPLMSE-GGSIVTLTYLGGVRAIPNYNV 160 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhh-CHHHHHHHheeeeHHHHHHHHHHHHHHhh-CCeEEEEeccccccCCcccch
Confidence 557899999999998642 456565 46899999999999999999999999965 589999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++||+|+++|+++|+.|++++ |+||+|+||+++|++..... ..++ .........+..+..+|||+|+++.+++++.
T Consensus 161 Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~-~~~~-~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~ 238 (258)
T PRK07370 161 MGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVG-GILD-MIHHVEEKAPLRRTVTQTEVGNTAAFLLSDL 238 (258)
T ss_pred hhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccc-cchh-hhhhhhhcCCcCcCCCHHHHHHHHHHHhChh
Confidence 9999999999999999999998 99999999999999864321 1011 1111122335668889999999999999987
Q ss_pred CceEEc
Q 039397 261 DTYVKF 266 (349)
Q Consensus 261 ~~~i~~ 266 (349)
..+++.
T Consensus 239 ~~~~tG 244 (258)
T PRK07370 239 ASGITG 244 (258)
T ss_pred hccccC
Confidence 777653
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=278.77 Aligned_cols=220 Identities=16% Similarity=0.079 Sum_probs=176.0
Q ss_pred CCCCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCc---chhhhHHHHhcCCCCeEEEEEec-----------
Q 039397 41 YSENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRE---NRLQGSTIDEYNPINEVTLVSLN----------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~---~~l~~~~~~~~~~~~~~~~~~~d----------- 104 (349)
|+.+++||+++||||+ +|||+++|++|+++|++|++++|+. ++++++..++. +.++..+.+|
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~ 78 (257)
T PRK08594 1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACF 78 (257)
T ss_pred CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHH
Confidence 3457899999999997 8999999999999999999998764 33444444432 3456777888
Q ss_pred ---cccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC
Q 039397 105 ---NKESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP 177 (349)
Q Consensus 105 ---~~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~ 177 (349)
.+++|++|++|||||+... .++.+. +.++|++++++|+.++++++++++|+|.+ +|+||++||.++..+.+
T Consensus 79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~ 156 (257)
T PRK08594 79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLET-SRDGFLLAQNISAYSLTAVAREAKKLMTE-GGSIVTLTYLGGERVVQ 156 (257)
T ss_pred HHHHHhCCCccEEEECcccCCCCcCCCccccC-CHHHHHHHHhhhHHHHHHHHHHHHHhccc-CceEEEEcccCCccCCC
Confidence 3457999999999998642 345554 56889999999999999999999999965 68999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 178 RMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 178 ~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
+..+|++||+|+++|+++++.|++++ |+||+|+||+++|++.+.... .+. .........+..+..+|||+|+.++++
T Consensus 157 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~-~~~~~~~~~p~~r~~~p~~va~~~~~l 234 (257)
T PRK08594 157 NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FNS-ILKEIEERAPLRRTTTQEEVGDTAAFL 234 (257)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-ccH-HHHHHhhcCCccccCCHHHHHHHHHHH
Confidence 99999999999999999999999988 999999999999997543211 011 111111223456788999999999999
Q ss_pred HhcCCceEEc
Q 039397 257 ACRGDTYVKF 266 (349)
Q Consensus 257 ~~~~~~~i~~ 266 (349)
+++..++++.
T Consensus 235 ~s~~~~~~tG 244 (257)
T PRK08594 235 FSDLSRGVTG 244 (257)
T ss_pred cCcccccccc
Confidence 9988777653
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=277.93 Aligned_cols=216 Identities=14% Similarity=0.108 Sum_probs=172.7
Q ss_pred CCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchh---hhHHHHhcCCCCeEEEEEec-------------
Q 039397 43 ENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRL---QGSTIDEYNPINEVTLVSLN------------- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l---~~~~~~~~~~~~~~~~~~~d------------- 104 (349)
++++||+++||||+ +|||+++|++|+++|++|++++|+++.. +++..++ .....+.+|
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~ 81 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL----DAPIFLPLDVREPGQLEAVFAR 81 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh----ccceEEecCcCCHHHHHHHHHH
Confidence 46789999999998 5999999999999999999999986432 2222222 224567777
Q ss_pred -cccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCc
Q 039397 105 -NKESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~ 179 (349)
.+++|++|++|||||+... .++.+. +.++|++++++|+.|+++++++++|+|+ ++|+||++||.++..+.++.
T Consensus 82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~-~~~~~~~~~~vN~~~~~~~~~~~~p~m~-~~g~Ii~iss~~~~~~~~~~ 159 (258)
T PRK07533 82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDC-SREGFALAMDVSCHSFIRMARLAEPLMT-NGGSLLTMSYYGAEKVVENY 159 (258)
T ss_pred HHHHcCCCCEEEEcCccCCcccccCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHhc-cCCEEEEEeccccccCCccc
Confidence 3456899999999998643 345554 5689999999999999999999999996 46899999999999889999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+.|++||+|+++|+++|+.|++++ |+||+|+||+++|++.+..... +. .........+..+..+|||+|+.++++++
T Consensus 160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~-~~-~~~~~~~~~p~~r~~~p~dva~~~~~L~s 237 (258)
T PRK07533 160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDF-DA-LLEDAAERAPLRRLVDIDDVGAVAAFLAS 237 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCc-HH-HHHHHHhcCCcCCCCCHHHHHHHHHHHhC
Confidence 999999999999999999999988 9999999999999986542110 11 11111123355678899999999999999
Q ss_pred cCCceEEc
Q 039397 259 RGDTYVKF 266 (349)
Q Consensus 259 ~~~~~i~~ 266 (349)
+...+++.
T Consensus 238 ~~~~~itG 245 (258)
T PRK07533 238 DAARRLTG 245 (258)
T ss_pred hhhccccC
Confidence 87666653
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=277.03 Aligned_cols=216 Identities=15% Similarity=0.109 Sum_probs=170.8
Q ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 45 MEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 45 l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
|+||+++||||++ |||+++|++|+++|++|++++|+ +++++..+++.........+.+| .+.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 7899999999986 99999999999999999999997 34444444443222345567788 3567
Q ss_pred CCcceeeecCcCCCCcc-----ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhH
Q 039397 109 KAVDHLVNTASLGHTFF-----FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~-----~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
|++|++|||||+..... +.+. +.++|++++++|+.|++.+++++.|+|+ ++|+||++||.++..+.++..+|+
T Consensus 83 g~iD~linnAg~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~g~Iv~iss~~~~~~~~~~~~Y~ 160 (262)
T PRK07984 83 PKFDGFVHSIGFAPGDQLDGDYVNAV-TREGFKIAHDISSYSFVAMAKACRSMLN-PGSALLTLSYLGAERAIPNYNVMG 160 (262)
T ss_pred CCCCEEEECCccCCccccCCcchhhc-CHHHHHHHhhhhhHHHHHHHHHHHHHhc-CCcEEEEEecCCCCCCCCCcchhH
Confidence 89999999999864322 3333 4588999999999999999999998764 468999999999998999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++|+++++.|++++ |+||+|+||+++|++...... ............+..+..+|||+|+++++++++...
T Consensus 161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~ 238 (262)
T PRK07984 161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD--FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA 238 (262)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc--hHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccc
Confidence 99999999999999999998 999999999999987542211 000011112233556888999999999999998777
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 239 ~it 241 (262)
T PRK07984 239 GIS 241 (262)
T ss_pred ccc
Confidence 665
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=274.52 Aligned_cols=220 Identities=20% Similarity=0.196 Sum_probs=181.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+++++|+++||||++|||++++++|+++|++|++++|+++++++...++...+.++..+.+| .+++
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999988888777765444567778888 2446
Q ss_pred CCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccc-cCCCCchhhHHH
Q 039397 109 KAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENW-LPLPRMSLYASA 185 (349)
Q Consensus 109 g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~-~~~~~~~~Y~as 185 (349)
+++|++|||||+... .++.+. +.++|++++++|+.++++++++++|.|+++ .|+||++||.++. .+.++...|++|
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s 160 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEM-SLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAAS 160 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHH
Confidence 899999999998643 455554 568899999999999999999999999765 4899999999887 578899999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++++++++.|++++ |+||+|+||+++|++.+..... .. ...+.....+..+..+|+|+|+.+++++++...++
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~ 238 (254)
T PRK07478 161 KAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT-PE-ALAFVAGLHALKRMAQPEEIAQAALFLASDAASFV 238 (254)
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC-HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCC
Confidence 999999999999999988 9999999999999987543211 11 11122222345678899999999999998876665
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 239 ~ 239 (254)
T PRK07478 239 T 239 (254)
T ss_pred C
Confidence 4
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=275.81 Aligned_cols=215 Identities=16% Similarity=0.099 Sum_probs=168.4
Q ss_pred CCCCCEEEEeCC--CchHHHHHHHHHHHcCCeEEEEecC---cchhhhHHHHhcCCCCeEEEEEec--------------
Q 039397 44 NMEDKVVIITGA--SSDIGEQIAYEYAKRKANLVLVARR---ENRLQGSTIDEYNPINEVTLVSLN-------------- 104 (349)
Q Consensus 44 ~l~~k~vlVTGa--s~GIG~ala~~la~~G~~Vv~~~r~---~~~l~~~~~~~~~~~~~~~~~~~d-------------- 104 (349)
.+++|+++|||| ++|||+++|++|+++|++|++++|. .++++++..+. + ....+.+|
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~Dv~d~~~v~~~~~~~ 78 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF---G-SDLVFPCDVASDEQIDALFASL 78 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc---C-CcceeeccCCCHHHHHHHHHHH
Confidence 478999999996 6899999999999999999998764 33333332222 1 22356677
Q ss_pred cccCCCcceeeecCcCCCCc----cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCch
Q 039397 105 NKESKAVDHLVNTASLGHTF----FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~ 180 (349)
.+++|++|++|||||+.... ++.+..+.++|++++++|+.|+++++++++|+|. ++|+||++||.++..+.++..
T Consensus 79 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~-~~g~Ii~iss~~~~~~~~~~~ 157 (260)
T PRK06997 79 GQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS-DDASLLTLSYLGAERVVPNYN 157 (260)
T ss_pred HHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeccccccCCCCcc
Confidence 34578999999999986432 2222234588999999999999999999999995 458999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+++|+++|+.|++++ |+||+|+||+++|++...... ... .........+.++..+|||+|+++.+++++
T Consensus 158 ~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~-~~~~~~~~~p~~r~~~pedva~~~~~l~s~ 235 (260)
T PRK06997 158 TMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD-FGK-ILDFVESNAPLRRNVTIEEVGNVAAFLLSD 235 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc-hhh-HHHHHHhcCcccccCCHHHHHHHHHHHhCc
Confidence 99999999999999999999998 999999999999987643211 011 111112223566788999999999999998
Q ss_pred CCceEE
Q 039397 260 GDTYVK 265 (349)
Q Consensus 260 ~~~~i~ 265 (349)
...+++
T Consensus 236 ~~~~it 241 (260)
T PRK06997 236 LASGVT 241 (260)
T ss_pred cccCcc
Confidence 877765
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=277.69 Aligned_cols=214 Identities=15% Similarity=0.123 Sum_probs=170.5
Q ss_pred CCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcc---hhhhHHHHhcCCCCeEEEEEec--------------
Q 039397 44 NMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARREN---RLQGSTIDEYNPINEVTLVSLN-------------- 104 (349)
Q Consensus 44 ~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~---~l~~~~~~~~~~~~~~~~~~~d-------------- 104 (349)
.|++|+++||||+ +|||+++|++|+++|++|++++|++. ++++...++ .....+++|
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~~~v~~~~~~~ 82 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL----GAFVAGHCDVTDEASIDAVFETL 82 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc----CCceEEecCCCCHHHHHHHHHHH
Confidence 4678999999997 89999999999999999999998742 222222222 224457788
Q ss_pred cccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCch
Q 039397 105 NKESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~ 180 (349)
.+++|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.|+..
T Consensus 83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~g~Iv~iss~~~~~~~p~~~ 160 (272)
T PRK08159 83 EKKWGKLDFVVHAIGFSDKDELTGRYVDT-SRDNFTMTMDISVYSFTAVAQRAEKLMTD-GGSILTLTYYGAEKVMPHYN 160 (272)
T ss_pred HHhcCCCcEEEECCcccCccccccCcccC-CHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CceEEEEeccccccCCCcch
Confidence 3567899999999998643 445554 46899999999999999999999999964 58999999999998999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+.+|+++|+.|++++ |+||+|+||+++|++...... ......+.....+.++..+|||+|+.+++++++
T Consensus 161 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~ 238 (272)
T PRK08159 161 VMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD--FRYILKWNEYNAPLRRTVTIEEVGDSALYLLSD 238 (272)
T ss_pred hhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc--chHHHHHHHhCCcccccCCHHHHHHHHHHHhCc
Confidence 99999999999999999999998 999999999999987643211 010111212234556788999999999999998
Q ss_pred CCceEE
Q 039397 260 GDTYVK 265 (349)
Q Consensus 260 ~~~~i~ 265 (349)
...+++
T Consensus 239 ~~~~it 244 (272)
T PRK08159 239 LSRGVT 244 (272)
T ss_pred cccCcc
Confidence 776654
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=275.65 Aligned_cols=224 Identities=21% Similarity=0.272 Sum_probs=184.2
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC--CCeEEEEEec--------------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTLVSLN-------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d-------------- 104 (349)
|+.+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++... +.++..+.+|
T Consensus 2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (265)
T PRK07062 2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV 81 (265)
T ss_pred CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999998888776666322 3466777887
Q ss_pred cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhH
Q 039397 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
.+.+|++|++|||||.....++.+. +.++|++.+++|+.++++++++++|.|+++ .|+||++||..+..+.++...|+
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~ 160 (265)
T PRK07062 82 EARFGGVDMLVNNAGQGRVSTFADT-TDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATS 160 (265)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhH
Confidence 2356899999999999777777775 458899999999999999999999999765 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc---cchhhhhHH-----HHhhhcCCCCHHHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE---DGAEMQWKE-----EREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~edvA~~i~ 254 (349)
++|+|+.+++++++.|++++ |+||+|+||+++|++....+... ......+.. ...+.++..+|||+|++++
T Consensus 161 asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~ 240 (265)
T PRK07062 161 AARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALF 240 (265)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999988 99999999999999865432110 000111111 1234567889999999999
Q ss_pred HHHhcCCceEE
Q 039397 255 SGACRGDTYVK 265 (349)
Q Consensus 255 ~l~~~~~~~i~ 265 (349)
+++++...+++
T Consensus 241 ~L~s~~~~~~t 251 (265)
T PRK07062 241 FLASPLSSYTT 251 (265)
T ss_pred HHhCchhcccc
Confidence 99988766654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=275.48 Aligned_cols=217 Identities=22% Similarity=0.285 Sum_probs=180.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+++||+++||||++|||++++++|+++|++|++++|+.+++++...++...+.++..+.+| .+.+|
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999999999999999988888777765444567777888 23468
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCC-C-CchhhHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPL-P-RMSLYASA 185 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~-~-~~~~Y~as 185 (349)
++|+||||||.....++.+. +.++|++++++|+.+++.++++++|+|.++ +|+||++||.++..+. + ....|++|
T Consensus 86 ~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~as 164 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDM-PLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCAS 164 (253)
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHH
Confidence 99999999999877777765 568999999999999999999999999654 3799999999886543 3 45789999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++++++++.|++++ |+||+|+||+++|++..... .....+ ....+.++..+|||+|+++++++++...++
T Consensus 165 Kaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~----~~~~~~-~~~~~~~r~~~p~~va~~~~~L~s~~~~~~ 239 (253)
T PRK05867 165 KAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT----EYQPLW-EPKIPLGRLGRPEELAGLYLYLASEASSYM 239 (253)
T ss_pred HHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch----HHHHHH-HhcCCCCCCcCHHHHHHHHHHHcCcccCCc
Confidence 999999999999999988 99999999999999875421 101111 223356788999999999999999887776
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
+.
T Consensus 240 tG 241 (253)
T PRK05867 240 TG 241 (253)
T ss_pred CC
Confidence 53
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=271.32 Aligned_cols=226 Identities=24% Similarity=0.300 Sum_probs=193.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++|++|+++|||||||||++++++|+++|++|++++|+++++++...++. .+..+.+| .+.+
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc
Confidence 35788999999999999999999999999999999999888777665542 35566777 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||+.....+.+. +.+++++++++|+.|++.+++.++|.|++++ |+||++||.++..+.++...|++||+
T Consensus 77 ~~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 155 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDE-PDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKH 155 (273)
T ss_pred CCCCEEEECCCcCCCCccccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHH
Confidence 889999999999887777775 5688999999999999999999999997654 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
++++|+++++.|+.+. |++++|+||+++|++...... .......+|+|+|+.+++++.+++..+..
T Consensus 156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-------------~~~~~~~~~~~va~~~~~~l~~~~~~~~~ 222 (273)
T PRK07825 156 AVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-------------AKGFKNVEPEDVAAAIVGTVAKPRPEVRV 222 (273)
T ss_pred HHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-------------ccCCCCCCHHHHHHHHHHHHhCCCCEEec
Confidence 9999999999999888 999999999999998754311 01124689999999999999999999988
Q ss_pred CchHHHHHHHHHhchHHHHH
Q 039397 267 PSWYDVFLLYRVFAPHVLNW 286 (349)
Q Consensus 267 p~~~~~~~~~~~~~P~~~~~ 286 (349)
|++......+..++|..+..
T Consensus 223 ~~~~~~~~~~~~~~p~~~~~ 242 (273)
T PRK07825 223 PRALGPLAQAQRLLPRRVRE 242 (273)
T ss_pred cHHHHHHHHHHHhCcHHHHH
Confidence 88888888888888964433
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=281.44 Aligned_cols=224 Identities=19% Similarity=0.157 Sum_probs=171.8
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc----------chhhhHHHHhcCCCCeEEEEEec------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE----------NRLQGSTIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~----------~~l~~~~~~~~~~~~~~~~~~~d------ 104 (349)
|+.+|+||+++||||++|||+++|++|+++|++|++++|+. ++++++.+.+...+..+..+.+|
T Consensus 2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~ 81 (305)
T PRK08303 2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ 81 (305)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 34578999999999999999999999999999999999984 34444555554334456778888
Q ss_pred --------cccCCCcceeeecC-cCCC----CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecc
Q 039397 105 --------NKESKAVDHLVNTA-SLGH----TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASV 170 (349)
Q Consensus 105 --------~~~~g~iDvlVnnA-g~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~ 170 (349)
.+.+|++|+||||| |... ..++.+. +.++|++++++|+.+++.++++++|+|+++ +|+||++||.
T Consensus 82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~ 160 (305)
T PRK08303 82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEH-SLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG 160 (305)
T ss_pred HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhc-CHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence 35578999999999 7532 2445554 458899999999999999999999999765 5899999997
Q ss_pred cccc---CCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhh-hcCCCC
Q 039397 171 ENWL---PLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREV-HVAGGP 245 (349)
Q Consensus 171 ~~~~---~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 245 (349)
.+.. +.++...|++||+|+.+|+++|+.|++++ |+||+|+||+++|++........+........ ..+ ..+..+
T Consensus 161 ~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~ 239 (305)
T PRK08303 161 TAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA-KEPHFAISET 239 (305)
T ss_pred cccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc-cccccccCCC
Confidence 7643 33457889999999999999999999998 99999999999999854321101100001011 122 345678
Q ss_pred HHHHHHHHHHHHhcCC-ceEEc
Q 039397 246 VEDFARLIVSGACRGD-TYVKF 266 (349)
Q Consensus 246 ~edvA~~i~~l~~~~~-~~i~~ 266 (349)
|||+|+++++++++.. .+++.
T Consensus 240 peevA~~v~fL~s~~~~~~itG 261 (305)
T PRK08303 240 PRYVGRAVAALAADPDVARWNG 261 (305)
T ss_pred HHHHHHHHHHHHcCcchhhcCC
Confidence 9999999999999874 46653
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=273.27 Aligned_cols=218 Identities=17% Similarity=0.121 Sum_probs=169.9
Q ss_pred CCCCCCCCEEEEeCC--CchHHHHHHHHHHHcCCeEEEEecCc--chhhhHHHHhcCCCCeEEEEEec------------
Q 039397 41 YSENMEDKVVIITGA--SSDIGEQIAYEYAKRKANLVLVARRE--NRLQGSTIDEYNPINEVTLVSLN------------ 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGa--s~GIG~ala~~la~~G~~Vv~~~r~~--~~l~~~~~~~~~~~~~~~~~~~d------------ 104 (349)
|+.++++|+++|||| ++|||+++|++|+++|++|++++|+. +.+++...++. ..+..+.+|
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~i~~~~~ 77 (256)
T PRK07889 1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP---EPAPVLELDVTNEEHLASLAD 77 (256)
T ss_pred CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC---CCCcEEeCCCCCHHHHHHHHH
Confidence 446789999999999 89999999999999999999999864 33444444432 245567777
Q ss_pred --cccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCC
Q 039397 105 --NKESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPR 178 (349)
Q Consensus 105 --~~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~ 178 (349)
.+++|++|++|||||+... .++.+. +.++|++++++|+.|++.++++++|+|++ +|+||+++|.. ..+.|.
T Consensus 78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-~g~Iv~is~~~-~~~~~~ 154 (256)
T PRK07889 78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDA-PWEDVATALHVSAYSLKSLAKALLPLMNE-GGSIVGLDFDA-TVAWPA 154 (256)
T ss_pred HHHHHcCCCcEEEEccccccccccCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHhccc-CceEEEEeecc-cccCCc
Confidence 3456899999999998643 234454 56889999999999999999999999974 58999998753 456778
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhc-CCCCHHHHHHHHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHV-AGGPVEDFARLIVSG 256 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~edvA~~i~~l 256 (349)
+..|++||+|+++|+++|+.|++++ |+||+|+||+++|++.+.... .+.....+ ....+.+ +..+|||+|+.++++
T Consensus 155 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~-~~~~p~~~~~~~p~evA~~v~~l 232 (256)
T PRK07889 155 YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG-FELLEEGW-DERAPLGWDVKDPTPVARAVVAL 232 (256)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC-cHHHHHHH-HhcCccccccCCHHHHHHHHHHH
Confidence 8899999999999999999999988 999999999999998654211 11101111 1122333 578999999999999
Q ss_pred HhcCCceEEc
Q 039397 257 ACRGDTYVKF 266 (349)
Q Consensus 257 ~~~~~~~i~~ 266 (349)
+++...+++.
T Consensus 233 ~s~~~~~~tG 242 (256)
T PRK07889 233 LSDWFPATTG 242 (256)
T ss_pred hCcccccccc
Confidence 9987666543
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=267.30 Aligned_cols=221 Identities=22% Similarity=0.225 Sum_probs=185.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCC-CeEEEEEec--------------cccCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI-NEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~-~~~~~~~~d--------------~~~~g~iD 112 (349)
|+++||||++|||+++|++|+ +|++|++++|++++++++.+++...+ ..+..+.+| .+.+|++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999 59999999999999988887774333 346677888 34568999
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
++|||||+.......+. +.+++.+++++|+.+++++++.++|.|.++ +|+||++||.++..+.++...|++||+|++
T Consensus 80 ~lv~nag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 158 (246)
T PRK05599 80 LAVVAFGILGDQERAET-DEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD 158 (246)
T ss_pred EEEEecCcCCCchhhhc-CcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence 99999998755544443 446778899999999999999999999654 489999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC--ceEEcC
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD--TYVKFP 267 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~--~~i~~p 267 (349)
+|+++++.|++++ |+||+++||+++|++...... .....+|||+|+.+++++++++ ..+..|
T Consensus 159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~---------------~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~ 223 (246)
T PRK05599 159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP---------------APMSVYPRDVAAAVVSAITSSKRSTTLWIP 223 (246)
T ss_pred HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC---------------CCCCCCHHHHHHHHHHHHhcCCCCceEEeC
Confidence 9999999999888 999999999999998653210 0123689999999999999875 456778
Q ss_pred chHHHHHHHHHhchHHHH
Q 039397 268 SWYDVFLLYRVFAPHVLN 285 (349)
Q Consensus 268 ~~~~~~~~~~~~~P~~~~ 285 (349)
.....+..+.+++|+.+.
T Consensus 224 ~~~~~~~~~~~~~p~~~~ 241 (246)
T PRK05599 224 GRLRVLAWIMRLVPRPIW 241 (246)
T ss_pred ccHHHHHHHHHhCcHHHH
Confidence 778888899999996543
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=298.15 Aligned_cols=248 Identities=24% Similarity=0.297 Sum_probs=207.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
...+++++++||||+||||+++|++|+++|++|++++|+.++++++.+++...+.++..+.+| .+.
T Consensus 310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 456788999999999999999999999999999999999988888777775445567888888 245
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccCCCCchhhHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
+|++|++|||||+...+.+.+. +.+++++++++|+.|+++++++++|+|++++ |+||++||.+++.+.++...|++|
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 468 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDT-SAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATS 468 (582)
T ss_pred cCCCcEEEECCccCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHH
Confidence 6889999999999887777776 4689999999999999999999999997653 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh--hh--hHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE--MQ--WKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|+|+++++++++.|++++ |+|++|+||+++|++...........+ .. ............+||++|++++++++++
T Consensus 469 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~ 548 (582)
T PRK05855 469 KAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN 548 (582)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence 999999999999999988 999999999999998775421111100 00 0011112234568999999999999999
Q ss_pred CceEEcCchHHHHHHHHHhchHHHHHHHHH
Q 039397 261 DTYVKFPSWYDVFLLYRVFAPHVLNWTFRL 290 (349)
Q Consensus 261 ~~~i~~p~~~~~~~~~~~~~P~~~~~~~~~ 290 (349)
+..+.+++.......+.+++|.++.++.++
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 578 (582)
T PRK05855 549 KAVVPVTPEAHAGYGVSRFAPWLLRSLARL 578 (582)
T ss_pred CCEEEeCHHHHHHHHHHHHChHHHHHHHHh
Confidence 999999988888889999999888876544
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=271.31 Aligned_cols=237 Identities=22% Similarity=0.206 Sum_probs=195.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.+++++|+++||||+||||+++|++|+++|++|++++|+.+++++..+++...+..+..+.+| .+.
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999999988887776664334456777888 234
Q ss_pred CCCcceeeecCcCCCCcccccc-CCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEecccccc-CCCCchhhHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEV-TDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWL-PLPRMSLYAS 184 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~-~~~~~~~Y~a 184 (349)
+|++|++|||||+....++.+. .+.+++++++++|+.|++.++++++|.|++++ |+||++||.++.. +.|+...|++
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~a 194 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNA 194 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHH
Confidence 6799999999999876665542 13467889999999999999999999997654 8999999987665 4678889999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++++.|++++ |+|++++||+++|++....... ......+||++|+.++.++.++...
T Consensus 195 sKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~-------------~~~~~~~pe~vA~~~~~~~~~~~~~ 261 (293)
T PRK05866 195 SKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY-------------DGLPALTADEAAEWMVTAARTRPVR 261 (293)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc-------------cCCCCCCHHHHHHHHHHHHhcCCeE
Confidence 9999999999999999988 9999999999999987532100 0113579999999999999987655
Q ss_pred EEcCchHHHHHHHHHhchHHHHHHHHHhc
Q 039397 264 VKFPSWYDVFLLYRVFAPHVLNWTFRLLI 292 (349)
Q Consensus 264 i~~p~~~~~~~~~~~~~P~~~~~~~~~l~ 292 (349)
+ .|.+.....++.+++|.+..+...+..
T Consensus 262 ~-~~~~~~~~~~~~~~~p~~~~~~~~~~~ 289 (293)
T PRK05866 262 I-APRVAVAARALDSVAPRAVNALMQRQG 289 (293)
T ss_pred E-cccHHHHHHHHHHhCcHHHHHHHHHhc
Confidence 4 577888888899999988887776643
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=271.79 Aligned_cols=218 Identities=17% Similarity=0.177 Sum_probs=178.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||++|||+++|++|+++|++|++++|+.+++++...++ +..+..+.+| .+.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999988777666554 2357778888 2446
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
+++|++|||||....... +. +.++|++++++|+.++++++++++|+|++++|+||++||.++..+.++...|+++|+|
T Consensus 79 g~id~lv~~ag~~~~~~~-~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa 156 (261)
T PRK08265 79 GRVDILVNLACTYLDDGL-AS-SRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAA 156 (261)
T ss_pred CCCCEEEECCCCCCCCcC-cC-CHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence 899999999998654443 33 4588999999999999999999999997556999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++++++++.|++++ |+||+|+||+++|++....................+.++..+|||+|+++++++++...+++
T Consensus 157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~t 234 (261)
T PRK08265 157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVT 234 (261)
T ss_pred HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCcc
Confidence 999999999999988 99999999999999875432111110001111123556788999999999999998766554
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=270.52 Aligned_cols=224 Identities=21% Similarity=0.243 Sum_probs=183.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++|+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++..+.+| .+.+
T Consensus 2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 45889999999999999999999999999999999999988887776665444567778888 2446
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|++|||||+...+.+.+. +.++|++++++|+.|+++++++++|.|.++ +|+||++||.++..+.++.+.|++||
T Consensus 82 g~id~li~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 160 (275)
T PRK05876 82 GHVDVVFSNAGIVVGGPIVEM-THDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAK 160 (275)
T ss_pred CCCCEEEECCCcCCCCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHH
Confidence 889999999999877777776 468999999999999999999999999655 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc---h--hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG---A--EMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+|+++|+++|+.|++++ |+|++++||+++|++.......... . ...............+|+|+|+.++.++.++
T Consensus 161 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~ 240 (275)
T PRK05876 161 YGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 (275)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC
Confidence 99999999999999887 9999999999999986542110000 0 0000001111234689999999999999998
Q ss_pred CceEEcC
Q 039397 261 DTYVKFP 267 (349)
Q Consensus 261 ~~~i~~p 267 (349)
+.++..+
T Consensus 241 ~~~~~~~ 247 (275)
T PRK05876 241 RLYVLPH 247 (275)
T ss_pred CeEEecC
Confidence 8777643
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=269.39 Aligned_cols=219 Identities=20% Similarity=0.236 Sum_probs=179.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc-hhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-RLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~-~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++...+.++..+.+| .+.+
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 688999999999999999999999999999999999864 3455555554334456777787 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCC--chhhHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPR--MSLYASA 185 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~--~~~Y~as 185 (349)
|++|++|||||+....+..+. +.++|++++++|+.|++.++++++|.|+++ +|+||++||.++..+.++ .+.|+++
T Consensus 85 g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s 163 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEM-EEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNAS 163 (254)
T ss_pred CCCCEEEECCCCCCCCChHhC-CHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHH
Confidence 899999999999876666665 568999999999999999999999999655 489999999999877654 6899999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++++++++.|++++ |+||+|+||+++|++...... .. .........+.++..+|||+|+.+++++++...++
T Consensus 164 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~--~~-~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~ 240 (254)
T PRK06114 164 KAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEM--VH-QTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFC 240 (254)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccc--hH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 999999999999999988 999999999999998753110 11 11111233456788999999999999999887777
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
+.
T Consensus 241 tG 242 (254)
T PRK06114 241 TG 242 (254)
T ss_pred CC
Confidence 64
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=268.79 Aligned_cols=217 Identities=23% Similarity=0.291 Sum_probs=173.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHHhcCCCCeEEEEEecc------------------
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRENRLQGSTIDEYNPINEVTLVSLNN------------------ 105 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~~~~~~~~~~~~~~d~------------------ 105 (349)
+++|+++||||++|||+++|++|+++|++|++++ |+.+++++...++...+.....+.+|.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999999999999999999999999999975 566666666555543344556666661
Q ss_pred ccCC--CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhH
Q 039397 106 KESK--AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 106 ~~~g--~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+..+ ++|+||||||+....++.+. +.++|++++++|+.|++.++++++|.|++ +|+||++||.++..+.++...|+
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~ 159 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEET-TEQFFDRMVSVNAKAPFFIIQQALSRLRD-NSRIINISSAATRISLPDFIAYS 159 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHhhhHHHHHHHHHHHHhhc-CCeEEEECCcccccCCCCchhHH
Confidence 1223 89999999998765556665 56889999999999999999999999965 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++++++++.|++++ |+||+|+||+++|++....... ...........+..+..+|||+|+++.+++++...
T Consensus 160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~ 237 (252)
T PRK12747 160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD--PMMKQYATTISAFNRLGEVEDIADTAAFLASPDSR 237 (252)
T ss_pred HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC--HHHHHHHHhcCcccCCCCHHHHHHHHHHHcCcccc
Confidence 99999999999999999988 9999999999999987543211 10111112222456788999999999999988766
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 238 ~~~ 240 (252)
T PRK12747 238 WVT 240 (252)
T ss_pred CcC
Confidence 654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=270.31 Aligned_cols=222 Identities=18% Similarity=0.184 Sum_probs=177.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcC-CCCeEEEEEec--------------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYN-PINEVTLVSLN-------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~-~~~~~~~~~~d-------------- 104 (349)
|+.+|++|+++||||++|||+++|++|+++|++|++++| +++++++...++.. .+.++..+.+|
T Consensus 2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 456889999999999999999999999999999999875 45556655555532 23467788888
Q ss_pred cccCCCcceeeecCcCCC------CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCC
Q 039397 105 NKESKAVDHLVNTASLGH------TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLP 177 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~ 177 (349)
.+++|++|++|||||+.. ..++.+. +.+++++++++|+.+++.+++.++|.|+++ .|+||++||..+..+.|
T Consensus 82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 160 (260)
T PRK08416 82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRL-KPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIE 160 (260)
T ss_pred HHhcCCccEEEECccccccccccccCChhhC-CHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCC
Confidence 234689999999998753 2344454 458899999999999999999999999765 48999999999998999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 178 RMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 178 ~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
+...|++||+|+++++++++.|++++ |+||+|+||+++|++....... +. .........+..+..+|||+|++++++
T Consensus 161 ~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-~~-~~~~~~~~~~~~r~~~p~~va~~~~~l 238 (260)
T PRK08416 161 NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-EE-VKAKTEELSPLNRMGQPEDLAGACLFL 238 (260)
T ss_pred CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-HH-HHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999988 9999999999999986543211 11 111112233456788999999999999
Q ss_pred HhcCCceEE
Q 039397 257 ACRGDTYVK 265 (349)
Q Consensus 257 ~~~~~~~i~ 265 (349)
+++...+++
T Consensus 239 ~~~~~~~~~ 247 (260)
T PRK08416 239 CSEKASWLT 247 (260)
T ss_pred cChhhhccc
Confidence 988766554
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=274.21 Aligned_cols=212 Identities=18% Similarity=0.169 Sum_probs=174.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc---------chhhhHHHHhcCCCCeEEEEEec----------
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE---------NRLQGSTIDEYNPINEVTLVSLN---------- 104 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~---------~~l~~~~~~~~~~~~~~~~~~~d---------- 104 (349)
.++||+++||||++|||+++|++|+++|++|++++|+. +++++..+++...+..+..+.+|
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 47899999999999999999999999999999999876 56666666664445567777888
Q ss_pred ----cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-------CCeEEEEeccccc
Q 039397 105 ----NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-------NGRVVVNASVENW 173 (349)
Q Consensus 105 ----~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------~g~IV~isS~~~~ 173 (349)
.+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++.
T Consensus 83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~ 161 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGILRDRMIANM-SEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL 161 (286)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence 3456899999999999877667665 568999999999999999999999998643 2799999999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhh--cCCCCHHHHH
Q 039397 174 LPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVH--VAGGPVEDFA 250 (349)
Q Consensus 174 ~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~edvA 250 (349)
.+.++...|++||+|+++|+++++.|++++ |+||+|+|| ++|++....... ... .... .+..+|||+|
T Consensus 162 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~-------~~~-~~~~~~~~~~~pedva 232 (286)
T PRK07791 162 QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAE-------MMA-KPEEGEFDAMAPENVS 232 (286)
T ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHH-------HHh-cCcccccCCCCHHHHH
Confidence 999999999999999999999999999988 999999999 899886432110 000 0111 1357899999
Q ss_pred HHHHHHHhcCCceEE
Q 039397 251 RLIVSGACRGDTYVK 265 (349)
Q Consensus 251 ~~i~~l~~~~~~~i~ 265 (349)
+++++++++...+++
T Consensus 233 ~~~~~L~s~~~~~it 247 (286)
T PRK07791 233 PLVVWLGSAESRDVT 247 (286)
T ss_pred HHHHHHhCchhcCCC
Confidence 999999988666554
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=249.18 Aligned_cols=219 Identities=20% Similarity=0.253 Sum_probs=188.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKA 110 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~ 110 (349)
|..++.|+++++||+..|||++++++|++.|++|+.++|+++.+..+.++.. ..+..+..| ....+.
T Consensus 1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v~p 77 (245)
T KOG1207|consen 1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPVFP 77 (245)
T ss_pred CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhcccCc
Confidence 4457899999999999999999999999999999999999999998877652 225555666 334578
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
+|.||||||+....+|.+.+ .+++++.|++|+.+++.++|.....+..+ +|.|||+||.++..+..+.+.||++|+|
T Consensus 78 idgLVNNAgvA~~~pf~eiT-~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaA 156 (245)
T KOG1207|consen 78 IDGLVNNAGVATNHPFGEIT-QQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAA 156 (245)
T ss_pred hhhhhccchhhhcchHHHHh-HHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHH
Confidence 99999999999999999986 58999999999999999999977666433 3899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++++++|+.|++++ ||||+++|..+.|+|.+..+.+.+. ....-.+.+..++..+|++.++++|+++++++..+
T Consensus 157 LDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K--~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmtt 232 (245)
T KOG1207|consen 157 LDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK--KKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTT 232 (245)
T ss_pred HHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh--ccchhhhCchhhhhHHHHHHhhheeeeecCcCccc
Confidence 999999999999999 9999999999999999887654432 22234456778899999999999999999887654
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=270.96 Aligned_cols=218 Identities=14% Similarity=0.057 Sum_probs=166.8
Q ss_pred cCCCCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCc---------chhh--h-----------------HHH
Q 039397 40 FYSENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRE---------NRLQ--G-----------------STI 89 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~---------~~l~--~-----------------~~~ 89 (349)
+|+.+++||+++||||+ +|||+++|++|+++|++|++.++.+ +..+ . +..
T Consensus 1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (299)
T PRK06300 1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA 80 (299)
T ss_pred CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence 45678999999999996 9999999999999999999987541 0000 0 001
Q ss_pred HhcCCCCeEEEEEe----------------------ccccCCCcceeeecCcCCC--CccccccCCcchHHHHHHhHhhh
Q 039397 90 DEYNPINEVTLVSL----------------------NNKESKAVDHLVNTASLGH--TFFFEEVTDTSIFPRLLDINFWG 145 (349)
Q Consensus 90 ~~~~~~~~~~~~~~----------------------d~~~~g~iDvlVnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g 145 (349)
++. ....+.+ ..+++|++|+||||||... ..++.+. +.++|++++++|+.|
T Consensus 81 d~~----~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~-~~e~~~~~~~vNl~g 155 (299)
T PRK06300 81 SFD----TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLET-SRKGYLAALSTSSYS 155 (299)
T ss_pred hcC----CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhC-CHHHHHHHHHHHhHH
Confidence 111 1111111 1456799999999999754 4567776 569999999999999
Q ss_pred hHHHHHHhccccccCCCeEEEEeccccccCCCCch-hhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcccCCCCCCc
Q 039397 146 NVYPTFVALPYLHESNGRVVVNASVENWLPLPRMS-LYASAKAALVTFYESLRFELND-E-VGITIATHGWIGIEMTKGK 222 (349)
Q Consensus 146 ~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~-~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v~T~~~~~~ 222 (349)
+++++++++|+|++ +|+||+++|+.+..+.|+.. .|++||+|+++|+++|+.|+++ + |+||+|+||+++|++....
T Consensus 156 ~~~l~~a~~p~m~~-~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~ 234 (299)
T PRK06300 156 FVSLLSHFGPIMNP-GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAI 234 (299)
T ss_pred HHHHHHHHHHHhhc-CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcc
Confidence 99999999999965 58999999999998988875 8999999999999999999986 4 9999999999999986532
Q ss_pred cccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 223 FMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
.. .+. .........+..+..+|||+|+.+++++++...+++
T Consensus 235 ~~-~~~-~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~it 275 (299)
T PRK06300 235 GF-IER-MVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAIT 275 (299)
T ss_pred cc-cHH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence 11 011 111112223456788999999999999998766654
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=267.39 Aligned_cols=211 Identities=19% Similarity=0.271 Sum_probs=172.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++||+++||||++|||+++|++|+++|++|++++|+++... .+..+.+| .+++
T Consensus 2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----------~~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----------DVDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----------ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4688999999999999999999999999999999999865421 35566666 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||+....++.+. +.++|++++++|+.|++.++++++|+|+++ .|+||++||.++..+.++...|++||+
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 149 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAV-EEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH 149 (258)
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence 899999999999877777775 568999999999999999999999999654 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc---cchhh----hhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE---DGAEM----QWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|+++++++++.|++++|+||+|+||+++|++........ +.... .......+.++..+|||+|+++++++++.
T Consensus 150 al~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~ 229 (258)
T PRK06398 150 AVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL 229 (258)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999987799999999999999875432111 00000 00012234567889999999999999987
Q ss_pred CceEE
Q 039397 261 DTYVK 265 (349)
Q Consensus 261 ~~~i~ 265 (349)
..+++
T Consensus 230 ~~~~~ 234 (258)
T PRK06398 230 ASFIT 234 (258)
T ss_pred cCCCC
Confidence 66554
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=260.69 Aligned_cols=221 Identities=28% Similarity=0.331 Sum_probs=186.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
+|+++||||++|||++++++|+++|++|++++|+.+++++...++.... ++..+.+| .++.|++|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 4799999999999999999999999999999999888877666554333 67788888 23467899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
++|||||........+..+.+++++++++|+.|+++++++++|.|++++ |+||++||.++..+.+....|++||++++.
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 160 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK 160 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence 9999999865444433235688999999999999999999999996554 899999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcCchH
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWY 270 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p~~~ 270 (349)
++++++.|++++ |+|++++||+++|++...... ......+||++|+.++.++.+++.+++.|+..
T Consensus 161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------------~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~ 226 (257)
T PRK07024 161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPY--------------PMPFLMDADRFAARAARAIARGRRFRVIPWQM 226 (257)
T ss_pred HHHHHHHHhhccCcEEEEEecCCCcCchhhcCCC--------------CCCCccCHHHHHHHHHHHHhCCCcEEECCchH
Confidence 999999999887 999999999999997643210 01134689999999999999999999899877
Q ss_pred HHHHHHHHhchH
Q 039397 271 DVFLLYRVFAPH 282 (349)
Q Consensus 271 ~~~~~~~~~~P~ 282 (349)
.....+.+++|.
T Consensus 227 ~~~~~~~~~~p~ 238 (257)
T PRK07024 227 GVVAKLLRVLPR 238 (257)
T ss_pred HHHHHHHHHCcH
Confidence 777777788886
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=268.29 Aligned_cols=220 Identities=18% Similarity=0.200 Sum_probs=176.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+.+++|+++||||++|||++++++|+++|++|++++|+++++++...+. ...+..+.+| .+.+
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 3478999999999999999999999999999999999988877665554 2345667777 2456
Q ss_pred CCcceeeecCcCCCC-ccccccCCcch----HHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhH
Q 039397 109 KAVDHLVNTASLGHT-FFFEEVTDTSI----FPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 109 g~iDvlVnnAg~~~~-~~~~~~~~~~~----~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
|++|++|||||+... .++.+. +.++ |++++++|+.+++.++++++|.|++++|+||+++|.++..+.++...|+
T Consensus 79 g~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 157 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDI-PAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYT 157 (263)
T ss_pred CCCCEEEECCCCcccCCCcccC-ChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhH
Confidence 899999999998643 344343 2333 8999999999999999999999987779999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc-c------cchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML-E------DGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
+||+|+++|+++++.|++++|+||+|+||+++|++....... . ............+.++..+|||+|++++++
T Consensus 158 ~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl 237 (263)
T PRK06200 158 ASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLL 237 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhhe
Confidence 999999999999999998789999999999999986432100 0 000011112234567889999999999999
Q ss_pred HhcC-CceEEc
Q 039397 257 ACRG-DTYVKF 266 (349)
Q Consensus 257 ~~~~-~~~i~~ 266 (349)
+++. ..+++.
T Consensus 238 ~s~~~~~~itG 248 (263)
T PRK06200 238 ASRRNSRALTG 248 (263)
T ss_pred ecccccCcccc
Confidence 9988 777653
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=264.69 Aligned_cols=220 Identities=18% Similarity=0.233 Sum_probs=184.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|++|||||++|||++++++|+++|++|++++|+.+++++...++.........+.+| .+.++
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG 85 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999999888887777665444566777777 24468
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||.....++.+. +.++|++++++|+.+++.+++++++.|+++ .|+||++||..+..+.++.+.|+++|+|
T Consensus 86 ~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 164 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEF-PEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGA 164 (254)
T ss_pred CCCEEEECCCcCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHH
Confidence 89999999998776677765 468999999999999999999999998654 4899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+++++++++.|++++ |+||+|+||+++|++....... .....+.....+..+..+|||+|+++.+++++..++++.
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G 241 (254)
T PRK08085 165 VKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--EAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNG 241 (254)
T ss_pred HHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcC
Confidence 999999999999988 9999999999999987643211 111122233445678889999999999999988877764
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=263.12 Aligned_cols=240 Identities=22% Similarity=0.222 Sum_probs=189.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
|++|+++||||+||||++++++|+++|++|++++|+.+++++... ..+..+.+| .+.+++
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~ 74 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------LGVHPLSLDVTDEASIKAAVDTIIAEEGR 74 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh------CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 367999999999999999999999999999999999887665432 135566777 234678
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+|++|||||+...+++.+. +.+++++++++|+.|++.+++.++|.|++++ |+||++||..+..+.+....|++||+++
T Consensus 75 id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~ 153 (273)
T PRK06182 75 IDVLVNNAGYGSYGAIEDV-PIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFAL 153 (273)
T ss_pred CCEEEECCCcCCCCchhhC-CHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHH
Confidence 9999999999887777776 5689999999999999999999999997655 8999999999988888889999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc----ccchh-hh-------hHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML----EDGAE-MQ-------WKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~----~~~~~-~~-------~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
++++++++.|+++. |++++++||+++|++....... ..... .. ......+..+..+|+|+|++++++
T Consensus 154 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~ 233 (273)
T PRK06182 154 EGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKA 233 (273)
T ss_pred HHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHH
Confidence 99999999999888 9999999999999985321100 00000 00 001112345678999999999999
Q ss_pred HhcCC--ceEEcCchHHHHHHHHHhchH-HHHHHHHHh
Q 039397 257 ACRGD--TYVKFPSWYDVFLLYRVFAPH-VLNWTFRLL 291 (349)
Q Consensus 257 ~~~~~--~~i~~p~~~~~~~~~~~~~P~-~~~~~~~~l 291 (349)
++++. ..+..++.......+..++|. +.+++.+.+
T Consensus 234 ~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~ 271 (273)
T PRK06182 234 VTARRPKTRYAVGFGAKPLIFLRRILPDRAFDRLIMSA 271 (273)
T ss_pred HhCCCCCceeecCcchHHHHHHHHHCcHHHHHHHHHHh
Confidence 99753 345556666777788899994 455665543
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=266.71 Aligned_cols=219 Identities=22% Similarity=0.247 Sum_probs=173.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|+++||||++|||++++++|+++|++|++++|+.+.++++.... ..++..+.+| .++++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH---GDAVVGVEGDVRSLDDHKEAVARCVAAFG 78 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc---CCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999999999999987776654321 2346667777 23458
Q ss_pred CcceeeecCcCCCC-ccccccCC---cchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHH
Q 039397 110 AVDHLVNTASLGHT-FFFEEVTD---TSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 110 ~iDvlVnnAg~~~~-~~~~~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++|+||||||+... .++.+.++ .++|++++++|+.++++++++++|.|++++|+||+++|..+..+.++...|++|
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 158 (262)
T TIGR03325 79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAA 158 (262)
T ss_pred CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHH
Confidence 99999999997532 33333322 146899999999999999999999997767899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc-ccc-----hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 186 KAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML-EDG-----AEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
|+|+++|+++++.|++++|+||+|+||+++|++....... ... ..........+.++..+|||+|+++++++++
T Consensus 159 Kaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~ 238 (262)
T TIGR03325 159 KHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATR 238 (262)
T ss_pred HHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecC
Confidence 9999999999999998779999999999999986532110 000 0011112234567889999999999999987
Q ss_pred C-CceEE
Q 039397 260 G-DTYVK 265 (349)
Q Consensus 260 ~-~~~i~ 265 (349)
+ ..+++
T Consensus 239 ~~~~~~t 245 (262)
T TIGR03325 239 GDTVPAT 245 (262)
T ss_pred CCccccc
Confidence 5 34544
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=262.44 Aligned_cols=220 Identities=16% Similarity=0.146 Sum_probs=177.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.++++||+++||||++|||+++|++|+++|++|++++++.. ++..+++...+.....+++| .++
T Consensus 5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (253)
T PRK08993 5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE 82 (253)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999887643 23333332223456777777 344
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++++|++|||||.....++.+. +.++|++++++|+.+++.++++++|+|+++ +|+||++||..+..+.++...|++|
T Consensus 83 ~~~~D~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 161 (253)
T PRK08993 83 FGHIDILVNNAGLIRREDAIEF-SEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS 161 (253)
T ss_pred hCCCCEEEECCCCCCCCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence 6899999999998776666665 458899999999999999999999998654 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++++++++.|+.++ |+||+|+||+++|++....... +. .........+..++.+|+|+|+.+++++++..+++
T Consensus 162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~-~~-~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~ 239 (253)
T PRK08993 162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD-EQ-RSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYI 239 (253)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc-hH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence 999999999999999988 9999999999999987543211 11 11111122345678999999999999999887776
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
+.
T Consensus 240 ~G 241 (253)
T PRK08993 240 NG 241 (253)
T ss_pred cC
Confidence 53
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=263.90 Aligned_cols=235 Identities=17% Similarity=0.223 Sum_probs=185.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------c-cCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------K-ESKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~-~~g~i 111 (349)
+|+++||||+||||+++|++|+++|++|++++|+.+.++++... .+..+.+|. + ..|++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~------~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i 77 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE------GLEAFQLDYAEPESIAALVAQVLELSGGRL 77 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC------CceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence 68999999999999999999999999999999998877654421 345566671 1 13689
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|++|||||+...+.+.+. +.++++.++++|+.|++++++.++|.|++++ |+||++||..+..+.++.+.|++||+|++
T Consensus 78 d~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 156 (277)
T PRK05993 78 DALFNNGAYGQPGAVEDL-PTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE 156 (277)
T ss_pred cEEEECCCcCCCCCcccC-CHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence 999999999888877775 5688999999999999999999999997654 89999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc-------cchh-hhhH-------HHHhhhcCCCCHHHHHHHHH
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE-------DGAE-MQWK-------EEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~-------~~~~-~~~~-------~~~~~~~~~~~~edvA~~i~ 254 (349)
+|+++++.|++++ |+|++|+||+++|++........ .... ..+. ..........+||++|+.++
T Consensus 157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~ 236 (277)
T PRK05993 157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLL 236 (277)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence 9999999999988 99999999999999876432110 0000 0000 00011223578999999999
Q ss_pred HHHhcCCc--eEEcCchHHHHHHHHHhchH-HHHHHH
Q 039397 255 SGACRGDT--YVKFPSWYDVFLLYRVFAPH-VLNWTF 288 (349)
Q Consensus 255 ~l~~~~~~--~i~~p~~~~~~~~~~~~~P~-~~~~~~ 288 (349)
.++.+++. .+..++.......+.+++|. +..++.
T Consensus 237 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 273 (277)
T PRK05993 237 HALTAPRPRPHYRVTTPAKQGALLKRLLPARWLYRLL 273 (277)
T ss_pred HHHcCCCCCCeeeeCchhHHHHHHHHHCCHHHHHHHH
Confidence 99998865 33445566677788889995 444443
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=258.63 Aligned_cols=239 Identities=24% Similarity=0.266 Sum_probs=200.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------------ccCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------------KESK 109 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------------~~~g 109 (349)
|++++|+++||||++|||++++++|+++|++|++++|+++++++...++. ....+..+.+|. ...+
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-YPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 45789999999999999999999999999999999999888877766652 334677788882 1257
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||.....++.+. +.+++++++++|+.|++++++.++|+|.+++ |+||++||..+..+.++...|+++|++
T Consensus 80 ~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 158 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQ-DPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFA 158 (263)
T ss_pred CCCEEEECCCCCCccccccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHH
Confidence 89999999998776666665 5688999999999999999999999997654 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcC
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFP 267 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p 267 (349)
+.+++++++.|+.++ |+|++++||+++|++........ .........+|+|+|+.++++++++...++.+
T Consensus 159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~---------~~~~~~~~~~~~~va~~i~~~~~~~~~~~~~~ 229 (263)
T PRK09072 159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQAL---------NRALGNAMDDPEDVAAAVLQAIEKERAERWLG 229 (263)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccc---------cccccCCCCCHHHHHHHHHHHHhCCCCEEecC
Confidence 999999999999888 99999999999999764321100 00112256789999999999999999888888
Q ss_pred chHHHHHHHHHhchHHHHHHHHHhc
Q 039397 268 SWYDVFLLYRVFAPHVLNWTFRLLI 292 (349)
Q Consensus 268 ~~~~~~~~~~~~~P~~~~~~~~~l~ 292 (349)
++......+..++|.++.+..+...
T Consensus 230 ~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (263)
T PRK09072 230 WPEKLFVRLNGLLPSLVDRALRKQL 254 (263)
T ss_pred chHHHHHHHHHHChHHHHHHHHhcC
Confidence 8888888889999998887766644
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-35 Score=262.27 Aligned_cols=223 Identities=19% Similarity=0.256 Sum_probs=182.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|.+++++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++...+.++..+.+| .+
T Consensus 1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999999999888777666664444567778887 23
Q ss_pred cCCCcceeeecCcCCCCcc-ccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGHTFF-FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.+|++|++|||||...... +.+. +.+++++++++|+.+++.++++++|.|+++ .|+||++||..+..+.++...|++
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~ 159 (253)
T PRK06172 81 AYGRLDYAFNNAGIEIEQGRLAEG-SEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAA 159 (253)
T ss_pred HhCCCCEEEECCCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHH
Confidence 4588999999999865433 4454 568999999999999999999999998654 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+|+|+++++++++.|+.++ |+|++++||+++|++.+......+. .........+..+..+|+|+|+.+++++++...+
T Consensus 160 sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~ 238 (253)
T PRK06172 160 SKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPR-KAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASF 238 (253)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChH-HHHHHhccCCCCCccCHHHHHHHHHHHhCccccC
Confidence 9999999999999999888 9999999999999997654321111 1111122334567889999999999999987665
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 239 ~~ 240 (253)
T PRK06172 239 TT 240 (253)
T ss_pred cC
Confidence 54
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=263.23 Aligned_cols=224 Identities=23% Similarity=0.229 Sum_probs=181.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEecc----------ccCC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLNN----------KESK 109 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d~----------~~~g 109 (349)
|.+++++|+++||||++|||+++++.|+++|++|++++|+.+++++...++.. ...++..+.+|. +..+
T Consensus 1 ~~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 80 (259)
T PRK06125 1 MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG 80 (259)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC
Confidence 44578899999999999999999999999999999999998888776666532 234567777872 3468
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||.....++.+. +.++|++++++|+.++++++++++|.|+++ .|+||++||..+..+.++...|+++|+|
T Consensus 81 ~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~a 159 (259)
T PRK06125 81 DIDILVNNAGAIPGGGLDDV-DDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAA 159 (259)
T ss_pred CCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHH
Confidence 99999999998776777775 568999999999999999999999999765 4899999999999888889999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccccc----chhhhhH--HHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLED----GAEMQWK--EEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+++++++++.|+.++ |+||+|+||+++|++......... .....+. ....+..+..+|+|+|+++++++++..
T Consensus 160 l~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 239 (259)
T PRK06125 160 LMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRS 239 (259)
T ss_pred HHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchh
Confidence 999999999999988 999999999999997543211000 0011111 112344678899999999999998776
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
.+++
T Consensus 240 ~~~~ 243 (259)
T PRK06125 240 GYTS 243 (259)
T ss_pred cccc
Confidence 6654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=258.43 Aligned_cols=223 Identities=19% Similarity=0.224 Sum_probs=184.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcch-hhhHHHHhcCC-CCeEEEEEecc-------------ccCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENR-LQGSTIDEYNP-INEVTLVSLNN-------------KESK 109 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~-l~~~~~~~~~~-~~~~~~~~~d~-------------~~~g 109 (349)
++|+++||||++|||+++|++|+++| ++|++++|++++ +++..+++... ..++.++.+|. .+.|
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 57899999999999999999999995 999999999886 77776666332 23677888881 1237
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||+|...... ....+.++..+++++|+.+++.++++++|.|++++ |+||++||..+..+.++...|++||+|
T Consensus 87 ~id~li~~ag~~~~~~-~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa 165 (253)
T PRK07904 87 DVDVAIVAFGLLGDAE-ELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAG 165 (253)
T ss_pred CCCEEEEeeecCCchh-hcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHH
Confidence 8999999999864321 11112344567899999999999999999997654 999999999998888888999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcC
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFP 267 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p 267 (349)
+.+|+++++.|+.++ |+|++++||+++|++...... .....+|||+|+.++..+.+++..+..|
T Consensus 166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~---------------~~~~~~~~~~A~~i~~~~~~~~~~~~~~ 230 (253)
T PRK07904 166 LDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE---------------APLTVDKEDVAKLAVTAVAKGKELVWAP 230 (253)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC---------------CCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 999999999999988 999999999999998764210 0135789999999999999999999999
Q ss_pred chHHHHHHHHHhchHHH
Q 039397 268 SWYDVFLLYRVFAPHVL 284 (349)
Q Consensus 268 ~~~~~~~~~~~~~P~~~ 284 (349)
.++..+..+.+++|+.+
T Consensus 231 ~~~~~~~~~~~~~p~~~ 247 (253)
T PRK07904 231 PAFRYVMMVLRHIPRPI 247 (253)
T ss_pred hhHHHHHHHHHhCCHHH
Confidence 99998888888999633
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=266.99 Aligned_cols=219 Identities=18% Similarity=0.250 Sum_probs=175.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc--chhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE--NRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~--~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
++++|+++||||++|||+++|++|+++|++|++++|+. +..+++.+.+...+..+..+.+| .+.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999998754 33444444433334456777887 245
Q ss_pred CCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|++|||||... ..++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++..+|++||
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~iv~iSS~~~~~~~~~~~~Y~asK 203 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADL-TSEQFQKTFAINVFALFWLTQEAIPLLPK-GASIITTSSIQAYQPSPHLLDYAATK 203 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHhhhc-CCEEEEECCchhccCCCCcchhHHHH
Confidence 689999999999753 3445554 46899999999999999999999999964 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++++++++.|++++ |+||+|+||+++|++...... ............+.++..+|||+|+++++++++...+++
T Consensus 204 aal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~it 281 (294)
T PRK07985 204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ--TQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVT 281 (294)
T ss_pred HHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC--CHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCcc
Confidence 99999999999999887 999999999999998532111 111111112233556788999999999999998877765
Q ss_pred c
Q 039397 266 F 266 (349)
Q Consensus 266 ~ 266 (349)
.
T Consensus 282 G 282 (294)
T PRK07985 282 A 282 (294)
T ss_pred c
Confidence 4
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=264.43 Aligned_cols=221 Identities=21% Similarity=0.301 Sum_probs=180.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++..+.+| .+.++
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6789999999999999999999999999999999999888777776664444567778888 23458
Q ss_pred CcceeeecCcCCCCc---------------cccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccc
Q 039397 110 AVDHLVNTASLGHTF---------------FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENW 173 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~---------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~ 173 (349)
++|++|||||..... ++.+. +.++|++++++|+.+++.++++++|.|+++ .|+||++||.++.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~ 165 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDL-DEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF 165 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence 999999999975432 23343 458899999999999999999999999755 4899999999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh---hhhHHHHhhhcCCCCHHHH
Q 039397 174 LPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE---MQWKEEREVHVAGGPVEDF 249 (349)
Q Consensus 174 ~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~edv 249 (349)
.+.++...|++||+|+++++++++.|++++ |+||+|+||+++|++.+......+... ........+.++..+|||+
T Consensus 166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv 245 (278)
T PRK08277 166 TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEEL 245 (278)
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHH
Confidence 999999999999999999999999999988 999999999999998654322111110 0111123456788899999
Q ss_pred HHHHHHHHhc-CCceEE
Q 039397 250 ARLIVSGACR-GDTYVK 265 (349)
Q Consensus 250 A~~i~~l~~~-~~~~i~ 265 (349)
|+++++++++ ...+++
T Consensus 246 a~~~~~l~s~~~~~~~t 262 (278)
T PRK08277 246 LGTLLWLADEKASSFVT 262 (278)
T ss_pred HHHHHHHcCccccCCcC
Confidence 9999999998 666654
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=258.52 Aligned_cols=244 Identities=19% Similarity=0.225 Sum_probs=196.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC-CCeEEEEEec--------------cccCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP-INEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~-~~~~~~~~~d--------------~~~~g~iD 112 (349)
|+++||||++|||++++++|+++|++|++++|+++.+++...++... ......+.+| .+..+++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999999999999999999988877766665322 2233445666 23467899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
++|||||......+.+. +.+++++.+++|+.|++.++++++|.|.++ +|+||++||..+..+.++...|+++|+|++
T Consensus 81 ~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 159 (272)
T PRK07832 81 VVMNIAGISAWGTVDRL-THEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR 159 (272)
T ss_pred EEEECCCCCCCCccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence 99999998776666665 568999999999999999999999999653 489999999999989999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc-hhhhhH-HHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcC
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG-AEMQWK-EEREVHVAGGPVEDFARLIVSGACRGDTYVKFP 267 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p 267 (349)
+++++++.|+.++ |+|++++||+++|++.+.......+ ...... .......+..+|||+|+.+++++++++..+..+
T Consensus 160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~~~~~~~ 239 (272)
T PRK07832 160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKNRYLVYTS 239 (272)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcCCeEEecC
Confidence 9999999999887 9999999999999987643111000 000001 111123467899999999999999888888888
Q ss_pred chHHHHHHHHHhchHHHHHHHHHhc
Q 039397 268 SWYDVFLLYRVFAPHVLNWTFRLLI 292 (349)
Q Consensus 268 ~~~~~~~~~~~~~P~~~~~~~~~l~ 292 (349)
......+++.+++|..+++.+++..
T Consensus 240 ~~~~~~~~~~~~~p~~~~~~~~~~~ 264 (272)
T PRK07832 240 PDIRALYWFKRKAWWPYSLVMRQVN 264 (272)
T ss_pred cchHHHHHHHhcCchHHHHHHHHHH
Confidence 8888888999999988887776654
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=258.53 Aligned_cols=241 Identities=23% Similarity=0.255 Sum_probs=195.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccCCCcce
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KESKAVDH 113 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g~iDv 113 (349)
|+++||||+||||++++++|+++|++|++++|+.+++++...++...+.+...+.+|. +.++++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999999999999888877776654455677888882 34578999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHHH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTF 192 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 192 (349)
+|||||....+.+.+. +.+++++++++|+.+++.+++.++|.|++++ |+||++||..+..+.++.+.|+++|++++++
T Consensus 81 lI~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (270)
T PRK05650 81 IVNNAGVASGGFFEEL-SLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL 159 (270)
T ss_pred EEECCCCCCCCCcccC-CHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence 9999999877777775 4688999999999999999999999997654 8999999999999999999999999999999
Q ss_pred HHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcCchHH
Q 039397 193 YESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYD 271 (349)
Q Consensus 193 ~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p~~~~ 271 (349)
+++++.|+.+. |++++++||+++|++.......... .............++++|+|+.++.+++++..++..+....
T Consensus 160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~~~~~~~~~~~~ 237 (270)
T PRK05650 160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPA--MKAQVGKLLEKSPITAADIADYIYQQVAKGEFLILPHEQGR 237 (270)
T ss_pred HHHHHHHhcccCcEEEEEecCccccCcccccccCchh--HHHHHHHHhhcCCCCHHHHHHHHHHHHhCCCEEEecCchHH
Confidence 99999999887 9999999999999987653222111 11111111223468999999999999999887666555556
Q ss_pred HHHHHHHhchHHHHHHHHHh
Q 039397 272 VFLLYRVFAPHVLNWTFRLL 291 (349)
Q Consensus 272 ~~~~~~~~~P~~~~~~~~~l 291 (349)
....+..++|..+.+....+
T Consensus 238 ~~~~~~~~~p~~~~~~~~~~ 257 (270)
T PRK05650 238 RAWQLKRQAPQALYDEMTLM 257 (270)
T ss_pred HHHHHHHHChHHHHHHHHHh
Confidence 77778888997554444433
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=260.98 Aligned_cols=219 Identities=19% Similarity=0.179 Sum_probs=179.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|++|||||++|||++++++|+++|++|++++|+ ++.++..+.+......+..+.+| .+.+
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999998 55555555543334567788888 3446
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|++|||||.....++.+. +.++|++++++|+.+++.++++++|.|+++ .|+||++||..+..+.++.+.|+++|+
T Consensus 90 g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 168 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEY-KDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKH 168 (258)
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHH
Confidence 789999999998776666665 458899999999999999999999999765 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++++++++.|++++ |+||+|+||+++|++....... +. .........+..+..+|+|+|+.+.+++++..++++
T Consensus 169 a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~ 245 (258)
T PRK06935 169 GVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-KN-RNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVN 245 (258)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-hH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCC
Confidence 9999999999999988 9999999999999986543211 11 111111223456889999999999999998776654
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=261.47 Aligned_cols=216 Identities=20% Similarity=0.146 Sum_probs=175.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCccee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDHL 114 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDvl 114 (349)
+++||||++|||+++|++|+++|++|++++|+++++++..+++...+ .+..+.+| .+.+|++|+|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 69999999999999999999999999999999988887777764332 56777888 2356899999
Q ss_pred eecCcCCC--CccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 115 VNTASLGH--TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 115 VnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|||||... ...+.+. +.++|.+.+++|+.+++++++.++|.|.+ .+|+||++||.++..+.++...|+++|+|++
T Consensus 81 i~naG~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~ 159 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEA-GYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLV 159 (259)
T ss_pred EECCCCCCCCccccccc-cHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHH
Confidence 99999754 2345554 45789999999999999999999998753 3589999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc-------ccch-hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML-------EDGA-EMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+++++++.|++++ |+||+|+||+++|++.+..... .... .........+.++..+|||+|+++++++++..
T Consensus 160 ~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~ 239 (259)
T PRK08340 160 QLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENA 239 (259)
T ss_pred HHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCccc
Confidence 9999999999988 9999999999999987532110 0000 00011123356788999999999999999988
Q ss_pred ceEEc
Q 039397 262 TYVKF 266 (349)
Q Consensus 262 ~~i~~ 266 (349)
++++.
T Consensus 240 ~~itG 244 (259)
T PRK08340 240 EYMLG 244 (259)
T ss_pred ccccC
Confidence 77764
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=258.22 Aligned_cols=219 Identities=19% Similarity=0.235 Sum_probs=180.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++.........+.+| .+.++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG 84 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 6889999999999999999999999999999999999888877777664444566777887 23457
Q ss_pred CcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 110 AVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 110 ~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++|++|||||... ..++.+. +.+++++++++|+.+++.++++++|+|+++ .|+||++||..+..+.++.+.|++||+
T Consensus 85 ~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 163 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDT-DLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKA 163 (252)
T ss_pred CCCEEEECCCcCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHH
Confidence 8999999999753 3444444 568899999999999999999999999654 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++++++++++.|+.++ |+|++|+||+++|++......... .........+..+..+|||+|+.+++++++...+++
T Consensus 164 al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 240 (252)
T PRK07035 164 AVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDA--ILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTT 240 (252)
T ss_pred HHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHH--HHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCcc
Confidence 9999999999999988 999999999999998765432111 111112223456788999999999999998766554
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=259.51 Aligned_cols=219 Identities=26% Similarity=0.388 Sum_probs=171.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|.+++++|+++||||++|||+++|++|+++|++|++++|+.++..+ ++... .+..+.+| .+
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~---~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAK---ELREK--GVFTIKCDVGNRDQVKKSKEVVEK 75 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHH---HHHhC--CCeEEEecCCCHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999998876543222 22111 35567777 33
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc-CCCeEEEEecccccc-CCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-SNGRVVVNASVENWL-PLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~~g~IV~isS~~~~~-~~~~~~~Y~a 184 (349)
.++++|++|||||+....++.+. +.++|++++++|+.|+++++++++|.|++ ++|+||++||.++.. +.++.+.|++
T Consensus 76 ~~~~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 154 (255)
T PRK06463 76 EFGRVDVLVNNAGIMYLMPFEEF-DEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAI 154 (255)
T ss_pred HcCCCCEEEECCCcCCCCChhhC-CHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHH
Confidence 46899999999998766666665 45889999999999999999999999974 458999999998875 4567889999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc-hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG-AEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
||+|+++++++++.|++++ |+||+++||+++|++........+. ..........+.++..+|+|+|+.+++++++...
T Consensus 155 sKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 234 (255)
T PRK06463 155 TKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDAR 234 (255)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhc
Confidence 9999999999999999988 9999999999999987542211110 0111112234456788999999999999988765
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 235 ~~~ 237 (255)
T PRK06463 235 YIT 237 (255)
T ss_pred CCC
Confidence 543
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=259.00 Aligned_cols=220 Identities=20% Similarity=0.258 Sum_probs=184.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+++||+++||||++|||++++++|+++|++|++++|+++++++....+...+.++..+.+| .+.+
T Consensus 6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 35789999999999999999999999999999999999988877766664444567778888 2346
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||.....++.+. +.++|++++++|+.+++++++++.+.|.++ .|+||++||..+..+.++.+.|+++|+
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~ 164 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDF-PADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKG 164 (255)
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHH
Confidence 789999999999877777775 468999999999999999999999999654 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++++++++++.|++++ |+||+++||+++|++....... .....+.....+..+...|||+|+++++++++...+++
T Consensus 165 a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~ 241 (255)
T PRK07523 165 AVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVN 241 (255)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence 9999999999999888 9999999999999986543211 11112223344566788999999999999998766654
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=263.29 Aligned_cols=218 Identities=21% Similarity=0.241 Sum_probs=175.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc--hhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN--RLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~--~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.++||++|||||++|||+++|++|+++|++|++++++.+ ..++..+.+...+.+...+.+| .+.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999987643 3344444444445567778888 234
Q ss_pred CCCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
++++|+||||||.... .++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||..++.+.++...|++||
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~asK 209 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADI-TTEQFDATFKTNVYAMFWLCKAAIPHLPP-GASIINTGSIQSYQPSPTLLDYASTK 209 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHhcCc-CCEEEEECCccccCCCCCchhHHHHH
Confidence 6899999999998643 445554 56899999999999999999999999964 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++++.|+.++ |+||+|+||+++|++...... ............+.++..+|+|+|+++++++++...+++
T Consensus 210 ~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~ 287 (300)
T PRK06128 210 AAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ--PPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVT 287 (300)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC--CHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 99999999999999888 999999999999998643211 111111112234566888999999999999998766554
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=256.13 Aligned_cols=217 Identities=20% Similarity=0.205 Sum_probs=174.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+++||+++||||++|||+++|++|+++|++|++++|++. ++..+.+...+..+..+.+| .+..+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999999752 23333332233457777888 23457
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++|++|||||.....++.+. +.++|++++++|+.+++.++++++|+|+++ .|+||++||..+..+.+....|++||+
T Consensus 80 ~~d~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa 158 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEF-SEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH 158 (248)
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence 89999999999877666665 458899999999999999999999998654 489999999999988888999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++++++++.|+.++ |+||+++||+++|++.+..... .. .........+.++..+|||+|+++++++++...+++
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~ 235 (248)
T TIGR01832 159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD-ED-RNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVN 235 (248)
T ss_pred HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC-hH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcC
Confidence 9999999999999988 9999999999999987543211 11 111111223456789999999999999987665543
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=258.84 Aligned_cols=225 Identities=19% Similarity=0.197 Sum_probs=177.8
Q ss_pred ccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------
Q 039397 39 NFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------- 104 (349)
Q Consensus 39 ~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------- 104 (349)
.+...+++||+++||||++|||++++++|+++|++|++++|+.+..++...++.. ..++..+.+|
T Consensus 10 ~~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (280)
T PLN02253 10 SLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFT 88 (280)
T ss_pred cccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHH
Confidence 4445678899999999999999999999999999999999998777666655532 3457778888
Q ss_pred cccCCCcceeeecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchh
Q 039397 105 NKESKAVDHLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~ 181 (349)
.+.+|++|+||||||.... ..+.+. +.++|++++++|+.|+++++++++|.|.++ +|+||+++|.++..+.++...
T Consensus 89 ~~~~g~id~li~~Ag~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~ 167 (280)
T PLN02253 89 VDKFGTLDIMVNNAGLTGPPCPDIRNV-ELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHA 167 (280)
T ss_pred HHHhCCCCEEEECCCcCCCCCCCcccC-CHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcc
Confidence 2345789999999998643 345554 568999999999999999999999998653 589999999999988888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhH------H-HHhhhcCCCCHHHHHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWK------E-EREVHVAGGPVEDFARLI 253 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~edvA~~i 253 (349)
|++||+|+++++++++.|++++ |+||+++||+++|++................ . .........+|+|+|+++
T Consensus 168 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~ 247 (280)
T PLN02253 168 YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAV 247 (280)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHH
Confidence 9999999999999999999988 9999999999999986433221111000000 0 011123457899999999
Q ss_pred HHHHhcCCceEE
Q 039397 254 VSGACRGDTYVK 265 (349)
Q Consensus 254 ~~l~~~~~~~i~ 265 (349)
++++++...+++
T Consensus 248 ~~l~s~~~~~i~ 259 (280)
T PLN02253 248 LFLASDEARYIS 259 (280)
T ss_pred HhhcCccccccc
Confidence 999998766654
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=259.16 Aligned_cols=209 Identities=17% Similarity=0.149 Sum_probs=166.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------cccCCCcce
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------NKESKAVDH 113 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------~~~~g~iDv 113 (349)
+|+++|||| +|||+++|++|+ +|++|++++|+++++++..+++...+.++..+.+| .++++++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 589999998 699999999996 89999999999888777766664444467778888 233588999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------------
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL----------------- 176 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~----------------- 176 (349)
||||||+.. ..++|++++++|+.|+++++++++|+|++ +|++|++||.++..+.
T Consensus 80 li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~ 150 (275)
T PRK06940 80 LVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP-GGAGVVIASQSGHRLPALTAEQERALATTPTEE 150 (275)
T ss_pred EEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh-CCCEEEEEecccccCcccchhhhcccccccccc
Confidence 999999752 12568999999999999999999999964 4789999999887642
Q ss_pred -------------CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcC
Q 039397 177 -------------PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVA 242 (349)
Q Consensus 177 -------------~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (349)
++...|++||+|+++++++++.|++++ |+||+|+||+++|++....................+.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r 230 (275)
T PRK06940 151 LLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGR 230 (275)
T ss_pred ccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCccc
Confidence 246789999999999999999999988 999999999999998754322111111111122335678
Q ss_pred CCCHHHHHHHHHHHHhcCCceEEc
Q 039397 243 GGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 243 ~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
..+|||+|+++++++++...+++.
T Consensus 231 ~~~peeia~~~~fL~s~~~~~itG 254 (275)
T PRK06940 231 PGTPDEIAALAEFLMGPRGSFITG 254 (275)
T ss_pred CCCHHHHHHHHHHHcCcccCcccC
Confidence 899999999999999988777654
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=256.16 Aligned_cols=222 Identities=23% Similarity=0.288 Sum_probs=179.9
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
|..++++|+++||||++|||+++|++|+++|++|++++|+. +..+....++...+.++..+.+| .
T Consensus 1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999864 34444555553334567777887 2
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+..+++|++|||||.....++.+. +.++|++++++|+.+++.++++++|.|.++ +|+||++||..+..+.++..+|+
T Consensus 81 ~~~g~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 159 (261)
T PRK08936 81 KEFGTLDVMINNAGIENAVPSHEM-SLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYA 159 (261)
T ss_pred HHcCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccH
Confidence 345789999999998777666665 568899999999999999999999999754 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++|+|+++++++++.|+.++ |+||+|+||+++|++....+... . .........+..+..+|+|+|+.+.+++++...
T Consensus 160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~ 237 (261)
T PRK08936 160 ASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADP-K-QRADVESMIPMGYIGKPEEIAAVAAWLASSEAS 237 (261)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCH-H-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccC
Confidence 99999999999999999888 99999999999999865432111 1 111111223456788999999999999998766
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 238 ~~~ 240 (261)
T PRK08936 238 YVT 240 (261)
T ss_pred Ccc
Confidence 654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=256.73 Aligned_cols=221 Identities=23% Similarity=0.225 Sum_probs=182.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+.++..+.+| .+..
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 36789999999999999999999999999999999999988887776665444567788888 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||+....++.+. +.+++++++++|+.|++.++++++|+|+++ .|+||++||..+..+.++...|+++|+
T Consensus 86 ~~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 164 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEM-SAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKG 164 (265)
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHH
Confidence 889999999999877776665 568999999999999999999999999764 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc---cc-hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE---DG-AEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
|+++++++++.|+.+. |+||+|+||+++|++........ .. ....+.....+..+..+|+|+|+.+++++++...
T Consensus 165 al~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 244 (265)
T PRK07097 165 GLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASN 244 (265)
T ss_pred HHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccC
Confidence 9999999999999988 99999999999999875432100 10 0111111223455788999999999999988655
Q ss_pred eE
Q 039397 263 YV 264 (349)
Q Consensus 263 ~i 264 (349)
++
T Consensus 245 ~~ 246 (265)
T PRK07097 245 FV 246 (265)
T ss_pred CC
Confidence 54
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=256.43 Aligned_cols=219 Identities=23% Similarity=0.240 Sum_probs=180.8
Q ss_pred CCCCCEEEEeCCCc-hHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cc
Q 039397 44 NMEDKVVIITGASS-DIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NK 106 (349)
Q Consensus 44 ~l~~k~vlVTGas~-GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~ 106 (349)
.+++|+++||||+| |||+++++.|+++|++|++++|+.+++++..+++.. +...+..+.+| .+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999985 999999999999999999999998888776665532 22457778888 23
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.+|++|++|||||......+.+. +.++|++++++|+.+++.++++++|.|+++ .|+||+++|..+..+.++...|++
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~ 172 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDM-TDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAA 172 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHH
Confidence 45899999999998776777775 458899999999999999999999999754 589999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+|+|+++++++++.|++++ |+||+|+||+++|++...... +. .........+..+..+|+|+|+.+++++++...+
T Consensus 173 sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~--~~-~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~ 249 (262)
T PRK07831 173 AKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS--AE-LLDELAAREAFGRAAEPWEVANVIAFLASDYSSY 249 (262)
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC--HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence 9999999999999999988 999999999999998654211 11 1111122345668889999999999999987777
Q ss_pred EEc
Q 039397 264 VKF 266 (349)
Q Consensus 264 i~~ 266 (349)
++.
T Consensus 250 itG 252 (262)
T PRK07831 250 LTG 252 (262)
T ss_pred cCC
Confidence 653
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=254.72 Aligned_cols=216 Identities=18% Similarity=0.135 Sum_probs=175.2
Q ss_pred CCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCc-----------chhhhHHHHhcCCCCeEEEEEec-----
Q 039397 43 ENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRE-----------NRLQGSTIDEYNPINEVTLVSLN----- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~-----------~~l~~~~~~~~~~~~~~~~~~~d----- 104 (349)
.+++||+++||||+ +|||+++|++|+++|++|++++|+. +++++...++...+..+..+.+|
T Consensus 2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND 81 (256)
T ss_pred CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 46899999999999 4999999999999999999986531 22333444444445567788888
Q ss_pred ---------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccccc
Q 039397 105 ---------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWL 174 (349)
Q Consensus 105 ---------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~ 174 (349)
.+..|++|++|||||.....++.+. +.++|++++++|+.|++.++++++|.|+++ +|+||++||.++..
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 160 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNL-TAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG 160 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence 3456889999999998776777775 568999999999999999999999999654 58999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHH
Q 039397 175 PLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLI 253 (349)
Q Consensus 175 ~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i 253 (349)
+.++...|+++|+|+++|+++++.|++++ |+||+|+||+++|++.... .........+..+..+|+|+|+.+
T Consensus 161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~-------~~~~~~~~~~~~~~~~~~d~a~~~ 233 (256)
T PRK12859 161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE-------IKQGLLPMFPFGRIGEPKDAARLI 233 (256)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH-------HHHHHHhcCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999988 9999999999999964321 011111222445678999999999
Q ss_pred HHHHhcCCceEEc
Q 039397 254 VSGACRGDTYVKF 266 (349)
Q Consensus 254 ~~l~~~~~~~i~~ 266 (349)
++++++...+++.
T Consensus 234 ~~l~s~~~~~~~G 246 (256)
T PRK12859 234 KFLASEEAEWITG 246 (256)
T ss_pred HHHhCccccCccC
Confidence 9999887666653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=254.57 Aligned_cols=221 Identities=19% Similarity=0.218 Sum_probs=170.3
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|..+|++|+++||||++|||++++++|+++|++|++++|++. .++...++...+.++..+.+| .+
T Consensus 2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK12823 2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVE 80 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence 556789999999999999999999999999999999999853 444444553334567777887 23
Q ss_pred cCCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.++++|++|||||... ..++.+. +.++|++.+++|+.+++++++.++|+|++++ |+||++||.++.. ++..+|++
T Consensus 81 ~~~~id~lv~nAg~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~ 157 (260)
T PRK12823 81 AFGRIDVLINNVGGTIWAKPFEEY-EEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSA 157 (260)
T ss_pred HcCCCeEEEECCccccCCCChhhC-ChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHH
Confidence 4578999999999653 3555555 4588999999999999999999999997654 8999999988752 35578999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcc-----ccccchh-hhh---HHHHhhhcCCCCHHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKF-----MLEDGAE-MQW---KEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~-----~~~~~~~-~~~---~~~~~~~~~~~~~edvA~~i~ 254 (349)
||+|+++|+++++.|++++ |+|++|+||+++|++..... ....... ..+ .....+..+..+|||+|++++
T Consensus 158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 237 (260)
T PRK12823 158 AKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAIL 237 (260)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHH
Confidence 9999999999999999888 99999999999998632110 0000000 000 111234567789999999999
Q ss_pred HHHhcCCceEE
Q 039397 255 SGACRGDTYVK 265 (349)
Q Consensus 255 ~l~~~~~~~i~ 265 (349)
+++++...+++
T Consensus 238 ~l~s~~~~~~~ 248 (260)
T PRK12823 238 FLASDEASYIT 248 (260)
T ss_pred HHcCccccccc
Confidence 99988766554
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=281.52 Aligned_cols=216 Identities=22% Similarity=0.237 Sum_probs=177.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
...||+++||||++|||+++|++|+++|++|++++|++++++++.+++ +.....+.+| .+++|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 347899999999999999999999999999999999988887766554 2345566777 34568
Q ss_pred CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+| +++|+||++||.++..+.++.+.|++||+|
T Consensus 343 ~id~li~nAg~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 420 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQ-SAEDFTRVYDVNLSGAFACARAAARLM-SQGGVIVNLGSIASLLALPPRNAYCASKAA 420 (520)
T ss_pred CCCEEEECCCCcCCCCChhhC-CHHHHHHHHHhCcHHHHHHHHHHHHHh-ccCCEEEEECchhhcCCCCCCchhHHHHHH
Confidence 99999999998643 455555 568999999999999999999999999 556899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++|+++|+.|++++ |+||+|+||+++|++.......... .........+..+..+|||+|+.+++++++...+++
T Consensus 421 l~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~ 497 (520)
T PRK06484 421 VTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRA-DFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVN 497 (520)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 999999999999988 9999999999999987643211111 111112233456778999999999999988766554
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=253.77 Aligned_cols=212 Identities=20% Similarity=0.232 Sum_probs=173.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+++++|+++||||++|||++++++|+++|++|++++|+.++ .. ....+..+.+| .+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------TV--DGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------hh--cCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999998754 11 12346667777 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+++|++|||||+.......+. +.++|++++++|+.+++.+++++.|.|.++ +|+||++||..+..+.++...|+++|
T Consensus 74 ~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 152 (252)
T PRK07856 74 GRLDVLVNNAGGSPYALAAEA-SPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK 152 (252)
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence 889999999998766666665 568899999999999999999999998653 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++++|+++++.|++++|+|++++||+++|++....... ...........+..+..+|||+|+.+++++++...+++
T Consensus 153 ~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~ 229 (252)
T PRK07856 153 AGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD--AEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVS 229 (252)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC--HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence 999999999999998779999999999999986543211 11111112233456788999999999999988766654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=253.60 Aligned_cols=219 Identities=20% Similarity=0.221 Sum_probs=181.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC--CCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d--------------~~ 106 (349)
.+++||+++||||++|||++++++|+++|++|++++|+.+.+++...++... +.++..+.+| .+
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999998888777666322 4567778888 24
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.++++|++|||||.....+..+. +.++|++++++|+.|++.++++++|+|+++ .|+||++||.++..+.++.+.|+++
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s 163 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDY-TEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMT 163 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHH
Confidence 46899999999998766666665 468899999999999999999999999754 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|++++.++++++.|+.++ |+||+++||+++|++........ . .........+..+..+|||+++++.+++++...++
T Consensus 164 K~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 241 (257)
T PRK09242 164 KAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDP-D-YYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYI 241 (257)
T ss_pred HHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCCh-H-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccc
Confidence 999999999999999887 99999999999999876532211 1 11111223345677899999999999998765444
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=253.87 Aligned_cols=218 Identities=19% Similarity=0.213 Sum_probs=178.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
+|+++||||++|||++++++|+++|++|++++|+.+.+++...++...+.++..+.+| .++++++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999999888877776664444567778888 23457899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
++|||||.....++.+. +.+++++++++|+.+++++++++++.|++. +|+||++||..+..+.++...|+++|++++
T Consensus 82 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (256)
T PRK08643 82 VVVNNAGVAPTTPIETI-TEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR 160 (256)
T ss_pred EEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence 99999998766666665 568899999999999999999999998654 379999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc---cchhhhh----HHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE---DGAEMQW----KEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
.+++.++.|+.++ |+||+|+||+++|++........ ......+ .....+.++..+|||+|+.+.+++++...
T Consensus 161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~ 240 (256)
T PRK08643 161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD 240 (256)
T ss_pred HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999999888 99999999999999876432110 0000011 11123456788999999999999998776
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 241 ~~~ 243 (256)
T PRK08643 241 YIT 243 (256)
T ss_pred Ccc
Confidence 654
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=250.66 Aligned_cols=200 Identities=19% Similarity=0.198 Sum_probs=162.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++...+.++..+.+| .+++
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 36889999999999999999999999999999999999999888877764444456667777 3455
Q ss_pred C-CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHH
Q 039397 109 K-AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 109 g-~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
| ++|++|||||.... .++.+. +.++|.+.+++|+.+++.+++.++|+|+++ +|+||++||..+. ++...|++
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~a 156 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQ-PSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVES 156 (227)
T ss_pred CCCCCEEEECCccCCCCCccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHH
Confidence 7 89999999986543 455554 568899999999999999999999999754 4899999997654 56788999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++|+.|++++ |+||+|+||+++|+.... ...|... .||++.+..++++ ..+
T Consensus 157 sKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~--------~~~~~~~---------~~~~~~~~~~l~~--~~~ 217 (227)
T PRK08862 157 SNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD--------AVHWAEI---------QDELIRNTEYIVA--NEY 217 (227)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC--------HHHHHHH---------HHHHHhheeEEEe--ccc
Confidence 9999999999999999988 999999999999983211 1112111 1899999999997 335
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 218 ~t 219 (227)
T PRK08862 218 FS 219 (227)
T ss_pred cc
Confidence 44
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=253.70 Aligned_cols=216 Identities=23% Similarity=0.198 Sum_probs=170.7
Q ss_pred EEEEeCCCchHHHHHHHHHHH----cCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cccC
Q 039397 49 VVIITGASSDIGEQIAYEYAK----RKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NKES 108 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~----~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~~~ 108 (349)
+++||||++|||+++|++|++ +|++|++++|++++++++.+++.. ....+..+.+| .+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 799999999999988888777743 24467778888 1223
Q ss_pred CC----cceeeecCcCCCCc--cccccCCcchHHHHHHhHhhhhHHHHHHhccccccC---CCeEEEEeccccccCCCCc
Q 039397 109 KA----VDHLVNTASLGHTF--FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES---NGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 109 g~----iDvlVnnAg~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---~g~IV~isS~~~~~~~~~~ 179 (349)
|. .|+||||||..... ...+.++.++|++++++|+.|+++++++++|.|+++ .|+||++||.++..+.++.
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~ 161 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW 161 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence 32 36999999975432 233333457899999999999999999999999754 3799999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc-cchhhhhHHHHhhhcCCCCHHHHHHHHHHHH
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE-DGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
..|++||+|+++|+++++.|++++ |+||+++||+++|++.+...... +...........+.++..+|||+|+.+++++
T Consensus 162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~ 241 (256)
T TIGR01500 162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLL 241 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999988 99999999999999875421110 1101111223445678899999999999999
Q ss_pred hcCCceEE
Q 039397 258 CRGDTYVK 265 (349)
Q Consensus 258 ~~~~~~i~ 265 (349)
++ .++++
T Consensus 242 ~~-~~~~~ 248 (256)
T TIGR01500 242 EK-DKFKS 248 (256)
T ss_pred hc-CCcCC
Confidence 74 34544
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=249.47 Aligned_cols=238 Identities=24% Similarity=0.288 Sum_probs=187.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
++|+++||||+||||++++++|+++|++|++++|+.++.+. ...+..+.+| .+.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~ 74 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI 74 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence 56899999999999999999999999999999998765432 1245667777 3456889
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|++|||||....+.+.+. +.+++++++++|+.|+++++++++|+|++++ |+||++||..+..+.|....|++||++++
T Consensus 75 d~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 153 (270)
T PRK06179 75 DVLVNNAGVGLAGAAEES-SIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE 153 (270)
T ss_pred CEEEECCCCCCCcCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence 999999999877777765 5688999999999999999999999997654 89999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch-hhh-----hH-HHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA-EMQ-----WK-EEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~-~~~-----~~-~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+++++++.|++++ |++++++||+++|++........... ... .. ..........+|+++|+.++++++++..
T Consensus 154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~ 233 (270)
T PRK06179 154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPWP 233 (270)
T ss_pred HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCCC
Confidence 9999999999888 99999999999999876532211110 000 00 0112234567899999999999988753
Q ss_pred -eEEcC-chHHHHHHHHHhchH-HHHHHHHHhc
Q 039397 263 -YVKFP-SWYDVFLLYRVFAPH-VLNWTFRLLI 292 (349)
Q Consensus 263 -~i~~p-~~~~~~~~~~~~~P~-~~~~~~~~l~ 292 (349)
..+.+ ++......+.+++|. +.+++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 266 (270)
T PRK06179 234 KMRYTAGGQASLLSKLRRFMPAGAVDKSLRKTF 266 (270)
T ss_pred CeeEecCchHHHHHHHHHHCcHHHHHHHHHHhc
Confidence 33333 455666777788894 6666766655
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=254.44 Aligned_cols=211 Identities=20% Similarity=0.158 Sum_probs=174.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-------hhhHHHHhcCCCCeEEEEEec-----------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-------LQGSTIDEYNPINEVTLVSLN----------- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-------l~~~~~~~~~~~~~~~~~~~d----------- 104 (349)
+++++|+++||||++|||.++|++|+++|++|++++|+.+. +++...++...+.++..+.+|
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 45789999999999999999999999999999999998653 334444443344567788888
Q ss_pred ---cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCC--CC
Q 039397 105 ---NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPL--PR 178 (349)
Q Consensus 105 ---~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~--~~ 178 (349)
.+.+|++|++|||||.....+..+. +.++|++++++|+.|++.++++++|+|+++ +|+||++||..+..+. ++
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 160 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDT-PMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAP 160 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccC-CHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCC
Confidence 2345789999999998777777665 568899999999999999999999999765 4899999999888776 88
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecC-cccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDE-VGITIATHG-WIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
.++|++||+|+++++++++.|++++ |+||+|+|| +++|++.+..... .....+..+|+++|+.++++
T Consensus 161 ~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~-----------~~~~~~~~~p~~va~~~~~l 229 (273)
T PRK08278 161 HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG-----------DEAMRRSRTPEIMADAAYEI 229 (273)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc-----------cccccccCCHHHHHHHHHHH
Confidence 8999999999999999999999988 999999999 6899865532110 11233578999999999999
Q ss_pred HhcCCceEE
Q 039397 257 ACRGDTYVK 265 (349)
Q Consensus 257 ~~~~~~~i~ 265 (349)
+++...+++
T Consensus 230 ~~~~~~~~~ 238 (273)
T PRK08278 230 LSRPAREFT 238 (273)
T ss_pred hcCccccce
Confidence 998766554
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=250.99 Aligned_cols=217 Identities=22% Similarity=0.277 Sum_probs=172.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
||+++||||++|||++++++|+++|++|++++|+.+++++...++......+..+.+| .+.++++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 6899999999999999999999999999999999888777766664334567788888 23457899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
++|||||.....++.+. +.++|++++++|+.|+++++++++|+|.++ +|+||++||..+..+.++...|++||+|++
T Consensus 81 ~lI~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~ 159 (252)
T PRK07677 81 ALINNAAGNFICPAEDL-SVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL 159 (252)
T ss_pred EEEECCCCCCCCCcccC-CHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence 99999997655566665 568899999999999999999999998643 489999999999988889999999999999
Q ss_pred HHHHHHHHHhcC-C-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 191 TFYESLRFELND-E-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 191 ~l~~~la~el~~-~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+.|+.+ + |+||+|+||+++|+.........+. .........+..+..+|||+|+++.+++++...+++
T Consensus 160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 235 (252)
T PRK07677 160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEE-AAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYIN 235 (252)
T ss_pred HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHH-HHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccC
Confidence 999999999975 4 9999999999996432211111111 111111122445788999999999999987655543
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=247.55 Aligned_cols=245 Identities=31% Similarity=0.415 Sum_probs=199.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g~iD 112 (349)
+|+++||||+||||++++++|+++|++|++++|+.++.++...++...+..+..+.+|. ++++++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999999999999999998877766666644445677778882 2357899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTF 192 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 192 (349)
++|||||......+.+..+.+++++.+++|+.+++.+++.+.|+|.++.|+||++||..+..+.++...|+++|++++++
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~ 160 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGF 160 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHH
Confidence 99999998777666665356889999999999999999999999977779999999999999999999999999999999
Q ss_pred HHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcCchHH
Q 039397 193 YESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYD 271 (349)
Q Consensus 193 ~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p~~~~ 271 (349)
+++++.|+... ++++++.||+++|++.......... . ...........++|+|+|+.++++++++...+..+.+..
T Consensus 161 ~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~dva~~i~~~~~~~~~~~~~~~~~~ 237 (263)
T PRK06181 161 FDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGK-P--LGKSPMQESKIMSAEECAEAILPAIARRKRLLVMSLRGR 237 (263)
T ss_pred HHHHHHHhhhcCceEEEEecCccccCcchhhcccccc-c--cccccccccCCCCHHHHHHHHHHHhhCCCCEEecCchHH
Confidence 99999999887 9999999999999987643221111 0 000001113678999999999999999999998887666
Q ss_pred HHHHHHHhchHHHHHHHHHhccc
Q 039397 272 VFLLYRVFAPHVLNWTFRLLISS 294 (349)
Q Consensus 272 ~~~~~~~~~P~~~~~~~~~l~~~ 294 (349)
....+++..|.+++.+.+...+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~ 260 (263)
T PRK06181 238 LGRWLKLIAPGLVDKIARKAIAS 260 (263)
T ss_pred HHHHHHHHCHHHHHHHHHHhhhc
Confidence 66678888898887766655443
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=251.16 Aligned_cols=221 Identities=21% Similarity=0.169 Sum_probs=176.8
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|..+|+||+++||||++|||+++|++|+++|++|++++|+++.. +..+++...+..+..+.+| .+
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999998776 5555554444567788888 23
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
.++++|++|||||......+.+ ++ ++|++.+++|+.+++.+++.++|.|++++|+||++||..+..+.++...|++||
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~-~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 157 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEA-GR-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAK 157 (258)
T ss_pred hcCCCCEEEECCcccCCCcccC-CH-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHH
Confidence 4578999999999765544444 34 889999999999999999999999977779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhH--HHHhhh-cCCCCHHHHHHHHHHHHhcCCc
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWK--EEREVH-VAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+++++++++++.|+.++ |+|++|+||.++|++................ ....+. .+..+|+|+|+.+++++++...
T Consensus 158 ~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 237 (258)
T PRK08628 158 GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSS 237 (258)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhc
Confidence 99999999999999887 9999999999999976532211111011111 111122 3678999999999999988654
Q ss_pred eE
Q 039397 263 YV 264 (349)
Q Consensus 263 ~i 264 (349)
++
T Consensus 238 ~~ 239 (258)
T PRK08628 238 HT 239 (258)
T ss_pred cc
Confidence 44
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=279.86 Aligned_cols=237 Identities=25% Similarity=0.246 Sum_probs=197.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+++||+++||||++|||++++++|+++|++|++++|+++++++...++...+.++..+.+| .+.+
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 36789999999999999999999999999999999999988888777764445567788888 2446
Q ss_pred CCcceeeecCcCCCCccccccC-CcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVT-DTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|++|||||......+.+.. +.+++++++++|+.|+++++++++|+|++++ |+||++||.++..+.++.+.|++||
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 526 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASK 526 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHH
Confidence 8899999999986555444322 2467999999999999999999999997654 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++++.|++++ |+||+|+||+++|++....... ......+||++|+.++..+.++...+.
T Consensus 527 ~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~-------------~~~~~~~~~~~a~~i~~~~~~~~~~~~ 593 (657)
T PRK07201 527 AALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY-------------NNVPTISPEEAADMVVRAIVEKPKRID 593 (657)
T ss_pred HHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc-------------cCCCCCCHHHHHHHHHHHHHhCCcEEe
Confidence 99999999999999887 9999999999999987532100 112467999999999999988777777
Q ss_pred cCchHHHHHHHHHhchHHHHHHHHHhcc
Q 039397 266 FPSWYDVFLLYRVFAPHVLNWTFRLLIS 293 (349)
Q Consensus 266 ~p~~~~~~~~~~~~~P~~~~~~~~~l~~ 293 (349)
.|. ......+..++|.+.+++..+...
T Consensus 594 ~~~-~~~~~~~~~~~p~~~~~~~~~~~~ 620 (657)
T PRK07201 594 TPL-GTFAEVGHALAPRLARRILHQLYL 620 (657)
T ss_pred ccH-HHHHHHHHHHCHHHHHHHHHHHHh
Confidence 774 566677888999988887776543
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=250.12 Aligned_cols=221 Identities=18% Similarity=0.242 Sum_probs=183.4
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+.++++|+++||||++|||++++++|+++|++|++++|+++++++...++...+.+...+.+| .+.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 446889999999999999999999999999999999999888877776664444457788888 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
++++|++|||||.....++.+. +.++|++++++|+.+++.+++++++.|.++ .|+||++||..+..+.++..+|+++|
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 164 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAEL-DDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAK 164 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHH
Confidence 6889999999998777677765 458899999999999999999999999654 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|++++++.++.|+++. |+|++|+||+++|++........ . .........+..+..+|+|+++++++++++...+++
T Consensus 165 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~ 242 (256)
T PRK06124 165 QGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADP-A-VGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVN 242 (256)
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccCh-H-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcC
Confidence 99999999999999887 99999999999999865432111 1 111122233456788999999999999998766654
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=258.05 Aligned_cols=206 Identities=24% Similarity=0.298 Sum_probs=171.7
Q ss_pred CCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEec--------------cccC-CCcceee
Q 039397 54 GAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLN--------------NKES-KAVDHLV 115 (349)
Q Consensus 54 Gas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d--------------~~~~-g~iDvlV 115 (349)
|++ +|||+++|++|+++|++|++++|+.+++++..+++. ..... ++.+| .+.+ |++|+||
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 666 999999999999999999999999998655555542 22223 47888 4556 9999999
Q ss_pred ecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 116 NTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 116 nnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
||+|.... .++.+. +.++|++.+++|+.+++.++|+++|+|++ +|+||++||.++..+.++...|+++|+|+++
T Consensus 79 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gsii~iss~~~~~~~~~~~~y~~sKaal~~ 156 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDL-SEEDWDKTFDINVFSPFLLAQAALPLMKK-GGSIINISSIAAQRPMPGYSAYSASKAALEG 156 (241)
T ss_dssp EEEESCTGGGTSSSGGGS-HHHHHHHHHHHHTHHHHHHHHHHHHHHHH-EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred ecccccccccCCCChHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCcccccchhhcccCccchhhHHHHHHHHH
Confidence 99998776 566665 56899999999999999999999997754 5899999999999999999999999999999
Q ss_pred HHHHHHHHhcC-C-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 192 FYESLRFELND-E-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 192 l~~~la~el~~-~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++++|+.||++ + ||||+|+||+++|++.+.... .+...+......+.++..+|||||+++++|+++..++|+
T Consensus 157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~--~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~it 230 (241)
T PF13561_consen 157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG--NEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYIT 230 (241)
T ss_dssp HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT--HHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGT
T ss_pred HHHHHHHHhccccCeeeeeecccceeccchhcccc--ccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCcc
Confidence 99999999999 7 999999999999998543211 111233345566778888999999999999999877765
|
... |
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=247.77 Aligned_cols=238 Identities=24% Similarity=0.310 Sum_probs=186.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcce
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDH 113 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDv 113 (349)
|+++||||+||||++++++|+++|++|++++|+.+++++.... ....+.+| .+.++++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA------GFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC------CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 7899999999999999999999999999999998776544321 24456666 234578999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFY 193 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~ 193 (349)
+|||||....+++.+. +.+++++.+++|+.|++.++++++|.|+++.|+||++||.++..+.+....|++||+++++++
T Consensus 76 vi~~ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~ 154 (274)
T PRK05693 76 LINNAGYGAMGPLLDG-GVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALS 154 (274)
T ss_pred EEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHH
Confidence 9999998877777665 568999999999999999999999999777799999999999999999999999999999999
Q ss_pred HHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc---hhhhhH---H-H----HhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 194 ESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG---AEMQWK---E-E----REVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 194 ~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~---~-~----~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++++.|++++ |+|++++||+++|++.+........ ....+. . . ........+|+++|+.++.++.++.
T Consensus 155 ~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~ 234 (274)
T PRK05693 155 DALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQSP 234 (274)
T ss_pred HHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999887 9999999999999987653211110 000010 0 0 0111235689999999999998765
Q ss_pred c--eEEcCchHHHHHHHHHhchH-HHHHHHHHhc
Q 039397 262 T--YVKFPSWYDVFLLYRVFAPH-VLNWTFRLLI 292 (349)
Q Consensus 262 ~--~i~~p~~~~~~~~~~~~~P~-~~~~~~~~l~ 292 (349)
. .+..+........+.+++|. ++++..++.+
T Consensus 235 ~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~ 268 (274)
T PRK05693 235 RPRLVRLGNGSRALPLLARLLPRGLLDRVLRKRF 268 (274)
T ss_pred CCceEEecCchHHHHHHHHHCcHHHHHHHHHHhc
Confidence 3 44455555666678888894 6677666544
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=249.33 Aligned_cols=218 Identities=20% Similarity=0.201 Sum_probs=177.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||++|||++++++|+++|++|++++|+.+..+....++...+.+...+.+| .+..
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999999888777666664444467777888 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||.....++ +. +.++|++.+++|+.|+++++++++|+|.+. +|+||++||.++..+.++...|+++|+
T Consensus 87 ~~~d~li~~ag~~~~~~~-~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 164 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPF-DM-PMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA 164 (255)
T ss_pred CCCCEEEECCCCCCCCCC-CC-CHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHH
Confidence 789999999998665544 33 458899999999999999999999999654 479999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++++++++.|+.++ |+||+++||+++|++....... . .........+..+..+|||+|+++++++++...+++
T Consensus 165 a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~ 240 (255)
T PRK06113 165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP--E-IEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS 240 (255)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCH--H-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence 9999999999999888 9999999999999987643211 1 111111223345678999999999999987655543
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=250.46 Aligned_cols=218 Identities=21% Similarity=0.254 Sum_probs=177.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
.+++|+++||||++|||+++|++|+++|++|++++|+.+.+++...++. ..+..+.+| .+.++
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---PAAIAVSLDVTRQDSIDRIVAAAVERFG 79 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999999988777665542 246667777 23467
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++|++|||||.....++.+. +.+++++++++|+.+++.+++++++.|.++ +|+||++||..+..+.++...|++||+
T Consensus 80 ~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 158 (257)
T PRK07067 80 GIDILFNNAALFDMAPILDI-SRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKA 158 (257)
T ss_pred CCCEEEECCCcCCCCCcccC-CHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHH
Confidence 89999999998776666665 468899999999999999999999998654 479999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc---c----cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML---E----DGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
++++++++++.|+.++ |+||+++||+++|++.+..... . ............+.++..+|||+|+++++++++
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 238 (257)
T PRK07067 159 AVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASA 238 (257)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCc
Confidence 9999999999999888 9999999999999986532100 0 000011111223566788999999999999998
Q ss_pred CCceEE
Q 039397 260 GDTYVK 265 (349)
Q Consensus 260 ~~~~i~ 265 (349)
...+++
T Consensus 239 ~~~~~~ 244 (257)
T PRK07067 239 DADYIV 244 (257)
T ss_pred cccccc
Confidence 766553
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=257.13 Aligned_cols=216 Identities=17% Similarity=0.130 Sum_probs=175.1
Q ss_pred ccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEec-------------
Q 039397 39 NFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLN------------- 104 (349)
Q Consensus 39 ~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d------------- 104 (349)
+.|+.+++||+++||||++|||+++|++|+++|++|++++++. +..++..+++...+..+..+.+|
T Consensus 4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred ccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999864 45555666664445577788888
Q ss_pred -cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--------CCeEEEEeccccccC
Q 039397 105 -NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--------NGRVVVNASVENWLP 175 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--------~g~IV~isS~~~~~~ 175 (349)
.+ +|++|+||||||+.....+.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+
T Consensus 84 ~~~-~g~iD~li~nAG~~~~~~~~~~-~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 161 (306)
T PRK07792 84 AVG-LGGLDIVVNNAGITRDRMLFNM-SDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG 161 (306)
T ss_pred HHH-hCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC
Confidence 23 6899999999999877767666 458899999999999999999999998642 279999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHH
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~ 254 (349)
.++.+.|+++|+|+++|+++++.|+.++ |+||+|+|| ..|+|.......... .........+||++|+.+.
T Consensus 162 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~-------~~~~~~~~~~pe~va~~v~ 233 (306)
T PRK07792 162 PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPD-------VEAGGIDPLSPEHVVPLVQ 233 (306)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccch-------hhhhccCCCCHHHHHHHHH
Confidence 9999999999999999999999999888 999999999 488886543211110 0011123468999999999
Q ss_pred HHHhcCCceE
Q 039397 255 SGACRGDTYV 264 (349)
Q Consensus 255 ~l~~~~~~~i 264 (349)
+++++...++
T Consensus 234 ~L~s~~~~~~ 243 (306)
T PRK07792 234 FLASPAAAEV 243 (306)
T ss_pred HHcCccccCC
Confidence 9998765443
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=248.68 Aligned_cols=216 Identities=21% Similarity=0.276 Sum_probs=174.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
..++||+++||||++|||+++|++|+++|++|++++|+.++.++...++ ...+.++.+| .+++
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF 82 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3678999999999999999999999999999999999877666544433 2356677887 2345
Q ss_pred CCcceeeecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|++|||||.... .++.+. +.++|++++++|+.+++.+++++.|+|++++|+||++||..+..+.++...|+++|
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sK 161 (255)
T PRK05717 83 GRLDALVCNAAIADPHNTTLESL-SLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASK 161 (255)
T ss_pred CCCCEEEECCCcccCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHH
Confidence 789999999998643 344443 56889999999999999999999999977779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++++++++.|++..|+|++++||+++|++...... .. .........+..+..+|+|+|+.+.+++++...+++
T Consensus 162 aa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 237 (255)
T PRK05717 162 GGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA--EP-LSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVT 237 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc--hH-HHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence 99999999999999867999999999999997543211 00 001111233456788999999999999987654443
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=251.09 Aligned_cols=220 Identities=19% Similarity=0.219 Sum_probs=176.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
++++++|+++||||++|||.+++++|+++|++|++++|+.+++++...++.....+..++.+| .+.
T Consensus 4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999887776655553333455677777 233
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++++|++|||||.....++.+. +.++|++++++|+.|+++++++++|+|++++|+||++||.++..+.++...|+++|+
T Consensus 84 ~~~iD~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~ 162 (264)
T PRK07576 84 FGPIDVLVSGAAGNFPAPAAGM-SANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKA 162 (264)
T ss_pred cCCCCEEEECCCCCCCCccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHH
Confidence 5789999999997766666664 568899999999999999999999999777799999999999889999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCccc-CCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIG-IEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+++|+++++.|+.++ |+|++++||+++ |+....... .......+ ....+..+..+|+|+|+.+++++++...++
T Consensus 163 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 239 (264)
T PRK07576 163 GVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAP-SPELQAAV-AQSVPLKRNGTKQDIANAALFLASDMASYI 239 (264)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhccc-CHHHHHHH-HhcCCCCCCCCHHHHHHHHHHHcChhhcCc
Confidence 9999999999999888 999999999997 553332211 11101111 112345567899999999999998755443
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=243.93 Aligned_cols=239 Identities=19% Similarity=0.211 Sum_probs=194.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------cc-CCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KE-SKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~-~g~iD 112 (349)
|+++||||+||||++++++|+++|++|++++|+.+.+++...++. +..+.++.+|. ++ .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 789999999999999999999999999999999988877766543 34577778881 11 67899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
++|||||......+.+. +.+++++++++|+.+++.+++++.+.|+++ +|+||++||..+..+.++...|++||+++++
T Consensus 80 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 158 (260)
T PRK08267 80 VLFNNAGILRGGPFEDI-PLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRG 158 (260)
T ss_pred EEEECCCCCCCCccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence 99999999877766665 468899999999999999999999999755 5899999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC-ceEEcCch
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD-TYVKFPSW 269 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~-~~i~~p~~ 269 (349)
++++++.|+.++ |++++++||+++|++..... .. .. ...........+|+++|++++.++.++. ..+..+..
T Consensus 159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~--~~-~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~~~~~~ 232 (260)
T PRK08267 159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS---NE--VD-AGSTKRLGVRLTPEDVAEAVWAAVQHPTRLHWPVGKQ 232 (260)
T ss_pred HHHHHHHHhcccCcEEEEEecCCcCCccccccc---ch--hh-hhhHhhccCCCCHHHHHHHHHHHHhCCCccEEeeChH
Confidence 999999999888 99999999999999876411 00 00 0111112345788999999999997654 34455666
Q ss_pred HHHHHHHHHhchHHHHHHHHHhcccc
Q 039397 270 YDVFLLYRVFAPHVLNWTFRLLISSE 295 (349)
Q Consensus 270 ~~~~~~~~~~~P~~~~~~~~~l~~~~ 295 (349)
.........++|..+.+..++.+...
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (260)
T PRK08267 233 AKLLAFLARLSPGFVRRLINKSLARP 258 (260)
T ss_pred HHHHHHHHHHChHHHHHHHHHHhcCC
Confidence 77777888888988888888766543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=243.45 Aligned_cols=222 Identities=24% Similarity=0.230 Sum_probs=187.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEecccc-----------CCCcceee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLNNKE-----------SKAVDHLV 115 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d~~~-----------~g~iDvlV 115 (349)
|+++||||++|||.+++++|+++|++|++++|++++.++...++. ....++.++++|..+ ..++|++|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 689999999999999999999999999999999888776665552 234467888888322 23579999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHHHHHH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYE 194 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~ 194 (349)
||||........+. +.+++.+++++|+.+++++++++.|.|.++ .|+||++||..+..+.++...|+++|++++++++
T Consensus 82 ~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 160 (243)
T PRK07102 82 IAVGTLGDQAACEA-DPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS 160 (243)
T ss_pred ECCcCCCCcccccC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence 99998766655554 568889999999999999999999999754 4899999999999999999999999999999999
Q ss_pred HHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcCchHHHH
Q 039397 195 SLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVF 273 (349)
Q Consensus 195 ~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p~~~~~~ 273 (349)
+++.|+.+. |+|++++||+++|++..... .+.....+|+++|+.+++++++++..++.|+..+.+
T Consensus 161 ~l~~el~~~gi~v~~v~pg~v~t~~~~~~~--------------~~~~~~~~~~~~a~~i~~~~~~~~~~i~~~~~~~~~ 226 (243)
T PRK07102 161 GLRNRLFKSGVHVLTVKPGFVRTPMTAGLK--------------LPGPLTAQPEEVAKDIFRAIEKGKDVIYTPWFWRLI 226 (243)
T ss_pred HHHHHhhccCcEEEEEecCcccChhhhccC--------------CCccccCCHHHHHHHHHHHHhCCCCEEEcCchHHHH
Confidence 999999887 99999999999999765321 011246789999999999999999999999888888
Q ss_pred HHHHHhchHHH
Q 039397 274 LLYRVFAPHVL 284 (349)
Q Consensus 274 ~~~~~~~P~~~ 284 (349)
..+.+++|..+
T Consensus 227 ~~~~~~~p~~~ 237 (243)
T PRK07102 227 MLIIRSIPEPI 237 (243)
T ss_pred HHHHHhCCHHH
Confidence 88888888644
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-32 Score=241.41 Aligned_cols=215 Identities=22% Similarity=0.315 Sum_probs=177.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-----------ccCCCcceeee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-----------KESKAVDHLVN 116 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-----------~~~g~iDvlVn 116 (349)
|+++||||+||||++++++|+++|++|++++|+++++++.... ...+..+.+|. +....+|++||
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 7899999999999999999999999999999998777655433 23466778872 11134799999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESL 196 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~l 196 (349)
|||........+. +.++|++++++|+.|+++++++++|+|.+ +++||++||.++..+.++...|+++|++++++++++
T Consensus 78 ~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 155 (240)
T PRK06101 78 NAGDCEYMDDGKV-DATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTL 155 (240)
T ss_pred cCcccccCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHH
Confidence 9997543333333 45789999999999999999999999954 578999999999999999999999999999999999
Q ss_pred HHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcCchHHHHHH
Q 039397 197 RFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSWYDVFLL 275 (349)
Q Consensus 197 a~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p~~~~~~~~ 275 (349)
+.|+..+ |++++++||+++|++.+.... ......+|+++|+.++..++++...+..|.++..+..
T Consensus 156 ~~e~~~~gi~v~~v~pg~i~t~~~~~~~~--------------~~~~~~~~~~~a~~i~~~i~~~~~~~~~~~~~~~~~~ 221 (240)
T PRK06101 156 QLDLRPKGIEVVTVFPGFVATPLTDKNTF--------------AMPMIITVEQASQEIRAQLARGKSHIYFPARFTWLIR 221 (240)
T ss_pred HHHHHhcCceEEEEeCCcCCCCCcCCCCC--------------CCCcccCHHHHHHHHHHHHhcCCCEEEcChhHHHHHH
Confidence 9999888 999999999999998654210 0113478999999999999999999988877766666
Q ss_pred HHHhchH
Q 039397 276 YRVFAPH 282 (349)
Q Consensus 276 ~~~~~P~ 282 (349)
..+++|.
T Consensus 222 ~~~~~p~ 228 (240)
T PRK06101 222 LLGLLPY 228 (240)
T ss_pred HHHhCcH
Confidence 6677775
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=247.53 Aligned_cols=217 Identities=20% Similarity=0.180 Sum_probs=176.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||++|||.++|++|+++|++|++++|+.+.. +...++. ......+.+| .+.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 367899999999999999999999999999999999987643 2233332 2345567777 2335
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||.....++.+. +.+++++++++|+.|++++++++.|.|+++ .|+||++||..+..+.+....|+++|+
T Consensus 88 ~~~d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 166 (255)
T PRK06841 88 GRIDILVNSAGVALLAPAEDV-SEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA 166 (255)
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence 789999999998776666654 568899999999999999999999998764 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
|+++++++++.|++++ |+||+|+||+++|++........ .........+..+..+|+|+|+.+++++++...+++.
T Consensus 167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G 243 (255)
T PRK06841 167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGE---KGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITG 243 (255)
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchh---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence 9999999999999988 99999999999999876432111 1111122334567889999999999999987766543
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=247.88 Aligned_cols=219 Identities=21% Similarity=0.200 Sum_probs=177.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||++|||++++++|+++|++|++++|+.+++++...++......+.++.+| .+.+
T Consensus 6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999999888777766664444567777888 2335
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+++|++|||||......+.+. +.+++++++++|+.+++.+++++.|+|.+ ..|+||++||.++..+.++...|++||
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 164 (263)
T PRK07814 86 GRLDIVVNNVGGTMPNPLLST-STKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK 164 (263)
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence 789999999998766666665 46889999999999999999999999965 348999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+++++++++++.|+.+.|++++|+||+++|++...... ............+..+..+|||+|+.+++++++...++
T Consensus 165 ~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 240 (263)
T PRK07814 165 AALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA--NDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYL 240 (263)
T ss_pred HHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 99999999999999877999999999999997643211 11011111112234566799999999999998755443
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-32 Score=241.74 Aligned_cols=220 Identities=24% Similarity=0.301 Sum_probs=185.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cccCCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~~~g~ 110 (349)
+|+++||||++|||++++++|+++|++|++++|+.+++++...++.. .+..+..+.+| .+.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999999888777665532 24567788888 234578
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCC-chhhHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPR-MSLYASAKAA 188 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~-~~~Y~asKaa 188 (349)
+|++|||||+.......+. +.+.+++.+++|+.++++++++++|.|++. .++||++||..+..+.++ ...|++||++
T Consensus 82 id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a 160 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTG-KFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG 160 (248)
T ss_pred CCEEEECCCcCCCCCcCcC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence 9999999999877666654 457889999999999999999999998654 489999999999888875 6899999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcC
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFP 267 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p 267 (349)
++++++.++.|+... |++++++||+++|++...... .....+++++|+.++.+++++...+..|
T Consensus 161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---------------~~~~~~~~~~a~~i~~~~~~~~~~~~~~ 225 (248)
T PRK08251 161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS---------------TPFMVDTETGVKALVKAIEKEPGRAAVP 225 (248)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc---------------CCccCCHHHHHHHHHHHHhcCCCeEEcC
Confidence 999999999999877 999999999999998764210 1246789999999999999998888888
Q ss_pred ch-HHHHHHHHHhchH
Q 039397 268 SW-YDVFLLYRVFAPH 282 (349)
Q Consensus 268 ~~-~~~~~~~~~~~P~ 282 (349)
.| +..+..+.+++|.
T Consensus 226 ~~~~~~~~~~~~~~p~ 241 (248)
T PRK08251 226 WWPWAPLGALMRVLPL 241 (248)
T ss_pred cchHHHHHHHHHHCcH
Confidence 65 5566667777785
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=238.01 Aligned_cols=209 Identities=21% Similarity=0.253 Sum_probs=168.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHH-hcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID-EYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~-~~~~~~~~~~~~~d--------------~~~ 107 (349)
++++||.|++||+.||||++++++|+++|..+.++.-+.+..+..++- ...+...+.+++|| ...
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~ 80 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT 80 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence 368899999999999999999999999999998888887776654432 25567789999999 467
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCCchhhH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+|.+|++|||||+. +..+|++.+++|+.|.++.+..++|+|.++ +|-|||+||+.|..|.|-.+.|+
T Consensus 81 fg~iDIlINgAGi~---------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~ 151 (261)
T KOG4169|consen 81 FGTIDILINGAGIL---------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYA 151 (261)
T ss_pred hCceEEEEcccccc---------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhh
Confidence 89999999999996 336799999999999999999999999543 27899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc--CC-eeEEEEecCcccCCCCCCcccccc--chhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 184 SAKAALVTFYESLRFELN--DE-VGITIATHGWIGIEMTKGKFMLED--GAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 184 asKaal~~l~~~la~el~--~~-I~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
|||+++.+|+|+|+.+.- .. |+++++|||+++|++......... +......+.. ......+|+++|..++.+++
T Consensus 152 AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l-~~~~~q~~~~~a~~~v~aiE 230 (261)
T KOG4169|consen 152 ASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEAL-ERAPKQSPACCAINIVNAIE 230 (261)
T ss_pred hcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHH-HHcccCCHHHHHHHHHHHHh
Confidence 999999999999987753 33 999999999999998765421100 0011111111 12246678999999999998
Q ss_pred cCC
Q 039397 259 RGD 261 (349)
Q Consensus 259 ~~~ 261 (349)
...
T Consensus 231 ~~~ 233 (261)
T KOG4169|consen 231 YPK 233 (261)
T ss_pred hcc
Confidence 754
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=243.38 Aligned_cols=211 Identities=21% Similarity=0.229 Sum_probs=168.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcCCCCeEEEEEec----------cccCCCcc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVD 112 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iD 112 (349)
++++|+++||||+||||++++++|+++|++|++++|+ +++.+++..+. ....+.+| .++.+++|
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~id 77 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRKSGALD 77 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHHhCCCc
Confidence 5789999999999999999999999999999988764 44444443332 12344555 23457899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-cCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-LPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-~~~~~~~~Y~asKaal~~ 191 (349)
++|||||........+. +.++|++++++|+.|++.++++++++|+ .+|+||++||..+. .+.++...|+++|+++++
T Consensus 78 ~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~ 155 (237)
T PRK12742 78 ILVVNAGIAVFGDALEL-DADDIDRLFKINIHAPYHASVEAARQMP-EGGRIIIIGSVNGDRMPVAGMAAYAASKSALQG 155 (237)
T ss_pred EEEECCCCCCCCCcccC-CHHHHHHHHhHHHHHHHHHHHHHHHHHh-cCCeEEEEeccccccCCCCCCcchHHhHHHHHH
Confidence 99999998766666665 4688999999999999999999999985 35899999999884 577889999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
++++++.|++++ |+||+|+||+++|++..... . ..+......+..+..+|+|+|+.+.+++++...+++.
T Consensus 156 ~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~----~-~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G 226 (237)
T PRK12742 156 MARGLARDFGPRGITINVVQPGPIDTDANPANG----P-MKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTG 226 (237)
T ss_pred HHHHHHHHHhhhCeEEEEEecCcccCCcccccc----H-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccC
Confidence 999999999888 99999999999999865321 0 1111112234567889999999999999987776653
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=248.32 Aligned_cols=220 Identities=22% Similarity=0.233 Sum_probs=176.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
.+++|+++||||++|||+++|++|+++|++|++++|+++++++...++...+.++..+.+| .+.++
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999999888777766664334456777887 23458
Q ss_pred CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||.... .++.+. +.++|++++++|+.|++.+++++.+.|++++|+||++||..+..+.++...|+++|++
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a 160 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADA-DFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGA 160 (258)
T ss_pred CccEEEECCccCCCCCCcccC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHH
Confidence 89999999998644 444454 5689999999999999999999999997777899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc------cchh-hhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE------DGAE-MQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++.++++++.|++++ |++++++||++.|++........ .... ........+..+..+|||+|+++++++++.
T Consensus 161 ~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~ 240 (258)
T PRK07890 161 LLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDL 240 (258)
T ss_pred HHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHh
Confidence 999999999999887 99999999999999754322110 0000 000011234456788999999999999865
Q ss_pred CceE
Q 039397 261 DTYV 264 (349)
Q Consensus 261 ~~~i 264 (349)
..++
T Consensus 241 ~~~~ 244 (258)
T PRK07890 241 ARAI 244 (258)
T ss_pred hhCc
Confidence 4444
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=243.13 Aligned_cols=200 Identities=14% Similarity=0.084 Sum_probs=160.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
+|+++||||++|||+++|++|+++|++|++++|++++..+...+ . .+..+.+| .+.++++|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ---A--GAQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---c--CCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 57999999999999999999999999999999987654322211 1 24556677 23467899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC---CeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN---GRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|||||........+. +.++|++++++|+.+++.+++.++|.|++++ |+||++||..+..+.++...|++||+|+
T Consensus 77 ~lv~~ag~~~~~~~~~~-~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal 155 (236)
T PRK06483 77 AIIHNASDWLAEKPGAP-LADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL 155 (236)
T ss_pred EEEECCccccCCCcCcc-CHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence 99999998655555554 4689999999999999999999999997643 7999999999998999999999999999
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
++|+++++.|++++|+||+|+||++.|+.... +. .........+..+...|||+|+.+.++++
T Consensus 156 ~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 218 (236)
T PRK06483 156 DNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-----AA-YRQKALAKSLLKIEPGEEEIIDLVDYLLT 218 (236)
T ss_pred HHHHHHHHHHHCCCcEEEEEccCceecCCCCC-----HH-HHHHHhccCccccCCCHHHHHHHHHHHhc
Confidence 99999999999877999999999998764211 11 11111122345577899999999999996
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=248.08 Aligned_cols=221 Identities=23% Similarity=0.241 Sum_probs=174.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||++|||++++++|+++|++|++++|+++ ..+...++.....++..+.+| .+++
T Consensus 2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999999875 333333333233456777888 2346
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccc-ccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVEN-WLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~-~~~~~~~~~Y~asK 186 (349)
+++|++|||||.....++.+. +.+++++++++|+.+++.++++++|+|+++ .++||++||..+ ..+.++...|+++|
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK 159 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDM-SDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK 159 (263)
T ss_pred CCCCEEEECCCcCCCCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence 889999999998777777665 458899999999999999999999998654 489999999887 46678889999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccccc---ch-hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLED---GA-EMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+++++++++++.|+.++ |+|++++||+++|++......... .. .........+..+..+|||+|+.+++++++..
T Consensus 160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~ 239 (263)
T PRK08226 160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDES 239 (263)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchh
Confidence 99999999999999887 999999999999998764321110 00 01111122345567899999999999998766
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
.+++
T Consensus 240 ~~~~ 243 (263)
T PRK08226 240 SYLT 243 (263)
T ss_pred cCCc
Confidence 6554
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=250.63 Aligned_cols=213 Identities=22% Similarity=0.251 Sum_probs=169.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|++|+++||||++|||++++++|+++|++|++++|++++.+. ..+..+.+| .+.++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---------ENYQFVPTDVSSAEEVNHTVAEIIEKFG 76 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999998765431 245566666 23468
Q ss_pred CcceeeecCcCCCCccc---------cccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCc
Q 039397 110 AVDHLVNTASLGHTFFF---------EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~---------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~ 179 (349)
++|++|||||......+ .+. +.++|++++++|+.+++.+++++.|+|+++ .|+||++||..+..+.++.
T Consensus 77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 155 (266)
T PRK06171 77 RIDGLVNNAGINIPRLLVDEKDPAGKYEL-NEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQ 155 (266)
T ss_pred CCCEEEECCcccCCccccccccccccccC-CHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCC
Confidence 99999999998644322 233 458899999999999999999999999754 4899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCccc-CCCCCCcccc----ccc-hhhhh-H--HH--HhhhcCCCCHH
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIG-IEMTKGKFML----EDG-AEMQW-K--EE--REVHVAGGPVE 247 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~-T~~~~~~~~~----~~~-~~~~~-~--~~--~~~~~~~~~~e 247 (349)
..|+++|+|+++++++++.|++++ |+||+|+||+++ |++....... ... ..... . .. ..+..+..+||
T Consensus 156 ~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 235 (266)
T PRK06171 156 SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLS 235 (266)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHH
Confidence 999999999999999999999988 999999999997 6654321110 000 00010 1 11 34567889999
Q ss_pred HHHHHHHHHHhcCCceEEc
Q 039397 248 DFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 248 dvA~~i~~l~~~~~~~i~~ 266 (349)
|+|+++.+++++..++++.
T Consensus 236 eva~~~~fl~s~~~~~itG 254 (266)
T PRK06171 236 EVADLVCYLLSDRASYITG 254 (266)
T ss_pred Hhhhheeeeecccccccee
Confidence 9999999999988777763
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=245.46 Aligned_cols=213 Identities=20% Similarity=0.224 Sum_probs=173.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
+|+++||||++|||++++++|+++|++|+++++ +.+.++...+++...+.++..+.+| .+.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999999875 4455555555654445577888888 2345789
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
|++|||||......+.+. +.++|++++++|+.+++++++++.++|.++ +|+||++||..+..+.++...|+++|+++
T Consensus 82 d~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 160 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDM-DFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL 160 (256)
T ss_pred CEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence 999999998776666665 568999999999999999999999999654 48999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
++++++++.|+.++ |+||+|+||+++|++..... ...........+..+..+|||+|+++.+++++...++
T Consensus 161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 232 (256)
T PRK12743 161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD----SDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYT 232 (256)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC----hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCc
Confidence 99999999999988 99999999999999865321 1111111222344577899999999999998765443
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=247.06 Aligned_cols=214 Identities=23% Similarity=0.221 Sum_probs=169.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
..+++||+++||||++|||++++++|+++|++|++++|++++.. ...+..+.+| .+.
T Consensus 4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL---------PEGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc---------CCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999865321 1245667777 244
Q ss_pred CCCcceeeecCcCCC--CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCC-CchhhH
Q 039397 108 SKAVDHLVNTASLGH--TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLP-RMSLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~-~~~~Y~ 183 (349)
++++|++|||||... ...+.+. +.++|++++++|+.|++.++++++|+|++++ |+||++||..+..+.+ +...|+
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~ 153 (260)
T PRK06523 75 LGGVDILVHVLGGSSAPAGGFAAL-TDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYA 153 (260)
T ss_pred cCCCCEEEECCcccccCCCCcccC-CHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhH
Confidence 688999999999753 2344554 4588999999999999999999999997654 8999999999988866 789999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccccc----chhhhhH------HHHhhhcCCCCHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLED----GAEMQWK------EEREVHVAGGPVEDFARL 252 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~~------~~~~~~~~~~~~edvA~~ 252 (349)
++|+++++++++++.|++++ |+|++++||+++|++......... ....... ....+..+..+|+|+|+.
T Consensus 154 ~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~ 233 (260)
T PRK06523 154 AAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAEL 233 (260)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHH
Confidence 99999999999999999988 999999999999998643211000 0000000 011245567899999999
Q ss_pred HHHHHhcCCceEE
Q 039397 253 IVSGACRGDTYVK 265 (349)
Q Consensus 253 i~~l~~~~~~~i~ 265 (349)
+.+++++..++++
T Consensus 234 ~~~l~s~~~~~~~ 246 (260)
T PRK06523 234 IAFLASDRAASIT 246 (260)
T ss_pred HHHHhCccccccc
Confidence 9999998766654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=246.87 Aligned_cols=225 Identities=23% Similarity=0.268 Sum_probs=179.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|++|||||+||||++++++|+++|++|++++|+.+.+++...++...+.++..+.+| .+.+
T Consensus 2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35788999999999999999999999999999999999888777766664434467778888 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-------CeEEEEeccccccCCCCchh
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-------GRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-------g~IV~isS~~~~~~~~~~~~ 181 (349)
|++|++|||||......+.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++.+.
T Consensus 82 g~id~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~ 160 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLVWEN-SLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI 160 (287)
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence 789999999999877777665 4688999999999999999999999986542 79999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcC--C-eeEEEEecCcccCCCCCCccccc-----cch-h--h-hhHHH--HhhhcCCCCHH
Q 039397 182 YASAKAALVTFYESLRFELND--E-VGITIATHGWIGIEMTKGKFMLE-----DGA-E--M-QWKEE--REVHVAGGPVE 247 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~--~-I~v~~v~PG~v~T~~~~~~~~~~-----~~~-~--~-~~~~~--~~~~~~~~~~e 247 (349)
|++||+++++++++++.|++. . |++++++||+++|++........ ++. . . ..... ........+++
T Consensus 161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 240 (287)
T PRK06194 161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAE 240 (287)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHH
Confidence 999999999999999999874 3 99999999999999876432110 000 0 0 00000 00111247999
Q ss_pred HHHHHHHHHHhcCCceEEcCc
Q 039397 248 DFARLIVSGACRGDTYVKFPS 268 (349)
Q Consensus 248 dvA~~i~~l~~~~~~~i~~p~ 268 (349)
|+|+.++.++.+++.++..+.
T Consensus 241 dva~~i~~~~~~~~~~~~~~~ 261 (287)
T PRK06194 241 EVAQLVFDAIRAGRFYIYSHP 261 (287)
T ss_pred HHHHHHHHHHHcCCeEEEcCH
Confidence 999999999988888877654
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=243.17 Aligned_cols=218 Identities=19% Similarity=0.264 Sum_probs=174.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|+++||||++|||++++++|+++|++|++++|+++.+++...++ +.++..+.+| .+..+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999999999999987776655544 2346667777 23457
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|++|||||.....++.+. +.+++++++++|+.+++.++++++|+|.+ ++++|+++|.++..+.+....|+++|+++
T Consensus 80 ~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~ 157 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDW-DEAMFDRSFNTNVKGPYFLIQALLPLLAN-PASIVLNGSINAHIGMPNSSVYAASKAAL 157 (249)
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEEEEEechHhccCCCCccHHHHHHHHH
Confidence 89999999998776666664 56889999999999999999999999854 57999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh--hhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE--MQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
++++++++.|++++ |++++++||+++|++.+.......... ........+..+..+|+|+|+++++++++...+++.
T Consensus 158 ~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g 237 (249)
T PRK06500 158 LSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVG 237 (249)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence 99999999999887 999999999999998653211111000 000111223456779999999999999877666543
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=240.21 Aligned_cols=211 Identities=19% Similarity=0.139 Sum_probs=172.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEeccc---------------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLNNK--------------- 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d~~--------------- 106 (349)
.+|++|+++||||++|||++++++|+++|++|++++|+++++++...++. ........+.+|..
T Consensus 2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~ 81 (239)
T PRK08703 2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA 81 (239)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999988877666652 22223444555521
Q ss_pred -cC-CCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhh
Q 039397 107 -ES-KAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 107 -~~-g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y 182 (349)
.. +++|++|||||.... .++.+. +.++|++++++|+.|++.++++++|.|.+. .|++|++||..+..+.++...|
T Consensus 82 ~~~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y 160 (239)
T PRK08703 82 EATQGKLDGIVHCAGYFYALSPLDFQ-TVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF 160 (239)
T ss_pred HHhCCCCCEEEEeccccccCCCcccc-CHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccch
Confidence 12 789999999997543 345554 568899999999999999999999999765 4899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC--eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 183 ASAKAALVTFYESLRFELNDE--VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++||+|++.++++++.|+.++ |+|+++.||+++|++......... .....+++|++..+++++++.
T Consensus 161 ~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 228 (239)
T PRK08703 161 GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA------------KSERKSYGDVLPAFVWWASAE 228 (239)
T ss_pred HHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC------------ccccCCHHHHHHHHHHHhCcc
Confidence 999999999999999999864 999999999999998654321111 013468999999999999987
Q ss_pred CceEEc
Q 039397 261 DTYVKF 266 (349)
Q Consensus 261 ~~~i~~ 266 (349)
..+++.
T Consensus 229 ~~~~~g 234 (239)
T PRK08703 229 SKGRSG 234 (239)
T ss_pred ccCcCC
Confidence 777653
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-32 Score=224.59 Aligned_cols=171 Identities=19% Similarity=0.284 Sum_probs=150.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
|++.|.++|||||++|||+++|++|.+.|-+|++++|+++++++..+.. .......|| .+++
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence 4678999999999999999999999999999999999999999877654 344555666 4667
Q ss_pred CCcceeeecCcCCCCcccccc-CCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEV-TDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
..+|+||||||+...-.+... ...++.+..+++|+.+++++++.++|+++++ .+.||++||..++.|....+.||++|
T Consensus 77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTK 156 (245)
T COG3967 77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATK 156 (245)
T ss_pred CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhH
Confidence 889999999999876665522 1235678899999999999999999998766 59999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCC
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIE 217 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~ 217 (349)
||++.++.+|+..++.. |.|..+.|..|+|+
T Consensus 157 AaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 157 AAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 99999999999999987 99999999999997
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=240.54 Aligned_cols=211 Identities=21% Similarity=0.258 Sum_probs=169.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------ccCCCccee
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------KESKAVDHL 114 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------~~~g~iDvl 114 (349)
+++++|+++||||++|||++++++|+++|++|++++|+..... ..++..+.+|. +..+++|++
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~id~l 71 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---------SGNFHFLQLDLSDDLEPLFDWVPSVDIL 71 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---------CCcEEEEECChHHHHHHHHHhhCCCCEE
Confidence 3578999999999999999999999999999999999864321 12455666663 346899999
Q ss_pred eecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHHHH
Q 039397 115 VNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTF 192 (349)
Q Consensus 115 VnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 192 (349)
|||||.... .++.+. +.+++++++++|+.|+++++++++|.|+++ .|+||++||..+..+.++...|+++|++++++
T Consensus 72 v~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 150 (235)
T PRK06550 72 CNTAGILDDYKPLLDT-SLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGF 150 (235)
T ss_pred EECCCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHH
Confidence 999997532 344454 458899999999999999999999998654 48999999999999999999999999999999
Q ss_pred HHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 193 YESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 193 ~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++++.|++++ |+|++++||+++|++....+. +...........+..+..+|||+|+++++++++...+++
T Consensus 151 ~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~ 222 (235)
T PRK06550 151 TKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE--PGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQ 222 (235)
T ss_pred HHHHHHHhhhcCeEEEEEeeCCccCcccccccC--chHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCC
Confidence 99999999887 999999999999998654322 111111112233456788999999999999987665543
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-32 Score=241.98 Aligned_cols=216 Identities=19% Similarity=0.198 Sum_probs=172.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
|++|+++||||++|||+++|++|+++|++|++.. |+....++..+++...+..+..+.+| .+.++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 5689999999999999999999999999998854 44444444444443334456667777 23458
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||.....++.+. +.++|++++++|+.+++.++++++|+|++++ |+||++||..+..+.++...|+++|++
T Consensus 81 ~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a 159 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKM-TREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG 159 (246)
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHH
Confidence 89999999998766666665 4688999999999999999999999997655 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++++++++.|+.+. |++++|+||+++|++..... ++ .........+..+..+++|+++.+++++++...+++
T Consensus 160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ 233 (246)
T PRK12938 160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR---PD-VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFST 233 (246)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC---hH-HHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCcc
Confidence 999999999999887 99999999999999875421 11 111111123445678999999999999988766554
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=246.10 Aligned_cols=218 Identities=21% Similarity=0.256 Sum_probs=175.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.++++|+++||||++|||.+++++|+++|++|++++|+.+. ++.....+...+.++.++.+| .+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999998643 444444443334567778888 233
Q ss_pred CCCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
++++|++|||||.... ..+.+. +.++|++++++|+.+++.+++++++.|++ +|+||++||.++..+.++...|++||
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK 199 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDI-TAEQLDKTFKTNIYSYFHMTKAALPHLKQ-GSAIINTGSITGYEGNETLIDYSATK 199 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHhh-CCeEEEEecccccCCCCCcchhHHHH
Confidence 5789999999998644 344444 56889999999999999999999999854 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++++++++.|+.++ |+|++|+||+++|++...... ...........+..+..+|+|+|+++++++++...+++
T Consensus 200 ~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~ 276 (290)
T PRK06701 200 GAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD---EEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYIT 276 (290)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC---HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCcc
Confidence 99999999999999887 999999999999998754321 11111112223456788999999999999998765554
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-31 Score=241.23 Aligned_cols=246 Identities=24% Similarity=0.328 Sum_probs=191.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEecc-------------ccCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLNN-------------KESK 109 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d~-------------~~~g 109 (349)
|++|+++||||+||||+++++.|+++|++|++++|+.+.+++...++.. ....+.++.+|. +..+
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 80 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG 80 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence 4678999999999999999999999999999999998887776555422 124577778872 2347
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||....+...+. +.+++++.+++|+.|++.++++++|.|++.+ ++||++||..+..+.++...|+++|++
T Consensus 81 ~id~vv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~ 159 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEI-PVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYA 159 (280)
T ss_pred CeeEEEECCcccccCccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHH
Confidence 89999999998877766665 5688999999999999999999999997654 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc-----c-cchhhhhH-----HHHhhhcCCCCHHHHHHHHHHH
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML-----E-DGAEMQWK-----EEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~-----~-~~~~~~~~-----~~~~~~~~~~~~edvA~~i~~l 256 (349)
+++++++++.|+.++ |++++++||+++|++....... . ........ .......+..+|+|+|++++++
T Consensus 160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~ 239 (280)
T PRK06914 160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEI 239 (280)
T ss_pred HHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHH
Confidence 999999999999887 9999999999999976532110 0 00000000 0012234678999999999999
Q ss_pred HhcCCceEEcC--chHHHHHHHHHhchH-HHHHHHHHh
Q 039397 257 ACRGDTYVKFP--SWYDVFLLYRVFAPH-VLNWTFRLL 291 (349)
Q Consensus 257 ~~~~~~~i~~p--~~~~~~~~~~~~~P~-~~~~~~~~l 291 (349)
++++....+++ .......++..++|. +.+|+..+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 277 (280)
T PRK06914 240 AESKRPKLRYPIGKGVKLMILAKKILPWRLWEYLVLKS 277 (280)
T ss_pred HcCCCCCcccccCCchHHHHHHHHhcCHHHHHHHHHHH
Confidence 99987544333 344555567778895 566665543
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-31 Score=240.74 Aligned_cols=212 Identities=22% Similarity=0.239 Sum_probs=169.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
.+|+++||||+||||++++++|+++|++|++++|+.++++.+... ....+..+.+| .+.++++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999999998776654432 12345666777 2335789
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|++|||||....++..+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|+++|++++
T Consensus 80 d~vv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~ 158 (277)
T PRK06180 80 DVLVNNAGYGHEGAIEES-PLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE 158 (277)
T ss_pred CEEEECCCccCCcccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence 999999999877777775 4588999999999999999999999997654 89999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc--hh--hhhH-----HHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG--AE--MQWK-----EEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~--~~--~~~~-----~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+++++++.|+++. +++++++||+++|++.......... .. .... .......+..+|+|+|++++++++++
T Consensus 159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~ 238 (277)
T PRK06180 159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD 238 (277)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence 9999999999887 9999999999999975432211000 00 0000 01122345679999999999999987
Q ss_pred C
Q 039397 261 D 261 (349)
Q Consensus 261 ~ 261 (349)
.
T Consensus 239 ~ 239 (277)
T PRK06180 239 E 239 (277)
T ss_pred C
Confidence 4
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=242.56 Aligned_cols=219 Identities=26% Similarity=0.346 Sum_probs=180.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||+||||++++++|+++|++|++++|++++++++..++.....++..+.+| .+.+
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 35789999999999999999999999999999999999988877776664334457778887 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC---------CCeEEEEeccccccCCCCc
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES---------NGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---------~g~IV~isS~~~~~~~~~~ 179 (349)
+++|++|||||......+.+. +.++|+.++++|+.+++.++++++|.|+++ +|+||++||..+..+.+..
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~ 163 (258)
T PRK06949 85 GTIDILVNNSGVSTTQKLVDV-TPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI 163 (258)
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc
Confidence 789999999998776666665 458899999999999999999999988543 3799999999999888999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
.+|+++|++++.++++++.|+.+. |+|++++||+++|++........ .........+..+...|+|+|+.+.++++
T Consensus 164 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~l~~ 240 (258)
T PRK06949 164 GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETE---QGQKLVSMLPRKRVGKPEDLDGLLLLLAA 240 (258)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999887 99999999999999876432211 11111222345678899999999999999
Q ss_pred cCCceEE
Q 039397 259 RGDTYVK 265 (349)
Q Consensus 259 ~~~~~i~ 265 (349)
+...+++
T Consensus 241 ~~~~~~~ 247 (258)
T PRK06949 241 DESQFIN 247 (258)
T ss_pred hhhcCCC
Confidence 8776665
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=236.16 Aligned_cols=220 Identities=21% Similarity=0.261 Sum_probs=182.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEeccc-------------cCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNNK-------------ESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~~-------------~~g~iD 112 (349)
|++++||||+.|||++.|++||++|.+|++++|++++|+.+++++ .....++..+..|-. ....+-
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 599999999999999999999999999999999999999999998 333456777777721 123578
Q ss_pred eeeecCcCCC--CccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc-CCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 113 HLVNTASLGH--TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-SNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 113 vlVnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+||||+|... +..+.+.++ +.++.++++|+.++..+++.++|.|.+ ++|-|||++|.++..|.|..+.|++||+.+
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~-~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v 207 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPE-GELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFV 207 (312)
T ss_pred EEEecccccCCCcHHHHhCch-hhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHH
Confidence 8999999987 566777643 578999999999999999999999976 459999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcCc
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPS 268 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p~ 268 (349)
+.|+++|+.|++.+ |.|.++.|++|.|+|..... +.....+||..|+..+.-+.. ...+.+-
T Consensus 208 ~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~---------------~sl~~ps~~tfaksal~tiG~--~~~TtGy 270 (312)
T KOG1014|consen 208 DFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK---------------PSLFVPSPETFAKSALNTIGN--ASETTGY 270 (312)
T ss_pred HHHHHHHHHHHHhcCeEEEEeehhheeccccccCC---------------CCCcCcCHHHHHHHHHhhcCC--cccCCCc
Confidence 99999999999998 99999999999999986531 123566789999999888862 3334443
Q ss_pred h-HHHHHHHHHhchHHH
Q 039397 269 W-YDVFLLYRVFAPHVL 284 (349)
Q Consensus 269 ~-~~~~~~~~~~~P~~~ 284 (349)
+ ..+...+..++|..+
T Consensus 271 ~~H~i~~~~~~~~p~~~ 287 (312)
T KOG1014|consen 271 LNHAIQVLLITLLPLWI 287 (312)
T ss_pred cchHHHHHHHHHhHHHH
Confidence 3 345666777778644
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-32 Score=267.68 Aligned_cols=215 Identities=21% Similarity=0.259 Sum_probs=173.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
..+||+++||||++|||+++|++|+++|++|++++|+.+++++...++ +.+...+.+| .+.+|
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 457899999999999999999999999999999999988887766554 2345667777 34568
Q ss_pred CcceeeecCcCCC--CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccCCCCchhhHHH
Q 039397 110 AVDHLVNTASLGH--TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 110 ~iDvlVnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++|+||||||+.. ..++.+. +.++|++++++|+.+++.++++++|+|++++ ++||++||..+..+.++...|+++
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~as 157 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDT-TLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSAS 157 (520)
T ss_pred CCCEEEECCCcCCCCCcccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHH
Confidence 9999999999843 2445554 4688999999999999999999999996543 499999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|+|+++|+++++.|+.++ |+|++|+||+++|++.......... .........+..+..+||++|+.+.+++++...+
T Consensus 158 Kaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~ 235 (520)
T PRK06484 158 KAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKL-DPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASY 235 (520)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchh-hhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 999999999999999988 9999999999999987643211100 0111112223456779999999999999875443
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=242.74 Aligned_cols=214 Identities=16% Similarity=0.099 Sum_probs=164.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcC-CCCeEEEEEecc------------------cc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYN-PINEVTLVSLNN------------------KE 107 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~-~~~~~~~~~~d~------------------~~ 107 (349)
++++||||++|||++++++|+++|++|++++|+ ++++++..+++.. .......+.+|. +.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 689999999999999999999999999998764 5666666655532 233455677772 23
Q ss_pred CCCcceeeecCcCCCCccccccCCc----------chHHHHHHhHhhhhHHHHHHhccccccC-------CCeEEEEecc
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDT----------SIFPRLLDINFWGNVYPTFVALPYLHES-------NGRVVVNASV 170 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~----------~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------~g~IV~isS~ 170 (349)
+|++|+||||||.....++.+.+.. ++|.+++++|+.+++.++++++|+|+++ .|+||+++|.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 5789999999998766555443221 2488999999999999999999998532 3689999999
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHH
Q 039397 171 ENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDF 249 (349)
Q Consensus 171 ~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv 249 (349)
.+..+.++..+|++||+|+++|+++|+.|++++ |+|++|+||+++|+.... ......+........+..+|||+
T Consensus 162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v 236 (267)
T TIGR02685 162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----FEVQEDYRRKVPLGQREASAEQI 236 (267)
T ss_pred hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----hhHHHHHHHhCCCCcCCCCHHHH
Confidence 999999999999999999999999999999888 999999999998763211 01011111111112356899999
Q ss_pred HHHHHHHHhcCCceEEc
Q 039397 250 ARLIVSGACRGDTYVKF 266 (349)
Q Consensus 250 A~~i~~l~~~~~~~i~~ 266 (349)
|+.+++++++...+++.
T Consensus 237 a~~~~~l~~~~~~~~~G 253 (267)
T TIGR02685 237 ADVVIFLVSPKAKYITG 253 (267)
T ss_pred HHHHHHHhCcccCCccc
Confidence 99999999987776653
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=240.28 Aligned_cols=217 Identities=18% Similarity=0.181 Sum_probs=168.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
|.+++|+++||||++|||+++|+.|+++|++|++++++ +++.+....+. ..++..+.+| .+.
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999987654 44444433333 2356677777 223
Q ss_pred CCC-cceeeecCcCCC------CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCc
Q 039397 108 SKA-VDHLVNTASLGH------TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 108 ~g~-iDvlVnnAg~~~------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~ 179 (349)
+|+ +|++|||||... ..++.+. +.++|++++++|+.+++.++++++|.|.++ .|+||++||..+..+.++.
T Consensus 78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~ 156 (253)
T PRK08642 78 FGKPITTVVNNALADFSFDGDARKKADDI-TWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPY 156 (253)
T ss_pred hCCCCeEEEECCCccccccccCCCCcccC-CHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCc
Confidence 455 999999998742 1234443 458899999999999999999999998654 4899999998887777778
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
..|++||+|+++++++++.|++++ |+||+|+||+++|+...... ............+..+..+|+|+|+++.++++
T Consensus 157 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 233 (253)
T PRK08642 157 HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT---PDEVFDLIAATTPLRKVTTPQEFADAVLFFAS 233 (253)
T ss_pred cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC---CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence 899999999999999999999988 99999999999998654321 11111111223355678999999999999999
Q ss_pred cCCceEEc
Q 039397 259 RGDTYVKF 266 (349)
Q Consensus 259 ~~~~~i~~ 266 (349)
+...+++.
T Consensus 234 ~~~~~~~G 241 (253)
T PRK08642 234 PWARAVTG 241 (253)
T ss_pred chhcCccC
Confidence 87666543
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=240.69 Aligned_cols=215 Identities=19% Similarity=0.175 Sum_probs=174.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEE-EecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVL-VARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~-~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
|++|+++||||+||||++++++|+++|++|++ .+|+.++.++..+++...+.....+.+| .+.++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999999887 5788777777666665445567778888 23357
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||.....++.+. +.+++++++++|+.+++.++++++|.|+++ .|+||++||..+..+.+....|+++|++
T Consensus 82 ~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a 160 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMEL-EESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAA 160 (250)
T ss_pred CCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHH
Confidence 89999999998877777776 468899999999999999999999999754 4899999999998888899999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+++++++++.|+.+. |++++++||+++|++...... ... .........+.++..+++|+|+.+++++++...
T Consensus 161 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~ 233 (250)
T PRK08063 161 LEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN-REE-LLEDARAKTPAGRMVEPEDVANAVLFLCSPEAD 233 (250)
T ss_pred HHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC-chH-HHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 999999999999877 999999999999998653211 110 000011122334678999999999999987543
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=240.66 Aligned_cols=221 Identities=16% Similarity=0.122 Sum_probs=164.5
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc----chhhhHHHHhcCCCCeEEEEEec-------------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE----NRLQGSTIDEYNPINEVTLVSLN------------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~----~~l~~~~~~~~~~~~~~~~~~~d------------- 104 (349)
++++++|+++||||++|||+++|++|+++|++|++++++. +..++..+++...+.++..+.+|
T Consensus 3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence 3467899999999999999999999999999977776543 23333334443333456777888
Q ss_pred -cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhH
Q 039397 105 -NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
.+.++++|++|||||.....++.+. +.++|++++++|+.|++.++++++|+|++ +|+|++++|..+..+.++...|+
T Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~~~iv~~~ss~~~~~~~~~~~Y~ 160 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKVLKKPIVEI-SEAEYDEMFAVNSKSAFFFIKEAGRHLND-NGKIVTLVTSLLGAFTPFYSAYA 160 (257)
T ss_pred HHHhhCCCCEEEECCcccCCCCcccC-CHHHHHHHHhhhhhHHHHHHHHHHHhhcc-CCCEEEEecchhcccCCCcccch
Confidence 2346789999999998776666665 45889999999999999999999999964 46788774443334567889999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhh--cCCCCHHHHHHHHHHHHhcC
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVH--VAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~edvA~~i~~l~~~~ 260 (349)
+||+|+++|+++++.|+.++ |+|++++||+++|++....................+. .+..+|+|+|+.+.+++++
T Consensus 161 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~- 239 (257)
T PRK12744 161 GSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD- 239 (257)
T ss_pred hhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-
Confidence 99999999999999999988 9999999999999976432111100000000111111 2678899999999999996
Q ss_pred CceEE
Q 039397 261 DTYVK 265 (349)
Q Consensus 261 ~~~i~ 265 (349)
..+++
T Consensus 240 ~~~~~ 244 (257)
T PRK12744 240 GWWIT 244 (257)
T ss_pred cceee
Confidence 44543
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-31 Score=238.72 Aligned_cols=219 Identities=24% Similarity=0.255 Sum_probs=177.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+++++|+++||||+||||.+++++|+++|++|++++|+.++.++...++.. +.++..+.+| .+.+
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 357899999999999999999999999999999999999887776666543 4457788888 2445
Q ss_pred CCcceeeecCcCCCCc-cccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+++|++|||||..... ++.+. +.+++++.+++|+.|++.+++.+++.|+++ .++||++||..+..+.++...|+.+|
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk 158 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDV-DEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK 158 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence 7899999999985443 34444 468899999999999999999999999654 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
++++.+++.++.+++++ |++++++||+++|++....................+..+..+|+|+|+++++++++...+
T Consensus 159 ~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 236 (251)
T PRK07231 159 GAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASW 236 (251)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 99999999999999886 999999999999998765432111111111112233456789999999999999876543
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-31 Score=239.48 Aligned_cols=215 Identities=19% Similarity=0.203 Sum_probs=173.9
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
+.+++++|+++||||++|||++++++|+++|++|++++|+. . ......+..+.+| .+
T Consensus 2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--L-------TQEDYPFATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--h-------hhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 44678999999999999999999999999999999999986 1 1113356667777 23
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.++++|++|||||.....++.+. +.+++++++++|+.+++.++++++|.|+++ .|+||++||..+..+.++.+.|+++
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s 151 (252)
T PRK08220 73 ETGPLDVLVNAAGILRMGATDSL-SDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGAS 151 (252)
T ss_pred HcCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHH
Confidence 45789999999998877777665 458899999999999999999999999654 4899999999999998999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhh------hhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEM------QWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
|+++++++++++.|+++. |+||++.||+++|++............. .......+..+..+|||+|++++++++
T Consensus 152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 231 (252)
T PRK08220 152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLAS 231 (252)
T ss_pred HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhc
Confidence 999999999999999888 9999999999999986543221111000 111122345678899999999999998
Q ss_pred cCCceEE
Q 039397 259 RGDTYVK 265 (349)
Q Consensus 259 ~~~~~i~ 265 (349)
+...+++
T Consensus 232 ~~~~~~~ 238 (252)
T PRK08220 232 DLASHIT 238 (252)
T ss_pred chhcCcc
Confidence 8766654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-31 Score=237.33 Aligned_cols=219 Identities=19% Similarity=0.218 Sum_probs=179.9
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~ 107 (349)
+.++++|+++||||+||||++++++|+++|++|++++|+++++++...++.....++..+.+|. +.
T Consensus 2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4468899999999999999999999999999999999998888777666644445677778872 23
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
++++|++|||||......+.+. +.+++++.+++|+.+++++++++.|.|.++ +|++|++||..+..+.+....|+++|
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK 160 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATEL-DIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASK 160 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHH
Confidence 4789999999998777666665 458899999999999999999999998654 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
++++++++.++.|++.. |++++++||+++|++...... ...........+..+..+|+|+|++++++++...+++
T Consensus 161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 236 (250)
T PRK12939 161 GAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA---DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFV 236 (250)
T ss_pred HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC---hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCc
Confidence 99999999999999877 999999999999998754321 0111112223345677899999999999998754443
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=240.01 Aligned_cols=217 Identities=15% Similarity=0.152 Sum_probs=174.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cccCCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~~~g~ 110 (349)
+|+++||||++|||.+++++|+++|++|++++|+.+.+++...++.. ....+..+.+| .+.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999998877776655522 12357788888 234589
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
+|++|||||.....++.+. +.++|++++++|+.|++++++++++.|+++ .|+||++||..+..+.+....|++||+|
T Consensus 82 id~vv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa 160 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDF-QLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG 160 (259)
T ss_pred CCEEEECCCcCCCCCcccC-CHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence 9999999998877777775 568999999999999999999999999755 4899999999998888889999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcc-cCCCCCCccccc-------cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWI-GIEMTKGKFMLE-------DGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v-~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
+++++++++.|++++ |+|++++||.+ .|++........ .+..........+.++..+++|+++++++++++
T Consensus 161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~ 240 (259)
T PRK12384 161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP 240 (259)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence 999999999999888 99999999975 777654322110 010111112234567888999999999999987
Q ss_pred CCceE
Q 039397 260 GDTYV 264 (349)
Q Consensus 260 ~~~~i 264 (349)
...++
T Consensus 241 ~~~~~ 245 (259)
T PRK12384 241 KASYC 245 (259)
T ss_pred ccccc
Confidence 65544
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-31 Score=235.07 Aligned_cols=183 Identities=25% Similarity=0.315 Sum_probs=158.4
Q ss_pred HhhhccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------
Q 039397 35 WLYNNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------- 104 (349)
Q Consensus 35 ~~~~~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------- 104 (349)
++.....-.+..+|.|+|||+-+|.|+.+|++|.++|++|++..-+++..+.+..+.. .+....+..|
T Consensus 17 ~~~~~~~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a 94 (322)
T KOG1610|consen 17 VRLERQVLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEA 94 (322)
T ss_pred HHHhhhcccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHH
Confidence 4445555667889999999999999999999999999999999988887777666653 3345555666
Q ss_pred -------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC
Q 039397 105 -------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP 177 (349)
Q Consensus 105 -------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~ 177 (349)
..+ .++-.||||||+.......|..+.+++++++++|++|++.++++++|.+++.+|||||+||+.|..+.|
T Consensus 95 ~~~V~~~l~~-~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p 173 (322)
T KOG1610|consen 95 AQWVKKHLGE-DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALP 173 (322)
T ss_pred HHHHHHhccc-ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCc
Confidence 223 349999999997755444444567999999999999999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCC
Q 039397 178 RMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTK 220 (349)
Q Consensus 178 ~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~ 220 (349)
...+|++||+|++.|+.+|++|+.+. |.|.++.||..+|++..
T Consensus 174 ~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 174 ALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 99999999999999999999999999 99999999999999986
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-31 Score=236.30 Aligned_cols=217 Identities=21% Similarity=0.187 Sum_probs=174.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc-hhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-RLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~-~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+++++|+++||||++|||+++|++|+++|++|+++.|+.+ ..++...++...+.++..+.+| .+.
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999887654 3444444544344567888888 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++++|++|||||.....++.+. +.++|++++++|+.+++.++++++|.|.+ +|+||++||.++..+.++...|+++|+
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 158 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADF-DLEDFDRTIATNLRGAFVVLREAARHLGQ-GGRIINLSTSVIALPLPGYGPYAASKA 158 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhC-CHHHHHHHHhhhchHHHHHHHHHHHHhcc-CcEEEEEeeccccCCCCCCchhHHHHH
Confidence 5789999999998766666665 45889999999999999999999999854 589999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+++.++++++.|+++. +++++++||+++|++...... ...........+..+..+|+|+|+.+++++++...++
T Consensus 159 a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~ 233 (245)
T PRK12937 159 AVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS---AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWV 233 (245)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCc
Confidence 9999999999999887 999999999999998643211 1011111122345577899999999999998766554
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=237.84 Aligned_cols=213 Identities=16% Similarity=0.177 Sum_probs=170.0
Q ss_pred CCCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCc-----------chhhhHHHHhcCCCCeEEEEEec------
Q 039397 44 NMEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRE-----------NRLQGSTIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 44 ~l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~-----------~~l~~~~~~~~~~~~~~~~~~~d------ 104 (349)
++++|+++||||++ |||.++|++|+++|++|++++|++ ........++...+.++..+.+|
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 57889999999995 999999999999999999999982 11112333343334567888888
Q ss_pred --------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccC
Q 039397 105 --------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLP 175 (349)
Q Consensus 105 --------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~ 175 (349)
.+.++++|++|||||+....++.+. +.+++++.+++|+.|++.+++++++.|.++ .|+||++||..+..+
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 160 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEEL-TAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP 160 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence 2345889999999998766666665 458899999999999999999999998654 489999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHH
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~ 254 (349)
.++...|+++|+|+++++++++.|+... |+|++++||+++|++...... .......+..+..+|+|+|+.+.
T Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~a~~~~ 233 (256)
T PRK12748 161 MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK-------HHLVPKFPQGRVGEPVDAARLIA 233 (256)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH-------HhhhccCCCCCCcCHHHHHHHHH
Confidence 8999999999999999999999999887 999999999999997542110 00111223346778999999999
Q ss_pred HHHhcCCceE
Q 039397 255 SGACRGDTYV 264 (349)
Q Consensus 255 ~l~~~~~~~i 264 (349)
+++++....+
T Consensus 234 ~l~~~~~~~~ 243 (256)
T PRK12748 234 FLVSEEAKWI 243 (256)
T ss_pred HHhCcccccc
Confidence 9998765443
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=238.18 Aligned_cols=216 Identities=18% Similarity=0.193 Sum_probs=176.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcce
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDH 113 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDv 113 (349)
|+++||||+||||.+++++|+++|++|++++|+.+++++...++...+..+..+.+| .+.++++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 689999999999999999999999999999999887777666665445567778888 234578999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
+|||||.....++.+. +.++|++++++|+.+++++++++++.|++.+ |+||++||..+..+.+..+.|+++|+++++
T Consensus 81 vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 159 (254)
T TIGR02415 81 MVNNAGVAPITPILEI-TEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG 159 (254)
T ss_pred EEECCCcCCCCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence 9999998777666665 5688999999999999999999999987643 799999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch-------hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA-------EMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+++.++.|+.+. |+|++++||+++|++........... .........+.++..+|||+++++.+++++...+
T Consensus 160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~ 239 (254)
T TIGR02415 160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY 239 (254)
T ss_pred HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence 999999999987 99999999999999865432111000 0001112234567899999999999999987654
Q ss_pred E
Q 039397 264 V 264 (349)
Q Consensus 264 i 264 (349)
+
T Consensus 240 ~ 240 (254)
T TIGR02415 240 I 240 (254)
T ss_pred c
Confidence 4
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=239.56 Aligned_cols=220 Identities=20% Similarity=0.211 Sum_probs=177.6
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+.++++|+++||||+||||++++++|+++|++|++++|++++.++..+++...+.++..+.+| .+.
T Consensus 2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 346889999999999999999999999999999999999988877777665445567778888 233
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccc-ccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL-HES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m-~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.+++|++|||||........+. +.+++++.+++|+.+++.+++++++.| ++. .|+||++||..+..+.+....|+++
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~s 160 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENY-SFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTA 160 (262)
T ss_pred cCCCCEEEECCccCCCCchhhC-CHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence 5789999999998776666654 468899999999999999999999999 544 3899999999999888889999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch--------hhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA--------EMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
|++++++++.++.++.+. |++++++||+++|++........... ...+...........+++|+|++++++
T Consensus 161 k~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l 240 (262)
T PRK13394 161 KHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFL 240 (262)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999877 99999999999999765432111000 000111122345788999999999999
Q ss_pred HhcCCc
Q 039397 257 ACRGDT 262 (349)
Q Consensus 257 ~~~~~~ 262 (349)
++....
T Consensus 241 ~~~~~~ 246 (262)
T PRK13394 241 SSFPSA 246 (262)
T ss_pred cCcccc
Confidence 986543
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=233.27 Aligned_cols=212 Identities=23% Similarity=0.288 Sum_probs=177.1
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|++++++|+++||||+||||++++++|+++|++|++++|+.+++++...++...+..+..+.+| .+
T Consensus 1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (239)
T PRK07666 1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN 80 (239)
T ss_pred CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3456889999999999999999999999999999999999888777666664444567778888 22
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.++++|++|||||......+.+. +.+++++++++|+.+++++++++.|+|.++ .+++|++||..+..+.++...|+++
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 159 (239)
T PRK07666 81 ELGSIDILINNAGISKFGKFLEL-DPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSAS 159 (239)
T ss_pred HcCCccEEEEcCccccCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHH
Confidence 35789999999998766666665 458899999999999999999999998655 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|++++.++++++.|+++. |++++++||+++|++........ .......+++|+|+.++++++.+...+
T Consensus 160 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-----------~~~~~~~~~~~~a~~~~~~l~~~~~~~ 228 (239)
T PRK07666 160 KFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTD-----------GNPDKVMQPEDLAEFIVAQLKLNKRTF 228 (239)
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccc-----------cCCCCCCCHHHHHHHHHHHHhCCCceE
Confidence 999999999999999887 99999999999999865421110 011356889999999999999875543
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=237.97 Aligned_cols=216 Identities=15% Similarity=0.168 Sum_probs=169.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
..|+||+++||||++|||.+++++|+++|++|++++|+..++++..+++.. ..+.+| .+..
T Consensus 3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG-----LFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-----cEEEeeCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999999999999999998777665554421 345566 2334
Q ss_pred CCcceeeecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCC-CCchhhHH
Q 039397 109 KAVDHLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPL-PRMSLYAS 184 (349)
Q Consensus 109 g~iDvlVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~-~~~~~Y~a 184 (349)
+++|++|||||.... ..+.+. +.+.+++++++|+.|++++++.++|.|+++ .|+||++||..+..+. ++...|++
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~ 156 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNT-GLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTA 156 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccC-CHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHH
Confidence 789999999998643 234443 457899999999999999999999999654 5899999998877765 47788999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+|+|++++++.++.|+.++ |+|++++||+++|++.......... .........+..+..+|+|+|+++.+++++...+
T Consensus 157 sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~ 235 (255)
T PRK06057 157 SKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPE-RAARRLVHVPMGRFAEPEEIAAAVAFLASDDASF 235 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 9999999999999999887 9999999999999987654321111 1111111223457889999999999999887665
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 236 ~~ 237 (255)
T PRK06057 236 IT 237 (255)
T ss_pred cc
Confidence 54
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=235.88 Aligned_cols=211 Identities=15% Similarity=0.119 Sum_probs=155.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCccee
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHL 114 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvl 114 (349)
+.++++|+++|||||||||+++|++|+++|++|++++|+..+..+. .. .. . ...+.+| .+.++++|++
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~-~~-~-~~~~~~D~~~~~~~~~~~~~iDil 83 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--ND-ES-P-NEWIKWECGKEESLDKQLASLDVL 83 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hc-cC-C-CeEEEeeCCCHHHHHHhcCCCCEE
Confidence 4578899999999999999999999999999999999986322111 11 11 1 2345566 3456889999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|||||+.... +. +.++|++++++|+.|+++++++++|.|+++ ++.+++.+|.++..+ ++.+.|++||+|+.
T Consensus 84 VnnAG~~~~~---~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKaal~ 158 (245)
T PRK12367 84 ILNHGINPGG---RQ-DPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKRLIG 158 (245)
T ss_pred EECCccCCcC---CC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHHHHH
Confidence 9999975332 22 458899999999999999999999999652 234555566666544 46778999999986
Q ss_pred HHH---HHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 191 TFY---ESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 191 ~l~---~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
.+. +.++.|+... ++|++++||+++|++.. ...++||++|+.+++++++++..+..
T Consensus 159 ~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~--------------------~~~~~~~~vA~~i~~~~~~~~~~~~~ 218 (245)
T PRK12367 159 QLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP--------------------IGIMSADFVAKQILDQANLGLYLIIV 218 (245)
T ss_pred HHHHHHHHHHHhhcccccEEEEecCCCcccccCc--------------------cCCCCHHHHHHHHHHHHhcCCceEEE
Confidence 554 4444455566 99999999999998631 13578999999999999999887664
Q ss_pred -CchHHHHHHHHHhchH
Q 039397 267 -PSWYDVFLLYRVFAPH 282 (349)
Q Consensus 267 -p~~~~~~~~~~~~~P~ 282 (349)
|+++....+.-..+|+
T Consensus 219 ~~~~~~~~~~~~~~~~~ 235 (245)
T PRK12367 219 TPNPLTYLLMPLTELGR 235 (245)
T ss_pred ecCceeEEEeeHHHHHH
Confidence 6555544333334453
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=235.92 Aligned_cols=219 Identities=18% Similarity=0.203 Sum_probs=177.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~ 108 (349)
|++++|+++||||+||||.+++++|+++|++|++++|+.+..++...++. .+..+..+.+|. +..
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999887776666554 344577888882 235
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||......+.+. +.+++++++++|+.+++.+++.+++.|++++ ++||++||..+..+.++...|+++|+
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 158 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTT-DEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG 158 (252)
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence 789999999998776666665 4688999999999999999999999997654 89999999999989999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh-h-hhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE-M-QWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+++.++++++.|++.. +++++++||.+.|++............ . .......+.....+++|+|+.+++++++...+
T Consensus 159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 237 (252)
T PRK06138 159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSF 237 (252)
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence 9999999999999877 999999999999998765422111101 0 11111223345778999999999999886543
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=234.20 Aligned_cols=209 Identities=22% Similarity=0.207 Sum_probs=173.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
++|+++||||++|||++++++|+++|++|++++|++++.+++..++......+..+.+| .+.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45899999999999999999999999999999999888777666654434567778888 2345789
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|++|||||.....++.+. +.+++++++++|+.+++++++.++|.|+++ .|+||++||..+..+.++...|+++|++++
T Consensus 85 d~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~ 163 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEM-PLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA 163 (241)
T ss_pred CEEEECCCccCCCchhhC-CHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence 999999998766666665 458899999999999999999999999755 489999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++++++.|+++. +++++|.||+++|++........ . .......+++|+|+.+++++++++..++
T Consensus 164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~-----~-----~~~~~~~~~~~va~~~~~l~~~~~~~~~ 229 (241)
T PRK07454 164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQA-----D-----FDRSAMLSPEQVAQTILHLAQLPPSAVI 229 (241)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCcccCCccccccccc-----c-----cccccCCCHHHHHHHHHHHHcCCcccee
Confidence 9999999999887 99999999999999864311000 0 0113568999999999999998866543
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=234.61 Aligned_cols=212 Identities=24% Similarity=0.254 Sum_probs=171.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
.+|+++||||+||||++++++|+++|++|++++|+.+++++..... ...+..+.+| .+..+++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999999988776554433 2345666777 2235789
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|++|||||....+++.+. +.++|++++++|+.+++.++++++|.|+++ .|+||++||.++..+.++...|+++|++++
T Consensus 79 d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~ 157 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEV-TESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE 157 (275)
T ss_pred CEEEECCCCccccccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence 999999999887777776 458999999999999999999999999754 489999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccccc--chhhhh---HHHHhhhcCC-CCHHHHHHHHHHHHhcCC
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLED--GAEMQW---KEEREVHVAG-GPVEDFARLIVSGACRGD 261 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~---~~~~~~~~~~-~~~edvA~~i~~l~~~~~ 261 (349)
++++.++.|+++. |+|++++||+++|++......... ...... .......... .+|+|+|+.++++++.+.
T Consensus 158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~ 235 (275)
T PRK08263 158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAEN 235 (275)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCC
Confidence 9999999999887 999999999999998742211100 000111 1112233455 899999999999999764
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=238.72 Aligned_cols=218 Identities=18% Similarity=0.161 Sum_probs=173.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC--CCeEEEEEec--------------c
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTLVSLN--------------N 105 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d--------------~ 105 (349)
..+|++|+++||||+||||+++++.|+++|++|++++|+.++.++...++... ..++.++.+| .
T Consensus 2 ~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (276)
T PRK05875 2 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT 81 (276)
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999988777666555322 2456777777 2
Q ss_pred ccCCCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhH
Q 039397 106 KESKAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
++++++|++|||||.... .+..+. +.+++++++++|+.+++.+++++++.|.++ .|+||++||.++..+.+..++|+
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 160 (276)
T PRK05875 82 AWHGRLHGVVHCAGGSETIGPITQI-DSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYG 160 (276)
T ss_pred HHcCCCCEEEECCCcccCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchH
Confidence 335789999999997543 344443 557899999999999999999999998654 48999999999998888999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++|++++++++.++.|+... |++++|+||+++|++........ . .........+..+..+++|+|+++++++++...
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 238 (276)
T PRK05875 161 VTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESP-E-LSADYRACTPLPRVGEVEDVANLAMFLLSDAAS 238 (276)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCH-H-HHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 99999999999999999887 99999999999999875432111 0 001011122345677899999999999987654
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=235.64 Aligned_cols=220 Identities=19% Similarity=0.228 Sum_probs=178.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccCCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KESKA 110 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g~ 110 (349)
+++|+++||||++|||++++++|+++|++|++++|+.++.++...++.....++..+.+|. +..++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5689999999999999999999999999999999998887776666544445677788882 23578
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+|++|||||.....++.+. +.+++++++++|+.+++++++++++.|++. .++||++||.++..+.++...|+++|+|+
T Consensus 81 ~d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~ 159 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKT-EPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL 159 (250)
T ss_pred CCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence 9999999998766666664 457899999999999999999999999654 48999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhh--hhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEM--QWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++++++++.|+.+. ++++.++||+++|++............. .......+.++..+++|+|+++.+++++...+++
T Consensus 160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~ 238 (250)
T TIGR03206 160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFIT 238 (250)
T ss_pred HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCc
Confidence 99999999999876 9999999999999986653221111111 1112223445678899999999999988766554
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=235.72 Aligned_cols=210 Identities=20% Similarity=0.197 Sum_probs=170.4
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEec--------------cccCCCccee
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDHL 114 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDvl 114 (349)
++||||++|||+++|++|+++|++|++++|+. +.+++...++.....++..+.+| .+.++++|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999999999999998764 44555555554444567888888 2346889999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhc-cccc-cCCCeEEEEeccccccCCCCchhhHHHHHHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVAL-PYLH-ESNGRVVVNASVENWLPLPRMSLYASAKAALVTF 192 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l-p~m~-~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 192 (349)
|||||......+.+. +.++|+.++++|+.|+++++++++ |.++ ++.|+||++||.++..+.++...|+++|++++++
T Consensus 81 i~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 159 (239)
T TIGR01831 81 VLNAGITRDAAFPAL-SEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA 159 (239)
T ss_pred EECCCCCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence 999998776666665 458899999999999999999875 4444 3458999999999999999999999999999999
Q ss_pred HHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 193 YESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 193 ~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++++.|+.++ |+|++++||+++|++...... .........+..+..+|||+|+.+++++++...+++
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 228 (239)
T TIGR01831 160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVEH-----DLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVT 228 (239)
T ss_pred HHHHHHHHhHhCeEEEEEEEccCccccchhhhH-----HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcc
Confidence 99999999887 999999999999998764311 111111223456788999999999999998777665
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=232.87 Aligned_cols=190 Identities=19% Similarity=0.220 Sum_probs=152.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc----------c-CCCcceeeec
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK----------E-SKAVDHLVNT 117 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~----------~-~g~iDvlVnn 117 (349)
+++||||++|||++++++|+++|++|++++|+.+++++...++ ....+.+|.. . .+++|++|||
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 4899999999999999999999999999999988877665543 2345667721 1 1369999999
Q ss_pred CcCCCC------ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 118 ASLGHT------FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 118 Ag~~~~------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
||.... ..+.+ + .++|++++++|+.++++++++++|.|++ +|+||++||.+ .+....|++||+|+++
T Consensus 77 ag~~~~~~~~~~~~~~~-~-~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~g~Iv~isS~~----~~~~~~Y~asKaal~~ 149 (223)
T PRK05884 77 PAPSWDAGDPRTYSLAD-T-ANAWRNALDATVLSAVLTVQSVGDHLRS-GGSIISVVPEN----PPAGSAEAAIKAALSN 149 (223)
T ss_pred CCccccCCCCcccchhc-C-HHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeEEEEecCC----CCCccccHHHHHHHHH
Confidence 985321 12222 2 4789999999999999999999999964 58999999976 3567899999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
|+++++.|++++ |+||+|+||+++|++.+... .. ...+|+|+|+.+.+++++...+++.
T Consensus 150 ~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~-------------~~---p~~~~~~ia~~~~~l~s~~~~~v~G 209 (223)
T PRK05884 150 WTAGQAAVFGTRGITINAVACGRSVQPGYDGLS-------------RT---PPPVAAEIARLALFLTTPAARHITG 209 (223)
T ss_pred HHHHHHHHhhhcCeEEEEEecCccCchhhhhcc-------------CC---CCCCHHHHHHHHHHHcCchhhccCC
Confidence 999999999988 99999999999998643210 01 1238999999999999987777654
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=241.32 Aligned_cols=215 Identities=19% Similarity=0.197 Sum_probs=163.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~ 106 (349)
.+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.. ....+.++.+| .+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999888877766632 23457788888 34
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP----------- 175 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~----------- 175 (349)
.++++|+||||||+.... ..+. +.+.++.++++|+.|++.+++.++|.|+++.|+||++||.++..+
T Consensus 90 ~~~~iD~li~nAG~~~~~-~~~~-t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~ 167 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPP-ERQT-TADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWER 167 (313)
T ss_pred hCCCccEEEECCccccCC-cccc-CcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccc
Confidence 568999999999986542 2233 458899999999999999999999999877789999999987653
Q ss_pred -CCCchhhHHHHHHHHHHHHHHHHHh--cCC-eeEEEEecCcccCCCCCCccccccch--hh-hhHHHHh-hhcCCCCHH
Q 039397 176 -LPRMSLYASAKAALVTFYESLRFEL--NDE-VGITIATHGWIGIEMTKGKFMLEDGA--EM-QWKEERE-VHVAGGPVE 247 (349)
Q Consensus 176 -~~~~~~Y~asKaal~~l~~~la~el--~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~--~~-~~~~~~~-~~~~~~~~e 247 (349)
.++...|++||+|+..|++.|+.++ ..+ |+||+++||+++|++........... .. ....... ......+++
T Consensus 168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
T PRK05854 168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVE 247 (313)
T ss_pred cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHH
Confidence 3456789999999999999999865 344 99999999999999875421100000 00 0000000 011245778
Q ss_pred HHHHHHHHHHhc
Q 039397 248 DFARLIVSGACR 259 (349)
Q Consensus 248 dvA~~i~~l~~~ 259 (349)
+.|...++++..
T Consensus 248 ~ga~~~l~~a~~ 259 (313)
T PRK05854 248 SAILPALYAATS 259 (313)
T ss_pred HHHHHhhheeeC
Confidence 888888877754
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=232.61 Aligned_cols=212 Identities=22% Similarity=0.234 Sum_probs=172.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|+++||||+||||++++++|+++|+.|++.+|+.+++++...+. ...+..+.+| .+.++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE 79 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 678999999999999999999999999999999999988877655543 2346667777 22368
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc-CCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-SNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||.....++.+.+ .++|++++++|+.+++++++++.+.+.+ +.|+||++||..+..+.++...|+++|+|
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a 158 (245)
T PRK12936 80 GVDILVNNAGITKDGLFVRMS-DEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAG 158 (245)
T ss_pred CCCEEEECCCCCCCCccccCC-HHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHH
Confidence 899999999997766666653 4789999999999999999999988754 45899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+.++++.++.|+... +++++++||+++|++...... . .........+..+..+|+|+|+++.+++++...+
T Consensus 159 ~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~ 230 (245)
T PRK12936 159 MIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND---K-QKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAY 230 (245)
T ss_pred HHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh---H-HHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccC
Confidence 999999999999877 999999999999998654211 0 0000111223456778999999999999765443
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=234.99 Aligned_cols=211 Identities=16% Similarity=0.139 Sum_probs=165.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cccC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NKES 108 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~~~ 108 (349)
+++|+++||||++|||+++|+.|+++|++|++++|+.+++++...++.. ....+.++.+| .+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999999998888777666622 23345566777 2445
Q ss_pred CCcceeeecCcCCC---CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCC-------
Q 039397 109 KAVDHLVNTASLGH---TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLP------- 177 (349)
Q Consensus 109 g~iDvlVnnAg~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~------- 177 (349)
+++|++|||||... ...+.+. +.+++++++++|+.+++.++++++|+|++++ |+||++||.++..+..
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~ 160 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDV-SLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT 160 (256)
T ss_pred CCccEEEECCccccccccCccccC-CHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence 78999999998643 2345554 5688999999999999999999999997554 8999999988764321
Q ss_pred ---CchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHH
Q 039397 178 ---RMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLI 253 (349)
Q Consensus 178 ---~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i 253 (349)
....|++||+++++++++++.|+.++ |+|++++||.+.++.... .........+..+..+|+|+|+++
T Consensus 161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~ 232 (256)
T PRK09186 161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA--------FLNAYKKCCNGKGMLDPDDICGTL 232 (256)
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH--------HHHHHHhcCCccCCCCHHHhhhhH
Confidence 22479999999999999999999888 999999999988764211 000111122345678999999999
Q ss_pred HHHHhcCCceE
Q 039397 254 VSGACRGDTYV 264 (349)
Q Consensus 254 ~~l~~~~~~~i 264 (349)
++++++...++
T Consensus 233 ~~l~~~~~~~~ 243 (256)
T PRK09186 233 VFLLSDQSKYI 243 (256)
T ss_pred hheeccccccc
Confidence 99998765554
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=233.13 Aligned_cols=215 Identities=20% Similarity=0.218 Sum_probs=170.4
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcCC--CCeEEEEEec--------------cccCCCcc
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYNP--INEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~~--~~~~~~~~~d--------------~~~~g~iD 112 (349)
++||||++|||+++++.|+++|++|++++|+ .+++++..+++... ......+.+| .+.++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 8999999999999999999999999999998 66666666555322 2234456677 23468899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
++|||||......+.+. +.+++++++++|+.+++.++++++|.|++++ |+||++||.++..+.++.+.|+++|+++++
T Consensus 82 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQI-ELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred EEEECCCcCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 99999998877777665 4688999999999999999999999997654 899999999999999999999999999999
Q ss_pred HHHHHHHHhcCC---eeEEEEecCcccCCCCCCccccccc-hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 192 FYESLRFELNDE---VGITIATHGWIGIEMTKGKFMLEDG-AEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 192 l~~~la~el~~~---I~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++++++.|+..+ |+|++|+||+++|++.......... ..........+..+..+|+|+|+.+++++++...+++
T Consensus 161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 238 (251)
T PRK07069 161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVT 238 (251)
T ss_pred HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence 999999999654 9999999999999987542211111 0111111122345678899999999999887665543
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=234.19 Aligned_cols=222 Identities=18% Similarity=0.223 Sum_probs=176.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKAN-LVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~ 107 (349)
.++++|+++||||++|||+.++++|+++|++ |++++|+.++.++...++...+..+..+.+|. ++
T Consensus 2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999 99999998777766555544445666777772 23
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++++|++|||||......+.+. +.++|++++++|+.|++.+++++++.|.++ .|++|++||..+..+.++...|+++
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s 160 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDT-SPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCAS 160 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHH
Confidence 5789999999998776666665 458899999999999999999999999654 3899999999998888999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc---ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML---EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
|+++++++++++.|+... |+|+.++||+++|++....... .............+..+..++||+|+.+++++++..
T Consensus 161 K~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 240 (260)
T PRK06198 161 KGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDES 240 (260)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhh
Confidence 999999999999999888 9999999999999975321110 000011111112234567899999999999998766
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
.+++
T Consensus 241 ~~~~ 244 (260)
T PRK06198 241 GLMT 244 (260)
T ss_pred CCcc
Confidence 5543
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=232.04 Aligned_cols=215 Identities=24% Similarity=0.220 Sum_probs=167.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHHhcCCCCeEEEEEecc--------------ccCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRENRLQGSTIDEYNPINEVTLVSLNN--------------KESKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g~i 111 (349)
.|+++||||++|||.++++.|+++|++|+++. |+++++++...++.....++..+.+|. +.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 37999999999999999999999999998875 555666665555544445678888881 235789
Q ss_pred ceeeecCcCCCCc-cccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCC-chhhHHH
Q 039397 112 DHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPR-MSLYASA 185 (349)
Q Consensus 112 DvlVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~-~~~Y~as 185 (349)
|++|||||..... .+.+. +.++++.++++|+.+++++++++++.|.++ +|+||++||.++..+.+. ...|++|
T Consensus 82 d~li~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADM-DAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS 160 (248)
T ss_pred CEEEECCccCCCCCChhhC-CHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence 9999999987543 34443 568899999999999999999999988543 378999999998887764 5789999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+++++++++++.|+.+. |+|+.++||+++|++...... .. .........+..+..+|||+|+.+++++++...++
T Consensus 161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~--~~-~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~ 237 (248)
T PRK06947 161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ--PG-RAARLGAQTPLGRAGEADEVAETIVWLLSDAASYV 237 (248)
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC--HH-HHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 999999999999999877 999999999999998643110 00 11111122344567899999999999998876554
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 238 ~ 238 (248)
T PRK06947 238 T 238 (248)
T ss_pred C
Confidence 3
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=239.64 Aligned_cols=210 Identities=19% Similarity=0.149 Sum_probs=163.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||++|||++++++|+++|++|++++|+.++.++...++. .+..+.+| .+.+
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence 36789999999999999999999999999999999999888776665542 25667777 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEecccccc------------C
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWL------------P 175 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~------------~ 175 (349)
+++|+||||||+.... .+. +.++|+..+++|+.|++.++++++|.|++++ ++||++||..+.. +
T Consensus 98 ~~iD~li~nAg~~~~~--~~~-~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~ 174 (315)
T PRK06196 98 RRIDILINNAGVMACP--ETR-VGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG 174 (315)
T ss_pred CCCCEEEECCCCCCCC--Ccc-CCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence 8899999999986432 232 3478999999999999999999999997664 8999999976532 3
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHH-HHhhh-cCCCCHHHHHHH
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKE-EREVH-VAGGPVEDFARL 252 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~edvA~~ 252 (349)
.+....|++||+|++.+++.++.+++++ |+|++|+||+++|++....... ......+.. ...+. .+..+||++|..
T Consensus 175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 253 (315)
T PRK06196 175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE-EQVALGWVDEHGNPIDPGFKTPAQGAAT 253 (315)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh-hhhhhhhhhhhhhhhhhhcCCHhHHHHH
Confidence 3456789999999999999999999887 9999999999999987543211 000011111 11111 146789999999
Q ss_pred HHHHHhcC
Q 039397 253 IVSGACRG 260 (349)
Q Consensus 253 i~~l~~~~ 260 (349)
+++++...
T Consensus 254 ~~~l~~~~ 261 (315)
T PRK06196 254 QVWAATSP 261 (315)
T ss_pred HHHHhcCC
Confidence 99999754
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=230.96 Aligned_cols=212 Identities=23% Similarity=0.296 Sum_probs=171.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++|+++||||++|||.++|++|+++|++|+++.+ +++..++...++...+.++.++.+| .+.+
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467999999999999999999999999999988755 4455555555554444567888888 2335
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||......+.+. +.+.+++++++|+.+++.++++++|.|.++ .|+||++||..+..+.++...|++||+
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 161 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKL-NREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKA 161 (247)
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHH
Confidence 789999999998766665554 458899999999999999999999999654 489999999999988899999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|+++++++++.|+.+. |+++.++||+++|++...... ...... ...........|||+|++++++++.+
T Consensus 162 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~~-~~~~~~~~~~~~edva~~~~~~~~~~ 231 (247)
T PRK12935 162 GMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPE---EVRQKI-VAKIPKKRFGQADEIAKGVVYLCRDG 231 (247)
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccH---HHHHHH-HHhCCCCCCcCHHHHHHHHHHHcCcc
Confidence 9999999999999877 999999999999998654211 101111 11223456789999999999999764
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=232.39 Aligned_cols=216 Identities=20% Similarity=0.212 Sum_probs=173.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g 109 (349)
++++|+++||||+||||.++|++|+++|++|++++|+.++++....++......+..+.+|. +..+
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG 88 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999999999999998887776666644445667788882 2347
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccc-cccCC-CeEEEEeccccccCCCC----chhhH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY-LHESN-GRVVVNASVENWLPLPR----MSLYA 183 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~-m~~~~-g~IV~isS~~~~~~~~~----~~~Y~ 183 (349)
++|++|||||.....+..+. +.+.|++++++|+.+++++++++.++ |.+++ |++|++||..+..+.+. ...|+
T Consensus 89 ~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~ 167 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDH-PVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYN 167 (259)
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHH
Confidence 89999999998666665554 45889999999999999999999998 65443 89999999888766554 48999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++|+++++++++++.|+++. |++++++||+++|++........ ........+..+..++||+|+.+.+++++...
T Consensus 168 ~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 243 (259)
T PRK08213 168 TSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERL----GEDLLAHTPLGRLGDDEDLKGAALLLASDASK 243 (259)
T ss_pred HHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHH----HHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999999999999887 99999999999999865432111 11112223345677899999999999988655
Q ss_pred eE
Q 039397 263 YV 264 (349)
Q Consensus 263 ~i 264 (349)
++
T Consensus 244 ~~ 245 (259)
T PRK08213 244 HI 245 (259)
T ss_pred Cc
Confidence 54
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=231.25 Aligned_cols=214 Identities=25% Similarity=0.247 Sum_probs=166.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcCCCCeEEEEEec--------------cccCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
+|+++||||++|||.+++++|+++|++|++++++ ++..++....+...+..+..+.+| .+.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 5799999999999999999999999999988754 444554444443334456777888 2346789
Q ss_pred ceeeecCcCCCCc-cccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCCc-hhhHHH
Q 039397 112 DHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPRM-SLYASA 185 (349)
Q Consensus 112 DvlVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~~-~~Y~as 185 (349)
|++|||||..... .+.+ .+.++|++++++|+.+++.+++++++.|.++ +|+||++||.++..+.++. ..|+++
T Consensus 82 d~li~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQ-MDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS 160 (248)
T ss_pred CEEEECCCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence 9999999986543 3444 3568899999999999999999999998643 3789999999998888764 679999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+++++++++++.|+.++ |+|++++||.+.|++...... +. .........+..+..+|||+|+++++++++...++
T Consensus 161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~--~~-~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~ 237 (248)
T PRK06123 161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGE--PG-RVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYT 237 (248)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCC--HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence 999999999999999887 999999999999997543211 10 11111222344566789999999999998765543
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=239.34 Aligned_cols=209 Identities=16% Similarity=0.138 Sum_probs=161.5
Q ss_pred EEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcceee
Q 039397 51 IITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDHLV 115 (349)
Q Consensus 51 lVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDvlV 115 (349)
+||||++|||+++|++|+++| ++|++++|++++.++...++......+..+.+| .+.++++|+||
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 999999999888777766664334467777888 24467899999
Q ss_pred ecCcCCCCc-cccccCCcchHHHHHHhHhhhhHHHHHHhccccccC---CCeEEEEeccccccC----------------
Q 039397 116 NTASLGHTF-FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES---NGRVVVNASVENWLP---------------- 175 (349)
Q Consensus 116 nnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---~g~IV~isS~~~~~~---------------- 175 (349)
||||+.... +..+. +.++|++++++|+.|++.++++++|.|+++ +|+||++||.++..+
T Consensus 81 nnAG~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 81 CNAAVYLPTAKEPTF-TADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred ECCCcCCCCCCcCCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 999986442 34444 458899999999999999999999999765 489999999877421
Q ss_pred -------------------CCCchhhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcc-cCCCCCCccccccchhhhh
Q 039397 176 -------------------LPRMSLYASAKAALVTFYESLRFELND-E-VGITIATHGWI-GIEMTKGKFMLEDGAEMQW 233 (349)
Q Consensus 176 -------------------~~~~~~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~ 233 (349)
.++..+|++||+|...+++.++.|+.. + |+|++++||+| +|+|....... ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~--~~~~~~ 237 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL--FRLLFP 237 (308)
T ss_pred hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH--HHHHHH
Confidence 124577999999999999999999965 4 99999999999 78987542111 000000
Q ss_pred HHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 234 KEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 234 ~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
.....+..+..+||+.|+.+++++++...
T Consensus 238 ~~~~~~~~~~~~pe~~a~~~~~l~~~~~~ 266 (308)
T PLN00015 238 PFQKYITKGYVSEEEAGKRLAQVVSDPSL 266 (308)
T ss_pred HHHHHHhcccccHHHhhhhhhhhcccccc
Confidence 01122334578999999999999987543
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=230.54 Aligned_cols=210 Identities=20% Similarity=0.235 Sum_probs=171.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEecc----------------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLNN---------------- 105 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d~---------------- 105 (349)
..+++|+++||||++|||.+++++|+++|++|++++|+.+++++...++.. ....+.++.+|.
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999998887776666532 223444555442
Q ss_pred ccCCCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhH
Q 039397 106 KESKAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+.++++|++|||||.... .++.+. +.+.|++.+++|+.|+++++++++|.|+++ .++||++||..+..+.++...|+
T Consensus 88 ~~~~~id~vi~~Ag~~~~~~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 166 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLGELGPMEQQ-DPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYA 166 (247)
T ss_pred HHhCCCCEEEECCcccCCCCCcccC-CHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccH
Confidence 345789999999998644 344443 458899999999999999999999999764 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||++++++++.++.++... |++++++||+++|++....+.... .....+|||+++.+++++++...
T Consensus 167 ~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 234 (247)
T PRK08945 167 VSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGED------------PQKLKTPEDIMPLYLYLMGDDSR 234 (247)
T ss_pred HHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCccc------------ccCCCCHHHHHHHHHHHhCcccc
Confidence 99999999999999999888 999999999999997544321111 12578999999999999987766
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 235 ~~~ 237 (247)
T PRK08945 235 RKN 237 (247)
T ss_pred ccC
Confidence 553
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=225.47 Aligned_cols=215 Identities=23% Similarity=0.283 Sum_probs=182.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEec--------------cccCCCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d--------------~~~~g~i 111 (349)
+.++|||+|+|||+++|+++..+|++|.++.|+.++++++++.+. ....++.+..+| .+..+.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 799999999999999999999999999999999999999888772 222335566666 2345899
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
|.+|||||...++.+.+. +.++++..+++|+.|++++++++++.|++.. |+|+.+||.++..+..+.++|+++|+|+
T Consensus 114 d~l~~cAG~~v~g~f~~~-s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al 192 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDL-SPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL 192 (331)
T ss_pred ceEEEecCcccccccccC-CHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence 999999999999999998 5699999999999999999999999997654 7999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcC
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFP 267 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p 267 (349)
.++++++++|+..+ |+|....|+.++||........ ..+............++|++|.+++.-+.++...++..
T Consensus 193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~t----kP~~t~ii~g~ss~~~~e~~a~~~~~~~~rg~f~~~~~ 267 (331)
T KOG1210|consen 193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKT----KPEETKIIEGGSSVIKCEEMAKAIVKGMKRGNFTVSLG 267 (331)
T ss_pred HHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccccc----CchheeeecCCCCCcCHHHHHHHHHhHHhhcCeEEeec
Confidence 99999999999988 9999999999999976543211 11112223334467889999999999999988776543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=230.26 Aligned_cols=216 Identities=23% Similarity=0.297 Sum_probs=171.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEecc--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLNN--------------KE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~ 107 (349)
+++++|+++||||+||||+++|++|+++|++|++. .|+.+++++...++......+..+.+|. ++
T Consensus 2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~ 81 (254)
T PRK12746 2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNE 81 (254)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999875 6877776666555543344577788881 11
Q ss_pred ------CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchh
Q 039397 108 ------SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 108 ------~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~ 181 (349)
.+++|++|||||....+...+. +.+.|++++++|+.|++++++++++.|.+ .|++|++||..+..+.++...
T Consensus 82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~ 159 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGIGTQGTIENT-TEEIFDEIMAVNIKAPFFLIQQTLPLLRA-EGRVINISSAEVRLGFTGSIA 159 (254)
T ss_pred hccccCCCCccEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHhhc-CCEEEEECCHHhcCCCCCCcc
Confidence 1479999999998776666665 45889999999999999999999999854 479999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++||+|+++++++++.|+.++ ++|++++||+++|++......... ............+..+++|+|+.+.+++++.
T Consensus 160 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 237 (254)
T PRK12746 160 YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPE--IRNFATNSSVFGRIGQVEDIADAVAFLASSD 237 (254)
T ss_pred hHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChh--HHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence 9999999999999999999877 999999999999998754321110 1111112223456778999999999998875
Q ss_pred Cc
Q 039397 261 DT 262 (349)
Q Consensus 261 ~~ 262 (349)
..
T Consensus 238 ~~ 239 (254)
T PRK12746 238 SR 239 (254)
T ss_pred cC
Confidence 43
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=216.94 Aligned_cols=170 Identities=25% Similarity=0.338 Sum_probs=150.9
Q ss_pred CCCEEEEeCCC-chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------------cccCC
Q 039397 46 EDKVVIITGAS-SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------------NKESK 109 (349)
Q Consensus 46 ~~k~vlVTGas-~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------------~~~~g 109 (349)
+.|.|+|||+| ||||.++|++|+++|+.|+.++|+.+....+..+.. ......| ...+|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~g-----l~~~kLDV~~~~~V~~v~~evr~~~~G 80 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFG-----LKPYKLDVSKPEEVVTVSGEVRANPDG 80 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhC-----CeeEEeccCChHHHHHHHHHHhhCCCC
Confidence 35889999887 899999999999999999999999988877665431 2223333 23679
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|+|+||||.....+..+. +.++.+++|++|++|+++++|++...+.+.+|.|||++|..+..|.|..+.|+|||||+
T Consensus 81 kld~L~NNAG~~C~~Pa~d~-~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAi 159 (289)
T KOG1209|consen 81 KLDLLYNNAGQSCTFPALDA-TIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAI 159 (289)
T ss_pred ceEEEEcCCCCCcccccccC-CHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHH
Confidence 99999999999999998887 45899999999999999999999966778889999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCC
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKG 221 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~ 221 (349)
+++++.|+.|+++. |+|..+.||.|.|++...
T Consensus 160 hay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 160 HAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred HHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 99999999999999 999999999999998776
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=231.34 Aligned_cols=216 Identities=22% Similarity=0.243 Sum_probs=176.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
|++|+++||||+++||++++++|+++|++|++++|+.+++++...++.....++..+.+| .+..++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999999999988887776665445567788888 223468
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+|++|||||........+. +.++++.++++|+.+++++++.+++.|++++ ++||++||..+..+.++.+.|+++|+++
T Consensus 82 ~d~vi~~a~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~ 160 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDF-PTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL 160 (258)
T ss_pred CCEEEECCCCCCCCChhhC-CHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence 9999999998877766665 4588999999999999999999999997654 8999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch-----hhh---hHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA-----EMQ---WKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+++++.++.|+... |++++++||+++|++........... ... ...........++++|+|+.+++++++.
T Consensus 161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 240 (258)
T PRK12429 161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA 240 (258)
T ss_pred HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence 99999999999877 99999999999999865422111000 000 0011123356889999999999999875
Q ss_pred C
Q 039397 261 D 261 (349)
Q Consensus 261 ~ 261 (349)
.
T Consensus 241 ~ 241 (258)
T PRK12429 241 A 241 (258)
T ss_pred c
Confidence 4
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=228.54 Aligned_cols=215 Identities=23% Similarity=0.269 Sum_probs=167.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+++++|+++||||++|||++++++|+++|++|++..|+. +........+...+.+...+.+| .+.
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999998877643 33433333333333456667777 233
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++++|++|||||.....++.+. +.+++++.+++|+.+.+.+++++.|+|++ .|+||++||.++..+.++...|++||+
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 159 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNV-DDKLIDKHISTDFKSVIYCSQELAKEMRE-GGAIVNIASVAGIRPAYGLSIYGAMKA 159 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhC-CHHHHHHHHhHhCHHHHHHHHHHHHHhhc-CcEEEEEcchhccCCCCCchHHHHHHH
Confidence 5789999999999777776665 44778999999999999999999999865 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
++++++++++.|+++.|+++.+.||+++|++.......................+..+|||+|++++++++.
T Consensus 160 ~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~ 231 (252)
T PRK06077 160 AVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI 231 (252)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc
Confidence 999999999999987799999999999999864322111100111111122334679999999999999964
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=228.78 Aligned_cols=210 Identities=17% Similarity=0.112 Sum_probs=166.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
...+|+++||||++|||++++++|+++|++|++++++ .+.++++..++...+..+..+.+| .+..
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3568999999999999999999999999999988765 445555555553334567778888 2235
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||.....++.+. +.+++++++++|+.|++.+++++.+.|+++ .|+||+++|..+..+.|....|++||+
T Consensus 86 ~~iD~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~ 164 (258)
T PRK09134 86 GPITLLVNNASLFEYDSAASF-TRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKA 164 (258)
T ss_pred CCCCEEEECCcCCCCCccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHH
Confidence 789999999998776666665 458899999999999999999999998754 489999999888888888889999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|+++++++++.|+.+.|+|++++||++.|+..... . .........+.++..+++|+|++++++++..
T Consensus 165 a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~-----~-~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 231 (258)
T PRK09134 165 ALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSP-----E-DFARQHAATPLGRGSTPEEIAAAVRYLLDAP 231 (258)
T ss_pred HHHHHHHHHHHHhcCCcEEEEeecccccCCcccCh-----H-HHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence 99999999999997669999999999988643210 0 1111111223456788999999999999853
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=236.76 Aligned_cols=212 Identities=16% Similarity=0.145 Sum_probs=162.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
.+|+++||||++|||+++|++|+++| ++|++++|+++++++...++......+..+.+| .+.+++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 37899999999999999999999999 999999999988877776664444566777888 234678
Q ss_pred cceeeecCcCCCCc-cccccCCcchHHHHHHhHhhhhHHHHHHhccccccC---CCeEEEEeccccccC-----------
Q 039397 111 VDHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES---NGRVVVNASVENWLP----------- 175 (349)
Q Consensus 111 iDvlVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---~g~IV~isS~~~~~~----------- 175 (349)
+|++|||||+.... ...+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+
T Consensus 82 iD~lI~nAG~~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~ 160 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRF-TADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN 160 (314)
T ss_pred CCEEEECCCccccCcccccc-CHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence 99999999985432 22233 458899999999999999999999999765 389999999977421
Q ss_pred ----------------------CCCchhhHHHHHHHHHHHHHHHHHhc-CC-eeEEEEecCcc-cCCCCCCccccccchh
Q 039397 176 ----------------------LPRMSLYASAKAALVTFYESLRFELN-DE-VGITIATHGWI-GIEMTKGKFMLEDGAE 230 (349)
Q Consensus 176 ----------------------~~~~~~Y~asKaal~~l~~~la~el~-~~-I~v~~v~PG~v-~T~~~~~~~~~~~~~~ 230 (349)
..+..+|++||+|+..+++.++.++. ++ |+|++++||+| +|++.+....... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~--~ 238 (314)
T TIGR01289 161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFR--T 238 (314)
T ss_pred ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHH--H
Confidence 12456799999999999999999985 34 99999999999 6998754211000 0
Q ss_pred hhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 231 MQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 231 ~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
..............+||+.|+.+++++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~ 268 (314)
T TIGR01289 239 LFPPFQKYITKGYVSEEEAGERLAQVVSDP 268 (314)
T ss_pred HHHHHHHHHhccccchhhhhhhhHHhhcCc
Confidence 000011111234678999999999988753
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=228.40 Aligned_cols=211 Identities=20% Similarity=0.205 Sum_probs=166.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~ 108 (349)
+++++|+++||||+||||++++++|+++|++|++++|+++..+....++.........+.+|. +..
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 357899999999999999999999999999999999998777666665543334566777872 234
Q ss_pred CCcceeeecCcCCC---CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHH
Q 039397 109 KAVDHLVNTASLGH---TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 109 g~iDvlVnnAg~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
+++|++|||||+.. ..++.+. +.+++++++++|+.++++++++++|.|.++ .|+||++||.+++. +.+.|++
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~ 157 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITV-PWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGL 157 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHH
Confidence 68999999999864 2344454 468899999999999999999999998654 58999999988764 4578999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
||+|+++++++++.|+... |++++++||+++|++...... ...........+.....+|+|+|+.+++++++.
T Consensus 158 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 231 (250)
T PRK07774 158 AKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP---KEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDE 231 (250)
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence 9999999999999999877 999999999999998754321 101111111222345678999999999998764
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=230.35 Aligned_cols=217 Identities=23% Similarity=0.201 Sum_probs=172.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|+++||||++|||++++++|+++|++|++++|+.+.+++...++...+.++..+.+| .+..+
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5778999999999999999999999999999999999877766655554334467777888 22357
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||........+. +.+++++.+++|+.|+++++++++|.|+++ .|+||++||..+..+.++...|+++|++
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 165 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEI-STEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAG 165 (274)
T ss_pred CCCEEEECCCcCCCcccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHH
Confidence 89999999998766666654 458899999999999999999999998654 4899999999999888989999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhh-hHH-HHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQ-WKE-EREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++++++.++.|+.+. |++++++||+++|++.............. ... ..........+||+|++++++++.+.
T Consensus 166 ~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~ 241 (274)
T PRK07775 166 LEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETPR 241 (274)
T ss_pred HHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCCC
Confidence 999999999999877 99999999999999754321110000000 000 01112457899999999999998753
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=227.57 Aligned_cols=213 Identities=22% Similarity=0.175 Sum_probs=171.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc----------ccCCCcc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN----------KESKAVD 112 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~----------~~~g~iD 112 (349)
.++++|+++||||++|||+++++.|+++|++|++++|+.+++++..... ....+.+|. +..+++|
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~d 79 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAAAGAFD 79 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHHhCCCC
Confidence 4688999999999999999999999999999999999987766554432 133455662 2346899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
++|||||........+. +.+++++++++|+.+++.+++++++.+++++ |+||++||..+..+.+....|+++|++++
T Consensus 80 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~ 158 (245)
T PRK07060 80 GLVNCAGIASLESALDM-TAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALD 158 (245)
T ss_pred EEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHH
Confidence 99999999776666664 5588999999999999999999999986554 89999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
.++++++.++.+. |++++++||+++|++....+.... .........+..+..+++|+|+++++++++....
T Consensus 159 ~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 230 (245)
T PRK07060 159 AITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQ--KSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASM 230 (245)
T ss_pred HHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHH--HHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence 9999999999877 999999999999998654322111 1111112234567889999999999999876543
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=225.75 Aligned_cols=208 Identities=25% Similarity=0.292 Sum_probs=164.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcce
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDH 113 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDv 113 (349)
++++||||+||||.++++.|+++|++|++++|+++++++....+ ..++..+.+| .+.++++|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 37999999999999999999999999999999988777655543 2356677777 233578999
Q ss_pred eeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 114 LVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 114 lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
+|||||.... .++.+. +.+++++++++|+.|++.++++++|+|++++ ++||++||..+..+.++...|+++|+++++
T Consensus 78 vi~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 156 (248)
T PRK10538 78 LVNNAGLALGLEPAHKA-SVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_pred EEECCCccCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence 9999997542 344443 5688999999999999999999999997654 899999999999899999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCc-cccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGK-FMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+++.++.|+.+. |++++++||++.|++.... ...... .. ..........+|||+|++++++++..+.+
T Consensus 157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~dvA~~~~~l~~~~~~~ 226 (248)
T PRK10538 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDG---KA-EKTYQNTVALTPEDVSEAVWWVATLPAHV 226 (248)
T ss_pred HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHH---HH-HhhccccCCCCHHHHHHHHHHHhcCCCcc
Confidence 999999999988 9999999999985443221 111110 00 00111224579999999999999876554
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=220.88 Aligned_cols=188 Identities=20% Similarity=0.245 Sum_probs=150.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccccc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEE 128 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~~~ 128 (349)
+++||||++|||++++++|+++ ++|++++|+.... ..|+.+... +....+..+++|++|||||.....++.+
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~---~~D~~~~~~----~~~~~~~~~~id~lv~~ag~~~~~~~~~ 73 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDV---QVDITDPAS----IRALFEKVGKVDAVVSAAGKVHFAPLAE 73 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCce---EecCCChHH----HHHHHHhcCCCCEEEECCCCCCCCchhh
Confidence 6999999999999999999999 9999999976421 111111100 0000234578999999999877676666
Q ss_pred cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEE
Q 039397 129 VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGIT 207 (349)
Q Consensus 129 ~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~ 207 (349)
. +.++|++.+++|+.++++++++++|+|++ +|+|+++||..+..+.++...|+++|+|+++|+++++.|+ ++ |+||
T Consensus 74 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~ 150 (199)
T PRK07578 74 M-TDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGIRIN 150 (199)
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCCeEEE
Confidence 5 45889999999999999999999999964 5899999999999999999999999999999999999999 66 9999
Q ss_pred EEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 208 IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 208 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+|+||+++|++..... ..+.....+|||+|+.++++++..
T Consensus 151 ~i~Pg~v~t~~~~~~~-------------~~~~~~~~~~~~~a~~~~~~~~~~ 190 (199)
T PRK07578 151 VVSPTVLTESLEKYGP-------------FFPGFEPVPAARVALAYVRSVEGA 190 (199)
T ss_pred EEcCCcccCchhhhhh-------------cCCCCCCCCHHHHHHHHHHHhccc
Confidence 9999999998742110 001224679999999999999753
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=226.18 Aligned_cols=212 Identities=20% Similarity=0.202 Sum_probs=169.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
|+++||||++|||+++|++|+++|++|++++|+..+ ..+..........++.++.+| .+..+++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999999999999999998542 222222222234457778888 23357899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
++|||||......+.+. +.++|++++++|+.++++++++++|.|++. .|+||++||..+..+.++.+.|+++|+|+++
T Consensus 83 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 83 ILVNNAGITRDSVFKRM-SHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred EEEECCCCCCCCccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 99999998776666665 468999999999999999999999999654 4899999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+++.++.|+++. |++++++||+++|++...... . .........+.....+++|+|+++.+++++...++
T Consensus 162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 231 (245)
T PRK12824 162 FTKALASEGARYGITVNCIAPGYIATPMVEQMGP---E-VLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFI 231 (245)
T ss_pred HHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH---H-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCc
Confidence 999999999887 999999999999998654311 1 11111222345567899999999999997755443
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-29 Score=221.46 Aligned_cols=214 Identities=24% Similarity=0.297 Sum_probs=181.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAV 111 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~i 111 (349)
+++++|+++||||+||||+++|++|+++|+ +|++++|+.+++++ .+..+..+.+| .+..+++
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~i 74 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAASDV 74 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 467899999999999999999999999999 99999999876553 23356677777 2345679
Q ss_pred ceeeecCcC-CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 112 DHLVNTASL-GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 112 DvlVnnAg~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
|++|||||. .....+.+. +.+++++.+++|+.+++.+++++.|.+++. .+++|++||..+..+.++...|+++|+++
T Consensus 75 d~vi~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~ 153 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEG-DEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAA 153 (238)
T ss_pred CEEEECCCcCCCCCccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHH
Confidence 999999998 445555554 568899999999999999999999998654 48999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcCc
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPS 268 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p~ 268 (349)
+++++.++.|+.+. ++++++.||.++|++..... ....+++++|+.++..+..+...++.+.
T Consensus 154 ~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~~~i~~~~ 216 (238)
T PRK08264 154 WSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD-----------------APKASPADVARQILDALEAGDEEVLPDE 216 (238)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC-----------------cCCCCHHHHHHHHHHHHhCCCCeEeccH
Confidence 99999999999887 99999999999999854321 1367889999999999999999999988
Q ss_pred hHHHHHHHHHhch
Q 039397 269 WYDVFLLYRVFAP 281 (349)
Q Consensus 269 ~~~~~~~~~~~~P 281 (349)
..+.+..+....|
T Consensus 217 ~~~~~~~~~~~~~ 229 (238)
T PRK08264 217 MARQVKAALSADP 229 (238)
T ss_pred HHHHHHHHhhcCC
Confidence 7777666666666
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=224.31 Aligned_cols=204 Identities=22% Similarity=0.210 Sum_probs=162.7
Q ss_pred EEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcceeeecCcC
Q 039397 51 IITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHLVNTASL 120 (349)
Q Consensus 51 lVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvlVnnAg~ 120 (349)
+||||++|||++++++|+++|++|++++|+.+++++...++.. +..+.++.+| .+..+++|++|||||.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~ 79 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD 79 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 6999999999999999999999999999998777766555532 3457778888 2345789999999999
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHh
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el 200 (349)
....++.+. +.+++++++++|+.+++++++ ++.|. +.|+||++||.++..+.++.+.|+++|+++++++++++.|+
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~--~~~~~-~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~ 155 (230)
T PRK07041 80 TPGGPVRAL-PLAAAQAAMDSKFWGAYRVAR--AARIA-PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALEL 155 (230)
T ss_pred CCCCChhhC-CHHHHHHHHHHHHHHHHHHHh--hhhhc-CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 877767665 468899999999999999999 44553 46899999999999999999999999999999999999999
Q ss_pred cCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 201 NDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 201 ~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.+ |+|++++||+++|++....................+..+..+|||+|++++++++++
T Consensus 156 ~~-irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 214 (230)
T PRK07041 156 AP-VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANG 214 (230)
T ss_pred hC-ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence 77 999999999999998653211111111111111223446678999999999999753
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=223.67 Aligned_cols=212 Identities=19% Similarity=0.207 Sum_probs=170.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
|+++||||++|||++++++|+++|++|++++| +.++.++...+.......+..+.+| .+..+++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 68999999999999999999999999999998 5555555444443334467778887 23457899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
++|||||......+.+. +.+++++.+++|+.+++.++++++|.|++++ |+||++||..+..+.++...|+++|++++.
T Consensus 81 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~ 159 (242)
T TIGR01829 81 VLVNNAGITRDATFKKM-TYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG 159 (242)
T ss_pred EEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence 99999998776666665 5688999999999999999999999997654 899999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
++++++.|+... +++++++||+++|++...... . .........+..+..+|+|+|+.+.+++++...++
T Consensus 160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~ 229 (242)
T TIGR01829 160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMRE---D-VLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYI 229 (242)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCCCcCccccccch---H-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence 999999999877 999999999999998754211 1 11111112345577899999999999998765544
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-29 Score=223.71 Aligned_cols=211 Identities=20% Similarity=0.201 Sum_probs=167.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|+++||||++|||.++++.|+++|++|++++|+.+++++...++...+.++..+.+| .+..+
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999999888877766664444567777787 12347
Q ss_pred CcceeeecCcCCCCccc--------cccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCc
Q 039397 110 AVDHLVNTASLGHTFFF--------EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~--------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~ 179 (349)
++|++|||||....... ....+.++++.++++|+.|++++++.++|.|.++ +|.||++||.. ..+.++.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~ 160 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ 160 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence 89999999997543322 1222457899999999999999999999998644 47899988864 4677888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+.|++||+|+++++++++.|+.++ |++++++||+++|++...... . .........+.....++||+|+.+.++++
T Consensus 161 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~ 236 (253)
T PRK08217 161 TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKP---E-ALERLEKMIPVGRLGEPEEIAHTVRFIIE 236 (253)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCH---H-HHHHHHhcCCcCCCcCHHHHHHHHHHHHc
Confidence 999999999999999999999877 999999999999998754311 1 11111122244567899999999999996
Q ss_pred c
Q 039397 259 R 259 (349)
Q Consensus 259 ~ 259 (349)
.
T Consensus 237 ~ 237 (253)
T PRK08217 237 N 237 (253)
T ss_pred C
Confidence 4
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-29 Score=222.89 Aligned_cols=196 Identities=18% Similarity=0.170 Sum_probs=154.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcceee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHLV 115 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvlV 115 (349)
|+++||||++|||++++++|+++| +.|++.+|+.... . ...++.++++| .+..+++|++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--ccCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 479999999999999999999985 6676667654321 1 12356677888 23468899999
Q ss_pred ecCcCCCCc------cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEecccccc---CCCCchhhHHH
Q 039397 116 NTASLGHTF------FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWL---PLPRMSLYASA 185 (349)
Q Consensus 116 nnAg~~~~~------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~---~~~~~~~Y~as 185 (349)
||||..... .+++. +.+.|++.+++|+.+++.+++.++|.|++++ |+|+++||..+.. +.++...|+++
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~-~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~as 151 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQAL-DADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRAS 151 (235)
T ss_pred ECCccccccccCcccccccC-CHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhh
Confidence 999987532 33443 5578999999999999999999999997654 7999999876643 34667899999
Q ss_pred HHHHHHHHHHHHHHhcC--C-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 186 KAALVTFYESLRFELND--E-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 186 Kaal~~l~~~la~el~~--~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
|+|+++|+++|+.|+++ . |+|++|+||+++|++..... ...+..+..+|||+|+.++++++++..
T Consensus 152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~------------~~~~~~~~~~~~~~a~~~~~l~~~~~~ 219 (235)
T PRK09009 152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ------------QNVPKGKLFTPEYVAQCLLGIIANATP 219 (235)
T ss_pred HHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh------------hccccCCCCCHHHHHHHHHHHHHcCCh
Confidence 99999999999999986 3 99999999999999875421 112234578999999999999998765
Q ss_pred eE
Q 039397 263 YV 264 (349)
Q Consensus 263 ~i 264 (349)
++
T Consensus 220 ~~ 221 (235)
T PRK09009 220 AQ 221 (235)
T ss_pred hh
Confidence 54
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=253.69 Aligned_cols=221 Identities=19% Similarity=0.156 Sum_probs=176.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~ 106 (349)
..+++|+++||||++|||++++++|+++|++|++++|+.+.++....++.. ....+..+.+| .+
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999998887766655532 22356677788 24
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.+|++|++|||||+....++.+. +.++|+..+++|+.+++.+++.+++.|+++ +|+||++||..+..+.++..+|++
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~-~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~a 568 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEET-TLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSA 568 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHH
Confidence 56899999999998776677665 468899999999999999999999999765 379999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccC--CCCCCccccc--------cchhhhhHHHHhhhcCCCCHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGI--EMTKGKFMLE--------DGAEMQWKEEREVHVAGGPVEDFARLI 253 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T--~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~edvA~~i 253 (349)
||+|+++++++++.|++++ |+||+|+||.+.| .+........ ..........+.+.++.++|||+|+++
T Consensus 569 SKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av 648 (676)
T TIGR02632 569 AKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAV 648 (676)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence 9999999999999999988 9999999999864 3322211000 000011122344566788999999999
Q ss_pred HHHHhcCCceE
Q 039397 254 VSGACRGDTYV 264 (349)
Q Consensus 254 ~~l~~~~~~~i 264 (349)
++++++...++
T Consensus 649 ~~L~s~~~~~~ 659 (676)
T TIGR02632 649 FFLASSKSEKT 659 (676)
T ss_pred HHHhCCcccCC
Confidence 99998765443
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=222.37 Aligned_cols=230 Identities=20% Similarity=0.265 Sum_probs=181.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------c-cCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------K-ESKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~-~~g~iD 112 (349)
|+++||||+||||.++++.|+++|++|++++|+.++++.... . .+..+.+|. + ..+++|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~-----~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-L-----GFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-C-----CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 789999999999999999999999999999999877654432 1 234555551 1 236799
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
.+|||||.....+..+. +.+++++++++|+.|++++++.+++.|++.+ ++||++||..+..+.++...|+++|++++.
T Consensus 77 ~ii~~ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~ 155 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTI-SRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEA 155 (256)
T ss_pred EEEECCCCCCccchhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence 99999998766666665 4688999999999999999999999987654 899999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcC--c
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFP--S 268 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p--~ 268 (349)
++++++.++... +++++++||+++|++............ ............+|||+|+.+..++++++..++.| .
T Consensus 156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~ 233 (256)
T PRK08017 156 WSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKP--VENPGIAARFTLGPEAVVPKLRHALESPKPKLRYPVTL 233 (256)
T ss_pred HHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccc--hhhhHHHhhcCCCHHHHHHHHHHHHhCCCCCceeecCc
Confidence 999999999888 999999999999997754321111100 00001111245899999999999999998887765 4
Q ss_pred hHHHHHHHHHhchH-HHHH
Q 039397 269 WYDVFLLYRVFAPH-VLNW 286 (349)
Q Consensus 269 ~~~~~~~~~~~~P~-~~~~ 286 (349)
+......+.+++|. ++.+
T Consensus 234 ~~~~~~~~~~~~p~~~~~~ 252 (256)
T PRK08017 234 VTHAVMVLKRLLPGRMMDK 252 (256)
T ss_pred chHHHHHHHHHCCHHHHHH
Confidence 56677788889995 4444
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=222.30 Aligned_cols=210 Identities=22% Similarity=0.262 Sum_probs=166.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g~iD 112 (349)
.|++|||||+||||++++++|+++|++|++++|+.+.+++..... ...+.++.+|. +..+++|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 378999999999999999999999999999999987766554432 23566777772 2357899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
++|||||....++..+. +.+++++.+++|+.|+++++++++|+|++++ ++||++||..+..+.|+.+.|++||+++++
T Consensus 79 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 157 (276)
T PRK06482 79 VVVSNAGYGLFGAAEEL-SDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG 157 (276)
T ss_pred EEEECCCCCCCcccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence 99999999877777665 4578999999999999999999999987654 899999999998889999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc-----cchhh-hhHHHHh--hhcCCCCHHHHHHHHHHHHhcC
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE-----DGAEM-QWKEERE--VHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~-----~~~~~-~~~~~~~--~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++++++.|+++. |+++.++||.+.|++........ +.... ....... ......+++|++++++.++..+
T Consensus 158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~ 235 (276)
T PRK06482 158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQT 235 (276)
T ss_pred HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCC
Confidence 999999999877 99999999999999865322110 00000 0111111 1112368999999999999765
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=233.29 Aligned_cols=215 Identities=14% Similarity=0.100 Sum_probs=163.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVN 116 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVn 116 (349)
+++||+++|||||||||++++++|+++|++|++++|+++++++...+ ....+..+.+|. +..+++|++||
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~---~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn 251 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING---EDLPVKTLHWQVGQEAALAELLEKVDILII 251 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence 45789999999999999999999999999999999987765432221 122345566662 33578999999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-----CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-----GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
|||+.... +. +.+++++++++|+.|+++++++++|.|++++ +.+|++|| ++ ...+..+.|++||+|+.+
T Consensus 252 nAGi~~~~---~~-s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASKaAl~~ 325 (406)
T PRK07424 252 NHGINVHG---ER-TPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSKRALGD 325 (406)
T ss_pred CCCcCCCC---CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHHHHHHH
Confidence 99986432 32 4578999999999999999999999997543 23455543 44 333556789999999999
Q ss_pred HHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcCc--h
Q 039397 192 FYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPS--W 269 (349)
Q Consensus 192 l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p~--~ 269 (349)
+++ ++.+..+ +.|..++||+++|++.. ...++||++|+.++++++++++++.+|. +
T Consensus 326 l~~-l~~~~~~-~~I~~i~~gp~~t~~~~--------------------~~~~spe~vA~~il~~i~~~~~~i~v~~~~~ 383 (406)
T PRK07424 326 LVT-LRRLDAP-CVVRKLILGPFKSNLNP--------------------IGVMSADWVAKQILKLAKRDFRNIIVTINPL 383 (406)
T ss_pred HHH-HHHhCCC-CceEEEEeCCCcCCCCc--------------------CCCCCHHHHHHHHHHHHHCCCCEEEeCchHH
Confidence 985 4444332 67888899999988632 1357899999999999999999998874 4
Q ss_pred HHHHHHHHHhchHHHHHHHH
Q 039397 270 YDVFLLYRVFAPHVLNWTFR 289 (349)
Q Consensus 270 ~~~~~~~~~~~P~~~~~~~~ 289 (349)
...+..++.++|.+..++.+
T Consensus 384 ~~~~~~i~~~~~~~~~~l~~ 403 (406)
T PRK07424 384 TYLLFPIKEFSVSLYFKLFS 403 (406)
T ss_pred HHHHHHHHHhhHHHHHHHhc
Confidence 55666788888877766653
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=221.65 Aligned_cols=213 Identities=22% Similarity=0.256 Sum_probs=169.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC----cchhhhHHHHhcCCCCeEEEEEecc--------------
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR----ENRLQGSTIDEYNPINEVTLVSLNN-------------- 105 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~----~~~l~~~~~~~~~~~~~~~~~~~d~-------------- 105 (349)
++++|+++||||+||||+++|++|+++|++|++++|. ++..++...++...+..+.++.+|.
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999999997764 3334444444443445677888882
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhc-cccccCC-CeEEEEeccccccCCCCchhhH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVAL-PYLHESN-GRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l-p~m~~~~-g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+..+++|++|||||.....++.+. +.++|++++++|+.+++++++++. +.|++++ +++|++||..+..+.++...|+
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~ 161 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAEL-SIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYA 161 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhH
Confidence 234789999999999877777665 468899999999999999999999 5665443 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++|++++.++++++.|+++. +++++++||+++|++....... .+.....+.....+++|+|+.+++++++...
T Consensus 162 ~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 235 (249)
T PRK12827 162 ASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT------EHLLNPVPVQRLGEPDEVAALVAFLVSDAAS 235 (249)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH------HHHHhhCCCcCCcCHHHHHHHHHHHcCcccC
Confidence 99999999999999999877 9999999999999986543211 1111222334556899999999999977544
Q ss_pred e
Q 039397 263 Y 263 (349)
Q Consensus 263 ~ 263 (349)
+
T Consensus 236 ~ 236 (249)
T PRK12827 236 Y 236 (249)
T ss_pred C
Confidence 3
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=221.04 Aligned_cols=205 Identities=20% Similarity=0.198 Sum_probs=160.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------------ccCCCc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------------KESKAV 111 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------------~~~g~i 111 (349)
|++|+++||||++|||++++++|+++|++|++++|+.++.. . ..++.+|. .+.+++
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---------~--~~~~~~D~~~~~~~~~~~~~~~~~~~~ 69 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF---------P--GELFACDLADIEQTAATLAQINEIHPV 69 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc---------C--ceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999999999999999999875410 0 12345551 112368
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|++|||||.....++.+. +.+++++.+++|+.+++.++++++|.|++++ |+||++||.. ..+.++...|+++|++++
T Consensus 70 d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~ 147 (234)
T PRK07577 70 DAIVNNVGIALPQPLGKI-DLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALV 147 (234)
T ss_pred cEEEECCCCCCCCChHHC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHH
Confidence 999999999877777665 4688999999999999999999999997554 8999999986 457788899999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+++++++.|++++ |++++|+||+++|++.......... .........+..+..+|+|+|+.++++++++..+
T Consensus 148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~ 220 (234)
T PRK07577 148 GCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSE-EEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGF 220 (234)
T ss_pred HHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchh-HHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCC
Confidence 9999999999887 9999999999999987543211111 0011111223445678999999999999876444
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-29 Score=221.69 Aligned_cols=216 Identities=25% Similarity=0.275 Sum_probs=175.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEecc--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLNN--------------KE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~ 107 (349)
+++.+|+++||||++|||.+++++|+++|++|+++ +|+.++.++....+......+..+.+|. +.
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999 9988877766665544445677788872 23
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
++++|++|||||.....+..+. +.+++++++++|+.++++++++++|.++++ .+++|++||..+..+.+....|+++|
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK 159 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDM-TDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK 159 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence 4689999999998865555554 468899999999999999999999998765 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
++++.++++++.++... +++++++||+++|++.+...... ...+. ...+..+..+++++|+.++++++.....
T Consensus 160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~va~~~~~l~~~~~~~ 233 (247)
T PRK05565 160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED---KEGLA-EEIPLGRLGKPEEIAKVVLFLASDDASY 233 (247)
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH---HHHHH-hcCCCCCCCCHHHHHHHHHHHcCCccCC
Confidence 99999999999999877 99999999999999876532110 11111 1223345679999999999999876543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=219.10 Aligned_cols=205 Identities=21% Similarity=0.248 Sum_probs=171.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
.+.+|+++||||+|+||.+++++|+++|++|++++|+++++++...++... ..+..+.+| .+.++
T Consensus 3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999999988877776666433 457777777 22357
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|++|||||....+.+.+. +.+++++++++|+.+++.+++++++.|+++.|+||++||.++..+.++...|+++|+++
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~ 160 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEEL-TPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGL 160 (237)
T ss_pred CCCEEEECCCCCCCCchhhC-CHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHH
Confidence 89999999998776666665 45889999999999999999999999865668999999999988888899999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+++++.++.|++.. +++++++||++.|++........ .....+++|+|+.++++++.+...
T Consensus 161 ~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-------------~~~~~~~~d~a~~~~~~l~~~~~~ 222 (237)
T PRK07326 161 VGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-------------DAWKIQPEDIAQLVLDLLKMPPRT 222 (237)
T ss_pred HHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-------------hhccCCHHHHHHHHHHHHhCCccc
Confidence 99999999999877 99999999999998764321100 112478999999999999887543
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=221.18 Aligned_cols=211 Identities=28% Similarity=0.336 Sum_probs=160.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch--hhhHHHHhcCCC-CeEEEEEec---------------c
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR--LQGSTIDEYNPI-NEVTLVSLN---------------N 105 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~--l~~~~~~~~~~~-~~~~~~~~d---------------~ 105 (349)
++++|+++||||++|||+++|++|+++|++|+++.|+.+. .++..+.....+ .......+| .
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999888765 333332222111 245555555 2
Q ss_pred ccCCCcceeeecCcCCCCc-cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCc-hhhH
Q 039397 106 KESKAVDHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRM-SLYA 183 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~-~~Y~ 183 (349)
+.+|++|++|||||+.... ++.+.+ .++|++++++|+.|++.+++.+.|+|+++ +||++||+.+. +.++. ++|+
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~-~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~Iv~isS~~~~-~~~~~~~~Y~ 157 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELT-EEDWDRVIDVNLLGAFLLTRAALPLMKKQ--RIVNISSVAGL-GGPPGQAAYA 157 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCC-HHHHHHHHHHhHHHHHHHHHHHHHhhhhC--eEEEECCchhc-CCCCCcchHH
Confidence 3468899999999998874 777764 58999999999999999999888888844 99999999999 88874 9999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
+||+|+++|+++++.|+.++ |++++|+||+++|++.......... .........+..+...|+++++.+.++...
T Consensus 158 ~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (251)
T COG1028 158 ASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELE-ALKRLAARIPLGRLGTPEEVAAAVAFLASD 233 (251)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhh-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999999999888 9999999999999988754322100 000000000222555677777777765544
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=227.96 Aligned_cols=209 Identities=21% Similarity=0.179 Sum_probs=158.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~ 106 (349)
.+++||+++||||++|||+++|++|+++|++|++++|+.++.++...++.. ....+.++.+| .+
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 468899999999999999999999999999999999998877765555521 23457778888 23
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccccc-----------
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWL----------- 174 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~----------- 174 (349)
.++++|+||||||+.... .+. +.++++..+++|+.|++.+++.++|.|++. +++||++||.++..
T Consensus 92 ~~~~iD~li~nAg~~~~~--~~~-~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~ 168 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTP--KQT-TADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQW 168 (306)
T ss_pred hCCCCCEEEECCccccCC--Ccc-CCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCc
Confidence 467899999999986543 222 347789999999999999999999999765 47999999987543
Q ss_pred --CCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEE--ecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHH
Q 039397 175 --PLPRMSLYASAKAALVTFYESLRFELNDE-VGITIA--THGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDF 249 (349)
Q Consensus 175 --~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v--~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv 249 (349)
+.++...|++||+|++.|++.++.|++.+ ++|+++ +||+++|++.+..... .........+ ....++++.
T Consensus 169 ~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~----~~~~~~~~~~-~~~~~~~~g 243 (306)
T PRK06197 169 ERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA----LRPVATVLAP-LLAQSPEMG 243 (306)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH----HHHHHHHHHh-hhcCCHHHH
Confidence 23456789999999999999999999776 666655 6999999987653110 1111111111 124577888
Q ss_pred HHHHHHHHhc
Q 039397 250 ARLIVSGACR 259 (349)
Q Consensus 250 A~~i~~l~~~ 259 (349)
+..+++++.+
T Consensus 244 ~~~~~~~~~~ 253 (306)
T PRK06197 244 ALPTLRAATD 253 (306)
T ss_pred HHHHHHHhcC
Confidence 8777777654
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=222.46 Aligned_cols=212 Identities=15% Similarity=0.117 Sum_probs=167.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
+|+++||||++|||++++++|+++|++|++++|+.++++....++. ...+..+.+| .+.++++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999999999999888777666552 2356677777 23346899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
++|||||.....++.+. +.++|++.+++|+.+++.+++++++.++++ .|+||++||..+..+ .+.+.|+++|+++++
T Consensus 80 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~ 157 (257)
T PRK07074 80 VLVANAGAARAASLHDT-TPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH 157 (257)
T ss_pred EEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence 99999998766666554 568899999999999999999999998654 489999999876543 466789999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
++++++.|++++ |+|++++||+++|++.......... .........+..+...++|+|+++++++++...+
T Consensus 158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 229 (257)
T PRK07074 158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQ-VFEELKKWYPLQDFATPDDVANAVLFLASPAARA 229 (257)
T ss_pred HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcC
Confidence 999999999987 9999999999999976432211111 1111112234567899999999999999865443
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=240.66 Aligned_cols=212 Identities=21% Similarity=0.224 Sum_probs=169.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc--chhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE--NRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~--~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.++||+++||||++|||++++++|+++|++|++++|.. +++++...++ ....+.+| .+.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999853 3333333332 12345566 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccc-cCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLH-ESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~-~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
++++|++|||||+.....+.+. +.++|++++++|+.|++++.+++++.+. +.+|+||++||.++..+.+++..|+++|
T Consensus 282 ~g~id~vi~~AG~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asK 360 (450)
T PRK08261 282 HGGLDIVVHNAGITRDKTLANM-DEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASK 360 (450)
T ss_pred CCCCCEEEECCCcCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHH
Confidence 6789999999999877776665 5689999999999999999999999643 3458999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++++|+++++.|++++ |++|+|+||+++|++....... ..+.........+...|+|+|+++.+++++...+++
T Consensus 361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~----~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~it 436 (450)
T PRK08261 361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA----TREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVT 436 (450)
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh----HHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCC
Confidence 99999999999999987 9999999999999987542110 011112223345667899999999999988766654
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=221.91 Aligned_cols=212 Identities=22% Similarity=0.221 Sum_probs=166.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc-hhhhHHHHhcCCCCeEEEEEec--------------cccCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-RLQGSTIDEYNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~-~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
.|+++||||++|||.+++++|+++|++|++++|+.+ ..++..+.+.....++.++.+| .+.++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 479999999999999999999999999999998753 3444444443334467788888 2335789
Q ss_pred ceeeecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-------CCeEEEEeccccccCCCCchhh
Q 039397 112 DHLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-------NGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 112 DvlVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------~g~IV~isS~~~~~~~~~~~~Y 182 (349)
|++|||||.... .++.+. +.+++++++++|+.+++++++++.+.|+++ .++||++||..+..+.++.+.|
T Consensus 82 d~vi~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 160 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDL-TPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY 160 (256)
T ss_pred CEEEECCccCCCCCCChhhC-CHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence 999999998543 345454 458899999999999999999999998643 2569999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++||+++++++++++.|+.++ +++++++||+++|++........ .........+..+..+|+|+|+++.++++...
T Consensus 161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~ 237 (256)
T PRK12745 161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKY---DALIAKGLVPMPRWGEPEDVARAVAALASGDL 237 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhH---HhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcc
Confidence 999999999999999999877 99999999999998765421111 00011112234567789999999999997654
Q ss_pred c
Q 039397 262 T 262 (349)
Q Consensus 262 ~ 262 (349)
.
T Consensus 238 ~ 238 (256)
T PRK12745 238 P 238 (256)
T ss_pred c
Confidence 3
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=208.60 Aligned_cols=195 Identities=22% Similarity=0.298 Sum_probs=155.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEe-cCcchhhhHHHHhcCCCCeEEEEEecc----------------cc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR-KANLVLVA-RRENRLQGSTIDEYNPINEVTLVSLNN----------------KE 107 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~-r~~~~l~~~~~~~~~~~~~~~~~~~d~----------------~~ 107 (349)
.-|.++||||++|||..++++|.+. |-++++.. |+.++..+..++......+++.++.|. -.
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg 81 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG 81 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence 4567999999999999999999974 77776655 446664333333333456788888771 12
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC------------CeEEEEeccccccC
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN------------GRVVVNASVENWLP 175 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------------g~IV~isS~~~~~~ 175 (349)
..++|+|+||||+.........++.+.|.+.+++|..|++.++|+++|++++.. +.|||+||..+..+
T Consensus 82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~ 161 (249)
T KOG1611|consen 82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG 161 (249)
T ss_pred cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence 457999999999987766655556678999999999999999999999996532 37999998887643
Q ss_pred ---CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHH
Q 039397 176 ---LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFAR 251 (349)
Q Consensus 176 ---~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~ 251 (349)
..++.+|..||+|++.|+|+++.||++. |-|..+|||||+|+|.... ...++|+-+.
T Consensus 162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~-------------------a~ltveeSts 222 (249)
T KOG1611|consen 162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK-------------------AALTVEESTS 222 (249)
T ss_pred CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC-------------------cccchhhhHH
Confidence 3457899999999999999999999988 9999999999999998742 4667888888
Q ss_pred HHHHHHhc
Q 039397 252 LIVSGACR 259 (349)
Q Consensus 252 ~i~~l~~~ 259 (349)
.++..+.+
T Consensus 223 ~l~~~i~k 230 (249)
T KOG1611|consen 223 KLLASINK 230 (249)
T ss_pred HHHHHHHh
Confidence 88887765
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=218.63 Aligned_cols=213 Identities=17% Similarity=0.195 Sum_probs=168.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc--------cCCCcceeeecC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK--------ESKAVDHLVNTA 118 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~--------~~g~iDvlVnnA 118 (349)
+|+++||||+||||++++++|+++|++|++++|+.+..++...........+..+.+|.. ..+++|++||||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 579999999999999999999999999999999987766665554333445677777732 124899999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLR 197 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la 197 (349)
|....++..+. +.+++++.+++|+.+++.+++.+++.|++++ |+||++||..+..+.++...|++||++++++++.++
T Consensus 82 g~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~ 160 (257)
T PRK09291 82 GIGEAGAVVDI-PVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMH 160 (257)
T ss_pred CcCCCcCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHH
Confidence 99877777775 5688999999999999999999999986554 899999999999888999999999999999999999
Q ss_pred HHhcCC-eeEEEEecCcccCCCCCCccccccc---hhhh-hH-HHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 198 FELNDE-VGITIATHGWIGIEMTKGKFMLEDG---AEMQ-WK-EEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 198 ~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~---~~~~-~~-~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.|+.+. |++++++||++.|++.......... .... .. ..........+++|+++.++.++.++
T Consensus 161 ~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (257)
T PRK09291 161 AELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPAD 229 (257)
T ss_pred HHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCC
Confidence 999877 9999999999999876432211000 0000 01 01111224478999999999988754
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=218.61 Aligned_cols=212 Identities=20% Similarity=0.219 Sum_probs=165.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
|+++||||+||||++++++|+++|++|+++ .|+.++.++...++...+..+..+.+| .+.++++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 689999999999999999999999999874 677766666665554444457778887 23468999
Q ss_pred eeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCCc-hhhHHHH
Q 039397 113 HLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPRM-SLYASAK 186 (349)
Q Consensus 113 vlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~~-~~Y~asK 186 (349)
++|||||.... ....+. +.++++.++++|+.+++.+++++++.|.++ +|++|++||..+..+.++. ..|+++|
T Consensus 82 ~vi~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK 160 (247)
T PRK09730 82 ALVNNAGILFTQCTVENL-TAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK 160 (247)
T ss_pred EEEECCCCCCCCCccccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence 99999998643 334443 567899999999999999999999998653 4789999999998887764 6899999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+++++++++++.|+.++ |++++++||++.|++...... .. .........+..+..+++|+|+.+++++++...+
T Consensus 161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~ 235 (247)
T PRK09730 161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE--PG-RVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASY 235 (247)
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC--HH-HHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcC
Confidence 99999999999999877 999999999999997543211 10 1111111223345668999999999999875443
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=221.19 Aligned_cols=209 Identities=20% Similarity=0.158 Sum_probs=160.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEecc--------------ccCC--C
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLNN--------------KESK--A 110 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g--~ 110 (349)
|+++||||+||||++++++|+++|++|++++|++ +.+++.... ...++..+.+|. +..+ .
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ---YNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc---cCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 6899999999999999999999999999999987 344333222 234567778882 1122 1
Q ss_pred c--ceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHH
Q 039397 111 V--DHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 111 i--DvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
+ +++|||||...+ .++.+. +.++|++.+++|+.+++.++++++|+|++. .|+||++||..+..+.++...|+++
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 157 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKA-ESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSS 157 (251)
T ss_pred CCceEEEEcceecccCcccccC-CHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHH
Confidence 2 289999998644 445554 568999999999999999999999999764 3799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC--C-eeEEEEecCcccCCCCCCccccccchh--hhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 186 KAALVTFYESLRFELND--E-VGITIATHGWIGIEMTKGKFMLEDGAE--MQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 186 Kaal~~l~~~la~el~~--~-I~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|+|++++++.++.|++. . |+|++|+||+++|++............ ........+..+..+|||+|+.++++++++
T Consensus 158 Kaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 237 (251)
T PRK06924 158 KAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE 237 (251)
T ss_pred HHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc
Confidence 99999999999999853 3 999999999999998543211111100 111111223457899999999999999874
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-28 Score=217.21 Aligned_cols=215 Identities=24% Similarity=0.269 Sum_probs=173.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g 109 (349)
++++|+++||||+|+||++++++|+++|++|++++|+.+++.+...++.....++..+.+|. +..+
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999999998777766666644445577788882 2346
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccc-cCCCCchhhHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENW-LPLPRMSLYASAKA 187 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~-~~~~~~~~Y~asKa 187 (349)
++|++|||||.....++.+. +.+++++.+++|+.+++.++++++|.|.++ .++||++||..+. .+.++.+.|+++|+
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~ 161 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEM-DDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKA 161 (251)
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHH
Confidence 89999999998877666665 458899999999999999999999998654 4899999999988 78888999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+++++++.++.++... ++++.+.||.+.|+......... .........+.....+++|+|+.+++++.....
T Consensus 162 a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 234 (251)
T PRK12826 162 GLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ---WAEAIAAAIPLGRLGEPEDIAAAVLFLASDEAR 234 (251)
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999999999877 99999999999999765432110 011111122344678999999999999876543
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-28 Score=224.61 Aligned_cols=215 Identities=16% Similarity=0.124 Sum_probs=158.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||++|||++++++|+++|++|++++|+.+++++...++......+.++.+| .+..
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 35678999999999999999999999999999999999988877776664334467778888 1234
Q ss_pred CCcceeeecCcCCCCc-cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC---CeEEEEecccccc----------
Q 039397 109 KAVDHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN---GRVVVNASVENWL---------- 174 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---g~IV~isS~~~~~---------- 174 (349)
+++|+||||||+.... ...+. +.++++.++++|+.|+++++++++|.|++++ ++||++||.....
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~ 160 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLR-SPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP 160 (322)
T ss_pred CCccEEEECCcccCCCCCCCCC-CHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence 6799999999986432 22233 4578999999999999999999999997654 5999999976432
Q ss_pred -------------------------CCCCchhhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcc-cCCCCCCccccc
Q 039397 175 -------------------------PLPRMSLYASAKAALVTFYESLRFELND-E-VGITIATHGWI-GIEMTKGKFMLE 226 (349)
Q Consensus 175 -------------------------~~~~~~~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v-~T~~~~~~~~~~ 226 (349)
+.....+|+.||.+.+.+++.++.++.. + |+|++++||.| .|++.+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~ 240 (322)
T PRK07453 161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLF 240 (322)
T ss_pred CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHH
Confidence 1123468999999999999999999953 4 99999999999 588865421100
Q ss_pred cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 227 DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
. ...............++++.|+.++.++.+.
T Consensus 241 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (322)
T PRK07453 241 Q--KLFPWFQKNITGGYVSQELAGERVAQVVADP 272 (322)
T ss_pred H--HHHHHHHHHHhhceecHHHHhhHHHHhhcCc
Confidence 0 0000001111123456777777777766543
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=217.56 Aligned_cols=207 Identities=21% Similarity=0.173 Sum_probs=158.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc-hhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-RLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~-~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++|+++||||+||||++++++|+++|++|++++|+.+ .++....++...+.++..+.+| .+.+
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999999999999764 4444444443334456777777 2334
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-----cCCCCchhhH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-----LPLPRMSLYA 183 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-----~~~~~~~~Y~ 183 (349)
+++|++|||||..... + .+++..+++|+.|++++++++.|+|.+ +|+||++||..+. .+.+....|+
T Consensus 83 ~~~d~vi~~ag~~~~~------~-~~~~~~~~vn~~~~~~l~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~~~~Y~ 154 (248)
T PRK07806 83 GGLDALVLNASGGMES------G-MDEDYAMRLNRDAQRNLARAALPLMPA-GSRVVFVTSHQAHFIPTVKTMPEYEPVA 154 (248)
T ss_pred CCCcEEEECCCCCCCC------C-CCcceeeEeeeHHHHHHHHHHHhhccC-CceEEEEeCchhhcCccccCCccccHHH
Confidence 6899999999864221 1 224578899999999999999999954 5799999996553 2345567899
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+||++++.++++++.|++++ |+|++++||++.|++.......... ......+.+..+..+|+|+|++++++++.+
T Consensus 155 ~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 230 (248)
T PRK07806 155 RSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNP--GAIEARREAAGKLYTVSEFAAEVARAVTAP 230 (248)
T ss_pred HHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCH--HHHHHHHhhhcccCCHHHHHHHHHHHhhcc
Confidence 99999999999999999988 9999999999999875432211111 111122345568999999999999999854
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=213.89 Aligned_cols=214 Identities=23% Similarity=0.232 Sum_probs=170.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEecc--------------ccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLNN--------------KES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d~--------------~~~ 108 (349)
++++|+++||||+||||++++++|+++|++|+++.|+.++ .+....++......+..+.+|. +.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999888887653 4444444433345677777772 234
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||........+. +.+.+++++++|+.+++.+.+++++.+.+.+ +++|++||..+..+.++...|+++|+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~ 160 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRM-KEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKA 160 (248)
T ss_pred CCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHH
Confidence 689999999998776666664 4588999999999999999999999986543 79999999999889999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+++++++.++.+++.. +++++++||+++|++...... . .........+.....+++|+|+.+.+++.....
T Consensus 161 a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~ 232 (248)
T PRK05557 161 GVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE---D-VKEAILAQIPLGRLGQPEEIASAVAFLASDEAA 232 (248)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh---H-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccC
Confidence 9999999999999877 999999999999988654311 0 111111222344578999999999999876443
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=213.75 Aligned_cols=208 Identities=23% Similarity=0.214 Sum_probs=169.1
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|.+.+++|+++||||+|+||++++++|+++|++|++++|+.++..+...++... ....+.+| .+
T Consensus 1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 78 (239)
T PRK12828 1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNR 78 (239)
T ss_pred CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999987766555444322 24455566 23
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.++++|++|||||........+. +.+++++.+++|+.+++.++++++|.|+++ .++||++||..+..+.++...|+++
T Consensus 79 ~~~~~d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s 157 (239)
T PRK12828 79 QFGRLDALVNIAGAFVWGTIADG-DADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAA 157 (239)
T ss_pred HhCCcCEEEECCcccCcCChhhC-CHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHH
Confidence 46789999999998765555554 458899999999999999999999998654 4899999999999988999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|++++.++++++.++... ++++.+.||++.|++....... ......++++|+|+.+++++++...+
T Consensus 158 k~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~------------~~~~~~~~~~dva~~~~~~l~~~~~~ 224 (239)
T PRK12828 158 KAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD------------ADFSRWVTPEQIAAVIAFLLSDEAQA 224 (239)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc------------hhhhcCCCHHHHHHHHHHHhCccccc
Confidence 999999999999999877 9999999999999864432110 11224678999999999999876443
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=213.13 Aligned_cols=212 Identities=22% Similarity=0.190 Sum_probs=165.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcC-CCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYN-PINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~-~~~~~~~~~~d--------------~~~ 107 (349)
.+++|+++||||+||||++++++|+++|++|++++|+. +.+++....+.. ....+..+.+| .+.
T Consensus 3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35679999999999999999999999999999999964 344444444422 22346677777 223
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
.+++|++|||||.....++.+. +.++++.++++|+.|++++++++.|.+.+++|.+++++|..+..+.++...|++||+
T Consensus 83 ~~~~d~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 161 (249)
T PRK09135 83 FGRLDALVNNASSFYPTPLGSI-TEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKA 161 (249)
T ss_pred cCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHH
Confidence 5689999999998766666554 457899999999999999999999999777789999999888888889999999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
+++.+++.++.|+.+.++++++.||++.|++....+... .........+.....+++|+|+++.+++.+
T Consensus 162 ~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~ 230 (249)
T PRK09135 162 ALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEE---ARQAILARTPLKRIGTPEDIAEAVRFLLAD 230 (249)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHH---HHHHHHhcCCcCCCcCHHHHHHHHHHHcCc
Confidence 999999999999976699999999999999864322111 111111122234556899999999888764
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=243.00 Aligned_cols=216 Identities=22% Similarity=0.256 Sum_probs=177.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
..++||+++||||+||||++++++|+++|++|++++|+.++++.....+... ..+..+.+| .+.+
T Consensus 418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999999998887776665433 467777787 2346
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|++|||||.....++.+. +.++|++.+++|+.|++.+++++.+.|+++ +|+||++||..+..+.++...|++||
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asK 575 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEET-SDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAK 575 (681)
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHH
Confidence 789999999999888877776 568999999999999999999999999764 38999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcc--cCCCCCCccccc--------cchhhhhHHHHhhhcCCCCHHHHHHHHHH
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWI--GIEMTKGKFMLE--------DGAEMQWKEEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v--~T~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~edvA~~i~~ 255 (349)
+++++++++++.|++++ |+||+++||.+ +|++........ ...............+.+.++|+|+++++
T Consensus 576 aa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~ 655 (681)
T PRK08324 576 AAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVF 655 (681)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHH
Confidence 99999999999999988 99999999999 888765322100 00000112223345678899999999999
Q ss_pred HHhcC
Q 039397 256 GACRG 260 (349)
Q Consensus 256 l~~~~ 260 (349)
+++..
T Consensus 656 l~s~~ 660 (681)
T PRK08324 656 LASGL 660 (681)
T ss_pred HhCcc
Confidence 98643
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=219.72 Aligned_cols=211 Identities=22% Similarity=0.222 Sum_probs=168.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEec--------------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVTLVSLN-------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d-------------- 104 (349)
...++.+++++||||++|||+++|++|+++|++|++.+|+.++.++...++. .....+.+.++|
T Consensus 29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~ 108 (314)
T KOG1208|consen 29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF 108 (314)
T ss_pred ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 3557899999999999999999999999999999999999999888888883 445667788999
Q ss_pred cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccC--------
Q 039397 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLP-------- 175 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~-------- 175 (349)
....+++|+||||||+..... .. ..|.++..|.+|+.|++.+++.++|.|+++. +|||++||..+...
T Consensus 109 ~~~~~~ldvLInNAGV~~~~~--~~-t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~ 185 (314)
T KOG1208|consen 109 KKKEGPLDVLINNAGVMAPPF--SL-TKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSG 185 (314)
T ss_pred HhcCCCccEEEeCcccccCCc--cc-CccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccc
Confidence 456789999999999987665 32 3478999999999999999999999998766 89999999886110
Q ss_pred -----CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCC-CCCCccccccchhhhhHHHHhhhcCCCCHHHH
Q 039397 176 -----LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE-MTKGKFMLEDGAEMQWKEEREVHVAGGPVEDF 249 (349)
Q Consensus 176 -----~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv 249 (349)
+....+|+.||-+...+++.|++.+...|.+++++||.+.|+ +.+.. . ...+....-.....-++++-
T Consensus 186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~-----~-~~~~l~~~l~~~~~ks~~~g 259 (314)
T KOG1208|consen 186 EKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVN-----L-LLRLLAKKLSWPLTKSPEQG 259 (314)
T ss_pred hhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecch-----H-HHHHHHHHHHHHhccCHHHH
Confidence 223346999999999999999999987799999999999999 55411 0 11111111111122478899
Q ss_pred HHHHHHHHhcC
Q 039397 250 ARLIVSGACRG 260 (349)
Q Consensus 250 A~~i~~l~~~~ 260 (349)
|+..++++.++
T Consensus 260 a~t~~~~a~~p 270 (314)
T KOG1208|consen 260 AATTCYAALSP 270 (314)
T ss_pred hhheehhccCc
Confidence 99988888775
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=213.90 Aligned_cols=205 Identities=17% Similarity=0.134 Sum_probs=156.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc------------------ccCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN------------------KESK 109 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~------------------~~~g 109 (349)
++++||||+||||++++++|+++|++|++++|+.++.. ....+.++..+.+|. ...+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 37999999999999999999999999999999865421 111234567777771 1124
Q ss_pred CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 110 AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 110 ~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++|++|||||.... .+..+. +.+++++.+++|+.|++.+++.+++.|.++ .|+||++||..+..+.++...|+++|+
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 155 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATL-DAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKA 155 (243)
T ss_pred CceEEEEcCcccCCCCccccC-CHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHH
Confidence 79999999998654 344443 568899999999999999999999998754 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc--hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG--AEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
+++++++.++.| .+. |++++|+||+++|++.......... ..........+..+..+|+|+|+.++..+..
T Consensus 156 a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~ 229 (243)
T PRK07023 156 ALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLS 229 (243)
T ss_pred HHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhc
Confidence 999999999999 665 9999999999999975421110000 0001112223456788999999966555544
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-29 Score=203.04 Aligned_cols=211 Identities=18% Similarity=0.206 Sum_probs=174.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
..+|-+++||||.+|+|++.|++|+++|+.|++.+--.++-++.++++ +.++.+.+.| ..++|
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 457889999999999999999999999999999999988888888776 4567787777 56789
Q ss_pred CcceeeecCcCCCCcccc-----ccCCcchHHHHHHhHhhhhHHHHHHhcccccc-------CCCeEEEEeccccccCCC
Q 039397 110 AVDHLVNTASLGHTFFFE-----EVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-------SNGRVVVNASVENWLPLP 177 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~-----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~~g~IV~isS~~~~~~~~ 177 (349)
++|.+|||||+....... ..-+.|++++++++|+.|+|++++.-.-.|-+ ++|.|||..|++++-+.-
T Consensus 83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~ 162 (260)
T KOG1199|consen 83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT 162 (260)
T ss_pred ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc
Confidence 999999999986432211 11256899999999999999999999888842 238999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 178 RMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 178 ~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
++++|++||+|+.+++--++++++.. ||++.|.||..+||+.....+.. ........+...+...|.|-|..+-..
T Consensus 163 gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv---~~fla~~ipfpsrlg~p~eyahlvqai 239 (260)
T KOG1199|consen 163 GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKV---KSFLAQLIPFPSRLGHPHEYAHLVQAI 239 (260)
T ss_pred chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHH---HHHHHHhCCCchhcCChHHHHHHHHHH
Confidence 99999999999999999999999999 99999999999999987642211 111223334455788899999888888
Q ss_pred HhcC
Q 039397 257 ACRG 260 (349)
Q Consensus 257 ~~~~ 260 (349)
+++.
T Consensus 240 ienp 243 (260)
T KOG1199|consen 240 IENP 243 (260)
T ss_pred HhCc
Confidence 7763
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=211.33 Aligned_cols=214 Identities=23% Similarity=0.300 Sum_probs=173.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g 109 (349)
+|.+|+++||||+|+||.+++++|+++|++|++++|++++.+....++...+.+...+.+|. +..+
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 66789999999999999999999999999999999998887776666654455677777872 2347
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|++|||||.....+..+. +.++++..+++|+.+.+++++++.|+|.+.+ ++||++||..+..+.+....|+.+|++
T Consensus 82 ~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~ 160 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRM-SEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAG 160 (246)
T ss_pred CCCEEEECCCcCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHH
Confidence 88999999998776666554 4578999999999999999999999986554 899999999988888889999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++.++++++.++.+. +++++++||.+.+++...... . .........+.....+++|+|+.+.++++....
T Consensus 161 ~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~ 231 (246)
T PRK05653 161 VIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPE---E-VKAEILKEIPLGRLGQPEEVANAVAFLASDAAS 231 (246)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhH---H-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 999999999999877 999999999999987653110 0 001111122335678899999999999976443
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=202.65 Aligned_cols=149 Identities=30% Similarity=0.400 Sum_probs=133.9
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecC--cchhhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARR--ENRLQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~--~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
|+++||||++|||++++++|+++|+ +|++++|+ .+..+++..++.....++..+++| .+.+++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7899999999999999999999965 78889998 667777777775555788999999 345689
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
+|++|||||....+.+.+. +.++|++++++|+.+++++.++++| +++|+||++||.++..+.|+++.|+++|+|++
T Consensus 81 ld~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~---~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~ 156 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDL-SEEELERVFRVNLFGPFLLAKALLP---QGGGKIVNISSIAGVRGSPGMSAYSASKAALR 156 (167)
T ss_dssp ESEEEEECSCTTSBSGGGS-HHHHHHHHHHHHTHHHHHHHHHHHH---HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHH
T ss_pred ccccccccccccccccccc-cchhhhhccccccceeeeeeehhee---ccccceEEecchhhccCCCCChhHHHHHHHHH
Confidence 9999999999987777776 5699999999999999999999999 56899999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 039397 191 TFYESLRFEL 200 (349)
Q Consensus 191 ~l~~~la~el 200 (349)
+|+++++.|+
T Consensus 157 ~~~~~la~e~ 166 (167)
T PF00106_consen 157 GLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999997
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-27 Score=209.08 Aligned_cols=213 Identities=22% Similarity=0.266 Sum_probs=169.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEecc--------------ccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLNN--------------KES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d~--------------~~~ 108 (349)
++++|+++||||+|+||++++++|+++|++|+++.|+..+ .+.....+......+..+.+|. +..
T Consensus 3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 4567899999999999999999999999999887766543 3344444433344677788872 234
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|++|||||......+.+. +.+++++.+++|+.+++++++.+++++++.+ +++|++||..+..+.++...|+.+|+
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~ 161 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADM-SDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKA 161 (249)
T ss_pred CCCCEEEECCccCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHH
Confidence 689999999998776666665 4578999999999999999999999986554 89999999999988889999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+++++++.++.|+.+. ++++.++||.+.|++.......... ......+..+..+++|+|+.+.+++++..
T Consensus 162 ~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 232 (249)
T PRK12825 162 GLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEARE----AKDAETPLGRSGTPEDIARAVAFLCSDAS 232 (249)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHH----hhhccCCCCCCcCHHHHHHHHHHHhCccc
Confidence 9999999999999877 9999999999999987653211110 00112334567899999999999997754
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-27 Score=208.11 Aligned_cols=206 Identities=25% Similarity=0.261 Sum_probs=163.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~g 109 (349)
++++|+++||||++|||.++++.|+++|++|++++|+++++++...++... ..+..+.+|. ..++
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLN 80 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999999999999988777665554322 2567778872 2357
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-cCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-LPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-~~~~~~~~Y~asKaa 188 (349)
++|.+|+|+|........+ .+++++++++|+.+++++.+.++|+|.+ +|++|++||..+. .+.+....|++||++
T Consensus 81 ~id~ii~~ag~~~~~~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~ 156 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEE---FSGLEEMLTNHIKIPLYAVNASLRFLKE-GSSIVLVSSMSGIYKASPDQLSYAVAKAG 156 (238)
T ss_pred CCCEEEEcCCCcCCCchHH---HHHHHHHHHHhchHHHHHHHHHHHHHhc-CCEEEEEecchhcccCCCCchHHHHHHHH
Confidence 7999999999765443332 3778999999999999999999999854 5899999998774 366778899999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
++.++++++.|+..+ |++++++||++.|++.... .+...........+++|+|+.+++++++...+
T Consensus 157 ~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~---------~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~ 223 (238)
T PRK05786 157 LAKAVEILASELLGRGIRVNGIAPTTISGDFEPER---------NWKKLRKLGDDMAPPEDFAKVIIWLLTDEADW 223 (238)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh---------hhhhhccccCCCCCHHHHHHHHHHHhcccccC
Confidence 999999999999877 9999999999999864321 01111111224678999999999999865443
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=212.42 Aligned_cols=216 Identities=23% Similarity=0.228 Sum_probs=167.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
..++++|+++||||+||||++++++|+++|++|++++|+.+.+++..++.... .+..+.+| .+.
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999987776655544222 45667777 123
Q ss_pred CCCcceeeecCcCC-CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccCCCCchhhHH
Q 039397 108 SKAVDHLVNTASLG-HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 108 ~g~iDvlVnnAg~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.+++|++|||||.. ........ +.+++++++++|+.+++++++++++.|.+.+ ++|+++||.++..+.+....|++
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~ 162 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEI-TPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAA 162 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHH
Confidence 47899999999987 44444444 4588999999999999999999999875432 67999999999889999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc----cchhhhh-H--HHHhhhcCCCCHHHHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE----DGAEMQW-K--EEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~-~--~~~~~~~~~~~~edvA~~i~~l 256 (349)
+|++++.+++.++.++... ++++++.||++.|++........ ....... . ....+..+..+++|+|+++.++
T Consensus 163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l 242 (264)
T PRK12829 163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFL 242 (264)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999766 99999999999999865432110 0000000 0 1112334578999999999999
Q ss_pred HhcC
Q 039397 257 ACRG 260 (349)
Q Consensus 257 ~~~~ 260 (349)
+++.
T Consensus 243 ~~~~ 246 (264)
T PRK12829 243 ASPA 246 (264)
T ss_pred cCcc
Confidence 8754
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-27 Score=206.71 Aligned_cols=188 Identities=19% Similarity=0.187 Sum_probs=149.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc------------ccCCCcceee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN------------KESKAVDHLV 115 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~------------~~~g~iDvlV 115 (349)
|+++||||++|||++++++|+++|++|++++|+.++.++... . ..+....+|. -..+++|++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 789999999999999999999999999999999876554322 1 1344555561 1125799999
Q ss_pred ecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC---CCchhhHHHHHHHH
Q 039397 116 NTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL---PRMSLYASAKAALV 190 (349)
Q Consensus 116 nnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~---~~~~~Y~asKaal~ 190 (349)
||||+... .++.+. +.+++++.+++|+.+++.++++++|.|+++.|+|+++||..+..+. .....|+++|++++
T Consensus 77 ~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~ 155 (225)
T PRK08177 77 VNAGISGPAHQSAADA-TAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALN 155 (225)
T ss_pred EcCcccCCCCCCcccC-CHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHH
Confidence 99998643 234444 4588999999999999999999999997666899999998776543 35678999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.++++++.|++++ |+||+|+||+++|++.... ...++++.++.++..+.+.
T Consensus 156 ~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~-------------------~~~~~~~~~~~~~~~~~~~ 207 (225)
T PRK08177 156 SMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN-------------------APLDVETSVKGLVEQIEAA 207 (225)
T ss_pred HHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC-------------------CCCCHHHHHHHHHHHHHhC
Confidence 9999999999888 9999999999999986432 1245677777777766554
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-27 Score=209.80 Aligned_cols=213 Identities=22% Similarity=0.246 Sum_probs=168.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
+|++|||||+|+||++++++|+++|++|++++|+.+..++...++.....++..+.+| .+..+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999999999999999999887777666554334567777877 22356799
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
++|||||........+. +.+++++++++|+.|++.+++++++.|++.+ +++|++||..+..+.++...|+++|+++++
T Consensus 81 ~vi~~a~~~~~~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~ 159 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEF-PPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG 159 (255)
T ss_pred EEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence 99999998766555554 4578899999999999999999999986544 899999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc---cchh--hhh---HHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE---DGAE--MQW---KEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~---~~~~--~~~---~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+++.++.++... ++++.++||++.|++........ .... ... ...........+++|+|+++++++++.
T Consensus 160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 237 (255)
T TIGR01963 160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDA 237 (255)
T ss_pred HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcc
Confidence 999999999877 99999999999998754321100 0000 000 011112345789999999999999763
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-26 Score=201.33 Aligned_cols=202 Identities=25% Similarity=0.226 Sum_probs=163.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc----------ccCCCcceeee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN----------KESKAVDHLVN 116 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~----------~~~g~iDvlVn 116 (349)
.|+++||||+|+||++++++|+++ ++|++++|+.++.++...+. ..+.++.+|. +..+++|++||
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 579999999999999999999999 99999999987665544332 2355667772 23357999999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESL 196 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~l 196 (349)
+||.....+..+. +.+++++++++|+.+.+.+++.+++.|+++.+++|++||..+..+.++...|+++|++++++++.+
T Consensus 78 ~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~ 156 (227)
T PRK08219 78 NAGVADLGPVAES-TVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADAL 156 (227)
T ss_pred CCCcCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHH
Confidence 9998766555554 458899999999999999999999999877899999999999988999999999999999999999
Q ss_pred HHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 197 RFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 197 a~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+.++...+++++++||+++|++........ . ......+..+++|+|++++++++++..
T Consensus 157 ~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~dva~~~~~~l~~~~~ 214 (227)
T PRK08219 157 REEEPGNVRVTSVHPGRTDTDMQRGLVAQE-G-------GEYDPERYLRPETVAKAVRFAVDAPPD 214 (227)
T ss_pred HHHhcCCceEEEEecCCccchHhhhhhhhh-c-------cccCCCCCCCHHHHHHHHHHHHcCCCC
Confidence 988765599999999999988654321110 0 011224578999999999999988654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-26 Score=201.49 Aligned_cols=208 Identities=22% Similarity=0.231 Sum_probs=164.2
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEec--------------cccCCCccee
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDHL 114 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDvl 114 (349)
++|||++++||.+++++|+++|++|++++|+. +.+++...++...+.++..+.+| .+.++++|++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999999975 44444445554344457777887 2234789999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFY 193 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~ 193 (349)
|||||......+.+. +.+++++.+++|+.+++.+++.+.+++.+. .+++|++||.++..+.++...|+++|++++.++
T Consensus 81 i~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~ 159 (239)
T TIGR01830 81 VNNAGITRDNLLMRM-KEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT 159 (239)
T ss_pred EECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence 999998766555554 457899999999999999999999988543 489999999999999999999999999999999
Q ss_pred HHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 194 ESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 194 ~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+.++.++... +++++++||+++|++..... .. .........+..+..+++|+|+.+++++.+.+.
T Consensus 160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 225 (239)
T TIGR01830 160 KSLAKELASRNITVNAVAPGFIDTDMTDKLS---EK-VKKKILSQIPLGRFGTPEEVANAVAFLASDEAS 225 (239)
T ss_pred HHHHHHHhhcCeEEEEEEECCCCChhhhhcC---hH-HHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccC
Confidence 9999998776 99999999999998764321 11 111111122344677899999999999966543
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-27 Score=197.91 Aligned_cols=213 Identities=20% Similarity=0.175 Sum_probs=160.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC--cchhhhHHHHhcCCCCeEEE-------------EEeccccCCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR--ENRLQGSTIDEYNPINEVTL-------------VSLNNKESKA 110 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~--~~~l~~~~~~~~~~~~~~~~-------------~~~d~~~~g~ 110 (349)
.+|++|+||+|+|||..++..+.+++-.....+++ ...++.+... ..+..++. +..+...+|+
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~--~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk 82 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVA--YGDDFVHVVGDITEEQLLGALREAPRKKGGK 82 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEE--ecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence 46889999999999999999999888655544443 3332222111 11111111 1112567789
Q ss_pred cceeeecCcCCCCcc--ccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHH
Q 039397 111 VDHLVNTASLGHTFF--FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 111 iDvlVnnAg~~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
.|++|||||...+-. +.+..|.++|++.+++|+++.+.+.+.++|.++++ .|.+||+||.++..|++++++||++|
T Consensus 83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K 162 (253)
T KOG1204|consen 83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK 162 (253)
T ss_pred eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence 999999999865432 32345668999999999999999999999999887 59999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc--cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE--DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
||.++|.+.||.|-...|++.++.||.+||+|........ ........+......+..+|...|+.+..+++.+
T Consensus 163 aAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 163 AARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKG 238 (253)
T ss_pred HHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhc
Confidence 9999999999999662399999999999999976543322 1112223333444568899999999999999876
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-25 Score=196.29 Aligned_cols=187 Identities=19% Similarity=0.204 Sum_probs=149.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc------------ccCCCcceee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN------------KESKAVDHLV 115 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~------------~~~g~iDvlV 115 (349)
|+++||||++|||++++++|+++|++|++++|+.+..++.... .+..+.+|. -..+++|++|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQAL------GAEALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhc------cceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 6899999999999999999999999999999997766543321 234566761 1124799999
Q ss_pred ecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCc---hhhHHHHHHHH
Q 039397 116 NTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRM---SLYASAKAALV 190 (349)
Q Consensus 116 nnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~---~~Y~asKaal~ 190 (349)
||+|.... ....+. +.++|++++++|+.+++.++++++|+|.+++|++|++||..+..+.... ..|+++|++++
T Consensus 76 ~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~ 154 (222)
T PRK06953 76 YVAGVYGPRTEGVEPI-TREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALN 154 (222)
T ss_pred ECCCcccCCCCCcccC-CHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHHH
Confidence 99998632 333343 4688999999999999999999999997767899999998877664332 35999999999
Q ss_pred HHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 191 TFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 191 ~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++++.++.++.. ++|++++||+++|++.... ...++++.++.++.++....
T Consensus 155 ~~~~~~~~~~~~-i~v~~v~Pg~i~t~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~ 205 (222)
T PRK06953 155 DALRAASLQARH-ATCIALHPGWVRTDMGGAQ-------------------AALDPAQSVAGMRRVIAQAT 205 (222)
T ss_pred HHHHHHhhhccC-cEEEEECCCeeecCCCCCC-------------------CCCCHHHHHHHHHHHHHhcC
Confidence 999999988743 8999999999999986531 34577999999999877653
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-25 Score=198.56 Aligned_cols=180 Identities=16% Similarity=0.113 Sum_probs=138.8
Q ss_pred HHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----------cccCCCcceeeecCcCCCCccccccCC
Q 039397 63 IAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----------NKESKAVDHLVNTASLGHTFFFEEVTD 131 (349)
Q Consensus 63 la~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----------~~~~g~iDvlVnnAg~~~~~~~~~~~~ 131 (349)
+|++|+++|++|++++|++++.+. ...+++| .+..+++|+||||||+..
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~--------- 60 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG--------- 60 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC---------
Confidence 478999999999999999776421 1123333 122368999999999752
Q ss_pred cchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc---------------------------CCCCchhhHH
Q 039397 132 TSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL---------------------------PLPRMSLYAS 184 (349)
Q Consensus 132 ~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~---------------------------~~~~~~~Y~a 184 (349)
.+.+++++++|+.+++.+++.++|+|.+ +|+||++||.+++. +.++...|++
T Consensus 61 ~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 139 (241)
T PRK12428 61 TAPVELVARVNFLGLRHLTEALLPRMAP-GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQL 139 (241)
T ss_pred CCCHHHhhhhchHHHHHHHHHHHHhccC-CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHH
Confidence 1457899999999999999999999964 48999999998863 5677889999
Q ss_pred HHHHHHHHHHHHH-HHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 185 AKAALVTFYESLR-FELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 185 sKaal~~l~~~la-~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
||+|+++++++++ .|++++ |+||+|+||+++|+|.......... ........+..+..+|||+|+++++++++...
T Consensus 140 sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~ 217 (241)
T PRK12428 140 SKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ--ERVDSDAKRMGRPATADEQAAVLVFLCSDAAR 217 (241)
T ss_pred HHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh--HhhhhcccccCCCCCHHHHHHHHHHHcChhhc
Confidence 9999999999999 999887 9999999999999987643211110 01111123455678999999999999987766
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 218 ~~~ 220 (241)
T PRK12428 218 WIN 220 (241)
T ss_pred Ccc
Confidence 554
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-24 Score=180.94 Aligned_cols=218 Identities=17% Similarity=0.146 Sum_probs=183.8
Q ss_pred CCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
..|+||++||+|-. +.|+..||+.|.++|++++.+..++ ++++...++........+.+|| .+
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~ 80 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK 80 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence 46899999999987 8999999999999999999999886 5555555553333345677888 56
Q ss_pred cCCCcceeeecCcCCC----CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhh
Q 039397 107 ESKAVDHLVNTASLGH----TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y 182 (349)
+.|++|.|||+-|... .+.+.+. +.|.|...+++...+...+++++.|.|.. +|+||.++=..+....|++...
T Consensus 81 ~~g~lD~lVHsIaFa~k~el~G~~~dt-sre~f~~a~~IS~YS~~~lak~a~~lM~~-ggSiltLtYlgs~r~vPnYNvM 158 (259)
T COG0623 81 KWGKLDGLVHSIAFAPKEELKGDYLDT-SREGFLIAMDISAYSFTALAKAARPLMNN-GGSILTLTYLGSERVVPNYNVM 158 (259)
T ss_pred hhCcccEEEEEeccCChHHhCCccccc-CHHHHHhHhhhhHhhHHHHHHHHHHhcCC-CCcEEEEEeccceeecCCCchh
Confidence 7899999999999876 4667774 56999999999999999999999999964 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+.+|||+++-+|.||.|++++ ||||.|+-||++|=-...... -..-..+.+...+.++.+++|||++...+|+++-.
T Consensus 159 GvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~--f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLs 236 (259)
T COG0623 159 GVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD--FRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLS 236 (259)
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc--HHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchh
Confidence 999999999999999999999 999999999999976554322 11233455667788999999999999999999977
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
+-+|
T Consensus 237 sgiT 240 (259)
T COG0623 237 SGIT 240 (259)
T ss_pred cccc
Confidence 6554
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-22 Score=221.32 Aligned_cols=170 Identities=14% Similarity=0.068 Sum_probs=142.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcc------------------------------------------
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARREN------------------------------------------ 82 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~------------------------------------------ 82 (349)
+||++|||||++|||+++|++|+++ |++|++++|+..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5899999999999999999999998 699999999820
Q ss_pred -----hhhhHHHHhcCCCCeEEEEEec-------------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhh
Q 039397 83 -----RLQGSTIDEYNPINEVTLVSLN-------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFW 144 (349)
Q Consensus 83 -----~l~~~~~~~~~~~~~~~~~~~d-------------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~ 144 (349)
+.++..+.+...+..+.++.+| ....+++|+||||||+...+.+.+. +.++|++++++|+.
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~-t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDK-TLEEFNAVYGTKVD 2154 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccC-CHHHHHHHHHHHHH
Confidence 0011122233345567888888 1223689999999999887777776 56999999999999
Q ss_pred hhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCC
Q 039397 145 GNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTK 220 (349)
Q Consensus 145 g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~ 220 (349)
|.+++++++.+.+. ++||++||+++..+.++++.|+++|++++++++.++.++.. ++|++|+||+++|+|..
T Consensus 2155 G~~~Ll~al~~~~~---~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~-irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2155 GLLSLLAALNAENI---KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPS-AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred HHHHHHHHHHHhCC---CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEECCeecCCccc
Confidence 99999999987653 47999999999999999999999999999999999998755 89999999999999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-21 Score=186.21 Aligned_cols=201 Identities=11% Similarity=0.073 Sum_probs=149.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC------C---CCeEEEEEecc-------ccC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN------P---INEVTLVSLNN-------KES 108 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~------~---~~~~~~~~~d~-------~~~ 108 (349)
.+||+++||||+||||++++++|+++|++|++++|+.++++.+..++.. + ..++.++.+|. +.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 4689999999999999999999999999999999999887766544321 1 12467778882 346
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-cCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-LPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-~~~~~~~~Y~asKa 187 (349)
+++|+||||+|.... ...++...+++|+.|..++++++.+. +.++||++||.++. .+.+.. .|. +|+
T Consensus 158 ggiDiVVn~AG~~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~a---gVgRIV~VSSiga~~~g~p~~-~~~-sk~ 225 (576)
T PLN03209 158 GNASVVICCIGASEK-------EVFDVTGPYRIDYLATKNLVDAATVA---KVNHFILVTSLGTNKVGFPAA-ILN-LFW 225 (576)
T ss_pred cCCCEEEEccccccc-------cccchhhHHHHHHHHHHHHHHHHHHh---CCCEEEEEccchhcccCcccc-chh-hHH
Confidence 789999999997531 11346788999999999999998653 34799999998764 333332 244 889
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++..+.+.+..++... |++++|+||++.|++.... . . . ...........++.++.+|||+.+++++++..
T Consensus 226 ~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~-t-~-~v~~~~~d~~~gr~isreDVA~vVvfLasd~~ 296 (576)
T PLN03209 226 GVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-E-T-H-NLTLSEEDTLFGGQVSNLQVAELMACMAKNRR 296 (576)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-c-c-c-ceeeccccccCCCccCHHHHHHHHHHHHcCch
Confidence 9988899999988877 9999999999998864321 0 0 0 00100111233567899999999999999653
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-20 Score=173.22 Aligned_cols=206 Identities=16% Similarity=0.079 Sum_probs=143.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEecccc-------CCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVTLVSLNNKE-------SKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d~~~-------~g~iDvlVn 116 (349)
++|++|||||+|+||++++++|+++|++|++++|+.+..+....... .....+.++.+|... ..++|++||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 47999999999999999999999999999999998766544322211 112356777777332 346899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC-------------------
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP------------------- 177 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~------------------- 177 (349)
|||.... .. +.+.+.+.+++|+.|++++++++.+.+ +.++||++||.+++.+..
T Consensus 84 ~A~~~~~----~~-~~~~~~~~~~~n~~g~~~ll~a~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~ 156 (325)
T PLN02989 84 TASPVAI----TV-KTDPQVELINPAVNGTINVLRTCTKVS--SVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSF 156 (325)
T ss_pred eCCCCCC----CC-CCChHHHHHHHHHHHHHHHHHHHHHcC--CceEEEEecchhheecCCccCCCCCccCcCCCCchhH
Confidence 9996421 11 235578999999999999999998764 246999999987654311
Q ss_pred ---CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhh----hcCCCCHHHHH
Q 039397 178 ---RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREV----HVAGGPVEDFA 250 (349)
Q Consensus 178 ---~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~edvA 250 (349)
....|+.||.+.+.+++.++.+.+ +.++.+.|+.+..|............-........+ ....+.++|+|
T Consensus 157 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva 234 (325)
T PLN02989 157 AEERKQWYVLSKTLAEDAAWRFAKDNE--IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVA 234 (325)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHcC--CeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHH
Confidence 024699999999999998876653 788999999888775432100000000000000011 13466789999
Q ss_pred HHHHHHHhcC
Q 039397 251 RLIVSGACRG 260 (349)
Q Consensus 251 ~~i~~l~~~~ 260 (349)
++++.+++.+
T Consensus 235 ~a~~~~l~~~ 244 (325)
T PLN02989 235 LAHVKALETP 244 (325)
T ss_pred HHHHHHhcCc
Confidence 9999998864
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-19 Score=170.03 Aligned_cols=201 Identities=14% Similarity=0.109 Sum_probs=143.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlV 115 (349)
++||+++||||+|+||++++++|+++| ++|++++|+.........+.. ...+.++.+|. +...++|++|
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~~iD~Vi 79 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALRGVDYVV 79 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence 468999999999999999999999987 799999998765444333332 23567777782 2235689999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYES 195 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~ 195 (349)
||||.... +..+ .+.++++++|+.|+.++++++.+. +.++||++||.....| ...|++||++.+.++++
T Consensus 80 h~Ag~~~~-~~~~----~~~~~~~~~Nv~g~~~ll~aa~~~---~~~~iV~~SS~~~~~p---~~~Y~~sK~~~E~l~~~ 148 (324)
T TIGR03589 80 HAAALKQV-PAAE----YNPFECIRTNINGAQNVIDAAIDN---GVKRVVALSTDKAANP---INLYGATKLASDKLFVA 148 (324)
T ss_pred ECcccCCC-chhh----cCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEeCCCCCCC---CCHHHHHHHHHHHHHHH
Confidence 99997532 1111 223578999999999999999863 3369999999765443 46799999999999999
Q ss_pred HHHHhcCC-eeEEEEecCcccCCCCCCcccccc-----ch-hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 196 LRFELNDE-VGITIATHGWIGIEMTKGKFMLED-----GA-EMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 196 la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++.+.+.. ++++++.||.+..+... ...... +. ..... .......++.++|+|++++.++...
T Consensus 149 ~~~~~~~~gi~~~~lR~g~v~G~~~~-~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~~~ 218 (324)
T TIGR03589 149 ANNISGSKGTRFSVVRYGNVVGSRGS-VVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLERM 218 (324)
T ss_pred HHhhccccCcEEEEEeecceeCCCCC-cHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHhhC
Confidence 98877766 99999999999876311 100000 00 00000 0011124678999999999999764
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.6e-20 Score=156.72 Aligned_cols=161 Identities=21% Similarity=0.176 Sum_probs=129.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHH---HHhcCCCCeEEEEEec--------------cccCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGST---IDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~---~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
|+++||||++|||.+++++|+++|+ .|++++|+++..+... .++...+.+...+.+| ...++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999997 6888888876544332 3333334566777787 22357
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|.+|||||......+.+. +.+++++++++|+.+++++.+++.+. +.+++|++||..+..+.++...|+++|+++
T Consensus 81 ~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~ 156 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANL-TPERFAAVLAPKVDGAWNLHELTRDL---PLDFFVLFSSVAGVLGNPGQANYAAANAFL 156 (180)
T ss_pred CeeEEEEccccCCccccccC-CHHHHHHhhchHhHHHHHHHHHhccC---CcceEEEEccHHHhcCCCCchhhHHHHHHH
Confidence 89999999998766666665 45889999999999999999998542 347999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCccc
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIG 215 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~ 215 (349)
+.+++.++.+ .+++.++.||+++
T Consensus 157 ~~~~~~~~~~---~~~~~~~~~g~~~ 179 (180)
T smart00822 157 DALAAHRRAR---GLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHhc---CCceEEEeecccc
Confidence 9999887542 2679999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-18 Score=161.49 Aligned_cols=206 Identities=16% Similarity=0.071 Sum_probs=140.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEecccc-------CCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVTLVSLNNKE-------SKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d~~~-------~g~iDvlV 115 (349)
-+||+++||||+|+||.+++++|+++|++|+++.|+.++.+....... .....+.++.+|... ..++|++|
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 568999999999999999999999999999999998765443322111 112356777777332 34589999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-CC----------------C-
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-PL----------------P- 177 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-~~----------------~- 177 (349)
|+||..... . .+...+++++|+.|+.++++++.... +.++||++||.++.. +. |
T Consensus 83 h~A~~~~~~----~--~~~~~~~~~~nv~gt~~ll~~~~~~~--~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~ 154 (322)
T PLN02986 83 HTASPVFFT----V--KDPQTELIDPALKGTINVLNTCKETP--SVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPS 154 (322)
T ss_pred EeCCCcCCC----C--CCchhhhhHHHHHHHHHHHHHHHhcC--CccEEEEecchhheecCCccCCCCCCcCcccCCChH
Confidence 999964221 1 12235689999999999999886431 236899999987532 11 0
Q ss_pred ----CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHH----hhhcCCCCHHHH
Q 039397 178 ----RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEER----EVHVAGGPVEDF 249 (349)
Q Consensus 178 ----~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~edv 249 (349)
....|++||.+.+.+++.+..+.+ +.+++++|+.+.+|............-..+.... ......+.++|+
T Consensus 155 ~~~~~~~~Y~~sK~~aE~~~~~~~~~~~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dv 232 (322)
T PLN02986 155 LCRETKNWYPLSKILAENAAWEFAKDNG--IDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDV 232 (322)
T ss_pred HhhccccchHHHHHHHHHHHHHHHHHhC--CeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHH
Confidence 135699999999999988876653 8999999999988764321000000000000000 111346789999
Q ss_pred HHHHHHHHhcC
Q 039397 250 ARLIVSGACRG 260 (349)
Q Consensus 250 A~~i~~l~~~~ 260 (349)
|++++.++..+
T Consensus 233 a~a~~~al~~~ 243 (322)
T PLN02986 233 ALAHIKALETP 243 (322)
T ss_pred HHHHHHHhcCc
Confidence 99999999865
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=159.31 Aligned_cols=207 Identities=11% Similarity=-0.000 Sum_probs=137.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch--hhhHHHHhcCCCCeEEEEEeccccCC-------Ccceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR--LQGSTIDEYNPINEVTLVSLNNKESK-------AVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~--l~~~~~~~~~~~~~~~~~~~d~~~~g-------~iDvlVn 116 (349)
++|+|+||||+|+||++++++|+++|++|+++.|+.++ ..+....+......+.++.+|....+ .+|.++|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 57899999999999999999999999999999996432 22222222212235677778844333 3555555
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-C-------------C----
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-P-------------R---- 178 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-~-------------~---- 178 (349)
.++.. .+. . +++++++++|+.|++++++++.+.+ +.++||++||.++.... + .
T Consensus 85 ~~~~~-----~~~-~-~~~~~~~~~nv~gt~~ll~aa~~~~--~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~ 155 (297)
T PLN02583 85 CFDPP-----SDY-P-SYDEKMVDVEVRAAHNVLEACAQTD--TIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNF 155 (297)
T ss_pred eCccC-----Ccc-c-ccHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEecchHheecccccCCCCCCCCcccCCCHHH
Confidence 44321 111 1 3467899999999999999998764 23699999998765311 0 0
Q ss_pred ----chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHH
Q 039397 179 ----MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 179 ----~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~ 254 (349)
...|+.||...+.+++.++.+. .+.+++++|+.+.++........... ............++++|+|++++
T Consensus 156 ~~~~~~~Y~~sK~~aE~~~~~~~~~~--gi~~v~lrp~~v~Gp~~~~~~~~~~~---~~~~~~~~~~~~v~V~Dva~a~~ 230 (297)
T PLN02583 156 CRKFKLWHALAKTLSEKTAWALAMDR--GVNMVSINAGLLMGPSLTQHNPYLKG---AAQMYENGVLVTVDVNFLVDAHI 230 (297)
T ss_pred HhhcccHHHHHHHHHHHHHHHHHHHh--CCcEEEEcCCcccCCCCCCchhhhcC---CcccCcccCcceEEHHHHHHHHH
Confidence 0169999999999998887553 28999999999988754321100000 00000011224788999999999
Q ss_pred HHHhcC---CceEEc
Q 039397 255 SGACRG---DTYVKF 266 (349)
Q Consensus 255 ~l~~~~---~~~i~~ 266 (349)
.++++. .+++..
T Consensus 231 ~al~~~~~~~r~~~~ 245 (297)
T PLN02583 231 RAFEDVSSYGRYLCF 245 (297)
T ss_pred HHhcCcccCCcEEEe
Confidence 999854 345544
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.3e-18 Score=158.24 Aligned_cols=205 Identities=11% Similarity=0.034 Sum_probs=138.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH--HhcCCCCeEEEEEeccc-------cCCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI--DEYNPINEVTLVSLNNK-------ESKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~--~~~~~~~~~~~~~~d~~-------~~g~iDvlV 115 (349)
+++|+++||||+|+||++++++|+++|++|+++.|+.+....... .+.. ...+.++.+|.. ...++|++|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 457899999999999999999999999999999988654432221 1111 124667777722 235789999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-------------------
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------------- 176 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------------- 176 (349)
|+|+... .. ..+.+...+++|+.|+.++++++.+.. +.+++|++||.+.+...
T Consensus 86 h~A~~~~---~~---~~~~~~~~~~~nv~g~~~ll~a~~~~~--~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~ 157 (338)
T PLN00198 86 HVATPVN---FA---SEDPENDMIKPAIQGVHNVLKACAKAK--SVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEF 157 (338)
T ss_pred EeCCCCc---cC---CCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeecceeeeccCCCCCCceeccccCCchhh
Confidence 9998531 11 113345678999999999999987642 23699999998765311
Q ss_pred -----CCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc--------cchhhhhHH-HH----h
Q 039397 177 -----PRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE--------DGAEMQWKE-ER----E 238 (349)
Q Consensus 177 -----~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~-~~----~ 238 (349)
+....|+.||.+.+.+++.++.+.+ +.++.+.|+.+-.|......... .+....... .. .
T Consensus 158 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 235 (338)
T PLN00198 158 LTSEKPPTWGYPASKTLAEKAAWKFAEENN--IDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLS 235 (338)
T ss_pred hhhcCCccchhHHHHHHHHHHHHHHHHhcC--ceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCcccccccccccccc
Confidence 2345799999999999999876643 78888999888776422110000 000000000 00 0
Q ss_pred hhcCCCCHHHHHHHHHHHHhcC
Q 039397 239 VHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 239 ~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.....+.++|+|++++.+++.+
T Consensus 236 ~~~~~i~V~D~a~a~~~~~~~~ 257 (338)
T PLN00198 236 GSISITHVEDVCRAHIFLAEKE 257 (338)
T ss_pred CCcceeEHHHHHHHHHHHhhCc
Confidence 0135788999999999999865
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.3e-18 Score=160.87 Aligned_cols=206 Identities=13% Similarity=-0.029 Sum_probs=139.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc---------CCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE---------SKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~---------~g~iDvlV 115 (349)
++||++|||||+|+||.+++++|+++|++|++++|+..........+.. ...+..+.+|... ..++|++|
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 80 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL-AKKIEDHFGDIRDAAKLRKAIAEFKPEIVF 80 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh-cCCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence 4679999999999999999999999999999999987654433222211 2245556666211 12589999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc------------CCCCchhhH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL------------PLPRMSLYA 183 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~------------~~~~~~~Y~ 183 (349)
|+||.... .. ..+++...+++|+.++.++++++... ...+++|++||...+. +..+...|+
T Consensus 81 h~A~~~~~----~~-~~~~~~~~~~~N~~g~~~ll~a~~~~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~ 153 (349)
T TIGR02622 81 HLAAQPLV----RK-SYADPLETFETNVMGTVNLLEAIRAI--GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYS 153 (349)
T ss_pred ECCccccc----cc-chhCHHHHHHHhHHHHHHHHHHHHhc--CCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcch
Confidence 99996422 11 22456789999999999999988542 1246899999965432 123456899
Q ss_pred HHHHHHHHHHHHHHHHhcC-----CeeEEEEecCcccCCCCCC--cccc------ccchhhhhHHHHhhhcCCCCHHHHH
Q 039397 184 SAKAALVTFYESLRFELND-----EVGITIATHGWIGIEMTKG--KFML------EDGAEMQWKEEREVHVAGGPVEDFA 250 (349)
Q Consensus 184 asKaal~~l~~~la~el~~-----~I~v~~v~PG~v~T~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~edvA 250 (349)
+||.+.+.+++.++.++.. .++++++.|+.+..+.... .... ..+..... .........+..+|+|
T Consensus 154 ~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a 232 (349)
T TIGR02622 154 SSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPL 232 (349)
T ss_pred hHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHH
Confidence 9999999999999988754 3899999999887763211 0000 00000000 0011223456779999
Q ss_pred HHHHHHHhc
Q 039397 251 RLIVSGACR 259 (349)
Q Consensus 251 ~~i~~l~~~ 259 (349)
++++.++++
T Consensus 233 ~a~~~~~~~ 241 (349)
T TIGR02622 233 SGYLLLAEK 241 (349)
T ss_pred HHHHHHHHH
Confidence 999988764
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=157.92 Aligned_cols=201 Identities=15% Similarity=0.022 Sum_probs=138.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH-HHHhcCCCCeEEEEEeccc-------cCCCcceeee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS-TIDEYNPINEVTLVSLNNK-------ESKAVDHLVN 116 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~-~~~~~~~~~~~~~~~~d~~-------~~g~iDvlVn 116 (349)
+++|+++||||+|+||++++++|+++|++|++++|+.+..... ...+......+.++.+|.. ...++|++||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 5678999999999999999999999999999999986643321 1122222234667777732 2346899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC----C---------------
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL----P--------------- 177 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~----~--------------- 177 (349)
+|+.. .+++++.+++|+.|+.++++++... +.++||++||.++..+. +
T Consensus 88 ~A~~~----------~~~~~~~~~~nv~gt~~ll~aa~~~---~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~ 154 (342)
T PLN02214 88 TASPV----------TDDPEQMVEPAVNGAKFVINAAAEA---KVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFC 154 (342)
T ss_pred ecCCC----------CCCHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEeccceeeeccCCCCCCcccCcccCCChhhc
Confidence 99853 1335788999999999999998753 23589999997654321 0
Q ss_pred --CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhh-H----HHHhhhcCCCCHHHHH
Q 039397 178 --RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQW-K----EEREVHVAGGPVEDFA 250 (349)
Q Consensus 178 --~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~edvA 250 (349)
....|+.||.+.+.+++.++.+.+ +.+..+.|+.+-.|.........-...... . .........+.++|+|
T Consensus 155 ~~p~~~Y~~sK~~aE~~~~~~~~~~g--~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva 232 (342)
T PLN02214 155 KNTKNWYCYGKMVAEQAAWETAKEKG--VDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVA 232 (342)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHcC--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHH
Confidence 124799999999999998877654 788999998887664321100000000000 0 0001123567899999
Q ss_pred HHHHHHHhcC
Q 039397 251 RLIVSGACRG 260 (349)
Q Consensus 251 ~~i~~l~~~~ 260 (349)
++++.+++.+
T Consensus 233 ~a~~~al~~~ 242 (342)
T PLN02214 233 LAHVLVYEAP 242 (342)
T ss_pred HHHHHHHhCc
Confidence 9999999864
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=154.71 Aligned_cols=205 Identities=18% Similarity=0.054 Sum_probs=137.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh--cCCCCeEEEEEecccc-------CCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE--YNPINEVTLVSLNNKE-------SKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~~~~d~~~-------~g~iDvlVn 116 (349)
++|++|||||+|+||++++++|+++|++|++++|+........... .....++.++.+|..+ ..++|++||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 4689999999999999999999999999999999865433222111 1112356777777332 346899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-c-CC---------------C--
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-L-PL---------------P-- 177 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-~-~~---------------~-- 177 (349)
+|+.... . ..+..+..+++|+.|+.++++++.... +.+++|++||.++. . +. |
T Consensus 83 ~A~~~~~----~--~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~ 154 (322)
T PLN02662 83 TASPFYH----D--VTDPQAELIDPAVKGTLNVLRSCAKVP--SVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAF 154 (322)
T ss_pred eCCcccC----C--CCChHHHHHHHHHHHHHHHHHHHHhCC--CCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhH
Confidence 9986421 1 112224789999999999999987542 23589999997642 1 11 1
Q ss_pred ---CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHH----HhhhcCCCCHHHHH
Q 039397 178 ---RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE----REVHVAGGPVEDFA 250 (349)
Q Consensus 178 ---~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~edvA 250 (349)
....|+.+|.+.+.+++.+..+.+ ++++.+.|+.+.++................... .......+.++|+|
T Consensus 155 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 232 (322)
T PLN02662 155 CEESKLWYVLSKTLAEEAAWKFAKENG--IDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVA 232 (322)
T ss_pred hhcccchHHHHHHHHHHHHHHHHHHcC--CcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHH
Confidence 014799999999999988776543 789999999998875432100000000000000 01123568889999
Q ss_pred HHHHHHHhcC
Q 039397 251 RLIVSGACRG 260 (349)
Q Consensus 251 ~~i~~l~~~~ 260 (349)
++++.++..+
T Consensus 233 ~a~~~~~~~~ 242 (322)
T PLN02662 233 NAHIQAFEIP 242 (322)
T ss_pred HHHHHHhcCc
Confidence 9999999864
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.2e-18 Score=159.76 Aligned_cols=212 Identities=15% Similarity=0.028 Sum_probs=136.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchh-----hhHHHHhcCCCCeEEEEEeccccC---------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL-----QGSTIDEYNPINEVTLVSLNNKES--------- 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l-----~~~~~~~~~~~~~~~~~~~d~~~~--------- 108 (349)
.+.++|+||||||+|+||.+++++|+++|++|++++|+.+.. +....+.......+.++.+|....
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD 81 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence 467899999999999999999999999999999999976432 111111111123467777773211
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccC----------C
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLP----------L 176 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~----------~ 176 (349)
-++|++|||||....... .+..+..+++|+.|+.++++++.+.+.+++ -++|++||.+.+-. .
T Consensus 82 ~~~d~Vih~A~~~~~~~~-----~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~ 156 (340)
T PLN02653 82 IKPDEVYNLAAQSHVAVS-----FEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPF 156 (340)
T ss_pred cCCCEEEECCcccchhhh-----hhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCC
Confidence 147999999997543211 133467889999999999999998875432 26888887643321 1
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCC----eeEEEEecCcccCCCCCCcccc-----ccchhhh-hHHHHhhhcCCCCH
Q 039397 177 PRMSLYASAKAALVTFYESLRFELNDE----VGITIATHGWIGIEMTKGKFML-----EDGAEMQ-WKEEREVHVAGGPV 246 (349)
Q Consensus 177 ~~~~~Y~asKaal~~l~~~la~el~~~----I~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~ 246 (349)
.....|+.||.+.+.+++.++.+++-. +.++.+.|+...+.+. ..... ..+.... +..........+..
T Consensus 157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v 235 (340)
T PLN02653 157 HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVT-RKITRAVGRIKVGLQKKLFLGNLDASRDWGFA 235 (340)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccch-hHHHHHHHHHHcCCCCceEeCCCcceecceeH
Confidence 135689999999999999999887532 3334445653322111 00000 0000000 00111122356788
Q ss_pred HHHHHHHHHHHhcC
Q 039397 247 EDFARLIVSGACRG 260 (349)
Q Consensus 247 edvA~~i~~l~~~~ 260 (349)
+|+|++++.++..+
T Consensus 236 ~D~a~a~~~~~~~~ 249 (340)
T PLN02653 236 GDYVEAMWLMLQQE 249 (340)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999864
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.2e-17 Score=151.15 Aligned_cols=207 Identities=14% Similarity=0.016 Sum_probs=139.4
Q ss_pred CCCCEEEEeCCCchHHHH--HHHHHHHcCCeEEEEecCcchhh------------hHHHHhcCCCCeEEEEEec------
Q 039397 45 MEDKVVIITGASSDIGEQ--IAYEYAKRKANLVLVARRENRLQ------------GSTIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~a--la~~la~~G~~Vv~~~r~~~~l~------------~~~~~~~~~~~~~~~~~~d------ 104 (349)
-.+|++||||+|+|||.+ +|++| ++|++|+++++..++.+ .....+...+..+..+.+|
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 457999999999999999 89999 99999999986432211 1222233333456677888
Q ss_pred --------cccCCCcceeeecCcCCCCcc---------------------cccc------------CCcchHHHHHHhHh
Q 039397 105 --------NKESKAVDHLVNTASLGHTFF---------------------FEEV------------TDTSIFPRLLDINF 143 (349)
Q Consensus 105 --------~~~~g~iDvlVnnAg~~~~~~---------------------~~~~------------~~~~~~~~~~~vN~ 143 (349)
.+.+|++|+||||+|...... +.+. -..++++ ..+++
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~--~Tv~v 195 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIA--DTVKV 195 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHH--HHHHh
Confidence 456799999999999874322 1110 0011222 23455
Q ss_pred hhh-----HHHHHHhccccccCCCeEEEEeccccccCCCCc--hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCccc
Q 039397 144 WGN-----VYPTFVALPYLHESNGRVVVNASVENWLPLPRM--SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIG 215 (349)
Q Consensus 144 ~g~-----~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~--~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~ 215 (349)
+|. +.=.+...+.| ..++++|.+|+..+....|.+ ..-+++|++|++-++.|+.+|++. +|+|++..|++.
T Consensus 196 Mggedw~~Wi~al~~a~ll-a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~ 274 (398)
T PRK13656 196 MGGEDWELWIDALDEAGVL-AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVV 274 (398)
T ss_pred hccchHHHHHHHHHhcccc-cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence 555 22245555666 457899999999998888876 488999999999999999999998 999999999999
Q ss_pred CCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 216 IEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 216 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
|.-....... ..........++....-|.+-+.+.++..+
T Consensus 275 T~Ass~Ip~~----~ly~~~l~kvmk~~g~he~~ieq~~rl~~~ 314 (398)
T PRK13656 275 TQASSAIPVM----PLYISLLFKVMKEKGTHEGCIEQIYRLFSE 314 (398)
T ss_pred chhhhcCCCc----HHHHHHHHHHHHhcCCCCChHHHHHHHHHH
Confidence 9877654211 111111112223334446666666666553
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.7e-17 Score=152.99 Aligned_cols=211 Identities=12% Similarity=0.013 Sum_probs=140.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------cCCCcceeeec
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------ESKAVDHLVNT 117 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~g~iDvlVnn 117 (349)
-+++++|||||+|+||.+++++|+++|++|++++|+.++.+....++.. ...+.++.+|.. ...++|++||+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 3568999999999999999999999999999999987655544433322 345777777732 23468999999
Q ss_pred CcCCCCccccccCCcchH--HHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-------------------
Q 039397 118 ASLGHTFFFEEVTDTSIF--PRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------------- 176 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------------- 176 (349)
|+...........+.+.+ ..++++|+.|+.++++++.+.. ..+++|++||.+.+...
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~ 164 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK--TVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPID 164 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC--CccEEEEEechhhccccccCCCCCCccCcccCCcHH
Confidence 997654321111122322 4577888999999999987653 23689999997665311
Q ss_pred ------CCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhh-hHHH------------H
Q 039397 177 ------PRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQ-WKEE------------R 237 (349)
Q Consensus 177 ------~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~------------~ 237 (349)
+....|+.||.+.+.+++.++.+.+ +.+.++.|+.+-.|.........-..... .... +
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 242 (353)
T PLN02896 165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENG--IDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSR 242 (353)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHcC--CeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccc
Confidence 1123799999999999998876653 78999999777766432211100000000 0000 0
Q ss_pred hhhcCCCCHHHHHHHHHHHHhcC
Q 039397 238 EVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 238 ~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
......+.++|+|++++.++..+
T Consensus 243 ~~~~dfi~v~Dva~a~~~~l~~~ 265 (353)
T PLN02896 243 MGSIALVHIEDICDAHIFLMEQT 265 (353)
T ss_pred cCceeEEeHHHHHHHHHHHHhCC
Confidence 00124678999999999999754
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.8e-17 Score=152.41 Aligned_cols=205 Identities=11% Similarity=-0.038 Sum_probs=140.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC--CCeEEEEEeccc-------cCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTLVSLNNK-------ESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d~~-------~~g~iDvlVn 116 (349)
..|++|||||+|+||.+++++|+++|++|++++|+.+............ ...+.++..|.. ....+|++||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 4689999999999999999999999999999999876655443222111 124666777732 2335899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC----C---------------
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL----P--------------- 177 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~----~--------------- 177 (349)
+|+..... . .+..+..+++|+.|+.++++++.+.. ..++||++||...+.+. +
T Consensus 84 ~A~~~~~~---~---~~~~~~~~~~Nv~gt~~ll~aa~~~~--~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~ 155 (351)
T PLN02650 84 VATPMDFE---S---KDPENEVIKPTVNGMLSIMKACAKAK--TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRR 155 (351)
T ss_pred eCCCCCCC---C---CCchhhhhhHHHHHHHHHHHHHHhcC--CceEEEEecchhhcccCCCCCCccCcccCCchhhhhc
Confidence 99864211 1 12235789999999999999998753 12589999998543211 1
Q ss_pred ---CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhh-hHHH-----HhhhcCCCCHHH
Q 039397 178 ---RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQ-WKEE-----REVHVAGGPVED 248 (349)
Q Consensus 178 ---~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~ed 248 (349)
....|+.||.+.+.+++.++.+.+ ++++.+.|+.+.+|.........-..... .... .......+.++|
T Consensus 156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~g--i~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~D 233 (351)
T PLN02650 156 KKMTGWMYFVSKTLAEKAAWKYAAENG--LDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDD 233 (351)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHcC--CeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHH
Confidence 123799999999999999887643 89999999998887543211100000000 0000 001236788999
Q ss_pred HHHHHHHHHhcC
Q 039397 249 FARLIVSGACRG 260 (349)
Q Consensus 249 vA~~i~~l~~~~ 260 (349)
+|++++.+++.+
T Consensus 234 va~a~~~~l~~~ 245 (351)
T PLN02650 234 LCNAHIFLFEHP 245 (351)
T ss_pred HHHHHHHHhcCc
Confidence 999999999764
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=144.42 Aligned_cols=228 Identities=18% Similarity=0.035 Sum_probs=158.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH--HHHhcCCCCeEEEEEeccccC-------CCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS--TIDEYNPINEVTLVSLNNKES-------KAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~--~~~~~~~~~~~~~~~~d~~~~-------g~iDvlVn 116 (349)
.+++|+||||||.||.+++++|+++||+|..+.|++++.+.. ..++.........+..|..+. .++|+++|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 789999999999999999999999999999999999885442 445544455578888884433 46899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-CC-----------------
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-PR----------------- 178 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-~~----------------- 178 (349)
.|........ +.-.++++.++.|+.++++++...- +-.|||++||.++.... +.
T Consensus 85 ~Asp~~~~~~------~~e~~li~pav~Gt~nVL~ac~~~~--sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~ 156 (327)
T KOG1502|consen 85 TASPVDFDLE------DPEKELIDPAVKGTKNVLEACKKTK--SVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDF 156 (327)
T ss_pred eCccCCCCCC------CcHHhhhhHHHHHHHHHHHHHhccC--CcceEEEeccHHHhccCCcCCCCCcccccccCCcHHH
Confidence 8875433211 1124799999999999999998652 23689999999988654 21
Q ss_pred ----chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHH-----HHhhhcCCCCHHHH
Q 039397 179 ----MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKE-----EREVHVAGGPVEDF 249 (349)
Q Consensus 179 ----~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~edv 249 (349)
...|+.||.-.+.-+..++.|-+ +...+++||.|-.|.................. ........++++||
T Consensus 157 ~~~~~~~Y~~sK~lAEkaAw~fa~e~~--~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDV 234 (327)
T KOG1502|consen 157 CRCKKLWYALSKTLAEKAAWEFAKENG--LDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDV 234 (327)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhCC--ccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHH
Confidence 13599999877777666665542 78999999999888765521111100000000 01112235788999
Q ss_pred HHHHHHHHhcC---CceEEcCc---hHHHHHHHHHhchHH
Q 039397 250 ARLIVSGACRG---DTYVKFPS---WYDVFLLYRVFAPHV 283 (349)
Q Consensus 250 A~~i~~l~~~~---~~~i~~p~---~~~~~~~~~~~~P~~ 283 (349)
|++.+.+++++ .+|+.... +-.....++.++|.+
T Consensus 235 A~AHv~a~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~ 274 (327)
T KOG1502|consen 235 ALAHVLALEKPSAKGRYICVGEVVSIKEIADILRELFPDY 274 (327)
T ss_pred HHHHHHHHcCcccCceEEEecCcccHHHHHHHHHHhCCCC
Confidence 99999999987 45665543 233556667777743
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=140.41 Aligned_cols=131 Identities=15% Similarity=0.063 Sum_probs=100.3
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
.|.+++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...+.....+.+| .
T Consensus 9 ~~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~ 88 (169)
T PRK06720 9 VMKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITL 88 (169)
T ss_pred ccccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999887776666664334456667777 3
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--------CeEEEEeccccc
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--------GRVVVNASVENW 173 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--------g~IV~isS~~~~ 173 (349)
+.+|++|++|||||+..........+.++ ++ .+|+.+++..++.+.++|++++ |++..|||.++.
T Consensus 89 ~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 89 NAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred HHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence 45789999999999877544333223233 33 7788888999999999876543 788888876654
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-17 Score=140.95 Aligned_cols=176 Identities=18% Similarity=0.155 Sum_probs=142.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-----eEEEEecCcchhhhHHHHhc----CCCCeEEEEEec------------
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-----NLVLVARRENRLQGSTIDEY----NPINEVTLVSLN------------ 104 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-----~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~~~~d------------ 104 (349)
..|+++|||+++|||.+|+.+|.+.-. ++++++|+-++.+++...+. +...++..+..|
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 468999999999999999999998753 58899999999998887762 224567777887
Q ss_pred --cccCCCcceeeecCcCCCCccc--------------cc------------cCCcchHHHHHHhHhhhhHHHHHHhccc
Q 039397 105 --NKESKAVDHLVNTASLGHTFFF--------------EE------------VTDTSIFPRLLDINFWGNVYPTFVALPY 156 (349)
Q Consensus 105 --~~~~g~iDvlVnnAg~~~~~~~--------------~~------------~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 156 (349)
.+.+.++|.+..|||++....+ .. ..+.++...++++|++|++++.+.+.|.
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 4667899999999998653211 00 1234778999999999999999999999
Q ss_pred cccCC-CeEEEEecccccc---------CCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCC
Q 039397 157 LHESN-GRVVVNASVENWL---------PLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKG 221 (349)
Q Consensus 157 m~~~~-g~IV~isS~~~~~---------~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~ 221 (349)
+-.+. ..+|.+||..+.. ...+..+|..||.+++-+.-++-..+.+. +.-.+++||..-|.+...
T Consensus 162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~ 237 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSE 237 (341)
T ss_pred hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhh
Confidence 86554 4999999988753 34567889999999999999998888876 888999999998887654
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-16 Score=139.66 Aligned_cols=195 Identities=14% Similarity=0.152 Sum_probs=129.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc--------cC-CCcce
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK--------ES-KAVDH 113 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~--------~~-g~iDv 113 (349)
++.++|+++||||+|+||++++++|+++|++|+++.|+.++...... . ...+.++.+|.. .. .++|+
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~-~~~~~~~~~Dl~d~~~~l~~~~~~~~d~ 88 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---Q-DPSLQIVRADVTEGSDKLVEAIGDDSDA 88 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---c-CCceEEEEeeCCCCHHHHHHHhhcCCCE
Confidence 35567899999999999999999999999999999998776543221 1 224556666622 23 37999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc---CCCCchhhHHHHHHHH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL---PLPRMSLYASAKAALV 190 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~---~~~~~~~Y~asKaal~ 190 (349)
+|+|+|..... + .. ..+++|+.++.++++++.. .+.++||++||.+.+. +.+....|.+.|....
T Consensus 89 vi~~~g~~~~~---~--~~----~~~~~n~~~~~~ll~a~~~---~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~ 156 (251)
T PLN00141 89 VICATGFRRSF---D--PF----APWKVDNFGTVNLVEACRK---AGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGL 156 (251)
T ss_pred EEECCCCCcCC---C--CC----CceeeehHHHHHHHHHHHH---cCCCEEEEEccccccCCCcccccCcchhHHHHHHH
Confidence 99999864211 1 11 1246888899999888742 2347999999986432 2333455777666444
Q ss_pred HHHHHHHHH--hcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 191 TFYESLRFE--LNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 191 ~l~~~la~e--l~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
.+...+..| +... ++++++.||++.++........... .......++++|+|+.++.++.+..
T Consensus 157 ~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~--------~~~~~~~i~~~dvA~~~~~~~~~~~ 222 (251)
T PLN00141 157 TLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPE--------DTLYEGSISRDQVAEVAVEALLCPE 222 (251)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCC--------CccccCcccHHHHHHHHHHHhcChh
Confidence 433333333 3444 9999999999987654322111110 0011246899999999999997754
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.8e-16 Score=133.17 Aligned_cols=158 Identities=18% Similarity=0.165 Sum_probs=117.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcc---hhhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-NLVLVARREN---RLQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~---~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
+++||||.||||..+++.|+++|+ +|++++|+.. +.++...++...+..+....+| .+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 789999999999999999999985 8999999932 2333445555556789999998 345589
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
+|.+||+||......+.+. +.++++.++...+.|..++.+.+.+. .-..+|.+||+++..+.++++.|+++.+.++
T Consensus 82 i~gVih~ag~~~~~~~~~~-t~~~~~~~~~~Kv~g~~~L~~~~~~~---~l~~~i~~SSis~~~G~~gq~~YaaAN~~ld 157 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQ-TPDEFDAVLAPKVRGLWNLHEALENR---PLDFFILFSSISSLLGGPGQSAYAAANAFLD 157 (181)
T ss_dssp EEEEEE-------B-GCC---HHHHHHHHHHHHHHHHHHHHHHTTT---TTSEEEEEEEHHHHTT-TTBHHHHHHHHHHH
T ss_pred cceeeeeeeeecccccccC-CHHHHHHHHhhhhhHHHHHHHHhhcC---CCCeEEEECChhHhccCcchHhHHHHHHHHH
Confidence 9999999999888888876 56899999999999999999988763 3358999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeeEEEEecCc
Q 039397 191 TFYESLRFELNDEVGITIATHGW 213 (349)
Q Consensus 191 ~l~~~la~el~~~I~v~~v~PG~ 213 (349)
.|++..+.. + ..+.+|.-|+
T Consensus 158 a~a~~~~~~-g--~~~~sI~wg~ 177 (181)
T PF08659_consen 158 ALARQRRSR-G--LPAVSINWGA 177 (181)
T ss_dssp HHHHHHHHT-T--SEEEEEEE-E
T ss_pred HHHHHHHhC-C--CCEEEEEccc
Confidence 999987653 2 3566666554
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.4e-16 Score=147.43 Aligned_cols=205 Identities=17% Similarity=0.084 Sum_probs=130.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEE-EecCcch--hhhHHHHhcCCCCeEEEEEecccc-------C--CCcceee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVL-VARRENR--LQGSTIDEYNPINEVTLVSLNNKE-------S--KAVDHLV 115 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~-~~r~~~~--l~~~~~~~~~~~~~~~~~~~d~~~-------~--g~iDvlV 115 (349)
|++|||||+|+||.+++++|.++|++|++ ++|.... ..... .+. ....+.++.+|... . .++|++|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi 79 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PVA-QSERFAFEKVDICDRAELARVFTEHQPDCVM 79 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hcc-cCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence 58999999999999999999999998554 4544321 11111 111 12245566677221 1 2589999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccc---cc---CCCeEEEEecccccc-------------CC
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL---HE---SNGRVVVNASVENWL-------------PL 176 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m---~~---~~g~IV~isS~~~~~-------------~~ 176 (349)
|+||..... . +.++++..+++|+.|+.++++++.+.| .+ +..++|++||.+.+. +.
T Consensus 80 h~A~~~~~~----~-~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~ 154 (355)
T PRK10217 80 HLAAESHVD----R-SIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPY 154 (355)
T ss_pred ECCcccCcc----h-hhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCC
Confidence 999975321 1 224568899999999999999998753 11 125899999865322 22
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCC-cc-----cc-ccchhhhhHHHHhhhcCCCCHHHH
Q 039397 177 PRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKG-KF-----ML-EDGAEMQWKEEREVHVAGGPVEDF 249 (349)
Q Consensus 177 ~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~-~~-----~~-~~~~~~~~~~~~~~~~~~~~~edv 249 (349)
.+.+.|+.||.+.+.+++.++.+++ +.+..+.|+.+-.|-... .. .. ..+...............+.++|+
T Consensus 155 ~p~s~Y~~sK~~~e~~~~~~~~~~~--~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~ 232 (355)
T PRK10217 155 APSSPYSASKASSDHLVRAWLRTYG--LPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDH 232 (355)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhC--CCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHH
Confidence 3467899999999999999988765 566666776554442210 00 00 000000000011123457889999
Q ss_pred HHHHHHHHhcCC
Q 039397 250 ARLIVSGACRGD 261 (349)
Q Consensus 250 A~~i~~l~~~~~ 261 (349)
|++++.++..+.
T Consensus 233 a~a~~~~~~~~~ 244 (355)
T PRK10217 233 ARALYCVATTGK 244 (355)
T ss_pred HHHHHHHHhcCC
Confidence 999999988753
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.6e-16 Score=151.23 Aligned_cols=171 Identities=15% Similarity=0.055 Sum_probs=117.5
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-------hhh---------HHHHh-cCCCCeEEEEEec
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-------LQG---------STIDE-YNPINEVTLVSLN 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-------l~~---------~~~~~-~~~~~~~~~~~~d 104 (349)
+.++++|+||||||+|+||++++++|+++|++|++++|.... .+. ..... ......+.++.+|
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 121 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD 121 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence 346788999999999999999999999999999998753211 000 00000 0112246677777
Q ss_pred cccC---------CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC
Q 039397 105 NKES---------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP 175 (349)
Q Consensus 105 ~~~~---------g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~ 175 (349)
.... .++|++||+|+.... ..... +.++++..+++|+.|+.++++++...- .+.++|++||.+.+..
T Consensus 122 l~d~~~v~~~l~~~~~D~ViHlAa~~~~-~~~~~-~~~~~~~~~~~Nv~gt~nlleaa~~~g--v~~~~V~~SS~~vYG~ 197 (442)
T PLN02572 122 ICDFEFLSEAFKSFEPDAVVHFGEQRSA-PYSMI-DRSRAVFTQHNNVIGTLNVLFAIKEFA--PDCHLVKLGTMGEYGT 197 (442)
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCcccC-hhhhc-ChhhHHHHHHHHHHHHHHHHHHHHHhC--CCccEEEEecceecCC
Confidence 3211 258999999976432 22221 335567788999999999999986542 1148999999765421
Q ss_pred ------------------------CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCC
Q 039397 176 ------------------------LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEM 218 (349)
Q Consensus 176 ------------------------~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~ 218 (349)
......|+.||.+.+.+++..+..++ +.+.++.|+.+-.+.
T Consensus 198 ~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~g--l~~v~lR~~~vyGp~ 262 (442)
T PLN02572 198 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVR 262 (442)
T ss_pred CCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcC--CCEEEEecccccCCC
Confidence 11235799999999999988876544 788888887776654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.70 E-value=3e-16 Score=148.00 Aligned_cols=209 Identities=14% Similarity=0.006 Sum_probs=129.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-----hhhHHHHh-cCCCCeEEEEEecccc-------C--CCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-----LQGSTIDE-YNPINEVTLVSLNNKE-------S--KAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-----l~~~~~~~-~~~~~~~~~~~~d~~~-------~--g~iD 112 (349)
|++|||||+|+||.+++++|+++|++|++++|+.+. ++.+..+. ......+.++.+|... . -++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 689999999999999999999999999999998642 22211111 1112346777888322 1 1479
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCCCchh
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLPRMSL 181 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~~~~~ 181 (349)
++||+|+........ +.-...+++|+.|+.++++++.+.-.++..++|++||.+.+- +....+.
T Consensus 81 ~ViH~Aa~~~~~~~~-----~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~ 155 (343)
T TIGR01472 81 EIYNLAAQSHVKVSF-----EIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSP 155 (343)
T ss_pred EEEECCcccccchhh-----hChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCCh
Confidence 999999976432211 223577889999999999999874222224799999865432 1224568
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC----eeEEEEecCcccCCCCCCc---ccc-ccch-hhhhHHHHhhhcCCCCHHHHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDE----VGITIATHGWIGIEMTKGK---FML-EDGA-EMQWKEEREVHVAGGPVEDFARL 252 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~----I~v~~v~PG~v~T~~~~~~---~~~-~~~~-~~~~~~~~~~~~~~~~~edvA~~ 252 (349)
|++||.+.+.+++.++.+++-. +.++...|+.-.+-+.... ... ..+. ...+..........+.++|+|++
T Consensus 156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a 235 (343)
T TIGR01472 156 YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEA 235 (343)
T ss_pred hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHH
Confidence 9999999999999998876433 1223333442111000000 000 0000 00000111123456788999999
Q ss_pred HHHHHhcCC
Q 039397 253 IVSGACRGD 261 (349)
Q Consensus 253 i~~l~~~~~ 261 (349)
++.++..+.
T Consensus 236 ~~~~~~~~~ 244 (343)
T TIGR01472 236 MWLMLQQDK 244 (343)
T ss_pred HHHHHhcCC
Confidence 999987653
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.4e-15 Score=137.22 Aligned_cols=202 Identities=16% Similarity=0.055 Sum_probs=130.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchh-hhHHHHhcCCCCeEEEEEecccc-------CC--Ccceeee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRL-QGSTIDEYNPINEVTLVSLNNKE-------SK--AVDHLVN 116 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l-~~~~~~~~~~~~~~~~~~~d~~~-------~g--~iDvlVn 116 (349)
+++||||+|+||.+++++|+++| ++|++.+|..... .+....+.. ...+.++.+|... .. ++|++||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 79 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAVVH 79 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence 48999999999999999999988 7899887743211 111112211 1245666777221 22 3899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC------------CCCchhhHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP------------LPRMSLYAS 184 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~------------~~~~~~Y~a 184 (349)
+|+...... ..+..+..+++|+.++.++++++...+. +.++|++||...+.. ......|+.
T Consensus 80 ~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~ 152 (317)
T TIGR01181 80 FAAESHVDR-----SISGPAAFIETNVVGTYTLLEAVRKYWH--EFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSA 152 (317)
T ss_pred cccccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHhcCC--CceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHH
Confidence 998754221 1245678899999999999998877643 347999998653321 113357999
Q ss_pred HHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCc-cccc------cchhhhhHHHHhhhcCCCCHHHHHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGK-FMLE------DGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
+|++.+.+++.++.+.+ +++.++.|+.+-.+..... .... .+...............+.++|+|+++..++
T Consensus 153 sK~~~e~~~~~~~~~~~--~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~ 230 (317)
T TIGR01181 153 SKAASDHLVRAYHRTYG--LPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVL 230 (317)
T ss_pred HHHHHHHHHHHHHHHhC--CCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHH
Confidence 99999999999887654 6888888887765532110 0000 0000000000011224567899999999998
Q ss_pred hcC
Q 039397 258 CRG 260 (349)
Q Consensus 258 ~~~ 260 (349)
.+.
T Consensus 231 ~~~ 233 (317)
T TIGR01181 231 EKG 233 (317)
T ss_pred cCC
Confidence 764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.1e-14 Score=136.64 Aligned_cols=206 Identities=12% Similarity=-0.029 Sum_probs=135.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC------CCCeEEEEEecccc-------CCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN------PINEVTLVSLNNKE-------SKA 110 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~~~~d~~~-------~g~ 110 (349)
++++|+||||||+|+||.+++++|+++|++|+++.|+.+..+.+. ++.. ....+.++.+|..+ ...
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 578899999999999999999999999999999988876554432 2210 01245667777322 345
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc-cc--------C------
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN-WL--------P------ 175 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~-~~--------~------ 175 (349)
+|.++|.|+......... ..+...++|+.++.++++++...- +-.++|++||.++ .. +
T Consensus 129 ~d~V~hlA~~~~~~~~~~-----~~~~~~~~nv~gt~~llea~~~~~--~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~ 201 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSG-----YTKSMAELEAKASENVIEACVRTE--SVRKCVFTSSLLACVWRQNYPHDLPPVIDEE 201 (367)
T ss_pred ccEEEecCeeeccccccc-----ccchhhhhhHHHHHHHHHHHHhcC--CccEEEEeccHHHhcccccCCCCCCcccCCC
Confidence 899999998754332111 113456789999999999876421 2248999999642 11 0
Q ss_pred --------CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchh--hhhHHHHhhhcCCCC
Q 039397 176 --------LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAE--MQWKEEREVHVAGGP 245 (349)
Q Consensus 176 --------~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 245 (349)
......|+.||.+.+.+++.++.+.+ +++++++|+.+.+|.........-... ...............
T Consensus 202 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g--l~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~ 279 (367)
T PLN02686 202 SWSDESFCRDNKLWYALGKLKAEKAAWRAARGKG--LKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATAD 279 (367)
T ss_pred CCCChhhcccccchHHHHHHHHHHHHHHHHHhcC--ceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEE
Confidence 01234699999999999998876643 899999999998885321100000000 000000011123677
Q ss_pred HHHHHHHHHHHHhc
Q 039397 246 VEDFARLIVSGACR 259 (349)
Q Consensus 246 ~edvA~~i~~l~~~ 259 (349)
++|+|++++.+++.
T Consensus 280 V~Dva~A~~~al~~ 293 (367)
T PLN02686 280 VERLAEAHVCVYEA 293 (367)
T ss_pred HHHHHHHHHHHHhc
Confidence 89999999999974
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=137.71 Aligned_cols=203 Identities=14% Similarity=0.061 Sum_probs=126.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCcc--hhhhHHHHhcCCCCeEEEEEecccc---------CCCcceeee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKAN-LVLVARREN--RLQGSTIDEYNPINEVTLVSLNNKE---------SKAVDHLVN 116 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~~--~l~~~~~~~~~~~~~~~~~~~d~~~---------~g~iDvlVn 116 (349)
++|||||+|+||.+++++|+++|++ |+.+++... ..+... .+. ....+.++.+|... ..++|++||
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 5999999999999999999999986 555555321 122111 111 12345666777221 136899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc------CCCeEEEEeccccccC---------------
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE------SNGRVVVNASVENWLP--------------- 175 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~------~~g~IV~isS~~~~~~--------------- 175 (349)
+||....... .+..+..+++|+.|+.++++++.+.|.+ +..++|++||.+.+..
T Consensus 80 ~A~~~~~~~~-----~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~ 154 (352)
T PRK10084 80 LAAESHVDRS-----ITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPL 154 (352)
T ss_pred CCcccCCcch-----hcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCC
Confidence 9997533211 1234678999999999999999887632 1248999998654321
Q ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCC--Ccccc-----ccchhhhhHHHHhhhcC
Q 039397 176 ------LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTK--GKFML-----EDGAEMQWKEEREVHVA 242 (349)
Q Consensus 176 ------~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~--~~~~~-----~~~~~~~~~~~~~~~~~ 242 (349)
......|+.||.+.+.+++.++.+++ +.+..+.|+.+-.+-.. ..... ..+..............
T Consensus 155 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g--~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 232 (352)
T PRK10084 155 FTETTAYAPSSPYSASKASSDHLVRAWLRTYG--LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRD 232 (352)
T ss_pred ccccCCCCCCChhHHHHHHHHHHHHHHHHHhC--CCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEe
Confidence 12346899999999999999988765 34455566555443211 00000 00000000000111234
Q ss_pred CCCHHHHHHHHHHHHhcC
Q 039397 243 GGPVEDFARLIVSGACRG 260 (349)
Q Consensus 243 ~~~~edvA~~i~~l~~~~ 260 (349)
.+.++|+|++++.+++.+
T Consensus 233 ~v~v~D~a~a~~~~l~~~ 250 (352)
T PRK10084 233 WLYVEDHARALYKVVTEG 250 (352)
T ss_pred eEEHHHHHHHHHHHHhcC
Confidence 678899999999988765
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.4e-14 Score=133.02 Aligned_cols=198 Identities=17% Similarity=0.127 Sum_probs=132.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhh---hHHHHh---c--CC--C-CeEEEEEecccc--------
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQ---GSTIDE---Y--NP--I-NEVTLVSLNNKE-------- 107 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~---~~~~~~---~--~~--~-~~~~~~~~d~~~-------- 107 (349)
+|+||||+|+||++++++|+++| ++|+++.|+.+... .+.+.+ . .. . ..+..+.+|...
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999999 78999999865321 111111 0 00 0 357777777321
Q ss_pred -----CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC-----
Q 039397 108 -----SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP----- 177 (349)
Q Consensus 108 -----~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~----- 177 (349)
.+++|++||||+.... ...++...++|+.|+.++++.+... +..+++++||.+.+....
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~--------~~~~~~~~~~nv~g~~~ll~~a~~~---~~~~~v~iSS~~v~~~~~~~~~~ 149 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNW--------VYPYSELRAANVLGTREVLRLAASG---RAKPLHYVSTISVLAAIDLSTVT 149 (367)
T ss_pred HHHHHHhhCCEEEeCCcEecc--------CCcHHHHhhhhhHHHHHHHHHHhhC---CCceEEEEccccccCCcCCCCcc
Confidence 2568999999996531 1335678899999999999988653 224699999987654311
Q ss_pred -----------CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHH-H--------
Q 039397 178 -----------RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE-R-------- 237 (349)
Q Consensus 178 -----------~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~-------- 237 (349)
....|+.||.+.+.+.+..+.. .++++++.||.+.++...+.....+- ....... .
T Consensus 150 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---g~~~~i~Rpg~v~G~~~~g~~~~~~~-~~~~~~~~~~~~~~p~~ 225 (367)
T TIGR01746 150 EDDAIVTPPPGLAGGYAQSKWVAELLVREASDR---GLPVTIVRPGRILGNSYTGAINSSDI-LWRMVKGCLALGAYPDS 225 (367)
T ss_pred ccccccccccccCCChHHHHHHHHHHHHHHHhc---CCCEEEECCCceeecCCCCCCCchhH-HHHHHHHHHHhCCCCCC
Confidence 1346999999999998876542 38999999999987632221111100 0000000 0
Q ss_pred h-hhcCCCCHHHHHHHHHHHHhcCC
Q 039397 238 E-VHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 238 ~-~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
. .....++++|+|++++.++....
T Consensus 226 ~~~~~~~~~vddva~ai~~~~~~~~ 250 (367)
T TIGR01746 226 PELTEDLTPVDYVARAIVALSSQPA 250 (367)
T ss_pred CccccCcccHHHHHHHHHHHHhCCC
Confidence 0 01236788999999999987654
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=135.44 Aligned_cols=193 Identities=16% Similarity=0.035 Sum_probs=131.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnAg~ 120 (349)
++++||||+|+||.++++.|+++|++|++++|+.+...... ...+..+.+|. +...++|++||+|+.
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~ 74 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE------GLDVEIVEGDLRDPASLRKAVAGCRALFHVAAD 74 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc------cCCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence 36999999999999999999999999999999876543211 11355666662 224468999999975
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC---------------CchhhHHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP---------------RMSLYASA 185 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~---------------~~~~Y~as 185 (349)
... ..++.+..+++|+.++.++++++... +.+++|++||...+.+.+ ....|+.+
T Consensus 75 ~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s 144 (328)
T TIGR03466 75 YRL-------WAPDPEEMYAANVEGTRNLLRAALEA---GVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRS 144 (328)
T ss_pred ccc-------CCCCHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHH
Confidence 311 11345788999999999999988643 236899999977654211 13479999
Q ss_pred HHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchh-hhh-----HHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 186 KAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAE-MQW-----KEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
|.+.+.+++.++.+.+ +.++.+.|+.+-.+....... .... ... ..........+.++|+|++++.++..
T Consensus 145 K~~~e~~~~~~~~~~~--~~~~ilR~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~ 220 (328)
T TIGR03466 145 KFLAEQAALEMAAEKG--LPVVIVNPSTPIGPRDIKPTP--TGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALER 220 (328)
T ss_pred HHHHHHHHHHHHHhcC--CCEEEEeCCccCCCCCCCCCc--HHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhC
Confidence 9999999999876543 788999998775543211100 0000 000 00001112456789999999999876
Q ss_pred C
Q 039397 260 G 260 (349)
Q Consensus 260 ~ 260 (349)
+
T Consensus 221 ~ 221 (328)
T TIGR03466 221 G 221 (328)
T ss_pred C
Confidence 5
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.7e-14 Score=136.29 Aligned_cols=206 Identities=13% Similarity=-0.012 Sum_probs=133.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-----CCCCeEEEEEecccc-------CCCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-----NPINEVTLVSLNNKE-------SKAV 111 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-----~~~~~~~~~~~d~~~-------~g~i 111 (349)
.+++|+|+||||+|.||.+++++|.++|++|++++|..........+.. .....+.++.+|..+ ...+
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 4677899999999999999999999999999999986543222111110 111246677777322 3468
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCch
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMS 180 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~ 180 (349)
|++||.|+........ ++....+++|+.|+.++++++... +-.++|++||.+.+... ....
T Consensus 92 d~ViHlAa~~~~~~~~-----~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~ 163 (348)
T PRK15181 92 DYVLHQAALGSVPRSL-----KDPIATNSANIDGFLNMLTAARDA---HVSSFTYAASSSTYGDHPDLPKIEERIGRPLS 163 (348)
T ss_pred CEEEECccccCchhhh-----hCHHHHHHHHHHHHHHHHHHHHHc---CCCeEEEeechHhhCCCCCCCCCCCCCCCCCC
Confidence 9999999975432211 223467899999999999988543 22589999987544211 1245
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCc--ccc---------ccchhhhhHHHHhhhcCCCCHHHH
Q 039397 181 LYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGK--FML---------EDGAEMQWKEEREVHVAGGPVEDF 249 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~edv 249 (349)
.|+.||.+.+.+.+.++.+.+ +++..+.|+.+-.|-.... ... ..+...............+..+|+
T Consensus 164 ~Y~~sK~~~e~~~~~~~~~~~--~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~ 241 (348)
T PRK15181 164 PYAVTKYVNELYADVFARSYE--FNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV 241 (348)
T ss_pred hhhHHHHHHHHHHHHHHHHhC--CCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHH
Confidence 799999999999988776543 7888888877765532110 000 000000000011112345678999
Q ss_pred HHHHHHHHhc
Q 039397 250 ARLIVSGACR 259 (349)
Q Consensus 250 A~~i~~l~~~ 259 (349)
|++++.++..
T Consensus 242 a~a~~~~~~~ 251 (348)
T PRK15181 242 IQANLLSATT 251 (348)
T ss_pred HHHHHHHHhc
Confidence 9999987753
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=8e-14 Score=130.98 Aligned_cols=157 Identities=15% Similarity=0.063 Sum_probs=106.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEeccc---------cCCCcceeeecC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNNK---------ESKAVDHLVNTA 118 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~~---------~~g~iDvlVnnA 118 (349)
+++||||+|+||++++++|+++|++|++++|...........+ .........+..|.. ...++|++||+|
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a 81 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHFA 81 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEECC
Confidence 5999999999999999999999999999987543322221111 111223445555521 123689999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------------CCchhhHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------PRMSLYASAK 186 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------~~~~~Y~asK 186 (349)
|....... .+.....+++|+.++.++++++... +.+++|++||...+... .....|+.+|
T Consensus 82 ~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK 153 (338)
T PRK10675 82 GLKAVGES-----VQKPLEYYDNNVNGTLRLISAMRAA---NVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSK 153 (338)
T ss_pred ccccccch-----hhCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHH
Confidence 97543221 1234578899999999999876532 23689999997543211 2357899999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcc
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWI 214 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v 214 (349)
.+.+.+++.++.+... +++..+.++.+
T Consensus 154 ~~~E~~~~~~~~~~~~-~~~~ilR~~~v 180 (338)
T PRK10675 154 LMVEQILTDLQKAQPD-WSIALLRYFNP 180 (338)
T ss_pred HHHHHHHHHHHHhcCC-CcEEEEEeeee
Confidence 9999999998765432 45555555433
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.8e-14 Score=133.28 Aligned_cols=160 Identities=13% Similarity=0.135 Sum_probs=111.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH---HHh-cCCCCeEEEEEecccc---------CCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST---IDE-YNPINEVTLVSLNNKE---------SKA 110 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~---~~~-~~~~~~~~~~~~d~~~---------~g~ 110 (349)
.|++|+++||||+|+||.+++++|+++|++|++++|......+.. .+. ......+..+.+|... ...
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 567899999999999999999999999999999987643322111 111 1112346667777221 136
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCCCc
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLPRM 179 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~~~ 179 (349)
+|++||+||...... +.+++.+.+++|+.++.++++++... +.+++|++||...+. +....
T Consensus 82 ~d~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~ 153 (352)
T PLN02240 82 FDAVIHFAGLKAVGE-----SVAKPLLYYDNNLVGTINLLEVMAKH---GCKKLVFSSSATVYGQPEEVPCTEEFPLSAT 153 (352)
T ss_pred CCEEEEccccCCccc-----cccCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEccHHHhCCCCCCCCCCCCCCCCC
Confidence 899999999753221 22456789999999999999876432 236899999964332 11235
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecC
Q 039397 180 SLYASAKAALVTFYESLRFELNDEVGITIATHG 212 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG 212 (349)
..|+.||.+.+.+++.++.+..+ +.+..+.++
T Consensus 154 ~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~R~~ 185 (352)
T PLN02240 154 NPYGRTKLFIEEICRDIHASDPE-WKIILLRYF 185 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeec
Confidence 68999999999999988765222 455555543
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.9e-14 Score=135.71 Aligned_cols=205 Identities=12% Similarity=0.016 Sum_probs=131.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEeccc-------cCCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEY-NPINEVTLVSLNNK-------ESKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d~~-------~~g~iDvlV 115 (349)
.+.++||||||+|.||.+++++|+++ |++|++++|+.++......... .....+.++.+|.. ....+|++|
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi 91 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI 91 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence 45568999999999999999999998 5999999988655443221100 11235677777732 234589999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC---------C---------
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL---------P--------- 177 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~---------~--------- 177 (349)
|+|+......... +-.+.+..|+.++.++++++... +.++|++||...+-.. |
T Consensus 92 HlAa~~~~~~~~~-----~~~~~~~~n~~gt~~ll~aa~~~----~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~ 162 (386)
T PLN02427 92 NLAAICTPADYNT-----RPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYV 162 (386)
T ss_pred EcccccChhhhhh-----ChHHHHHHHHHHHHHHHHHHHhc----CCEEEEEeeeeeeCCCcCCCCCccccccccccccc
Confidence 9999754332221 11345678999999999887532 3589999997533210 0
Q ss_pred ---------------CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcc---ccccc--hhh-----h
Q 039397 178 ---------------RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKF---MLEDG--AEM-----Q 232 (349)
Q Consensus 178 ---------------~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~---~~~~~--~~~-----~ 232 (349)
....|+.||.+.+.+++..+...+ +.+..+.|+.+-.+...... ..... ... .
T Consensus 163 ~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~ 240 (386)
T PLN02427 163 LKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENG--LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 240 (386)
T ss_pred ccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcC--CceEEecccceeCCCCCccccccccccccchHHHHHHHH
Confidence 123699999999999987764432 78899999888766421100 00000 000 0
Q ss_pred hHHH--------HhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 233 WKEE--------REVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 233 ~~~~--------~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.... .......+.++|+|++++.++++.
T Consensus 241 ~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~ 276 (386)
T PLN02427 241 LLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 276 (386)
T ss_pred HhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc
Confidence 0000 011124678899999999999864
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-13 Score=127.15 Aligned_cols=159 Identities=11% Similarity=0.039 Sum_probs=111.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc---------CCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE---------SKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~---------~g~iDvlVnnAg 119 (349)
+++||||+|+||++++++|.++|++|++++|......+........ ..+..+.+|... .+++|++|||||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag 79 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAG 79 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHhCCCcEEEECcc
Confidence 4799999999999999999999999999876543322222222111 145566677221 247999999999
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHHHH
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAKAA 188 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaa 188 (349)
...... ..++..+.+++|+.++..+++++... +.+++|++||...+... .....|+.+|++
T Consensus 80 ~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~ 151 (328)
T TIGR01179 80 LIAVGE-----SVQDPLKYYRNNVVNTLNLLEAMQQT---GVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLM 151 (328)
T ss_pred ccCcch-----hhcCchhhhhhhHHHHHHHHHHHHhc---CCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHH
Confidence 754322 12334577899999999999986543 23689999886543211 124679999999
Q ss_pred HHHHHHHHHHHhcCCeeEEEEecCcccCC
Q 039397 189 LVTFYESLRFELNDEVGITIATHGWIGIE 217 (349)
Q Consensus 189 l~~l~~~la~el~~~I~v~~v~PG~v~T~ 217 (349)
.+.+++.++.+.. .++++.+.|+.+..+
T Consensus 152 ~e~~~~~~~~~~~-~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 152 SERILRDLSKADP-GLSYVILRYFNVAGA 179 (328)
T ss_pred HHHHHHHHHHhcc-CCCEEEEecCcccCC
Confidence 9999999976522 278888988776655
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-13 Score=134.37 Aligned_cols=203 Identities=13% Similarity=0.062 Sum_probs=129.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--ccCCCcceeeecCcCCCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--KESKAVDHLVNTASLGHT 123 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--~~~g~iDvlVnnAg~~~~ 123 (349)
++++||||||+|.||.+++++|.++|++|++++|......+..... ....+...+..|. ....++|++||.|+...+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~-~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~~ 196 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH-FSNPNFELIRHDVVEPILLEVDQIYHLACPASP 196 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh-ccCCceEEEECCccChhhcCCCEEEEeeeecch
Confidence 5689999999999999999999999999999987543222111111 1122455566662 223468999999987543
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc----------------CCCCchhhHHHHH
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL----------------PLPRMSLYASAKA 187 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~----------------~~~~~~~Y~asKa 187 (349)
.... ++....+++|+.|+.++++++... +.++|++||...+. +......|+.+|.
T Consensus 197 ~~~~-----~~p~~~~~~Nv~gt~nLleaa~~~----g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~ 267 (442)
T PLN02206 197 VHYK-----FNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKR 267 (442)
T ss_pred hhhh-----cCHHHHHHHHHHHHHHHHHHHHHh----CCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHH
Confidence 2211 223678899999999999988643 34899999986542 1112467999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCC---Cc-cccc-----cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTK---GK-FMLE-----DGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~---~~-~~~~-----~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+.+.+++.+..+.+ +.+..+.|+.+-.+... .. .... ................++.++|+|++++.+++
T Consensus 268 ~aE~~~~~y~~~~g--~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e 345 (442)
T PLN02206 268 TAETLTMDYHRGAN--VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 345 (442)
T ss_pred HHHHHHHHHHHHhC--CCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHh
Confidence 99999888765543 67777777655444211 00 0000 00000000000111235678999999999987
Q ss_pred cC
Q 039397 259 RG 260 (349)
Q Consensus 259 ~~ 260 (349)
..
T Consensus 346 ~~ 347 (442)
T PLN02206 346 GE 347 (442)
T ss_pred cC
Confidence 54
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.54 E-value=8e-14 Score=127.53 Aligned_cols=196 Identities=15% Similarity=0.015 Sum_probs=130.8
Q ss_pred EEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeecCcCC
Q 039397 51 IITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNTASLG 121 (349)
Q Consensus 51 lVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnnAg~~ 121 (349)
|||||+|.||.+++++|.++| ++|.+.+++....... .... .....++.+| .+...++|++||.|+..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~-~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~ 77 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQK-SGVKEYIQGDITDPESLEEALEGVDVVFHTAAPV 77 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhc-ccceeEEEeccccHHHHHHHhcCCceEEEeCccc
Confidence 699999999999999999999 7999999876543211 1111 1122367777 23456789999999976
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC---C--------------CCchhhHH
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP---L--------------PRMSLYAS 184 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~---~--------------~~~~~Y~a 184 (349)
.... ....+.++++|+.|+-++++++... +-.++|++||.++..+ . .....|+.
T Consensus 78 ~~~~------~~~~~~~~~vNV~GT~nvl~aa~~~---~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~ 148 (280)
T PF01073_consen 78 PPWG------DYPPEEYYKVNVDGTRNVLEAARKA---GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAE 148 (280)
T ss_pred cccC------cccHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHH
Confidence 4432 1335789999999999999999754 3368999999987654 1 12347999
Q ss_pred HHHHHHHHHHHHHH-HhcC--CeeEEEEecCcccCCCCCCccccccch--h--hhh-HHHHhhhcCCCCHHHHHHHHHHH
Q 039397 185 AKAALVTFYESLRF-ELND--EVGITIATHGWIGIEMTKGKFMLEDGA--E--MQW-KEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 185 sKaal~~l~~~la~-el~~--~I~v~~v~PG~v~T~~~~~~~~~~~~~--~--~~~-~~~~~~~~~~~~~edvA~~i~~l 256 (349)
||+..|.++..... ++.. +++..+|+|..|-.|............ . ... ............++++|++++.+
T Consensus 149 SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA 228 (280)
T PF01073_consen 149 SKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLA 228 (280)
T ss_pred HHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHH
Confidence 99999999877653 2222 388999999777665432221100000 0 000 01111223467789999999876
Q ss_pred Hh
Q 039397 257 AC 258 (349)
Q Consensus 257 ~~ 258 (349)
+.
T Consensus 229 ~~ 230 (280)
T PF01073_consen 229 AQ 230 (280)
T ss_pred HH
Confidence 54
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.1e-13 Score=130.70 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=106.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh--HHHHhcCCCCeEEEEEeccc----------cCC-
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVSLNNK----------ESK- 109 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~--~~~~~~~~~~~~~~~~~d~~----------~~g- 109 (349)
...++++++||||+|+||++++++|+++|++|++++|+..+.+. ...+.......+..+.+|.. ..+
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 34567899999999999999999999999999999998765432 11111111234667777721 111
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|++|||+|..... ....+++|+.++.++++++... +.+++|++||..... ....|..+|...
T Consensus 136 ~~D~Vi~~aa~~~~~----------~~~~~~vn~~~~~~ll~aa~~~---gv~r~V~iSS~~v~~---p~~~~~~sK~~~ 199 (390)
T PLN02657 136 PVDVVVSCLASRTGG----------VKDSWKIDYQATKNSLDAGREV---GAKHFVLLSAICVQK---PLLEFQRAKLKF 199 (390)
T ss_pred CCcEEEECCccCCCC----------CccchhhHHHHHHHHHHHHHHc---CCCEEEEEeeccccC---cchHHHHHHHHH
Confidence 699999999843211 1234577888888888887532 236899999987643 345688999988
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCccc
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIG 215 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~ 215 (349)
+...+. ....++.+.+.|+.+-
T Consensus 200 E~~l~~----~~~gl~~tIlRp~~~~ 221 (390)
T PLN02657 200 EAELQA----LDSDFTYSIVRPTAFF 221 (390)
T ss_pred HHHHHh----ccCCCCEEEEccHHHh
Confidence 877654 1223888999997654
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-13 Score=131.84 Aligned_cols=202 Identities=12% Similarity=0.051 Sum_probs=128.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc--cCCCcceeeecCcCCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK--ESKAVDHLVNTASLGHTF 124 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~--~~g~iDvlVnnAg~~~~~ 124 (349)
.++|+||||+|.||.+++++|.++|++|++++|............. ....+..+..|.. ...++|++||+|+.....
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~D~ViHlAa~~~~~ 198 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPILLEVDQIYHLACPASPV 198 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECccccccccCCCEEEECceeccch
Confidence 4589999999999999999999999999999986432111111111 1124556666632 235689999999875433
Q ss_pred cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc----------------CCCCchhhHHHHHH
Q 039397 125 FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL----------------PLPRMSLYASAKAA 188 (349)
Q Consensus 125 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~----------------~~~~~~~Y~asKaa 188 (349)
... .+-...+++|+.|+.++++++... +.++|++||.+.+. +......|+.+|.+
T Consensus 199 ~~~-----~~p~~~~~~Nv~gT~nLleaa~~~----g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~ 269 (436)
T PLN02166 199 HYK-----YNPVKTIKTNVMGTLNMLGLAKRV----GARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRT 269 (436)
T ss_pred hhc-----cCHHHHHHHHHHHHHHHHHHHHHh----CCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHH
Confidence 221 123678999999999999988653 24899998876432 11124569999999
Q ss_pred HHHHHHHHHHHhcCCeeEEEEecCcccCCCCC----Ccccc-----ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 189 LVTFYESLRFELNDEVGITIATHGWIGIEMTK----GKFML-----EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 189 l~~l~~~la~el~~~I~v~~v~PG~v~T~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.+.+++....... +.+..+.|+.+-.+... ..... ..+..............++..+|+|+++..+++.
T Consensus 270 aE~~~~~y~~~~~--l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~ 347 (436)
T PLN02166 270 AETLAMDYHRGAG--VEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEG 347 (436)
T ss_pred HHHHHHHHHHHhC--CCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence 9999988765543 67777777655444211 00000 0000000000011123467789999999999875
Q ss_pred C
Q 039397 260 G 260 (349)
Q Consensus 260 ~ 260 (349)
+
T Consensus 348 ~ 348 (436)
T PLN02166 348 E 348 (436)
T ss_pred C
Confidence 4
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.9e-13 Score=126.93 Aligned_cols=197 Identities=13% Similarity=0.080 Sum_probs=128.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc--------cCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK--------ESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~--------~~g~iDvlVnnA 118 (349)
++|+||||+|.||.+++++|+++ |++|++++|+.+.... +. ....+.++..|.. ...++|++||+|
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a 76 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV-NHPRMHFFEGDITINKEWIEYHVKKCDVILPLV 76 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc-cCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence 47999999999999999999986 7999999987644322 11 1124666677742 124689999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------------------CCch
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------------PRMS 180 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------------~~~~ 180 (349)
+...+.... ++-+..+++|+.++.++++++... +.++|++||...+... ....
T Consensus 77 a~~~~~~~~-----~~p~~~~~~n~~~~~~ll~aa~~~----~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~ 147 (347)
T PRK11908 77 AIATPATYV-----KQPLRVFELDFEANLPIVRSAVKY----GKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRW 147 (347)
T ss_pred ccCChHHhh-----cCcHHHHHHHHHHHHHHHHHHHhc----CCeEEEEecceeeccCCCcCcCccccccccCcCCCccc
Confidence 976443222 223577899999999999988643 3589999997543211 0123
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc---------------chhhhhHHHHhhhcCCCC
Q 039397 181 LYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED---------------GAEMQWKEEREVHVAGGP 245 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~ 245 (349)
.|+.||.+.+.+.+.++.+.. +.+..+.|+.+-.+.......... +...............+.
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~~--~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~ 225 (347)
T PRK11908 148 IYACSKQLMDRVIWAYGMEEG--LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTD 225 (347)
T ss_pred hHHHHHHHHHHHHHHHHHHcC--CCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeecccc
Confidence 699999999999998876543 566777776654443211000000 000000000112235788
Q ss_pred HHHHHHHHHHHHhcC
Q 039397 246 VEDFARLIVSGACRG 260 (349)
Q Consensus 246 ~edvA~~i~~l~~~~ 260 (349)
.+|+|++++.+++..
T Consensus 226 v~D~a~a~~~~~~~~ 240 (347)
T PRK11908 226 IDDGIDALMKIIENK 240 (347)
T ss_pred HHHHHHHHHHHHhCc
Confidence 999999999999864
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.9e-13 Score=136.51 Aligned_cols=199 Identities=11% Similarity=0.054 Sum_probs=132.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc--------cCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK--------ESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~--------~~g~iDvlVn 116 (349)
++++||||||+|.||.+++++|.++ |++|++++|........ .. ...+.++.+|.. ...++|++||
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~~--~~~~~~~~gDl~d~~~~l~~~l~~~D~ViH 388 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---LG--HPRFHFVEGDISIHSEWIEYHIKKCDVVLP 388 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---cC--CCceEEEeccccCcHHHHHHHhcCCCEEEE
Confidence 5679999999999999999999986 79999999976543221 11 124566666632 1346899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC---------------C---C
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL---------------P---R 178 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~---------------~---~ 178 (349)
.|+...+.... ++.+..+++|+.++.++++++... +.++|++||...+... | .
T Consensus 389 lAa~~~~~~~~-----~~~~~~~~~Nv~~t~~ll~a~~~~----~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p 459 (660)
T PRK08125 389 LVAIATPIEYT-----RNPLRVFELDFEENLKIIRYCVKY----NKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQ 459 (660)
T ss_pred CccccCchhhc-----cCHHHHHHhhHHHHHHHHHHHHhc----CCeEEEEcchhhcCCCCCCCcCccccccccCCCCCC
Confidence 99976543222 223567899999999999998754 2589999996543210 1 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc---cc------------chhhhhHHHHhhhcCC
Q 039397 179 MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML---ED------------GAEMQWKEEREVHVAG 243 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~---~~------------~~~~~~~~~~~~~~~~ 243 (349)
...|+.||.+.+.+++.++.+.+ +++..+.|+.+..+........ .. +....+..........
T Consensus 460 ~s~Yg~sK~~~E~~~~~~~~~~g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~ 537 (660)
T PRK08125 460 RWIYSVSKQLLDRVIWAYGEKEG--LRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCF 537 (660)
T ss_pred ccchHHHHHHHHHHHHHHHHhcC--CceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeece
Confidence 23699999999999999876654 6778888877765532110000 00 0000000001112346
Q ss_pred CCHHHHHHHHHHHHhcC
Q 039397 244 GPVEDFARLIVSGACRG 260 (349)
Q Consensus 244 ~~~edvA~~i~~l~~~~ 260 (349)
+.++|+|++++.+++..
T Consensus 538 i~v~Dva~a~~~~l~~~ 554 (660)
T PRK08125 538 TDIRDGIEALFRIIENK 554 (660)
T ss_pred eeHHHHHHHHHHHHhcc
Confidence 78899999999999764
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.7e-12 Score=120.26 Aligned_cols=198 Identities=17% Similarity=0.090 Sum_probs=129.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCc-ceeeecCcC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAV-DHLVNTASL 120 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~i-DvlVnnAg~ 120 (349)
.||||||+|.||.+++++|.++|++|++++|......... ..+..+.+| .+..... |.+||+|+.
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~ 74 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQ 74 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhcCCCEEEEcccc
Confidence 3999999999999999999999999999999876654322 123333333 1112233 999999998
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCch--hhHHHHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMS--LYASAKA 187 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~--~Y~asKa 187 (349)
........ .+....+++|+.|+.++++++.. .+..++|+.||.+...+. +..+ .|+.||.
T Consensus 75 ~~~~~~~~----~~~~~~~~~nv~gt~~ll~aa~~---~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~ 147 (314)
T COG0451 75 SSVPDSNA----SDPAEFLDVNVDGTLNLLEAARA---AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKL 147 (314)
T ss_pred Cchhhhhh----hCHHHHHHHHHHHHHHHHHHHHH---cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHH
Confidence 65432211 02356899999999999999976 234688996665544321 1112 4999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchh-hh-hHHHHh--h-------hcCCCCHHHHHHHHHHH
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAE-MQ-WKEERE--V-------HVAGGPVEDFARLIVSG 256 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~-~~-~~~~~~--~-------~~~~~~~edvA~~i~~l 256 (349)
+.+.+++....+. .+.+..+.|+.+-.+............. .. ...... . ....+..+|+|++++.+
T Consensus 148 ~~E~~~~~~~~~~--~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 225 (314)
T COG0451 148 AAEQLLRAYARLY--GLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLA 225 (314)
T ss_pred HHHHHHHHHHHHh--CCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHH
Confidence 9999999998722 2788888887665554333211000000 00 010110 0 11256689999999999
Q ss_pred HhcCCc
Q 039397 257 ACRGDT 262 (349)
Q Consensus 257 ~~~~~~ 262 (349)
++....
T Consensus 226 ~~~~~~ 231 (314)
T COG0451 226 LENPDG 231 (314)
T ss_pred HhCCCC
Confidence 998764
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-12 Score=123.78 Aligned_cols=200 Identities=15% Similarity=0.025 Sum_probs=128.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------cCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------ESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~g~iDvlVnnA 118 (349)
++|+|+||||+|.||.+++++|.++|++|++++|....... . ......++.+|.. ...++|++||.|
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~---~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 93 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS---E---DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA 93 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc---c---ccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence 56899999999999999999999999999999986532110 0 0011234555522 134689999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------------CCCCchh
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------------PLPRMSL 181 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------------~~~~~~~ 181 (349)
+......... .+....++.|+.++.++++++... +..++|++||...+- +......
T Consensus 94 a~~~~~~~~~----~~~~~~~~~N~~~t~nll~aa~~~---~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~ 166 (370)
T PLN02695 94 ADMGGMGFIQ----SNHSVIMYNNTMISFNMLEAARIN---GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 166 (370)
T ss_pred cccCCccccc----cCchhhHHHHHHHHHHHHHHHHHh---CCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCH
Confidence 8654322221 122456788999999999987532 235899999974321 2224568
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc--cchhhh-hHH---------HHhhhcCCCCHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE--DGAEMQ-WKE---------EREVHVAGGPVEDF 249 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~--~~~~~~-~~~---------~~~~~~~~~~~edv 249 (349)
|+.+|.+.+.+++..+...+ +.+..+.|+.+-.|-........ ...... ... .......++..+|+
T Consensus 167 Yg~sK~~~E~~~~~~~~~~g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~ 244 (370)
T PLN02695 167 YGLEKLATEELCKHYTKDFG--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDEC 244 (370)
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHH
Confidence 99999999999988776543 78888888877665321000000 000000 000 00112235678999
Q ss_pred HHHHHHHHhcC
Q 039397 250 ARLIVSGACRG 260 (349)
Q Consensus 250 A~~i~~l~~~~ 260 (349)
+++++.++..+
T Consensus 245 a~ai~~~~~~~ 255 (370)
T PLN02695 245 VEGVLRLTKSD 255 (370)
T ss_pred HHHHHHHHhcc
Confidence 99999988764
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.5e-13 Score=123.26 Aligned_cols=197 Identities=14% Similarity=0.012 Sum_probs=119.4
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEE-Eecc-----ccCCCcceeeecCcCCC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLV-SLNN-----KESKAVDHLVNTASLGH 122 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~-~~d~-----~~~g~iDvlVnnAg~~~ 122 (349)
|+||||+|.||++++++|+++|++++++.|+........ .+.. ...+.... .... ..++++|++||+||...
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~ 80 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-NLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSS 80 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH-hhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecC
Confidence 799999999999999999999997777665543221110 1000 00000000 0001 12357999999998643
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------CCCchhhHHHHHHHHH
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------LPRMSLYASAKAALVT 191 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~ 191 (349)
.. +. + -+..+++|+.++.++++++... +.++|++||.+.+.. ......|+.||.+.+.
T Consensus 81 ~~---~~-~---~~~~~~~n~~~t~~ll~~~~~~----~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 149 (308)
T PRK11150 81 TT---EW-D---GKYMMDNNYQYSKELLHYCLER----EIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDE 149 (308)
T ss_pred Cc---CC-C---hHHHHHHHHHHHHHHHHHHHHc----CCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHH
Confidence 22 11 1 2457899999999999998642 347999999754321 1124679999999999
Q ss_pred HHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchh----hhhHH---------HHhhhcCCCCHHHHHHHHHHHHh
Q 039397 192 FYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAE----MQWKE---------EREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 192 l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~----~~~~~---------~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+.+.++.+.. +.+..+.|+.+-.+....... ..... ..... ........+.++|+|++++.+++
T Consensus 150 ~~~~~~~~~~--~~~~~lR~~~vyG~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~ 226 (308)
T PRK11150 150 YVRQILPEAN--SQICGFRYFNVYGPREGHKGS-MASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWE 226 (308)
T ss_pred HHHHHHHHcC--CCEEEEeeeeecCCCCCCCCc-cchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHh
Confidence 9888865532 677888887665543211000 00000 00000 00112345788999999999988
Q ss_pred cCC
Q 039397 259 RGD 261 (349)
Q Consensus 259 ~~~ 261 (349)
.+.
T Consensus 227 ~~~ 229 (308)
T PRK11150 227 NGV 229 (308)
T ss_pred cCC
Confidence 653
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.6e-12 Score=120.72 Aligned_cols=207 Identities=13% Similarity=0.168 Sum_probs=147.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcC--CCCeEEEEEecccc---------CCCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYN--PINEVTLVSLNNKE---------SKAV 111 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d~~~---------~g~i 111 (349)
.++||+++||||+|.||.++++++++.+. ++++.+|++.++.....++.. +..+...+-+|..+ .-++
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 46899999999999999999999999985 788999999988877777733 23456666666221 2259
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
|+++|.|+.-+....+. ...+.+.+|+.|+.++++++...- -.++|.+|+--+..|. ..||+||...+.
T Consensus 327 d~VfHAAA~KHVPl~E~-----nP~Eai~tNV~GT~nv~~aa~~~~---V~~~V~iSTDKAV~Pt---NvmGaTKr~aE~ 395 (588)
T COG1086 327 DIVFHAAALKHVPLVEY-----NPEEAIKTNVLGTENVAEAAIKNG---VKKFVLISTDKAVNPT---NVMGATKRLAEK 395 (588)
T ss_pred ceEEEhhhhccCcchhc-----CHHHHHHHhhHhHHHHHHHHHHhC---CCEEEEEecCcccCCc---hHhhHHHHHHHH
Confidence 99999999866544333 347889999999999999998653 2589999998887654 679999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc----ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFML----EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++.+++.+.... -++.+|.=|-|-.....-.... ..+..... ......+-+++.+|.++.++.+....+.
T Consensus 396 ~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~~g 470 (588)
T COG1086 396 LFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIAKG 470 (588)
T ss_pred HHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhcCC
Confidence 999998877653 5777777766543321110000 00000000 0011223467779999999988876644
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-12 Score=133.02 Aligned_cols=206 Identities=13% Similarity=0.070 Sum_probs=131.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCc--chhhhHHHHhcCCCCeEEEEEeccc---------cCCCc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKR--KANLVLVARRE--NRLQGSTIDEYNPINEVTLVSLNNK---------ESKAV 111 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~--~~l~~~~~~~~~~~~~~~~~~~d~~---------~~g~i 111 (349)
.++|+||||||+|.||++++++|.++ |++|++++|.. +....... ......+.++.+|.. ...++
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP--SKSSPNFKFVKGDIASADLVNYLLITEGI 81 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh--cccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence 45689999999999999999999998 68999998753 22221111 111235667777732 12579
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC--------------CC
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP--------------LP 177 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~--------------~~ 177 (349)
|++||+|+........ ++....+++|+.|+.++++++... ....++|++||...+-. ..
T Consensus 82 D~ViHlAa~~~~~~~~-----~~~~~~~~~Nv~gt~~ll~a~~~~--~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~ 154 (668)
T PLN02260 82 DTIMHFAAQTHVDNSF-----GNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDADVGNHEASQLL 154 (668)
T ss_pred CEEEECCCccCchhhh-----hCHHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEcchHHhCCCccccccCccccCCCC
Confidence 9999999975432111 223567899999999999987543 11358999999754321 11
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCc-ccc------ccchhhhhHHHHhhhcCCCCHHHHH
Q 039397 178 RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGK-FML------EDGAEMQWKEEREVHVAGGPVEDFA 250 (349)
Q Consensus 178 ~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~edvA 250 (349)
....|+.+|.+.+.+++.+..+.+ +.+.++.|+.+-.+-.... ... ..+...............+..+|+|
T Consensus 155 p~~~Y~~sK~~aE~~v~~~~~~~~--l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva 232 (668)
T PLN02260 155 PTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVA 232 (668)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHcC--CCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHH
Confidence 245799999999999998876653 6788888877765432110 000 0000000000001112457789999
Q ss_pred HHHHHHHhcCC
Q 039397 251 RLIVSGACRGD 261 (349)
Q Consensus 251 ~~i~~l~~~~~ 261 (349)
+++..++..+.
T Consensus 233 ~a~~~~l~~~~ 243 (668)
T PLN02260 233 EAFEVVLHKGE 243 (668)
T ss_pred HHHHHHHhcCC
Confidence 99999987653
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.45 E-value=2e-12 Score=120.07 Aligned_cols=191 Identities=8% Similarity=-0.024 Sum_probs=119.0
Q ss_pred EEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cc--cCCCcceeeec
Q 039397 50 VIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NK--ESKAVDHLVNT 117 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~--~~g~iDvlVnn 117 (349)
||||||+|.||.+++++|.++|+ .|++++|..... ... ... . ..+..| .. ..+++|++||+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~---~--~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~ 73 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLA---D--LVIADYIDKEDFLDRLEKGAFGKIEAIFHQ 73 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhh---h--eeeeccCcchhHHHHHHhhccCCCCEEEEC
Confidence 68999999999999999999998 788888764321 111 110 0 011111 01 23689999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------CCCchhhHHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------LPRMSLYASAK 186 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asK 186 (349)
|+.... ..++.+..+++|+.++.++++++... +.++|++||...+.. ......|+.+|
T Consensus 74 A~~~~~-------~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK 142 (314)
T TIGR02197 74 GACSDT-------TETDGEYMMENNYQYSKRLLDWCAEK----GIPFIYASSAATYGDGEAGFREGRELERPLNVYGYSK 142 (314)
T ss_pred ccccCc-------cccchHHHHHHHHHHHHHHHHHHHHh----CCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHH
Confidence 996421 12345778999999999999988643 347999999764421 11356799999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhh-HH-----------------HHhhhcCCCCHHH
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQW-KE-----------------EREVHVAGGPVED 248 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~ed 248 (349)
.+.+.+++....+....+.+..+.|+.+-.+-...... .......+ .. ........+..+|
T Consensus 143 ~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D 221 (314)
T TIGR02197 143 FLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGK-MASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKD 221 (314)
T ss_pred HHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCC-cccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHH
Confidence 99999998643322222567777776655443210000 00000000 00 0001124677899
Q ss_pred HHHHHHHHHhc
Q 039397 249 FARLIVSGACR 259 (349)
Q Consensus 249 vA~~i~~l~~~ 259 (349)
++++++.++..
T Consensus 222 ~a~~i~~~~~~ 232 (314)
T TIGR02197 222 VVDVNLWLLEN 232 (314)
T ss_pred HHHHHHHHHhc
Confidence 99999999987
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.4e-12 Score=111.56 Aligned_cols=195 Identities=15% Similarity=0.086 Sum_probs=133.8
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc---------cCCCcceeeecCcC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK---------ESKAVDHLVNTASL 120 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~---------~~g~iDvlVnnAg~ 120 (349)
||||||+|.||.+++++|.++|+.|+...|+........... .+..+..|.. +...+|++||+|+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeeccccccccccccccCceEEEEeecc
Confidence 799999999999999999999999998888876554333221 5666666621 11268999999997
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHHHHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAKAAL 189 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaal 189 (349)
..... ..+.....++.|+.+..++++++... +..++|++||...+... .....|+.+|...
T Consensus 76 ~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~ 147 (236)
T PF01370_consen 76 SSNPE-----SFEDPEEIIEANVQGTRNLLEAAREA---GVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAA 147 (236)
T ss_dssp SSHHH-----HHHSHHHHHHHHHHHHHHHHHHHHHH---TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHH
T ss_pred ccccc-----cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccc
Confidence 54111 11345788999999999999988743 22589999996544322 1345699999999
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhH------------HHHhhhcCCCCHHHHHHHHHHHH
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWK------------EEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
+.+.+.+..+.. +++..+.|+.+-.+..... ........+. .........+..+|+|++++.++
T Consensus 148 e~~~~~~~~~~~--~~~~~~R~~~vyG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 223 (236)
T PF01370_consen 148 EELLRDYAKKYG--LRVTILRPPNVYGPGNPNN--NSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAAL 223 (236)
T ss_dssp HHHHHHHHHHHT--SEEEEEEESEEESTTSSSS--STSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHH
T ss_pred cccccccccccc--ccccccccccccccccccc--ccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHH
Confidence 999999987763 7899999988877661000 0000000000 00111233466799999999999
Q ss_pred hcCC
Q 039397 258 CRGD 261 (349)
Q Consensus 258 ~~~~ 261 (349)
+.+.
T Consensus 224 ~~~~ 227 (236)
T PF01370_consen 224 ENPK 227 (236)
T ss_dssp HHSC
T ss_pred hCCC
Confidence 9876
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.8e-13 Score=119.06 Aligned_cols=207 Identities=16% Similarity=0.141 Sum_probs=130.5
Q ss_pred EEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhc--CCCCeE----EEEEec-------cccC--CCcce
Q 039397 50 VIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEY--NPINEV----TLVSLN-------NKES--KAVDH 113 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~--~~~~~~----~~~~~d-------~~~~--g~iDv 113 (349)
||||||+|.||.+++++|++.| .++++++|++.++-++..++. .....+ ..+.+| ...+ .++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999999 589999999999988887772 122223 233455 1222 38999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFY 193 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~ 193 (349)
++|.|+.-+....+. ...+.+++|+.|+.++++++..+- -.++|++||--+..| ...|++||.-.+.++
T Consensus 81 VfHaAA~KhVpl~E~-----~p~eav~tNv~GT~nv~~aa~~~~---v~~~v~ISTDKAv~P---tnvmGatKrlaE~l~ 149 (293)
T PF02719_consen 81 VFHAAALKHVPLMED-----NPFEAVKTNVLGTQNVAEAAIEHG---VERFVFISTDKAVNP---TNVMGATKRLAEKLV 149 (293)
T ss_dssp EEE------HHHHCC-----CHHHHHHHHCHHHHHHHHHHHHTT----SEEEEEEECGCSS-----SHHHHHHHHHHHHH
T ss_pred EEEChhcCCCChHHh-----CHHHHHHHHHHHHHHHHHHHHHcC---CCEEEEccccccCCC---CcHHHHHHHHHHHHH
Confidence 999999865544333 346889999999999999998762 358999999887654 478999999999999
Q ss_pred HHHHHHhcCC-eeEEEEecCcccCCCCCCc--ccc--ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC-ceEEcC
Q 039397 194 ESLRFELNDE-VGITIATHGWIGIEMTKGK--FML--EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD-TYVKFP 267 (349)
Q Consensus 194 ~~la~el~~~-I~v~~v~PG~v~T~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~-~~i~~p 267 (349)
.+.+...+.. .++.+|.=|-|-.....-. +.. ..+..... ......+-+++++|.++.++.++..+. ..+.++
T Consensus 150 ~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~~geifvl 228 (293)
T PF02719_consen 150 QAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAKGGEIFVL 228 (293)
T ss_dssp HHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE
T ss_pred HHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCCCCcEEEe
Confidence 9998877555 7888888776642211100 000 00000000 001122356788999999999887653 345544
Q ss_pred c
Q 039397 268 S 268 (349)
Q Consensus 268 ~ 268 (349)
.
T Consensus 229 ~ 229 (293)
T PF02719_consen 229 D 229 (293)
T ss_dssp -
T ss_pred c
Confidence 3
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.9e-12 Score=118.00 Aligned_cols=185 Identities=11% Similarity=0.029 Sum_probs=116.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnAg~~ 121 (349)
+|+||||||.||++++++|.++|++|++++|+.++..... . ..+.++.+|. +...++|++||+++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~--~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----E--WGAELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----h--cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 6999999999999999999999999999999865433221 1 1356666662 2345689999987632
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhc
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~ 201 (349)
. .+.....++|+.++.++++++... +-.++|++||..+.. . +...|..+|...+.+.+. .
T Consensus 76 ~----------~~~~~~~~~~~~~~~~l~~aa~~~---gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l~~----~- 135 (317)
T CHL00194 76 P----------SDLYNAKQIDWDGKLALIEAAKAA---KIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKLKK----S- 135 (317)
T ss_pred C----------CCccchhhhhHHHHHHHHHHHHHc---CCCEEEEeccccccc-c-CCChHHHHHHHHHHHHHH----c-
Confidence 1 112345678899999888888643 225899999864321 1 235688999988776542 1
Q ss_pred CCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 202 DEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 202 ~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.+..+.+.|+.+..++..............+..........+..+|+|++++.++.++
T Consensus 136 -~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 193 (317)
T CHL00194 136 -GIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLP 193 (317)
T ss_pred -CCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCc
Confidence 2677888887543222111000000000000000111224567799999999888754
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.8e-11 Score=95.86 Aligned_cols=193 Identities=15% Similarity=0.057 Sum_probs=141.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------------cccCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------------NKESK 109 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------------~~~~g 109 (349)
+-.+|+|-||-|.+|.++++.|-+.++.|.-++..+.+... .-+.+..+ .-...
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad----------~sI~V~~~~swtEQe~~v~~~vg~sL~ge 71 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD----------SSILVDGNKSWTEQEQSVLEQVGSSLQGE 71 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc----------ceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence 34689999999999999999999999999988876544221 11111111 12335
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|.+++-||.+..+......-....+-|+.-.++....-.+.+..|++ .+|-+-..+.-++.-+.|++..|+.+|+|+
T Consensus 72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK-~GGLL~LtGAkaAl~gTPgMIGYGMAKaAV 150 (236)
T KOG4022|consen 72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK-PGGLLQLTGAKAALGGTPGMIGYGMAKAAV 150 (236)
T ss_pred ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC-CCceeeecccccccCCCCcccchhHHHHHH
Confidence 7999999998876655443222345567888888888878888888874 355555566677788999999999999999
Q ss_pred HHHHHHHHHHhcCC---eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 190 VTFYESLRFELNDE---VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 190 ~~l~~~la~el~~~---I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++++++|+.+-..- -.+..|.|=..||||.+..+...+- ..+.+.+++++..+....+.+
T Consensus 151 HqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf------------ssWTPL~fi~e~flkWtt~~~ 213 (236)
T KOG4022|consen 151 HQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF------------SSWTPLSFISEHFLKWTTETS 213 (236)
T ss_pred HHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc------------cCcccHHHHHHHHHHHhccCC
Confidence 99999999875432 5677888988999999886554332 256777888888887776543
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.38 E-value=9.8e-12 Score=114.05 Aligned_cols=185 Identities=16% Similarity=0.097 Sum_probs=117.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccccc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEE 128 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~~~ 128 (349)
+++||||+|+||.+++++|.++|++|++++|+...+.... .+.. .-+..++|++||+||......
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~-~~~~-----------~~~~~~~d~vi~~a~~~~~~~--- 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPE-ALER-----------LLRAIRPDAVVNTAAYTDVDG--- 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHH-HHHH-----------HHHhCCCCEEEECCccccccc---
Confidence 3799999999999999999999999999999633222110 0000 001125799999999753221
Q ss_pred cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------CCCchhhHHHHHHHHHHHHHHH
Q 039397 129 VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------LPRMSLYASAKAALVTFYESLR 197 (349)
Q Consensus 129 ~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la 197 (349)
..+..+..+++|+.++.++++++.. .+.++|++||...+.+ ......|+.+|.+.+.+++.+
T Consensus 66 --~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~- 138 (287)
T TIGR01214 66 --AESDPEKAFAVNALAPQNLARAAAR----HGARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA- 138 (287)
T ss_pred --cccCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-
Confidence 1123467889999999999998754 2348999998654321 113467999999999888765
Q ss_pred HHhcCCeeEEEEecCcccCCCCCCccccc----cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 198 FELNDEVGITIATHGWIGIEMTKGKFMLE----DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 198 ~el~~~I~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
. ..++.+.|+.+-.+.....+... .................+..+|+|+++..++..+
T Consensus 139 ---~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 200 (287)
T TIGR01214 139 ---G--PNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRL 200 (287)
T ss_pred ---C--CCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhc
Confidence 2 36788888877655421110000 0000000000001224566899999999999764
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.7e-11 Score=122.20 Aligned_cols=151 Identities=14% Similarity=0.053 Sum_probs=107.3
Q ss_pred EEEEeCCCchHHHHHHHHHH--HcCCeEEEEecCcch--hhhHHHHhcCCCCeEEEEEecccc------------CCCcc
Q 039397 49 VVIITGASSDIGEQIAYEYA--KRKANLVLVARRENR--LQGSTIDEYNPINEVTLVSLNNKE------------SKAVD 112 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la--~~G~~Vv~~~r~~~~--l~~~~~~~~~~~~~~~~~~~d~~~------------~g~iD 112 (349)
+||||||+|.||.+++++|+ ++|++|++++|+... +...... ....++..+..|... ..++|
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~D 79 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAY--WGADRVVPLVGDLTEPGLGLSEADIAELGDID 79 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHh--cCCCcEEEEecccCCccCCcCHHHHHHhcCCC
Confidence 69999999999999999999 589999999996533 1111111 111356667767432 15789
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-------------CCc
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-------------PRM 179 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-------------~~~ 179 (349)
++||+||..... .......++|+.|+.++++++... +..++|++||...+... ...
T Consensus 80 ~Vih~Aa~~~~~--------~~~~~~~~~nv~gt~~ll~~a~~~---~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~ 148 (657)
T PRK07201 80 HVVHLAAIYDLT--------ADEEAQRAANVDGTRNVVELAERL---QAATFHHVSSIAVAGDYEGVFREDDFDEGQGLP 148 (657)
T ss_pred EEEECceeecCC--------CCHHHHHHHHhHHHHHHHHHHHhc---CCCeEEEEeccccccCccCccccccchhhcCCC
Confidence 999999964321 223567789999999999887643 23689999997664211 123
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCC
Q 039397 180 SLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE 217 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~ 217 (349)
..|+.||...+.+.+. ...+.++.+.|+.+-.+
T Consensus 149 ~~Y~~sK~~~E~~~~~-----~~g~~~~ilRp~~v~G~ 181 (657)
T PRK07201 149 TPYHRTKFEAEKLVRE-----ECGLPWRVYRPAVVVGD 181 (657)
T ss_pred CchHHHHHHHHHHHHH-----cCCCcEEEEcCCeeeec
Confidence 5699999999988763 12378899999888654
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.37 E-value=6e-11 Score=105.88 Aligned_cols=140 Identities=14% Similarity=0.058 Sum_probs=104.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc---------cCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK---------ESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~---------~~g~iDvlVnnA 118 (349)
++||||||+|-||.+++.+|++.|++|+++|.-.....+...... ..+++.|.. +..++|.+||-|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 379999999999999999999999999999987655444333221 456666621 224899999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC------------CchhhHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP------------RMSLYASAK 186 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~------------~~~~Y~asK 186 (349)
|....+... ++-.+-++-|+.|+..++++...+-. .+|||-|| ++.++.| ...+|+.||
T Consensus 76 a~~~VgESv-----~~Pl~Yy~NNv~gTl~Ll~am~~~gv---~~~vFSSt-AavYG~p~~~PI~E~~~~~p~NPYG~sK 146 (329)
T COG1087 76 ASISVGESV-----QNPLKYYDNNVVGTLNLIEAMLQTGV---KKFIFSST-AAVYGEPTTSPISETSPLAPINPYGRSK 146 (329)
T ss_pred cccccchhh-----hCHHHHHhhchHhHHHHHHHHHHhCC---CEEEEecc-hhhcCCCCCcccCCCCCCCCCCcchhHH
Confidence 987665433 34468899999999999998876532 35666555 4444333 346899999
Q ss_pred HHHHHHHHHHHHHhc
Q 039397 187 AALVTFYESLRFELN 201 (349)
Q Consensus 187 aal~~l~~~la~el~ 201 (349)
...+.+.+.++.-..
T Consensus 147 lm~E~iL~d~~~a~~ 161 (329)
T COG1087 147 LMSEEILRDAAKANP 161 (329)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999998766
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.4e-11 Score=105.72 Aligned_cols=202 Identities=17% Similarity=0.057 Sum_probs=131.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCc--chhhhHHHHhcCCCCeEEEEEeccc---------cCCCccee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRE--NRLQGSTIDEYNPINEVTLVSLNNK---------ESKAVDHL 114 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~--~~l~~~~~~~~~~~~~~~~~~~d~~---------~~g~iDvl 114 (349)
+++|||||+|.||.+.++.+.++.- +|+.++.-. ..++.+ +++. ...+..+++.|.. ..-++|++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~-~~~~~~fv~~DI~D~~~v~~~~~~~~~D~V 78 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVE-DSPRYRFVQGDICDRELVDRLFKEYQPDAV 78 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhh-cCCCceEEeccccCHHHHHHHHHhcCCCeE
Confidence 4689999999999999999999875 467666532 112222 2222 2346778887722 11268999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-------------cCCCCchh
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-------------LPLPRMSL 181 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-------------~~~~~~~~ 181 (349)
||-|+-++...... .-+..+++|+.|++.+++++..+..+ -++++||.-.-+ .|+...++
T Consensus 79 vhfAAESHVDRSI~-----~P~~Fi~TNv~GT~~LLEaar~~~~~--frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSP 151 (340)
T COG1088 79 VHFAAESHVDRSID-----GPAPFIQTNVVGTYTLLEAARKYWGK--FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSP 151 (340)
T ss_pred EEechhcccccccc-----ChhhhhhcchHHHHHHHHHHHHhccc--ceEEEeccccccccccCCCCCcccCCCCCCCCC
Confidence 99999776554333 33678899999999999999877532 378898873322 34556789
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEEec----CcccCCCCCCcccc-----ccchhhhhHHHHhhhcCCCCHHHHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIATH----GWIGIEMTKGKFML-----EDGAEMQWKEEREVHVAGGPVEDFARL 252 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v~P----G~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~edvA~~ 252 (349)
|+|||||.+.++++...-++- .++...+ ||-.-|- ..... -.+............+.++-+||-+++
T Consensus 152 YSASKAasD~lVray~~TYgl--p~~ItrcSNNYGPyqfpE--KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~a 227 (340)
T COG1088 152 YSASKAASDLLVRAYVRTYGL--PATITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRA 227 (340)
T ss_pred cchhhhhHHHHHHHHHHHcCC--ceEEecCCCCcCCCcCch--hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHH
Confidence 999999999999999988874 4444444 3322110 00000 000000001111223456677999999
Q ss_pred HHHHHhcCCc
Q 039397 253 IVSGACRGDT 262 (349)
Q Consensus 253 i~~l~~~~~~ 262 (349)
|...+.+++.
T Consensus 228 i~~Vl~kg~~ 237 (340)
T COG1088 228 IDLVLTKGKI 237 (340)
T ss_pred HHHHHhcCcC
Confidence 9999999865
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.4e-11 Score=103.91 Aligned_cols=166 Identities=19% Similarity=0.215 Sum_probs=113.2
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeecCcCCC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNTASLGH 122 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnnAg~~~ 122 (349)
|+|+||||.+|+.++++|.++|++|+++.|++++.++ ...+..+.+| .+...+.|++|+++|...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhc
Confidence 7999999999999999999999999999999887665 3467788888 233457999999997531
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCC---------chhhHHHHHHHHHH
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPR---------MSLYASAKAALVTF 192 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~---------~~~Y~asKaal~~l 192 (349)
.+ ...++.++..+++.+ .++|++||.......+. ...|...|...+.+
T Consensus 73 ----------~~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 130 (183)
T PF13460_consen 73 ----------KD------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEA 130 (183)
T ss_dssp ----------TH------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHH
T ss_pred ----------cc------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHH
Confidence 11 223333344443333 68999999887664443 23577777766554
Q ss_pred HHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 193 YESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 193 ~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.+ + ..++.+.+.||++..+.......... ........++.+|+|++++.++.+
T Consensus 131 ~~----~--~~~~~~ivrp~~~~~~~~~~~~~~~~--------~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 131 LR----E--SGLNWTIVRPGWIYGNPSRSYRLIKE--------GGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp HH----H--STSEEEEEEESEEEBTTSSSEEEESS--------TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred HH----h--cCCCEEEEECcEeEeCCCcceeEEec--------cCCCCcCcCCHHHHHHHHHHHhCC
Confidence 42 2 13899999999887665331110000 111223677889999999998864
|
... |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.7e-11 Score=112.09 Aligned_cols=189 Identities=11% Similarity=-0.018 Sum_probs=117.3
Q ss_pred EEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-cccCCCcceeeecCcCCCCcccccc
Q 039397 51 IITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-NKESKAVDHLVNTASLGHTFFFEEV 129 (349)
Q Consensus 51 lVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~~~g~iDvlVnnAg~~~~~~~~~~ 129 (349)
|||||+|.||.++++.|.++|++|+++.+..+ .++.+.. ..+ .-...++|++||+|+.........
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~~------~Dl~~~~------~l~~~~~~~~~d~Vih~A~~~~~~~~~~- 67 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHKE------LDLTRQA------DVEAFFAKEKPTYVILAAAKVGGIHANM- 67 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecccc------CCCCCHH------HHHHHHhccCCCEEEEeeeeecccchhh-
Confidence 69999999999999999999999887654321 0110000 000 001125799999999743211111
Q ss_pred CCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC----------------CCchhhHHHHHHHHHHH
Q 039397 130 TDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL----------------PRMSLYASAKAALVTFY 193 (349)
Q Consensus 130 ~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~----------------~~~~~Y~asKaal~~l~ 193 (349)
++....+++|+.++.++++++... +-+++|++||...+.+. |....|+.||.+.+.+.
T Consensus 68 ---~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~ 141 (306)
T PLN02725 68 ---TYPADFIRENLQIQTNVIDAAYRH---GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMC 141 (306)
T ss_pred ---hCcHHHHHHHhHHHHHHHHHHHHc---CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence 122467889999999999998653 23589999997543211 11235999999999998
Q ss_pred HHHHHHhcCCeeEEEEecCcccCCCCCCcccccc--chhhhh--------------HHHHhhhcCCCCHHHHHHHHHHHH
Q 039397 194 ESLRFELNDEVGITIATHGWIGIEMTKGKFMLED--GAEMQW--------------KEEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 194 ~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~--------------~~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
+.+..+.. +++..+.|+.+-.+.......... ...... ..........+.++|++++++.++
T Consensus 142 ~~~~~~~~--~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~ 219 (306)
T PLN02725 142 QAYRIQYG--WDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLM 219 (306)
T ss_pred HHHHHHhC--CCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHH
Confidence 88876653 788999998776653210000000 000000 000111235678899999999999
Q ss_pred hcC
Q 039397 258 CRG 260 (349)
Q Consensus 258 ~~~ 260 (349)
+..
T Consensus 220 ~~~ 222 (306)
T PLN02725 220 RRY 222 (306)
T ss_pred hcc
Confidence 764
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.5e-11 Score=108.35 Aligned_cols=154 Identities=15% Similarity=0.106 Sum_probs=95.6
Q ss_pred EeCCCchHHHHHHHHHHHcCC--eEEEEecCcch---hhhHHHHhc----------CCCCeEEEEEeccccC--------
Q 039397 52 ITGASSDIGEQIAYEYAKRKA--NLVLVARRENR---LQGSTIDEY----------NPINEVTLVSLNNKES-------- 108 (349)
Q Consensus 52 VTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~---l~~~~~~~~----------~~~~~~~~~~~d~~~~-------- 108 (349)
||||||.+|.++.++|++++. +|+++.|..+. .+.+.+.+. ....+++++..|..+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999987 99999998643 222211111 1156899999994331
Q ss_pred -----CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc--cC------
Q 039397 109 -----KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW--LP------ 175 (349)
Q Consensus 109 -----g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~--~~------ 175 (349)
..+|++||||+..... ..+++..++|+.|+.++++.+... +..+++++||.... ..
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~--------~~~~~~~~~NV~gt~~ll~la~~~---~~~~~~~iSTa~v~~~~~~~~~~~ 149 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFN--------APYSELRAVNVDGTRNLLRLAAQG---KRKRFHYISTAYVAGSRPGTIEEK 149 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHTSS---S---EEEEEEGGGTTS-TTT--SS
T ss_pred hhccccccceeeecchhhhhc--------ccchhhhhhHHHHHHHHHHHHHhc---cCcceEEeccccccCCCCCccccc
Confidence 3689999999875332 234557789999999999999743 22389999993211 11
Q ss_pred ------------CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCC
Q 039397 176 ------------LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEM 218 (349)
Q Consensus 176 ------------~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~ 218 (349)
......|..||+..|.+.+..+.+.+ +.++.+.||.+-..-
T Consensus 150 ~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g--~p~~I~Rp~~i~g~~ 202 (249)
T PF07993_consen 150 VYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHG--LPVTIYRPGIIVGDS 202 (249)
T ss_dssp S-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-----EEEEEE-EEE-SS
T ss_pred ccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCC--ceEEEEecCcccccC
Confidence 01235799999999999999887644 688999999886643
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.8e-11 Score=116.95 Aligned_cols=202 Identities=14% Similarity=0.092 Sum_probs=128.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC---CeEEEEecCcchhh---hHHHHh-------------cC-----CCCeEE
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK---ANLVLVARRENRLQ---GSTIDE-------------YN-----PINEVT 99 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G---~~Vv~~~r~~~~l~---~~~~~~-------------~~-----~~~~~~ 99 (349)
-++||+|+||||||.||..++++|++.+ .+|++..|...... ....++ .. ...++.
T Consensus 8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 3578999999999999999999999875 36889888754211 111111 00 014577
Q ss_pred EEEeccc--------------cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEE
Q 039397 100 LVSLNNK--------------ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165 (349)
Q Consensus 100 ~~~~d~~--------------~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV 165 (349)
.+..|.. ....+|++||+|+.... + +..+..+++|+.|+.++++++...- +-.++|
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-------~-~~~~~~~~~Nv~gt~~ll~~a~~~~--~~k~~V 157 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-------D-ERYDVALGINTLGALNVLNFAKKCV--KVKMLL 157 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-------c-CCHHHHHHHHHHHHHHHHHHHHhcC--CCCeEE
Confidence 7777742 12468999999997532 1 3457889999999999999886431 124799
Q ss_pred EEeccccccCC---------C-----------------------------------------------------CchhhH
Q 039397 166 VNASVENWLPL---------P-----------------------------------------------------RMSLYA 183 (349)
Q Consensus 166 ~isS~~~~~~~---------~-----------------------------------------------------~~~~Y~ 183 (349)
++||...+... + ....|+
T Consensus 158 ~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~ 237 (491)
T PLN02996 158 HVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYV 237 (491)
T ss_pred EEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchH
Confidence 99887644210 0 113599
Q ss_pred HHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccc----hhhh----------hHHHHhhhcCCCCHHHH
Q 039397 184 SAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDG----AEMQ----------WKEEREVHVAGGPVEDF 249 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~----~~~~----------~~~~~~~~~~~~~~edv 249 (349)
.||+..+.+++..+ ..+.+..+.|..|-.+.......--+. .... ...........++++|+
T Consensus 238 ~TK~~aE~lv~~~~----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddv 313 (491)
T PLN02996 238 FTKAMGEMLLGNFK----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMV 313 (491)
T ss_pred hhHHHHHHHHHHhc----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHH
Confidence 99999999997653 247889999977755432211000000 0000 00001123456788999
Q ss_pred HHHHHHHHhc
Q 039397 250 ARLIVSGACR 259 (349)
Q Consensus 250 A~~i~~l~~~ 259 (349)
+++++.++..
T Consensus 314 v~a~l~a~~~ 323 (491)
T PLN02996 314 VNAMIVAMAA 323 (491)
T ss_pred HHHHHHHHHH
Confidence 9999888864
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.1e-11 Score=110.74 Aligned_cols=197 Identities=11% Similarity=0.021 Sum_probs=111.4
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCcccccc
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEV 129 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~~~~ 129 (349)
||||||+|.||.+++++|+++|++|++++|+.+......... ...... ..+.+...++|++||+||.......+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~-- 74 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAP-LAESEALEGADAVINLAGEPIADKRW-- 74 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccc-cchhhhcCCCCEEEECCCCCcccccC--
Confidence 689999999999999999999999999999887654321100 000000 12234456799999999974321111
Q ss_pred CCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----CC-----C-CchhhHHHHHHHHHHHHHHHH
Q 039397 130 TDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----PL-----P-RMSLYASAKAALVTFYESLRF 198 (349)
Q Consensus 130 ~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----~~-----~-~~~~Y~asKaal~~l~~~la~ 198 (349)
+.+..+..+++|+.++.++++++...=. ....+|+.||...+. +. + ....|+..|...+...+.
T Consensus 75 -~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~--- 149 (292)
T TIGR01777 75 -TEERKQEIRDSRIDTTRALVEAIAAAEQ-KPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQA--- 149 (292)
T ss_pred -CHHHHHHHHhcccHHHHHHHHHHHhcCC-CceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhh---
Confidence 1133467789999999999888864310 012344344432111 00 0 111233344444333332
Q ss_pred HhcCC-eeEEEEecCcccCCCCCCccccccchhhhh-----HHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 199 ELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQW-----KEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 199 el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+... +.+..+.|+.+-.+-. ........ .... ..........+..+|+|+++..++.++
T Consensus 150 -~~~~~~~~~ilR~~~v~G~~~-~~~~~~~~-~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~ 214 (292)
T TIGR01777 150 -AEDLGTRVVLLRTGIVLGPKG-GALAKMLP-PFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENA 214 (292)
T ss_pred -chhcCCceEEEeeeeEECCCc-chhHHHHH-HHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCc
Confidence 2223 8899999988865521 10000000 0000 000112235678899999999999864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.4e-10 Score=107.23 Aligned_cols=130 Identities=15% Similarity=0.038 Sum_probs=88.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFF 126 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~ 126 (349)
.+++|||||+|.||.+++++|.++|++|+...++....+.+..++. . .++|++||+||.......
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~--------------~-~~~D~ViH~Aa~~~~~~~ 73 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADID--------------A-VKPTHVFNAAGVTGRPNV 73 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHH--------------h-cCCCEEEECCcccCCCCc
Confidence 3679999999999999999999999999865544333333333332 1 157999999998643221
Q ss_pred cccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc--ccc----------------CCCCchhhHHHHHH
Q 039397 127 EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE--NWL----------------PLPRMSLYASAKAA 188 (349)
Q Consensus 127 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~--~~~----------------~~~~~~~Y~asKaa 188 (349)
.. ..++-...+++|+.|+.++++++... +-+.+++||.. +.. +.+....|+.||.+
T Consensus 74 ~~--~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~ 147 (298)
T PLN02778 74 DW--CESHKVETIRANVVGTLTLADVCRER----GLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAM 147 (298)
T ss_pred hh--hhhCHHHHHHHHHHHHHHHHHHHHHh----CCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHH
Confidence 11 01234678999999999999998653 22345555432 110 11123579999999
Q ss_pred HHHHHHHHH
Q 039397 189 LVTFYESLR 197 (349)
Q Consensus 189 l~~l~~~la 197 (349)
.+.+++..+
T Consensus 148 ~E~~~~~y~ 156 (298)
T PLN02778 148 VEELLKNYE 156 (298)
T ss_pred HHHHHHHhh
Confidence 999988764
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.5e-10 Score=119.29 Aligned_cols=165 Identities=14% Similarity=0.050 Sum_probs=106.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnAg~~ 121 (349)
+++||||+|+||++++++|+++|++|++++|+.... . ...+.++.+|. +...++|++||+|+..
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 699999999999999999999999999999975321 1 11345566662 2234689999999753
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhc
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~ 201 (349)
.. .+++|+.++.++++++... +.+++|++||.. |.+.+.+.+. .
T Consensus 73 ~~--------------~~~vNv~GT~nLLeAa~~~---gvkr~V~iSS~~--------------K~aaE~ll~~----~- 116 (854)
T PRK05865 73 GR--------------NDHINIDGTANVLKAMAET---GTGRIVFTSSGH--------------QPRVEQMLAD----C- 116 (854)
T ss_pred cc--------------hHHHHHHHHHHHHHHHHHc---CCCeEEEECCcH--------------HHHHHHHHHH----c-
Confidence 11 4578999998888776432 236899999864 8887776632 2
Q ss_pred CCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 202 DEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 202 ~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.+.+..+.|+.+-.+-.........................+.++|+|++++.++..
T Consensus 117 -gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~ 173 (854)
T PRK05865 117 -GLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLD 173 (854)
T ss_pred -CCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhC
Confidence 277888888777654211100000000000000000112467789999999999864
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.1e-09 Score=95.71 Aligned_cols=167 Identities=19% Similarity=0.252 Sum_probs=128.0
Q ss_pred CCEEEEeCC-CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----------------cc--
Q 039397 47 DKVVIITGA-SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----------------NK-- 106 (349)
Q Consensus 47 ~k~vlVTGa-s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----------------~~-- 106 (349)
.++|+|.|. +.-|++.+|..|-++|+-|+++..+.++.+....+- ..++.....| .+
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p 79 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP 79 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence 468999995 799999999999999999999999987665544332 1112222222 00
Q ss_pred ---------cCCCcceeeecCcCC-CCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc---CCCeEEEE-ecccc
Q 039397 107 ---------ESKAVDHLVNTASLG-HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE---SNGRVVVN-ASVEN 172 (349)
Q Consensus 107 ---------~~g~iDvlVnnAg~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~~g~IV~i-sS~~~ 172 (349)
+.-.+..+|...... ..+++++. +.+.|.+.++.|+..++.+++.++|+|+. ++.+||.+ -|+.+
T Consensus 80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i-~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s 158 (299)
T PF08643_consen 80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETI-SPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS 158 (299)
T ss_pred CCCCCCCCCceeEEEEEEEecCCCCCCCCcccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence 011344444433322 45677776 45899999999999999999999999987 56676666 48888
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCC
Q 039397 173 WLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIE 217 (349)
Q Consensus 173 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~ 217 (349)
....|..++-+....++.+|+++|++|++++ |.|..+.-|-++-.
T Consensus 159 sl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 159 SLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG 204 (299)
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence 8999999999999999999999999999988 99999999888755
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.5e-10 Score=103.94 Aligned_cols=128 Identities=17% Similarity=0.048 Sum_probs=86.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc--CCCcceeeecCcCCCCccc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE--SKAVDHLVNTASLGHTFFF 126 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~--~g~iDvlVnnAg~~~~~~~ 126 (349)
+||||||+|.||.+++++|.++| +|++++|...... .++.+. ....+. ..++|++||+|+.......
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~~~---~Dl~d~-------~~~~~~~~~~~~D~Vih~Aa~~~~~~~ 70 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHSTDYC---GDFSNP-------EGVAETVRKIRPDVIVNAAAHTAVDKA 70 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEecccccccc---CCCCCH-------HHHHHHHHhcCCCEEEECCccCCcchh
Confidence 69999999999999999999999 7988888642110 011000 000011 1258999999997643321
Q ss_pred cccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----C------CCCchhhHHHHHHHHHHHHH
Q 039397 127 EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----P------LPRMSLYASAKAALVTFYES 195 (349)
Q Consensus 127 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----~------~~~~~~Y~asKaal~~l~~~ 195 (349)
+ ++-+..+++|+.++.++++++... +.++|++||...+- + ......|+.||.+.+.+++.
T Consensus 71 ~-----~~~~~~~~~N~~~~~~l~~aa~~~----g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~ 141 (299)
T PRK09987 71 E-----SEPEFAQLLNATSVEAIAKAANEV----GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQE 141 (299)
T ss_pred h-----cCHHHHHHHHHHHHHHHHHHHHHc----CCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 1 223566789999999999988643 34799998864331 1 12335799999999998876
Q ss_pred H
Q 039397 196 L 196 (349)
Q Consensus 196 l 196 (349)
.
T Consensus 142 ~ 142 (299)
T PRK09987 142 H 142 (299)
T ss_pred h
Confidence 5
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.2e-09 Score=99.06 Aligned_cols=158 Identities=17% Similarity=0.138 Sum_probs=114.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchh---hhHHHHh-------cCCCCeEEEEEecccc---------
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRL---QGSTIDE-------YNPINEVTLVSLNNKE--------- 107 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l---~~~~~~~-------~~~~~~~~~~~~d~~~--------- 107 (349)
+++++|||||.+|+.+.++|..+- ++|+..-|.++.. +.+...+ ....++++.+..|.++
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 579999999999999999999865 6999998876522 2222222 2345678888888432
Q ss_pred ----CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC--------
Q 039397 108 ----SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-------- 175 (349)
Q Consensus 108 ----~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-------- 175 (349)
.+.+|.+||||+.... ...+.+....|+.|+..+++.+.-. +...+.++||++....
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~--------v~pYs~L~~~NVlGT~evlrLa~~g---k~Kp~~yVSsisv~~~~~~~~~~~ 149 (382)
T COG3320 81 WQELAENVDLIIHNAALVNH--------VFPYSELRGANVLGTAEVLRLAATG---KPKPLHYVSSISVGETEYYSNFTV 149 (382)
T ss_pred HHHHhhhcceEEecchhhcc--------cCcHHHhcCcchHhHHHHHHHHhcC---CCceeEEEeeeeeccccccCCCcc
Confidence 2459999999986532 1335678889999999999988642 1235999999875421
Q ss_pred ------------CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCC
Q 039397 176 ------------LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMT 219 (349)
Q Consensus 176 ------------~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~ 219 (349)
......|+-||.+.|.+++..... + +++.++.||.+-.+-.
T Consensus 150 ~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-G--Lpv~I~Rpg~I~gds~ 202 (382)
T COG3320 150 DFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-G--LPVTIFRPGYITGDSR 202 (382)
T ss_pred ccccccccccccCccCCCcchhHHHHHHHHHHHhhc-C--CCeEEEecCeeeccCc
Confidence 112367999999999999876532 2 7999999999965544
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.7e-10 Score=98.52 Aligned_cols=200 Identities=12% Similarity=0.020 Sum_probs=117.2
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccC-CCcceeeecCcCCCCccccc
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKES-KAVDHLVNTASLGHTFFFEE 128 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~-g~iDvlVnnAg~~~~~~~~~ 128 (349)
++||||+|-||++++.+|.+.|++|+++.|+..+.+.... ..+.......+.. ..+|++||-||.......|.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~------~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrWt 74 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH------PNVTLWEGLADALTLGIDAVINLAGEPIAERRWT 74 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC------ccccccchhhhcccCCCCEEEECCCCccccccCC
Confidence 5899999999999999999999999999999877553221 1122222222222 27999999999877666554
Q ss_pred cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhc-------
Q 039397 129 VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN------- 201 (349)
Q Consensus 129 ~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~------- 201 (349)
. +.=+.+++--+..+-.+...+... +++-++..-+|..|+++......|.-....-+.|...+++++.
T Consensus 75 ~---~~K~~i~~SRi~~T~~L~e~I~~~--~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~ 149 (297)
T COG1090 75 E---KQKEEIRQSRINTTEKLVELIAAS--ETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQ 149 (297)
T ss_pred H---HHHHHHHHHHhHHHHHHHHHHHhc--cCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhh
Confidence 2 222444444444444444433321 3345666667888888776655554444333444444444432
Q ss_pred CC-eeEEEEecCcccCCCCCCccccccchhhhh---HHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 202 DE-VGITIATHGWIGIEMTKGKFMLEDGAEMQW---KEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 202 ~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.- +||..+.-|.|-.+-.-............. .........++..||..++|.|++++.
T Consensus 150 ~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~ 212 (297)
T COG1090 150 QLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE 212 (297)
T ss_pred hcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence 11 788888888876542211100000000000 000111235778899999999999985
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.2e-09 Score=99.91 Aligned_cols=162 Identities=14% Similarity=0.057 Sum_probs=112.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlV 115 (349)
.++.+++||||+|.+|++++++|.+.| .+|.+.|.......-..+........+....+| ...+.+. .+|
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 356899999999999999999999998 899999987653222222221134567777777 2334456 778
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc------------CCCC--chh
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL------------PLPR--MSL 181 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~------------~~~~--~~~ 181 (349)
|+|+...+.-.. .+-+.++++|+.|+.+++.++...- ..++|++||..-.. |.|. ...
T Consensus 81 h~aa~~~~~~~~-----~~~~~~~~vNV~gT~nvi~~c~~~~---v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~ 152 (361)
T KOG1430|consen 81 HCAASPVPDFVE-----NDRDLAMRVNVNGTLNVIEACKELG---VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDP 152 (361)
T ss_pred EeccccCccccc-----cchhhheeecchhHHHHHHHHHHhC---CCEEEEecCceEEeCCeecccCCCCCCCccccccc
Confidence 887655443222 2357899999999999988887552 35899999876442 3332 358
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEM 218 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~ 218 (349)
|+.||+-.+.+++.... .. ....++.|-.|-.|-
T Consensus 153 Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpg 187 (361)
T KOG1430|consen 153 YGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPG 187 (361)
T ss_pred cchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCC
Confidence 99999999988877653 23 777888885554443
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.1e-10 Score=101.93 Aligned_cols=187 Identities=14% Similarity=0.047 Sum_probs=110.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccccc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEE 128 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~~~ 128 (349)
++|||||+|-||.++.+.|.++|++|+.++|+.-.+..... +. ...+ ..++|++||+||+......+.
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~-~~----------~~~~-~~~pd~Vin~aa~~~~~~ce~ 69 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEA-VA----------KLLE-AFKPDVVINCAAYTNVDACEK 69 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHH-HH----------HHHH-HH--SEEEE------HHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHH-HH----------HHHH-HhCCCeEeccceeecHHhhhh
Confidence 69999999999999999999999999999887433322110 00 0001 125799999999864332222
Q ss_pred cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHHHHHHHHHHHHH
Q 039397 129 VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAKAALVTFYESLR 197 (349)
Q Consensus 129 ~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la 197 (349)
+-+..+++|+.++..+++.+.. .+.++|++||..-+-+. .....|+.+|...|...+...
T Consensus 70 -----~p~~a~~iN~~~~~~la~~~~~----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~ 140 (286)
T PF04321_consen 70 -----NPEEAYAINVDATKNLAEACKE----RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAAC 140 (286)
T ss_dssp -----SHHHHHHHHTHHHHHHHHHHHH----CT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-
T ss_pred -----ChhhhHHHhhHHHHHHHHHHHH----cCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 3467899999999999999864 45689999997544322 124689999999998887732
Q ss_pred HHhcCCeeEEEEecCcccCCCCCCccccccch---hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 198 FELNDEVGITIATHGWIGIEMTKGKFMLEDGA---EMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 198 ~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+ ....+.++++-.+-..+....-... ..............+..+|+|+.+..++.+...
T Consensus 141 ----~--~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~ 202 (286)
T PF04321_consen 141 ----P--NALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLS 202 (286)
T ss_dssp ----S--SEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH
T ss_pred ----C--CEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhccc
Confidence 2 4455666666544111110000000 000000011123456679999999999998764
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.4e-09 Score=114.19 Aligned_cols=199 Identities=17% Similarity=0.150 Sum_probs=129.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcC----CeEEEEecCcchhhhH---HHHhc-------CCCCeEEEEEecccc-----
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRK----ANLVLVARRENRLQGS---TIDEY-------NPINEVTLVSLNNKE----- 107 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G----~~Vv~~~r~~~~l~~~---~~~~~-------~~~~~~~~~~~d~~~----- 107 (349)
.++|+||||+|.||.+++++|+++| ++|+...|+....... ..... ....++.++..|...
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5799999999999999999999988 8999999975443221 11110 011256677777321
Q ss_pred --------CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC----
Q 039397 108 --------SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP---- 175 (349)
Q Consensus 108 --------~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~---- 175 (349)
...+|++||||+.... . ..+......|+.|+.++++.+... +..+++++||.+.+.+
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~----~----~~~~~~~~~nv~gt~~ll~~a~~~---~~~~~v~vSS~~v~~~~~~~ 1119 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHW----V----YPYSKLRDANVIGTINVLNLCAEG---KAKQFSFVSSTSALDTEYYV 1119 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecC----c----cCHHHHHHhHHHHHHHHHHHHHhC---CCceEEEEeCeeecCccccc
Confidence 1468999999987531 1 224555678999999999988643 2258999999755421
Q ss_pred -------------CC-----------CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhh
Q 039397 176 -------------LP-----------RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEM 231 (349)
Q Consensus 176 -------------~~-----------~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~ 231 (349)
.+ ....|+.||.+.+.+++..+. ..+.++++.||.+-.+...+.....+- ..
T Consensus 1120 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~---~g~~~~i~Rpg~v~G~~~~g~~~~~~~-~~ 1195 (1389)
T TIGR03443 1120 NLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK---RGLRGCIVRPGYVTGDSKTGATNTDDF-LL 1195 (1389)
T ss_pred chhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh---CCCCEEEECCCccccCCCcCCCCchhH-HH
Confidence 00 124599999999999887543 138899999998866533221111100 00
Q ss_pred hhHHHH---------hhhcCCCCHHHHHHHHHHHHhcC
Q 039397 232 QWKEER---------EVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 232 ~~~~~~---------~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
...... .......+++++|++++.++...
T Consensus 1196 ~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~ 1233 (1389)
T TIGR03443 1196 RMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNP 1233 (1389)
T ss_pred HHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCC
Confidence 000000 01234677899999999998654
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.04 E-value=3e-09 Score=106.20 Aligned_cols=117 Identities=18% Similarity=0.174 Sum_probs=82.6
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---eEEEEecCcchh---hhHHHHhc-----------CC-------CCeEEE
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKA---NLVLVARRENRL---QGSTIDEY-----------NP-------INEVTL 100 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~---~Vv~~~r~~~~l---~~~~~~~~-----------~~-------~~~~~~ 100 (349)
++||+|+||||+|.||..++++|++.+. +|+++.|..... +....++. .+ ..++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 5789999999999999999999998764 689998865321 11111110 01 245777
Q ss_pred EEeccccC-------------CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEE
Q 039397 101 VSLNNKES-------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVN 167 (349)
Q Consensus 101 ~~~d~~~~-------------g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~i 167 (349)
+..|..+. ..+|++||+|+.... + +..+..+++|+.|+.++++.+...- ...++|++
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f-------~-~~~~~a~~vNV~GT~nLLelA~~~~--~lk~fV~v 266 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF-------D-ERYDVAIDINTRGPCHLMSFAKKCK--KLKLFLQV 266 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc-------c-cCHHHHHHHHHHHHHHHHHHHHHcC--CCCeEEEc
Confidence 88874332 358999999987531 1 3467889999999999999886431 12468888
Q ss_pred eccc
Q 039397 168 ASVE 171 (349)
Q Consensus 168 sS~~ 171 (349)
||..
T Consensus 267 STay 270 (605)
T PLN02503 267 STAY 270 (605)
T ss_pred cCce
Confidence 8854
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.8e-09 Score=96.20 Aligned_cols=147 Identities=18% Similarity=0.112 Sum_probs=108.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH---HHHhcCCCCeEEEEEeccc---------cCCCccee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS---TIDEYNPINEVTLVSLNNK---------ESKAVDHL 114 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~---~~~~~~~~~~~~~~~~d~~---------~~g~iDvl 114 (349)
+++||||||+|.||.+.+.+|.++|+.|+++|.=.....+. .+.+......+.++..|.. ..-++|.+
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 57999999999999999999999999999998643332221 2233333567888888821 12358999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCC-Cchhh
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLP-RMSLY 182 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~-~~~~Y 182 (349)
+|-|+....+...+ .-.+..+.|+.|+++++.....+- -..+|+.||..-+- +.. ....|
T Consensus 82 ~Hfa~~~~vgeS~~-----~p~~Y~~nNi~gtlnlLe~~~~~~---~~~~V~sssatvYG~p~~ip~te~~~t~~p~~py 153 (343)
T KOG1371|consen 82 MHFAALAAVGESME-----NPLSYYHNNIAGTLNLLEVMKAHN---VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPY 153 (343)
T ss_pred Eeehhhhccchhhh-----CchhheehhhhhHHHHHHHHHHcC---CceEEEecceeeecCcceeeccCcCCCCCCCCcc
Confidence 99998866554433 236778899999999999887653 24788887766441 112 46789
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 039397 183 ASAKAALVTFYESLRFELN 201 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~ 201 (349)
+.+|.+++...+....-+.
T Consensus 154 g~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 154 GKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred hhhhHHHHHHHHhhhcccc
Confidence 9999999999999987766
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.01 E-value=7.3e-09 Score=91.59 Aligned_cols=273 Identities=12% Similarity=0.043 Sum_probs=159.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEeccccCCCcceeeecCcCCCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNNKESKAVDHLVNTASLGHT 123 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~ 123 (349)
..+++++||||+|.||.++++.|..+|+.|+++|.-.....+....+ .....+.........-...+|.++|.|+...+
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapasp 104 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPASP 104 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCCC
Confidence 46789999999999999999999999999999987544332222111 22222333333334445678999999998877
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc----------------cCCCCchhhHHHHH
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW----------------LPLPRMSLYASAKA 187 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~----------------~~~~~~~~Y~asKa 187 (349)
..+...+ .+++.+|+.++.+.+..+... +.+++..|+..-+ .|....+.|.-.|-
T Consensus 105 ~~y~~np-----vktIktN~igtln~lglakrv----~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr 175 (350)
T KOG1429|consen 105 PHYKYNP-----VKTIKTNVIGTLNMLGLAKRV----GARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKR 175 (350)
T ss_pred cccccCc-----cceeeecchhhHHHHHHHHHh----CceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHH
Confidence 6655432 477889999999999888654 3578877776543 12334678999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccch---------hhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGA---------EMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+.+.++....++.+ |.|....+--+-.|...-........ ...........+.+.-..|+.+.++.+++
T Consensus 176 ~aE~L~~~y~k~~g--iE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~ 253 (350)
T KOG1429|consen 176 VAETLCYAYHKQEG--IEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLME 253 (350)
T ss_pred HHHHHHHHhhcccC--cEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhc
Confidence 99999888876655 45555544222222111000000000 00000111112334557999999999998
Q ss_pred cCCc-eEEcC--chHHHHHHHHHhchHHHHHHHHHhccccC-C--CccccCCCCCCcccCCCCCCC--ccC-CCCceecc
Q 039397 259 RGDT-YVKFP--SWYDVFLLYRVFAPHVLNWTFRLLISSEG-A--RRTSLIGTGRPLLEGPPARPR--LEG-TSPRQVLS 329 (349)
Q Consensus 259 ~~~~-~i~~p--~~~~~~~~~~~~~P~~~~~~~~~l~~~~~-~--~~~~~~~~~~~~~~~~~~~~~--~~~-~s~~~~~~ 329 (349)
.+.+ -+++. .-+.... +. ...+.+..... . ...+-.+.-++..|++..+.. -.| .+++|.|.
T Consensus 254 s~~~~pvNiGnp~e~Tm~e--------lA-emv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~ 324 (350)
T KOG1429|consen 254 SDYRGPVNIGNPGEFTMLE--------LA-EMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLP 324 (350)
T ss_pred CCCcCCcccCCccceeHHH--------HH-HHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhH
Confidence 8744 24432 2111111 11 12222221111 1 112233444556666665533 234 49999999
Q ss_pred Cccccccc
Q 039397 330 SPSSFFSQ 337 (349)
Q Consensus 330 ~~~~~~~~ 337 (349)
....+|++
T Consensus 325 ~t~~~fr~ 332 (350)
T KOG1429|consen 325 LTVTYFRE 332 (350)
T ss_pred HHHHHHHH
Confidence 88887753
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=8.4e-09 Score=100.94 Aligned_cols=127 Identities=19% Similarity=0.050 Sum_probs=92.8
Q ss_pred CCEEE----EeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCC
Q 039397 47 DKVVI----ITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 47 ~k~vl----VTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
|..++ |+||++|+|.++++.|...|++|+.+.+...+. +.....+++.+|..+--
T Consensus 34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-------------------~~~~~~~~~~~~~d~~~-- 92 (450)
T PRK08261 34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-------------------AAGWGDRFGALVFDATG-- 92 (450)
T ss_pred CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc-------------------ccCcCCcccEEEEECCC--
Confidence 45666 889999999999999999999999987765421 11112355655543221
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcC
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~ 202 (349)
.+..+. +.+.+.+++.+++.|. .+|+||+++|..+.. ....|+++|+|+.+++++++.|+ +
T Consensus 93 ---------~~~~~~-----l~~~~~~~~~~l~~l~-~~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~-~ 153 (450)
T PRK08261 93 ---------ITDPAD-----LKALYEFFHPVLRSLA-PCGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL-R 153 (450)
T ss_pred ---------CCCHHH-----HHHHHHHHHHHHHhcc-CCCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh-h
Confidence 111121 2345577888888885 468999999987753 34569999999999999999999 5
Q ss_pred C-eeEEEEecCc
Q 039397 203 E-VGITIATHGW 213 (349)
Q Consensus 203 ~-I~v~~v~PG~ 213 (349)
+ ++++++.|++
T Consensus 154 ~gi~v~~i~~~~ 165 (450)
T PRK08261 154 RGATAQLVYVAP 165 (450)
T ss_pred cCCEEEEEecCC
Confidence 5 9999999986
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.96 E-value=8e-09 Score=92.99 Aligned_cols=185 Identities=15% Similarity=0.065 Sum_probs=116.4
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCcccccc
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEV 129 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~~~~ 129 (349)
+||||++|-+|.++.+.|. .+++|+.++|.+-.+.....- . . .-..-++|++||+|++......+.
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v-------~----~-~i~~~~PDvVIn~AAyt~vD~aE~- 68 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAELDITDPDAV-------L----E-VIRETRPDVVINAAAYTAVDKAES- 68 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCccccccChHHH-------H----H-HHHhhCCCEEEECccccccccccC-
Confidence 9999999999999999999 789999999876222110000 0 0 001127899999999876554333
Q ss_pred CCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHHHHHHHHHHHHHH
Q 039397 130 TDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAKAALVTFYESLRF 198 (349)
Q Consensus 130 ~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~ 198 (349)
+-+..+.+|..|+.++++++.. -+..+|++||-.-+-+. .....|+.||.+-+..++...
T Consensus 69 ----~~e~A~~vNa~~~~~lA~aa~~----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~- 139 (281)
T COG1091 69 ----EPELAFAVNATGAENLARAAAE----VGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG- 139 (281)
T ss_pred ----CHHHHHHhHHHHHHHHHHHHHH----hCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC-
Confidence 2478999999999999999964 35689999985543222 235689999999999887764
Q ss_pred HhcCCeeEEEEecCcccCCCCCCccc---cccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 199 ELNDEVGITIATHGWIGIEMTKGKFM---LEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 199 el~~~I~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++ ...+...++-..-..++.. ..........-.....+.....+|+|++|..++.....
T Consensus 140 ---~~--~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~ 201 (281)
T COG1091 140 ---PR--HLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE 201 (281)
T ss_pred ---CC--EEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcccc
Confidence 33 1222222222221111100 00000000011112234577789999999999988865
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.2e-08 Score=93.51 Aligned_cols=168 Identities=13% Similarity=0.125 Sum_probs=95.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------c------cCCC-ccee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------K------ESKA-VDHL 114 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~------~~g~-iDvl 114 (349)
+++||||||.+|++++++|.++|++|.++.|+.++... ..+..+..|. + ...+ +|.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v 71 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAV 71 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcccCcCCceeEE
Confidence 38999999999999999999999999999999865431 0112222331 1 1134 8999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFY 193 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~ 193 (349)
+++++... +..+.. .+++.++ ++.+ .+||++||.....+. ..+...+.+.
T Consensus 72 ~~~~~~~~----------~~~~~~--------~~~i~aa----~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~l 122 (285)
T TIGR03649 72 YLVAPPIP----------DLAPPM--------IKFIDFA----RSKGVRRFVLLSASIIEKGG-------PAMGQVHAHL 122 (285)
T ss_pred EEeCCCCC----------ChhHHH--------HHHHHHH----HHcCCCEEEEeeccccCCCC-------chHHHHHHHH
Confidence 98876321 111111 1233333 2333 689999986543321 1233333333
Q ss_pred HHHHHHhcCCeeEEEEecCcccCCCCCCcccc--ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 194 ESLRFELNDEVGITIATHGWIGIEMTKGKFML--EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 194 ~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+. . ..+..+.+.|+++..++....... ....... .........+++++|+|+++..++.+.
T Consensus 123 ~~----~-~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~ 185 (285)
T TIGR03649 123 DS----L-GGVEYTVLRPTWFMENFSEEFHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDK 185 (285)
T ss_pred Hh----c-cCCCEEEEeccHHhhhhcccccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCC
Confidence 22 1 137889999997765442211000 0000000 011122335788899999999998864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.6e-08 Score=95.24 Aligned_cols=182 Identities=16% Similarity=0.068 Sum_probs=107.0
Q ss_pred CCCCEEEEe----CCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH-------HHhcCCCCeEEEEEeccc------c
Q 039397 45 MEDKVVIIT----GASSDIGEQIAYEYAKRKANLVLVARRENRLQGST-------IDEYNPINEVTLVSLNNK------E 107 (349)
Q Consensus 45 l~~k~vlVT----Gas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~-------~~~~~~~~~~~~~~~d~~------~ 107 (349)
...++|+|| ||+|.||.+++++|+++|++|++++|+........ .++.. ..+..+..|.. .
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~~~~ 127 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPADVKSKVA 127 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHHHHhhhc
Confidence 345789999 99999999999999999999999999876432211 11111 13556666632 1
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCC--------
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPR-------- 178 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~-------- 178 (349)
..++|++||++|. +.+ ++..+++++. +.+ .++|++||...+.....
T Consensus 128 ~~~~d~Vi~~~~~----------~~~-----------~~~~ll~aa~----~~gvkr~V~~SS~~vyg~~~~~p~~E~~~ 182 (378)
T PLN00016 128 GAGFDVVYDNNGK----------DLD-----------EVEPVADWAK----SPGLKQFLFCSSAGVYKKSDEPPHVEGDA 182 (378)
T ss_pred cCCccEEEeCCCC----------CHH-----------HHHHHHHHHH----HcCCCEEEEEccHhhcCCCCCCCCCCCCc
Confidence 2468999998752 111 2223444433 233 58999999865432111
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc------ccchhhhhHHHHhhhcCCCCHHHHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML------EDGAEMQWKEEREVHVAGGPVEDFARL 252 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~edvA~~ 252 (349)
...+. +|...+.+.+. . .+.++.+.|+.+-.+........ ..+...............+.++|+|++
T Consensus 183 ~~p~~-sK~~~E~~l~~----~--~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~a 255 (378)
T PLN00016 183 VKPKA-GHLEVEAYLQK----L--GVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASM 255 (378)
T ss_pred CCCcc-hHHHHHHHHHH----c--CCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHH
Confidence 01122 78888776542 1 27889999988876643221000 000000000000111235678999999
Q ss_pred HHHHHhcC
Q 039397 253 IVSGACRG 260 (349)
Q Consensus 253 i~~l~~~~ 260 (349)
++.++.++
T Consensus 256 i~~~l~~~ 263 (378)
T PLN00016 256 FALVVGNP 263 (378)
T ss_pred HHHHhcCc
Confidence 99999864
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.9e-08 Score=101.01 Aligned_cols=139 Identities=14% Similarity=-0.016 Sum_probs=90.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEE-EEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLV-LVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFF 125 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv-~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~ 125 (349)
.+++|||||+|.||+++++.|.++|++|. ..++ -...+.+...+. . -++|++||+|+......
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~-l~d~~~v~~~i~--------------~-~~pd~Vih~Aa~~~~~~ 443 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGR-LEDRSSLLADIR--------------N-VKPTHVFNAAGVTGRPN 443 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEeeccc-cccHHHHHHHHH--------------h-hCCCEEEECCcccCCCC
Confidence 35799999999999999999999999984 3332 111111211111 1 15799999999764322
Q ss_pred ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------C-------CCCchhhHHHHH
Q 039397 126 FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------P-------LPRMSLYASAKA 187 (349)
Q Consensus 126 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~-------~~~~~~Y~asKa 187 (349)
... ..++-+..+++|+.|+.++++++... +-+.|++||...+. + .+....|+.||.
T Consensus 444 ~~~--~~~~~~~~~~~N~~gt~~l~~a~~~~----g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~ 517 (668)
T PLN02260 444 VDW--CESHKVETIRANVVGTLTLADVCREN----GLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKA 517 (668)
T ss_pred CCh--HHhCHHHHHHHHhHHHHHHHHHHHHc----CCeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHH
Confidence 211 01234688999999999999998753 33566666543210 1 122367999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEe
Q 039397 188 ALVTFYESLRFELNDE-VGITIAT 210 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~ 210 (349)
+.+.+++.... .. +++..+.
T Consensus 518 ~~E~~~~~~~~---~~~~r~~~~~ 538 (668)
T PLN02260 518 MVEELLREYDN---VCTLRVRMPI 538 (668)
T ss_pred HHHHHHHhhhh---heEEEEEEec
Confidence 99999877631 12 5555555
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.6e-08 Score=89.41 Aligned_cols=205 Identities=15% Similarity=0.044 Sum_probs=127.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCc--chhhhHHHHhcCCCCeEEEEEecc---------ccCCCcc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR--KANLVLVARRE--NRLQGSTIDEYNPINEVTLVSLNN---------KESKAVD 112 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~--~~l~~~~~~~~~~~~~~~~~~~d~---------~~~g~iD 112 (349)
+.|.++||||.|.||...+..++.. .++.+..+.-. ..+. ..+. ........++..|. -....+|
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~-~l~~-~~n~p~ykfv~~di~~~~~~~~~~~~~~id 82 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLK-NLEP-VRNSPNYKFVEGDIADADLVLYLFETEEID 82 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccc-hhhh-hccCCCceEeeccccchHHHHhhhccCchh
Confidence 3489999999999999999999986 45555544311 0111 1112 22334567777762 2335899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc------------CCCCch
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL------------PLPRMS 180 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~------------~~~~~~ 180 (349)
.++|-|+..+...... + --..+..|+.++..+++++.-.. +-.++|++|+-.-+- ..-...
T Consensus 83 ~vihfaa~t~vd~s~~----~-~~~~~~nnil~t~~Lle~~~~sg--~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtn 155 (331)
T KOG0747|consen 83 TVIHFAAQTHVDRSFG----D-SFEFTKNNILSTHVLLEAVRVSG--NIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTN 155 (331)
T ss_pred hhhhhHhhhhhhhhcC----c-hHHHhcCCchhhhhHHHHHHhcc--CeeEEEEecccceecCccccccccccccCCCCC
Confidence 9999998765433221 1 13566789999999999887653 224799999854331 112346
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCC------ccc-cccchhhhhHHHHhhhcCCCCHHHHHHHH
Q 039397 181 LYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKG------KFM-LEDGAEMQWKEEREVHVAGGPVEDFARLI 253 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~edvA~~i 253 (349)
+|++||+|.+++.+++...++ +.+..+.-+-|-.|-.-. +.. .....+.............+-+||+++++
T Consensus 156 pyAasKaAaE~~v~Sy~~sy~--lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~ 233 (331)
T KOG0747|consen 156 PYAASKAAAEMLVRSYGRSYG--LPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAF 233 (331)
T ss_pred chHHHHHHHHHHHHHHhhccC--CcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHH
Confidence 799999999999999998887 455555554444332111 000 00000000011111223466789999999
Q ss_pred HHHHhcCC
Q 039397 254 VSGACRGD 261 (349)
Q Consensus 254 ~~l~~~~~ 261 (349)
-..+.+++
T Consensus 234 ~~v~~Kg~ 241 (331)
T KOG0747|consen 234 KAVLEKGE 241 (331)
T ss_pred HHHHhcCC
Confidence 99999987
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.4e-07 Score=93.87 Aligned_cols=168 Identities=12% Similarity=0.069 Sum_probs=103.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc------CCCcceeeecCcCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE------SKAVDHLVNTASLGH 122 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~------~g~iDvlVnnAg~~~ 122 (349)
+|+||||+|.||.+++++|.++|++|++++|+..... ...+.++.+|... ..++|++||+|+...
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~---------~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~ 72 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL---------DPRVDYVCASLRNPVLQELAGEADAVIHLAPVDT 72 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc---------cCCceEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence 5999999999999999999999999999998754311 1234556666322 346899999998631
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcC
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~ 202 (349)
+ + ..++|+.|+.++++++.. .+.++|++||..+. + ..|. . .+.+..+.
T Consensus 73 --------~-~----~~~vNv~Gt~nLleAA~~----~GvRiV~~SS~~G~---~--~~~~----~----aE~ll~~~-- 120 (699)
T PRK12320 73 --------S-A----PGGVGITGLAHVANAAAR----AGARLLFVSQAAGR---P--ELYR----Q----AETLVSTG-- 120 (699)
T ss_pred --------c-c----hhhHHHHHHHHHHHHHHH----cCCeEEEEECCCCC---C--cccc----H----HHHHHHhc--
Confidence 1 1 125799999999998853 33479999987432 1 1232 1 22222222
Q ss_pred CeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCC---CCHHHHHHHHHHHHhcCC
Q 039397 203 EVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG---GPVEDFARLIVSGACRGD 261 (349)
Q Consensus 203 ~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~edvA~~i~~l~~~~~ 261 (349)
.+.+..+.++.+-.+..... ................. +..+|++++++.+++.+.
T Consensus 121 ~~p~~ILR~~nVYGp~~~~~----~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~ 178 (699)
T PRK12320 121 WAPSLVIRIAPPVGRQLDWM----VCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR 178 (699)
T ss_pred CCCEEEEeCceecCCCCccc----HhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC
Confidence 15667777766655422110 00001000001111222 478999999999997654
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.8e-09 Score=95.65 Aligned_cols=95 Identities=13% Similarity=0.160 Sum_probs=62.0
Q ss_pred CEEEEeCC-CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeeec
Q 039397 48 KVVIITGA-SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVNT 117 (349)
Q Consensus 48 k~vlVTGa-s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVnn 117 (349)
.+=.||.. |||||+++|++|+++|++|+++++... +... ....+.....+ .+.+|++|++|||
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~~~------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn 87 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LKPE------PHPNLSIREIETTKDLLITLKELVQEHDILIHS 87 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cccc------cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 34456655 679999999999999999999986321 1110 00011111111 3556899999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHh
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 153 (349)
||+....++.+. +.++|+++ +..+.+.+.+..
T Consensus 88 Agv~d~~~~~~~-s~e~~~~~---~~~~~~~~~~~~ 119 (227)
T TIGR02114 88 MAVSDYTPVYMT-DLEQVQAS---DNLNEFLSKQNH 119 (227)
T ss_pred CEeccccchhhC-CHHHHhhh---cchhhhhccccc
Confidence 999877777765 45778866 445666666533
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.5e-08 Score=88.35 Aligned_cols=215 Identities=16% Similarity=0.055 Sum_probs=136.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH----HHHhcCCCCeEEEEEeccc---------cCCCcce
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS----TIDEYNPINEVTLVSLNNK---------ESKAVDH 113 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~----~~~~~~~~~~~~~~~~d~~---------~~g~iDv 113 (349)
+|++||||-+|--|..+|+.|+++|+.|..+.|+......- ..+-.....+...+.+|.. +.-++|-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 68999999999999999999999999999999875443322 1221223344777788732 2236799
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-----------cCCCCchhh
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-----------LPLPRMSLY 182 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-----------~~~~~~~~Y 182 (349)
+.|.|+.+..+...+.+ ..+.+++..|+.+++.+..-.- ...-++..-||+.-+ .|..+.++|
T Consensus 82 IYNLaAQS~V~vSFe~P-----~~T~~~~~iGtlrlLEaiR~~~-~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPY 155 (345)
T COG1089 82 IYNLAAQSHVGVSFEQP-----EYTADVDAIGTLRLLEAIRILG-EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPY 155 (345)
T ss_pred heeccccccccccccCc-----ceeeeechhHHHHHHHHHHHhC-CcccEEEecccHHhhcCcccCccccCCCCCCCCHH
Confidence 99999988776554432 5678899999999998875432 112355555554321 244567899
Q ss_pred HHHHHHHHHHHHHHHHHhcCC----eeEEEEecCcccCCCCCCccc----cccch-hhhhHHHHhhhcCCCCHHHHHHHH
Q 039397 183 ASAKAALVTFYESLRFELNDE----VGITIATHGWIGIEMTKGKFM----LEDGA-EMQWKEEREVHVAGGPVEDFARLI 253 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~----I~v~~v~PG~v~T~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~edvA~~i 253 (349)
+++|-...-++...+..++-+ |-+|.=+|.--.|=.++..-. ...+. ..-..........+.-..|..+++
T Consensus 156 AvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~m 235 (345)
T COG1089 156 AVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAM 235 (345)
T ss_pred HHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHH
Confidence 999999999998888777654 334433442222222211100 00000 000011223445678889999999
Q ss_pred HHHHhcCCc--eEEcC
Q 039397 254 VSGACRGDT--YVKFP 267 (349)
Q Consensus 254 ~~l~~~~~~--~i~~p 267 (349)
+..+..+++ |+...
T Consensus 236 wlmLQq~~PddyViAT 251 (345)
T COG1089 236 WLMLQQEEPDDYVIAT 251 (345)
T ss_pred HHHHccCCCCceEEec
Confidence 999998754 55443
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-06 Score=74.21 Aligned_cols=152 Identities=11% Similarity=0.062 Sum_probs=94.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCccee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDHL 114 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDvl 114 (349)
+++||||| |+|.++++.|+++|++|++++|+.++.+++...+.. ...+..+.+| .++.|++|++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 69999998 777789999999999999999998777666554432 3356667777 2345677887
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFY 193 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~ 193 (349)
|+.+-.. ++-.+.+++...=.+++ -++++|-.+.+.-+
T Consensus 80 v~~vh~~-----------------------~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~------------------ 118 (177)
T PRK08309 80 VAWIHSS-----------------------AKDALSVVCRELDGSSETYRLFHVLGSAASDP------------------ 118 (177)
T ss_pred EEecccc-----------------------chhhHHHHHHHHccCCCCceEEEEeCCcCCch------------------
Confidence 7765432 12222223322211111 26888743333111
Q ss_pred HHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 194 ESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 194 ~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+..+..+... ..-.-|..|++..+-. .++.+-||+++.++.+++.+..+.
T Consensus 119 ~~~~~~~~~~~~~~~~i~lgf~~~~~~---------------------~rwlt~~ei~~gv~~~~~~~~~~~ 169 (177)
T PRK08309 119 RIPSEKIGPARCSYRRVILGFVLEDTY---------------------SRWLTHEEISDGVIKAIESDADEH 169 (177)
T ss_pred hhhhhhhhhcCCceEEEEEeEEEeCCc---------------------cccCchHHHHHHHHHHHhcCCCeE
Confidence 1111222222 4455566788765422 278888999999999999887654
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.7e-08 Score=94.05 Aligned_cols=74 Identities=23% Similarity=0.265 Sum_probs=54.0
Q ss_pred CCCCCCEEEEeCC----------------CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--
Q 039397 43 ENMEDKVVIITGA----------------SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGa----------------s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-- 104 (349)
.+++||+++|||| ||++|.++|++|+++|++|++++++.+ ++. .. .+..+...
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~-----~~---~~~~~dv~~~ 254 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT-----PA---GVKRIDVESA 254 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC-----CC---CcEEEccCCH
Confidence 4789999999999 555999999999999999999998753 210 00 11111111
Q ss_pred -------cccCCCcceeeecCcCCCCcc
Q 039397 105 -------NKESKAVDHLVNTASLGHTFF 125 (349)
Q Consensus 105 -------~~~~g~iDvlVnnAg~~~~~~ 125 (349)
.+.++++|++|||||+....+
T Consensus 255 ~~~~~~v~~~~~~~DilI~~Aav~d~~~ 282 (399)
T PRK05579 255 QEMLDAVLAALPQADIFIMAAAVADYRP 282 (399)
T ss_pred HHHHHHHHHhcCCCCEEEEccccccccc
Confidence 345688999999999875544
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.2e-07 Score=82.46 Aligned_cols=77 Identities=18% Similarity=0.264 Sum_probs=56.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCc---chhhhHHHHhcCCCCeEEEEEeccc-------cCCCcc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKAN-LVLVARRE---NRLQGSTIDEYNPINEVTLVSLNNK-------ESKAVD 112 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~---~~l~~~~~~~~~~~~~~~~~~~d~~-------~~g~iD 112 (349)
++++|+++|||| ||+|++++..|++.|++ |++++|+. ++.+++.+++......+....+|.. .....|
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D 201 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD 201 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence 578899999999 69999999999999996 99999997 5666666665332223333334422 224579
Q ss_pred eeeecCcCC
Q 039397 113 HLVNTASLG 121 (349)
Q Consensus 113 vlVnnAg~~ 121 (349)
+||||-.++
T Consensus 202 ilINaTp~G 210 (289)
T PRK12548 202 ILVNATLVG 210 (289)
T ss_pred EEEEeCCCC
Confidence 999987554
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.2e-06 Score=77.71 Aligned_cols=91 Identities=16% Similarity=0.171 Sum_probs=62.1
Q ss_pred CEEEEeCCCch-HHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeeec
Q 039397 48 KVVIITGASSD-IGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVNT 117 (349)
Q Consensus 48 k~vlVTGas~G-IG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVnn 117 (349)
.+-.||+.|+| ||.++|++|+++|++|++++|+...... ....+..+.++ .+..+.+|++|||
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~-------~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~ 88 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE-------PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHS 88 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCC-------CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeC
Confidence 36677876665 9999999999999999999876432110 01123333322 2345679999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhh
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGN 146 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~ 146 (349)
||+....+.... +.+++.+++++|....
T Consensus 89 AAvsd~~~~~~~-~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 89 MAVSDYTPVYMT-DLEEVSASDNLNEFLT 116 (229)
T ss_pred CccCCceehhhh-hhhhhhhhhhhhhhhc
Confidence 999765554443 4678889988877654
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.34 E-value=4.3e-05 Score=74.57 Aligned_cols=208 Identities=15% Similarity=0.061 Sum_probs=129.7
Q ss_pred CCCCCCCEEEEeCCC-chHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHh----cCCCCeEEEEEeccccC-------
Q 039397 42 SENMEDKVVIITGAS-SDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDE----YNPINEVTLVSLNNKES------- 108 (349)
Q Consensus 42 ~~~l~~k~vlVTGas-~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~----~~~~~~~~~~~~d~~~~------- 108 (349)
.....+|++|||||+ +.||.+++..|+..|++|+++..+-.+ -.+....+ ...+....++..+....
T Consensus 391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlI 470 (866)
T COG4982 391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALI 470 (866)
T ss_pred CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHH
Confidence 345678999999999 679999999999999999998765432 22233333 33444455555541111
Q ss_pred ---------------------CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCe
Q 039397 109 ---------------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGR 163 (349)
Q Consensus 109 ---------------------g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~ 163 (349)
-.+|.++--|++...+...+..+ .-+-.+++-++...+++-.+.+.--.+ +-+
T Consensus 471 ewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~ags--raE~~~rilLw~V~Rliggl~~~~s~r~v~~R~h 548 (866)
T COG4982 471 EWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGS--RAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH 548 (866)
T ss_pred HHhccccccccCCcceecccccCcceeeecccCCccCccccCCc--hHHHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence 13677777777766665555422 234556666666666666555543222 134
Q ss_pred EEEEeccc-cccCCCCchhhHHHHHHHHHHHHHHHHHh--cCCeeEEEEecCccc-CCCCCCccccccchhhhhHHHHhh
Q 039397 164 VVVNASVE-NWLPLPRMSLYASAKAALVTFYESLRFEL--NDEVGITIATHGWIG-IEMTKGKFMLEDGAEMQWKEEREV 239 (349)
Q Consensus 164 IV~isS~~-~~~~~~~~~~Y~asKaal~~l~~~la~el--~~~I~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~ 239 (349)
+|.=.|.. |. +.+-.+|+-||++++.+..-+..|- +.++.+..-.-||++ |.++..+ ........+.
T Consensus 549 VVLPgSPNrG~--FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~N-------diiv~aiEk~ 619 (866)
T COG4982 549 VVLPGSPNRGM--FGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHN-------DIIVAAIEKA 619 (866)
T ss_pred EEecCCCCCCc--cCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCc-------chhHHHHHHh
Confidence 55444432 22 2355789999999999988777664 333555555568886 4444322 2222233344
Q ss_pred hcCCCCHHHHHHHHHHHHhcC
Q 039397 240 HVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 240 ~~~~~~~edvA~~i~~l~~~~ 260 (349)
..+.-+++|+|..++-+++..
T Consensus 620 GV~tyS~~EmA~~LLgL~sae 640 (866)
T COG4982 620 GVRTYSTDEMAFNLLGLASAE 640 (866)
T ss_pred CceecCHHHHHHHHHhhccHH
Confidence 556778899999999888765
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.1e-06 Score=69.71 Aligned_cols=76 Identities=18% Similarity=0.293 Sum_probs=61.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCcchhhhHHHHhcCCCCeEEEEEecc--ccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKAN-LVLVARRENRLQGSTIDEYNPINEVTLVSLNN--KESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--~~~g~iDvlVnnAg~ 120 (349)
++++|+++|.|+ ||.|++++..|.++|++ |+++.|+.++.+++...+ ....+..+..+. +.....|++||+.+.
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~--~~~~~~~~~~~~~~~~~~~~DivI~aT~~ 85 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF--GGVNIEAIPLEDLEEALQEADIVINATPS 85 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH--TGCSEEEEEGGGHCHHHHTESEEEE-SST
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc--CccccceeeHHHHHHHHhhCCeEEEecCC
Confidence 789999999998 99999999999999987 999999999999888887 333455555552 235678999999876
Q ss_pred CC
Q 039397 121 GH 122 (349)
Q Consensus 121 ~~ 122 (349)
..
T Consensus 86 ~~ 87 (135)
T PF01488_consen 86 GM 87 (135)
T ss_dssp TS
T ss_pred CC
Confidence 53
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.9e-06 Score=80.63 Aligned_cols=119 Identities=13% Similarity=0.116 Sum_probs=81.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC---CeEEEEecCcchh------hh-----HHHHh----cCCCCeEEEEEeccc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRK---ANLVLVARRENRL------QG-----STIDE----YNPINEVTLVSLNNK 106 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G---~~Vv~~~r~~~~l------~~-----~~~~~----~~~~~~~~~~~~d~~ 106 (349)
++||+++||||+|++|+.+.+.|++.- -++++.-|....- +. +-+.+ .....++..+..|..
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 579999999999999999999999753 3788887764321 11 11111 112234555556621
Q ss_pred -------------cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc
Q 039397 107 -------------ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW 173 (349)
Q Consensus 107 -------------~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~ 173 (349)
....+|++||+|+.... .|..+..+.+|.+|+.++++.+..... -...+++|+....
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrF--------de~l~~al~iNt~Gt~~~l~lak~~~~--l~~~vhVSTAy~n 159 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRF--------DEPLDVALGINTRGTRNVLQLAKEMVK--LKALVHVSTAYSN 159 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeecc--------chhhhhhhhhhhHhHHHHHHHHHHhhh--hheEEEeehhhee
Confidence 23468999999986422 255688899999999999999877642 2467888875543
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.5e-06 Score=81.29 Aligned_cols=107 Identities=20% Similarity=0.168 Sum_probs=67.1
Q ss_pred CCCCCCEEEEeCC---------------Cch-HHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--
Q 039397 43 ENMEDKVVIITGA---------------SSD-IGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGa---------------s~G-IG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-- 104 (349)
.+++||+++|||| |+| +|.++|++|.++|++|++++++..... ........+...+
T Consensus 181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~------~~~~~~~~v~~~~~~ 254 (390)
T TIGR00521 181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT------PPGVKSIKVSTAEEM 254 (390)
T ss_pred cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC------CCCcEEEEeccHHHH
Confidence 4689999999999 667 999999999999999999887654210 0000001111110
Q ss_pred -----cccCCCcceeeecCcCCCCccccccC-CcchHHHHHHhHhhhhHHHHHHhcc
Q 039397 105 -----NKESKAVDHLVNTASLGHTFFFEEVT-DTSIFPRLLDINFWGNVYPTFVALP 155 (349)
Q Consensus 105 -----~~~~g~iDvlVnnAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~lp 155 (349)
.+..+++|++|||||+....+..... ........+.+|+.-.--+++.+..
T Consensus 255 ~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~ 311 (390)
T TIGR00521 255 LEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK 311 (390)
T ss_pred HHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence 13457899999999998766543321 0111122345676666666665543
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.6e-05 Score=75.32 Aligned_cols=161 Identities=16% Similarity=0.074 Sum_probs=91.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH-HhcCC-CCeEEE---EEec-----cccCC-Ccce
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI-DEYNP-INEVTL---VSLN-----NKESK-AVDH 113 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~-~~~~~-~~~~~~---~~~d-----~~~~g-~iDv 113 (349)
.+-.+|+|+||+|++|+-+++.|.++|+.|..+.|+.++.+.... ...+. ..++.. ..+| .+... ...+
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~ 156 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVI 156 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccccee
Confidence 455789999999999999999999999999999999887766543 11111 111111 1111 11111 1334
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFY 193 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~ 193 (349)
++.++|.-... + +...-..|.+.|..++++++...-. .|+|+++|+.+....+....+.. .+...-.
T Consensus 157 v~~~~ggrp~~--e------d~~~p~~VD~~g~knlvdA~~~aGv---k~~vlv~si~~~~~~~~~~~~~~--~~~~~~~ 223 (411)
T KOG1203|consen 157 VIKGAGGRPEE--E------DIVTPEKVDYEGTKNLVDACKKAGV---KRVVLVGSIGGTKFNQPPNILLL--NGLVLKA 223 (411)
T ss_pred EEecccCCCCc--c------cCCCcceecHHHHHHHHHHHHHhCC---ceEEEEEeecCcccCCCchhhhh--hhhhhHH
Confidence 55555432211 1 1122234556688888888843322 58999999998766554443432 1111111
Q ss_pred H-HHHHHhcCC-eeEEEEecCcccCCC
Q 039397 194 E-SLRFELNDE-VGITIATHGWIGIEM 218 (349)
Q Consensus 194 ~-~la~el~~~-I~v~~v~PG~v~T~~ 218 (349)
+ ....++... +.-..|.||....+.
T Consensus 224 k~~~e~~~~~Sgl~ytiIR~g~~~~~~ 250 (411)
T KOG1203|consen 224 KLKAEKFLQDSGLPYTIIRPGGLEQDT 250 (411)
T ss_pred HHhHHHHHHhcCCCcEEEeccccccCC
Confidence 1 122222333 777888888765543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.8e-06 Score=75.48 Aligned_cols=182 Identities=12% Similarity=0.048 Sum_probs=101.9
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeecCcCCC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNTASLGH 122 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnnAg~~~ 122 (349)
|+||||+|.+|+.+++.|.+.|++|.++.|+..+.. ...+...+ +..+..| .+.+.++|.++++-+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~--~~~l~~~g--~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~ 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR--AQQLQALG--AEVVEADYDDPESLVAALKGVDAVFSVTPPSH 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH--HHHHHHTT--TEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh--hhhhhccc--ceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence 689999999999999999999999999999974322 11222222 2345666 345678999998887542
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC----CchhhHHHHHHHHHHHHHHHH
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP----RMSLYASAKAALVTFYESLRF 198 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~----~~~~Y~asKaal~~l~~~la~ 198 (349)
+ ...+ ....+++++... +-.++|. ||........ .....-..|+.++.+.+..
T Consensus 77 --------~-~~~~--------~~~~li~Aa~~a---gVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~-- 133 (233)
T PF05368_consen 77 --------P-SELE--------QQKNLIDAAKAA---GVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEEYLRES-- 133 (233)
T ss_dssp --------C-CHHH--------HHHHHHHHHHHH---T-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHC--
T ss_pred --------h-hhhh--------hhhhHHHhhhcc---ccceEEE-EEecccccccccccccchhhhhhhhhhhhhhhc--
Confidence 1 1111 122334444432 1246764 5544433211 1223335788777666554
Q ss_pred HhcCCeeEEEEecCcccCCCCCCccc---cccch-hhhhHHHHhhhcCC-CCHHHHHHHHHHHHhcCCc
Q 039397 199 ELNDEVGITIATHGWIGIEMTKGKFM---LEDGA-EMQWKEEREVHVAG-GPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 199 el~~~I~v~~v~PG~v~T~~~~~~~~---~~~~~-~~~~~~~~~~~~~~-~~~edvA~~i~~l~~~~~~ 262 (349)
.+..+.+.||+........... ..... ...+.......... .+.+|+|+.+..++.+...
T Consensus 134 ----~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~ 198 (233)
T PF05368_consen 134 ----GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEK 198 (233)
T ss_dssp ----TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGG
T ss_pred ----cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHH
Confidence 3677888888764333221111 00000 01111111111223 4789999999999988643
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.3e-05 Score=72.87 Aligned_cols=154 Identities=12% Similarity=0.002 Sum_probs=105.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCCeEEEE--Eec---cccCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLV--SLN---NKESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~--~~d---~~~~g~iDvlVnnA 118 (349)
..++|.|||++|.+|..++..|+.+|. +++++|+++ .+..+.|+.+........ ..+ .+.....|++|+.|
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitA 94 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPA 94 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence 346899999999999999999997764 899999987 333334543322222222 223 46678899999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-------------cCCCCchhhHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-------------LPLPRMSLYASA 185 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-------------~~~~~~~~Y~as 185 (349)
|.... + -+.++..+..|......+.+.+.++- ...||+++|.-.- .+.|..-.|+.+
T Consensus 95 G~~~~------~-g~~R~dll~~N~~i~~~i~~~i~~~~---p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~ 164 (323)
T PLN00106 95 GVPRK------P-GMTRDDLFNINAGIVKTLCEAVAKHC---PNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVT 164 (323)
T ss_pred CCCCC------C-CCCHHHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEe
Confidence 98533 1 14468889999998877777776552 2356666654432 245566788988
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEec
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATH 211 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~P 211 (349)
+.-...|-..++.++.-. ..|+...-
T Consensus 165 ~LDs~Rl~~~lA~~lgv~~~~V~~~Vi 191 (323)
T PLN00106 165 TLDVVRANTFVAEKKGLDPADVDVPVV 191 (323)
T ss_pred cchHHHHHHHHHHHhCCChhheEEEEE
Confidence 866777888899888755 34444433
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.4e-05 Score=69.17 Aligned_cols=80 Identities=21% Similarity=0.280 Sum_probs=58.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEe-c----cccCCCcceee
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSL-N----NKESKAVDHLV 115 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~-d----~~~~g~iDvlV 115 (349)
..++++++++|+||+|++|+.+++.|+++|++|++++|+.+++++....+.. ....+..... | .+...+.|++|
T Consensus 23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi 102 (194)
T cd01078 23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF 102 (194)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence 4478899999999999999999999999999999999998888777665531 1222222222 1 13345689998
Q ss_pred ecCcCC
Q 039397 116 NTASLG 121 (349)
Q Consensus 116 nnAg~~ 121 (349)
++....
T Consensus 103 ~at~~g 108 (194)
T cd01078 103 AAGAAG 108 (194)
T ss_pred ECCCCC
Confidence 876543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.5e-05 Score=70.73 Aligned_cols=125 Identities=18% Similarity=0.071 Sum_probs=85.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnnAg~~ 121 (349)
.++||||||.+|.+++++|.++|++|.+..|+.++..... ..+.....| .....++|.+++..+..
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 6899999999999999999999999999999988876544 345556665 23345678888877754
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHH
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLR 197 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la 197 (349)
. +.. ..............+++. ....+++.+|+..+.. .....|..+|.+.+...++..
T Consensus 75 ~-~~~----------~~~~~~~~~~~~~a~~a~----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~~sg 133 (275)
T COG0702 75 D-GSD----------AFRAVQVTAVVRAAEAAG----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAALRSSG 133 (275)
T ss_pred c-ccc----------chhHHHHHHHHHHHHHhc----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHHHhcC
Confidence 3 211 122333344455555543 1223567777666543 345789999999998887754
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=5.6e-06 Score=81.09 Aligned_cols=75 Identities=21% Similarity=0.227 Sum_probs=55.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEecc--ccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLNN--KESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d~--~~~g~iDvlVnnAg~ 120 (349)
++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++...++...+ +.++..|. +..+.+|++|+++|+
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEEFLEGVDLVVVSPGV 78 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchhHhhcCCEEEECCCC
Confidence 67899999999888 99999999999999999999985 33433333442222 33444442 335679999999997
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 5
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.06 E-value=6.6e-06 Score=84.88 Aligned_cols=154 Identities=21% Similarity=0.140 Sum_probs=116.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHH---HhcCCCCeEEEEEec-------------cccCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTI---DEYNPINEVTLVSLN-------------NKESK 109 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~---~~~~~~~~~~~~~~d-------------~~~~g 109 (349)
.|..+|+||-||.|.++|+.|..+|+ .+++++|+.-+-.-.+. .....+..+.+-..| ..+.|
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence 58899999999999999999999998 57888887644322221 123333333333333 34567
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
.+-.++|-|.+...+-+++. .+++|+++-+-.+.|+.++-+.-..+-- --.-+|.+||++.-.+..+++.|+-+..++
T Consensus 1848 ~vGGiFnLA~VLRD~LiEnQ-t~knFk~va~pK~~~Ti~LD~~sRe~C~-~LdyFv~FSSvscGRGN~GQtNYG~aNS~M 1925 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQ-TPKNFKDVAKPKYSGTINLDRVSREICP-ELDYFVVFSSVSCGRGNAGQTNYGLANSAM 1925 (2376)
T ss_pred cccchhhHHHHHHhhhhccc-ChhHHHhhhccceeeeeehhhhhhhhCc-ccceEEEEEeecccCCCCcccccchhhHHH
Confidence 88999999999888888887 4699999999999999987665443321 013689999999999999999999999999
Q ss_pred HHHHHHHHHHhcC
Q 039397 190 VTFYESLRFELND 202 (349)
Q Consensus 190 ~~l~~~la~el~~ 202 (349)
+.+++.-+.+--+
T Consensus 1926 ERiceqRr~~GfP 1938 (2376)
T KOG1202|consen 1926 ERICEQRRHEGFP 1938 (2376)
T ss_pred HHHHHHhhhcCCC
Confidence 9999987766433
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=5.6e-05 Score=70.28 Aligned_cols=144 Identities=13% Similarity=0.001 Sum_probs=95.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCCeEEEEE----ec-cccCCCcceeeec
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPINEVTLVS----LN-NKESKAVDHLVNT 117 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~----~d-~~~~g~iDvlVnn 117 (349)
++.++|.|||++|.||..++..|+.+| .+++++|++ ..+..+.|+.+......... .| .+.....|++|++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVit 83 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLIC 83 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEEC
Confidence 455799999999999999999999665 689999993 33333445433222222222 22 4677789999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc-------------ccCCCCchhhHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN-------------WLPLPRMSLYAS 184 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~-------------~~~~~~~~~Y~a 184 (349)
||.... +-+.+...+..|+...-.+++++.++ +-.++|.++|... ..+.|..-.|+.
T Consensus 84 aG~~~~-------~~~tR~dll~~N~~i~~~i~~~i~~~---~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~ 153 (321)
T PTZ00325 84 AGVPRK-------PGMTRDDLFNTNAPIVRDLVAAVASS---APKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGV 153 (321)
T ss_pred CCCCCC-------CCCCHHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeec
Confidence 997422 11346788999998887777777654 2246777777432 234566667888
Q ss_pred HHHHHHH--HHHHHHHHhcC
Q 039397 185 AKAALVT--FYESLRFELND 202 (349)
Q Consensus 185 sKaal~~--l~~~la~el~~ 202 (349)
+ .++. |-..++..+.-
T Consensus 154 g--~LDs~R~r~~la~~l~v 171 (321)
T PTZ00325 154 T--TLDVVRARKFVAEALGM 171 (321)
T ss_pred h--hHHHHHHHHHHHHHhCc
Confidence 6 2543 56666666653
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.3e-05 Score=71.44 Aligned_cols=76 Identities=20% Similarity=0.256 Sum_probs=58.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
.++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+++...+ .......+....+..|++||+.+...
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~~~~~~~~DivInatp~gm 190 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAFSMDELPLHRVDLIINATSAGM 190 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEechhhhcccCccEEEECCCCCC
Confidence 46889999999 699999999999999999999999988887777663322 23333334333457899999988754
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.7e-05 Score=77.65 Aligned_cols=80 Identities=15% Similarity=0.081 Sum_probs=53.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-ccCC-CcceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-KESK-AVDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-~~~g-~iDvlVnnAg~ 120 (349)
|+++||+++|||+++ +|.++|+.|+++|++|++.+++..........+...+..... ..+. .... .+|++|+++|+
T Consensus 1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~d~vV~s~gi 78 (447)
T PRK02472 1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVIC-GSHPLELLDEDFDLMVKNPGI 78 (447)
T ss_pred CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEe-CCCCHHHhcCcCCEEEECCCC
Confidence 357899999999986 999999999999999999998765433333333222222211 1111 1112 48999999998
Q ss_pred CCCc
Q 039397 121 GHTF 124 (349)
Q Consensus 121 ~~~~ 124 (349)
....
T Consensus 79 ~~~~ 82 (447)
T PRK02472 79 PYTN 82 (447)
T ss_pred CCCC
Confidence 6443
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.4e-05 Score=74.44 Aligned_cols=77 Identities=27% Similarity=0.372 Sum_probs=58.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHc-C-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKR-K-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~-G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
+..++++|+|+||||+|.||..++++|+++ | .++++++|+++++.+...++... ++ ...+ +.....|++|+.+
T Consensus 149 lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~--~i--~~l~-~~l~~aDiVv~~t 223 (340)
T PRK14982 149 LGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGG--KI--LSLE-EALPEADIVVWVA 223 (340)
T ss_pred hccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccc--cH--HhHH-HHHccCCEEEECC
Confidence 345799999999999999999999999865 5 59999999988888776665311 11 1222 3455789999999
Q ss_pred cCCC
Q 039397 119 SLGH 122 (349)
Q Consensus 119 g~~~ 122 (349)
+...
T Consensus 224 s~~~ 227 (340)
T PRK14982 224 SMPK 227 (340)
T ss_pred cCCc
Confidence 8753
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.88 E-value=5.4e-05 Score=69.28 Aligned_cols=76 Identities=20% Similarity=0.239 Sum_probs=57.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-cccCCCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-NKESKAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~~~g~iDvlVnnAg~~ 121 (349)
++++|+++|+|+ ||+|+++++.|++.| .+|++++|+.++.+++.+++.... .+.+ ..+ .+.....|++||+....
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~-~~~~~~~~~~~DivInaTp~g 196 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL-DLELQEELADFDLIINATSAG 196 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee-cccchhccccCCEEEECCcCC
Confidence 678899999997 999999999999999 799999999998888776653221 1222 112 23346789999987654
Q ss_pred C
Q 039397 122 H 122 (349)
Q Consensus 122 ~ 122 (349)
.
T Consensus 197 ~ 197 (278)
T PRK00258 197 M 197 (278)
T ss_pred C
Confidence 3
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0001 Score=64.04 Aligned_cols=73 Identities=19% Similarity=0.194 Sum_probs=55.0
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
...+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++.+++++..... + ...+..+......+|+++.+|.
T Consensus 22 ~~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~---g--~~~v~~~~l~~~~~Dv~vp~A~ 94 (200)
T cd01075 22 GTDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF---G--ATVVAPEEIYSVDADVFAPCAL 94 (200)
T ss_pred CCCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc---C--CEEEcchhhccccCCEEEeccc
Confidence 4678999999999995 8999999999999999999999988777665543 1 1222222111226899998875
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.1e-05 Score=66.71 Aligned_cols=77 Identities=21% Similarity=0.175 Sum_probs=51.5
Q ss_pred CCCCEEEEeCCC----------------chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe--c--
Q 039397 45 MEDKVVIITGAS----------------SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL--N-- 104 (349)
Q Consensus 45 l~~k~vlVTGas----------------~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~--d-- 104 (349)
|+||+||||+|. |.+|.++|++|.++|++|+++++....... ... .......+.. |
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s~~d~~ 76 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEGIIDLQ 76 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEecHHHHH
Confidence 579999999886 999999999999999999999864321111 000 0112233333 2
Q ss_pred ---cccC--CCcceeeecCcCCCCcc
Q 039397 105 ---NKES--KAVDHLVNTASLGHTFF 125 (349)
Q Consensus 105 ---~~~~--g~iDvlVnnAg~~~~~~ 125 (349)
.+.. .++|++||+|++....+
T Consensus 77 ~~l~~~~~~~~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 77 DKMKSIITHEKVDAVIMAAAGSDWVV 102 (229)
T ss_pred HHHHHHhcccCCCEEEECccccceec
Confidence 1122 36899999999865543
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00061 Score=55.71 Aligned_cols=112 Identities=22% Similarity=0.203 Sum_probs=80.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhc----CCCCeEEEEEeccccCCCcceeeecCcCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEY----NPINEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
+|.|+|++|.+|.++|..|...| .+++++|++++.++..+.|+. ...........+.+.....|++|..||...
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~~ 81 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVPR 81 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEeccccc
Confidence 58899999999999999999987 489999999988887776662 222345555567888889999999999753
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
.. . +.-.+.++.|..-.-.+.+...++- .++.++.+|-
T Consensus 82 ~~------g-~sR~~ll~~N~~i~~~~~~~i~~~~--p~~~vivvtN 119 (141)
T PF00056_consen 82 KP------G-MSRLDLLEANAKIVKEIAKKIAKYA--PDAIVIVVTN 119 (141)
T ss_dssp ST------T-SSHHHHHHHHHHHHHHHHHHHHHHS--TTSEEEE-SS
T ss_pred cc------c-ccHHHHHHHhHhHHHHHHHHHHHhC--CccEEEEeCC
Confidence 21 1 2235677778776666666555442 3466666653
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.79 E-value=6e-05 Score=75.05 Aligned_cols=74 Identities=22% Similarity=0.311 Sum_probs=54.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-cc--cCCCcceeeecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-NK--ESKAVDHLVNTAS 119 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~--~~g~iDvlVnnAg 119 (349)
.++++|+++|+|+ ||+|++++..|+++|++|++++|+.++.+++...+.. .. +..+ .. .....|++||+..
T Consensus 375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~---~~--~~~~~~~~~~~~~~diiINtT~ 448 (529)
T PLN02520 375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGG---QA--LTLADLENFHPEEGMILANTTS 448 (529)
T ss_pred cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC---ce--eeHhHhhhhccccCeEEEeccc
Confidence 3578999999999 6999999999999999999999998888777665421 11 1111 11 1124588998876
Q ss_pred CCC
Q 039397 120 LGH 122 (349)
Q Consensus 120 ~~~ 122 (349)
+..
T Consensus 449 vGm 451 (529)
T PLN02520 449 VGM 451 (529)
T ss_pred CCC
Confidence 654
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00057 Score=57.31 Aligned_cols=181 Identities=17% Similarity=0.155 Sum_probs=107.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnnAg~~ 121 (349)
++.|.||||-+|..|+++..++|++|..+.|+.+++.+.. .+...+.| .+...+.|++|..-|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~--------~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ--------GVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc--------cceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 5788999999999999999999999999999998876531 23333444 24455789999987765
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc-CCCeEEEEeccccccC--------CCCc--hhhHHHHHHHH
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-SNGRVVVNASVENWLP--------LPRM--SLYASAKAALV 190 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~~g~IV~isS~~~~~~--------~~~~--~~Y~asKaal~ 190 (349)
.++. + ...... .+.++..+++ ...|++.++...+..- .|.. ..|..+++. .
T Consensus 74 ~~~~-------~--~~~~k~--------~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~-a 135 (211)
T COG2910 74 ASDN-------D--ELHSKS--------IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQ-A 135 (211)
T ss_pred CCCh-------h--HHHHHH--------HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHH-H
Confidence 3211 1 111111 3333334433 2367888877666532 2222 224444444 3
Q ss_pred HHHHHHHHHhcCCeeEEEEecCcccCCCCCCc-cccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 191 TFYESLRFELNDEVGITIATHGWIGIEMTKGK-FMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 191 ~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
-+.+.|+.|-. +.-+-++|...-.|--+.. +..... .. .........++.+|-|-+++.-+++++
T Consensus 136 e~L~~Lr~~~~--l~WTfvSPaa~f~PGerTg~yrlggD-~l---l~n~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 136 EFLDSLRAEKS--LDWTFVSPAAFFEPGERTGNYRLGGD-QL---LVNAKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred HHHHHHhhccC--cceEEeCcHHhcCCccccCceEeccc-eE---EEcCCCceeeeHHHHHHHHHHHHhccc
Confidence 45566765533 7888888865544422211 110000 00 001112356788999999999998864
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0002 Score=66.98 Aligned_cols=112 Identities=20% Similarity=0.144 Sum_probs=71.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC-------CeEEEEecCcc--hhhhHHHHhcCC----CCeEEEEEec-cccCCCccee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK-------ANLVLVARREN--RLQGSTIDEYNP----INEVTLVSLN-NKESKAVDHL 114 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G-------~~Vv~~~r~~~--~l~~~~~~~~~~----~~~~~~~~~d-~~~~g~iDvl 114 (349)
+|+||||+|.+|.+++..|+..| .+|+++++++. .++....++.+. ..++. ...+ .+.....|++
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~-~~~~~~~~l~~aDiV 82 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVV-ATTDPEEAFKDVDVA 82 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCce-ecCCHHHHhCCCCEE
Confidence 58999999999999999999854 58999999653 244433333211 11222 2344 4667789999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
|+.||..... . ++-.+.++.|+.-.-.+.+.+.++- ..++.+|++|.
T Consensus 83 I~tAG~~~~~------~-~~R~~l~~~N~~i~~~i~~~i~~~~-~~~~iiivvsN 129 (325)
T cd01336 83 ILVGAMPRKE------G-MERKDLLKANVKIFKEQGEALDKYA-KKNVKVLVVGN 129 (325)
T ss_pred EEeCCcCCCC------C-CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEecC
Confidence 9999985331 1 2225677888775555555554432 12456666664
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00095 Score=62.30 Aligned_cols=148 Identities=16% Similarity=0.052 Sum_probs=102.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCcch--hhhHHHHhcCCC----CeEEEEEeccccCCCccee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-------NLVLVARRENR--LQGSTIDEYNPI----NEVTLVSLNNKESKAVDHL 114 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~~~--l~~~~~~~~~~~----~~~~~~~~d~~~~g~iDvl 114 (349)
++|.|+|++|.+|..+|..|+.+|. ++++.|.+++. ++..+.|+.+.. ..+.....|.+....-|++
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDiv 82 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADWA 82 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCEE
Confidence 5799999999999999999999885 79999996543 666666663322 2334444556778889999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc--------cc-CCCCchhhHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN--------WL-PLPRMSLYASA 185 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~--------~~-~~~~~~~Y~as 185 (349)
|..||..... . ++-.+.++.|..-.-.+.+.+.++-. ..+.+|++|-..- .. +.|....|+.+
T Consensus 83 vitaG~~~k~------g-~tR~dll~~N~~i~~~i~~~i~~~~~-~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t 154 (322)
T cd01338 83 LLVGAKPRGP------G-MERADLLKANGKIFTAQGKALNDVAS-RDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMT 154 (322)
T ss_pred EEeCCCCCCC------C-CcHHHHHHHHHHHHHHHHHHHHhhCC-CCeEEEEecCcHHHHHHHHHHHcCCCChHheEEeh
Confidence 9999985321 1 22345677777665555555544421 2456666653221 12 26777789999
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 039397 186 KAALVTFYESLRFELNDE 203 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~ 203 (349)
+..-..|...++..++-.
T Consensus 155 ~LDs~Rl~~~la~~lgv~ 172 (322)
T cd01338 155 RLDHNRAKSQLAKKAGVP 172 (322)
T ss_pred HHHHHHHHHHHHHHhCcC
Confidence 999999999999998765
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00058 Score=63.59 Aligned_cols=116 Identities=16% Similarity=0.198 Sum_probs=81.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCC---CeEEEEEeccccCCCcceeeecC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPI---NEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
+-.+++|.|+|+ |++|..+|..|+.+|. ++++.|++++.++..+.|+.+.. ..+.....|.+.....|++|..|
T Consensus 3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIita 81 (315)
T PRK00066 3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITA 81 (315)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEec
Confidence 345679999998 9999999999999996 89999999998888887774321 23444455667788899999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
|..... . ++-...++.|..-.....+.+..+- ..+.++++|-
T Consensus 82 g~~~k~------g-~~R~dll~~N~~i~~~i~~~i~~~~--~~~~vivvsN 123 (315)
T PRK00066 82 GAPQKP------G-ETRLDLVEKNLKIFKSIVGEVMASG--FDGIFLVASN 123 (315)
T ss_pred CCCCCC------C-CCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEccC
Confidence 985321 1 1224667777766555555444331 2467777763
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00043 Score=64.30 Aligned_cols=112 Identities=21% Similarity=0.222 Sum_probs=76.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCC----CCeEEEEEeccccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNP----INEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
++|.|.|+ |++|..+|..|+.+| .+|++++|++++.+....++.+. .........+.+.....|++|+.+|..
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~ 79 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP 79 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence 36788896 999999999999999 58999999999888777766221 222333345556677899999999975
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... . ++-...++.|..-.....+.+.++ ...+.++++|-
T Consensus 80 ~~~------g-~~R~dll~~N~~i~~~~~~~i~~~--~~~~~vivvsN 118 (306)
T cd05291 80 QKP------G-ETRLDLLEKNAKIMKSIVPKIKAS--GFDGIFLVASN 118 (306)
T ss_pred CCC------C-CCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEecC
Confidence 321 1 122466677776655555555443 23467777764
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00019 Score=59.41 Aligned_cols=76 Identities=22% Similarity=0.302 Sum_probs=55.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-cCCCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-ESKAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~iDvlVnnAg~~ 121 (349)
++++++++|+|+ |++|.++++.|.+.| .+|++++|+.++.++..+++.... ......|.. .....|++|++....
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dvvi~~~~~~ 92 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--IAIAYLDLEELLAEADLIINTTPVG 92 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--cceeecchhhccccCCEEEeCcCCC
Confidence 467899999998 899999999999996 899999999888777666553211 111122322 257899999998765
Q ss_pred C
Q 039397 122 H 122 (349)
Q Consensus 122 ~ 122 (349)
.
T Consensus 93 ~ 93 (155)
T cd01065 93 M 93 (155)
T ss_pred C
Confidence 3
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00069 Score=62.41 Aligned_cols=126 Identities=15% Similarity=0.145 Sum_probs=77.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
+|++++|+|+++++|.++++.+...|++|+++++++++.+... ++ +. +..+...+ ....+++|++++
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 219 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA--GA-DAVFNYRAEDLADRILAATAGQGVDVIIE 219 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc--CC-CEEEeCCCcCHHHHHHHHcCCCceEEEEE
Confidence 5799999999999999999999999999999999887665542 22 11 11111111 112246999999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc------------ccCCCCchhhHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN------------WLPLPRMSLYAS 184 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~------------~~~~~~~~~Y~a 184 (349)
++|.. ..+..+ .. .+..|+++++++... ....++...|..
T Consensus 220 ~~~~~------------~~~~~~---------------~~-l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (325)
T cd08253 220 VLANV------------NLAKDL---------------DV-LAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTA 271 (325)
T ss_pred CCchH------------HHHHHH---------------Hh-hCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhc
Confidence 88731 111111 11 235688988876321 111122335667
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 039397 185 AKAALVTFYESLRFELNDE 203 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~ 203 (349)
+|.....+.+.+...+...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~ 290 (325)
T cd08253 272 TPEERAAAAEAIAAGLADG 290 (325)
T ss_pred CHHHHHHHHHHHHHHHHCC
Confidence 7777777777766555443
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00052 Score=64.07 Aligned_cols=112 Identities=19% Similarity=0.121 Sum_probs=73.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCc--chhhhHHHHhcCC----CCeEEEEEeccccCCCcceee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-------NLVLVARRE--NRLQGSTIDEYNP----INEVTLVSLNNKESKAVDHLV 115 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~--~~l~~~~~~~~~~----~~~~~~~~~d~~~~g~iDvlV 115 (349)
+|.||||+|.+|..++..|+..|. ++++.|+++ +.++..+.|+.+. .........+.+.....|++|
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 589999999999999999998763 599999988 6666555555322 112233344567778899999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
+.||..... . +.-.+.++.|..-.-.+.+.+.++- ...+.+|++|
T Consensus 82 itAG~~~~~------g-~tR~dll~~N~~i~~~i~~~i~~~~-~~~~iiivvs 126 (323)
T cd00704 82 LVGAFPRKP------G-MERADLLRKNAKIFKEQGEALNKVA-KPTVKVLVVG 126 (323)
T ss_pred EeCCCCCCc------C-CcHHHHHHHhHHHHHHHHHHHHHhC-CCCeEEEEeC
Confidence 999975321 1 2335677777765555555444331 0235566654
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00037 Score=63.96 Aligned_cols=76 Identities=14% Similarity=0.116 Sum_probs=56.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeec--C
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNT--A 118 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnn--A 118 (349)
+.++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++............+ .+.....|++||+ +
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~ 202 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPT 202 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcC
Confidence 467899999997 8899999999999997 89999999999888887763222222222222 2234568999998 4
Q ss_pred cC
Q 039397 119 SL 120 (349)
Q Consensus 119 g~ 120 (349)
|.
T Consensus 203 Gm 204 (284)
T PRK12549 203 GM 204 (284)
T ss_pred CC
Confidence 54
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0012 Score=61.46 Aligned_cols=111 Identities=14% Similarity=0.051 Sum_probs=70.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHH---cCCeEEEEecCcchhhhHHHHhcCCCCeEEEE---Eec-cccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAK---RKANLVLVARRENRLQGSTIDEYNPINEVTLV---SLN-NKESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~---~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~---~~d-~~~~g~iDvlVnnAg~ 120 (349)
++++|.||+|++|.+++..+.. .++.+++.+|++. .+..+.++.+........ ..| .+.....|++|.++|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCC
Confidence 4689999999999999998855 3568899998753 333333553322111222 123 3556679999999998
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
.... . +.-...+..|....-.+++...++ +..++|.+.|
T Consensus 80 ~~~~------~-~~R~dll~~N~~i~~~ii~~i~~~---~~~~ivivvs 118 (312)
T PRK05086 80 ARKP------G-MDRSDLFNVNAGIVKNLVEKVAKT---CPKACIGIIT 118 (312)
T ss_pred CCCC------C-CCHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEcc
Confidence 5332 1 223567888887777776666554 2235555555
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00025 Score=67.14 Aligned_cols=70 Identities=14% Similarity=0.226 Sum_probs=55.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCC-------CcceeeecCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESK-------AVDHLVNTAS 119 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g-------~iDvlVnnAg 119 (349)
+.++|.|| |+||+.+|+.|++.| .+|++.+|+.+++++...... .++...++|..... ..|++||++.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence 57899999 999999999999999 899999999998887665532 25667777743332 3399999987
Q ss_pred CC
Q 039397 120 LG 121 (349)
Q Consensus 120 ~~ 121 (349)
..
T Consensus 78 ~~ 79 (389)
T COG1748 78 PF 79 (389)
T ss_pred ch
Confidence 54
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00083 Score=61.20 Aligned_cols=81 Identities=22% Similarity=0.240 Sum_probs=58.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCC-CcceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESK-AVDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g-~iDvlVnnAg~ 120 (349)
.+.+|+.++|.|| ||.+++++.+|++.|+ +++++.|+.++.+++++.+......+.....+..... ..|++||+-..
T Consensus 122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~ 200 (283)
T COG0169 122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATPV 200 (283)
T ss_pred cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCCC
Confidence 4567899999997 8999999999999995 8999999999999888777443322222222211212 58999998765
Q ss_pred CCCc
Q 039397 121 GHTF 124 (349)
Q Consensus 121 ~~~~ 124 (349)
...+
T Consensus 201 Gm~~ 204 (283)
T COG0169 201 GMAG 204 (283)
T ss_pred CCCC
Confidence 4433
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00021 Score=62.43 Aligned_cols=215 Identities=14% Similarity=0.059 Sum_probs=119.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh------cCCCCeEEEEEeccc---------cCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE------YNPINEVTLVSLNNK---------ESKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~------~~~~~~~~~~~~d~~---------~~g~i 111 (349)
.|++||||-+|-=|..+|+-|+++|++|..+-|+.........+- ...+......-.|.. ..-++
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 479999999999999999999999999999988876655433221 122233444444421 12246
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc--c---------ccCCCCch
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE--N---------WLPLPRMS 180 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~--~---------~~~~~~~~ 180 (349)
+-+.|.|+.++..-..+.+ +..-++...|++.++.+.-..-...+-+.---|++. | ..|.-..+
T Consensus 108 tEiYnLaAQSHVkvSFdlp-----eYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRS 182 (376)
T KOG1372|consen 108 TEVYNLAAQSHVKVSFDLP-----EYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRS 182 (376)
T ss_pred hhhhhhhhhcceEEEeecc-----cceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCC
Confidence 7778888877766544443 345567778888888887655322222332223321 1 12344568
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC----eeEEEEecC----cccCCCCCCccccccch-hhhhHHHHhhhcCCCCHHHHHH
Q 039397 181 LYASAKAALVTFYESLRFELNDE----VGITIATHG----WIGIEMTKGKFMLEDGA-EMQWKEEREVHVAGGPVEDFAR 251 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~----I~v~~v~PG----~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~edvA~ 251 (349)
+|+++|..-.-++-..+..+.-. |-+|.=+|- +|--.+++......-+. +............+....|-.+
T Consensus 183 PYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVE 262 (376)
T KOG1372|consen 183 PYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVE 262 (376)
T ss_pred hhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHH
Confidence 89999976544443333333221 333333341 11111111100000000 0000012233456788899999
Q ss_pred HHHHHHhcCCc--eEEc
Q 039397 252 LIVSGACRGDT--YVKF 266 (349)
Q Consensus 252 ~i~~l~~~~~~--~i~~ 266 (349)
+++..+.++++ ++..
T Consensus 263 AMW~mLQ~d~PdDfViA 279 (376)
T KOG1372|consen 263 AMWLMLQQDSPDDFVIA 279 (376)
T ss_pred HHHHHHhcCCCCceEEe
Confidence 99999988754 4443
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00071 Score=63.20 Aligned_cols=112 Identities=17% Similarity=0.090 Sum_probs=73.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCcch--hhhHHHHhcCCC----CeEEEEEeccccCCCcceee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-------NLVLVARRENR--LQGSTIDEYNPI----NEVTLVSLNNKESKAVDHLV 115 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~~~--l~~~~~~~~~~~----~~~~~~~~d~~~~g~iDvlV 115 (349)
+|.|+||+|.+|..++..|+..|. +++++|++++. ++..+.|+.+.. ..+.....+.+.....|++|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 478999999999999999998664 59999996553 555555553322 11111112367778899999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
+.||.... +-+++.+.++.|+.-.-.+.+...++- ...+.||++|
T Consensus 81 itAG~~~~-------~~~tr~~ll~~N~~i~k~i~~~i~~~~-~~~~iiivvs 125 (324)
T TIGR01758 81 LVGAFPRK-------EGMERRDLLSKNVKIFKEQGRALDKLA-KKDCKVLVVG 125 (324)
T ss_pred EcCCCCCC-------CCCcHHHHHHHHHHHHHHHHHHHHhhC-CCCeEEEEeC
Confidence 99998532 113467788888876666665555431 1235666655
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00035 Score=60.41 Aligned_cols=191 Identities=17% Similarity=0.068 Sum_probs=103.9
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC---eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA---NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTF 124 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~---~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~ 124 (349)
|+++|||++|=+|.+|.+.+.++|. +.+..+..+..+...++.-.- =+..++-.+||.|+... +
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~l------------F~~ekPthVIhlAAmVG-G 68 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRAL------------FESEKPTHVIHLAAMVG-G 68 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHHH------------HhccCCceeeehHhhhc-c
Confidence 6899999999999999999999986 566666555444433221100 01124567777775432 1
Q ss_pred cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc----------------cCCCCchhhHHHHHH
Q 039397 125 FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW----------------LPLPRMSLYASAKAA 188 (349)
Q Consensus 125 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~----------------~~~~~~~~Y~asKaa 188 (349)
-+.+.+- -.+.+..|+.-.-++++.+..+-. .+++...|..-+ -+.|..-.|+-+|.-
T Consensus 69 lf~N~~y---nldF~r~Nl~indNVlhsa~e~gv---~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~ 142 (315)
T KOG1431|consen 69 LFHNNTY---NLDFIRKNLQINDNVLHSAHEHGV---KKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRM 142 (315)
T ss_pred hhhcCCC---chHHHhhcceechhHHHHHHHhch---hhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHH
Confidence 1222111 123445555555555665554422 235555443321 123445679999987
Q ss_pred HHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccch------------------hhhhHHHHhhhcCCCCHHHHH
Q 039397 189 LVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGA------------------EMQWKEEREVHVAGGPVEDFA 250 (349)
Q Consensus 189 l~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~edvA 250 (349)
+.-..++.+.+.+.. .+++.|--+-.|-- .+..+.+. .........+.+..+-.+|.|
T Consensus 143 idv~n~aY~~qhg~~--~tsviPtNvfGphD--Nfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA 218 (315)
T KOG1431|consen 143 IDVQNQAYRQQHGRD--YTSVIPTNVFGPHD--NFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLA 218 (315)
T ss_pred HHHHHHHHHHHhCCc--eeeeccccccCCCC--CCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHH
Confidence 777779999988764 34444422222210 01111110 000011122334455569999
Q ss_pred HHHHHHHhcCC
Q 039397 251 RLIVSGACRGD 261 (349)
Q Consensus 251 ~~i~~l~~~~~ 261 (349)
++.++++.+-+
T Consensus 219 ~l~i~vlr~Y~ 229 (315)
T KOG1431|consen 219 DLFIWVLREYE 229 (315)
T ss_pred HHHHHHHHhhc
Confidence 99999998653
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00067 Score=66.79 Aligned_cols=72 Identities=18% Similarity=0.221 Sum_probs=53.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEE-eccccCCCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVS-LNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~-~d~~~~g~iDvlVnnAg~~ 121 (349)
++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++....... .... .+.......|++||+....
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~-----~~~~~~~~~~l~~~DiVInatP~g 401 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQG-----KAFPLESLPELHRIDIIINCLPPS 401 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----ceechhHhcccCCCCEEEEcCCCC
Confidence 577899999996 7999999999999999999999998877766554321 1111 1122345789999997543
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0019 Score=59.33 Aligned_cols=69 Identities=22% Similarity=0.241 Sum_probs=50.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTA 118 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnA 118 (349)
.++.||+++|.|. |++|+++|+.|...|++|++.+|+.++.+.... . + ...+..+ .+.....|++||+.
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~---g--~~~~~~~~l~~~l~~aDiVint~ 217 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE-M---G--LIPFPLNKLEEKVAEIDIVINTI 217 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-C---C--CeeecHHHHHHHhccCCEEEECC
Confidence 3788999999999 779999999999999999999999876543321 1 1 1122211 23345789999976
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0023 Score=59.47 Aligned_cols=70 Identities=17% Similarity=0.210 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
.+++++|+|+++++|.++++.+...|++|+++++++++.+.+. +.. . ....-..+ ....+++|++++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 241 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELG--A-DYVIDYRKEDFVREVRELTGKRGVDVVVE 241 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC--C-CeEEecCChHHHHHHHHHhCCCCCcEEEE
Confidence 5789999999999999999999999999999999887765442 221 1 11111111 111246999999
Q ss_pred cCc
Q 039397 117 TAS 119 (349)
Q Consensus 117 nAg 119 (349)
++|
T Consensus 242 ~~g 244 (342)
T cd08266 242 HVG 244 (342)
T ss_pred CCc
Confidence 988
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0011 Score=60.69 Aligned_cols=76 Identities=16% Similarity=0.132 Sum_probs=55.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEe--c-cccCCCcceeeecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSL--N-NKESKAVDHLVNTAS 119 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~--d-~~~~g~iDvlVnnAg 119 (349)
++++|+++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++++++.... .+..+.. + .......|++||+..
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~~~~~~~~~~~~~~~~DiVInaTp 199 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VITRLEGDSGGLAIEKAAEVLVSTVP 199 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cceeccchhhhhhcccCCCEEEECCC
Confidence 467899999987 9999999999999996 79999999998888777653221 1221211 1 122356899999876
Q ss_pred CC
Q 039397 120 LG 121 (349)
Q Consensus 120 ~~ 121 (349)
..
T Consensus 200 ~g 201 (282)
T TIGR01809 200 AD 201 (282)
T ss_pred CC
Confidence 64
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0011 Score=60.61 Aligned_cols=77 Identities=23% Similarity=0.297 Sum_probs=54.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCe--EEEEEe-c-cccCCCcceeeecC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINE--VTLVSL-N-NKESKAVDHLVNTA 118 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~--~~~~~~-d-~~~~g~iDvlVnnA 118 (349)
+.++|+++|-|| ||-|++++..|++.|+ +|++++|+.++.+++.+.+...... +..... + .+.....|++||+-
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT 202 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence 466899999998 9999999999999996 7999999999888887765321111 111111 1 11234689999986
Q ss_pred cCC
Q 039397 119 SLG 121 (349)
Q Consensus 119 g~~ 121 (349)
-+.
T Consensus 203 p~G 205 (283)
T PRK14027 203 PMG 205 (283)
T ss_pred CCC
Confidence 543
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.005 Score=57.47 Aligned_cols=112 Identities=18% Similarity=0.088 Sum_probs=77.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCc--chhhhHHHHhcCCC----CeEEEEEeccccCCCcceee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-------NLVLVARRE--NRLQGSTIDEYNPI----NEVTLVSLNNKESKAVDHLV 115 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~--~~l~~~~~~~~~~~----~~~~~~~~d~~~~g~iDvlV 115 (349)
+|.|+||+|.+|..+|..|+..|. ++++.|+++ ++++..+.|+.+.. ........|.+.....|++|
T Consensus 5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDvVV 84 (323)
T TIGR01759 5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVDAAL 84 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCCEEE
Confidence 689999999999999999999884 799999965 44676666663322 12333345567778899999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
..||..... . ++-.+.++.|..-.-.+.+.+.++-. .++.++++|
T Consensus 85 itAG~~~k~------g-~tR~dll~~Na~i~~~i~~~i~~~~~-~~~iiivvs 129 (323)
T TIGR01759 85 LVGAFPRKP------G-MERADLLSKNGKIFKEQGKALNKVAK-KDVKVLVVG 129 (323)
T ss_pred EeCCCCCCC------C-CcHHHHHHHHHHHHHHHHHHHHhhCC-CCeEEEEeC
Confidence 999975321 1 23356788888776666666665521 145666665
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0047 Score=59.78 Aligned_cols=112 Identities=17% Similarity=0.111 Sum_probs=80.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHc-------CC--eEEEEecCcchhhhHHHHhcCCC----CeEEEEEeccccCCCcceee
Q 039397 49 VVIITGASSDIGEQIAYEYAKR-------KA--NLVLVARRENRLQGSTIDEYNPI----NEVTLVSLNNKESKAVDHLV 115 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~-------G~--~Vv~~~r~~~~l~~~~~~~~~~~----~~~~~~~~d~~~~g~iDvlV 115 (349)
+|.|+|++|.+|.++|..|+.. |. +++++++++++++..+.|+.+.. .++.+...|.+.+...|++|
T Consensus 102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kdaDiVV 181 (444)
T PLN00112 102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQDAEWAL 181 (444)
T ss_pred EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhCcCCEEE
Confidence 6999999999999999999998 64 89999999999988887774332 23443445678888999999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
..||.... + . ++-.+.++.|..-.-...+.+.++- ..++.||++|
T Consensus 182 itAG~prk-p-----G-~tR~dLl~~N~~I~k~i~~~I~~~a-~p~~ivIVVs 226 (444)
T PLN00112 182 LIGAKPRG-P-----G-MERADLLDINGQIFAEQGKALNEVA-SRNVKVIVVG 226 (444)
T ss_pred ECCCCCCC-C-----C-CCHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEcC
Confidence 99997532 1 1 2235677888776655555554421 2346666666
|
|
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0016 Score=46.29 Aligned_cols=38 Identities=26% Similarity=0.359 Sum_probs=24.2
Q ss_pred CCCCC-CEEEEeCCCchHHHH--HHHHHHHcCCeEEEEecCc
Q 039397 43 ENMED-KVVIITGASSDIGEQ--IAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 43 ~~l~~-k~vlVTGas~GIG~a--la~~la~~G~~Vv~~~r~~ 81 (349)
.+++| |+|||+|+|+|.|++ |+..+ ..|++.+.+....
T Consensus 34 ~~~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk 74 (78)
T PF12242_consen 34 GKINGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK 74 (78)
T ss_dssp ---TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred CCCCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence 34566 999999999999999 55555 6788888887653
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0012 Score=56.45 Aligned_cols=72 Identities=21% Similarity=0.293 Sum_probs=44.6
Q ss_pred CCCCEEEEeCCC----------------chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----
Q 039397 45 MEDKVVIITGAS----------------SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---- 104 (349)
Q Consensus 45 l~~k~vlVTGas----------------~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---- 104 (349)
|+||+||||+|. |-.|.++|+++..+||+|+++..... +.. ...+..+...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i~v~sa~e 71 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVIRVESAEE 71 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEEE-SSHHH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEEEecchhh
Confidence 579999999874 78999999999999999999988732 110 1123333333
Q ss_pred -----cccCCCcceeeecCcCCCCcc
Q 039397 105 -----NKESKAVDHLVNTASLGHTFF 125 (349)
Q Consensus 105 -----~~~~g~iDvlVnnAg~~~~~~ 125 (349)
.+....-|++|++|+++...+
T Consensus 72 m~~~~~~~~~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 72 MLEAVKELLPSADIIIMAAAVSDFRP 97 (185)
T ss_dssp HHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred hhhhhccccCcceeEEEecchhheee
Confidence 233345599999999876544
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.003 Score=56.66 Aligned_cols=193 Identities=15% Similarity=0.089 Sum_probs=117.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEeccccC-------CCcceee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLNNKES-------KAVDHLV 115 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d~~~~-------g~iDvlV 115 (349)
+++|-++-|.||||.+|+.++.+|++.|-+|++-.|-.+. ...+ ......+.+.+...|..+. ..-+++|
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~l--kvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVI 135 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHL--KVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVI 135 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhhe--eecccccceeeeccCCCCHHHHHHHHHhCcEEE
Confidence 4667789999999999999999999999999999986542 1111 1111234566777764333 3348899
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYES 195 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~ 195 (349)
|..|--... ..+ ..-|+|+.++-.+++.+-..-. -+.|++|+..+. ....+-|=-||++-+--++.
T Consensus 136 NLIGrd~eT--------knf-~f~Dvn~~~aerlAricke~GV---erfIhvS~Lgan--v~s~Sr~LrsK~~gE~aVrd 201 (391)
T KOG2865|consen 136 NLIGRDYET--------KNF-SFEDVNVHIAERLARICKEAGV---ERFIHVSCLGAN--VKSPSRMLRSKAAGEEAVRD 201 (391)
T ss_pred Eeecccccc--------CCc-ccccccchHHHHHHHHHHhhCh---hheeehhhcccc--ccChHHHHHhhhhhHHHHHh
Confidence 988853221 111 2336788888888887754322 379999988754 34456678888877654433
Q ss_pred HHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHH---------HHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 196 LRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKE---------EREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 196 la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++. ..+.+.|.-+-...-+ ..... ...|.+ ..+..+..+-+-|||.+|+.++.++.+
T Consensus 202 ---afP---eAtIirPa~iyG~eDr-fln~y---a~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s 267 (391)
T KOG2865|consen 202 ---AFP---EATIIRPADIYGTEDR-FLNYY---ASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDS 267 (391)
T ss_pred ---hCC---cceeechhhhcccchh-HHHHH---HHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccc
Confidence 333 3466777554322111 00000 001111 111122344458999999999988743
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0055 Score=56.78 Aligned_cols=112 Identities=15% Similarity=0.063 Sum_probs=78.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCCeEEEEE--ec---cccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPINEVTLVS--LN---NKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~--~d---~~~~g~iDvlVnnAg~~ 121 (349)
++.|+|++|.+|.++|..|+.+| .+++++|.+ +.+..+.|+.+......... .+ .+.....|++|..||..
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~ 79 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVP 79 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCC
Confidence 68899999999999999999998 489999998 55555666644432222322 33 57788899999999985
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
... . +.-.+.++.|..-.....+.+.++ ...+.+|++|-..
T Consensus 80 ~k~------g-~tR~dll~~N~~i~~~i~~~i~~~--~p~a~vivvtNPv 120 (310)
T cd01337 80 RKP------G-MTRDDLFNINAGIVRDLATAVAKA--CPKALILIISNPV 120 (310)
T ss_pred CCC------C-CCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccCch
Confidence 321 1 223577888887777777766655 2346777776544
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.006 Score=56.67 Aligned_cols=114 Identities=19% Similarity=0.199 Sum_probs=75.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCc--chhhhHHHHhcC----CCCeEEE-EEeccccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRE--NRLQGSTIDEYN----PINEVTL-VSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~--~~l~~~~~~~~~----~~~~~~~-~~~d~~~~g~iDvlVnnAg 119 (349)
++.|+|++|.+|..++..|+..|. +|++++|++ ++++....++.+ ....... ...|.+.....|++|.++|
T Consensus 2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~~l~~aDiViitag 81 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGSDIVIITAG 81 (309)
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHHHhCCCCEEEEecC
Confidence 689999999999999999999996 499999965 555554444421 1111222 2245566788999999999
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
.... +. +.-...++.|+.-.....+.+.+.. .++.+|++++..
T Consensus 82 ~p~~------~~-~~r~dl~~~n~~i~~~~~~~i~~~~--~~~~viv~~npv 124 (309)
T cd05294 82 VPRK------EG-MSRLDLAKKNAKIVKKYAKQIAEFA--PDTKILVVTNPV 124 (309)
T ss_pred CCCC------CC-CCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEeCCch
Confidence 7432 11 1224566667766666666555442 346788877643
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.002 Score=54.21 Aligned_cols=44 Identities=20% Similarity=0.370 Sum_probs=38.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
.+++||+++|.|++.-+|..+++.|.++|++|.++.|+.+++.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~ 83 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE 83 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence 47999999999997778999999999999999999998765543
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0014 Score=63.29 Aligned_cols=73 Identities=22% Similarity=0.233 Sum_probs=57.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
++++|+++|.|+ ||+|+.+++.|+++|. +++++.|+.++.+.++..+.. ...+..+ .+.....|++||+.+.
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~~~~~~~~l~~~l~~aDiVI~aT~a 252 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----ASAHYLSELPQLIKKADIIIAAVNV 252 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----CeEecHHHHHHHhccCCEEEECcCC
Confidence 578999999998 9999999999999995 799999998888777766521 1233333 3445678999999876
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 253 ~ 253 (414)
T PRK13940 253 L 253 (414)
T ss_pred C
Confidence 3
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0012 Score=63.27 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=50.2
Q ss_pred EEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------cCCCcceeeecCcC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------ESKAVDHLVNTASL 120 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~g~iDvlVnnAg~ 120 (349)
|+|-|| |.+|+.+++.|++++- +|++.+|+.++++++.+++ ....+..+.+|.. ...+.|++||++|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 689999 9999999999999974 8999999999988777654 3446777777722 23466999999986
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 78 ~ 78 (386)
T PF03435_consen 78 F 78 (386)
T ss_dssp G
T ss_pred c
Confidence 4
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0072 Score=51.41 Aligned_cols=118 Identities=18% Similarity=0.052 Sum_probs=68.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCC-Ce--EEEEEecccc---CCCcceeeecC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI-NE--VTLVSLNNKE---SKAVDHLVNTA 118 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~-~~--~~~~~~d~~~---~g~iDvlVnnA 118 (349)
-+++++|-.|++.|. ++..++++|.+|+.++++++.++...+.+.... .+ +.++.+|... .+.+|.++.|.
T Consensus 22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~vi~n~ 98 (188)
T PRK14968 22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPFRGDKFDVILFNP 98 (188)
T ss_pred cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccccccCceEEEECC
Confidence 357889999888776 666667779999999999887776655542111 11 6666666221 23699999998
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhh---hHHHHHHhccccccCCCeEEEEe
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWG---NVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g---~~~l~~~~lp~m~~~~g~IV~is 168 (349)
......+..... +.+...+..+..+ .-.+++.+.+.|+ .+|.++++.
T Consensus 99 p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk-~gG~~~~~~ 148 (188)
T PRK14968 99 PYLPTEEEEEWD--DWLNYALSGGKDGREVIDRFLDEVGRYLK-PGGRILLLQ 148 (188)
T ss_pred CcCCCCchhhhh--hhhhhhhccCcChHHHHHHHHHHHHHhcC-CCeEEEEEE
Confidence 765433222210 1222222222222 2235666666664 456665553
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.017 Score=54.48 Aligned_cols=112 Identities=16% Similarity=0.148 Sum_probs=75.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCC---CeEEEEE-eccccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPI---NEVTLVS-LNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~~-~d~~~~g~iDvlVnnAg~~ 121 (349)
++|.|+|+ |.+|..+|..++.+|. +++++|.+++.++..+.|+.+.. ....+.. .|.+....-|++|..||..
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~~~daDiVVitAG~~ 116 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAVTAGSDLCIVTAGAR 116 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHHhCCCCEEEECCCCC
Confidence 68999996 9999999999998884 79999999988887777773321 1223322 3566677899999999985
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... . ++-.+.+..|..=.-.+.+....+ ..++.+|++|-
T Consensus 117 ~k~------g-~tR~dll~~N~~I~~~i~~~I~~~--~p~~ivivvtN 155 (350)
T PLN02602 117 QIP------G-ESRLNLLQRNVALFRKIIPELAKY--SPDTILLIVSN 155 (350)
T ss_pred CCc------C-CCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEecC
Confidence 321 1 112456666665555555554443 23467777763
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0072 Score=50.47 Aligned_cols=150 Identities=16% Similarity=0.059 Sum_probs=94.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCccee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHL 114 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvl 114 (349)
.|+++.++|.||+|-.|..+.+++++.+ .+|+++.|++..-.++ ...+..+..| .+...++|++
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k~v~q~~vDf~Kl~~~a~~~qg~dV~ 87 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DKVVAQVEVDFSKLSQLATNEQGPDVL 87 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cceeeeEEechHHHHHHHhhhcCCceE
Confidence 3567889999999999999999999998 4899999986332221 2234444455 4455678999
Q ss_pred eecCcCCCCccccc-cCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHHH
Q 039397 115 VNTASLGHTFFFEE-VTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTF 192 (349)
Q Consensus 115 VnnAg~~~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 192 (349)
+++-|......-.+ .-..+ .+.. +.+++++- +++ .+++.+||..+.-. ....|--.|.-++.=
T Consensus 88 FcaLgTTRgkaGadgfykvD-hDyv--------l~~A~~AK----e~Gck~fvLvSS~GAd~s--SrFlY~k~KGEvE~~ 152 (238)
T KOG4039|consen 88 FCALGTTRGKAGADGFYKVD-HDYV--------LQLAQAAK----EKGCKTFVLVSSAGADPS--SRFLYMKMKGEVERD 152 (238)
T ss_pred EEeecccccccccCceEeec-hHHH--------HHHHHHHH----hCCCeEEEEEeccCCCcc--cceeeeeccchhhhh
Confidence 99887654322111 00001 1111 22334332 223 58999999776432 234588888887766
Q ss_pred HHHHHHHhcCCeeEEEEecCcccCCCCC
Q 039397 193 YESLRFELNDEVGITIATHGWIGIEMTK 220 (349)
Q Consensus 193 ~~~la~el~~~I~v~~v~PG~v~T~~~~ 220 (349)
+..| .- =++..+.||++..+...
T Consensus 153 v~eL----~F-~~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 153 VIEL----DF-KHIIILRPGPLLGERTE 175 (238)
T ss_pred hhhc----cc-cEEEEecCcceeccccc
Confidence 5544 22 27788999999766543
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0027 Score=58.05 Aligned_cols=58 Identities=19% Similarity=0.313 Sum_probs=46.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
.-+++||.|+|.|+|+-.|+.++..|.++|++|.++.|....+.+.. .+-|++||..|
T Consensus 154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~~~--------------------~~aDIvI~AtG 211 (283)
T PRK14192 154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPELV--------------------KQADIIVGAVG 211 (283)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHHHh--------------------ccCCEEEEccC
Confidence 34789999999999888999999999999999999998544433211 35688888886
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0063 Score=59.56 Aligned_cols=116 Identities=8% Similarity=0.052 Sum_probs=68.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~~ 121 (349)
++.+|+++|+|++ |+|.++|+.|+++|++|.+.+.+..... ..++......+.+.... .......|.+|...|+.
T Consensus 2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~--~~~l~~~~~gi~~~~g~~~~~~~~~~d~vv~spgi~ 78 (445)
T PRK04308 2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPER--VAQIGKMFDGLVFYTGRLKDALDNGFDILALSPGIS 78 (445)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchh--HHHHhhccCCcEEEeCCCCHHHHhCCCEEEECCCCC
Confidence 4778999999985 9999999999999999999987654311 11221111122222222 12235689999999986
Q ss_pred CCccccccCCcchHHHH--HHhHhhhhHHHHHHhccccccCCCeEEEEeccccc
Q 039397 122 HTFFFEEVTDTSIFPRL--LDINFWGNVYPTFVALPYLHESNGRVVVNASVENW 173 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~--~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~ 173 (349)
...+ .+.+. -.+++.+-..+...... +.+..+|.|+...|.
T Consensus 79 ~~~p--------~~~~a~~~~i~v~~~~~~~~~~~~---~~~~~~I~ITGT~GK 121 (445)
T PRK04308 79 ERQP--------DIEAFKQNGGRVLGDIELLADIVN---RRGDKVIAITGSNGK 121 (445)
T ss_pred CCCH--------HHHHHHHcCCcEEEhHHHHHHhhh---cCCCCEEEEECCCcH
Confidence 3321 22222 23555555544433221 112457777766654
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0093 Score=52.04 Aligned_cols=194 Identities=16% Similarity=0.125 Sum_probs=112.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc-CC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcce
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKR-KA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDH 113 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~-G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDv 113 (349)
-+-.++||||+-|-+|.++|..|-.+ |. +|++.+....... +.+.+ -++-.| .--..++|.
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~~G---PyIy~DILD~K~L~eIVVn~RIdW 113 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTDVG---PYIYLDILDQKSLEEIVVNKRIDW 113 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hcccC---CchhhhhhccccHHHhhcccccce
Confidence 34568999999999999999999875 64 6777665543321 11111 111122 112347899
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------C------Cchh
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------P------RMSL 181 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------~------~~~~ 181 (349)
|||-.+....-. ....--..++|..|..++++.+..+-. +|..-|.+.++.|. | ....
T Consensus 114 L~HfSALLSAvG------E~NVpLA~~VNI~GvHNil~vAa~~kL----~iFVPSTIGAFGPtSPRNPTPdltIQRPRTI 183 (366)
T KOG2774|consen 114 LVHFSALLSAVG------ETNVPLALQVNIRGVHNILQVAAKHKL----KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTI 183 (366)
T ss_pred eeeHHHHHHHhc------ccCCceeeeecchhhhHHHHHHHHcCe----eEeecccccccCCCCCCCCCCCeeeecCcee
Confidence 998654321111 122345568999999999998876632 34444555555432 2 2457
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEE-ecCcccCC-CCCCccccccchhhhhHHHH-----------hhhcCCCCHHH
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIA-THGWIGIE-MTKGKFMLEDGAEMQWKEER-----------EVHVAGGPVED 248 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v-~PG~v~T~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ed 248 (349)
|+.||--.+-+-+.+...++- .+.++ .||.+... -..+. .+-....|.... +....++--+|
T Consensus 184 YGVSKVHAEL~GEy~~hrFg~--dfr~~rfPg~is~~~pgggt---tdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~d 258 (366)
T KOG2774|consen 184 YGVSKVHAELLGEYFNHRFGV--DFRSMRFPGIISATKPGGGT---TDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTD 258 (366)
T ss_pred echhHHHHHHHHHHHHhhcCc--cceecccCcccccCCCCCCc---chhHHHHHHHHHHcCCcccccCCCccCceeehHH
Confidence 999999999999998887763 44444 36655321 11110 000011111111 11123455689
Q ss_pred HHHHHHHHHhcCC
Q 039397 249 FARLIVSGACRGD 261 (349)
Q Consensus 249 vA~~i~~l~~~~~ 261 (349)
+-++++.++..+.
T Consensus 259 c~~~~~~~~~a~~ 271 (366)
T KOG2774|consen 259 CMASVIQLLAADS 271 (366)
T ss_pred HHHHHHHHHhCCH
Confidence 9999888887653
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0089 Score=55.48 Aligned_cols=112 Identities=14% Similarity=0.052 Sum_probs=73.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCCeEEEEE--ec---cccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLVS--LN---NKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~--~d---~~~~g~iDvlVnnAg~~ 121 (349)
+|.|+|++|.+|.++|..|+..|. +++++|+++ .+..+.|+.+......... .+ .+.....|++|..||..
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~ 78 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVP 78 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCC
Confidence 378999999999999999999885 899999987 3444455544332222222 22 56778899999999975
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
... . ++-.+.+..|..-.-...+.+.++ ..++.||++|-..
T Consensus 79 ~~~------g-~~R~dll~~N~~I~~~i~~~i~~~--~p~~iiivvsNPv 119 (312)
T TIGR01772 79 RKP------G-MTRDDLFNVNAGIVKDLVAAVAES--CPKAMILVITNPV 119 (312)
T ss_pred CCC------C-ccHHHHHHHhHHHHHHHHHHHHHh--CCCeEEEEecCch
Confidence 321 1 223567778877554455444443 2346677766543
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.005 Score=56.58 Aligned_cols=76 Identities=18% Similarity=0.245 Sum_probs=51.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcc---hhhhHHHHhcCCC-CeEEEEEecc-----ccCCCcce
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARREN---RLQGSTIDEYNPI-NEVTLVSLNN-----KESKAVDH 113 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~---~l~~~~~~~~~~~-~~~~~~~~d~-----~~~g~iDv 113 (349)
++++|+++|.|+ ||-+++++..|+.+|+ +|.+++|+.+ +.+++++++.... ..+.....+. +...+.|+
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDi 199 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI 199 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCE
Confidence 578899999997 6779999999999996 8999999954 6666665552211 1122222211 13346899
Q ss_pred eeecCcC
Q 039397 114 LVNTASL 120 (349)
Q Consensus 114 lVnnAg~ 120 (349)
+||+--+
T Consensus 200 vINaTp~ 206 (288)
T PRK12749 200 LTNGTKV 206 (288)
T ss_pred EEECCCC
Confidence 9997543
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.01 Score=55.40 Aligned_cols=113 Identities=18% Similarity=0.066 Sum_probs=75.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCcc--hhhhHHHHhcCCC----CeEEEEEeccccCCCccee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-------NLVLVARREN--RLQGSTIDEYNPI----NEVTLVSLNNKESKAVDHL 114 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~~--~l~~~~~~~~~~~----~~~~~~~~d~~~~g~iDvl 114 (349)
++|.|+|++|.+|..+|..|+..|. +++++|+++. +++..+.|+.+.. ..+.....|.+....-|++
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~daDiV 84 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDADVA 84 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCCCEE
Confidence 4799999999999999999998874 7999999543 4565555553221 2334444556778889999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
|..||..... . ++-.+.++.|..-.-.+.+...++-. ..+.++++|
T Consensus 85 VitaG~~~k~------g-~tR~dll~~Na~i~~~i~~~i~~~~~-~~~iiivvs 130 (326)
T PRK05442 85 LLVGARPRGP------G-MERKDLLEANGAIFTAQGKALNEVAA-RDVKVLVVG 130 (326)
T ss_pred EEeCCCCCCC------C-CcHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeC
Confidence 9999975321 1 22356777777665555555544311 246666666
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.029 Score=52.42 Aligned_cols=117 Identities=19% Similarity=0.183 Sum_probs=73.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcC----CCCeEEEEE-eccccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYN----PINEVTLVS-LNNKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~~~-~d~~~~g~iDvlVnnAg 119 (349)
+.+++.|.|| |.+|..+|..++..|. +|+++|++++..+....++.. ......... .|.+.....|++|+.||
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~~l~~aDiVI~tag 83 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYEDIAGSDVVIVTAG 83 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCHHHhCCCCEEEECCC
Confidence 4578999995 8899999999999994 999999998865443333311 111223332 56677788999999999
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEec
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNAS 169 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~isS 169 (349)
......-.+. +.+ -.+.+..|+. +.+...+.+.+ ..+.++++|-
T Consensus 84 ~~~~~~~~~~-~~~-r~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 84 LTKRPGKSDK-EWN-RDDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred CCCCCCCCcC-CCC-HHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence 8643221111 112 2455566654 44555555433 2356666653
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.015 Score=54.13 Aligned_cols=112 Identities=17% Similarity=0.130 Sum_probs=77.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCC---CeEEEE-EeccccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPI---NEVTLV-SLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~-~~d~~~~g~iDvlVnnAg~~ 121 (349)
.+|.|+|+ |.+|..+|..|+..|. +++++|++++.++..+.|+.+.. ...... ..|.+.....|++|..||..
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvitaG~~ 82 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVTAGAR 82 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEECCCCC
Confidence 47899996 9999999999999874 79999999988877777763322 111333 25666788899999999975
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... . ++-...++.|..-...+.+.+..+ ..++.++++|-
T Consensus 83 ~k~---g----~~R~dll~~N~~i~~~~~~~i~~~--~p~~~vivvsN 121 (312)
T cd05293 83 QNE---G----ESRLDLVQRNVDIFKGIIPKLVKY--SPNAILLVVSN 121 (312)
T ss_pred CCC---C----CCHHHHHHHHHHHHHHHHHHHHHh--CCCcEEEEccC
Confidence 431 1 122456777776655555555444 23477777774
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.022 Score=53.16 Aligned_cols=113 Identities=20% Similarity=0.207 Sum_probs=73.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCC----CCeEEEE-EeccccCCCcceeeecC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNP----INEVTLV-SLNNKESKAVDHLVNTA 118 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~-~~d~~~~g~iDvlVnnA 118 (349)
.+.+++.|.|| |.+|..++..++..| ++|+++|++++.++....++... ....... ..|.+....-|++|..+
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~~l~~ADiVVita 81 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYEDIKDSDVVVITA 81 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHHHhCCCCEEEECC
Confidence 35678999997 889999999999999 79999999987766544444221 1112222 24656777889999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEec
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNAS 169 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~isS 169 (349)
|..... . ..-...+..|.. +.+.+.+.|.+ .++.+|++|-
T Consensus 82 g~~~~~------g-~~r~dll~~n~~----i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 82 GVQRKE------E-MTREDLLTINGK----IMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred CCCCCC------C-CCHHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence 975321 1 223456666763 34444444432 2355676654
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0073 Score=56.57 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=48.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEE-EEec-----cc-cCC-CcceeeecC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL-VSLN-----NK-ESK-AVDHLVNTA 118 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~-~~~d-----~~-~~g-~iDvlVnnA 118 (349)
|+++||+||+||+|....+.....|++++++..++++.+ ...++ +...+.- ...| .+ ..| ++|+++...
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l--GAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~v 219 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL--GADHVINYREEDFVEQVRELTGGKGVDVVLDTV 219 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc--CCCEEEcCCcccHHHHHHHHcCCCCceEEEECC
Confidence 899999999999999999999999988887777776666 44443 1111211 1221 11 223 699999988
Q ss_pred cC
Q 039397 119 SL 120 (349)
Q Consensus 119 g~ 120 (349)
|.
T Consensus 220 G~ 221 (326)
T COG0604 220 GG 221 (326)
T ss_pred CH
Confidence 73
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0064 Score=52.85 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=34.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
.+++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3789999999998 8999999999999999999998754
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0015 Score=60.78 Aligned_cols=70 Identities=16% Similarity=0.174 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----cccCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----NKESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----~~~~g~iDvlVnnAg~ 120 (349)
.+++++|+||++++|.++++.+...|++|+.+.++.++.+.+. +. .. ...+..+ ....+++|++++|+|.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--~~--~~~~~~~~~~~~~~~~~~~d~v~~~~g~ 236 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-EL--GA--DYVIDGSKFSEDVKKLGGADVVIELVGS 236 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-Hc--CC--cEEEecHHHHHHHHhccCCCEEEECCCh
Confidence 4789999999999999999999999999999998876655442 21 11 1111111 2233478999999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.028 Score=52.21 Aligned_cols=111 Identities=23% Similarity=0.208 Sum_probs=75.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCC---CeEEEEEeccccCCCcceeeecCcCCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPI---NEVTLVSLNNKESKAVDHLVNTASLGHT 123 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~iDvlVnnAg~~~~ 123 (349)
++.|.|+ |.+|..+|..|+.+| .+|+++++++++.+..+.++.+.. ........|.+.....|++|.++|....
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~~~ 80 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGANQK 80 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCCCC
Confidence 4788898 899999999999999 689999999887776555553221 1223344566777889999999997532
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
. . +...+.+..|..-.-.+.+.+..+ ..+|.|++++.
T Consensus 81 ~------~-~~r~dl~~~n~~i~~~~~~~l~~~--~~~giiiv~tN 117 (308)
T cd05292 81 P------G-ETRLDLLKRNVAIFKEIIPQILKY--APDAILLVVTN 117 (308)
T ss_pred C------C-CCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEecC
Confidence 1 1 233456666766555555555443 23467777753
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.024 Score=52.28 Aligned_cols=111 Identities=21% Similarity=0.200 Sum_probs=76.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCC----CeEEEEE-eccccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPI----NEVTLVS-LNNKESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~----~~~~~~~-~d~~~~g~iDvlVnnAg~ 120 (349)
++|.|+|| |+||..+|..|+.++. ++++.+++++..+..+.|+.+.. ....... .|.+....-|++|-.||.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvitAG~ 79 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVITAGV 79 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEeCCC
Confidence 36889999 9999999999988873 89999999888877777763321 2222222 336777789999999997
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
..... ++=.+.++.|..-.-.+.+.....- .++.++.+|
T Consensus 80 prKpG-------mtR~DLl~~Na~I~~~i~~~i~~~~--~d~ivlVvt 118 (313)
T COG0039 80 PRKPG-------MTRLDLLEKNAKIVKDIAKAIAKYA--PDAIVLVVT 118 (313)
T ss_pred CCCCC-------CCHHHHHHhhHHHHHHHHHHHHhhC--CCeEEEEec
Confidence 54321 2225778888877766766665542 235555554
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.016 Score=55.32 Aligned_cols=112 Identities=18% Similarity=0.133 Sum_probs=76.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-e----EEE----EecCcchhhhHHHHhcCCC----CeEEEEEeccccCCCcceee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-N----LVL----VARRENRLQGSTIDEYNPI----NEVTLVSLNNKESKAVDHLV 115 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-~----Vv~----~~r~~~~l~~~~~~~~~~~----~~~~~~~~d~~~~g~iDvlV 115 (349)
+|.|+||+|.+|.++|..++..|. . |.+ +++++++++..+.|+.+.. ..+.+...|.+.+...|++|
T Consensus 46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~kdaDIVV 125 (387)
T TIGR01757 46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEVFEDADWAL 125 (387)
T ss_pred EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHHhCCCCEEE
Confidence 799999999999999999999884 3 444 4889988888777763322 23443445678888999999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
..||..... . ++-.+.++.|..-.-...+.+.++- ...+.||++|
T Consensus 126 itAG~prkp------g-~tR~dll~~N~~I~k~i~~~I~~~a-~~~~iviVVs 170 (387)
T TIGR01757 126 LIGAKPRGP------G-MERADLLDINGQIFADQGKALNAVA-SKNCKVLVVG 170 (387)
T ss_pred ECCCCCCCC------C-CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcC
Confidence 999975321 1 2235677778766555555555431 1346666666
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0068 Score=55.24 Aligned_cols=44 Identities=16% Similarity=0.367 Sum_probs=39.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
-+++||.++|.|.|.-+|+-+|..|.++|++|.++.++...+.+
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~ 197 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMAS 197 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence 37999999999999999999999999999999999987654443
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.029 Score=55.48 Aligned_cols=44 Identities=14% Similarity=0.047 Sum_probs=38.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
...+.+|+|+|+ |.+|...+..+...|++|+++++++++++...
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae 205 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE 205 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 346889999997 89999999999999999999999998877543
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.019 Score=51.32 Aligned_cols=70 Identities=13% Similarity=0.207 Sum_probs=48.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlV 115 (349)
.++++++|+|+++ +|.++++.+...|.+|+++++++++.+... +.. . . ..+... ....+.+|+++
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g--~-~-~~~~~~~~~~~~~~~~~~~~~~d~vi 206 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELG--A-D-HVIDYKEEDLEEELRLTGGGGADVVI 206 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhC--C-c-eeccCCcCCHHHHHHHhcCCCCCEEE
Confidence 3578999999998 999999999999999999999876655442 221 1 1 111111 11235789999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+++|.
T Consensus 207 ~~~~~ 211 (271)
T cd05188 207 DAVGG 211 (271)
T ss_pred ECCCC
Confidence 98873
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.026 Score=52.38 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=73.5
Q ss_pred EEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCC-----CeEEEEEeccccCCCcceeeecCcCCC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPI-----NEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~-----~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
|.|.|+ |.+|..+|..|+.+|. +++++|.+++..+..+.|+.+.. ..+.....|.+....-|++|..||...
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~~ 80 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPSI 80 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCCC
Confidence 678898 9999999999999885 79999999988888777774321 234455567788888999999999853
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
.. ..+ .+-.+.++.|..-.-...+.+..+- .++.++++|
T Consensus 81 kp---g~t--r~R~dll~~N~~I~~~i~~~i~~~~--p~~i~ivvs 119 (307)
T cd05290 81 DP---GNT--DDRLDLAQTNAKIIREIMGNITKVT--KEAVIILIT 119 (307)
T ss_pred CC---CCC--chHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEec
Confidence 21 111 0024566666654444444443321 235555554
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0072 Score=55.02 Aligned_cols=67 Identities=21% Similarity=0.175 Sum_probs=49.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
+|+++|.|+ ||.+++++..|++.|+ +|.+++|+.++.+++++.+... . ..+. .....|++||+--+.
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~---~---~~~~-~~~~~dlvINaTp~G 189 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE---W---RPDL-GGIEADILVNVTPIG 189 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc---c---hhhc-ccccCCEEEECCccc
Confidence 578999996 9999999999999997 5999999998888776654211 0 0011 123479999986543
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0094 Score=48.54 Aligned_cols=45 Identities=18% Similarity=0.282 Sum_probs=40.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
..+++||.++|.|.|.-+|+.++..|.++|++|.+++++...+++
T Consensus 23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 448999999999999999999999999999999999987665554
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.023 Score=52.53 Aligned_cols=110 Identities=20% Similarity=0.202 Sum_probs=73.4
Q ss_pred EEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCC---CeEEEEE-eccccCCCcceeeecCcCCCC
Q 039397 50 VIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPI---NEVTLVS-LNNKESKAVDHLVNTASLGHT 123 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~~-~d~~~~g~iDvlVnnAg~~~~ 123 (349)
+.|.|+ |++|..+|..++.+| .+++++|+++++++....++.+.. ....... .|.+....-|++|..||....
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~~~l~~aDiVIitag~p~~ 79 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVITAGAPRK 79 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCHHHhCCCCEEEEcCCCCCC
Confidence 357787 679999999999999 689999999998888777763221 1223332 345677889999999997532
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
. . ++-...+..|..-...+.+.+..+- .++.++++|-
T Consensus 80 ~------~-~~R~~l~~~n~~i~~~~~~~i~~~~--p~~~viv~sN 116 (300)
T cd00300 80 P------G-ETRLDLINRNAPILRSVITNLKKYG--PDAIILVVSN 116 (300)
T ss_pred C------C-CCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEccC
Confidence 1 1 1224556666665555555554431 3477777764
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.011 Score=55.56 Aligned_cols=71 Identities=11% Similarity=0.082 Sum_probs=48.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEE-ec-----c-ccCCCcceeeecC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVS-LN-----N-KESKAVDHLVNTA 118 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~-~d-----~-~~~g~iDvlVnnA 118 (349)
|++++|+||+|++|.++++.....|+ +|+++++++++.+.+..++. ...+.... .+ . ...+++|+++++.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG--a~~vi~~~~~~~~~~i~~~~~~gvd~vid~~ 232 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG--FDAAINYKTDNVAERLRELCPEGVDVYFDNV 232 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHCCCCceEEEECC
Confidence 48999999999999999988888999 89999998877665544331 11111110 11 0 1124689998877
Q ss_pred c
Q 039397 119 S 119 (349)
Q Consensus 119 g 119 (349)
|
T Consensus 233 g 233 (345)
T cd08293 233 G 233 (345)
T ss_pred C
Confidence 6
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.011 Score=54.32 Aligned_cols=70 Identities=17% Similarity=0.238 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvlV 115 (349)
++++++|+|+++++|.++++.+...|++|+++++++++.+.. .+.. . +. .+... ....+++|+++
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g--~-~~-~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALG--A-DV-AINYRTEDFAEEVKEATGGRGVDVIL 213 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC--C-CE-EEeCCchhHHHHHHHHhCCCCeEEEE
Confidence 578999999999999999999999999999999987766654 2221 1 11 11111 11124699999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+++|.
T Consensus 214 ~~~g~ 218 (323)
T cd05276 214 DMVGG 218 (323)
T ss_pred ECCch
Confidence 99883
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0073 Score=55.76 Aligned_cols=69 Identities=22% Similarity=0.256 Sum_probs=49.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTA 118 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnA 118 (349)
.++.+++++|.|. |++|+.+++.|.+.|++|.+++|+.++.+... .. + ...+..+ .+.....|++||++
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~---G--~~~~~~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EM---G--LSPFHLSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc---C--CeeecHHHHHHHhCCCCEEEECC
Confidence 4678999999997 67999999999999999999999976544322 21 1 1222211 23345789999975
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0068 Score=60.11 Aligned_cols=74 Identities=18% Similarity=0.243 Sum_probs=56.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
++.+++++|.|+ |++|+.+++.|...|+ +|+++.|+.++.+.+..... +..+.....+ .+.....|++|.+.+.
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~~~~~dl~~al~~aDVVIsAT~s 339 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIYKPLDEMLACAAEADVVFTSTSS 339 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEeecHhhHHHHHhcCCEEEEccCC
Confidence 488999999999 9999999999999997 79999999988887776542 1122233332 2334678999987654
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0033 Score=57.50 Aligned_cols=71 Identities=18% Similarity=0.168 Sum_probs=57.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----cccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----NKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----~~~~g~iDvlVnnAg~~ 121 (349)
...+|-||+|..|.-+|++|+++|.+-++.+||.+++..+...+.. +...+++. .+...+.++|+||+|-.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~---~~~~~p~~~p~~~~~~~~~~~VVlncvGPy 82 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP---EAAVFPLGVPAALEAMASRTQVVLNCVGPY 82 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc---cccccCCCCHHHHHHHHhcceEEEeccccc
Confidence 4689999999999999999999999999999999999988877632 22233333 44557889999999964
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0074 Score=58.51 Aligned_cols=71 Identities=15% Similarity=0.313 Sum_probs=53.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
++.+++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++.+..+.. . .+..+ .+.....|++|.+.|.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~---~--~i~~~~l~~~l~~aDvVi~aT~s 250 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG---E--AVKFEDLEEYLAEADIVISSTGA 250 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---e--EeeHHHHHHHHhhCCEEEECCCC
Confidence 578899999997 999999999999999 7899999998877766655421 1 22222 2334578999998764
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.048 Score=49.38 Aligned_cols=110 Identities=20% Similarity=0.234 Sum_probs=71.3
Q ss_pred EEEeCCCchHHHHHHHHHHHcC----CeEEEEecCcchhhhHHHHhcCCCC---eEEEEEe-c-cccCCCcceeeecCcC
Q 039397 50 VIITGASSDIGEQIAYEYAKRK----ANLVLVARRENRLQGSTIDEYNPIN---EVTLVSL-N-NKESKAVDHLVNTASL 120 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G----~~Vv~~~r~~~~l~~~~~~~~~~~~---~~~~~~~-d-~~~~g~iDvlVnnAg~ 120 (349)
+.|.||+|.+|..++..|+..| .+|++.|+++++++....++.+... ...+... | .+.....|++|..+|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 4689998899999999999999 7999999999888877766622211 1222223 3 4667789999999987
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
.... . +.-...+.-|+.-...+.+.+..+- .++.++++|
T Consensus 81 ~~~~---g----~~r~~~~~~n~~i~~~i~~~i~~~~--p~a~~i~~t 119 (263)
T cd00650 81 GRKP---G----MGRLDLLKRNVPIVKEIGDNIEKYS--PDAWIIVVS 119 (263)
T ss_pred CCCc---C----CCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEec
Confidence 5332 1 1113344445554444444444331 346677765
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.023 Score=54.21 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=51.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----cccCCCcceeeecCcC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----NKESKAVDHLVNTASL 120 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~iDvlVnnAg~ 120 (349)
+.+++++|.|+ |.+|+..++.+.+.|++|++++|+.++++....... ..+.....+ .+.....|++|+++++
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g---~~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG---GRIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC---ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 56778999988 799999999999999999999999887665544331 111111111 2223567999998865
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.014 Score=54.29 Aligned_cols=42 Identities=12% Similarity=0.191 Sum_probs=37.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
.|++++|+||+|++|..+++.+...|++|+.+++++++.+.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~ 179 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL 179 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 578999999999999999988888999999999988776654
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0088 Score=58.13 Aligned_cols=71 Identities=18% Similarity=0.327 Sum_probs=53.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEe-c-cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSL-N-NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-d-~~~~g~iDvlVnnAg~ 120 (349)
++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++.+..+.++. .. .+.. | .+.....|++|++.|.
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---~~--~~~~~~~~~~l~~aDvVI~aT~s 252 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---GE--AIPLDELPEALAEADIVISSTGA 252 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---Cc--EeeHHHHHHHhccCCEEEECCCC
Confidence 578899999987 9999999999999997 89999999888776666542 11 2222 2 2234568999998764
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.03 Score=54.31 Aligned_cols=114 Identities=12% Similarity=0.023 Sum_probs=77.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHc---CC----eEEEEec--CcchhhhHHHHhcCCC----CeEEEEEeccccCCCccee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKR---KA----NLVLVAR--RENRLQGSTIDEYNPI----NEVTLVSLNNKESKAVDHL 114 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~---G~----~Vv~~~r--~~~~l~~~~~~~~~~~----~~~~~~~~d~~~~g~iDvl 114 (349)
-+|+||||+|-||.++.-.+++- |. .+++++. +++.++..+-++.+.. ..+.+...+.+.+...|++
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea~~daDvv 203 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVAFKDAHVI 203 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHHhCCCCEE
Confidence 36999999999999999999983 42 4777888 5777777766663221 2344445567888899999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
|..||..... . ++-.+.++.|..-.-...+++..+-.+.. +|+.+.|
T Consensus 204 Iitag~prk~------G-~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~-~VlVv~t 250 (452)
T cd05295 204 VLLDDFLIKE------G-EDLEGCIRSRVAICQLYGPLIEKNAKEDV-KVIVAGR 250 (452)
T ss_pred EECCCCCCCc------C-CCHHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEEeC
Confidence 9999975321 1 22356788888776666666665533223 4555544
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.015 Score=54.91 Aligned_cols=43 Identities=14% Similarity=0.147 Sum_probs=37.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
.|++++|+||+|++|..+++.....|++|+.+++++++.+.+.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~ 200 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK 200 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 5889999999999999999888889999999998887766543
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.082 Score=61.78 Aligned_cols=165 Identities=11% Similarity=0.050 Sum_probs=98.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----------cccCCCcce
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----------NKESKAVDH 113 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----------~~~~g~iDv 113 (349)
+.++.++|++.+++++.+++.+|.++|++|+++...+.. .............+..-..| ....+.++.
T Consensus 1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 1831 (2582)
T TIGR02813 1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV-SHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDG 1831 (2582)
T ss_pred ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc-cccccccccccccccccccchHHHHHHHHhhhccccccce
Confidence 457888898889999999999999999999887422110 00000000000000000111 234567889
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc-CCCeEEEEeccccccCCCCchhh--------HH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-SNGRVVVNASVENWLPLPRMSLY--------AS 184 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~~g~IV~isS~~~~~~~~~~~~Y--------~a 184 (349)
+||..+...... ..... ......-...+...+.+.|.+.+.+.. +++.++.+++..|..++.+...- ..
T Consensus 1832 ~i~l~~~~~~~~-~~~~~-~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~ 1909 (2582)
T TIGR02813 1832 FIHLQPQHKSVA-DKVDA-IELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAEL 1909 (2582)
T ss_pred EEEecccccccc-ccccc-cccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccch
Confidence 998776542200 00000 011111223455577788887666543 34788999999887776433221 23
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecC
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHG 212 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG 212 (349)
..+++.+|+|++++|+..- +|...+.|.
T Consensus 1910 ~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1910 NQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred hhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence 5899999999999999876 888888775
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0044 Score=54.00 Aligned_cols=119 Identities=16% Similarity=0.108 Sum_probs=71.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc-hhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-RLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~-~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
+++||.++|.|| |.+|..-++.|++.|++|++++.+.. .++++.. . ..+.++..+ .......|.+|.+.+.
T Consensus 6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~----~-~~i~~~~~~~~~~dl~~~~lVi~at~d 79 (205)
T TIGR01470 6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAE----Q-GGITWLARCFDADILEGAFLVIAATDD 79 (205)
T ss_pred EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH----c-CCEEEEeCCCCHHHhCCcEEEEECCCC
Confidence 689999999997 77899999999999999999987654 2332221 1 245554433 2233456777665543
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
..... .. -.+.-..-+-+|+.+-...+....|...++++-.|-|||..
T Consensus 80 ~~ln~--~i-~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G 127 (205)
T TIGR01470 80 EELNR--RV-AHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGG 127 (205)
T ss_pred HHHHH--HH-HHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCC
Confidence 20000 00 00000112335666666666777787766666666677653
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.013 Score=48.82 Aligned_cols=46 Identities=24% Similarity=0.388 Sum_probs=36.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
-+++||+++|.|.|.-+|+-++..|.++|++|.++..+.+.+++..
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~ 77 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT 77 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee
Confidence 3799999999999999999999999999999999988876665433
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0053 Score=56.70 Aligned_cols=73 Identities=22% Similarity=0.210 Sum_probs=56.7
Q ss_pred EEEEeCCCchHHHHHHHHHHH----cCCeEEEEecCcchhhhHHHHhcCC----CCeEEEEEeccc-------cCCCcce
Q 039397 49 VVIITGASSDIGEQIAYEYAK----RKANLVLVARRENRLQGSTIDEYNP----INEVTLVSLNNK-------ESKAVDH 113 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~----~G~~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~~~d~~-------~~g~iDv 113 (349)
-++|-||||.-|..+++++.+ +|....+.+||+++++++...+... ......+.+|.. -..+..+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 489999999999999999999 8999999999999999887766211 122336677732 2345689
Q ss_pred eeecCcCC
Q 039397 114 LVNTASLG 121 (349)
Q Consensus 114 lVnnAg~~ 121 (349)
+|||+|-.
T Consensus 87 ivN~vGPy 94 (423)
T KOG2733|consen 87 IVNCVGPY 94 (423)
T ss_pred EEeccccc
Confidence 99999864
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.017 Score=52.65 Aligned_cols=45 Identities=16% Similarity=0.216 Sum_probs=40.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.++|.|-|.-+|+-++..|.++|++|.++.+....+.+.
T Consensus 155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~ 199 (285)
T PRK10792 155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHH 199 (285)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHH
Confidence 478999999999999999999999999999999999876665543
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.022 Score=52.92 Aligned_cols=43 Identities=12% Similarity=0.251 Sum_probs=37.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
.|++++|+||+|++|..+++.....|++|+.+.+++++.+.+.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~ 185 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK 185 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 5789999999999999999988899999999998887765543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.022 Score=53.08 Aligned_cols=72 Identities=18% Similarity=0.240 Sum_probs=49.5
Q ss_pred CCC-CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc----cCCCcceeeec
Q 039397 43 ENM-EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK----ESKAVDHLVNT 117 (349)
Q Consensus 43 ~~l-~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~----~~g~iDvlVnn 117 (349)
.+. .|++++|+|++ |+|...++.....|++|++++|++++++...+- +.+......|.+ ..+.+|++++.
T Consensus 162 ~~~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd~~i~~~~~~~~~~~~~~~d~ii~t 236 (339)
T COG1064 162 ANVKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GADHVINSSDSDALEAVKEIADAIIDT 236 (339)
T ss_pred cCCCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCcEEEEcCCchhhHHhHhhCcEEEEC
Confidence 344 48999999998 999988888888999999999999987754432 112222211211 11237888887
Q ss_pred Cc
Q 039397 118 AS 119 (349)
Q Consensus 118 Ag 119 (349)
++
T Consensus 237 v~ 238 (339)
T COG1064 237 VG 238 (339)
T ss_pred CC
Confidence 76
|
|
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.03 Score=41.43 Aligned_cols=36 Identities=31% Similarity=0.532 Sum_probs=32.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEec
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKR-KANLVLVAR 79 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r 79 (349)
.++++|+++|.|+ |+.|+.+++.|.+. +.+|.+.+|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5688999999999 99999999999998 678888887
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.026 Score=51.87 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=36.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
+|++++|+|+++++|.++++.+...|++|+++.+++++.+.
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAA 179 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 57899999999999999999999999999999998776653
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.051 Score=53.15 Aligned_cols=73 Identities=19% Similarity=0.267 Sum_probs=50.6
Q ss_pred CCCCCCEEEEeCCC----------------chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--
Q 039397 43 ENMEDKVVIITGAS----------------SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas----------------~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-- 104 (349)
.+|+||+||||+|. |-.|.+||+++..+|++|.++.-... +. .. ..+..+..+
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-------~p-~~v~~i~V~ta 322 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-------DP-QGVKVIHVESA 322 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-------CC-CCceEEEecCH
Confidence 46999999999884 68999999999999999999974321 11 11 122333322
Q ss_pred -------cccCCCcceeeecCcCCCCcc
Q 039397 105 -------NKESKAVDHLVNTASLGHTFF 125 (349)
Q Consensus 105 -------~~~~g~iDvlVnnAg~~~~~~ 125 (349)
.+.. +.|++|.+|++....+
T Consensus 323 ~eM~~av~~~~-~~Di~I~aAAVaDyrp 349 (475)
T PRK13982 323 RQMLAAVEAAL-PADIAIFAAAVADWRV 349 (475)
T ss_pred HHHHHHHHhhC-CCCEEEEeccccceee
Confidence 1222 3699999999875543
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.12 Score=47.97 Aligned_cols=111 Identities=22% Similarity=0.159 Sum_probs=68.9
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCC----CCeEEEE-EeccccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNP----INEVTLV-SLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~-~~d~~~~g~iDvlVnnAg~~ 121 (349)
+++.|.|| |-+|..+|..++..|. +|++++++++.++....++.+. ....... ..|.+.....|++|..+|..
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii~~~~p 81 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVITAGVP 81 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEECCCCC
Confidence 47899999 9999999999999875 9999999988776544443211 1112222 24555677889999999874
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
... . ..-.+.+.-|+.-...+.+.+.+.. .++.+|+++
T Consensus 82 ~~~------~-~~r~~~~~~n~~i~~~i~~~i~~~~--~~~~viv~t 119 (307)
T PRK06223 82 RKP------G-MSRDDLLGINAKIMKDVAEGIKKYA--PDAIVIVVT 119 (307)
T ss_pred CCc------C-CCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEec
Confidence 321 1 1123444555544444444444332 235566664
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.019 Score=52.74 Aligned_cols=46 Identities=15% Similarity=0.281 Sum_probs=40.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
.-+++||.+.|.|.|+-+|+.+|..|.++|++|.++.|+...+++.
T Consensus 154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~ 199 (301)
T PRK14194 154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL 199 (301)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence 3489999999999999999999999999999999998876655443
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.031 Score=55.28 Aligned_cols=76 Identities=12% Similarity=0.018 Sum_probs=51.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEec-cccCCCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLN-NKESKAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d-~~~~g~iDvlVnnAg~~ 121 (349)
++++|+|+|.|+ |++|.++|+.|.++|++|.+++++... .......+...+ +.+...+ .......|.+|...|+.
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g--v~~~~~~~~~~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG--ATVRLGPGPTLPEDTDLVVTSPGWR 89 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC--CEEEECCCccccCCCCEEEECCCcC
Confidence 467899999997 789999999999999999999876532 222223332222 2222211 12234579999999986
Q ss_pred C
Q 039397 122 H 122 (349)
Q Consensus 122 ~ 122 (349)
.
T Consensus 90 ~ 90 (480)
T PRK01438 90 P 90 (480)
T ss_pred C
Confidence 4
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.031 Score=54.03 Aligned_cols=68 Identities=16% Similarity=0.237 Sum_probs=48.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
.+.||+++|.|. |.||+.+|+.+...|++|+++++++.+..+...+ +.. ....+ +.....|++|.+.|
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~----G~~--v~~l~-eal~~aDVVI~aTG 276 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD----GFR--VMTME-EAAELGDIFVTATG 276 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc----CCE--ecCHH-HHHhCCCEEEECCC
Confidence 478999999997 7899999999999999999999988765433221 111 11122 22346799987664
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.024 Score=49.84 Aligned_cols=42 Identities=17% Similarity=0.349 Sum_probs=37.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHH
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID 90 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~ 90 (349)
++.|.||+|.+|.++++.|++.|++|.+.+|++++.+....+
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 488999999999999999999999999999998887765543
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.032 Score=52.53 Aligned_cols=39 Identities=23% Similarity=0.369 Sum_probs=34.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
...+++++|+|.|+ ||+|..+|+.|++.|. ++.++|++.
T Consensus 19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 19 QRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 35678899999997 7899999999999997 899999874
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.023 Score=54.77 Aligned_cols=68 Identities=16% Similarity=0.252 Sum_probs=49.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
.+.|++|+|.|+ |.||+.+++.+...|++|+++++++.+++..... +. ..+.. .+.....|++|.+.|
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~----G~--~~~~~-~e~v~~aDVVI~atG 266 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAME----GY--EVMTM-EEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhc----CC--EEccH-HHHHcCCCEEEECCC
Confidence 468999999998 5899999999999999999999998776543321 11 11111 123346799998766
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.073 Score=49.20 Aligned_cols=107 Identities=17% Similarity=0.170 Sum_probs=74.8
Q ss_pred eCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCC----CCeEEEEEeccccCCCcceeeecCcCCCCccc
Q 039397 53 TGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNP----INEVTLVSLNNKESKAVDHLVNTASLGHTFFF 126 (349)
Q Consensus 53 TGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~ 126 (349)
.|+ |.+|..+|..|+.+|. +++++|++++.++..+.|+.+. ...+.....|.+.....|++|..||.....
T Consensus 2 IGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVitag~~rk~-- 78 (299)
T TIGR01771 2 IGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITAGAPQKP-- 78 (299)
T ss_pred CCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECCCCCCCC--
Confidence 454 9999999999998884 7999999998888888777432 123444445667788899999999975321
Q ss_pred cccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 127 EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 127 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
. .+-...++.|..-.....+.+..+ ..++.++++|-
T Consensus 79 ----g-~~R~dll~~N~~i~~~~~~~i~~~--~p~~~vivvsN 114 (299)
T TIGR01771 79 ----G-ETRLELVGRNVRIMKSIVPEVVKS--GFDGIFLVATN 114 (299)
T ss_pred ----C-CCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 1 122566777777666666665553 23477777774
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.02 Score=53.33 Aligned_cols=72 Identities=21% Similarity=0.298 Sum_probs=53.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
++.+++++|.|+ |.+|+.+++.|.+.| .+|++++|+.++.++.+.++.. ..+..+ .+.....|++|.+.+.
T Consensus 175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVi~at~~ 248 (311)
T cd05213 175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-----NAVPLDELLELLNEADVVISATGA 248 (311)
T ss_pred CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-----eEEeHHHHHHHHhcCCEEEECCCC
Confidence 378899999997 999999999999977 6899999998887777766521 122222 2223567999998875
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 249 ~ 249 (311)
T cd05213 249 P 249 (311)
T ss_pred C
Confidence 3
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.027 Score=51.33 Aligned_cols=44 Identities=23% Similarity=0.326 Sum_probs=39.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
-+++||.++|.|.|.-+|+-++..|.++|++|.++......+.+
T Consensus 160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~ 203 (287)
T PRK14176 160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK 203 (287)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH
Confidence 47899999999999999999999999999999999876655544
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.028 Score=49.75 Aligned_cols=37 Identities=30% Similarity=0.437 Sum_probs=34.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC---eEEEEecC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA---NLVLVARR 80 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~---~Vv~~~r~ 80 (349)
.++++++++|.|| ||.|+++++.|.+.|. +|++++|+
T Consensus 21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 4688999999998 9999999999999997 59999998
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.022 Score=54.53 Aligned_cols=72 Identities=21% Similarity=0.320 Sum_probs=58.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
++++|+++|.|| |-+|.-+|++|+++| .+|+++.|+.++.++++.++. ..++..+ .......|++|.+-|.
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----~~~~~l~el~~~l~~~DvVissTsa 248 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----AEAVALEELLEALAEADVVISSTSA 248 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----CeeecHHHHHHhhhhCCEEEEecCC
Confidence 489999999998 779999999999999 689999999999998888874 2333333 4556778999988765
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 249 ~ 249 (414)
T COG0373 249 P 249 (414)
T ss_pred C
Confidence 3
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.039 Score=51.93 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=47.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEE-ec----cccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVS-LN----NKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~-~d----~~~~g~iDvlVnnAg 119 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++... ++. ...+.... .+ ....|.+|+++.++|
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lG--a~~vi~~~~~~~~~~~~~~g~~D~vid~~G 244 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMG--ADKLVNPQNDDLDHYKAEKGYFDVSFEVSG 244 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcC--CcEEecCCcccHHHHhccCCCCCEEEECCC
Confidence 6899999986 8999999988888998 6889999988776433 331 11111000 00 122346899998887
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.036 Score=50.49 Aligned_cols=44 Identities=23% Similarity=0.237 Sum_probs=38.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
-+++||.|+|.|.|.-+|+-+|..|.++|++|.++......+.+
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~ 196 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSF 196 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHH
Confidence 48899999999999999999999999999999998766555543
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.025 Score=53.18 Aligned_cols=69 Identities=19% Similarity=0.164 Sum_probs=44.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCe---EEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKAN---LVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~---Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
++|+|.||||.+|+++++.|.++|+. +..+.++.+..+... + .+.+..+...+......+|++|.++|.
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~--~g~~i~v~d~~~~~~~~vDvVf~A~g~ 73 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--F--KGKELKVEDLTTFDFSGVDIALFSAGG 73 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--e--CCceeEEeeCCHHHHcCCCEEEECCCh
Confidence 47999999999999999999998875 466666544333221 1 122233322332333578888887764
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.035 Score=52.39 Aligned_cols=71 Identities=20% Similarity=0.199 Sum_probs=49.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------ccc--CCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKE--SKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~--~g~iDvlVn 116 (349)
+|+.+||.||+||+|.+..+-....|+..+++.++.+.++-.. .+ + ....++-+ ... .+++|+++-
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~l--G--Ad~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KL--G--ADEVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-Hc--C--CcEeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 5789999999999999999999999966666666666654322 22 1 11222222 111 668999999
Q ss_pred cCcCC
Q 039397 117 TASLG 121 (349)
Q Consensus 117 nAg~~ 121 (349)
|.|..
T Consensus 232 ~vg~~ 236 (347)
T KOG1198|consen 232 CVGGS 236 (347)
T ss_pred CCCCC
Confidence 99863
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.04 Score=50.68 Aligned_cols=42 Identities=21% Similarity=0.226 Sum_probs=37.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
++++++|+|+++++|.++++.+...|++|+.++++.++.+.+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~ 185 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL 185 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 568999999999999999999999999999999987766554
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.019 Score=55.20 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=34.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
+.|+|||||++.++|..+++.|.+.|++|++++.+...
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 45899999999999999999999999999999988644
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.039 Score=52.72 Aligned_cols=74 Identities=16% Similarity=0.139 Sum_probs=48.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEeccccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEY--NPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
..++|.|.||||.+|+++.+.|.++ +.+|..+.++....+....... ...........+......+|+++.+.+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp 113 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLP 113 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCC
Confidence 3458999999999999999999999 7899998886554433222110 001111122333333457899998765
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.045 Score=43.31 Aligned_cols=71 Identities=17% Similarity=0.157 Sum_probs=46.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHc-CCeEEE-EecCcchhhhHHHHh--cCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKR-KANLVL-VARRENRLQGSTIDE--YNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~-G~~Vv~-~~r~~~~l~~~~~~~--~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
+|.|.||+|-+|.++.+.|.++ .++++. ++++.+......... .....+..+...|.+....+|+++.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCc
Confidence 5889999999999999999996 345544 455542333333222 1223345555567777899999999865
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.073 Score=47.12 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=32.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEE-EEec
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLV-LVAR 79 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv-~~~r 79 (349)
.++++++++|-| .|.+|+.+++.|.+.|++|+ +.+.
T Consensus 27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 678899999998 69999999999999999999 5554
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.023 Score=53.31 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=38.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI 89 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~ 89 (349)
.|++++|+||+|++|..+++.+...|++|+.+.+++++.+.+..
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~ 194 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN 194 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 58999999999999999999888899999999998877665543
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.055 Score=49.54 Aligned_cols=70 Identities=26% Similarity=0.250 Sum_probs=49.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
.|.+++|+|+++++|.++++.+...|++|+.+++++++.+.+.. +. .... +...+....+++|+++++.|
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g--~~~~-~~~~~~~~~~~~d~vl~~~g 201 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LG--AAEV-VVGGSELSGAPVDLVVDSVG 201 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC--CcEE-EeccccccCCCceEEEECCC
Confidence 48999999999999999999999999999999998777655432 31 1111 11111111246888888765
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.03 Score=54.61 Aligned_cols=65 Identities=12% Similarity=0.173 Sum_probs=46.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-cccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-NKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~~~g~iDvlVnnAg 119 (349)
++.|.||+|++|.++|+.|.+.|++|++++|+++...+.+.+. + +. ...+ .+.....|++|.+..
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~---g--v~-~~~~~~e~~~~aDvVIlavp 67 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL---G--VE-YANDNIDAAKDADIVIISVP 67 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc---C--Ce-eccCHHHHhccCCEEEEecC
Confidence 5899999999999999999999999999999977654444332 1 11 1122 223345688887653
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.037 Score=50.82 Aligned_cols=38 Identities=16% Similarity=0.293 Sum_probs=35.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRE 81 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~ 81 (349)
+++||+|+|.|-|+-+|+.+|..|.++|++|.++. |+.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 78999999999999999999999999999999995 654
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.038 Score=50.41 Aligned_cols=44 Identities=14% Similarity=0.251 Sum_probs=38.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
-+++||+|+|.|.|.-+|+-++..|.++|++|.++.++...+.+
T Consensus 154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~ 197 (285)
T PRK14189 154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAA 197 (285)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHH
Confidence 47899999999999999999999999999999998776555543
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.047 Score=45.36 Aligned_cols=71 Identities=17% Similarity=0.244 Sum_probs=43.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
...+.||+++|.|= |.+|+.+|+.|...|++|+++..++-+.-+...+ ....... .+....-|++|.+.|-
T Consensus 18 ~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~d------Gf~v~~~-~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 18 NLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMD------GFEVMTL-EEALRDADIFVTATGN 88 (162)
T ss_dssp -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHT------T-EEE-H-HHHTTT-SEEEE-SSS
T ss_pred ceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhc------CcEecCH-HHHHhhCCEEEECCCC
Confidence 45689999999995 8999999999999999999999987554433221 1122222 2234456777776664
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.28 Score=45.52 Aligned_cols=113 Identities=23% Similarity=0.171 Sum_probs=74.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCC----CCeEEE-EEeccccCCCcceeeecCcCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNP----INEVTL-VSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~-~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
++.|.|+ |-+|..+|..++.+|. +|++++++++..+....++... ...... ...|.++....|++|..||...
T Consensus 3 KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~~~~aDiVIitag~p~ 81 (305)
T TIGR01763 3 KISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYADTANSDIVVITAGLPR 81 (305)
T ss_pred EEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHHhCCCCEEEEcCCCCC
Confidence 5788897 8899999999999886 8999999766444332222111 111122 2355555778899999999743
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
.. + +.-.+.+..|+.-....++.+.++. .++.||++|-..
T Consensus 82 ~~------~-~sR~~l~~~N~~iv~~i~~~I~~~~--p~~~iIv~tNP~ 121 (305)
T TIGR01763 82 KP------G-MSREDLLSMNAGIVREVTGRIMEHS--PNPIIVVVSNPL 121 (305)
T ss_pred Cc------C-CCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEecCcH
Confidence 21 1 1224577778877777777777663 346777776543
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.044 Score=50.88 Aligned_cols=43 Identities=14% Similarity=0.185 Sum_probs=37.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
.+++++|.|+++++|.++++.+.+.|++|+.+.++.++.+...
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV 187 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 5789999999999999999999999999999998877655443
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.067 Score=47.29 Aligned_cols=67 Identities=25% Similarity=0.360 Sum_probs=47.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------ccCCCcceeeecCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------KESKAVDHLVNTAS 119 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------~~~g~iDvlVnnAg 119 (349)
+.++|.|+ |-+|..+|+.|.++|++|++++++++..++...+ ......+..|. ......|++|..-|
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence 35677776 7789999999999999999999999987764432 12455566661 22345677776554
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.052 Score=47.14 Aligned_cols=39 Identities=23% Similarity=0.360 Sum_probs=34.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
...+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus 16 q~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ 55 (202)
T TIGR02356 16 QQRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDH 55 (202)
T ss_pred HHHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 35678899999995 8999999999999997 899999873
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.039 Score=48.57 Aligned_cols=72 Identities=8% Similarity=0.082 Sum_probs=53.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----cccCCCcceeeecCc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----NKESKAVDHLVNTAS 119 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~iDvlVnnAg 119 (349)
+.|+++|=.|++|| -+++.+|++|++|..+|-+++.++.........+..+.+.... ....++.|++++.-=
T Consensus 58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~~~~FDvV~cmEV 133 (243)
T COG2227 58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASAGGQFDVVTCMEV 133 (243)
T ss_pred CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhcCCCccEEEEhhH
Confidence 78999999999999 6999999999999999999988886665443333333333333 233378999998643
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.048 Score=49.60 Aligned_cols=47 Identities=17% Similarity=0.289 Sum_probs=40.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
.-+++||.|+|.|-|.-+|+-++..|.++|++|.++......+++..
T Consensus 154 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~ 200 (284)
T PRK14177 154 GIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIV 200 (284)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence 34899999999999999999999999999999999987766665433
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.049 Score=49.66 Aligned_cols=45 Identities=20% Similarity=0.319 Sum_probs=39.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.|+|.|.|.-+|+-++..|.++|++|.++.+....+++.
T Consensus 151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~ 195 (287)
T PRK14173 151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV 195 (287)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 478999999999999999999999999999999988776655543
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.051 Score=49.34 Aligned_cols=46 Identities=20% Similarity=0.343 Sum_probs=40.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
-+++||.|+|.|-|.-+|+-++..|.++|++|.++.++...+.+..
T Consensus 154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~ 199 (278)
T PRK14172 154 IDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVC 199 (278)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence 3899999999999999999999999999999999987666655433
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.074 Score=50.07 Aligned_cols=39 Identities=23% Similarity=0.377 Sum_probs=34.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
...+++++|+|.|+ ||+|..+|+.|++.|. ++.++|.+.
T Consensus 19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 34678889999998 8999999999999998 999999874
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.018 Score=44.23 Aligned_cols=38 Identities=13% Similarity=0.245 Sum_probs=33.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
.+++||.++|.|| |.+|..-++.|.+.|++|.+++.+.
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 3789999999998 8999999999999999999999986
|
|
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.24 E-value=1.1 Score=40.05 Aligned_cols=94 Identities=10% Similarity=0.114 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCC
Q 039397 16 SLVMMAFAWPALCFVNGCEWLYNNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI 95 (349)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~ 95 (349)
...+|+-.+-.|.+.+.+... -.|.+|||--|+||+|..+++.+-..|++++.+..+.++.+...++ +.
T Consensus 124 aaa~llq~lTAy~ll~e~y~v--------kpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken---G~ 192 (336)
T KOG1197|consen 124 AAALLLQGLTAYMLLFEAYNV--------KPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN---GA 192 (336)
T ss_pred HHHHHHHHHHHHHHHHHhcCC--------CCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc---CC
Confidence 334444455555555543311 1478999999999999999999999999999999988887655443 11
Q ss_pred Ce-EEEEEec-------cccCCCcceeeecCcC
Q 039397 96 NE-VTLVSLN-------NKESKAVDHLVNTASL 120 (349)
Q Consensus 96 ~~-~~~~~~d-------~~~~g~iDvlVnnAg~ 120 (349)
.. +..-..| .....++|++.-..|.
T Consensus 193 ~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~ 225 (336)
T KOG1197|consen 193 EHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGK 225 (336)
T ss_pred cceeeccchhHHHHHHhccCCCCceeeeccccc
Confidence 11 1111122 3344578888877774
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.29 Score=45.24 Aligned_cols=71 Identities=23% Similarity=0.293 Sum_probs=49.6
Q ss_pred EEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcC----CCCeEEEE-EeccccCCCcceeeecCcCC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYN----PINEVTLV-SLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~~-~~d~~~~g~iDvlVnnAg~~ 121 (349)
|.|.|| |.+|..+|..++.+|. +|+++|++++.++....++.. ........ ..|.+.....|++|.++|..
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~~~l~dADiVIit~g~p 77 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDYEDIAGSDVVVITAGIP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCHHHhCCCCEEEEecCCC
Confidence 468898 8899999999999886 999999998765443333311 11112222 24556677889999999974
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.066 Score=50.59 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=44.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC---cchhhhHHHHhcCCCCeEEEE-Eec---cccCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR---ENRLQGSTIDEYNPINEVTLV-SLN---NKESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~---~~~l~~~~~~~~~~~~~~~~~-~~d---~~~~g~iDvlVnnA 118 (349)
.|++|+|+|+ |++|...++.+...|++|++++|+ +++++ ...++ +.+.... ..+ ....+.+|++|.+.
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~---Ga~~v~~~~~~~~~~~~~~~~d~vid~~ 246 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL---GATYVNSSKTPVAEVKLVGEFDLIIEAT 246 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc---CCEEecCCccchhhhhhcCCCCEEEECc
Confidence 6889999986 999999998888899999999984 44443 22232 1111100 001 11234688888888
Q ss_pred c
Q 039397 119 S 119 (349)
Q Consensus 119 g 119 (349)
|
T Consensus 247 g 247 (355)
T cd08230 247 G 247 (355)
T ss_pred C
Confidence 7
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.037 Score=49.87 Aligned_cols=67 Identities=16% Similarity=0.216 Sum_probs=45.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec------cccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN------NKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------~~~~g~iDvlVnnAg 119 (349)
+++|+|||+- |+.+++.|.++|++|+++.+++...+..... +...+..-..| .-...++|++|+.+.
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~---g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH---QALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc---CCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 6999999998 9999999999999999999988654433221 11122222222 112346888888654
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.06 Score=49.00 Aligned_cols=45 Identities=20% Similarity=0.281 Sum_probs=39.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.++|.|.|.-+|+-++..|.++|++|.++.+....+.+.
T Consensus 154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~ 198 (282)
T PRK14180 154 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH 198 (282)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHH
Confidence 478999999999999999999999999999999998766655543
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.034 Score=50.51 Aligned_cols=101 Identities=13% Similarity=0.167 Sum_probs=67.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec------cccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN------NKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------~~~~g~iDvlVnnAg 119 (349)
+|+|++|+||+|..|.-..+----+|++|+.++-.+++.+-+.+++... ..+..-..| .+...+||+.+-|.|
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyfeNVG 228 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYFENVG 228 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEEEcCC
Confidence 4999999999999998665555558999999999999887766654211 111111122 344568999999998
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP 175 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~ 175 (349)
. +-++. +++.| +..+||+.++-++.+..
T Consensus 229 g------------~v~DA---------------v~~~l-n~~aRi~~CG~IS~YN~ 256 (340)
T COG2130 229 G------------EVLDA---------------VLPLL-NLFARIPVCGAISQYNA 256 (340)
T ss_pred c------------hHHHH---------------HHHhh-ccccceeeeeehhhcCC
Confidence 4 22232 33344 24578988877776643
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.057 Score=49.05 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=38.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
-+++||.++|.|.|.-+|+-++..|.++|++|.++......+.+
T Consensus 153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~ 196 (281)
T PRK14183 153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKA 196 (281)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 38999999999999999999999999999999988765555543
|
|
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.085 Score=46.04 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=37.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGST 88 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~ 88 (349)
-+++||.|+|.|| |..|..=++.|++.|++|++++... +++....
T Consensus 8 ~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~ 53 (210)
T COG1648 8 LDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALI 53 (210)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHH
Confidence 3789999999997 7788999999999999999998876 3444333
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.069 Score=48.69 Aligned_cols=45 Identities=16% Similarity=0.278 Sum_probs=39.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.++|.|.|.-+|+-++..|.++|++|.++......+++.
T Consensus 154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~ 198 (284)
T PRK14190 154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAEL 198 (284)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHH
Confidence 379999999999999999999999999999999997766555543
|
|
| >PTZ00079 NADP-specific glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.15 Score=49.49 Aligned_cols=38 Identities=13% Similarity=0.368 Sum_probs=33.9
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEE-EEecC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLV-LVARR 80 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv-~~~r~ 80 (349)
..+++||+|+|.|. |-+|...|+.|.+.|++|+ +.|.+
T Consensus 232 ~~~l~Gk~VaVqG~-GnVg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 232 NDSLEGKTVVVSGS-GNVAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred CCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 56899999999997 9999999999999999999 55554
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.19 Score=45.59 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=33.5
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRE 81 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~ 81 (349)
...+++++|+|.|+ ||+|.++|+.|++.| -++.++|.+.
T Consensus 25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~ 64 (268)
T PRK15116 25 LQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDD 64 (268)
T ss_pred HHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence 35678889999986 799999999999999 6899988763
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.076 Score=52.42 Aligned_cols=74 Identities=14% Similarity=0.116 Sum_probs=51.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe--ccccCCCcceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL--NNKESKAVDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~--d~~~~g~iDvlVnnAg~ 120 (349)
..+.+|.++|-| .||.|+++|+.|.++|++|.+.+++.....+...+ . .+..... +.+.....|.+|...|+
T Consensus 11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~---~--gi~~~~~~~~~~~~~~~d~vV~Spgi 84 (473)
T PRK00141 11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEV---T--GVADISTAEASDQLDSFSLVVTSPGW 84 (473)
T ss_pred ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHh---c--CcEEEeCCCchhHhcCCCEEEeCCCC
Confidence 356778899999 68899999999999999999999875543221111 1 2222222 12234468999999998
Q ss_pred CC
Q 039397 121 GH 122 (349)
Q Consensus 121 ~~ 122 (349)
..
T Consensus 85 ~~ 86 (473)
T PRK00141 85 RP 86 (473)
T ss_pred CC
Confidence 64
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.057 Score=52.66 Aligned_cols=69 Identities=17% Similarity=0.205 Sum_probs=48.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
..+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+...... . + ......+ +.....|++|.+.|
T Consensus 250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~---~-G--~~~~~le-ell~~ADIVI~atG 318 (476)
T PTZ00075 250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICALQAAM---E-G--YQVVTLE-DVVETADIFVTATG 318 (476)
T ss_pred CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh---c-C--ceeccHH-HHHhcCCEEEECCC
Confidence 47899999999986 59999999999999999999988665432211 1 1 1222222 22346799988765
|
|
| >PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.19 Score=49.89 Aligned_cols=123 Identities=17% Similarity=0.184 Sum_probs=70.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe--ccccCCCcceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL--NNKESKAVDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~--d~~~~g~iDvlVnnAg~ 120 (349)
+++++|.++|.|. ||.|.++|+.|.++|++|.+.|.+.... ....+...+..+..... +.+.....|.+|...|+
T Consensus 3 ~~~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~~--~~~~L~~~~~~~~~~~g~~~~~~~~~~d~vv~sp~I 79 (498)
T PRK02006 3 GDLQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAPP--NLAALRAELPDAEFVGGPFDPALLDGVDLVALSPGL 79 (498)
T ss_pred cccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCch--hHHHHHhhcCCcEEEeCCCchhHhcCCCEEEECCCC
Confidence 3467889999995 6799999999999999999999765321 11122111112222222 12223467999999997
Q ss_pred CCCccccccCCcchHHH--HHHhHhhhhHHHHHHhccccccC--CCeEEEEecccc
Q 039397 121 GHTFFFEEVTDTSIFPR--LLDINFWGNVYPTFVALPYLHES--NGRVVVNASVEN 172 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~--~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~ 172 (349)
.... .+ ....+.+ ...+++.+-..+....+..+... ...+|.|+...|
T Consensus 80 ~~~~--~~--~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnG 131 (498)
T PRK02006 80 SPLE--AA--LAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNG 131 (498)
T ss_pred CCcc--cc--cCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCc
Confidence 5321 00 0012222 23566676666665555433111 126777776665
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.33 Score=42.55 Aligned_cols=195 Identities=14% Similarity=-0.007 Sum_probs=115.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVN 116 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVn 116 (349)
+++-...++-|+.+..|.++++.-...|+.|.++.|++.+ .+ +......+.+...+. ....++..++-
T Consensus 49 dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~---l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e 123 (283)
T KOG4288|consen 49 DVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QT---LSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYE 123 (283)
T ss_pred hhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--ch---hhCCCcccchhhccccccCcchhhhcCCcccHH
Confidence 4444678999999999999999999999999999998763 11 122223344333331 11223333333
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESL 196 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~l 196 (349)
++|.. .....+-.+|=.......+++... +..+.++||--..-.+.---..|--+|-+.+.-....
T Consensus 124 ~~ggf-----------gn~~~m~~ing~ani~a~kaa~~~---gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~ 189 (283)
T KOG4288|consen 124 MMGGF-----------GNIILMDRINGTANINAVKAAAKA---GVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKK 189 (283)
T ss_pred HhcCc-----------cchHHHHHhccHhhHHHHHHHHHc---CCceEEEEEhhhcCCCCccchhhhccchHHHHHHHHh
Confidence 43321 223566677777788888888653 3358999987665333322346888998876544433
Q ss_pred HHHhcCCeeEEEEecCcccCCCCCCccc---cccchhhhh--HHH----------HhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 197 RFELNDEVGITIATHGWIGIEMTKGKFM---LEDGAEMQW--KEE----------REVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 197 a~el~~~I~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~--~~~----------~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
. + .|=..+.||++.....-.... ...+...+. ... .......++.|+||.+++.+++++.
T Consensus 190 ~---~--~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~ 264 (283)
T KOG4288|consen 190 F---R--FRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD 264 (283)
T ss_pred c---C--CCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCC
Confidence 2 1 455778999986442111100 000111110 000 1122345667999999999999875
Q ss_pred c
Q 039397 262 T 262 (349)
Q Consensus 262 ~ 262 (349)
.
T Consensus 265 f 265 (283)
T KOG4288|consen 265 F 265 (283)
T ss_pred c
Confidence 4
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.067 Score=49.05 Aligned_cols=45 Identities=18% Similarity=0.289 Sum_probs=39.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.|+|.|-|.-+|+-++..|.++|++|.++......+++.
T Consensus 154 i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~ 198 (297)
T PRK14186 154 IDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASI 198 (297)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 488999999999999999999999999999999997766555543
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.068 Score=48.64 Aligned_cols=46 Identities=20% Similarity=0.330 Sum_probs=40.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
.-+++||.|+|.|.|.=+|+-++..|.++|++|.++......+++.
T Consensus 152 ~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~ 197 (284)
T PRK14170 152 GTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQV 197 (284)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 3479999999999999999999999999999999987766555543
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.075 Score=48.36 Aligned_cols=45 Identities=20% Similarity=0.302 Sum_probs=39.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.++|.|.|.-+|+-++..|.++|++|.++......+++.
T Consensus 152 i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~ 196 (282)
T PRK14169 152 IDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQL 196 (282)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence 478999999999999999999999999999999997665555543
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.062 Score=48.98 Aligned_cols=41 Identities=22% Similarity=0.368 Sum_probs=36.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
.-+++||.++|.|.|+-+|+-+|..|.++|++|.++....+
T Consensus 153 ~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~ 193 (284)
T PRK14179 153 NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR 193 (284)
T ss_pred CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC
Confidence 34799999999999999999999999999999999844333
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.075 Score=48.36 Aligned_cols=46 Identities=24% Similarity=0.261 Sum_probs=40.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
-+++||.++|.|-|.-+|+-++..|.++|++|.++.+....+++..
T Consensus 153 i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~ 198 (282)
T PRK14166 153 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYT 198 (282)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence 3789999999999999999999999999999999987766665433
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.15 Score=42.37 Aligned_cols=36 Identities=28% Similarity=0.335 Sum_probs=32.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR 79 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r 79 (349)
.+++||.++|.|| |-+|...++.|.+.|++|.+++.
T Consensus 9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence 4789999999997 78999999999999999999953
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.072 Score=48.60 Aligned_cols=45 Identities=20% Similarity=0.350 Sum_probs=39.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.++|.|-|.-+|+-++..|.++|++|.++......+.+.
T Consensus 155 i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~ 199 (288)
T PRK14171 155 PNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSI 199 (288)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 379999999999999999999999999999999988666555543
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.075 Score=45.14 Aligned_cols=75 Identities=21% Similarity=0.203 Sum_probs=50.1
Q ss_pred hccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeec
Q 039397 38 NNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNT 117 (349)
Q Consensus 38 ~~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnn 117 (349)
......++.||++.|.|. |.||+++|+.+..-|++|+..+|+.......... ....... .+.....|+++++
T Consensus 27 ~~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~------~~~~~~l-~ell~~aDiv~~~ 98 (178)
T PF02826_consen 27 ERFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEF------GVEYVSL-DELLAQADIVSLH 98 (178)
T ss_dssp TTTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHT------TEEESSH-HHHHHH-SEEEE-
T ss_pred cCCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccc------cceeeeh-hhhcchhhhhhhh
Confidence 344556899999999986 9999999999999999999999998765411111 1211111 2334567999988
Q ss_pred CcC
Q 039397 118 ASL 120 (349)
Q Consensus 118 Ag~ 120 (349)
.-.
T Consensus 99 ~pl 101 (178)
T PF02826_consen 99 LPL 101 (178)
T ss_dssp SSS
T ss_pred hcc
Confidence 764
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.09 Score=48.55 Aligned_cols=42 Identities=19% Similarity=0.166 Sum_probs=37.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
.+.+++|+|+++++|.++++.+...|++|+.++++.++.+.+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~ 183 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV 183 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 478999999999999999999999999999999988776544
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.31 Score=41.45 Aligned_cols=121 Identities=19% Similarity=0.260 Sum_probs=87.0
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-CCCcceeeecC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-SKAVDHLVNTA 118 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~g~iDvlVnnA 118 (349)
+..+++||+|+=-|++.|+ ++...+-.| ++|+.++.+++.++...+......+++.++.+|..+ .+++|.+|-|.
T Consensus 40 ~~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~~~~dtvimNP 116 (198)
T COG2263 40 LRGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFRGKFDTVIMNP 116 (198)
T ss_pred HcCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcCCccceEEECC
Confidence 5678999999999998775 444445568 589999999999888877776677789999999665 57899999998
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRF 198 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~ 198 (349)
-.+..... .|..-.++.+++. ...|+.-|++-..|.+..+.
T Consensus 117 PFG~~~rh---aDr~Fl~~Ale~s------------------------------------~vVYsiH~a~~~~f~~~~~~ 157 (198)
T COG2263 117 PFGSQRRH---ADRPFLLKALEIS------------------------------------DVVYSIHKAGSRDFVEKFAA 157 (198)
T ss_pred CCcccccc---CCHHHHHHHHHhh------------------------------------heEEEeeccccHHHHHHHHH
Confidence 65543221 2323333333322 34466667778888888888
Q ss_pred HhcCC
Q 039397 199 ELNDE 203 (349)
Q Consensus 199 el~~~ 203 (349)
+++..
T Consensus 158 ~~G~~ 162 (198)
T COG2263 158 DLGGT 162 (198)
T ss_pred hcCCe
Confidence 88754
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.06 Score=51.47 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=32.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARR 80 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~ 80 (349)
..+++++|+|.|+ ||+|..+++.|+..|. ++.++|++
T Consensus 131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3577888999976 8999999999999997 79999987
|
|
| >PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.11 Score=51.20 Aligned_cols=74 Identities=14% Similarity=0.069 Sum_probs=49.7
Q ss_pred CCCCCEEEEeCCCchHHHH-HHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCC
Q 039397 44 NMEDKVVIITGASSDIGEQ-IAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~a-la~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
..++|+++|.|.+ |.|.+ +|+.|.++|++|.+.|.+.... ..++...+-.... ..+.+.....|.+|.+.|+..
T Consensus 4 ~~~~~~v~viG~G-~sG~s~~a~~L~~~G~~V~~~D~~~~~~---~~~l~~~gi~~~~-~~~~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 4 LRRIKRIHFVGIG-GIGMSGLAEVLLNLGYKVSGSDLKESAV---TQRLLELGAIIFI-GHDAENIKDADVVVYSSAIPD 78 (461)
T ss_pred cCCCCEEEEEEEc-hhhHHHHHHHHHhCCCeEEEECCCCChH---HHHHHHCCCEEeC-CCCHHHCCCCCEEEECCCCCC
Confidence 4567889999985 79999 7999999999999999875431 1123222211211 112233446899999999864
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.1 Score=48.26 Aligned_cols=43 Identities=21% Similarity=0.293 Sum_probs=37.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
.|.+++|.|+++++|.++++.....|++|+++.++.++.+.+.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~ 181 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR 181 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH
Confidence 5789999999999999999999999999999998877765543
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.061 Score=45.80 Aligned_cols=39 Identities=26% Similarity=0.379 Sum_probs=32.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
+|.|.|| |-+|+.+|..++..|++|.+.+++++.++...
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence 4678888 99999999999999999999999988776543
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.1 Score=48.35 Aligned_cols=42 Identities=10% Similarity=0.106 Sum_probs=36.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
+|++++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL 180 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence 578999999999999999999999999999999887765544
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.08 Score=48.11 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=40.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
-+++||.++|.|-|.-.|+.++..|..+|++|.++.++...+++..
T Consensus 148 i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~ 193 (279)
T PRK14178 148 ISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAEL 193 (279)
T ss_pred CCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHH
Confidence 4799999999999999999999999999999999998876655433
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.4 Score=42.17 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=49.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc---cCCCcceeeecCcCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK---ESKAVDHLVNTASLG 121 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~---~~g~iDvlVnnAg~~ 121 (349)
.+.++|-.|++.|. ++..+++.|+ +|+.++.++..++.....+...+..+.++..|.. ..++.|+++.|....
T Consensus 36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~~~~~~fD~Vi~npPy~ 112 (223)
T PRK14967 36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARAVEFRPFDVVVSNPPYV 112 (223)
T ss_pred CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhhccCCCeeEEEECCCCC
Confidence 35789999987654 3445566676 9999999988777655554322234566666632 235799999997653
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.072 Score=42.85 Aligned_cols=42 Identities=10% Similarity=0.197 Sum_probs=35.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI 89 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~ 89 (349)
+++++++.|.+ -|.++|+.|++.|++|+++|.++...+....
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~ 57 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK 57 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 56789999987 7888899999999999999999987665443
|
|
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.12 Score=47.28 Aligned_cols=42 Identities=19% Similarity=0.246 Sum_probs=37.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
+|++++|+|+++++|.++++.+...|++|+.++++.++.+..
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA 180 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence 578999999999999999999999999999999987665544
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.085 Score=48.27 Aligned_cols=45 Identities=16% Similarity=0.238 Sum_probs=40.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.++|.|.|.-+|+-++..|.++|++|.++......+.+.
T Consensus 156 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~ 200 (294)
T PRK14187 156 RNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADY 200 (294)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHH
Confidence 478999999999999999999999999999999998776665543
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.24 Score=43.96 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=31.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
.+++++|+|.|. ||+|.++++.|++.|. +++++|.+.
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 467788999987 7999999999999996 899888763
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.13 Score=48.18 Aligned_cols=40 Identities=10% Similarity=-0.029 Sum_probs=34.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
.|++++|+|+ +++|...++.....|++|+++++++++++.
T Consensus 165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~ 204 (329)
T TIGR02822 165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRL 204 (329)
T ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 4889999997 899998888777789999999999887653
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.089 Score=48.27 Aligned_cols=46 Identities=17% Similarity=0.245 Sum_probs=40.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
-+++||.|+|.|-|.=+|+=++..|.++|++|.++......+++..
T Consensus 163 i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~ 208 (299)
T PLN02516 163 IPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIV 208 (299)
T ss_pred CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence 4899999999999999999999999999999999987666555433
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.11 Score=49.62 Aligned_cols=71 Identities=17% Similarity=0.118 Sum_probs=48.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
..++.||++.|.|. |.||+.+|+.|..-|++|+..+|+....+.. .+. .+.....-.+.....|+++.+.-
T Consensus 194 ~~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~-~~~-----g~~~~~~l~ell~~sDvV~l~lP 264 (386)
T PLN03139 194 AYDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELE-KET-----GAKFEEDLDAMLPKCDVVVINTP 264 (386)
T ss_pred CcCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhH-hhc-----CceecCCHHHHHhhCCEEEEeCC
Confidence 35799999999995 7899999999999999999999875322211 111 11111111233456899998764
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.069 Score=52.00 Aligned_cols=68 Identities=18% Similarity=0.234 Sum_probs=47.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
.+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+......+ +.. .+..+ +.....|++|.+.|
T Consensus 251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~----G~~--vv~le-Eal~~ADVVI~tTG 318 (477)
T PLN02494 251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICALQALME----GYQ--VLTLE-DVVSEADIFVTTTG 318 (477)
T ss_pred ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhc----CCe--eccHH-HHHhhCCEEEECCC
Confidence 4689999999985 999999999999999999999987654332211 111 11221 22345688887555
|
|
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.084 Score=49.64 Aligned_cols=68 Identities=21% Similarity=0.271 Sum_probs=45.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAK-RK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~-~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
.|++++|+|+ |+||...++.+.+ .| .+|+++++++++++.... . + ...... +..+..++|++|.++|.
T Consensus 163 ~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~-~---~-~~~~~~-~~~~~~g~d~viD~~G~ 232 (341)
T cd08237 163 DRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF-A---D-ETYLID-DIPEDLAVDHAFECVGG 232 (341)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh-c---C-ceeehh-hhhhccCCcEEEECCCC
Confidence 5889999996 9999999888876 44 689999999877665432 1 1 111111 11122258999998883
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.096 Score=51.49 Aligned_cols=76 Identities=14% Similarity=0.066 Sum_probs=49.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchh-hhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL-QGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l-~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
.+.+|+++|.|. |+.|.++|+.|.+.|++|.+.|++.... .....++...+ +.+...+ .+.....|.+|+..|+
T Consensus 11 ~~~~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~g--i~~~~~~~~~~~~~~~dlVV~Spgi 87 (458)
T PRK01710 11 FIKNKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELG--VKLVLGENYLDKLDGFDVIFKTPSM 87 (458)
T ss_pred hhcCCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCC--CEEEeCCCChHHhccCCEEEECCCC
Confidence 355788999886 6689999999999999999999875422 12112232222 2222222 2334568999999998
Q ss_pred CC
Q 039397 121 GH 122 (349)
Q Consensus 121 ~~ 122 (349)
..
T Consensus 88 ~~ 89 (458)
T PRK01710 88 RI 89 (458)
T ss_pred CC
Confidence 64
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.1 Score=46.76 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=34.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
...+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 35678899999998 9999999999999996 888888764
|
|
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.14 Score=47.43 Aligned_cols=69 Identities=22% Similarity=0.250 Sum_probs=47.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
+|.+++|.| ++++|.++++.+...|++|+++++++++.+.+.. + +........ +....+.+|+++++.|
T Consensus 155 ~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~-~--g~~~~~~~~-~~~~~~~~d~vid~~g 223 (319)
T cd08242 155 PGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARR-L--GVETVLPDE-AESEGGGFDVVVEATG 223 (319)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-c--CCcEEeCcc-ccccCCCCCEEEECCC
Confidence 578999997 6999999999999999999999988777654433 2 111111111 1123346899998876
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.14 Score=48.53 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=45.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----cccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----NKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~iDvlVnnAg 119 (349)
.|++|+|.|+ |++|..+++.+...|++|++++.+.++..+...++. . +..+...+ .+..+.+|++|.+.|
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~G--a-~~vi~~~~~~~~~~~~~~~D~vid~~g 256 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLG--A-DSFLVSTDPEKMKAAIGTMDYIIDTVS 256 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCC--C-cEEEcCCCHHHHHhhcCCCCEEEECCC
Confidence 5889999775 899999999988999999998887766544433321 1 11110000 111235788888777
|
|
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.1 Score=47.40 Aligned_cols=45 Identities=22% Similarity=0.384 Sum_probs=39.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.++|.|-|.-+|+-++..|.++|++|.++......+++.
T Consensus 153 i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~ 197 (282)
T PRK14182 153 VDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGE 197 (282)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 378999999999999999999999999999999998776655543
|
|
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.051 Score=50.61 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=37.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
.+.+++|.|+++.+|.++++.+...|++|+.++++.++.+..
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~ 203 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV 203 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 478999999999999999999999999999999987776544
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.32 Score=42.77 Aligned_cols=38 Identities=18% Similarity=0.328 Sum_probs=32.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRE 81 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~ 81 (349)
.+++|++++|-| .|.+|+++|+.|.++|++|+.+ +.+.
T Consensus 19 ~~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 19 DSLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 578999999999 5999999999999999976654 5444
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.13 Score=50.99 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=50.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTAS 119 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg 119 (349)
..-+.||+++|.|. |..|.+.++.|.++|++|++.|++.+..+. +...+ +..+..+ .+.....|++|.+.|
T Consensus 7 ~~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~----l~~~g--~~~~~~~~~~~~l~~~D~VV~SpG 79 (488)
T PRK03369 7 DPLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRP----HAERG--VATVSTSDAVQQIADYALVVTSPG 79 (488)
T ss_pred ccccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH----HHhCC--CEEEcCcchHhHhhcCCEEEECCC
Confidence 34457899999995 678999999999999999999977554332 11111 2222211 222345799999999
Q ss_pred CCC
Q 039397 120 LGH 122 (349)
Q Consensus 120 ~~~ 122 (349)
+..
T Consensus 80 i~~ 82 (488)
T PRK03369 80 FRP 82 (488)
T ss_pred CCC
Confidence 864
|
|
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.1 Score=48.94 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=40.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
-+++||.|+|.|-|.=+|+-++..|.++|++|.++......+++..
T Consensus 227 i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~ 272 (364)
T PLN02616 227 VEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEIT 272 (364)
T ss_pred CCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHH
Confidence 4789999999999999999999999999999999987766665543
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.18 Score=46.03 Aligned_cols=42 Identities=12% Similarity=0.141 Sum_probs=37.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
+|++++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 177 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA 177 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 578999999999999999999999999999999887766544
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.17 Score=46.39 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=37.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
.|++++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 183 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL 183 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 478999999999999999999999999999999887665544
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.098 Score=39.23 Aligned_cols=59 Identities=10% Similarity=0.198 Sum_probs=42.6
Q ss_pred CCchHHHHHHHHHHHcC---CeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEec-cccCCCcceeeecC
Q 039397 55 ASSDIGEQIAYEYAKRK---ANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLN-NKESKAVDHLVNTA 118 (349)
Q Consensus 55 as~GIG~ala~~la~~G---~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~~~g~iDvlVnnA 118 (349)
|+|.+|.++++.|.+.| .+|.++ +|++++.++...+.. ......+ .+....-|++|.+.
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~~~~advvilav 69 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG-----VQATADDNEEAAQEADVVILAV 69 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT-----TEEESEEHHHHHHHTSEEEE-S
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc-----cccccCChHHhhccCCEEEEEE
Confidence 67999999999999999 999966 999999888776642 2222222 22233568888865
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.5 Score=42.85 Aligned_cols=75 Identities=11% Similarity=0.108 Sum_probs=48.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEecccc----CCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLNNKE----SKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d~~~----~g~iDvlVnnAg~ 120 (349)
.|++||..|+++|.-..++........+|+.++.+++.++...+... .....+.++..|.+. .+.+|+++.|..+
T Consensus 77 ~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~~~v~ 156 (272)
T PRK11873 77 PGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIISNCVI 156 (272)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEEcCcc
Confidence 57899999998876443333333334589999999888776655442 222356666666433 3478999977643
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.17 Score=47.86 Aligned_cols=71 Identities=18% Similarity=0.220 Sum_probs=42.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHc-CCeEE-EEecCcchhhhHHHHhcC--CCCeEEEEEeccccC-CCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKR-KANLV-LVARRENRLQGSTIDEYN--PINEVTLVSLNNKES-KAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~-G~~Vv-~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d~~~~-g~iDvlVnnAg 119 (349)
+|.|.||||.+|..+++.|.++ +.+++ +++++....+........ ......+...|.++. .++|+++.+.+
T Consensus 2 kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 2 KVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALP 77 (346)
T ss_pred EEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCC
Confidence 6899999999999999999987 77888 445443322222221111 100122222332222 37899998875
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.15 Score=49.58 Aligned_cols=82 Identities=20% Similarity=0.126 Sum_probs=53.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
.++.+|+|+|-|- |.=|+++++.|.++|++|++.|.++.............+..+..-.-+.+.....|++|-|.|+..
T Consensus 3 ~~~~~~kv~V~GL-G~sG~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~~ 81 (448)
T COG0771 3 EDFQGKKVLVLGL-GKSGLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGSHDDEDLAEFDLVVKSPGIPP 81 (448)
T ss_pred ccccCCEEEEEec-ccccHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCccchhccccCCEEEECCCCCC
Confidence 3455899999997 445899999999999999999977665211111111111122222222345567899999999976
Q ss_pred Ccc
Q 039397 123 TFF 125 (349)
Q Consensus 123 ~~~ 125 (349)
..+
T Consensus 82 ~~p 84 (448)
T COG0771 82 THP 84 (448)
T ss_pred CCH
Confidence 554
|
|
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.12 Score=48.10 Aligned_cols=45 Identities=13% Similarity=0.172 Sum_probs=39.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.|+|.|-|.=+|+-++..|.++|++|.++......+++.
T Consensus 210 i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~ 254 (345)
T PLN02897 210 VEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQI 254 (345)
T ss_pred CCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHH
Confidence 478999999999999999999999999999999998766655543
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.2 Score=46.51 Aligned_cols=42 Identities=19% Similarity=0.275 Sum_probs=34.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
+++++++||+|++|...++.....|++|+++++++++.+.+.
T Consensus 144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~ 185 (324)
T cd08291 144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK 185 (324)
T ss_pred CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 355556699999999999888888999999999887766543
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.11 Score=49.82 Aligned_cols=41 Identities=20% Similarity=0.196 Sum_probs=36.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhh
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~ 85 (349)
.+.||+++|.|. |.||+.+|+.+...|++|+++++++.+..
T Consensus 192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~ 232 (406)
T TIGR00936 192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRAL 232 (406)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHH
Confidence 478999999996 77999999999999999999999876543
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PLN02477 glutamate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.27 Score=47.40 Aligned_cols=38 Identities=13% Similarity=0.275 Sum_probs=33.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEE-EEecC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLV-LVARR 80 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv-~~~r~ 80 (349)
..+++|+++.|-| .|.+|+.+|+.|.++|++|+ +.+.+
T Consensus 201 g~~l~g~~VaIqG-fGnVG~~~A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 201 GKSIAGQTFVIQG-FGNVGSWAAQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred CCCccCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEECCC
Confidence 4478999999997 69999999999999999999 55554
|
|
| >COG5322 Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.13 Score=45.91 Aligned_cols=77 Identities=23% Similarity=0.232 Sum_probs=53.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEeccccCCCcceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
.+++.-+|.|.|++|.||.++|+.|+.++....++.|+.+..+...... ............|.+.. .-|++|..|..
T Consensus 163 idlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~-~e~i~v~vAs~ 240 (351)
T COG5322 163 IDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALP-QEDILVWVASM 240 (351)
T ss_pred cCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeecccccc-ccceEEEEeec
Confidence 4778889999999999999999999999999999999876655433222 22222233334443332 34777777764
|
|
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.15 Score=46.56 Aligned_cols=47 Identities=17% Similarity=0.311 Sum_probs=40.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHH--cCCeEEEEecCcchhhhHH
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAK--RKANLVLVARRENRLQGST 88 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~--~G~~Vv~~~r~~~~l~~~~ 88 (349)
.-+++||.++|.|.|.-+|+-++..|.+ +|++|.++......+++..
T Consensus 153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~ 201 (284)
T PRK14193 153 DVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHT 201 (284)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHH
Confidence 3478999999999999999999999999 7999999987766555433
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.19 Score=46.32 Aligned_cols=42 Identities=19% Similarity=0.190 Sum_probs=37.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
.|.+++|.|+++++|.++++.+...|++|+++.+++++.+..
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 179 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL 179 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence 578999999999999999999999999999999988765544
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.21 Score=47.48 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=35.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~ 87 (349)
.|++++|+|+ |+||...++.+...|+ +|+.+++++++++.+
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a 226 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA 226 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 4789999985 8999999998888999 799999988876654
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.17 Score=44.33 Aligned_cols=38 Identities=34% Similarity=0.413 Sum_probs=33.5
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARR 80 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~ 80 (349)
...+++++|+|.|+ ||+|..+++.|++.|. ++.++|.+
T Consensus 23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 44678889999996 8999999999999997 59999887
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.19 Score=48.06 Aligned_cols=70 Identities=13% Similarity=0.156 Sum_probs=45.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----cccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----NKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~iDvlVnnAg 119 (349)
.|++++|.|+ |++|...++.....|++|++++++.++..+...++. . +..+...+ .+..+++|+++.+.|
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lG--a-~~~i~~~~~~~v~~~~~~~D~vid~~G 251 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLG--A-DSFLVTTDSQKMKEAVGTMDFIIDTVS 251 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCC--C-cEEEcCcCHHHHHHhhCCCcEEEECCC
Confidence 5889999986 899999999988999999999887655333333321 1 11110111 111245788888776
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.079 Score=49.90 Aligned_cols=68 Identities=19% Similarity=0.188 Sum_probs=43.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeE---EEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANL---VLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~V---v~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
+|.|.||||.+|+++++.|.++|+.+ +..+++....+... ..+.+......+...+.++|++|.++|.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~----~~~~~~~~~~~~~~~~~~~D~v~~a~g~ 71 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT----FKGKELEVNEAKIESFEGIDIALFSAGG 71 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee----eCCeeEEEEeCChHHhcCCCEEEECCCH
Confidence 37899999999999999999988764 34445544333222 1122333333344445678888888764
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.25 Score=46.15 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=33.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
.|++++|.|+++++|.++++.+...|++|+++.++.+
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP 182 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence 5789999999999999999999999999999988764
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.13 Score=47.16 Aligned_cols=40 Identities=20% Similarity=0.283 Sum_probs=34.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
++|.|.|+ |-+|..+|..++..|++|++.+++++.++...
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~ 45 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGR 45 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 36777787 79999999999999999999999998877643
|
|
| >PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.21 Score=49.20 Aligned_cols=78 Identities=10% Similarity=0.035 Sum_probs=50.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc-hhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-RLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~-~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
.+++||.++|-|.+ -=|++.++.|.++|++|++.+.++. ...+ ..++... .......-+.+.....|.+|.+.|+.
T Consensus 4 ~~~~~~~v~v~G~G-~sG~~~~~~l~~~g~~v~~~d~~~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~d~vV~SpgI~ 80 (468)
T PRK04690 4 SQLEGRRVALWGWG-REGRAAYRALRAHLPAQALTLFCNAVEARE-VGALADA-ALLVETEASAQRLAAFDVVVKSPGIS 80 (468)
T ss_pred hhcCCCEEEEEccc-hhhHHHHHHHHHcCCEEEEEcCCCcccchH-HHHHhhc-CEEEeCCCChHHccCCCEEEECCCCC
Confidence 34678999999995 4799999999999999999995543 2222 1223221 11111111123345689999999996
Q ss_pred CC
Q 039397 122 HT 123 (349)
Q Consensus 122 ~~ 123 (349)
..
T Consensus 81 ~~ 82 (468)
T PRK04690 81 PY 82 (468)
T ss_pred CC
Confidence 43
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.21 Score=48.88 Aligned_cols=39 Identities=23% Similarity=0.434 Sum_probs=34.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
+++|.|+ |.+|+++++.|.++|++|++++++++..+...
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~ 40 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQ 40 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 5888887 99999999999999999999999988766544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 349 | ||||
| 1y5m_A | 276 | The Crystal Structure Of Murine 11b-Hydroxysteroid | 5e-14 | ||
| 3gmd_A | 264 | Structure-Based Design Of 7-Azaindole-Pyrrolidines | 1e-13 | ||
| 2bel_A | 283 | Structure Of Human 11-Beta-Hydroxysteroid Dehydroge | 1e-13 | ||
| 1xu7_A | 286 | Crystal Structure Of The Interface Open Conformatio | 1e-13 | ||
| 3pdj_A | 273 | Crystal Structure Of Human 11-Beta-Hydroxysteroid D | 1e-13 | ||
| 3d5q_A | 272 | Crystal Structure Of 11b-Hsd1 In Complex With Triaz | 1e-13 | ||
| 2ilt_A | 275 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 1e-13 | ||
| 2rbe_A | 275 | The Discovery Of 2-Anilinothiazolones As 11beta-Hsd | 1e-13 | ||
| 2irw_A | 264 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 2e-13 | ||
| 3ch6_A | 286 | Crystal Structure Of 11beta-Hsd1 Double Mutant (L26 | 2e-13 | ||
| 4bb5_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 3e-13 | ||
| 4hfr_A | 272 | Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In | 3e-13 | ||
| 4bb6_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 3e-13 | ||
| 3lz6_A | 263 | Guinea Pig 11beta Hydroxysteroid Dehydrogenase With | 8e-13 | ||
| 1xse_A | 295 | Crystal Structure Of Guinea Pig 11beta-Hydroxystero | 9e-13 | ||
| 3g49_A | 277 | N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b- | 1e-12 | ||
| 3dwf_A | 276 | Crystal Structure Of The Guinea Pig 11beta-Hydroxys | 1e-12 | ||
| 3rku_A | 287 | Substrate Fingerprint And The Structure Of Nadp+ De | 1e-09 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 3e-09 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-09 | ||
| 2nwq_A | 272 | Short Chain Dehydrogenase From Pseudomonas Aerugino | 7e-09 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 8e-09 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 1e-08 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 1e-08 | ||
| 2dtd_A | 264 | Structure Of Thermoplasma Acidophilum Aldohexose De | 3e-08 | ||
| 2zk7_A | 257 | Structure Of A C-Terminal Deletion Mutant Of Thermo | 3e-08 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 5e-08 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 7e-08 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-07 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 3e-07 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 3e-07 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-07 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 4e-07 | ||
| 2jah_A | 247 | Biochemical And Structural Analysis Of The Clavulan | 4e-07 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 5e-07 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 5e-07 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 5e-07 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 5e-07 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 6e-07 | ||
| 1yb1_A | 272 | Crystal Structure Of Human 17-Beta-Hydroxysteroid D | 6e-07 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 7e-07 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 8e-07 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-06 | ||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 1e-06 | ||
| 3p19_A | 266 | Improved Nadph-Dependent Blue Fluorescent Protein L | 1e-06 | ||
| 3v2g_A | 271 | Crystal Structure Of A DehydrogenaseREDUCTASE FROM | 2e-06 | ||
| 1o5i_A | 249 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 2e-06 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 2e-06 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 3e-06 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 3e-06 | ||
| 3vtz_A | 269 | Structure Of Thermoplasma Volcanium Aldohexose Dehy | 4e-06 | ||
| 1fdu_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M | 5e-06 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 6e-06 | ||
| 1fdw_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M | 6e-06 | ||
| 1fds_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C | 6e-06 | ||
| 1a27_A | 289 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C | 6e-06 | ||
| 1equ_A | 327 | Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin | 6e-06 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 7e-06 | ||
| 2ztm_A | 260 | T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L | 7e-06 | ||
| 1wmb_A | 260 | Crystal Structure Of Nad Dependent D-3-Hydroxybutyl | 7e-06 | ||
| 2ztu_A | 260 | T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C | 8e-06 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 9e-06 | ||
| 3ged_A | 247 | Fingerprint And Structural Analysis Of A Apo Scor E | 1e-05 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 1e-05 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 1e-05 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 2e-05 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 2e-05 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 2e-05 | ||
| 1iol_A | 327 | Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com | 2e-05 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 3e-05 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 3e-05 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 3e-05 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 3e-05 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 4e-05 | ||
| 3o38_A | 266 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 4e-05 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 5e-05 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 6e-05 | ||
| 1bdb_A | 277 | Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From | 7e-05 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 1e-04 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 1e-04 | ||
| 3kzv_A | 254 | The Crystal Structure Of A Cytoplasmic Protein With | 1e-04 | ||
| 4eso_A | 255 | Crystal Structure Of A Putative Oxidoreductase Prot | 1e-04 | ||
| 3vc7_A | 254 | Crystal Structure Of A Putative Oxidoreductase From | 1e-04 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 2e-04 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 3e-04 | ||
| 3icc_A | 255 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car | 3e-04 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 3e-04 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 3e-04 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 4e-04 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 4e-04 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 6e-04 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 6e-04 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 6e-04 | ||
| 2y93_A | 281 | Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2 | 7e-04 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 7e-04 | ||
| 3uf0_A | 273 | Crystal Structure Of A Putative Nad(P) Dependent Gl | 7e-04 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 9e-04 |
| >pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276 | Back alignment and structure |
|
| >pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264 | Back alignment and structure |
|
| >pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283 | Back alignment and structure |
|
| >pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286 | Back alignment and structure |
|
| >pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275 | Back alignment and structure |
|
| >pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264 | Back alignment and structure |
|
| >pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286 | Back alignment and structure |
|
| >pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272 | Back alignment and structure |
|
| >pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263 | Back alignment and structure |
|
| >pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295 | Back alignment and structure |
|
| >pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277 | Back alignment and structure |
|
| >pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276 | Back alignment and structure |
|
| >pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264 | Back alignment and structure |
|
| >pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266 | Back alignment and structure |
|
| >pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271 | Back alignment and structure |
|
| >pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269 | Back alignment and structure |
|
| >pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289 | Back alignment and structure |
|
| >pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254 | Back alignment and structure |
|
| >pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255 | Back alignment and structure |
|
| >pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 222 bits (569), Expect = 2e-71
Identities = 70/272 (25%), Positives = 112/272 (41%), Gaps = 31/272 (11%)
Query: 36 LYNNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYN 93
L F E ++ K VI+TGAS IG ++AY AK A++V+ AR + LQ S E
Sbjct: 17 LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 76
Query: 94 PINEVTLV-------SLNNKESKA------VDHLVNTASLGHTFFFEEVTDTSIFPRLLD 140
+ + ++A +D L+ + D + ++
Sbjct: 77 AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH-DDIHHVRKSME 135
Query: 141 INFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+NF V T ALP L +SNG +VV +S+ + P ++ Y+++K AL F+ S+R E
Sbjct: 136 VNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEY 195
Query: 201 NDE---VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257
+ V IT+ G I E VH+ P E+ A I+ G
Sbjct: 196 SVSRVNVSITLCVLGLIDTETAMKAV------------SGIVHMQAAPKEECALEIIKGG 243
Query: 258 CRGDTYVKFPSWYDVFLLYRVFAPHVLNWTFR 289
V + S LL R + +L + +
Sbjct: 244 ALRQEEVYYDSSLWTTLLIRNPSRKILEFLYS 275
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 1e-34
Identities = 56/261 (21%), Positives = 96/261 (36%), Gaps = 42/261 (16%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
++ ++V+ITGA IG AYE+AK K+ LVL ++ L+ T + + +V
Sbjct: 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE-ETAAKCKGLGAKVHTFV 86
Query: 103 LN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
++ E V LVN A + +T D + ++N + +
Sbjct: 87 VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQD-PQIEKTFEVNVLAHFW 145
Query: 149 PTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL----NDE 203
T LP + ++N G +V AS + +P + Y S+K A V F+++L EL
Sbjct: 146 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 205
Query: 204 VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPV---EDFARLIVSGACRG 260
V T ++ K + GP E+ ++ G
Sbjct: 206 VKTTCLCPNFVNTGFIKN-----------------PSTSLGPTLEPEEVVNRLMHGILTE 248
Query: 261 DTYVKFPSWYDVFLLYRVFAP 281
+ PS P
Sbjct: 249 QKMIFIPSSIAFLTTLERILP 269
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-32
Identities = 44/254 (17%), Positives = 92/254 (36%), Gaps = 33/254 (12%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTL 100
++ + +TG ++ +G + + + + + R++ + +T++ EV
Sbjct: 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 101 VSLN--NKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
V L+ ++E V L N A + EE + + LL +N G
Sbjct: 64 VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDD-WDWLLGVNLHGV 122
Query: 147 VYPTFVALPYLHESN-------GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
V +P + E G VV AS+ +L +Y + K A+ ESL +
Sbjct: 123 VNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYS 182
Query: 200 L-NDEVGIT------IATHGWIGIEMTKGKFMLEDGAEMQWKEER--EVHVAGGPVEDFA 250
L E+G++ + ++ + ++ E + ER VH G +
Sbjct: 183 LLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIG 242
Query: 251 RLIVSGACRGDTYV 264
++ ++
Sbjct: 243 ARVIEAMKANRLHI 256
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 3e-31
Identities = 44/225 (19%), Positives = 75/225 (33%), Gaps = 32/225 (14%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
M +I+TGA S +G + +R + ++ RR RLQ N V + +
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQ-QQELLLG--NAVIGIVAD 57
Query: 105 NKESKAVDH--------------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+ VD +++ A G T R+++ N +
Sbjct: 58 LAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQ-IRRVMESNLVSTILVA 116
Query: 151 FVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIA 209
+ + E G + S + SLY ++K + F ESLR EL D + +
Sbjct: 117 QQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNL 176
Query: 210 THGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
I E ++ M P ED A ++
Sbjct: 177 YPSGIRSEFWDNTDHVDPSGFMT------------P-EDAAAYML 208
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-29
Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 12/170 (7%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE 107
+++ITGASS +G ++A Y L R E++L + + + L + +
Sbjct: 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLS-TVTNCLSNNVGYRARDLASHQ 60
Query: 108 S---------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLH 158
+V++A G+ +E D L++ N + +
Sbjct: 61 EVEQLFEQLDSIPSTVVHSAGSGYFGLLQE-QDPEQIQTLIENNLSSAINVLRELVKRYK 119
Query: 159 ESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
+ VV+ S P + S Y + K A+ ES+R EL + + I
Sbjct: 120 DQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGK-PMKI 168
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 4e-28
Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 32/249 (12%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE----- 97
+ + ++TG +S IG A E+A+R A LVL + L+ ++ +
Sbjct: 27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALE-QAVNG---LRGQGFDA 82
Query: 98 ------VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFW 144
V L + VD + + A + ++ + ++DI+ W
Sbjct: 83 HGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDD-WRWVIDIDLW 141
Query: 145 GNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
G+++ LP L E G + AS +P + Y AK +V E+L E+
Sbjct: 142 GSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKP 201
Query: 203 E-VGIT------IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVS 255
+G++ + T E +G +D ARL
Sbjct: 202 NGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTAD 261
Query: 256 GACRGDTYV 264
Y+
Sbjct: 262 AILANRLYI 270
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-26
Identities = 56/233 (24%), Positives = 84/233 (36%), Gaps = 35/233 (15%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINE-- 97
S + + IITGAS IG IA A +VL+AR + L+ I N +
Sbjct: 2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEP 61
Query: 98 ------VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFW 144
+T + +++ AVD LVN A++ E D F ++++IN
Sbjct: 62 IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDN--FRKIMEINVI 119
Query: 145 GNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
+ G + AS +Y S K AL+ ESL EL
Sbjct: 120 AQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPL 179
Query: 204 VGITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
GI + T GW+ +M A +K+E +D I
Sbjct: 180 -GIRVTTLCPGWVNTDMA-------KKAGTPFKDEE-----MIQPDDLLNTIR 219
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 3e-25
Identities = 53/241 (21%), Positives = 86/241 (35%), Gaps = 34/241 (14%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPINEVTL-- 100
++ +K VI A IG + E KR ++ R + + NP +T
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 101 --VSLNNKESKA-----------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
V++ ESK VD L+N A G + D R + INF G V
Sbjct: 62 YDVTVPVAESKKLLKKIFDQLKTVDILINGA--G-------ILDDHQIERTIAINFTGLV 112
Query: 148 YPTFVALPYLHESN---GRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
T L + + G ++ N SV + + ++ +Y+++KAA+V+F SL
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172
Query: 204 VGITIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261
G+T + G + F E + E H E + V
Sbjct: 173 -GVTAYSINPGITRTPLVH-TFNSWLDVEPRVAELLLSHPTQTS-EQCGQNFVKAIEANK 229
Query: 262 T 262
Sbjct: 230 N 230
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 5e-25
Identities = 50/265 (18%), Positives = 100/265 (37%), Gaps = 41/265 (15%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRK---ANLVLVARRENRLQG--STIDEYNPIN 96
++ + V ++TGAS G +A + A+ + +++ AR E+ L+ + P
Sbjct: 1 ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60
Query: 97 EVTLVSLN------------------NKESKAVDHLVNTASL--GHTFFFEEVTDTSIFP 136
+V L + + E L+N A+ + F V D +
Sbjct: 61 KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120
Query: 137 RLLDINFWGNVYPTFVALPYLHESNG--RVVVN-ASVENWLPLPRMSLYASAKAALVTFY 193
+N + T L +S G + VVN +S+ P LY + KAA Y
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180
Query: 194 ESLRFELNDEVGITIATH--GWIGIEMTKGKFMLEDGAEMQWKEE-REVHVAG--GPVED 248
+ L E E + + ++ G + +M + E + + + + +++ G
Sbjct: 181 QVLAAE---EPSVRVLSYAPGPLDNDMQ--QLARETSKDPELRSKLQKLKSDGALVDCGT 235
Query: 249 FARLIVSGACRGDTYV--KFPSWYD 271
A+ ++ + DT+ +YD
Sbjct: 236 SAQKLLG-LLQKDTFQSGAHVDFYD 259
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 8e-25
Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 16/169 (9%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPIN------E 97
E KV +ITGAS IGE IA A+ L L AR +RL+ + + + +
Sbjct: 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60
Query: 98 VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
V+ + VD +V A LG+ EE+ F ++++N G
Sbjct: 61 VSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEEL-SEEEFHEMIEVNLLGVWRTL 119
Query: 151 FVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
L L + G +V S + +P Y S K A + + E
Sbjct: 120 KAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE 168
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 3e-24
Identities = 53/231 (22%), Positives = 86/231 (37%), Gaps = 31/231 (13%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLV--ARRENRLQGSTIDEYNPINEVTLVSLN- 104
KV+++TG S IG+ I + V+ AR E L+ ++Y + V +
Sbjct: 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLK-KLKEKYG--DRFFYVVGDI 59
Query: 105 NKESKA-------------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
++S +D LV A + D + + +L DINF+ V
Sbjct: 60 TEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVG 119
Query: 152 VALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---I 208
+ALP L ++NG VV +S + Y S+KAAL F +L E E + +
Sbjct: 120 IALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE---ERQVKAIAV 176
Query: 209 ATHGWIGIEMTKG---KFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
A G + +M + Q K R + A +
Sbjct: 177 AP-GIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYA 226
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 1e-23
Identities = 37/234 (15%), Positives = 71/234 (30%), Gaps = 32/234 (13%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN----E 97
S + V + GA IG +IA ++A + R +L + E I
Sbjct: 2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLA-PLVAE---IEAAGGR 57
Query: 98 VTLVSLNNKESKAV-------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFW 144
+ SL+ + V + + F E TD F ++ ++ W
Sbjct: 58 IVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRV-FRKVWEMACW 116
Query: 145 GNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
+ + G++ + + + +ASAK L +S+ EL +
Sbjct: 117 AGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPK 176
Query: 204 VGITIATH---GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
I +A + + + +M K+ P A
Sbjct: 177 -NIHVAHLIIDSGVDTAWVRERR-----EQMFGKDALANPDLLMPPAAVAGAYW 224
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 2e-23
Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 8/171 (4%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST------IDEYNPINEV 98
M VI+ G +G I + K ++ + N S + +
Sbjct: 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSI 60
Query: 99 TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLH 158
+ ++ + VD + A ++ + W + +A +L
Sbjct: 61 LEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK 120
Query: 159 ESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND-EVGITI 208
G + + + P P M Y AKAA+ SL + + +
Sbjct: 121 PG-GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 170
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 2e-23
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 12/171 (7%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPIN-EVT- 99
V+ITGAS IGE A + + L+AR E RLQ + ++ P+ +V
Sbjct: 2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVRE 61
Query: 100 ------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
V+ + + LVN A +G E+ + +LD N G A
Sbjct: 62 EGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHEL-TLEEWRLVLDTNLTGAFLGIRHA 120
Query: 154 LPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
+P L G +VN S+ P + Y ++K L+ + +L +
Sbjct: 121 VPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREA 171
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 5e-23
Identities = 42/220 (19%), Positives = 72/220 (32%), Gaps = 34/220 (15%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESK 109
V+ITGA+ +G A A + +L+L RR L E L ++
Sbjct: 3 VLITGATGGLGGAFA--RALKGHDLLLSGRRAGALA-ELAREVG--ARALPADLADELEA 57
Query: 110 A--------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN 161
+D LV+ E + +L + L +
Sbjct: 58 KALLEEAGPLDLLVHAVGKAGRASVREAGR-DLVEEMLAAHLLT----AAFVLKHARFQK 112
Query: 162 -GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMT 219
R V + ++ +P + YA+AK AL + E+ R EL E V + + + +
Sbjct: 113 GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLW 172
Query: 220 KGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259
G + E+ AR ++ G R
Sbjct: 173 AP-----LGGPPKG---------ALSPEEAARKVLEGLFR 198
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 94.5 bits (236), Expect = 7e-23
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ------GSTIDEYNPI 95
++ KV +ITGASS IGE A A A + + ARR +L+ + + + +
Sbjct: 2 PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVL 61
Query: 96 N-EVT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+V V+ + +D LVN A + E+ DT+ + R++D N G +
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDA-DTTDWTRMIDTNLLGLM 120
Query: 148 YPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
Y T ALP+L S G VV +S+ + + ++Y + K + F E+LR E+ +
Sbjct: 121 YMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 1e-22
Identities = 48/222 (21%), Positives = 86/222 (38%), Gaps = 23/222 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTIDEYNP 94
+++ K+ ++TGA+ +G +I + + R + + R L D
Sbjct: 2 SLKKKIAVVTGATGGMGIEIVKDLS-RDHIVYALGRNPEHLAALAEIEGVEPIESDIVKE 60
Query: 95 INEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVAL 154
+ E V K VD LV+ A++ E + + LD+N + L
Sbjct: 61 VLEEGGVD-KLKNLDHVDTLVHAAAVARDTTIEAGSVAE-WHAHLDLNVIVPAELSRQLL 118
Query: 155 PYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATH--G 212
P L ++G V+ S P P ++YA++K AL ++ R E + GI ++T G
Sbjct: 119 PALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANN-GIRVSTVSPG 177
Query: 213 WIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
M +G L D ++ E ++ A I
Sbjct: 178 PTNTPMLQG---LMDSQGTNFRPEI-----YIEPKEIANAIR 211
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-22
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 20/182 (10%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKR---KANLVLVARRENRLQ--GSTIDEYNPIN 96
+E + K V+ITGAS+ IG+ A EY + L+L ARR +L+ TID+ P
Sbjct: 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNA 87
Query: 97 EVTLVSL--NNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDIN 142
+V + L E K +D LVN A T + D N
Sbjct: 88 KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTN 147
Query: 143 FWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201
+ T LP N G +V S+ P S+Y ++K A+ F +SLR EL
Sbjct: 148 VTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELI 207
Query: 202 DE 203
+
Sbjct: 208 NT 209
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 2e-22
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVT- 99
K+V+ITGASS IGE IA +++ L+L+ARR RL+ + +VT
Sbjct: 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTD 70
Query: 100 ------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
++ K D +VN A + + + + + R+ D+N G +
Sbjct: 71 KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQ-EANEWQRMFDVNVLGLLNGMQAV 129
Query: 154 LPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
L + N ++N +S+ P + Y K A+ E++R E+
Sbjct: 130 LAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAA 179
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 8e-22
Identities = 26/173 (15%), Positives = 58/173 (33%), Gaps = 8/173 (4%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI------DEYNPI 95
+ + E + V++ G +G + + R + + EN +++
Sbjct: 2 AASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQA 61
Query: 96 NEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155
++VT + VD ++ A + + + + W + + +A
Sbjct: 62 DQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATK 121
Query: 156 YLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGIT 207
+L E G + + + P M Y AK A+ +SL + G
Sbjct: 122 HLKEG-GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAA 173
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-21
Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 22/218 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI--DEYNPINEVTLV 101
+ K +++ G S +G ++ + + N + + REN + + +++
Sbjct: 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVI 78
Query: 102 SLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPTFVALPYLHE 159
N +S VD V A G +D + ++D+N + + L++
Sbjct: 79 EKINSKSIKVDTFVCAA--GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ 136
Query: 160 SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEV-GITI-ATH-GWIGI 216
G V+ + M Y + KAA + L E G T +
Sbjct: 137 G-GLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDT 195
Query: 217 EMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ + D W P+ + A +
Sbjct: 196 PTNRK--YMSDANFDDW----------TPLSEVAEKLF 221
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 6e-21
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 16/170 (9%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ------GSTIDEYNPIN-E 97
+ DKV++ITGAS IGE IA E A ++L ARR+ R++ +
Sbjct: 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD 61
Query: 98 VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
VT +D LVN A + V + R++D+N G ++
Sbjct: 62 VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAV-KVDEWERMIDVNIKGVLWGI 120
Query: 151 FVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
LP + ++N S+ +P ++Y + K A+ + LR E
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE 170
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 7e-21
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 17/178 (9%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLV 101
+ + ITGA+S GE A +A+ +LVL RRE RLQ + E + V +
Sbjct: 16 RGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQ-ALAGELSAKTRVLPL 74
Query: 102 SLN--NKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+L+ ++ + + L+N A L + D + ++D N G +
Sbjct: 75 TLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLL 134
Query: 148 YPTFVALPYLHESN-GRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
Y T + LP L G +VN SV P P +Y KA + F +LR +L
Sbjct: 135 YSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGT 192
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 7e-21
Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE 107
+++ GAS +G + K+ A ++ R + + + ++
Sbjct: 4 MKILLIGASGTLGSAVKERLEKK-AEVITAGRHSGDVTVDITNI-------DSIKKMYEQ 55
Query: 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVN 167
VD +V+ E+T + G + + + L++ G +
Sbjct: 56 VGKVDAIVSATGSATFSPLTELTPEK-NAVTISSKLGGQINLVLLGIDSLND-KGSFTLT 113
Query: 168 ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
+ P+ + + A A A+ F +S E+ GI I
Sbjct: 114 TGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR--GIRI 152
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 1e-20
Identities = 39/182 (21%), Positives = 66/182 (36%), Gaps = 22/182 (12%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTL 100
E D++ ++TGAS IG +A ++ +V AR ++ + +
Sbjct: 28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 87
Query: 101 VSLN--NKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
+ N+E VD +N A L TS + + ++N
Sbjct: 88 YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSG-STSGWKDMFNVNVLAL 146
Query: 147 VYPTFVALPYLHESN---GRVVVNASV--ENWLPLPRMSLYASAKAALVTFYESLRFELN 201
T A + E N G ++ S+ LPL Y++ K A+ E LR EL
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206
Query: 202 DE 203
+
Sbjct: 207 EA 208
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 2e-20
Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 36/239 (15%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------- 97
+ DKVV+I+G +G +A A++ A+LVL AR RL+ + + +
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLE-DVAKQ---VTDTGRRALS 64
Query: 98 ----VT-------LVSLNNKESKAVDHLVNTASLGHTFF-FEEVTDTSIFPRLLDINFWG 145
+T LV K VD ++N A + F T +++ +G
Sbjct: 65 VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTF-EHMRDAIELTVFG 123
Query: 146 NVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
+ P L ES G VV S+ + Y AK+AL+ ++L EL ++ G
Sbjct: 124 ALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEK-G 182
Query: 206 IT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG-------GPVEDFARLIV 254
I + G+I K F + G E+ A ++ A I+
Sbjct: 183 IRVNSVLP-GYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAIL 240
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 6e-20
Identities = 47/229 (20%), Positives = 88/229 (38%), Gaps = 24/229 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
N + K I+ G + +G + A ++L R E+ + +E+ P V +
Sbjct: 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIA-RIREEFGP--RVHALRS 61
Query: 104 NNKESKAVDH--------------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
+ + + L A + F++V++ S + R +N G +
Sbjct: 62 DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS-YDRQFAVNTKGAFFT 120
Query: 150 TFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI- 208
P + E G +V +SV + P MS+Y+++KAALV+F L EL GI +
Sbjct: 121 VQRLTPLIREG-GSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPR-GIRVN 178
Query: 209 ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ G+I + E + G ++ AR ++
Sbjct: 179 SVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVL 227
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 9e-20
Identities = 51/238 (21%), Positives = 81/238 (34%), Gaps = 31/238 (13%)
Query: 39 NFYSENM---EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI 95
N Y ++M K+ I+TGA S +G +A A + L RR + LQ T E
Sbjct: 17 NLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQ-ETAAEIGD- 74
Query: 96 NEVTLVSLNNKESKAV--------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDI 141
+ V + + +V D L N A G E + + +++D
Sbjct: 75 -DALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDT 133
Query: 142 NFWGNVYPTFVALPYLHESN---GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRF 198
N G T A + GR++ N S+ P P + Y + K A+ +S
Sbjct: 134 NLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSL 193
Query: 199 ELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ I G M + A++ K E V A +V
Sbjct: 194 DGRVH-DIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPV-----MDVAHVASAVV 245
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 1e-19
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---GSTIDEYNPIN-EVT----- 99
+V++TGA++ GE I + ++ ++ RR+ RLQ D +V
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61
Query: 100 --LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL 157
+++ E +D LVN A L + ++D N G VY T LP +
Sbjct: 62 EEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGM 121
Query: 158 HESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
E N G ++ S P ++Y + KA + F +LR +L+
Sbjct: 122 VERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGT 168
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 85.6 bits (213), Expect = 2e-19
Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 27/216 (12%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTL 100
S M++KVVIITG SS +G+ +A +AK A +V+ R + +L+ E ++
Sbjct: 1 SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLE-EAKLEIEQFPGQILT 59
Query: 101 VSLNNKESKAV--------------DHLVNTASLGHTFF--FEEVTDTSIFPRLLDINFW 144
V ++ + + + D L+N A F E+++ + + +++I
Sbjct: 60 VQMDVRNTDDIQKMIEQIDEKFGRIDILINNA--AGNFICPAEDLSV-NGWNSVINIVLN 116
Query: 145 GNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
G Y + Y E G ++ + W P + A+AKA ++ ++L E
Sbjct: 117 GTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGR 176
Query: 203 EVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKE 235
+ GI IA G I K + + + +
Sbjct: 177 KYGIRVNAIAP-GPIERTGGADKLWISEEMAKRTIQ 211
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 86.8 bits (215), Expect = 2e-19
Identities = 41/190 (21%), Positives = 68/190 (35%), Gaps = 25/190 (13%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT-- 99
+ + V ITGAS IG+ IA + AK AN+V+ A+ Y E+
Sbjct: 40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV 99
Query: 100 -------------------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLD 140
V K+ +D LVN AS + T T +++
Sbjct: 100 GGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLD-TPTKRLDLMMN 158
Query: 141 INFWGNVYPTFVALPYLHES-NGRVVVNASVENWLP--LPRMSLYASAKAALVTFYESLR 197
+N G + +PYL +S ++ + N P + Y AK + + +
Sbjct: 159 VNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMA 218
Query: 198 FELNDEVGIT 207
E E+ +
Sbjct: 219 EEFKGEIAVN 228
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 2e-19
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 29/237 (12%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTIDEYNPI- 95
+K VIITG+S+ IG A +A+ AN+ + R RL+ G + + N +
Sbjct: 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64
Query: 96 ------NEV-TLVSLNNKESKAVDHLVNTASLGHTFFFEEVT---DTSIFPRLLDINFWG 145
+ +++ K+ +D LVN A F I+ + L +N
Sbjct: 65 ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124
Query: 146 NVYPTFVALPYLHESNGRVVVNASVENWL-PLPRMSLYASAKAALVTFYESLRFELNDEV 204
+ T P+L S G +V +S+ P YA AKAAL + S +L
Sbjct: 125 VIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKF- 183
Query: 205 GITI-ATH-GWIGIEMTKGKFMLEDGAEMQWK---EEREVHVAG--GPVEDFARLIV 254
GI + + G + T M + ++ + +E G G E A +I+
Sbjct: 184 GIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 240
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 3e-19
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 31/237 (13%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTIDEYNPIN 96
K VIITG+S+ IG A +AK A + + R E+RL+ G ++ N +
Sbjct: 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84
Query: 97 -EVT-------LVSLNNKESKAVDHLVNTASLGHTFF-FEEVTDTSI--FPRLLDINFWG 145
+VT +++ + +D LVN A G TD + + + +NF
Sbjct: 85 ADVTEASGQDDIINTTLAKFGKIDILVNNA--GANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 146 NVYPTFVALPYLHESNGRVVVNASVENWL-PLPRMSLYASAKAALVTFYESLRFELNDEV 204
+ T +L ++ G +V +S+ YA AKAAL + +L
Sbjct: 143 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH- 201
Query: 205 GITI-ATH-GWIGIEMTKGKFMLEDGAEM---QWKEEREVHVAG--GPVEDFARLIV 254
G+ + + G + + E ++ +E G G E+ A +IV
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV 258
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 84.9 bits (211), Expect = 5e-19
Identities = 49/238 (20%), Positives = 87/238 (36%), Gaps = 31/238 (13%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE----YNPINEVTLV 101
+KV IITG+S+ IG A +A+ A + + R RL+ T + V V
Sbjct: 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLE-ETRQQILAAGVSEQNVNSV 63
Query: 102 SLNNKESKAVDHLVNTA-----------------SLGHTFFFEEVTDTSIFPRLLDINFW 144
+ D +++T + L++N
Sbjct: 64 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123
Query: 145 GNVYPTFVALPYLHESNGRVVVNASVENWL-PLPRMSLYASAKAALVTFYESLRFELNDE 203
+ T A+P+L + G +V +S+ + L P Y+ AKAA+ + + +L
Sbjct: 124 SVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQH 183
Query: 204 VGITI-ATH-GWIGIEMTKGKFMLEDGAEM---QWKEEREVHVAG--GPVEDFARLIV 254
GI + + G + M E+ ++ +E AG G +D A +I
Sbjct: 184 -GIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA 240
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 6e-19
Identities = 55/243 (22%), Positives = 86/243 (35%), Gaps = 27/243 (11%)
Query: 32 GCEWLYNNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE 91
G E LY ++ + K+ +ITGA+S IG A + A + + RR++ L + I E
Sbjct: 14 GTENLYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLD-AAIAE 72
Query: 92 YNPINEVTLVSLNNKESKAVDH--------------LVNTASLGHTFFFEEVTDTSIFPR 137
+ ++ +D L A G EVT+ +
Sbjct: 73 IGG--GAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQ-YDD 129
Query: 138 LLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLR 197
D N G ++ ALP L VV+ S P S+YA++KAAL +F +
Sbjct: 130 TFDRNVKGVLFTVQKALPLLARG-SSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWI 188
Query: 198 FELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVA----GGPVEDFAR 251
+L D GI I G + + V G E+ A
Sbjct: 189 LDLKDR-GIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRA-EEVAA 246
Query: 252 LIV 254
+
Sbjct: 247 AAL 249
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 9e-19
Identities = 56/232 (24%), Positives = 76/232 (32%), Gaps = 29/232 (12%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE 107
KV ++TGASS G IA ++ ARR L + Y E + + + E
Sbjct: 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD-DLVAAYPDRAEAISLDVTDGE 64
Query: 108 S--KAV----------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155
D LVN A FEE T+ + L +++ +G T LP
Sbjct: 65 RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELR-DLFELHVFGPARLTRALLP 123
Query: 156 YLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI-------- 206
+ E G VV +S L S Y++ KAAL E L E+ GI
Sbjct: 124 QMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEV-APFGIKVLIVEPG 182
Query: 207 TIATHGWIGIEMTKGKFMLEDGAEMQWKEEREV----HVAGGPVEDFARLIV 254
T G AE + V G A I
Sbjct: 183 AFRT-NLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIR 233
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 1e-18
Identities = 50/239 (20%), Positives = 90/239 (37%), Gaps = 31/239 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLV 101
++ + V ++TG SS IG + A + AR RL+ S + + P +
Sbjct: 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64
Query: 102 SLNNKESKAVDH--------------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ ++ V LVN A G F E TD + + L + F+ +
Sbjct: 65 VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEA-WSEELQLKFFSVI 123
Query: 148 YPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+P LP L + +V S+ P P M ++A+A + S+ FE + G+
Sbjct: 124 HPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPK-GV 182
Query: 207 T---IATHGWIGIEMTKGKFMLEDGAEMQWKEE--REVHVAGGPV------EDFARLIV 254
I G + + +F + E+ W + + P+ + AR I+
Sbjct: 183 RVNGILI-GLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAIL 240
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 1e-18
Identities = 54/242 (22%), Positives = 84/242 (34%), Gaps = 42/242 (17%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT------ 99
KV +ITG+SS IG IA +AK A++VLVAR+ +RL + E
Sbjct: 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLH-EAARS---LKEKFGVRVLE 61
Query: 100 -------------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
+V D LVN A G E D + ++
Sbjct: 62 VAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAAD-EKWQFYWELLVMAA 120
Query: 147 VYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
V +P + G ++ NAS+ PL +Y KAAL+ F ++L E+ +
Sbjct: 121 VRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKD-N 179
Query: 206 IT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG----------GPVEDFARL 252
I I G I ++ + + + + E+ A
Sbjct: 180 IRVNCINP-GLILTPDWIK--TAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF 236
Query: 253 IV 254
V
Sbjct: 237 FV 238
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 1e-18
Identities = 37/235 (15%), Positives = 78/235 (33%), Gaps = 31/235 (13%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN- 104
+V +ITG +S +G + + A + ++ + RL+ + V +
Sbjct: 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLR-ELEVAHGG--NAVGVVGDV 60
Query: 105 -NKES------KAVDH------LVNTASLGHTFFF----EEVTDTSIFPRLLDINFWGNV 147
+ + + + L+ A + E + F + +N G +
Sbjct: 61 RSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYI 120
Query: 148 YPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
+ LP L S G VV S + P LY + K A+V + FEL +
Sbjct: 121 HAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP--HVR 178
Query: 208 I-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPV------EDFARLIV 254
+ G + ++ + + ++ + P+ E++ V
Sbjct: 179 VNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYV 233
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 2e-18
Identities = 47/240 (19%), Positives = 85/240 (35%), Gaps = 34/240 (14%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLV 101
++ K ++TG+++ IG+ IA AN+++ RRE + I P + V
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 102 SLNN----------KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
+ ++ VD L+N + + ++ D + +L ++N V T
Sbjct: 67 VADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPD-EDWFKLFEVNIMSGVRLTR 125
Query: 152 VALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT--- 207
L + E GRV+ AS +P M+ Y++ K ++ SL +T
Sbjct: 126 SYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGT-NVTVNT 184
Query: 208 IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG-------------GPVEDFARLIV 254
I G E + ML + E E+ A L+
Sbjct: 185 IMP-GSTLTEGVET--MLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVT 241
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 2e-18
Identities = 42/235 (17%), Positives = 79/235 (33%), Gaps = 44/235 (18%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------ 97
++ +V ++TGAS IG IA + A +VL AR +L+ + E I
Sbjct: 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLR-AVERE---IVAAGGEAE 81
Query: 98 -----VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINF 143
++ + D LVN A G +F + + L+ +N
Sbjct: 82 SHACDLSHSDAIAAFATGVLAAHGRCDVLVNNA--GVGWFGGPLHTMKPAEWDALIAVNL 139
Query: 144 WGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
P + + ++N +S+ P+ + Y ++K L S EL
Sbjct: 140 KAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQ 199
Query: 203 EVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ +A G + E G ++ + +D A ++
Sbjct: 200 H-QVRVSLVAP-GSVRTEFGVG------------LSAKKSALGAIEPDDIADVVA 240
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 2e-18
Identities = 44/237 (18%), Positives = 78/237 (32%), Gaps = 49/237 (20%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKAN-------LVLVARRENRLQGSTIDEYNPINE-- 97
+++ITGA IG IA E+A+ + LVL +R L+ E
Sbjct: 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLE-KISLE---CRAEG 57
Query: 98 ---------VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDI 141
++ L + + +D LVN A +G ++T+ F ++
Sbjct: 58 ALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEED-FDYTMNT 116
Query: 142 NFWGNVYPTFVALPYLHE-SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
N G + T + +G + SV S+Y +K E++R
Sbjct: 117 NLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYA 176
Query: 201 NDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ + G + M ++D E+ ED A +V
Sbjct: 177 RKC-NVRITDVQP-GAVYTPMWGK---VDD----------EMQALMMMPEDIAAPVV 218
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 3e-18
Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 32/208 (15%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-----EVT 99
+ D+++++TGAS IG + A YA+ A ++L+ R E +L+ IN +
Sbjct: 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLR-QVASH---INEETGRQPQ 65
Query: 100 LVSLNNKESKA----------------VDHLVNTAS-LGHTFFFEEVTDTSIFPRLLDIN 142
L+ + +D +++ A LG E ++ ++ +N
Sbjct: 66 WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNP-QVWQDVMQVN 124
Query: 143 FWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201
T LP L +S G +V +S YA++K A + L E
Sbjct: 125 VNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY- 183
Query: 202 DEVGITI-ATH-GWIGIEMTKGKFMLED 227
+ + + + G M F ED
Sbjct: 184 -QQRLRVNCINPGGTRTAMRASAFPTED 210
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 3e-18
Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 27/212 (12%)
Query: 41 YSENM---EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE----YN 93
YS + + +V+++TGA+ IG A YA A++VL+ R E L D+
Sbjct: 5 YSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLA-EVSDQIKSAGQ 63
Query: 94 PINEVTLVSLNNKESKAVDHLVNTAS---------------LGHTFFFEEVTDTSIFPRL 138
P + ++L N ++ L +G E++ D F ++
Sbjct: 64 PQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPD-EDFMQV 122
Query: 139 LDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLR 197
+ +N T LP L S + + +S Y +K A ++L
Sbjct: 123 MHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLA 182
Query: 198 FELNDEVGITI-ATH-GWIGIEMTKGKFMLED 227
EL + + + G M + E+
Sbjct: 183 DELEGVTAVRANSINPGATRTGMRAQAYPDEN 214
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 4e-18
Identities = 44/237 (18%), Positives = 84/237 (35%), Gaps = 33/237 (13%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVS- 102
+ K+ ++T SS +G A E A+ A L+L +R +L+ S I +V +V+
Sbjct: 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65
Query: 103 -LNNKESKA-----------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+ D LV + F E+ + + V+
Sbjct: 66 DIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGV-EDWDESYRLLARSAVWVG 124
Query: 151 FVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT-- 207
A + E GR+V SV P ++L + ++ +L EL G+T
Sbjct: 125 RRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPH-GVTVN 183
Query: 208 -IATHGWIGIEMTKGKFMLEDGAEMQ---WKEEREVHVAGGPV------EDFARLIV 254
+ I + + + E+ A +E + + P+ E+ A ++
Sbjct: 184 AVLP-SLILTDRVRS--LAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVA 237
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 4e-18
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+ DK V++ AS IG +A ++ A + + AR E L+ + Y + + L
Sbjct: 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK-RSGHRYVVCDLRKDLDL 74
Query: 104 NNKESKAVDHLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN 161
++ K VD LV A G FF+E+T+ F +D F + LP + E
Sbjct: 75 LFEKVKEVDILVLNA--GGPKAGFFDELTNED-FKEAIDSLFLNMIKIVRNYLPAMKEKG 131
Query: 162 -GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---IATHGWIGIE 217
GR+V S P+ + SA+ AL F ++L FE+ GIT +A GW E
Sbjct: 132 WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPY-GITVNCVAP-GWTETE 189
Query: 218 MTKGKFMLEDGAEMQWKEEREVHV-AG--GPVEDFARLIV 254
K +L + K++ E + E+ A ++
Sbjct: 190 RVKE--LLSEEK----KKQVESQIPMRRMAKPEEIASVVA 223
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 5e-18
Identities = 45/236 (19%), Positives = 86/236 (36%), Gaps = 33/236 (13%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPIN---EVT 99
++ +V I+TG ++ IG+ I E + +N+V+ +R+ RL+ + P V
Sbjct: 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 100 LVSLNNKESKAV--------------DHLVNTASLGHTFF--FEEVTDTSIFPRLLDINF 143
+ N + + V + LVN G F E ++ + +L+ N
Sbjct: 76 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNG--GGQFLSPAEHISSKG-WHAVLETNL 132
Query: 144 WGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
G Y + +G +VN V P +A+A + +SL E
Sbjct: 133 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACS 192
Query: 204 VGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
GI +A G I + + ++ + A G E+ + ++
Sbjct: 193 -GIRINCVA-PGVIYSQTAVEN--YGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVC 244
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 81.3 bits (201), Expect = 2e-17
Identities = 38/178 (21%), Positives = 63/178 (35%), Gaps = 22/178 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE-----V 98
M K+++ITGASS G A A + R S ++ +
Sbjct: 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDL 61
Query: 99 TLVSL--NNKES--KAVDH----------LVNTASLGHTFFFEEVTDTSIFPRLLDINFW 144
+ L ++ S +A+D L++ A E T L DIN
Sbjct: 62 RTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFA-ELYDINVL 120
Query: 145 GNVYPTFVALPYLHES-NGRVVVNASVENWLPL-PRMSLYASAKAALVTFYESLRFEL 200
ALP++ +G ++ +S + P ++ Y +AKAA+ EL
Sbjct: 121 STQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYAREL 178
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 7e-17
Identities = 43/217 (19%), Positives = 73/217 (33%), Gaps = 26/217 (11%)
Query: 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI-NEV 98
F + + DKV ITG S IG +IA + + + V+ +R R+ +
Sbjct: 20 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 79
Query: 99 TLVSLNNKESKAV--------------DHLVNTASLGHTFF--FEEVTDTSIFPRLLDIN 142
+S++ + AV D L+N A F ++ + F ++DI+
Sbjct: 80 LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCA--AGNFLCPAGALSFNA-FKTVMDID 136
Query: 143 FWGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201
G + V +G V+VN + SAKAA+ L E
Sbjct: 137 TSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWG 196
Query: 202 DEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKE 235
+ I +A G I + +
Sbjct: 197 PQ-NIRVNSLAP-GPISGTEGLRRLGGPQASLSTKVT 231
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 3e-16
Identities = 32/227 (14%), Positives = 77/227 (33%), Gaps = 31/227 (13%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-----------NPIN 96
++TG S IG+ + + K + V+ + + N ++
Sbjct: 5 ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLD 64
Query: 97 EVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156
+ ++ + D + A + ++ ++LD+N W ++Y
Sbjct: 65 II--------KNVSFDGIFLNAGILIKGSIFDIDI-ESIKKVLDLNVWSSIYFIKGLENN 115
Query: 157 LHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI-ATH-GWI 214
L +V N S + ++ P Y +K A+ +SL +L I + G +
Sbjct: 116 LKVG-ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKY-QIRVNTVCPGTV 173
Query: 215 GIEMTKGKFMLEDGAEMQWKEE-REVHVAGGPV------EDFARLIV 254
++ + +E ++ P+ ++ A L++
Sbjct: 174 DTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVI 220
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 3e-16
Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 30/235 (12%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN----EV 98
+++++KVVI+TGA S IG IA ++A + +V V E+RL + E + EV
Sbjct: 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLN-QIVQE---LRGMGKEV 58
Query: 99 TLVSLNNKESKAVDHLVNTA-----SL-------GHTFFFEEVTDTSI--FPRLLDINFW 144
V + + K V+ V + G V + S + R+L +N +
Sbjct: 59 LGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLY 118
Query: 145 GNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
Y + +P + + V+VN AS+ + Y AK L+ S+ D+
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQ 178
Query: 204 VGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
GI A G + + G + + + ++ ED A +IV
Sbjct: 179 -GIRAVAVLPGTVKTNIGLG--SSKPSELGMRTLTKLMSLSSRLAEPEDIANVIV 230
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 4e-16
Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 37/223 (16%)
Query: 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI--NE 97
+ + KV ITG + +G+ + + A V+ +R+ + L+ +T ++ + N+
Sbjct: 19 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK-ATAEQISSQTGNK 77
Query: 98 VTLVSLNNKESKAV--------------DHLVNTASLGHTFF--FEEVTDTSIFPRLLDI 141
V + + ++ V + ++N A F E ++ + + + DI
Sbjct: 78 VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNA-WKTITDI 134
Query: 142 NFWGNVYPTF-----VALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYES 195
G T + + G ++ ++ + ASAKA + +S
Sbjct: 135 VLNG----TAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKS 190
Query: 196 LRFELNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKE 235
L E G+ I G I + + E +
Sbjct: 191 LAAEWGKY-GMRFNVIQP-GPIKTKGAFSRLDPTGTFEKEMIG 231
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 4e-16
Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 33/234 (14%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI----NEVTLV 101
+D+ ++TG S IG+ +A A++++V R ++L + E + +
Sbjct: 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLA-GAVQELEALGANGGAIRYE 68
Query: 102 SLNNKESKAV--------------DHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWG 145
+ +V+ A G + +T + R +D+N G
Sbjct: 69 PTDITNEDETARAVDAVTAWHGRLHGVVHCA--GGSENIGPITQVDSEAWRRTVDLNVNG 126
Query: 146 NVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEV 204
+Y A + G V +S+ Y K+A+ + EL
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGAS- 185
Query: 205 GITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ + + G I ++ + E G VED A + +
Sbjct: 186 WVRVNSIRPGLIRTDLVAA--ITESAELSSDYAMC--TPLPRQGEVEDVANMAM 235
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 75.6 bits (187), Expect = 6e-16
Identities = 44/208 (21%), Positives = 87/208 (41%), Gaps = 24/208 (11%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
+E+KV ++T ++ IG IA A+ A++V+ +R++ + T+ VT
Sbjct: 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVD-RTVATLQGEGLSVTGTV 69
Query: 103 LNNKESKAVDHLV---------------NTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ +++ + LV N A + T+ ++ ++L +N V
Sbjct: 70 CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATE-EVWDKILHVNVKATV 128
Query: 148 YPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
T +P + + G V+ +SV + P P + Y +K AL+ ++L EL I
Sbjct: 129 LMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR-NI 187
Query: 207 T---IATHGWIGIEMTKGKFMLEDGAEM 231
+A G I ++ +M + E
Sbjct: 188 RVNCLAP-GLIKTNFSQVLWMDKARKEY 214
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 6e-16
Identities = 45/234 (19%), Positives = 85/234 (36%), Gaps = 24/234 (10%)
Query: 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT 99
F S ++ +V I+TG S IG A +AK A +V+ E+ +E +
Sbjct: 20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAV-RVANEIGS--KAF 76
Query: 100 LVSLN--NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWG 145
V ++ + + K LVN A G T + + + R++ +N G
Sbjct: 77 GVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPE-ETWDRIMSVNVKG 135
Query: 146 NVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEV 204
+ +P + + G ++N S + + Y ++K A+ + ++ + E
Sbjct: 136 IFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKE- 194
Query: 205 GITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
GI + A G I F + V G E+ A ++
Sbjct: 195 GIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAML 248
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 7e-16
Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 25/229 (10%)
Query: 31 NGCEWLYNNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID 90
+G + N Y ++M K +ITG++S IG IA AK AN+VL + D
Sbjct: 9 SGVDLGTENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD 68
Query: 91 EYNPINEVT----------------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI 134
E ++ T ++++ D LVN A + E+
Sbjct: 69 EVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPV-EQ 127
Query: 135 FPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFY 193
+ R++ +N + + A+P + + GR++ AS + P S Y +AK ++
Sbjct: 128 WDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLT 187
Query: 194 ESLRFELNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREV 239
+++ E+ + G+T I G++ + + + D A + E +V
Sbjct: 188 KTVALEVAES-GVTVNSICP-GYVLTPLVEK--QIPDQARTRGITEEQV 232
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 1e-15
Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 20/172 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKA---NLVLVARRE---NRLQGSTIDEYNPINEVTLV 101
VV+ITG SS IG +A A + + R RL + P + +
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 102 SL--NNKES--KAVDH--------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
L + +S A + LV A LG E + + ++ +LD+N G V
Sbjct: 63 QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVA-SVLDVNVVGTVRM 121
Query: 150 TFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
LP + GRV+V SV + LP +Y ++K AL ESL L
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 1e-15
Identities = 39/188 (20%), Positives = 62/188 (32%), Gaps = 25/188 (13%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT---- 99
++ K + I+G S IG IA A AN+ LVA+ Y E+
Sbjct: 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65
Query: 100 -----------------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDIN 142
V+ ++ +D VN AS + EE F + I
Sbjct: 66 QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEE-VPLKRFDLMNGIQ 124
Query: 143 FWGNVYPTFVALPYLHES-NGRVVVNASVENWLP-LPRMSLYASAKAALVTFYESLRFEL 200
G + +P++ N ++ + P R + Y AK + + EL
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184
Query: 201 NDEVGITI 208
D GI
Sbjct: 185 RDA-GIAS 191
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 2e-15
Identities = 46/229 (20%), Positives = 87/229 (37%), Gaps = 27/229 (11%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN- 104
KVV++TG IG I + A +V+ + E+ + + E + + +
Sbjct: 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR-ALEQE---LPGAVFILCDV 63
Query: 105 -NKES------KAVDH------LVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYP 149
++ + + +VN A GH + +TS F +LL++N G
Sbjct: 64 TQEDDVKTLVSETIRRFGRLDCVVNNA--GHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121
Query: 150 TFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI- 208
T +ALPYL +S G V+ +S+ + + Y + K A+ ++L + + G+ +
Sbjct: 122 TKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPY-GVRVN 180
Query: 209 ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
G I + + L +E G G + V
Sbjct: 181 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAV 229
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 3e-15
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 26/208 (12%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
+E KV +ITGA S GE +A +AK A +V+V R + + E V+ +
Sbjct: 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAE-RVAGEIGD--AALAVAAD 63
Query: 105 --NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+ A+ LVN A +GH E+ + F R++ +N G T
Sbjct: 64 ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 151 FVALPYLHE----SNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
+P+ E V++N AS P P ++ Y + K +V+ ++L EL
Sbjct: 124 SKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA-K 182
Query: 206 ITI-ATH-GWIGIEMTKGKFMLEDGAEM 231
I + A + + FM ED E+
Sbjct: 183 IRVVALNPVAGETPLLT-TFMGEDSEEI 209
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 3e-15
Identities = 46/252 (18%), Positives = 74/252 (29%), Gaps = 50/252 (19%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT---- 99
+ K + ITGAS IG IA A+ AN+ + A+ ++ V
Sbjct: 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62
Query: 100 ---LVSLNNKESKAVDH--------------LVNTASLGHTFFFEEVTDTSIFPRLLDIN 142
+ + +E V LVN AS + T F + +N
Sbjct: 63 QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLD-TPMKRFDLMQQVN 121
Query: 143 FWGNVYPTFV----ALPYLHES-NGRVVVNASVENWLP--LPRMSLYASAKAALVTFYES 195
G +FV LP+L ++ N ++ A + P + Y AK +
Sbjct: 122 ARG----SFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLG 177
Query: 196 LRFELNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARL 252
L E + G+ + I + ML E A
Sbjct: 178 LAAEFGPQ-GVAINALWPRTVIATDAIN---MLPGVDAAAC----------RRPEIMADA 223
Query: 253 IVSGACRGDTYV 264
+ R
Sbjct: 224 AHAVLTREAAGF 235
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 4e-15
Identities = 46/240 (19%), Positives = 81/240 (33%), Gaps = 44/240 (18%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------ 97
+ E ++ ++TG + +G IA + ++V+ RR + L + E I
Sbjct: 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLD-AAAGE---IGGRTGNIV 85
Query: 98 ------VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDIN 142
V L + E +D LVN A G + + + + ++ N
Sbjct: 86 RAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNA--GSNVPPVPLEEVTFEQWNGIVAAN 143
Query: 143 FWGNVYPTFVALPYLHESN---GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
G T A + GR++ N S+ P P + Y + K A+ +S +
Sbjct: 144 LTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALD 203
Query: 200 LNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
I I G +MT + G + A P+E A +V
Sbjct: 204 GRMH-DIACGQIDI-GNAATDMTAR---MSTGV----LQANGEVAAEPTIPIEHIAEAVV 254
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 5e-15
Identities = 46/243 (18%), Positives = 96/243 (39%), Gaps = 42/243 (17%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVT 99
+ + KV ++TGA+ IG A + A + LV + + E +
Sbjct: 2 AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL 61
Query: 100 LVSLN--NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWG 145
+ + +++ K VDH LVN A G V + + + L IN
Sbjct: 62 FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNA--G-------VNNEKNWEKTLQINLVS 112
Query: 146 NVYPTFVALPYLHESN---GRVVVN-ASVENWLPLPRMSLYASAKAALVTFYES--LRFE 199
+ T++ L Y+ + N G +++N +S+ +P+ + +Y ++K +V F S L
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 172
Query: 200 LNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG------GPVEDFAR 251
L + G+ + A G++ + + + ++ Q+ E ++ A
Sbjct: 173 LMNS-GVRLNAICPGFVNTAILES--IEKEENMGQYIEYKDHIKDMIKYYGILDPPLIAN 229
Query: 252 LIV 254
++
Sbjct: 230 GLI 232
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 7e-15
Identities = 47/240 (19%), Positives = 89/240 (37%), Gaps = 48/240 (20%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-------------------NRL 84
++ DKVVI+TGAS IG IA + + ++ ++ +
Sbjct: 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKAS 64
Query: 85 QGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFW 144
EY I LVN A + E ++ + R++D+N +
Sbjct: 65 IDHIFKEYGSI----------------SVLVNNAGIESYGKIESMSM-GEWRRIIDVNLF 107
Query: 145 GNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
G Y + A+PY+ S +VN +SV+ + S Y ++K A++ +S+ +
Sbjct: 108 GYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP- 166
Query: 204 VGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG-------GPVEDFARLIV 254
+ A I + + LE G++ E++ G ++ A +
Sbjct: 167 -LLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVA 225
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 1e-14
Identities = 47/235 (20%), Positives = 79/235 (33%), Gaps = 28/235 (11%)
Query: 39 NFYSENM---EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI 95
N Y ++M E KV ++TGA+ IG + A + + R + +
Sbjct: 17 NLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGD-- 74
Query: 96 NEVT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ L +D +VN A + E TD + L +N
Sbjct: 75 --LREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDAD-WSLSLGVNVEAPFR 131
Query: 149 PTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
A+P + + G +VN AS P P +LY KAAL + + + + + GI
Sbjct: 132 ICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQ-GIR 190
Query: 208 I-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPV------EDFARLIV 254
I A + M + P+ ED A +++
Sbjct: 191 INAVCPNEVNTPMLRT---GFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVL 242
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 2e-14
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 32/205 (15%)
Query: 40 FYSENM--EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE 97
F S+N+ + K IITGA + IG++IA +A A++V+ + +DE I +
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVVDE---IQQ 57
Query: 98 -----------VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLL 139
+T L + VD LVN A G F+ + F R
Sbjct: 58 LGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFD--MPMADFRRAY 115
Query: 140 DINFWGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRF 198
++N + + + + P + ++ G V++ S+ M+ YAS+KAA ++ F
Sbjct: 116 ELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAF 175
Query: 199 ELNDEVGIT---IATHGWIGIEMTK 220
+L ++ I IA G I + K
Sbjct: 176 DLGEK-NIRVNGIAP-GAILTDALK 198
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 2e-14
Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 22/179 (12%)
Query: 38 NNFYSENM--EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR------------ 83
N ++ +M ++ITGAS +G A + +++ R E+
Sbjct: 16 NLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVA 75
Query: 84 LQGSTIDEYNPINEV-TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDIN 142
L G E + + L ++ ++ +V+ AS + F R+ ++
Sbjct: 76 LYGDFSCE----TGIMAFIDLLKTQTSSLRAVVHNASE--WLAETPGEEADNFTRMFSVH 129
Query: 143 FWGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
P L S +V+ + + Y + KA L + S
Sbjct: 130 MLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARF 188
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 70.6 bits (174), Expect = 4e-14
Identities = 47/233 (20%), Positives = 90/233 (38%), Gaps = 26/233 (11%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
+++ ++TG S IG I E A A + +R E L ++ + V
Sbjct: 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD-ECLEIWREKGLNVEGSV 76
Query: 103 LN--NKES--KAVDH-----------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ ++ K + LVN A + ++ T+ + ++ NF
Sbjct: 77 CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE-KDYNIIMGTNFEAAY 135
Query: 148 YPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+ + +A P L S NG V+ +S+ + LP +SLY+++K A+ +SL E + I
Sbjct: 136 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKD-NI 194
Query: 207 T---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+A G I + + + + G G ++ + LI
Sbjct: 195 RVNSVAP-GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA 246
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 6e-14
Identities = 52/247 (21%), Positives = 87/247 (35%), Gaps = 36/247 (14%)
Query: 39 NFYSENM---EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI 95
N Y ++M V +ITGA S IG A A + + R ++ DE I
Sbjct: 17 NLYFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVE-EVADE---I 72
Query: 96 N----EVTLVSLNNKESKAVDHLVNTA-----SL-------GHTFFFEEVTDTSI--FPR 137
+ + + + + + V L G + + D +
Sbjct: 73 VGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDE 132
Query: 138 LLDINFWGNVYPTFVALPYLHESN-GRVVVNASV--ENWLPLPRMSLYASAKAALVTFYE 194
+ +N G + +PYL + G +VV +S+ P + Y + KAA V +
Sbjct: 133 TIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQ 192
Query: 195 SLRFELNDEVGITI-ATH-GWIGIEMTKG---KFMLEDGAEMQWKEEREVHVAG--GPVE 247
L EL I + A G I ++ + E ++W + + G G E
Sbjct: 193 QLALELGKH-HIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSE 251
Query: 248 DFARLIV 254
D A LI
Sbjct: 252 DVAELIR 258
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 7e-14
Identities = 48/239 (20%), Positives = 91/239 (38%), Gaps = 36/239 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
++ + I+TG S IG IA K A + + Q + + V +
Sbjct: 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQ-AVVAGLENGGFAVEVDV 67
Query: 104 NNKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDIN----FWGN- 146
+ S KA+D L A + ++TD + D+N F N
Sbjct: 68 TKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITD-EEWDFNFDVNARGVFLANQ 126
Query: 147 -VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
F+A + G +V AS+ + P ++ Y+++K A+ + ++L E+ +
Sbjct: 127 IACRHFLA----SNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPK-N 181
Query: 206 IT---IATHGWIGIEMTKGKFMLEDGAEMQWKEE-REVHVAGGPV------EDFARLIV 254
I + G++ M + + + E E R +V+ P+ ED A ++V
Sbjct: 182 IRVNCVCP-GFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVV 239
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 69.4 bits (171), Expect = 7e-14
Identities = 45/234 (19%), Positives = 86/234 (36%), Gaps = 29/234 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
N+E ++TG S IG I E A A++ +R + L + ++ +V
Sbjct: 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN-DCLTQWRSKGFKVEASV 64
Query: 103 LNNKESKAVDH---------------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ LVN A + ++ T + ++ INF
Sbjct: 65 CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTV-EDYSLIMSINFEAAY 123
Query: 148 YPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+ + +A P+L S G VV +SV L +P ++Y + K A+ L FE + I
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD-NI 182
Query: 207 T---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHV-AG--GPVEDFARLIV 254
+ G I + + ++D + + + G ++ A ++
Sbjct: 183 RVNGVGP-GVIATSLVEM--TIQDPEQKENLNKLIDRCALRRMGEPKELAAMVA 233
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 69.4 bits (171), Expect = 8e-14
Identities = 42/223 (18%), Positives = 87/223 (39%), Gaps = 17/223 (7%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
++ KV+I+T A+ IG+ A +A+ A ++ E++LQ +++Y I L
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQ--ELEKYPGIQTRVLDVTK 61
Query: 105 NKESKA-------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL 157
K+ +D L N A H + + + +++N LP +
Sbjct: 62 KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEE-KDWDFSMNLNVRSMYLMIKAFLPKM 120
Query: 158 HESNGRVVVN-ASVENWL-PLPRMSLYASAKAALVTFYESLRFELNDEVGITI-ATH-GW 213
++N +SV + + + +Y++ KAA++ +S+ + + GI G
Sbjct: 121 LAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ-GIRCNCVCPGT 179
Query: 214 IGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ + + E + + G E+ A L V
Sbjct: 180 VDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCV 222
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 8e-14
Identities = 51/234 (21%), Positives = 82/234 (35%), Gaps = 31/234 (13%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN----EVTL 100
+E K+ I+TGASS IG A +A+ A +V+ AR N L DE I E
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALA-ELTDE---IAGGGGEAAA 61
Query: 101 VSLNNKESKAVDHLVNTA-----SL-------GHTFFFEEVTDTSI--FPRLLDINFWGN 146
++ + + + LV A L G E++ S+ + LD N
Sbjct: 62 LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSA 121
Query: 147 VYPTFVALPYLHESNGRVVVN-ASVENWL-PLPRMSLYASAKAALVTFYESLRFELNDEV 204
+P + G + +S ++ YA++KA L+ ++L EL
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGAR- 180
Query: 205 GITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
GI + A G + E H E+ A +
Sbjct: 181 GIRVNALLPGGTDTPANFANLPGAAPETRGFVEGL--HALKRIARPEEIAEAAL 232
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 1e-13
Identities = 50/225 (22%), Positives = 81/225 (36%), Gaps = 22/225 (9%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL-VS 102
N ++TGA IG A +V V R + L S E I V + +
Sbjct: 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV-SLAKECPGIEPVCVDLG 62
Query: 103 LNNKESKAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156
+ KA+ LVN A+L F EVT + F R +N + +
Sbjct: 63 DWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEA-FDRSFSVNLRSVFQVSQMVARD 121
Query: 157 LHE--SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---IATH 211
+ G +V +S+ + P + Y+S K A+ +++ EL I +
Sbjct: 122 MINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNP- 179
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ +M K + D + +ER H VED I+
Sbjct: 180 TVVLTDMGKK--VSADPEFARKLKER--HPLRKFAEVEDVVNSIL 220
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 1e-13
Identities = 42/239 (17%), Positives = 80/239 (33%), Gaps = 35/239 (14%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------- 97
M +V ++TGAS IG IA + K A + + R + L+ E
Sbjct: 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLR-VVAQE---AQSLGGQCVP 58
Query: 98 ----VT-------LVSLNNKESK-AVDHLVNTASLGHTFFFEEV------TDTSIFPRLL 139
+ L ++E + +D LVN A G T S++ +
Sbjct: 59 VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN 118
Query: 140 DINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
++ G+ + + + + ++V S L Y KAA E
Sbjct: 119 NVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAADCAHE 178
Query: 200 LNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVA-GGPVEDFARLIV 254
L G++ + G + E+ K E+ + ++ + + E + +V
Sbjct: 179 LRRH-GVSCVSLWP-GIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVV 235
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 2e-13
Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 23/226 (10%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT------ 99
DKV I+TG SS IG + + A +V V+ E D + +VT
Sbjct: 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN-VSDHFK--IDVTNEEEVK 69
Query: 100 -LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLH 158
V K+ +D LVN A + I+ R++D+N G+ +P +
Sbjct: 70 EAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPT-EIWRRIIDVNVNGSYLMAKYTIPVML 128
Query: 159 ESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI-ATH-GWIG 215
++N ASV+++ + Y ++K AL+ S+ + I A G I
Sbjct: 129 AIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP--KIRCNAVCPGTIM 186
Query: 216 IEMTKGKFMLEDGAEMQWKEE-----REVHVAG--GPVEDFARLIV 254
M +E G + E H G G E+ A ++
Sbjct: 187 TPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVA 232
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 2e-13
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 28/183 (15%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLV-------------------ARRENRLQG 86
+D+ ++TG S IG A YA+ A++ + R+ L G
Sbjct: 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPG 107
Query: 87 STIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFW 144
D + +LV + +D L A G E+ D + F + +N +
Sbjct: 108 ---DLSDESFARSLVHKAREALGGLDILALVA--GKQTAIPEIKDLTSEQFQQTFAVNVF 162
Query: 145 GNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEV 204
+ T A+P L + ++ +S++ + P P + YA+ KAA++ + L ++ ++
Sbjct: 163 ALFWITQEAIPLLPKG-ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK- 220
Query: 205 GIT 207
GI
Sbjct: 221 GIR 223
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 2e-13
Identities = 46/213 (21%), Positives = 81/213 (38%), Gaps = 26/213 (12%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLV------------LVARRENR------ 83
+ ++ KV ++TGAS IG IA A A + V ++
Sbjct: 2 NSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFS 61
Query: 84 LQGSTIDEYNP---INEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLD 140
+ + + + + N S D L+N A +G F EE T+ F R++
Sbjct: 62 IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQF-FDRMVS 120
Query: 141 INFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+N + AL L ++ R++ +S + LP Y+ K A+ T +L +L
Sbjct: 121 VNAKAPFFIIQQALSRLRDN-SRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQL 179
Query: 201 NDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEM 231
GIT+ A G++ +M +
Sbjct: 180 GAR-GITVNAILPGFVKTDMNAELLSDPMMKQY 211
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 2e-13
Identities = 51/235 (21%), Positives = 80/235 (34%), Gaps = 28/235 (11%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVS 102
D+VV+ITG S +G A A A L LV L+ + + E P EV
Sbjct: 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70
Query: 103 LNNKESKAVDHLVNTA-----SL-------GHTFFFEEVTDTSI--FPRLLDINFWGNVY 148
+ + V+ V + G + F +++ IN G
Sbjct: 71 ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130
Query: 149 PTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
L + E +VVN ASV + S YA+AK +V + E GI
Sbjct: 131 GLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRY-GIR 189
Query: 208 I-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPV------EDFARLIV 254
I A G I M + ++ ++ E + P + A ++
Sbjct: 190 INAIAPGAIWTPMVEN--SMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVA 242
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 2e-13
Identities = 42/233 (18%), Positives = 89/233 (38%), Gaps = 32/233 (13%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
++ KV IITG + IG IA ++ + A +++ R + + +++ +
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE-KAAKSVGTPDQIQFFQHD 62
Query: 105 --NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDIN----FWGN 146
+++ LVN A + EE T + +LL +N F+G
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAE-WRKLLAVNLDGVFFGT 121
Query: 147 VYPTFVALPYLHES-NGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDE 203
+ + G ++N +S+E ++ P + Y ++K A+ +S + +
Sbjct: 122 RL----GIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKD 177
Query: 204 VGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ + H G+I + + M + + + G P D A + V
Sbjct: 178 YDVRVNTVHPGYIKTPLVDD--LPGAEEAMSQRTKTPMGHIGEP-NDIAYICV 227
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 2e-13
Identities = 47/240 (19%), Positives = 86/240 (35%), Gaps = 38/240 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+E K +ITG++ IG A Y + A + + R + E P V +
Sbjct: 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERAR-QAAAEIGP--AAYAVQM 61
Query: 104 N--NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDIN----FWG 145
+ ++S V+H LVN A+L E+T S + +L IN +
Sbjct: 62 DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES-YEKLFAINVAGTLFT 120
Query: 146 N--VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
+A G+++ AS +++Y + KAA+++ +S +L
Sbjct: 121 LQAAARQMIA----QGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKH 176
Query: 204 VGITI-ATH-GWIGIEMTKG-KFMLEDGAEMQWKEEREVHVAGGPV------EDFARLIV 254
I + A G + E G + E++ + P ED + +
Sbjct: 177 -RINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAI 235
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 2e-13
Identities = 48/225 (21%), Positives = 85/225 (37%), Gaps = 21/225 (9%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN 105
K V++TG + IG IA +A+ A + L R + + + +
Sbjct: 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE--VAEAIGGAFFQVDLE-DE 61
Query: 106 KESKA-----------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVAL 154
+E VD LVN A++ V + R+L++N ++ + +A
Sbjct: 62 RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRL-PEWRRVLEVNLTAPMHLSALAA 120
Query: 155 PYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI-ATH- 211
+ + G +VN ASV+ + Y ++K LV SL +L I + A
Sbjct: 121 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPL-RIRVNAVAP 179
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
G I E L E ++ ++H G E+ A ++
Sbjct: 180 GAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL 224
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 4e-13
Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 25/215 (11%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT----- 99
++ KV ++TG++S IG IA A + A++VL + + V
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 100 -----------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
LV ++ +D LVN A + HT E+ + +L +N +
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT-EKWDAILALNLSAVFH 120
Query: 149 PTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
T ALP++ + GR++ AS + S Y +AK +V F + E + GIT
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ-GIT 179
Query: 208 ---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREV 239
I GW+ + + + AE ++
Sbjct: 180 ANAICP-GWVRTPLVEK--QISALAEKNGVDQETA 211
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 67.1 bits (165), Expect = 4e-13
Identities = 47/228 (20%), Positives = 83/228 (36%), Gaps = 28/228 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+ + V++TGA IG A +V V+R + L S + E + V +
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD-SLVRE---CPGIEPVCV 59
Query: 104 N--NKES--KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
+ + E+ +A+ LVN A++ F EVT + F R ++N + + +
Sbjct: 60 DLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEA-FDRSFEVNLRAVIQVSQIV 118
Query: 154 LPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---I 208
L G +V +S + + S+Y S K AL + + EL I +
Sbjct: 119 ARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG-PHKIRVNAV 177
Query: 209 ATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ M + D + + R G VE I+
Sbjct: 178 NP-TVVMTSMGQA--TWSDPHKAKTMLNR--IPLGKFAEVEHVVNAIL 220
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 5e-13
Identities = 53/237 (22%), Positives = 81/237 (34%), Gaps = 37/237 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI-NEVTLVS 102
++ K +ITGA+ IG IA +A A LVL R + L + +V V+
Sbjct: 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 103 LNNKESKAVDH--------------LVNTASLGHTFFFEEVTDTSIFPRLLDIN----FW 144
++ E A LVN A + H + F + +N
Sbjct: 77 IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQL-FDATIAVNLRAPAL 135
Query: 145 G--NVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
V VA G ++ AS PLP Y ++KA LV + L EL
Sbjct: 136 LASAVGKAMVA----AGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGP 191
Query: 203 EVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
GI + + EM + + D A+ R G + + +V
Sbjct: 192 H-GIRANSVCP-TVVLTEMGQR--VWGDEAKSAPMIAR--IPLGRFAVPHEVSDAVV 242
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 5e-13
Identities = 48/212 (22%), Positives = 87/212 (41%), Gaps = 21/212 (9%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY------------ 92
++ K ++TG++S IG IA A+ AN+VL + + I +
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+ L +L +E VD LVN A + H E+ + +++ +N + T +
Sbjct: 62 DVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPL-ESWDKIIALNLSAVFHGTRL 120
Query: 153 ALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---I 208
ALP + N GR++ ASV + + Y +AK +V + + E +T I
Sbjct: 121 ALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATS-NVTCNAI 179
Query: 209 ATHGWIGIEMTKGKFMLEDGAEMQWKEEREVH 240
GW+ + + ++D A + H
Sbjct: 180 CP-GWVLTPLVQK--QIDDRAANGGDPLQAQH 208
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 9e-13
Identities = 44/228 (19%), Positives = 84/228 (36%), Gaps = 23/228 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT---- 99
+ K V +TGA IG A + + A + + + Q E + +V
Sbjct: 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATE---VMDVADAAQ 60
Query: 100 ---LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156
+ E++ +D LVN A + ++++ + + +N G +
Sbjct: 61 VAQVCQRLLAETERLDALVNAAGILRMGATDQLSKED-WQQTFAVNVGGAFNLFQQTMNQ 119
Query: 157 LHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---IATHG 212
G +V AS P MS Y ++KAAL + S+ EL G+ ++ G
Sbjct: 120 FRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGS-GVRCNVVSP-G 177
Query: 213 WIGIEMTKGKFMLEDGAEMQWKEEREVHVAG------GPVEDFARLIV 254
+M + ++ +D E + + E G ++ A I+
Sbjct: 178 STDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTIL 225
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 1e-12
Identities = 44/200 (22%), Positives = 72/200 (36%), Gaps = 24/200 (12%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTL 100
S+ KV ++TGA +IG A A+ + L+ L+ E
Sbjct: 2 SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALE-KAEASVREKGVEARS 60
Query: 101 VSLN--NKES------KAVDH------LVNTASLGHTFFFEEVTDTSI--FPRLLDINFW 144
+ ++E+ V L N A G+ F V D F R+L IN
Sbjct: 61 YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNA--GYQGAFAPVQDYPSDDFARVLTINVT 118
Query: 145 GNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
G + + N +VN AS+ P M+ Y ++K A++ E+ +L
Sbjct: 119 GAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPY 178
Query: 204 VGITI-ATH-GWIGIEMTKG 221
I + A G++G
Sbjct: 179 -NIRVNAISPGYMGPGFMWE 197
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 1e-12
Identities = 49/232 (21%), Positives = 78/232 (33%), Gaps = 28/232 (12%)
Query: 39 NFYSENM---EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--- 92
N Y ++M + KVV+ITGAS IG + Y R +V +R I
Sbjct: 17 NLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGD 76
Query: 93 --NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
P +V + +D LVN A + F E+T + L +N G + T
Sbjct: 77 ISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQ-EDYDHNLGVNVAGFFHIT 135
Query: 151 FVALPYLHESNGRVVVN-ASVENWLPLPRMSLYA--SAKAALVTFYESLRFELNDEVGIT 207
A + + +V+ + P+ M K L SL E + G+
Sbjct: 136 QRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRS-GVR 194
Query: 208 ---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
++ G I M +H G G + D ++
Sbjct: 195 VNAVSP-GVIKTPMH---------PAETHSTLAGLHPVGRMGEIRDVVDAVL 236
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 4e-12
Identities = 42/235 (17%), Positives = 80/235 (34%), Gaps = 35/235 (14%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
+ KV I+TGA + IG +A A +++ + + + ++
Sbjct: 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAAD-AAATKIGC--GAAACRVD 83
Query: 105 --NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDIN----FWGN 146
+++ V LV A + H + T F R++ IN +
Sbjct: 84 VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVED-FDRVIAINLRGAWLCT 142
Query: 147 VYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
+ A P + E G +VN +S+ + + Y +KA ++ EL G
Sbjct: 143 KH----AAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSS-G 197
Query: 206 ITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHV----AGGPVEDFARLIV 254
I ++ M + + DGA + P E+ A ++V
Sbjct: 198 IRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAP-EEMAGIVV 251
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 4e-12
Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 29/237 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVL-----------VARRENRLQGSTI--- 89
++ KV ++TG+ IG +A + A +V+ V L I
Sbjct: 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 90 -DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
D V L +D V+ + + ++VT+ F R+ +N G +
Sbjct: 75 ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE-FDRVFSLNTRGQFF 133
Query: 149 PTFVALPYLHESNGRVVVNAS-VENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
A +L E GR+V+ +S +P+ SLY+ +K A+ +F + D+ IT
Sbjct: 134 VAREAYRHLTEG-GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDK-KIT 191
Query: 208 I-ATH-GWIGIEMT-KGKFMLEDGAEMQWKEEREVHVAG-------GPVEDFARLIV 254
+ A G +M + E+R+ A G +D A ++
Sbjct: 192 VNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVG 248
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 4e-12
Identities = 35/226 (15%), Positives = 67/226 (29%), Gaps = 25/226 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE 107
+ ++T A G + +V E ++L ++
Sbjct: 2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE---SENPGTIALAEQK 58
Query: 108 SKA-----------VDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYPTFVAL 154
+ +D +V+ + + TS ++ + + A+
Sbjct: 59 PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAI 118
Query: 155 PYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---IAT 210
L + G V+ S PL LY A+AA V ES L+ + GI I
Sbjct: 119 APLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRD-GILLYAIGP 177
Query: 211 HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ E+ E++ + G G ++ LI
Sbjct: 178 -NFFNNPTYFPTSDWENNPELR-ERVDRDVPLGRLGRPDEMGALIT 221
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 5e-12
Identities = 31/231 (13%), Positives = 62/231 (26%), Gaps = 31/231 (13%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-------------GSTIDEYNP 94
V+ ITG++S IG + A+ ++ + R + ++ + +D
Sbjct: 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61
Query: 95 INEVTLVSLNN------KESKAVDHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWGNV 147
+ + LV + + VN + E P + +
Sbjct: 62 VLDG-LV--CCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT 118
Query: 148 YPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
P LP + A YA +K A+ + G+
Sbjct: 119 QPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGR-GVR 177
Query: 208 I-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ G + + + + R V G + A I
Sbjct: 178 LNVVAPGAVETPLLQA---SKADPRYGESTRRFVAPLGRGSEPREVAEAIA 225
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 64.0 bits (157), Expect = 6e-12
Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 23/205 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTL-----VS 102
+V I+TGASS G IA + R + + L+ + ++ + L V+
Sbjct: 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 103 LNNKESKA-----------VDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVYP 149
+ + A +D LVN A + + T + F +++ +N G
Sbjct: 63 -DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121
Query: 150 TFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
LP++ V+VN ASV + + P S Y ++K A++ +S+ + GI
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGS-GIRC 180
Query: 209 -ATH-GWIGIEMTKGKFMLEDGAEM 231
A G I MT+ + + +
Sbjct: 181 NAVCPGMIETPMTQWRLDQPELRDQ 205
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 6e-12
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 32/214 (14%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------ 97
++ D V I+TGA++ IG IA +AK A++V+ + + + I +
Sbjct: 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAE-AVAAA---IRQAGGKAI 64
Query: 98 -----VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG 145
VT ++ + + LVN A G F+ F +N +
Sbjct: 65 GLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSD--FEWAFKLNLFS 122
Query: 146 NVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEV 204
+ +A P++ ++ G ++ +S+ RM+ Y S+KAA+ ++ F++
Sbjct: 123 LFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPM- 181
Query: 205 GIT---IATHGWIGIEMTKGKFMLEDGAEMQWKE 235
GI IA G I + +L E +
Sbjct: 182 GIRVNAIAP-GAIKTDALAT--VLTPEIERAMLK 212
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 6e-12
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE---- 97
+++E KVV+ITG+S+ +G+ +A +A KA +V+ R + S ++E I +
Sbjct: 2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEE---IKKVGGE 58
Query: 98 -------VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINF 143
VT LV KE +D ++N A L + E++ + + +++D N
Sbjct: 59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD-WNKVIDTNL 117
Query: 144 WGNVYPTFVALPYL--HESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201
G + A+ Y ++ G V+ +SV +P P YA++K + E+L E
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177
Query: 202 DEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ GI I G I + KF + Q + + G G E+ A +
Sbjct: 178 PK-GIRVNNIGP-GAINTPINAEKFADPE----QRADVESMIPMGYIGEPEEIAAVAA 229
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 6e-12
Identities = 45/217 (20%), Positives = 84/217 (38%), Gaps = 23/217 (10%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVL-----------VARRENRLQGSTI- 89
S+ + KV + TGA IG IA E +R A++V+ V +L +
Sbjct: 16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA 75
Query: 90 ---DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
D P V L +D +++ + + EVT F ++ ++N G
Sbjct: 76 IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQEL-FDKVFNLNTRGQ 134
Query: 147 VYPTFVALPYLHESNGRVVVNAS-VENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
+ L + GR+++ +S +P +LYA +KAA+ F + + + G
Sbjct: 135 FFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK-G 192
Query: 206 IT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREV 239
+T IA G + +M + + ++
Sbjct: 193 VTVNCIAP-GGVKTDMFDENSWHYAPGGYKGMPQEKI 228
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 8e-12
Identities = 38/197 (19%), Positives = 72/197 (36%), Gaps = 24/197 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
+++ K V++TG + IG I E+A A + AR E L + ++ +VT
Sbjct: 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN-ECLSKWQKKGFQVTGSV 69
Query: 103 LNNKESKAVDH---------------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ + L+N + + T F + N
Sbjct: 70 CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAED-FSFHISTNLESAY 128
Query: 148 YPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+ + +A P L S G ++ +S+ + S+Y++ K AL +L E + GI
Sbjct: 129 HLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD-GI 187
Query: 207 T---IATHGWIGIEMTK 220
+A I + +
Sbjct: 188 RANAVAP-AVIATPLAE 203
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 9e-12
Identities = 45/231 (19%), Positives = 78/231 (33%), Gaps = 27/231 (11%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVL-------------VARRENRLQGSTI- 89
++++KV++I G ++G A +A NLVL +
Sbjct: 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67
Query: 90 ---DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
D N L KE VD +NT E ++ F + IN
Sbjct: 68 YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAE-FDAMDTINNKVA 126
Query: 147 VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+ A +++ NG ++ A+ S YA KA + + + EL + I
Sbjct: 127 YFFIKQAAKHMNP-NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQ-QI 184
Query: 207 T---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ IA G + G E + + + + +ED A +I
Sbjct: 185 SVNAIAP-GPMDTSFFYG---QETKESTAFHKSQAMGNQLTKIEDIAPIIK 231
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 63.3 bits (155), Expect = 9e-12
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 25/231 (10%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLV 101
++ ++DK+ +ITG ++ IG IA +A A++ + + I V V
Sbjct: 2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG--RRVLTV 59
Query: 102 SLN--NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ + + LVN A + F+E+T + + +IN
Sbjct: 60 KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQ-WKKTFEINVDSGF 118
Query: 148 YPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+P + + GR++ S WL + + Y S KAA + F +L +L + GI
Sbjct: 119 LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKD-GI 177
Query: 207 T---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
T IA + T+ L ++ + + P D
Sbjct: 178 TVNAIAP-SLVRTATTE-ASALSAMFDVLPNMLQAIPRLQVP-LDLTGAAA 225
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 1e-11
Identities = 44/217 (20%), Positives = 73/217 (33%), Gaps = 29/217 (13%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
++ ++ ++TG S IG+ IA + A + + AR T + + +
Sbjct: 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACA-DTATRLSAYGDCQAIPA 84
Query: 104 N--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
+ + S +D LVN A E S + +++ +N
Sbjct: 85 DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPV-SGWEKVMQLNVTSVFSC 143
Query: 150 TFVALPYLHES-----NGRVVVNASVENWLPLP-RMSLYASAKAALVTFYESLRFELNDE 203
LP L S RV+ SV + + Y +KAAL L EL E
Sbjct: 144 IQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203
Query: 204 VGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEER 237
I IA G MT+ + D ++
Sbjct: 204 -HINVNVIAP-GRFPSRMTRH--IANDPQALEADSAS 236
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 1e-11
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 21/183 (11%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-------ARRENRL---QGSTI-- 89
SE ++ K V+ITG S IG ++ +AK AN+ + A + +G
Sbjct: 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL 101
Query: 90 ---DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDINFW 144
D + + +V ++ +++ LVN + + + + + IN +
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNV--AQQYPQQGLEYITAEQLEKTFRINIF 159
Query: 145 GNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEV 204
+ T AL +L + ++ AS+ + + Y++ K A+V F SL L +
Sbjct: 160 SYFHVTKAALSHLKQG-DVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQK- 217
Query: 205 GIT 207
GI
Sbjct: 218 GIR 220
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 1e-11
Identities = 47/240 (19%), Positives = 94/240 (39%), Gaps = 30/240 (12%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVL-----------VARRENRLQGSTI- 89
S ++E KV ++TGA IG ++A E +R +++ V +
Sbjct: 24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC 83
Query: 90 ---DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
+ + V + K +D + + + + ++VT F R+ IN G
Sbjct: 84 VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQ 142
Query: 147 VYPTFVALPYLHESNGRVVVNAS-VENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
+ A +L GR+++ S +P+ ++Y+ +K A+ TF + ++ D+
Sbjct: 143 FFVAREAYKHLEIG-GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADK-K 200
Query: 206 ITI-ATH-GWIGIEMTK--GKFMLEDGAEMQWKEEREVHVAG-------GPVEDFARLIV 254
IT+ G I +M + + +G + +E E G D AR++
Sbjct: 201 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVC 260
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 2e-11
Identities = 50/233 (21%), Positives = 80/233 (34%), Gaps = 35/233 (15%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
+E+KV IITGA IG + + A+ A +VL E L ++
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLA-GAAASVGR--GAVHHVVD 65
Query: 105 --NKES------KAVDH------LVNTASLGHTFFFEEVTDTSI--FPRLLDINFWGNVY 148
N+ S +D + N A+ VT ++ + +N G +
Sbjct: 66 LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSD-PADMLVTQMTVDVWDDTFTVNARGTML 124
Query: 149 PTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
A+P L + G +VN +S + YA KAA+ T + + G+
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRH-GVR 183
Query: 208 I-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVA----GGPVEDFARLIV 254
A G + T LE G + H G P + A L+
Sbjct: 184 CNAIAPGLV---RTP---RLEVGLPQPIVDIFATHHLAGRIGEP-HEIAELVC 229
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 62.1 bits (152), Expect = 2e-11
Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 36/235 (15%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------- 97
++ KV ++TG +S +G ++ A + E Q E + E
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQ-QLAAE---LGERSMFVRH 59
Query: 98 -VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDIN----FWG 145
V+ +++ + ++ LVN A + E F RLL IN F G
Sbjct: 60 DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMET-GRLEDFSRLLKINTESVFIG 118
Query: 146 NVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
+ + E+ G ++ ASV +WLP+ + + Y+++KAA+ + + G
Sbjct: 119 CQQ----GIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQ-G 173
Query: 206 ITI---ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
I + H I M + + + ++ + +++ AG E A+L++
Sbjct: 174 YAIRVNSIHPDGIYTPMMQA-SLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVL 227
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 3e-11
Identities = 56/225 (24%), Positives = 87/225 (38%), Gaps = 30/225 (13%)
Query: 32 GCEWLYNNFYSENM------EDKVVIITGASSDIGEQIAYEYAKRKANLVL--------- 76
G + N Y ++M K +TG S IG IA A A + L
Sbjct: 10 GVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERA 69
Query: 77 --VARRENRLQGSTI----DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVT 130
V + G + D + + + +D LVN+A + H+ EE T
Sbjct: 70 QAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETT 129
Query: 131 DTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS-VENWLPLPRMSLYASAKAAL 189
F ++ +NF A +L + GR++ S + +P P +SLY+++KAAL
Sbjct: 130 VAD-FDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSNLAELVPWPGISLYSASKAAL 187
Query: 190 VTFYESLRFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQ 232
+ L +L GIT+ H G +M D AE Q
Sbjct: 188 AGLTKGLARDLGPR-GITVNIVHPGSTDTDMNPA---DGDHAEAQ 228
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 4e-11
Identities = 37/202 (18%), Positives = 59/202 (29%), Gaps = 37/202 (18%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVL-----------VARRENRLQGSTI- 89
+ME ++TGA+ IG IA + + +V+ +A N+ + +T
Sbjct: 18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAV 77
Query: 90 -------DEYNPINEV-TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDI 141
+ +++ + D LVN AS + +
Sbjct: 78 VCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVE 137
Query: 142 NFWGNVYPT----------------FVALPYLHESNGRVVVNASVENWLPLPRMSLYASA 185
+ T P SN +V P SLY
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMG 197
Query: 186 KAALVTFYESLRFELNDEVGIT 207
K ALV +S EL GI
Sbjct: 198 KHALVGLTQSAALELAPY-GIR 218
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 4e-11
Identities = 39/201 (19%), Positives = 75/201 (37%), Gaps = 38/201 (18%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN----EVTLVSL 103
KV ++TGA IG+ IA K + + + + + E IN V +
Sbjct: 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAK-AVASE---INQAGGHAVAVKV 58
Query: 104 N--NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDIN----FWG 145
+ +++ +A +VN A + + E +T I ++ +IN WG
Sbjct: 59 DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITP-EIVDKVYNINVKGVIWG 117
Query: 146 N--VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
F + G+++ S + P +++Y+S+K A+ ++ +L
Sbjct: 118 IQAAVEAFKKEGH----GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPL 173
Query: 204 VGIT---IATHGWIGIEMTKG 221
GIT G + M
Sbjct: 174 -GITVNGYCP-GIVKTPMWAE 192
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 5e-11
Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 24/231 (10%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
++DKV IITG + IGE A + + A +V+ ++ Q + + ++ V +
Sbjct: 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQ-KVCNNIGSPDVISFVHCD 72
Query: 105 -NKES---KAVDH----------LVNTASLGHTFFFE-EVTDTSIFPRLLDINFWGNVYP 149
K+ VD + + T + F R++DIN +G
Sbjct: 73 VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 132
Query: 150 TFVALPYLHESNGRVVVN-ASVENWLPLPRMSL-YASAKAALVTFYESLRFELNDEVGIT 207
A + + +V AS+ ++ +S Y + K A++ SL EL + GI
Sbjct: 133 AKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY-GIR 191
Query: 208 I-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ + + D + ++ + ++ G ED A +
Sbjct: 192 VNCVSPYIVASPLLT-DVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVA 241
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 6e-11
Identities = 36/197 (18%), Positives = 52/197 (26%), Gaps = 40/197 (20%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVL-----------VARRENRLQG---- 86
E E +ITG + IG IA ++ +V+ + N +
Sbjct: 6 HEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAV 65
Query: 87 ------STIDEYNPINEVTLVSLNNKESKAVDHLVNTAS-----------LGHTFFFEEV 129
S E ++ + + D LVN AS + +
Sbjct: 66 LCKGDLSLSSSLLDCCE-DIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKP 124
Query: 130 TDTSIFPRLLDINFWG------NVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183
D L N N VV LPLP +Y
Sbjct: 125 IDAQ-VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 183
Query: 184 SAKAALVTFYESLRFEL 200
AK AL + EL
Sbjct: 184 MAKHALGGLTRAAALEL 200
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 6e-11
Identities = 37/209 (17%), Positives = 66/209 (31%), Gaps = 35/209 (16%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTL 100
+++ K V+ITG+S IG A +A+ A + L R+ TI +
Sbjct: 2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAF 61
Query: 101 VSLNNKESKAVDHLVNTA---------------SLGHTFFFEEVTDTSIFPRLLDINFWG 145
+ + S+A LV+ L E+ DT + ++D N
Sbjct: 62 FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTF-YDAVMDANIRS 120
Query: 146 ------NVYPTFVALPYLHESNGRVV----VNASVENWLPLPRMSLYASAKAALVTFYES 195
P A V+ + P LY +AKA L +++
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG---PGAGLYGAAKAFLHNVHKN 177
Query: 196 LRFELNDEVGIT---IATHGWIGIEMTKG 221
+ G+ ++ G +
Sbjct: 178 WVDFHTKD-GVRFNIVSP-GTVDTAFHAD 204
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 1e-10
Identities = 50/196 (25%), Positives = 74/196 (37%), Gaps = 22/196 (11%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVL-----------VARRENRLQGSTI- 89
S +KV I+TGAS IG IA A +V+ VA + G +
Sbjct: 22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT 81
Query: 90 ---DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
D +P L + + VD LVN A + E D F R++ +N G
Sbjct: 82 AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAV-FDRVIAVNLKGT 140
Query: 147 VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
A L GR++ ++ + L P +YA+AKA + L EL I
Sbjct: 141 FNTLREAAQRLRVG-GRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGR-DI 198
Query: 207 T---IATHGWIGIEMT 219
T +A G ++
Sbjct: 199 TVNAVAP-GPTATDLF 213
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 1e-10
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 45 MEDKVVIITGAS-SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTLV 101
++ KVV++T A+ + IG A A++V+ E RL T D+ + V V
Sbjct: 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLG-ETRDQLADLGLGRVEAV 78
Query: 102 SLN--NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ + E+ + V+ LVN A LG ++TD + R+L++ +
Sbjct: 79 VCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTD-EEWDRVLNVTLTSVM 137
Query: 148 YPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
T AL Y + G +V NASV W S YA+AKA ++ E + G
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEF-G 196
Query: 206 IT---IATHGWIGIEMTKG 221
+ ++ + +
Sbjct: 197 VRINAVSP-SIARHKFLEK 214
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 59.8 bits (146), Expect = 2e-10
Identities = 47/231 (20%), Positives = 81/231 (35%), Gaps = 33/231 (14%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
+ K VIITG + +G + A + A +VL + +T E L+
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA-ATARELGD--AARYQHLD 59
Query: 105 --NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
+E A + LVN A + F E F ++++IN G
Sbjct: 60 VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLET-ESVERFRKVVEINLTG----V 114
Query: 151 FV----ALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
F+ +P + ++ G +VN +S + L S Y ++K + + EL +
Sbjct: 115 FIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTD-R 173
Query: 206 ITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
I + + H G MT E + G + A +V
Sbjct: 174 IRVNSVHPGMTYTPMTAE--TGIRQGE-GNYPNTPMGRVGNEPGEIAGAVV 221
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 3e-10
Identities = 40/242 (16%), Positives = 75/242 (30%), Gaps = 51/242 (21%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVSLNN 105
+++I+G ++ IG +V + R+ + ST + + + +
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEG----RKQAIADVLA 57
Query: 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV 165
K SK +D LV A LG T + ++ +N++G LP L + +
Sbjct: 58 KCSKGMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAA 109
Query: 166 VN-----------------------------ASVENWLPLPRMSLYASAKAALVTFYESL 196
V A VE+ YA +K AL
Sbjct: 110 VVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKR 169
Query: 197 RFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARL 252
+ G+ + G + + L+D + + V G + A +
Sbjct: 170 AAAWGEA-GVRLNTIAPGATETPLLQA--GLQDPRYGESIAKF-VPPMGRRAEPSEMASV 225
Query: 253 IV 254
I
Sbjct: 226 IA 227
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 4e-10
Identities = 40/206 (19%), Positives = 79/206 (38%), Gaps = 22/206 (10%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVL-----------VARRENRLQGSTI---- 89
++K ++TG+S +G+ A A+ N+V+ A +L +
Sbjct: 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61
Query: 90 DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
+ P + ++ +D VN A+ G E+ +T + ++IN ++
Sbjct: 62 NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETH-WDWTMNINAKALLFC 120
Query: 150 TFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT- 207
A + ++ G +V +S+ + L + +KAAL L EL+ + I
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPK-QIIV 179
Query: 208 --IATHGWIGIEMTKGKFMLEDGAEM 231
++ G I + K ED E
Sbjct: 180 NAVSG-GAIDTDALKHFPNREDLLED 204
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 58.6 bits (143), Expect = 4e-10
Identities = 39/218 (17%), Positives = 80/218 (36%), Gaps = 34/218 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
++ K ++TG++ +G A A A ++L R L ++D + V+
Sbjct: 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLA-ESVDTLTRKGYDAHGVA 64
Query: 103 LN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG--- 145
+ + E VD L+N A + + E+ + + +++D N
Sbjct: 65 FDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELEN-WQKVIDTNLTSAFL 123
Query: 146 ---NVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
+ +A S G+++ S+ + P ++ Y +AK + S+ E
Sbjct: 124 VSRSAAKRMIA----RNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQ 179
Query: 203 EVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEER 237
I I G+I +M ++ED W +
Sbjct: 180 F-NIQTNAIGP-GYILTDMNTA--LIEDKQFDSWVKSS 213
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 4e-10
Identities = 44/218 (20%), Positives = 82/218 (37%), Gaps = 35/218 (16%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPI-NEVTLVSLN- 104
KV ++TG + IG I+ + A ++ + + Q TI + V L+
Sbjct: 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62
Query: 105 -NKES------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLDIN----FWGN- 146
+K + +A + LVN A + EVT+ ++ +N F+G
Sbjct: 63 TDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTE-EDLKQIYSVNVFSVFFGIQ 121
Query: 147 -VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
F L G+++ AS+ P +S Y++ K A+ ++ EL + G
Sbjct: 122 AASRKFDELGV----KGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPK-G 176
Query: 206 IT---IATHGWIGIEMTKG---KFMLEDGAEMQWKEER 237
T A G +G M + + +G + +
Sbjct: 177 HTVNAYAP-GIVGTGMWEQIDAELSKINGKPIGENFKE 213
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 5e-10
Identities = 44/238 (18%), Positives = 88/238 (36%), Gaps = 38/238 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------ 97
++++V I+TG + +IG A+ A +++ E +++ +
Sbjct: 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMAT-KAVED---LRMEGHDVS 65
Query: 98 -----VT-------LVSLNNKESKAVDHLVNTASLGHTFF-FEEVTDTSIFPRLLDINFW 144
VT V +++ VD LV A + + E++TD + + +DIN
Sbjct: 66 SVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTD-GQWLKQVDINLN 124
Query: 145 GNVYPTFVALPYLHESNGRVVVN-ASVENWL--PLPRMSLYASAKAALVTFYESLRFELN 201
G + E V+V S+ + + + Y ++KA + + SL E
Sbjct: 125 GMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWA 184
Query: 202 DEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
GI +A +I +T +F +E G G ++ A ++
Sbjct: 185 PH-GIRANAVAP-TYIETTLT--RFGMEKPELYDAWIAG--TPMGRVGQPDEVASVVQ 236
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 6e-10
Identities = 45/240 (18%), Positives = 84/240 (35%), Gaps = 44/240 (18%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR------------------L 84
+ ++ +++ GA DIG A +A+ AN+VL +
Sbjct: 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63
Query: 85 QGSTIDEYNPINEV-TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDI 141
+ + EV +S + + LV+ A G + + + + ++LD+
Sbjct: 64 KADLTNA----AEVEAAISAAADKFGEIHGLVHVA--GGLIARKTIAEMDEAFWHQVLDV 117
Query: 142 NFWGNVYPTFVALPYLHESNGRVVVNASVENWL-PLPRMSLYASAKAALVTFYESLRFEL 200
N ALP + + G +V +S P YA++K A++TF L E+
Sbjct: 118 NLTSLFLTAKTALPKMAKG-GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEV 176
Query: 201 NDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVA---GGPVEDFARLIV 254
I + G I + + + +E + G ED A L+
Sbjct: 177 GP--KIRVNAVCP-GMISTTFH------DTFTKPEVRERVAGATSLKREGSSEDVAGLVA 227
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 9e-10
Identities = 39/197 (19%), Positives = 70/197 (35%), Gaps = 22/197 (11%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLV 101
S + KV +++G + +G A +V + + + E V
Sbjct: 2 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGK-AMAAELAD--AARYV 58
Query: 102 SLN--NKES--KAVDH----------LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
L+ AVD LVN A + + E+ + + R+LD+N G
Sbjct: 59 HLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIED-YALTEWQRILDVNLTGVF 117
Query: 148 YPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+ + E+ ++N +S+E Y + K A+ +S EL GI
Sbjct: 118 LGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPS-GI 176
Query: 207 TI-ATH-GWIGIEMTKG 221
+ + H G + MT
Sbjct: 177 RVNSIHPGLVKTPMTDW 193
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 9e-10
Identities = 42/212 (19%), Positives = 78/212 (36%), Gaps = 24/212 (11%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVS- 102
++ +TGA S IG +I +A A L+L+ R L E +V+
Sbjct: 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALD-RAAQELGAAVAARIVAD 66
Query: 103 LNNKESKA-----------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
+ + E+ V LVN+A + E D + + +++ +N G + +
Sbjct: 67 VTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDAT-WRQVMAVNVDGMFWASR 125
Query: 152 VALPYLHESNGRVVVN-ASVENWL--PLPRMSLYASAKAALVTFYESLRFELNDEVGIT- 207
+ +VN S+ + S Y ++K A+ +L E G+
Sbjct: 126 AFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGR-GVRV 184
Query: 208 --IATHGWIGIEMTKGKFMLEDGAEMQWKEER 237
+A G++ EMT M E + +
Sbjct: 185 NALAP-GYVATEMTLK--MRERPELFETWLDM 213
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 1e-09
Identities = 40/229 (17%), Positives = 74/229 (32%), Gaps = 37/229 (16%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------V 98
+E KV +TGA+ G A A+ A+++ V + G
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 99 TLVSLNNKESKAV------------------------DHLVNTASLGHTFFFEEVTDTSI 134
LV +N+ D +V A +G+ + T
Sbjct: 69 DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED 128
Query: 135 FPRLLDINFWGNVYPTF-VALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVT 191
+ ++DIN G V+ T +P++ G +++ +SV P Y +AK +V
Sbjct: 129 WTEMIDINLAG-VWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187
Query: 192 FYESLRFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEERE 238
+ EL I + + H + M + + +
Sbjct: 188 LMRAFGVELGQH-MIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPD 235
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 1e-09
Identities = 52/254 (20%), Positives = 92/254 (36%), Gaps = 55/254 (21%)
Query: 38 NNFYSENM-EDKVVIITGASSDIGEQIAYEYAKRKANLV------------LVARRENR- 83
N Y ++M + VV++TG S IG + A++ + +VA
Sbjct: 16 ENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG 75
Query: 84 -----LQGSTIDEYNPINEVT-LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--F 135
+ G + ++ + S +++ +D LVN A G + + V + S+
Sbjct: 76 GEAVAIPGDVGNA----ADIAAMFSAVDRQFGRLDGLVNNA--GIVDYPQRVDEMSVERI 129
Query: 136 PRLLDINFWGNVYPTFVA--------LPYLHESNGRVVVNASVENWLPLP-RMSLYASAK 186
R+L +N G + + G +V +S+ L + YA++K
Sbjct: 130 ERMLRVNVTG----SILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK 185
Query: 187 AALVTFYESLRFELNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVA- 242
AA+ TF L E+ E GI + G I ++ G E V
Sbjct: 186 AAIDTFTIGLAREVAAE-GIRVNAVRP-GIIETDLH------ASGGLPDRAREMAPSVPM 237
Query: 243 --GGPVEDFARLIV 254
G E+ A I+
Sbjct: 238 QRAGMPEEVADAIL 251
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 1e-09
Identities = 49/251 (19%), Positives = 86/251 (34%), Gaps = 47/251 (18%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------V 98
+E +V ITGA+ G A A A+++ V + + Y+P + V
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAG---KLPSCVPYDPASPDDLSETV 65
Query: 99 TLVSLNNKESKAV------------------------DHLVNTASLGHTFFFEEVTDTSI 134
LV N+ A D +V A + ++++T
Sbjct: 66 RLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPED- 124
Query: 135 FPRLLDINFWGNVYPTF-VALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVT 191
F ++DIN G + T P + E G +++ +S P M Y ++K A+
Sbjct: 125 FRDVMDINVTG-TWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTG 183
Query: 192 FYESLRFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGP---- 245
+ EL I + + H G + M G + G M+ + +
Sbjct: 184 LARAFAAELGKH-SIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWV 242
Query: 246 --VEDFARLIV 254
ED A +
Sbjct: 243 AEPEDIADTVC 253
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 57.1 bits (139), Expect = 1e-09
Identities = 41/218 (18%), Positives = 87/218 (39%), Gaps = 33/218 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN------- 96
++ +V ++TG S +G IA A+ ++V+ +R +
Sbjct: 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77
Query: 97 -EVT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+V+ L+ ++ +D +VN A + EE F +++++N +G
Sbjct: 78 CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPL-DEFRQVIEVNLFG--- 133
Query: 149 PTF-----VALPYLHESNGRVVVNASVENW-LPLPRMSLYASAKAALVTFYESLRFELND 202
T+ N ++ S+ + +P +S YA++K + + ++L E
Sbjct: 134 -TYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGR 192
Query: 203 EVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEER 237
GI IA GW +MT+ + D ++ + +R
Sbjct: 193 Y-GIRVNVIAP-GWYRTKMTEA--VFSDPEKLDYMLKR 226
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 2e-09
Identities = 43/215 (20%), Positives = 81/215 (37%), Gaps = 38/215 (17%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLV 101
++ K +ITGAS+ IG+++A YA+ A + + AR + LQ I + +
Sbjct: 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPI 86
Query: 102 SLNNKESKAV--------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG-- 145
+ + V D V A + ++ F R+ D N G
Sbjct: 87 RCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPL-EEFQRIQDTNVTGVF 145
Query: 146 ----NVYPTFVALPYLHESNGRVVVNASVENWL--PLPRMSLYASAKAALVTFYESLRFE 199
V G ++ AS+ + ++S Y ++KAA+V +++ E
Sbjct: 146 LTAQAAARAMVD----QGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVE 201
Query: 200 LNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEM 231
L I ++ G+I E+ + + + A
Sbjct: 202 LAPH-QIRVNSVSP-GYIRTELV--EPLADYHALW 232
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 2e-09
Identities = 48/227 (21%), Positives = 85/227 (37%), Gaps = 39/227 (17%)
Query: 39 NFYSENM------EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY 92
N Y ++M + ++TGA S IG IA+ YA+ A+++ R + + DE
Sbjct: 17 NLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKE--VADEI 74
Query: 93 NPI--------------NEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRL 138
V+ ++ VD LVN A + EEV+ + +
Sbjct: 75 ADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGR-WREV 133
Query: 139 LDINFWGNVYPTF-----VALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFY 193
L +N + L +GR+V AS+ ++ ++ YA++K A+V
Sbjct: 134 LTVNLDA----AWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLT 189
Query: 194 ESLRFELNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEER 237
+L E G+ +A G++ T + D R
Sbjct: 190 RALASEWAGR-GVGVNALAP-GYVVTANTAA--LRADDERAAEITAR 232
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 2e-09
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 25/195 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+ K +++TGA+S IG +A+ A+LV V R E L + E V
Sbjct: 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA-EAVAALE--AEAIAVVA 59
Query: 104 NNKESKAV--------------DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
+ + KAV + + A + H+ + + ++L +N G+
Sbjct: 60 DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPL-EAWEKVLRVNLTGSFLV 118
Query: 150 TFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT-- 207
A L E G +V+ SV L ++ YA+ K +V +L EL + G+
Sbjct: 119 ARKAGEVLEEG-GSLVLTGSV-AGLGAFGLAHYAAGKLGVVGLARTLALELARK-GVRVN 175
Query: 208 -IATHGWIGIEMTKG 221
+ G I MT G
Sbjct: 176 VLLP-GLIQTPMTAG 189
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 4e-09
Identities = 47/235 (20%), Positives = 76/235 (32%), Gaps = 40/235 (17%)
Query: 32 GCEWLYNNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE 91
G E LY V I+TG IG IA A ++ + + I E
Sbjct: 14 GTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAE 73
Query: 92 YNPINEV------------------TLVSLNNKESKAVDHLVNTASLGHTFF----FEEV 129
++ + V E +D LVN A G F ++
Sbjct: 74 ---LSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNA--GIASIVRDDFLDL 128
Query: 130 TDTSIFPRLLDINFWGNVYPTFVALPYLHESN----GRVVVNASVENWLPLPRMSLYASA 185
+ F ++ +N G V+ T L + S+ ++ SV + P Y +
Sbjct: 129 KPEN-FDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMS 187
Query: 186 KAALVTFYESLRFELNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEER 237
KA L F + L L + GI + G I +MT + + +
Sbjct: 188 KAGLAAFSQGLALRLAET-GIAVFEVRP-GIIRSDMTAA---VSGKYDGLIESGL 237
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 4e-09
Identities = 43/247 (17%), Positives = 83/247 (33%), Gaps = 38/247 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+++ +V ITGA+ G A A A+++ T +P + L
Sbjct: 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 104 NNKE-----------------SKAV----------DHLVNTASLGHTFFFEEVTDTSIFP 136
+ + V D +V A + E+TD +
Sbjct: 72 VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ-WD 130
Query: 137 RLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYE 194
++ +N G +P + E+ G +VV +S P Y+++K L
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190
Query: 195 SLRFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPV-----E 247
+L EL + GI + + H + M + + M+E A + P +
Sbjct: 191 TLAIELGEY-GIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTAD 249
Query: 248 DFARLIV 254
+ A ++
Sbjct: 250 EVADVVA 256
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 4e-09
Identities = 32/234 (13%), Positives = 61/234 (26%), Gaps = 40/234 (17%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----GSTIDEYNPINEV---T 99
I+T G A ++ + + T + P++E
Sbjct: 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAE 61
Query: 100 LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRL--------LDINFWGNVYPTF 151
L+ VD LV+ + + ++
Sbjct: 62 LIEAVTSAYGQVDVLVSND--IFA------PEFQPIDKYAVEDYRGAVEALQIRPFALVN 113
Query: 152 VALPY-LHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT--- 207
+G ++ S + P +S Y SA+A T +L EL + I
Sbjct: 114 AVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEY-NIPVFA 172
Query: 208 IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG-------GPVEDFARLIV 254
I ++ E + + E HV G ++ L+
Sbjct: 173 IGP-NYLHSEDSPY---FYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVA 222
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 5e-09
Identities = 39/222 (17%), Positives = 78/222 (35%), Gaps = 45/222 (20%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLV 101
+++ KV +TG+S IG +A YA+ A++ + + Y
Sbjct: 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG--VHSKAY 88
Query: 102 SLNNKESKAV--------------DHLVNTASLGHTF-FFEEVTDTSIFPRLLDINFWGN 146
N + K+V D V A + T +V + + +++ ++ G
Sbjct: 89 KCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGV 148
Query: 147 VYPTFVALPYLHES-NGRVVVNASVE----NWLPLPRMSLYASAKAALVTFYESLRFELN 201
Y + ++ G +++ +S+ N P + Y +AKAA +SL E
Sbjct: 149 YYCSHNIGKIFKKNGKGSLIITSSISGKIVNI-PQL-QAPYNTAKAACTHLAKSLAIEW- 205
Query: 202 DEVGITIATH--------GWIGIEMTKGKFMLEDGAEMQWKE 235
A G+I ++T + +W +
Sbjct: 206 -------APFARVNTISPGYIDTDITDF---ASKDMKAKWWQ 237
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 6e-09
Identities = 42/205 (20%), Positives = 73/205 (35%), Gaps = 33/205 (16%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE---- 97
S E+KV I+TG+ IG+ A A+ A +V+ + + + I
Sbjct: 4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAE-AVAKQ---IVADGGT 59
Query: 98 -------VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI--FPRLLDI 141
V+ + E +D+LVN A++ + + + + + +
Sbjct: 60 AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119
Query: 142 NFWGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
N G ++ T + + G +VN +S WL Y AK + + L EL
Sbjct: 120 NLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY---YGLAKVGINGLTQQLSREL 176
Query: 201 NDEVGIT---IATHGWIGIEMTKGK 222
I IA G I E +
Sbjct: 177 GGR-NIRINAIAP-GPIDTEANRTT 199
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 8e-09
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 26/178 (14%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEV------- 98
+DKVVIITGA +G+ + E+AK A V+V L G + + V
Sbjct: 7 KDKVVIITGAGGGLGKYYSLEFAKLGAK-VVVNDLGGALNGQGGNS-KAADVVVDEIVKN 64
Query: 99 ---------------TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINF 143
+V K V ++N A + +++T+ + ++D++
Sbjct: 65 GGVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKD-YKLVIDVHL 123
Query: 144 WGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
G T A PY + GR+V +S + YASAK+AL+ F E+L E
Sbjct: 124 NGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEG 181
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 34/174 (19%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Query: 38 NNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVL--------VARRENRLQGSTI 89
+ + +++DKVV+ITGA + +G++ A +AK A +V+ G
Sbjct: 313 SGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAW 372
Query: 90 DEYNPINEV--TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ + + + ++ + +D LVN A + F +++ + + ++ G
Sbjct: 373 PDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQE-WDSVQQVHLIGTF 431
Query: 148 YPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
+ +A PY E GR++ S + Y+S+KA ++ +++ E
Sbjct: 432 NLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEG 485
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 9e-09
Identities = 34/204 (16%), Positives = 65/204 (31%), Gaps = 30/204 (14%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
+ +K +I+TG + IG A AN+ ++ R T +
Sbjct: 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70
Query: 103 LN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ + + + L+ A + E+T F + D+N +G
Sbjct: 71 CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHED-FAFVYDVNVFGVFN 129
Query: 149 PTFVALPYLHESN--GRVVVNASV-------ENWLPLPRMSLYASAKAALVTFYESLRFE 199
+ G +VV +S+ + Y S+KAA + L E
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189
Query: 200 LNDEVGIT---IATHGWIGIEMTK 220
GI ++ G++ + T
Sbjct: 190 WASA-GIRVNALSP-GYVNTDQTA 211
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 1e-08
Identities = 35/208 (16%), Positives = 49/208 (23%), Gaps = 53/208 (25%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLV----------------LVARRENR---LQG 86
V ++TGA+ +G IA + L ARR N +Q
Sbjct: 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQA 104
Query: 87 STIDEYNPINEVTLVSLNNKESKAV--------------DHLVNTASLGHTFFFEEVTD- 131
+ S D LVN AS + +
Sbjct: 105 DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDED 164
Query: 132 ------------TSIFPRLLDINFWG------NVYPTFVALPYLHESNGRVVVN-ASVEN 172
+ L N P H ++N
Sbjct: 165 GHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT 224
Query: 173 WLPLPRMSLYASAKAALVTFYESLRFEL 200
PL ++Y AK AL S EL
Sbjct: 225 NQPLLGYTIYTMAKGALEGLTRSAALEL 252
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-08
Identities = 34/208 (16%), Positives = 47/208 (22%), Gaps = 53/208 (25%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLV------------LVARRENRLQGSTI---- 89
V ++TGA+ +G IA + L A R S I
Sbjct: 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQA 67
Query: 90 ---DEYNPINEVTLVSLNNKESKAV--------------DHLVNTASLGHTFFFEEVTD- 131
+ S D LVN AS + +
Sbjct: 68 DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDED 127
Query: 132 ------------TSIFPRLLDINFWG------NVYPTFVALPYLHESNGRVVVN-ASVEN 172
+ L N P H ++N
Sbjct: 128 GHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT 187
Query: 173 WLPLPRMSLYASAKAALVTFYESLRFEL 200
PL ++Y AK AL S EL
Sbjct: 188 NQPLLGYTIYTMAKGALEGLTRSAALEL 215
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 3e-08
Identities = 51/241 (21%), Positives = 86/241 (35%), Gaps = 32/241 (13%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTL 100
S + +TG SS IG +A A R + AR + + +D +V
Sbjct: 19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVS-AAVDGLRAAGHDVDG 77
Query: 101 VSLN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
S + + + LVN+A ++ D +++ +LD N G
Sbjct: 78 SSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDD-ALWADVLDTNLTGV 136
Query: 147 VYPTFVALPYLH---ESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
T L GR+V AS + + Y ++K +V F +S+ FEL
Sbjct: 137 FRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKT 196
Query: 204 VGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKEE-REVHVAGGPV------EDFARLI 253
GIT + G++ M + ++E E A P+ E+ A L+
Sbjct: 197 -GITVNAVCP-GYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLV 254
Query: 254 V 254
Sbjct: 255 G 255
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 3e-08
Identities = 42/207 (20%), Positives = 71/207 (34%), Gaps = 41/207 (19%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP-INEVTLVS 102
+++ + V++TG + IG IA +A+ AN+ + R + D +V V
Sbjct: 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66
Query: 103 LN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ +E +D + A + +T + +N G Y
Sbjct: 67 TDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQ-LNGIFAVNVNGTFY 125
Query: 149 PTFVALPYLHES-NGRVVVNASV----------ENWLPLPRMSLYASAKAALVTFYESLR 197
L L S +GRVV+ +S+ + Y + KAA + F +
Sbjct: 126 AVQACLDALIASGSGRVVLTSSITGPITGYPGWSH---------YGATKAAQLGFMRTAA 176
Query: 198 FELNDEVGIT---IATHGWIGIEMTKG 221
EL IT I G I E
Sbjct: 177 IELAPH-KITVNAIMP-GNIMTEGLLE 201
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 3e-08
Identities = 41/198 (20%), Positives = 78/198 (39%), Gaps = 25/198 (12%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLV 101
+E + K ++TGA+ IG+ IA A A +++ + + + +
Sbjct: 1 TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAK-AAAASIG--KKARAI 57
Query: 102 SLN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ + + +D LVN AS+ +++V + +++D+N G
Sbjct: 58 AADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH-WRKIIDVNLTGTF 116
Query: 148 YPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
T + + GRV+ AS + P M+ Y +AK ++ F +L EL
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKY-N 175
Query: 206 IT---IATHGWIGIEMTK 220
IT + G I + K
Sbjct: 176 ITANAVTP-GLIESDGVK 192
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 4e-08
Identities = 41/226 (18%), Positives = 77/226 (34%), Gaps = 30/226 (13%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT------L 100
++ ++TG S IG IA R + + +R ++ ++ L
Sbjct: 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA-QSLGAVPLPTDLEKDDPKGL 60
Query: 101 VSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF-----VALP 155
V + + LV+ A++ E++ + R+L ++ F A
Sbjct: 61 VKRALEALGGLHVLVHAAAVNVRKPALELSYEE-WRRVLYLHLDV----AFLLAQAAAPH 115
Query: 156 YLHESNGRVVVNASV--ENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT---IAT 210
GRV+ SV + Y +AK AL+ +L E GI +
Sbjct: 116 MAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARL-GIRVNLLCP 174
Query: 211 HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
G++ E T + ++ + R G E+ AR+
Sbjct: 175 -GYVETEFTLP--LRQNPELYEPITARI--PMGRWARPEEIARVAA 215
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 4e-08
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+ + ++TGA+ IGE IA + + A + L RE++L+ + +V + S
Sbjct: 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLK-EIAADLGK--DVFVFSA 80
Query: 104 NNKESKAVDHLVNTA 118
N + K++ L A
Sbjct: 81 NLSDRKSIKQLAEVA 95
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 5e-08
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
E+KV ++TGA IG +IA AK ++++ ++R + S +DE E + +
Sbjct: 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD-SVVDEIKSFGYESSGYA 99
Query: 103 LNNKESKAVDHLVNTA 118
+ + + + ++N
Sbjct: 100 GDVSKKEEISEVINKI 115
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 5e-08
Identities = 13/76 (17%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
++ KV ++TG++ IG IA + A + +++ R + + N + V
Sbjct: 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 103 LNNKESKAVDHLVNTA 118
+N ++++
Sbjct: 64 MNLLSEESINKAFEEI 79
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 6e-08
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
N+E KV ++TGAS IG+ IA A+R A ++ A E+ Q + D + ++L
Sbjct: 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQ-AISDYLG--DNGKGMAL 62
Query: 104 NNKESKAVDHLVNTA 118
N ++++ ++
Sbjct: 63 NVTNPESIEAVLKAI 77
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 51.7 bits (125), Expect = 7e-08
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 50/206 (24%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
++ K +ITGASS IG IA K + +++ E +L+ S + + + +L
Sbjct: 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLK-SLGNALKDNYTIEVCNL 69
Query: 104 NNKES--------KAVDHLVNTASLGHTFFFEEVTDTSIFPRL--------LDINFWGNV 147
NKE +D LV A G +T ++ R+ +DIN N
Sbjct: 70 ANKEECSNLISKTSNLDILVCNA--G-------ITSDTLAIRMKDQDFDKVIDINLKANF 120
Query: 148 YPT-FVALPYLHESNGRV-----VV----NASVENWLPLPRMSLYASAKAALVTFYESLR 197
+ + GR+ +V N N Y ++KA L+ +SL
Sbjct: 121 ILNREAIKKMIQKRYGRIINISSIVGIAGNPGQAN---------YCASKAGLIGMTKSLS 171
Query: 198 FELNDEVGIT---IATHGWIGIEMTK 220
+E+ GIT +A G+I +MT
Sbjct: 172 YEVATR-GITVNAVAP-GFIKSDMTD 195
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 9e-08
Identities = 35/181 (19%), Positives = 72/181 (39%), Gaps = 32/181 (17%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLV---- 101
+ +V ++TGA + +G + A +A+R A +V+ N L G+ + +V
Sbjct: 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVV-----NDLGGTHSGDGASQRAADIVVDEI 72
Query: 102 ------SLNNKES---------KAVDH------LVNTASLGHTFFFEEVTDTSIFPRLLD 140
++ + S A+ LVN A + + ++ + + D
Sbjct: 73 RKAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQD-WNLVND 131
Query: 141 INFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
++ G+ T A PY+ + N GR+++ +S Y +AK L+ ++ E
Sbjct: 132 VHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIE 191
Query: 200 L 200
Sbjct: 192 G 192
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 51.3 bits (124), Expect = 1e-07
Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
++ +KV ++TGAS IG ++A+ A + A +V A + + + + +
Sbjct: 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAE-KFENSMKEKGFKARGLV 60
Query: 103 LNNKESKAVDHLVNTA 118
LN + +++ +
Sbjct: 61 LNISDIESIQNFFAEI 76
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 26/178 (14%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEV------- 98
+ +VV++TGA +G A +A+R A V+V +G + ++V
Sbjct: 8 DGRVVLVTGAGGGLGRAYALAFAERGAL-VVVNDLGGDFKGVGKGS-SAADKVVEEIRRR 65
Query: 99 ---------------TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINF 143
LV +D +VN A + F ++D + + ++
Sbjct: 66 GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDED-WDIIQRVHL 124
Query: 144 WGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL 200
G+ T A ++ + N GR+++ AS + Y++AK L+ +L E
Sbjct: 125 RGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEG 182
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-07
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTL 100
+ ++ +V I+TGAS IG IA E A+R A ++ A E + + E
Sbjct: 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAE-GIGAAFKQAGLEGRG 81
Query: 101 VSLNNKESKAVDHLVNTA 118
LN ++ AVD LV +
Sbjct: 82 AVLNVNDATAVDALVEST 99
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 1e-07
Identities = 39/192 (20%), Positives = 67/192 (34%), Gaps = 22/192 (11%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI-----DEYNPINEVTLV 101
++ ++TG +S +G A R +V++ R + E +V
Sbjct: 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTRE----EDVRRA 57
Query: 102 SLNNKESKAVDHLVNTASLGH---TFFFEEVTDTSIFPRLLDINFWG--NVYPTFVAL-- 154
+E + +V+ A +G E F R+L++N G NV
Sbjct: 58 VARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMR 117
Query: 155 ---PYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT- 210
P G +V ASV + + YA++K +V EL GI + T
Sbjct: 118 ENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW-GIRVVTV 176
Query: 211 -HGWIGIEMTKG 221
G + +G
Sbjct: 177 APGLFDTPLLQG 188
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-07
Identities = 41/237 (17%), Positives = 75/237 (31%), Gaps = 52/237 (21%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLV------------ARRENRLQGSTIDEY 92
++DKVV++TG + G A + A+ A+++L L+ E
Sbjct: 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLE-EAGLE- 65
Query: 93 NPINE----VTLVSLNNKESKAV--------------DHLVNTASLGHTFFFEEVTDTSI 134
+ + ++ ++ AV D +V A G + +
Sbjct: 66 --VEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANA--GICPLGAHLPVQA- 120
Query: 135 FPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASV-----------ENWLPLPRMSLYA 183
F D++F G + ALPYL ++ SV P + Y+
Sbjct: 121 FADAFDVDFVGVINTVHAALPYLTSG-ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYS 179
Query: 184 SAKAALVTFYESLRFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEERE 238
AK + ++ L +L + I H + +M M R
Sbjct: 180 YAKQLVDSYTLQLAAQLAPQ-SIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRA 235
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 2e-07
Identities = 28/174 (16%), Positives = 51/174 (29%), Gaps = 47/174 (27%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVT 99
+ + + ++TG + IG +I + + +VL R + +++ + V
Sbjct: 7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGH-EAVEKLKNSNHENVV 65
Query: 100 LVSLN---------------NKESKAVDHLVNTASLGHTFFFEEVTDTSI---------- 134
L+ +D LVN A + + I
Sbjct: 66 FHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEL 125
Query: 135 -------------------FPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169
L IN+ G T V +P L S+ +VN S
Sbjct: 126 VKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVS 179
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-07
Identities = 34/229 (14%), Positives = 66/229 (28%), Gaps = 41/229 (17%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE-----VT 99
+E KV ITGA+ G A A+ A+++ + + Q + + V
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCK---QLDGVKLPMSTPDDLAETVR 82
Query: 100 LVSLNNKESKAV------------------------DHLVNTASLGHTFFFEEVTDTS-- 133
V + A D ++ A +
Sbjct: 83 QVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANA--ALASEGTRLNRMDPK 140
Query: 134 IFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVT 191
+ ++D+N G VA+P++ G +V +S+ + Y ++K L
Sbjct: 141 TWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHG 200
Query: 192 FYESLRFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEERE 238
++ EL I + + M + E
Sbjct: 201 LMRTMALELGPR-NIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVE 248
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 3e-07
Identities = 47/213 (22%), Positives = 75/213 (35%), Gaps = 55/213 (25%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP-INEVTLVS 102
++ + V++TG + IG IA +A+ AN+ + AR L T + V V
Sbjct: 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97
Query: 103 LN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSI-------FPRLLDI 141
L+ A+D + A G + + +LD+
Sbjct: 98 LDVSDPGSCADAARTVVDAFGALDVVCANA--GIF------PEARLDTMTPEQLSEVLDV 149
Query: 142 NFWGNVYPTFVALPYLHES-NGRVVVNASV----------ENWLPLPRMSLYASAKAALV 190
N G VY L L S GRV++ +S+ + Y ++KAA +
Sbjct: 150 NVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSH---------YGASKAAQL 200
Query: 191 TFYESLRFELNDEVGIT---IATHGWIGIEMTK 220
F + EL G+T I G I E
Sbjct: 201 GFMRTAAIELAPR-GVTVNAILP-GNILTEGLV 231
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 47/247 (19%), Positives = 78/247 (31%), Gaps = 67/247 (27%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQG--STIDEYNPINEVTLVSLN 104
V ++TG + IG I + + ++VL AR R Q + + ++
Sbjct: 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 64
Query: 105 NKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRL-LDINFWGNVYPTF 151
+ +S +D LVN A G F + T I + + NF+G
Sbjct: 65 DLQSIRALRDFLRKEYGGLDVLVNNA--GIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 122
Query: 152 VALPYLHESNGRVVVNASVENWLPLPRMSL------------------------------ 181
LP + GRVV +S+ + L S
Sbjct: 123 ELLPLIKPQ-GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 181
Query: 182 -----------YASAKAALVTFYESLRFELNDEV---GITI-ATH-GWIGIEMTKGKFML 225
Y K + +L+++ I + A GW+ +M K
Sbjct: 182 VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATK 241
Query: 226 --EDGAE 230
E+GAE
Sbjct: 242 SPEEGAE 248
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 4e-07
Identities = 38/221 (17%), Positives = 76/221 (34%), Gaps = 41/221 (18%)
Query: 44 NMEDKVVIITGASSD--IGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE---- 97
+++ KVV++TGAS +G + A A+ A + + + + E + +
Sbjct: 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKE---LEKTYGI 73
Query: 98 --------VT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDIN 142
V LV + +D + A + + + ++ ++
Sbjct: 74 KAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSV-EAWNHVVQVD 132
Query: 143 FWGNVYPT-FVALPYLHESNGRVVVNASVE----NWLPLPRMSLYASAKAALVTFYESLR 197
G + V + G +V+ AS+ N+ P + S Y AKA + SL
Sbjct: 133 LNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF-PQEQTS-YNVAKAGCIHMARSLA 190
Query: 198 FELNDEVGIT---IATHGWIGIEMTKGKFMLEDGAEMQWKE 235
E D I+ G+I ++ + + W
Sbjct: 191 NEWRD--FARVNSISP-GYIDTGLSDF---VPKETQQLWHS 225
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 5e-07
Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 7/84 (8%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-------NRLQGSTIDEYNP 94
+ + ++TGA S IG ++ A A + L G E P
Sbjct: 2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61
Query: 95 INEVTLVSLNNKESKAVDHLVNTA 118
+ E++A L+
Sbjct: 62 RGNHAAFQADVSEARAARCLLEQV 85
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 6e-07
Identities = 42/203 (20%), Positives = 68/203 (33%), Gaps = 28/203 (13%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE-----V 98
++ +V I+TGASS +G + A+ A ++ + + + E V
Sbjct: 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE-EPAAELGAAVRFRNADV 62
Query: 99 T-------LVSLNNKESKAVDHLVNTASLGH---TFFFEEVTDTSIFPRLLDINFWG--N 146
T ++ +E V LVN A F R + +N G N
Sbjct: 63 TNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFN 122
Query: 147 VYPTFVAL-----PYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201
+ + P G +V AS+ + + YA++K + EL
Sbjct: 123 MIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELA 182
Query: 202 DEVGI---TIATHGWIGIEMTKG 221
GI TIA G M G
Sbjct: 183 RF-GIRVVTIAP-GIFDTPMMAG 203
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 7e-07
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
+ +V ++TGA+S IG +IA K + + AR E L+ +T+ E E +
Sbjct: 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR-TTLKELREAGVEADGRT 77
Query: 103 LNNKESKAVDHLVNTA 118
+ + ++ LV
Sbjct: 78 CDVRSVPEIEALVAAV 93
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 7e-07
Identities = 9/78 (11%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTL 100
S + +IT + +G+Q+ + + ++ + + + + Y + +
Sbjct: 2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQF 61
Query: 101 VSLNNKESKAVDHLVNTA 118
V + + + + +V A
Sbjct: 62 VQADVTKKEDLHKIVEEA 79
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 8e-07
Identities = 40/255 (15%), Positives = 80/255 (31%), Gaps = 71/255 (27%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL- 103
M V++TGA+ IG + + K K ++A + + + + V ++ L
Sbjct: 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR-VHVLPLT 59
Query: 104 -NNKES--------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+S + L+N A + ++ + ++ LD+N V
Sbjct: 60 VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119
Query: 149 PTFVALPYLHES------------NGRVVV----------NASVENWLPLPRMSLYASAK 186
T LP L + V+ N S P+ Y +K
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVL---AYRMSK 176
Query: 187 AALVTFYESLRFELNDEVGITIAT-H-GWIGIEMTK------------------------ 220
AA+ F +L +L D+ + + GW+ +
Sbjct: 177 AAINMFGRTLAVDLKDD-NVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNS 235
Query: 221 --GKFMLEDGAEMQW 233
G+F + + ++
Sbjct: 236 HNGRFFMRNLKPYEF 250
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 9e-07
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
++DK V+ITGA+ IG +AK A LV E L+ + V +
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLR-EAAEAV----GAHPVVM 56
Query: 104 NNKESKAVDHLVNTA 118
+ + +V+ A
Sbjct: 57 DVADPASVERGFAEA 71
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 2e-06
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
++ K I+TG+S +G+ IA++ AN+VL + +T +E+ V +
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 103 LNNKESKAVDHLVNTA 118
+ K + V+++V TA
Sbjct: 62 GDVKNPEDVENMVKTA 77
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 2e-06
Identities = 47/207 (22%), Positives = 71/207 (34%), Gaps = 52/207 (25%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN---RLQGSTIDEYNPINEV 98
+ + V++TG + IG IA +A + + R D +
Sbjct: 16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVE 75
Query: 99 TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRL--------LDINFWGNVYPT 150
+ V+ L+ A G VT + R+ ++ N G T
Sbjct: 76 QAYKEIEETHGPVEVLIANA--G-------VTKDQLLMRMSEEDFTSVVETNLTG----T 122
Query: 151 F-----VALPYLHESNGRVVVNASV---------ENWLPLPRMSLYASAKAALVTFYESL 196
F L GRVV+ +SV N YA++KA LV F SL
Sbjct: 123 FRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQAN---------YAASKAGLVGFARSL 173
Query: 197 RFELNDEVGIT---IATHGWIGIEMTK 220
EL IT +A G++ +MTK
Sbjct: 174 ARELGSR-NITFNVVAP-GFVDTDMTK 198
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 2e-06
Identities = 46/230 (20%), Positives = 78/230 (33%), Gaps = 48/230 (20%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE-----VT 99
+ KV ITGA+ G A A A+++ V + Q +++ E V
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCD---QIASVPYPLATPEELAATVK 67
Query: 100 LVSLNNKESKAV------------------------DHLVNTASLGHTFFFEEVTDTSIF 135
LV A D +V A + ++ +
Sbjct: 68 LVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDG-----W 122
Query: 136 PRLLDINFWGNVYPTF-VALPYLHE--SNGRVVVNASVE----NWLPLPRMSLYASAKAA 188
++D+N G VY T VA+P L + + G +V+ +S P Y +AK
Sbjct: 123 HDVIDVNLTG-VYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHG 181
Query: 189 LVTFYESLRFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEE 236
+V L + I + + H + M +F E A+M +
Sbjct: 182 VVGLMRVYANLLAGQ-MIRVNSIHPSGVETPMINNEFTREWLAKMAAATD 230
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 37/200 (18%), Positives = 70/200 (35%), Gaps = 24/200 (12%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---GSTIDEYNPIN---- 96
+ D V ++TG +S +G A +V++ R + G + +
Sbjct: 6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRA-RFAAADVTDE 64
Query: 97 -EVTLVSLNNKESKAVDHLVNTASLGH---TFFFEEVTDTSIFPRLLDINFWG--NVYPT 150
V + + +VN A G+ + V + F +++DIN G NV
Sbjct: 65 AAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRL 124
Query: 151 FVAL-----PYLHESNGR-VVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
P + R V++N ASV + + Y+++K +V + +L
Sbjct: 125 AAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASH 184
Query: 204 VGITIAT--HGWIGIEMTKG 221
I + T G +
Sbjct: 185 -RIRVMTIAPGLFDTPLLAS 203
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 3e-06
Identities = 39/207 (18%), Positives = 71/207 (34%), Gaps = 52/207 (25%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN---RLQGSTIDEYNPINEV 98
+ V++TG + IG IA A + + R L G +D +
Sbjct: 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVD 69
Query: 99 TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRL--------LDINFWGNVYPT 150
+ + V+ LV+ A G ++ + R+ ++ N G
Sbjct: 70 RAFTAVEEHQGPVEVLVSNA--G-------LSADAFLMRMTEEKFEKVINANLTG----A 116
Query: 151 F-----VALPYLHESNGRVVVNASV---------ENWLPLPRMSLYASAKAALVTFYESL 196
F + GR++ SV N YA++KA ++ S+
Sbjct: 117 FRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQAN---------YAASKAGVIGMARSI 167
Query: 197 RFELNDEVGIT---IATHGWIGIEMTK 220
EL+ +T +A G+I +MT+
Sbjct: 168 ARELSKA-NVTANVVAP-GYIDTDMTR 192
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 3e-06
Identities = 45/228 (19%), Positives = 79/228 (34%), Gaps = 40/228 (17%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE------V 98
++ KV ITGA+ G A A+ A++V + + + +Y + V
Sbjct: 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAI----DLCRQQPNLDYAQGSPEELKETV 99
Query: 99 TLVSLNNKESKA------------------------VDHLVNTASLGHTFFFEEVTDTSI 134
LV + A +D LV+ + + +TD
Sbjct: 100 RLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTD-QQ 158
Query: 135 FPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTF 192
+ +L N G + LP + E G V+ +S P S YA++K +
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGL 218
Query: 193 YESLRFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEERE 238
SL E+ I + + + G + EM + +L+ RE
Sbjct: 219 MLSLANEVGRH-NIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRE 265
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 5e-06
Identities = 18/130 (13%), Positives = 42/130 (32%), Gaps = 12/130 (9%)
Query: 1 MDLLNSFLNLVVPPASLVMMAFAWPALCFVN--GCEWLYNNFYSENMEDKVVIITGASSD 58
+ + P + M L +++ K ++ +
Sbjct: 73 ERVFEAVKKRFFGPFRVSCMLD--SNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGP 130
Query: 59 IGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKA-----V 111
+G + A A A +VL R+ ++ Q + D N +V + + + S+A
Sbjct: 131 VGMRSAALLAGEGAEVVLCGRKLDKAQ-AAADSVNKRFKVNVTAAETADDASRAEAVKGA 189
Query: 112 DHLVNTASLG 121
+ ++G
Sbjct: 190 HFVFTAGAIG 199
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 8e-06
Identities = 41/224 (18%), Positives = 75/224 (33%), Gaps = 31/224 (13%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE----NRLQGSTIDEYNP-INEV 98
+ E K +ITG + +G A A+ A++ + R E +T D+ + V
Sbjct: 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66
Query: 99 ---------------------TLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPR 137
+ V+ +D + A + EV + +
Sbjct: 67 EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVES-AQWDE 125
Query: 138 LLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESL 196
++ N G P + + N GR+V +S+ + Y S+K ++ +
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCA 185
Query: 197 RFELNDEVGITI-ATH-GWIGIEMTKGKFMLEDGAEMQWKEERE 238
+L GIT+ A G I MT F+ K +
Sbjct: 186 AHDLVGY-GITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLK 228
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 45.5 bits (109), Expect = 9e-06
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVL-VARRENRLQGSTIDEYNPIN-EVTLVS 102
++ KV ++TGAS IG IA + AK+ AN+V+ A E + +DE + + V
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKAN-EVVDEIKKLGSDAIAVR 60
Query: 103 LNNKESKAVDHLVNTA 118
+ ++ V ++V
Sbjct: 61 ADVANAEDVTNMVKQT 76
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 37/206 (17%), Positives = 64/206 (31%), Gaps = 38/206 (18%)
Query: 31 NGCEWLYNNFYSEN----MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86
+ L ++ +VVI+TGA IG A +A A V+V L G
Sbjct: 7 HHMGTLEAQTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDG 65
Query: 87 STIDEYNPINEV-------------------------TLVSLNNKESKAVDHLVNTASLG 121
S + V L+ + +D LVN A +
Sbjct: 66 SPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV 125
Query: 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-------GRVVVNASVENWL 174
++ F ++ ++ G+ A Y + GR++ +S
Sbjct: 126 RDRMIANTSEEE-FDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184
Query: 175 PLPRMSLYASAKAALVTFYESLRFEL 200
Y++AKA + T E+
Sbjct: 185 GSVGQGNYSAAKAGIATLTLVGAAEM 210
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVL-VARRENRLQGSTIDEYNPIN-EVTLVS 102
K ++TGAS IG IA + A+ N+ + A + + + + ++E + +
Sbjct: 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE-AVVEEIKAKGVDSFAIQ 60
Query: 103 LNNKESKAVDHLVNTA 118
N ++ V ++
Sbjct: 61 ANVADADEVKAMIKEV 76
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 43/206 (20%), Positives = 76/206 (36%), Gaps = 32/206 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE------YNPINE 97
+++ V +ITG +S +G A + A+ VL+ + + + + + P +
Sbjct: 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE-AQAKKLGNNCVFAPAD- 66
Query: 98 VT-------LVSLNNKESKAVDHLVNTASLGHTFFF-----EEVTDTSIFPRLLDINFWG 145
VT ++L + VD VN A + + F R+LD+N G
Sbjct: 67 VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126
Query: 146 --NVYPTFVAL-----PYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRF 198
NV P G ++ ASV + + Y+++K +V +
Sbjct: 127 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIAR 186
Query: 199 ELNDEVGI---TIATHGWIGIEMTKG 221
+L GI TIA G G +
Sbjct: 187 DLAPI-GIRVMTIAP-GLFGTPLLTS 210
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
+ D++ ++TGAS IG IA E A A + + + E V
Sbjct: 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84
Query: 103 LNNKESKAVDHLVNTA 118
+ + V+ L
Sbjct: 85 ADVSQESEVEALFAAV 100
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 3e-05
Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 70/256 (27%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVT 99
+M ++ITG + +G + + R D + +
Sbjct: 18 GSHM--NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIH 75
Query: 100 LVSL--NNKES--------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINF 143
++ + N ++ + ++ L N A + + L N
Sbjct: 76 ILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNT 135
Query: 144 WGNVYPTFVA---LPYLHES-----------NGRVVVN-----ASVENWLPLPRMSLYAS 184
P +A LP L ++ ++N S++ M Y +
Sbjct: 136 VV---PIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG-NTDGGMYAYRT 191
Query: 185 AKAALVTFYESLRFELNDEVGITIATH-GWIGIEMTK----------------------- 220
+K+AL +SL +L + + ++ H GW+ +M
Sbjct: 192 SKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGE 251
Query: 221 ---GKFMLEDGAEMQW 233
G F+ DG + W
Sbjct: 252 KQNGGFVNYDGTPLAW 267
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81
++ KV ++TGA+ IG IA +A+ A +V +
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG 247
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 5e-05
Identities = 6/75 (8%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVSL 103
+V +TG +G I+ + + N + + + ++
Sbjct: 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82
Query: 104 NNKESKAVDHLVNTA 118
+ + ++ +
Sbjct: 83 DVADFESCERCAEKV 97
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 6e-05
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLV 101
+ + V+ITGA+S +G A E A+R A +++ R + + T+ + E+ L
Sbjct: 13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQ 72
Query: 102 SLNN-----KESKAVDHLVNTA 118
L++ D L+N A
Sbjct: 73 DLSSVRRFADGVSGADVLINNA 94
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 7e-05
Identities = 38/205 (18%), Positives = 70/205 (34%), Gaps = 31/205 (15%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE------YNPINE 97
E I++G + +GE +V+ + + + DE + N
Sbjct: 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGK-ALADELGNRAEFVSTN- 84
Query: 98 VT-------LVSLNNKESKAVDHLVNTASLGHTFFF----EEVTDTSIFPRLLDINFWG- 145
VT + N+ + +V G D F + +D+ G
Sbjct: 85 VTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGT 144
Query: 146 -NVYPTFVAL-----PYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199
NV A P + G +V+ AS+ + + YA+AKA ++ + +
Sbjct: 145 YNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARD 204
Query: 200 LNDEVGI---TIATHGWIGIEMTKG 221
L+ GI TIA G + + +
Sbjct: 205 LSSA-GIRVNTIAP-GTMKTPIMES 227
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-04
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVL-VARRENRLQGSTIDEYNP--INEVTLVSLN 104
+ +ITGAS IG IA A+ L + + + + +E V ++ N
Sbjct: 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAE-EVAEEARRRGSPLVAVLGAN 60
Query: 105 NKESKAVDHLVNTA 118
E++A LV+ A
Sbjct: 61 LLEAEAATALVHQA 74
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 3e-04
Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
M ++ +TG IG I K +V + + +++ + +
Sbjct: 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69
Query: 103 LNNKESKAVDHLVNTA 118
N + + +
Sbjct: 70 GNVGDWDSTKQAFDKV 85
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 40.5 bits (96), Expect = 4e-04
Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVL-VARRENRLQGSTIDEYNPIN-EVTLVSLNN 105
VV++TGAS IG+ IA K +++ AR + + + +
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE-EVSKQIEAYGGQAITFGGDV 60
Query: 106 KESKAVDHLVNTA 118
+ V+ ++ TA
Sbjct: 61 SKEADVEAMMKTA 73
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 349 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.98 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.98 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.98 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.97 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.97 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.97 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.96 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.96 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.96 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.96 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.95 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.94 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.94 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.94 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.93 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.93 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.93 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.91 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.91 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.89 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.88 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.88 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.87 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.86 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.86 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.86 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.86 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.86 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.85 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.85 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.85 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.85 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.85 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.85 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.84 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.84 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.84 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.84 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.84 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.84 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.83 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.83 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.82 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.82 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.82 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.82 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.82 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.82 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.82 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.82 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.82 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.82 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.81 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.81 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.81 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.81 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.81 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.81 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.81 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.81 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.81 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.81 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.8 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.8 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.8 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.8 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.79 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.79 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.79 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.79 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.78 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.77 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.77 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.77 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.76 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.76 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.74 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.74 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.73 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.73 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.73 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.73 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.71 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.7 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.7 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.7 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.7 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.7 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.67 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.66 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.65 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.64 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.64 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.62 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.61 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.61 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.6 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.56 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.53 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.51 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.49 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.48 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.43 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.43 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.42 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.41 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.22 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.07 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.98 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.76 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.75 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.75 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.56 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.53 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.47 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.41 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.34 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.31 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.26 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.26 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.25 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.18 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 98.15 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.15 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.15 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.13 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.12 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 98.12 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.11 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.11 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.07 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.05 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.03 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.01 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.0 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.99 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.98 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.98 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.96 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.96 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.95 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.92 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 97.9 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.85 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.84 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.84 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.84 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.84 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.81 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.8 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.78 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.77 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.75 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.75 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.7 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.67 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.66 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.65 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.64 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.63 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.61 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.59 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.56 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.54 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.54 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.53 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.51 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.5 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.49 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.47 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.46 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.46 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.45 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.43 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.43 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.38 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.38 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.36 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.35 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.29 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 97.25 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.21 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.2 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 97.18 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.17 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.16 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.16 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.14 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.13 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.11 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.09 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 97.08 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 97.08 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.07 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.07 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.06 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 97.06 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.04 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.04 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 97.03 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.02 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 97.01 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.01 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.99 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.99 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.98 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.94 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.94 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.92 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.92 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.91 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.88 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.86 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 96.85 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.83 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 96.82 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.81 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.81 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.78 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.77 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 96.74 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 96.72 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 96.72 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.69 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 96.69 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.69 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 96.68 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.66 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.65 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.65 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.64 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 96.63 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.62 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.62 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.62 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.62 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 96.6 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.55 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.54 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 96.53 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 96.51 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.48 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.47 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.41 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.39 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 96.37 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.36 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.33 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.33 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.32 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 96.32 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.32 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 96.3 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 96.29 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.28 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.27 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.23 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.17 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 96.16 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.15 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.13 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.11 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.09 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 96.04 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 95.99 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 95.98 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 95.97 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.83 | |
| 3aoe_E | 419 | Glutamate dehydrogenase; rossmann fold, NADH, oxid | 95.79 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 95.78 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 95.67 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 95.67 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 95.63 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 95.55 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 95.5 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 95.46 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 95.45 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 95.41 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 95.26 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 95.25 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 95.21 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.16 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 95.08 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 94.96 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 94.94 | |
| 1pjq_A | 457 | CYSG, siroheme synthase; rossman fold, nucleotide | 94.89 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 94.88 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 94.86 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 94.84 | |
| 1obb_A | 480 | Maltase, alpha-glucosidase; glycosidase, sulfinic | 94.8 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 94.77 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=362.97 Aligned_cols=223 Identities=23% Similarity=0.257 Sum_probs=197.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++...+.++..+.+| .+++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 37999999999999999999999999999999999999999999999886666788999999 5678
Q ss_pred CCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|+||||||+.. ..++++. +.|+|++++++|+.|+++++|+++|+|++++ |+|||+||+++..+.|+.++|++||
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~-~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK 161 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEV-SDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK 161 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred CCCCEEEECCcccCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence 99999999999875 4667776 5699999999999999999999999997654 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+.+|+|+||.|++++ ||||+|+||+++|+|........+...........+.++..+|||+|++++||+++..+|+|
T Consensus 162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iT 241 (254)
T 4fn4_A 162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVN 241 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence 99999999999999999 99999999999999987654433332233334445678999999999999999999988876
Q ss_pred c
Q 039397 266 F 266 (349)
Q Consensus 266 ~ 266 (349)
.
T Consensus 242 G 242 (254)
T 4fn4_A 242 G 242 (254)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=352.97 Aligned_cols=224 Identities=21% Similarity=0.243 Sum_probs=187.9
Q ss_pred hccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------
Q 039397 38 NNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN------------- 104 (349)
Q Consensus 38 ~~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------------- 104 (349)
...|++.|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.+...+.+|
T Consensus 20 ~~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 20 FQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEK 96 (273)
T ss_dssp -----CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred hhhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHH
Confidence 345667799999999999999999999999999999999999999999888777 3456778888
Q ss_pred -cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhH
Q 039397 105 -NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
.+++|+||+||||||+....++.+. +.|+|++++++|+.|+++++|+++|+|++ +|+||++||+++..+.|+.++|+
T Consensus 97 ~~~~~G~iDiLVNNAG~~~~~~~~~~-~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-~G~IInisS~~~~~~~~~~~~Y~ 174 (273)
T 4fgs_A 97 VKAEAGRIDVLFVNAGGGSMLPLGEV-TEEQYDDTFDRNVKGVLFTVQKALPLLAR-GSSVVLTGSTAGSTGTPAFSVYA 174 (273)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCTTSC-CHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEEEEEECCGGGGSCCTTCHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhc-cHHHHHHHHHHHhHHHHHHHHHHHHHHhh-CCeEEEEeehhhccCCCCchHHH
Confidence 4678999999999999999999987 46999999999999999999999999965 68999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh---hhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE---MQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
+||+|+.+|+|+||.|++++ ||||+|+||+++|++........+... .+......+.++..+|||+|++++||+++
T Consensus 175 asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd 254 (273)
T 4fgs_A 175 ASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASD 254 (273)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999999999999 999999999999999876543322211 11223456788999999999999999999
Q ss_pred CCceEEc
Q 039397 260 GDTYVKF 266 (349)
Q Consensus 260 ~~~~i~~ 266 (349)
..+|||.
T Consensus 255 ~a~~iTG 261 (273)
T 4fgs_A 255 DSSFVTG 261 (273)
T ss_dssp GGTTCCS
T ss_pred hhcCccC
Confidence 9888864
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-49 Score=354.06 Aligned_cols=220 Identities=17% Similarity=0.192 Sum_probs=197.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++...+.++..+.+| .+++|
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 7899999999999999999999999999999999999999999988886666788889998 56789
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++|+||||||+....++.+. +.|+|++++++|+.|+++++|+++|+|++ ++|+|||+||.++..+.|+.++|++||+
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~-~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa 164 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVEL-ELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKG 164 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence 99999999999999999987 56999999999999999999999999954 3589999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
|+.+|+|+||.|++++ ||||+|+||+++|+|.+..... .....+.....+.++..+|||+|++++||+++..+|+|.
T Consensus 165 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG 242 (255)
T 4g81_D 165 GIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED--KQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYING 242 (255)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC--HHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC--HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence 9999999999999999 9999999999999997654322 112233345668889999999999999999999888764
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-49 Score=347.98 Aligned_cols=218 Identities=22% Similarity=0.185 Sum_probs=188.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCccee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHL 114 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvl 114 (349)
+|+||+++||||++|||+++|+.|+++|++|++++|+.+ ++..+.+...+.++..+.+| ..++|++|+|
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 789999999999999999999999999999999999864 33444554455678888998 2346899999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAALVTF 192 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 192 (349)
|||||+....++.+.+ .++|++++++|+.|+++++|+++|+|+++ +|+|||+||+++..+.++.++|++||+|+.+|
T Consensus 84 VNNAGi~~~~~~~~~~-~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~l 162 (247)
T 4hp8_A 84 VNNAGIIRRADSVEFS-ELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGL 162 (247)
T ss_dssp EECCCCCCCCCGGGCC-HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCccccc-HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHH
Confidence 9999999999999874 69999999999999999999999999654 49999999999999999999999999999999
Q ss_pred HHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 193 YESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 193 ~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+|+||.|++++ ||||+|+||+++|+|.+...... ...+......+.++..+|||+|++++||+++..+|||.
T Consensus 163 tr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~--~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG 235 (247)
T 4hp8_A 163 TKLLANEWAAKGINVNAIAPGYIETNNTEALRADA--ARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHG 235 (247)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH--HHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCH--HHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 99999999999 99999999999999986532211 11222234567889999999999999999999988864
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-48 Score=343.06 Aligned_cols=211 Identities=23% Similarity=0.296 Sum_probs=180.6
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCccee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHL 114 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvl 114 (349)
++||+++||||++|||+++|++|+++|++|++++|+++++++. ....+..+.+| .+++|++|+|
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiL 82 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP------RHPRIRREELDITDSQRLQRLFEALPRLDVL 82 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC------CCTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh------hcCCeEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 5999999999999999999999999999999999998876642 23467778888 5678999999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYE 194 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~ 194 (349)
|||||+.. ++.+. +.++|++++++|+.|+++++|+++|+|++++|+|||+||+++..+.++.++|++||+|+.+|+|
T Consensus 83 VNNAGi~~--~~~~~-~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr 159 (242)
T 4b79_A 83 VNNAGISR--DREEY-DLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTR 159 (242)
T ss_dssp EECCCCCC--GGGGG-SHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHH
T ss_pred EECCCCCC--CcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHH
Confidence 99999864 45565 5689999999999999999999999998888999999999999999999999999999999999
Q ss_pred HHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 195 SLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 195 ~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+|+.|++++ ||||+|+||+++|||.+......+ ..+......+.++..+|||+|++++||+++..+|+|.
T Consensus 160 ~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~--~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG 230 (242)
T 4b79_A 160 SLACEYAAERIRVNAIAPGWIDTPLGAGLKADVE--ATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTG 230 (242)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCCC-----CCCHH--HHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHH--HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccC
Confidence 999999999 999999999999999876533221 2222344567889999999999999999999888864
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-48 Score=346.26 Aligned_cols=223 Identities=18% Similarity=0.119 Sum_probs=183.9
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|+++|+||+++||||++|||+++|++|+++|++|++++|++++.+.. +++...+.++..+.+| .+
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFL-DALAQRQPRATYLPVELQDDAQCRDAVAQTIA 79 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHH-HHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHH-HHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence 66789999999999999999999999999999999999998875433 3343334567888888 56
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
++|++|+||||||+..... .+. +.|+|++++++|+.|+++++|+++|+|++++|+|||+||+++..+.|+..+|++||
T Consensus 80 ~~G~iDiLVNnAGi~~~~~-~~~-~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asK 157 (258)
T 4gkb_A 80 TFGRLDGLVNNAGVNDGIG-LDA-GRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASK 157 (258)
T ss_dssp HHSCCCEEEECCCCCCCCC-TTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCC-ccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHH
Confidence 7899999999999875544 454 45899999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh--hhhHHHHhhh-cCCCCHHHHHHHHHHHHhcCCc
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE--MQWKEEREVH-VAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+|+.+|+|+||.|++++ ||||+|+||+++|+|.+......+..+ ........+. ++..+|||+|++++||+++..+
T Consensus 158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~ 237 (258)
T 4gkb_A 158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRAS 237 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 99999999999999999 999999999999999876543222111 1111223344 4889999999999999999988
Q ss_pred eEEc
Q 039397 263 YVKF 266 (349)
Q Consensus 263 ~i~~ 266 (349)
|+|.
T Consensus 238 ~iTG 241 (258)
T 4gkb_A 238 HTTG 241 (258)
T ss_dssp TCCS
T ss_pred CccC
Confidence 8764
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-46 Score=329.96 Aligned_cols=204 Identities=19% Similarity=0.258 Sum_probs=179.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
+|+||||||++|||+++|++|+++|++|++++|+++++++..++ ..+...+.+| .+++|++|
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----RPNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 49999999999999999999999999999999998877655443 4567888888 46789999
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTF 192 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 192 (349)
+||||||+....++.+. +.|+|++++++|+.|+++++|+++|+|++++|+|||+||+++..+.|+..+|++||+|+.+|
T Consensus 78 iLVNNAG~~~~~~~~~~-~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~l 156 (247)
T 3ged_A 78 VLVNNACRGSKGILSSL-LYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVAL 156 (247)
T ss_dssp EEEECCCCCCCCGGGTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHH
Confidence 99999999998998887 56999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 193 YESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 193 ~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+||.|+++.||||+|+||+++|++.+.... ......+.++..+|||+|++++||+++ +|+|
T Consensus 157 tk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~--------~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iT 219 (247)
T 3ged_A 157 THALAMSLGPDVLVNCIAPGWINVTEQQEFTQ--------EDCAAIPAGKVGTPKDISNMVLFLCQQ--DFIT 219 (247)
T ss_dssp HHHHHHHHTTTSEEEEEEECSBCCCC---CCH--------HHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCC
T ss_pred HHHHHHHHCCCCEEEEEecCcCCCCCcHHHHH--------HHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCC
Confidence 99999999877999999999999998765321 123345778999999999999999984 4554
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=323.10 Aligned_cols=221 Identities=17% Similarity=0.132 Sum_probs=188.9
Q ss_pred CCCCCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEec--------------
Q 039397 42 SENMEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLN-------------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d-------------- 104 (349)
+++|+||+++||||+| |||+++|++|+++|++|++++|+++.++++.+.+.. ...++..+++|
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3589999999999875 999999999999999999999999988888777643 34567888888
Q ss_pred cccCCCcceeeecCcCCCCc----cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCch
Q 039397 105 NKESKAVDHLVNTASLGHTF----FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~ 180 (349)
.+++|++|+||||||+.... .+.+. +.++|+..+++|+.+++.+++++.|+|+ ++|+|||+||+++..+.|+..
T Consensus 81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~~~~~vn~~~~~~~~~~~~~~~~-~~G~IVnisS~~~~~~~~~~~ 158 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIAFANMEDLRGRFSET-SREGFLLAQDISSYSLTIVAHEAKKLMP-EGGSIVATTYLGGEFAVQNYN 158 (256)
T ss_dssp HHHHCCCSEEEECCCCCCGGGGTSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHTTCT-TCEEEEEEECGGGTSCCTTTH
T ss_pred HHHhCCCCEEEeccccccccccccccccC-CHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCEEEEEeccccccCcccch
Confidence 46679999999999987543 33444 4588999999999999999999999885 469999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+.+|+|+|+.|++++ ||||+|+||+++|++.+.....+ ...+......+.++..+|||+|++++||+++
T Consensus 159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd 236 (256)
T 4fs3_A 159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFN--TILKEIKERAPLKRNVDQVEVGKTAAYLLSD 236 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH--HHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999999999999999 99999999999999987643221 1222334556788999999999999999999
Q ss_pred CCceEEc
Q 039397 260 GDTYVKF 266 (349)
Q Consensus 260 ~~~~i~~ 266 (349)
..+|+|.
T Consensus 237 ~a~~iTG 243 (256)
T 4fs3_A 237 LSSGVTG 243 (256)
T ss_dssp GGTTCCS
T ss_pred hhcCccC
Confidence 8888764
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=326.58 Aligned_cols=212 Identities=21% Similarity=0.205 Sum_probs=174.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|+||++|||||++|||+++|++|+++|++|++++|++++... +...+++| .+++|
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLP----------EELFVEADLTTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSC----------TTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCC----------cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 7899999999999999999999999999999999998653211 12245566 56789
Q ss_pred CcceeeecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCC-CchhhHHH
Q 039397 110 AVDHLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLP-RMSLYASA 185 (349)
Q Consensus 110 ~iDvlVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~-~~~~Y~as 185 (349)
++|+||||||+... +++.+. +.|+|++++++|+.|+++++|+++|+|++++ |+||++||+++..+.| +...|++|
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~-~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~as 156 (261)
T 4h15_A 78 GVDVIVHMLGGSSAAGGGFSAL-SDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAA 156 (261)
T ss_dssp SCSEEEECCCCCCCCSSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHH
T ss_pred CCCEEEECCCCCccCCCCcccC-CHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHH
Confidence 99999999998643 467776 4699999999999999999999999997654 9999999999999987 67999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc-------hhhhh---HHHHhhhcCCCCHHHHHHHHH
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG-------AEMQW---KEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~~edvA~~i~ 254 (349)
|+|+.+|+++|+.|++++ ||||+|+||+++|++.......... ...+. .....+.++..+|||+|++++
T Consensus 157 Kaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~ 236 (261)
T 4h15_A 157 KAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIA 236 (261)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 999999999999999999 9999999999999987543211000 00000 112346789999999999999
Q ss_pred HHHhcCCceEEc
Q 039397 255 SGACRGDTYVKF 266 (349)
Q Consensus 255 ~l~~~~~~~i~~ 266 (349)
||+++..+|+|.
T Consensus 237 fLaS~~a~~itG 248 (261)
T 4h15_A 237 FLASDRAASITG 248 (261)
T ss_dssp HHHSGGGTTCCS
T ss_pred HHhCchhcCccC
Confidence 999998888764
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=308.30 Aligned_cols=224 Identities=21% Similarity=0.251 Sum_probs=188.1
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEec--------------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVTLVSLN-------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d-------------- 104 (349)
+++++++|+++||||++|||+++|++|+++|++|++++|+.+++++...++. .....+..+.+|
T Consensus 2 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (265)
T 3lf2_A 2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC 81 (265)
T ss_dssp -CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999998888777763 334458888888
Q ss_pred cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhH
Q 039397 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++...|+
T Consensus 82 ~~~~g~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 160 (265)
T 3lf2_A 82 ERTLGCASILVNNAGQGRVSTFAET-TDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATS 160 (265)
T ss_dssp HHHHCSCSEEEECCCCCCCBCTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhH
Confidence 3456899999999999888888776 569999999999999999999999999765 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc---hhhhhH---HH--HhhhcCCCCHHHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG---AEMQWK---EE--REVHVAGGPVEDFARLIV 254 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~---~~--~~~~~~~~~~edvA~~i~ 254 (349)
+||+|+++|+++++.|++++ |+||+|+||+++|++.......... ....+. .. ..+.++..+|||+|++++
T Consensus 161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~ 240 (265)
T 3lf2_A 161 AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAIL 240 (265)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHH
Confidence 99999999999999999998 9999999999999987543221110 001111 11 146678999999999999
Q ss_pred HHHhcCCceEE
Q 039397 255 SGACRGDTYVK 265 (349)
Q Consensus 255 ~l~~~~~~~i~ 265 (349)
+++++..++++
T Consensus 241 fL~s~~~~~it 251 (265)
T 3lf2_A 241 FLASPLSAYTT 251 (265)
T ss_dssp HHHSGGGTTCC
T ss_pred HHhCchhcCcC
Confidence 99998777664
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=308.87 Aligned_cols=223 Identities=20% Similarity=0.199 Sum_probs=188.5
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+.+++||++|||||++|||+++|++|+++|++|++++|++++++++..++...+..+..+.+| .+.
T Consensus 3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999999998888886666778888888 345
Q ss_pred CCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccc-cCCCCchhhHH
Q 039397 108 SKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENW-LPLPRMSLYAS 184 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~-~~~~~~~~Y~a 184 (349)
+|++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||..+. .+.++...|++
T Consensus 83 ~g~iD~lvnnAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 161 (280)
T 3tox_A 83 FGGLDTAFNNAGALGAMGEISSL-SVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAA 161 (280)
T ss_dssp HSCCCEEEECCCCCCSCSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHH
T ss_pred cCCCCEEEECCCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHH
Confidence 689999999999874 4666665 568999999999999999999999999765 4899999999998 78899999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++....................+.++..+|||+|+++++++++..++
T Consensus 162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~ 241 (280)
T 3tox_A 162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASF 241 (280)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccC
Confidence 9999999999999999988 999999999999998765322111112222233445678899999999999999987666
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 242 it 243 (280)
T 3tox_A 242 VT 243 (280)
T ss_dssp CC
T ss_pred Cc
Confidence 54
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=306.84 Aligned_cols=220 Identities=19% Similarity=0.202 Sum_probs=188.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
++++++||+++||||++|||+++|++|+++|++|++++|+.+++++...++...+.++..+.+| .+
T Consensus 6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999888887775555678888998 34
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++|++|+||||||+....++ +. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++...|++|
T Consensus 86 ~~g~id~lv~nAg~~~~~~~-~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 163 (256)
T 3gaf_A 86 QFGKITVLVNNAGGGGPKPF-DM-PMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS 163 (256)
T ss_dssp HHSCCCEEEECCCCCCCCCT-TC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCC-CC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence 56899999999999887777 54 568999999999999999999999999765 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++|+++++.|++++ |+||+|+||+++|++...... ...........+.++..+|||+|+++++++++...++
T Consensus 164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~i 240 (256)
T 3gaf_A 164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT---PEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWI 240 (256)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC---HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC---HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCc
Confidence 999999999999999988 999999999999998654321 1111122334466788999999999999999876665
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 241 t 241 (256)
T 3gaf_A 241 S 241 (256)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=303.11 Aligned_cols=216 Identities=13% Similarity=0.131 Sum_probs=170.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|.+++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++..+.+| .+
T Consensus 1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999999999998888875556688899999 23
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
. |++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++|
T Consensus 81 ~-g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 158 (252)
T 3h7a_A 81 H-APLEVTIFNVGANVNFPILET-TDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASA 158 (252)
T ss_dssp H-SCEEEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHH
T ss_pred h-CCceEEEECCCcCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHH
Confidence 4 899999999999888888776 5699999999999999999999999997654 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeE-EEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 186 KAALVTFYESLRFELNDE-VGI-TIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v-~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|+|+++|+++++.|++++ |+| |+|+||+++|++.+...... ........+.+ ..+|||+|+++++++++++..
T Consensus 159 Kaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~ 233 (252)
T 3h7a_A 159 KFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM----FGKDALANPDL-LMPPAAVAGAYWQLYQQPKSA 233 (252)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------CCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhh----hhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhc
Confidence 999999999999999988 999 99999999999987642211 11111223333 889999999999999977654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=302.07 Aligned_cols=218 Identities=21% Similarity=0.266 Sum_probs=185.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++ +.++..+.+| .+.
T Consensus 3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999999999888877665 3467888888 345
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...|++||+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa 157 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQV-SEASYDRQFAVNTKGAFFTVQRLTPLIRE-GGSIVFTSSVADEGGHPGMSVYSASKA 157 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEECCGGGSSBCTTBHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCchHHHHHHH
Confidence 6899999999999888888886 56999999999999999999999999965 589999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch--hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA--EMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+++|+++++.|++++ |+||+|+||+++|++........... .........+.++..+|||+|+++++++++ .+++
T Consensus 158 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~i 236 (255)
T 4eso_A 158 ALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFT 236 (255)
T ss_dssp HHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTC
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCc
Confidence 9999999999999988 99999999999999875422111110 111123345677899999999999999997 6655
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 237 t 237 (255)
T 4eso_A 237 T 237 (255)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=307.06 Aligned_cols=223 Identities=19% Similarity=0.267 Sum_probs=186.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..+..+.+| .+.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46889999999999999999999999999999999999999998888886666788889998 3456
Q ss_pred CCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccccc--CCCCchhhHH
Q 039397 109 KAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWL--PLPRMSLYAS 184 (349)
Q Consensus 109 g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~--~~~~~~~Y~a 184 (349)
|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++.. +.++...|++
T Consensus 104 g~iD~lVnnAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~a 182 (283)
T 3v8b_A 104 GHLDIVVANAGINGVWAPIDDL-KPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTA 182 (283)
T ss_dssp SCCCEEEECCCCCCCBCCTTTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHH
T ss_pred CCCCEEEECCCCCCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHH
Confidence 899999999998654 666665 568999999999999999999999999765 48999999999987 7889999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh---hhhHHHHhhh--cCCCCHHHHHHHHHHHHh
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE---MQWKEEREVH--VAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~edvA~~i~~l~~ 258 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++............ ..+.....+. ++..+|||+|++++++++
T Consensus 183 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s 262 (283)
T 3v8b_A 183 TKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVS 262 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcC
Confidence 9999999999999999998 999999999999999875422111100 1111122233 688899999999999999
Q ss_pred cCCceEEc
Q 039397 259 RGDTYVKF 266 (349)
Q Consensus 259 ~~~~~i~~ 266 (349)
+..++++.
T Consensus 263 ~~a~~itG 270 (283)
T 3v8b_A 263 ERARHVTG 270 (283)
T ss_dssp GGGTTCCS
T ss_pred ccccCCcC
Confidence 88776653
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=301.72 Aligned_cols=215 Identities=24% Similarity=0.245 Sum_probs=185.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++. .....+.+| .+++
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG---DNGKGMALNVTNPESIEAVLKAITDEF 81 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---ccceEEEEeCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999999988887776663 245677888 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 160 (248)
T 3op4_A 82 GGVDILVNNAGITRDNLLMRM-KEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKA 160 (248)
T ss_dssp CCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence 899999999999888888776 569999999999999999999999999754 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++|+++++.|++++ |+||+|+||+++|++.+.... ..........+.++..+|||+|+++++++++...+++
T Consensus 161 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~it 235 (248)
T 3op4_A 161 GVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND----EQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYIT 235 (248)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH----HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCcc
Confidence 9999999999999988 999999999999999765321 1112223344667889999999999999998766654
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=306.12 Aligned_cols=224 Identities=21% Similarity=0.199 Sum_probs=189.4
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|...++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++..+.+| .+
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5567899999999999999999999999999999999999999988888775556678889998 35
Q ss_pred cCCCcceeeecCcCC-CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLG-HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++|++|+||||||+. ...++.+. +.++|++++++|+.|+++++++++|+|++++|+||++||..+..+.++...|++|
T Consensus 85 ~~g~id~lv~nAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 163 (264)
T 3ucx_A 85 AYGRVDVVINNAFRVPSMKPFANT-TFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMA 163 (264)
T ss_dssp HTSCCSEEEECCCSCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHHH
T ss_pred HcCCCcEEEECCCCCCCCCCchhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHHH
Confidence 578999999999985 45666665 5699999999999999999999999998877999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccccc-------chhhhhHHHHhhhcCCCCHHHHHHHHHHHH
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLED-------GAEMQWKEEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
|+|+++|+++++.|++++ |+||+|+||+++|++......... ...........+.++..+|||+|+++++++
T Consensus 164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~ 243 (264)
T 3ucx_A 164 KSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMA 243 (264)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHc
Confidence 999999999999999998 999999999999998754321110 001111123345678899999999999999
Q ss_pred hcCCceEE
Q 039397 258 CRGDTYVK 265 (349)
Q Consensus 258 ~~~~~~i~ 265 (349)
++..++++
T Consensus 244 s~~~~~it 251 (264)
T 3ucx_A 244 SDLASGIT 251 (264)
T ss_dssp SGGGTTCC
T ss_pred CccccCCC
Confidence 98776654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=303.58 Aligned_cols=219 Identities=21% Similarity=0.232 Sum_probs=187.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCC-CeEEEEEec--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI-NEVTLVSLN--------------NK 106 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~-~~~~~~~~d--------------~~ 106 (349)
+++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++..+.+| .+
T Consensus 5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE 84 (262)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999988888774443 578888998 34
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccc-cCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENW-LPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~-~~~~~~~~Y~a 184 (349)
++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++. .+.++...|++
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 163 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATM-TPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGA 163 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHH
Confidence 56899999999999888888776 569999999999999999999999999765 4999999999996 88899999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++..... ...........+.++..+|||+|+++++++++...+
T Consensus 164 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~ 239 (262)
T 3pk0_A 164 TKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG----EEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGY 239 (262)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 9999999999999999988 99999999999999765421 111122233446678899999999999999987666
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 240 it 241 (262)
T 3pk0_A 240 IT 241 (262)
T ss_dssp CC
T ss_pred Cc
Confidence 54
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=301.67 Aligned_cols=221 Identities=20% Similarity=0.279 Sum_probs=186.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+|+||++|||||++|||+++|++|+++|++|++++|+++++++...++...+.++..+.+| .+++
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999999998888886666688889999 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccc-cC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLH-ES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~-~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+ ++ +|+||++||..+..+.++...|++||
T Consensus 82 g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 160 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDL-SVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK 160 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence 899999999999888888776 5699999999999999999999999994 33 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 187 AALVTFYESLRFELN-DE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 187 aal~~l~~~la~el~-~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+|+++|+++++.|++ ++ |+||+|+||+++|++........+. .........+.++..+|||+|+++++++++..+++
T Consensus 161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i 239 (257)
T 3imf_A 161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEE-MAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYI 239 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------C-CSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence 999999999999997 55 9999999999999976543211111 11112233456788999999999999999876655
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 240 t 240 (257)
T 3imf_A 240 N 240 (257)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=301.01 Aligned_cols=218 Identities=18% Similarity=0.163 Sum_probs=188.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++||++|||||++|||+++|++|+++|++|+++ +|+++++++...++...+.++..+.+| .+.+|
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999997 899888888888776666678889998 34568
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||+|
T Consensus 82 ~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 160 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMEL-EETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA 160 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence 99999999999888888876 4689999999999999999999999997654 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++|+++++.|++++ |+||+|+||+++|++.+...... ..........+.++..+|||+|+++++++++..++++
T Consensus 161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~it 236 (258)
T 3oid_A 161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRE--DLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIR 236 (258)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHH--HHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCC
T ss_pred HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcc
Confidence 999999999999988 99999999999999886542211 1122223345677899999999999999998877654
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=307.71 Aligned_cols=220 Identities=17% Similarity=0.216 Sum_probs=190.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+.++..+.+| .+.+
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 57899999999999999999999999999999999999999888888775555678888888 3557
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+
T Consensus 102 g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKa 180 (271)
T 4ibo_A 102 IDVDILVNNAGIQFRKPMIEL-ETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKG 180 (271)
T ss_dssp CCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCchhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHH
Confidence 899999999999888888876 468999999999999999999999999764 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++|+++++.|++++ |+||+|+||+++|++.+..... .....+.....+.++..+|||+|+++++++++...+++
T Consensus 181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~it 257 (271)
T 4ibo_A 181 GIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--PEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVN 257 (271)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--HHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence 9999999999999988 9999999999999987643211 11222334455678899999999999999998766654
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=304.77 Aligned_cols=225 Identities=16% Similarity=0.190 Sum_probs=183.8
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC----------------cchhhhHHHHhcCCCCeEEEEEe
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR----------------ENRLQGSTIDEYNPINEVTLVSL 103 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~----------------~~~l~~~~~~~~~~~~~~~~~~~ 103 (349)
.|+.+++||+++||||++|||+++|++|+++|++|++++|+ .+++++...++...+..+..+.+
T Consensus 4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (286)
T 3uve_A 4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEV 83 (286)
T ss_dssp --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEc
Confidence 36678999999999999999999999999999999999987 45566666666555667888999
Q ss_pred c--------------cccCCCcceeeecCcCCCCcc-ccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEE
Q 039397 104 N--------------NKESKAVDHLVNTASLGHTFF-FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVV 166 (349)
Q Consensus 104 d--------------~~~~g~iDvlVnnAg~~~~~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~ 166 (349)
| .+.+|++|+||||||+..... +.+. +.++|++++++|+.|+++++++++|+|+++ +|+||+
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~ 162 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKT-SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL 162 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 8 345689999999999987765 5555 568999999999999999999999999764 489999
Q ss_pred EeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc-----c--ccchhhhhH----
Q 039397 167 NASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM-----L--EDGAEMQWK---- 234 (349)
Q Consensus 167 isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~-----~--~~~~~~~~~---- 234 (349)
+||.++..+.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++...... . .........
T Consensus 163 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (286)
T 3uve_A 163 TSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQ 242 (286)
T ss_dssp ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH
T ss_pred ECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHH
Confidence 9999999999999999999999999999999999988 999999999999999764210 0 000000000
Q ss_pred -HHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 235 -EEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 235 -~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
....+ .+..+|||+|+++++++++..++++.
T Consensus 243 ~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG 274 (286)
T 3uve_A 243 MFHTLP-IPWVEPIDISNAVLFFASDEARYITG 274 (286)
T ss_dssp TTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred hhhccC-CCcCCHHHHHHHHHHHcCccccCCcC
Confidence 01112 57889999999999999988777653
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=307.49 Aligned_cols=221 Identities=25% Similarity=0.245 Sum_probs=187.4
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
.|+.++++|++|||||++|||+++|++|+++|++|++++|+++++++...++...+..+..+.+| .
T Consensus 21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 45667999999999999999999999999999999999999998888777764444567778888 3
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ +|+||++||.++..+.++...|++
T Consensus 101 ~~~g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 179 (270)
T 3ftp_A 101 KEFGALNVLVNNAGITQDQLAMRM-KDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAA 179 (270)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHH
Confidence 456899999999999888877776 468999999999999999999999999654 589999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++..... ...........+.++..+|||+|+++++++++...+
T Consensus 180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~ 255 (270)
T 3ftp_A 180 AKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP----QEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGY 255 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC----HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCC
Confidence 9999999999999999988 99999999999999875421 111112233345678889999999999999887665
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 256 it 257 (270)
T 3ftp_A 256 IT 257 (270)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=300.82 Aligned_cols=216 Identities=21% Similarity=0.296 Sum_probs=186.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++||+++||||++|||+++|++|+++|++|++++|+.+++++...++ +.++..+.+| .+.+
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 5789999999999999999999999999999999999999888877766 3467778888 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||..+..+.++...|++||
T Consensus 79 g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 157 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDV-DLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK 157 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence 899999999999888888776 569999999999999999999999999764 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++++.|++++ |+||+|+||+++|++...... ...........+.++..+|||+|+++++++++..++++
T Consensus 158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~it 234 (247)
T 3rwb_A 158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH---NEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWIT 234 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG---GGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh---hHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCC
Confidence 99999999999999988 999999999999998764321 11112222335567889999999999999998877665
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=299.12 Aligned_cols=226 Identities=19% Similarity=0.204 Sum_probs=188.5
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEec----------ccc
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVTLVSLN----------NKE 107 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d----------~~~ 107 (349)
.|.++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++. .....+..+.+| .++
T Consensus 3 ~m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (267)
T 3t4x_A 3 AMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK 82 (267)
T ss_dssp CCCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred ccccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh
Confidence 46778999999999999999999999999999999999999998888777662 224567778888 356
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 161 (267)
T 3t4x_A 83 YPKVDILINNLGIFEPVEYFDI-PDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATK 161 (267)
T ss_dssp CCCCSEEEECCCCCCCCCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHH
Confidence 7899999999999888888886 4689999999999999999999999997655 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc--------cchhhhhHHH---HhhhcCCCCHHHHHHHHH
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE--------DGAEMQWKEE---REVHVAGGPVEDFARLIV 254 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~edvA~~i~ 254 (349)
+|+++|+++++.|++++ |+||+|+||+++|++........ ++....+... ..+.++..+|||+|++++
T Consensus 162 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~ 241 (267)
T 3t4x_A 162 TMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVT 241 (267)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHH
Confidence 99999999999999998 99999999999999754321100 0000111111 123578899999999999
Q ss_pred HHHhcCCceEEc
Q 039397 255 SGACRGDTYVKF 266 (349)
Q Consensus 255 ~l~~~~~~~i~~ 266 (349)
+++++..++++.
T Consensus 242 fL~s~~~~~itG 253 (267)
T 3t4x_A 242 FLSSPLSSAING 253 (267)
T ss_dssp HHHSGGGTTCCS
T ss_pred HHcCccccCccC
Confidence 999987766643
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=294.34 Aligned_cols=218 Identities=26% Similarity=0.309 Sum_probs=183.4
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+.++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++...+.++..+.+| .+.
T Consensus 2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 2 PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp -CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999988887777764444567888888 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+|++|+||||||+...+++.+. +.++|++++++|+.|+++++++++|+|++++|+||++||.++..+.++...|++||+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 160 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDA-DTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKF 160 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHH
Confidence 5899999999999877777776 568999999999999999999999999765699999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCC--CCHHHHHHHHHHHHhcCCceE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~edvA~~i~~l~~~~~~~i 264 (349)
|+++|+++++.|++++ |+||+|+||+++|++...... .. ...... ..+ .+. .+|||+|+.+++++++.+.++
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~-~~~-~~~~~~~pedvA~~v~~l~s~~~~~~ 235 (247)
T 2jah_A 161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH--TA-TKEMYE-QRI-SQIRKLQAQDIAEAVRYAVTAPHHAT 235 (247)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC--HH-HHHHHH-HHT-TTSCCBCHHHHHHHHHHHHHSCTTEE
T ss_pred HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc--hh-hHHHHH-hcc-cccCCCCHHHHHHHHHHHhCCCccCc
Confidence 9999999999999988 999999999999998654211 10 001111 112 344 899999999999999988776
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 236 ~ 236 (247)
T 2jah_A 236 V 236 (247)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=294.97 Aligned_cols=203 Identities=20% Similarity=0.157 Sum_probs=168.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
|++|+++||||++|||+++|++|+++|++|++++|+++++++...++. ..+..+.+| .+.+|+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 467999999999999999999999999999999999998888777762 257888888 344689
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
+|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++|+||++||.++..+.++...|++||+|++
T Consensus 78 id~lvnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~ 156 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPVGVY-TAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMR 156 (235)
T ss_dssp CSEEEEECCCC------CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChHhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHH
Confidence 9999999999887777776 468999999999999999999999999887889999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC-ceE
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD-TYV 264 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~-~~i 264 (349)
+|+++++.|++++ |+||+|+||+++|++...... ....+..+|||+|+.+++++++++ .++
T Consensus 157 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------------~~~~~~~~pedvA~~v~~l~~~~~~~~i 219 (235)
T 3l6e_A 157 GFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-------------VDPSGFMTPEDAAAYMLDALEARSSCHV 219 (235)
T ss_dssp HHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------CBCHHHHHHHHHHHTCCCSSEEE
T ss_pred HHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-------------CCCcCCCCHHHHHHHHHHHHhCCCCcce
Confidence 9999999999988 999999999999998764311 112378899999999999999654 444
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=307.95 Aligned_cols=224 Identities=17% Similarity=0.143 Sum_probs=188.6
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------------cC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------------ES 108 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------------~~ 108 (349)
..+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++...+..+..+.+|.. +.
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 34689999999999999999999999999999999999999988888777555667888899821 12
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.+....|++||+
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 186 (275)
T 4imr_A 108 APVDILVINASAQINATLSAL-TPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKA 186 (275)
T ss_dssp SCCCEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHH
Confidence 799999999999888888776 569999999999999999999999999765 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
|+++|+++++.|++++ |+||+|+||+++|++....................+.++..+|||+|+++++++++..++++.
T Consensus 187 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG 266 (275)
T 4imr_A 187 AQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTG 266 (275)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCC
Confidence 9999999999999988 999999999999998654321111111111122226778999999999999999988776653
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-41 Score=305.15 Aligned_cols=225 Identities=17% Similarity=0.188 Sum_probs=182.8
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-------------CcchhhhHHHHhcCCCCeEEEEEec--
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-------------RENRLQGSTIDEYNPINEVTLVSLN-- 104 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-------------~~~~l~~~~~~~~~~~~~~~~~~~d-- 104 (349)
.|+.+++||+++||||++|||+++|++|+++|++|++++| +.+++++....+...+..+..+.+|
T Consensus 4 ~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 83 (277)
T 3tsc_A 4 SMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR 83 (277)
T ss_dssp ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 3566899999999999999999999999999999999998 4556666666654445678888888
Q ss_pred ------------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEecc
Q 039397 105 ------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASV 170 (349)
Q Consensus 105 ------------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~ 170 (349)
.+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~ 162 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDI-TPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA 162 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccH
Confidence 3456899999999999888887776 569999999999999999999999999764 4899999999
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc-------cchhhhhHHHHhhhcC
Q 039397 171 ENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE-------DGAEMQWKEEREVHVA 242 (349)
Q Consensus 171 ~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 242 (349)
++..+.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++........ ............+ .+
T Consensus 163 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r 241 (277)
T 3tsc_A 163 AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP-DW 241 (277)
T ss_dssp GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS-CS
T ss_pred hhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC-CC
Confidence 999999999999999999999999999999988 99999999999999875411000 0000000011112 25
Q ss_pred CCCHHHHHHHHHHHHhcCCceEEc
Q 039397 243 GGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 243 ~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
..+|||+|+++++++++..++++.
T Consensus 242 ~~~pedvA~~v~~L~s~~~~~itG 265 (277)
T 3tsc_A 242 VAEPEDIADTVCWLASDESRKVTA 265 (277)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred CCCHHHHHHHHHHHhCccccCCcC
Confidence 789999999999999988776653
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=304.73 Aligned_cols=222 Identities=18% Similarity=0.169 Sum_probs=184.9
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCC---eEEEEEec------------
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN---EVTLVSLN------------ 104 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~---~~~~~~~d------------ 104 (349)
.|++++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...+. .+.++.+|
T Consensus 4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 83 (281)
T 3svt_A 4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVD 83 (281)
T ss_dssp ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHH
T ss_pred CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 467789999999999999999999999999999999999999998888877744333 78888888
Q ss_pred --cccCCCcceeeecCcC-CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCch
Q 039397 105 --NKESKAVDHLVNTASL-GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 --~~~~g~iDvlVnnAg~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~ 180 (349)
.+.+|++|+||||||+ ....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++..
T Consensus 84 ~~~~~~g~id~lv~nAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 162 (281)
T 3svt_A 84 AVTAWHGRLHGVVHCAGGSENIGPITQV-DSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFG 162 (281)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCT
T ss_pred HHHHHcCCCCEEEECCCcCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCCh
Confidence 3456899999999998 445566665 568999999999999999999999999754 48999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+++|+++++.|++++ |+||+|+||+++|++....... ...........+.++..+|||+|+++++++++
T Consensus 163 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~ 240 (281)
T 3svt_A 163 AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES--AELSSDYAMCTPLPRQGEVEDVANMAMFLLSD 240 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC--HHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSG
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99999999999999999999988 9999999999999987543211 11112223345667889999999999999998
Q ss_pred CCceE
Q 039397 260 GDTYV 264 (349)
Q Consensus 260 ~~~~i 264 (349)
...++
T Consensus 241 ~~~~i 245 (281)
T 3svt_A 241 AASFV 245 (281)
T ss_dssp GGTTC
T ss_pred ccCCC
Confidence 65544
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=301.16 Aligned_cols=226 Identities=17% Similarity=0.223 Sum_probs=187.0
Q ss_pred hccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcCCCCeEEEEEec------------
Q 039397 38 NNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYNPINEVTLVSLN------------ 104 (349)
Q Consensus 38 ~~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~~~~~~~~~~~d------------ 104 (349)
..+++.+++||++|||||++|||+++|++|+++|++|++++++ .+.++++.+++...+.++..+.+|
T Consensus 9 ~~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 9 ETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp --CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred cccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 3456678999999999999999999999999999999998775 455666666665555678889998
Q ss_pred --cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc-cccCCCCchh
Q 039397 105 --NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE-NWLPLPRMSL 181 (349)
Q Consensus 105 --~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~-~~~~~~~~~~ 181 (349)
.+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.. +..+.++...
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~ 166 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDV-TEEEFDRVFSLNTRGQFFVAREAYRHLTE-GGRIVLTSSNTSKDFSVPKHSL 166 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHCCT-TCEEEEECCTTTTTCCCTTCHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCeEEEEeCchhccCCCCCCch
Confidence 3456899999999999988888876 56999999999999999999999999976 78999999988 6678899999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc--------ccchhhhhHHHHhhhcCCCCHHHHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML--------EDGAEMQWKEEREVHVAGGPVEDFARL 252 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~edvA~~ 252 (349)
|++||+|+++|+++++.|++++ |+||+|+||+++|++....... .............+.++..+|||+|++
T Consensus 167 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 246 (270)
T 3is3_A 167 YSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANV 246 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 9999999999999999999988 9999999999999987532110 011111222334567789999999999
Q ss_pred HHHHHhcCCceEE
Q 039397 253 IVSGACRGDTYVK 265 (349)
Q Consensus 253 i~~l~~~~~~~i~ 265 (349)
+++++++..++++
T Consensus 247 v~~L~s~~~~~it 259 (270)
T 3is3_A 247 VGFLVSKEGEWVN 259 (270)
T ss_dssp HHHHTSGGGTTCC
T ss_pred HHHHcCCccCCcc
Confidence 9999998877665
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=299.82 Aligned_cols=219 Identities=18% Similarity=0.204 Sum_probs=182.3
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
.|+.+++||+++||||++|||+++|++|+++|++|++++|+++++++...++ +..+..+.+| .
T Consensus 4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 4 SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTI 80 (271)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHH
Confidence 4667899999999999999999999999999999999999999988877776 3456777888 3
Q ss_pred ccCCCcceeeecCcCCC--CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhh
Q 039397 106 KESKAVDHLVNTASLGH--TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y 182 (349)
+.+|++|+||||||+.. ...+.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|
T Consensus 81 ~~~g~id~lv~nAg~~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y 159 (271)
T 3tzq_B 81 DTFGRLDIVDNNAAHSDPADMLVTQM-TVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAY 159 (271)
T ss_dssp HHHSCCCEEEECCCCCCTTCCCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHH
Confidence 45689999999999873 3445554 5689999999999999999999999997654 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++||+|+++|+++++.|++++ |+||+|+||+++|++...... ...........+.++..+|||+|+++++++++..
T Consensus 160 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~ 236 (271)
T 3tzq_B 160 ACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP---QPIVDIFATHHLAGRIGEPHEIAELVCFLASDRA 236 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C---HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 999999999999999999988 999999999999998763221 1111222333456788899999999999999876
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
.+++
T Consensus 237 ~~it 240 (271)
T 3tzq_B 237 AFIT 240 (271)
T ss_dssp TTCC
T ss_pred CCcC
Confidence 6543
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=304.90 Aligned_cols=220 Identities=18% Similarity=0.205 Sum_probs=183.5
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
..+++||++|||||++|||+++|++|+++|++|++++|+++++++...++ +..+..+.+| .++
T Consensus 24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999888877766 3456778888 345
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++...|++||
T Consensus 101 ~g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 179 (277)
T 3gvc_A 101 FGGVDKLVANAGVVHLASLIDT-TVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSK 179 (277)
T ss_dssp HSSCCEEEECCCCCCCBCTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHH
Confidence 6899999999999888888776 569999999999999999999999999754 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh---hhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE---MQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+|+++|+++++.|++++ |+||+|+||+++|++.+.......... ........+.++..+|||+|+++++++++...
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~ 259 (277)
T 3gvc_A 180 AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDAS 259 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccC
Confidence 99999999999999988 999999999999998654221111000 01111144567899999999999999998766
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 260 ~it 262 (277)
T 3gvc_A 260 MIT 262 (277)
T ss_dssp TCC
T ss_pred Ccc
Confidence 654
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=302.67 Aligned_cols=225 Identities=20% Similarity=0.236 Sum_probs=179.5
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcC-CCCeEEEEEec-------------
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYN-PINEVTLVSLN------------- 104 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~-~~~~~~~~~~d------------- 104 (349)
++.++|++|++|||||++|||+++|++|+++|++|++++| +.+.+++...++.. ....+..+.+|
T Consensus 18 ~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 97 (281)
T 3v2h_A 18 LYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM 97 (281)
T ss_dssp ----CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred hhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence 3456899999999999999999999999999999999999 55667766666633 35678888888
Q ss_pred -cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhh
Q 039397 105 -NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y 182 (349)
.+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++.+.|
T Consensus 98 ~~~~~g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 176 (281)
T 3v2h_A 98 VADRFGGADILVNNAGVQFVEKIEDF-PVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAY 176 (281)
T ss_dssp HHHHTSSCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred HHHHCCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHH
Confidence 3557899999999999888888776 4689999999999999999999999997654 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch------h--hhhHHHHhhhcCCCCHHHHHHHH
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA------E--MQWKEEREVHVAGGPVEDFARLI 253 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~edvA~~i 253 (349)
++||+|+++|+++++.|++++ |+||+|+||+++|++........... . ........+.++..+|||+|+++
T Consensus 177 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v 256 (281)
T 3v2h_A 177 VAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLA 256 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence 999999999999999999988 99999999999999976533211100 0 01112234567889999999999
Q ss_pred HHHHhcCCceEE
Q 039397 254 VSGACRGDTYVK 265 (349)
Q Consensus 254 ~~l~~~~~~~i~ 265 (349)
++++++...+++
T Consensus 257 ~~L~s~~a~~it 268 (281)
T 3v2h_A 257 LYLAGDDAAQIT 268 (281)
T ss_dssp HHHHSSGGGGCC
T ss_pred HHHcCCCcCCCC
Confidence 999998776654
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=303.43 Aligned_cols=222 Identities=16% Similarity=0.163 Sum_probs=183.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-------------CcchhhhHHHHhcCCCCeEEEEEec----
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-------------RENRLQGSTIDEYNPINEVTLVSLN---- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-------------~~~~l~~~~~~~~~~~~~~~~~~~d---- 104 (349)
+.+++||+++||||++|||+++|++|+++|++|++++| +.+++++...++...+..+..+.+|
T Consensus 10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD 89 (280)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence 45789999999999999999999999999999999998 5666777777776666778888888
Q ss_pred ----------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEecccc
Q 039397 105 ----------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVEN 172 (349)
Q Consensus 105 ----------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~ 172 (349)
.+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWEL-TDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG 168 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence 3456899999999999888888886 569999999999999999999999999764 589999999999
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc-----ccchhhhh-HHHHhhhcCCCC
Q 039397 173 WLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML-----EDGAEMQW-KEEREVHVAGGP 245 (349)
Q Consensus 173 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~ 245 (349)
..+.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++....... ........ .....+. +..+
T Consensus 169 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~ 247 (280)
T 3pgx_A 169 LKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFMT 247 (280)
T ss_dssp TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCBC
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCCC
Confidence 9999999999999999999999999999988 9999999999999987531100 00000000 0011122 5789
Q ss_pred HHHHHHHHHHHHhcCCceEE
Q 039397 246 VEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 246 ~edvA~~i~~l~~~~~~~i~ 265 (349)
|||+|+++++++++..++++
T Consensus 248 p~dvA~~v~~L~s~~~~~it 267 (280)
T 3pgx_A 248 ADEVADVVAWLAGDGSGTLT 267 (280)
T ss_dssp HHHHHHHHHHHHSGGGTTCS
T ss_pred HHHHHHHHHHHhCccccCCC
Confidence 99999999999998776654
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=303.97 Aligned_cols=220 Identities=22% Similarity=0.216 Sum_probs=187.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d--------------~~~ 107 (349)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++..+.+| .+.
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999988887776632 34578888998 344
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++...|++|
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 174 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDT-DPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTS 174 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHH
Confidence 5799999999999888888776 568999999999999999999999999764 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++|+++++.|++++ |+||+|+||+++|++........ ..........+.++..+|||+|+++++++++..+++
T Consensus 175 K~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~i 252 (266)
T 4egf_A 175 KAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDE--AKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMI 252 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSH--HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccCh--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence 999999999999999988 99999999999999865432111 111112233466788999999999999999877665
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 253 t 253 (266)
T 4egf_A 253 N 253 (266)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=297.78 Aligned_cols=215 Identities=23% Similarity=0.266 Sum_probs=174.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
+++|++|||||++|||+++|++|+++|++|++++|++++++++..++...+..+..+.+| .+.+|+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999999999999999988888875556678888888 345689
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++...|++||+|+
T Consensus 82 iD~lVnnAG~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 160 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAV-KVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV 160 (264)
T ss_dssp CCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence 9999999999888888876 569999999999999999999999999754 48999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
++|+++++.|+ +.|+||+|+||+++|++.......... . ..........+|||+|+++++++++.+.+++.
T Consensus 161 ~~l~~~la~e~-~gIrvn~v~PG~v~T~~~~~~~~~~~~---~--~~~~~~~~~~~pedvA~~v~~l~s~~~~~~~~ 231 (264)
T 3tfo_A 161 RAISDGLRQES-TNIRVTCVNPGVVESELAGTITHEETM---A--AMDTYRAIALQPADIARAVRQVIEAPQSVDTT 231 (264)
T ss_dssp HHHHHHHHHHC-SSEEEEEEEECCC----------------------------CCCHHHHHHHHHHHHHSCTTEEEE
T ss_pred HHHHHHHHHhC-CCCEEEEEecCCCcCcccccccchhHH---H--HHHhhhccCCCHHHHHHHHHHHhcCCccCccc
Confidence 99999999998 369999999999999997653221111 0 00111123579999999999999999876543
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=298.92 Aligned_cols=221 Identities=19% Similarity=0.254 Sum_probs=186.2
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|+.++++|++|||||++|||+++|++|+++|++|++++|+.+++++...++ ...+..+.+| .+
T Consensus 2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 455789999999999999999999999999999999999999888877776 2356778888 35
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ +|+||++||.++..+.++...|++
T Consensus 79 ~~g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 157 (259)
T 4e6p_A 79 HAGGLDILVNNAALFDLAPIVEI-TRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA 157 (259)
T ss_dssp HSSSCCEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence 67899999999999888888776 569999999999999999999999999754 589999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc-------cccchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM-------LEDGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++...... ..............+.++..+|||+|++++++
T Consensus 158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L 237 (259)
T 4e6p_A 158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFL 237 (259)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999988 999999999999998653200 00111122223445677899999999999999
Q ss_pred HhcCCceEE
Q 039397 257 ACRGDTYVK 265 (349)
Q Consensus 257 ~~~~~~~i~ 265 (349)
+++...+++
T Consensus 238 ~s~~~~~it 246 (259)
T 4e6p_A 238 ASAESDYIV 246 (259)
T ss_dssp TSGGGTTCC
T ss_pred hCCccCCCC
Confidence 998766654
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-40 Score=303.03 Aligned_cols=227 Identities=16% Similarity=0.205 Sum_probs=183.9
Q ss_pred hccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC------------cchhhhHHHHhcCCCCeEEEEEec-
Q 039397 38 NNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR------------ENRLQGSTIDEYNPINEVTLVSLN- 104 (349)
Q Consensus 38 ~~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~------------~~~l~~~~~~~~~~~~~~~~~~~d- 104 (349)
+..|+.+++||+++||||++|||+++|++|+++|++|++++|+ .+++++...++...+.++..+.+|
T Consensus 19 p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 98 (299)
T 3t7c_A 19 PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV 98 (299)
T ss_dssp ---CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC
Confidence 4456678999999999999999999999999999999999987 455666666664455678889999
Q ss_pred -------------cccCCCcceeeecCcCCCCcc-ccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEe
Q 039397 105 -------------NKESKAVDHLVNTASLGHTFF-FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNA 168 (349)
Q Consensus 105 -------------~~~~g~iDvlVnnAg~~~~~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~is 168 (349)
.+.+|++|+||||||+..... +.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++|
T Consensus 99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~is 177 (299)
T 3t7c_A 99 RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRM-DPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTS 177 (299)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 345689999999999987765 5555 569999999999999999999999998654 48999999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc-----c--ccchhhhh-----HH
Q 039397 169 SVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM-----L--EDGAEMQW-----KE 235 (349)
Q Consensus 169 S~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~-----~--~~~~~~~~-----~~ 235 (349)
|.++..+.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++...... . ........ ..
T Consensus 178 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (299)
T 3t7c_A 178 SIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM 257 (299)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHH
T ss_pred ChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhh
Confidence 99999999999999999999999999999999988 999999999999999764210 0 00000000 01
Q ss_pred HHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 236 EREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 236 ~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
...+ .+..+|||+|+++++++++..++++.
T Consensus 258 ~~~p-~r~~~pedvA~~v~fL~s~~a~~itG 287 (299)
T 3t7c_A 258 HVLP-IPYVEPADISNAILFLVSDDARYITG 287 (299)
T ss_dssp SSSS-CSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred cccC-cCCCCHHHHHHHHHHHhCcccccCcC
Confidence 1112 56789999999999999988776653
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=300.92 Aligned_cols=218 Identities=21% Similarity=0.232 Sum_probs=184.4
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcCCCCeEEEEEec--------------
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNPINEVTLVSLN-------------- 104 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~~~~~~~~~~~d-------------- 104 (349)
++.++++||+++||||++|||+++|++|+++|++|++++| +.+.++++.+++...+..+..+.+|
T Consensus 21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4456889999999999999999999999999999999999 5566666666664445678888898
Q ss_pred cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhH
Q 039397 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
.+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|+
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 179 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRM-KRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYS 179 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHH
Confidence 3456899999999999888887776 569999999999999999999999999754 58999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc-CC
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR-GD 261 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~-~~ 261 (349)
+||+|+++|+++++.|++++ |+||+|+||+++|++...... .......+.++..+|||+|+++++++++ ..
T Consensus 180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~ 252 (269)
T 4dmm_A 180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-------EKLLEVIPLGRYGEAAEVAGVVRFLAADPAA 252 (269)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-------HHHGGGCTTSSCBCHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-------HHHHhcCCCCCCCCHHHHHHHHHHHhCCccc
Confidence 99999999999999999988 999999999999998764211 1122344667899999999999999998 44
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
.+++
T Consensus 253 ~~it 256 (269)
T 4dmm_A 253 AYIT 256 (269)
T ss_dssp GGCC
T ss_pred CCCc
Confidence 4443
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=301.75 Aligned_cols=220 Identities=19% Similarity=0.241 Sum_probs=185.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
++++++|+++||||++|||+++|++|+++|++|++++|+++++++...++ +..+..+.+| .+.
T Consensus 22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999998888777664 3457788888 345
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||
T Consensus 99 ~g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 177 (277)
T 4dqx_A 99 WGRVDVLVNNAGFGTTGNVVTI-PEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASK 177 (277)
T ss_dssp HSCCCEEEECCCCCCCBCTTTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHH
Confidence 6899999999999888888776 4689999999999999999999999997654 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhh--hhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEM--QWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+|+++|+++++.|++++ |+||+|+||+++|++............. .......+.++..+|||+|+++++++++..++
T Consensus 178 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~ 257 (277)
T 4dqx_A 178 GAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRF 257 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCC
Confidence 99999999999999988 9999999999999984332211111011 11223345678889999999999999987665
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 258 it 259 (277)
T 4dqx_A 258 AT 259 (277)
T ss_dssp CC
T ss_pred Cc
Confidence 54
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=300.76 Aligned_cols=222 Identities=15% Similarity=0.179 Sum_probs=181.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC------------cchhhhHHHHhcCCCCeEEEEEec------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR------------ENRLQGSTIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~------------~~~l~~~~~~~~~~~~~~~~~~~d------ 104 (349)
.+++||+++||||++|||+++|++|+++|++|++++|+ .+++++....+...+.++..+.+|
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA 85 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 47899999999999999999999999999999999997 344555555554445678888888
Q ss_pred --------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccC
Q 039397 105 --------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLP 175 (349)
Q Consensus 105 --------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~ 175 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEV-ESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA 164 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence 3456899999999999888887776 568999999999999999999999999754 489999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc-----cc--cchhhhh----HHHHhhhcCC
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM-----LE--DGAEMQW----KEEREVHVAG 243 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~-----~~--~~~~~~~----~~~~~~~~~~ 243 (349)
.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++...... .. ....... ........+.
T Consensus 165 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (281)
T 3s55_A 165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence 9999999999999999999999999988 999999999999999764210 00 0000000 0111122578
Q ss_pred CCHHHHHHHHHHHHhcCCceEE
Q 039397 244 GPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 244 ~~~edvA~~i~~l~~~~~~~i~ 265 (349)
.+|||+|+++++++++...+++
T Consensus 245 ~~p~dvA~~v~~L~s~~~~~it 266 (281)
T 3s55_A 245 LKPEEVTRAVLFLVDEASSHIT 266 (281)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCC
T ss_pred CCHHHHHHHHHHHcCCcccCCC
Confidence 8999999999999998766654
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=299.79 Aligned_cols=218 Identities=21% Similarity=0.181 Sum_probs=176.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+.++||++|||||++|||+++|++|+++|++|++++ |+.+.++++..++...+.++..+.+| .+.
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999985 45566666666665455678888888 345
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...|++||+
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa 180 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAET-GDAVFDRVIAVNLKGTFNTLREAAQRLRV-GGRIINMSTSQVGLLHPSYGIYAAAKA 180 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCeEEEEeChhhccCCCCchHHHHHHH
Confidence 6899999999999888888886 46899999999999999999999999965 589999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++|+++++.|++++ |+||+|+||+++|++........ .........+.++..+|||+|+++++++++...+++
T Consensus 181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it 256 (267)
T 3u5t_A 181 GVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE---VRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVN 256 (267)
T ss_dssp HHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCC
T ss_pred HHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 9999999999999988 99999999999999875432111 111222334667889999999999999998877665
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-40 Score=297.62 Aligned_cols=217 Identities=21% Similarity=0.244 Sum_probs=179.7
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
.|..++.+|++|||||++|||+++|++|+++|++|++++|+.+++++... ..+..+.+| .
T Consensus 9 ~m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (266)
T 3p19_A 9 QMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL------PNTLCAQVDVTDKYTFDTAITRAE 82 (266)
T ss_dssp ------CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc------CCceEEEecCCCHHHHHHHHHHHH
Confidence 45567889999999999999999999999999999999999877654321 256777888 3
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a 161 (266)
T 3p19_A 83 KIYGPADAIVNNAGMMLLGQIDTQ-EANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCG 161 (266)
T ss_dssp HHHCSEEEEEECCCCCCCCCTTTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHCCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHH
Confidence 456899999999999888887776 568999999999999999999999999754 499999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++........ ..........+.++..+|||+|+++++++++++..
T Consensus 162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~ 239 (266)
T 3p19_A 162 TKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQ--IKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNV 239 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHH--HHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchh--hhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCc
Confidence 9999999999999999988 99999999999999976532111 01112222346678999999999999999998876
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 240 ~~ 241 (266)
T 3p19_A 240 CI 241 (266)
T ss_dssp EE
T ss_pred cc
Confidence 54
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-40 Score=302.65 Aligned_cols=220 Identities=23% Similarity=0.235 Sum_probs=188.4
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCC-CeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI-NEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~-~~~~~~~~d--------------~ 105 (349)
++.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ ..+..+.+| .
T Consensus 35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999999998888875443 578888998 3
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccc-cCCCCchhhH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENW-LPLPRMSLYA 183 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~-~~~~~~~~Y~ 183 (349)
+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||..+. .+.++...|+
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~ 193 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTM-TPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYG 193 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHH
Confidence 456899999999999888888776 569999999999999999999999999765 4999999999996 8889999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++|+++++.|++++ |+||+|+||+++|++..... ...........+.++..+|||+|+++++++++...
T Consensus 194 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~ 269 (293)
T 3rih_A 194 ASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG----EEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAG 269 (293)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccc
Confidence 99999999999999999988 99999999999999765321 11111123344667888999999999999998766
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 270 ~it 272 (293)
T 3rih_A 270 YIT 272 (293)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=296.73 Aligned_cols=218 Identities=21% Similarity=0.247 Sum_probs=173.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
++++||+++||||++|||+++|++|+++|++|+++ +|+.+..++..+++...+..+..+.+| .++
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999 556666676666765556678888998 345
Q ss_pred CCCcceeeecCcCC-CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-cCCCCchhhHHH
Q 039397 108 SKAVDHLVNTASLG-HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-LPLPRMSLYASA 185 (349)
Q Consensus 108 ~g~iDvlVnnAg~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-~~~~~~~~Y~as 185 (349)
+|++|+||||||+. ...++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++. .+.++...|++|
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~as 161 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEM-DEAFWHQVLDVNLTSLFLTAKTALPKMAK-GGAIVTFSSQAGRDGGGPGALAYATS 161 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEECCHHHHHCCSTTCHHHHHH
T ss_pred hCCCCEEEECCCccCCCCChhhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEcCHHhccCCCCCcHHHHHH
Confidence 68999999999987 55566665 56899999999999999999999999976 6899999999998 788999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 186 KAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+|+++|+++++.|++++|+||+|+||+++|++........ .........+.++..+|||+|+++++++++...+++
T Consensus 162 Kaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~it 238 (259)
T 3edm_A 162 KGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPE---VRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVT 238 (259)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------CCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChH---HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence 99999999999999987799999999999999986542211 111122344667889999999999999998766554
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=302.82 Aligned_cols=222 Identities=19% Similarity=0.160 Sum_probs=184.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++..+.+| .+.+
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 34678999999999999999999999999999999999999988888886666778889998 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcc--ccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP--YLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp--~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++| .|+++ .|+||++||.++..+.++...|++|
T Consensus 100 g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as 178 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADL-DDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTAS 178 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHH
Confidence 899999999999888888776 5689999999999999999999999 56654 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc-------ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHH
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML-------EDGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
|+|+++|+++++.|++++ |+||+|+||+++|++.+..... .............+.++..+|||+|+++++++
T Consensus 179 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~ 258 (279)
T 3sju_A 179 KHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLV 258 (279)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence 999999999999999988 9999999999999986542110 01111111223345678899999999999999
Q ss_pred hcCCceEE
Q 039397 258 CRGDTYVK 265 (349)
Q Consensus 258 ~~~~~~i~ 265 (349)
++...+++
T Consensus 259 s~~a~~it 266 (279)
T 3sju_A 259 TDAAASIT 266 (279)
T ss_dssp SSGGGGCC
T ss_pred CccccCcC
Confidence 98776654
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=300.38 Aligned_cols=220 Identities=21% Similarity=0.188 Sum_probs=186.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------cccC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------NKES 108 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------~~~~ 108 (349)
.++++||+++||||++|||+++|++|+++|++|++++|+ +++++...++...+..+..+.+| .+++
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 357899999999999999999999999999999999965 55566666665566788888998 2334
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||+
T Consensus 105 g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 183 (273)
T 3uf0_A 105 RRVDVLVNNAGIIARAPAEEV-SLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKH 183 (273)
T ss_dssp SCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCCchhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHH
Confidence 799999999999888888876 5699999999999999999999999997654 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++|+++++.|++++ |+||+|+||+++|++....... ...........+.++..+|||+|+++++++++..++++
T Consensus 184 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~it 260 (273)
T 3uf0_A 184 AVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD--DERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVH 260 (273)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS--HHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence 9999999999999988 9999999999999987543211 11112223345667899999999999999998766654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=303.62 Aligned_cols=223 Identities=20% Similarity=0.136 Sum_probs=187.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEec--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLN--------------NK 106 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d--------------~~ 106 (349)
+.+++||+++||||++|||+++|++|+++|++|++++|+.+++++...++. ..+.++..+.+| .+
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 446899999999999999999999999999999999999988877776662 224568888888 34
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++...|++|
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 180 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGAL-SFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSA 180 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHH
T ss_pred HcCCCCEEEECCcCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence 56899999999999888888776 569999999999999999999999998654 5899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++|+++++.|++++ |+||+|+||+++|++........ ...........+.++..+|||+|+++++++++..+++
T Consensus 181 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~i 259 (277)
T 4fc7_A 181 KAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP-QASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYV 259 (277)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCC-HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCC-HHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence 999999999999999988 99999999999998643221111 1112222334567789999999999999999877666
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
+.
T Consensus 260 tG 261 (277)
T 4fc7_A 260 TG 261 (277)
T ss_dssp CS
T ss_pred CC
Confidence 53
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=300.40 Aligned_cols=221 Identities=19% Similarity=0.180 Sum_probs=167.3
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
|+.++++|+++||||++|||+++|++|+++|++|++++| +.+++++..+++...+.++..+.+| .
T Consensus 23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (280)
T 4da9_A 23 MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV 102 (280)
T ss_dssp CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred hhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 445789999999999999999999999999999999996 6667777777765455678889998 3
Q ss_pred ccCCCcceeeecCcC--CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCCc
Q 039397 106 KESKAVDHLVNTASL--GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~~ 179 (349)
+.+|++|+||||||+ ....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++.
T Consensus 103 ~~~g~iD~lvnnAg~~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~ 181 (280)
T 4da9_A 103 AEFGRIDCLVNNAGIASIVRDDFLDL-KPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER 181 (280)
T ss_dssp HHHSCCCEEEEECC------CCGGGC-CHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred HHcCCCCEEEECCCccccCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence 445799999999998 445667776 468999999999999999999999999653 4799999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
..|++||+|+++|+++++.|++++ |+||+|+||+++|++........ .........+.++..+|||+|++++++++
T Consensus 182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~p~~r~~~pedvA~~v~~L~s 258 (280)
T 4da9_A 182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY---DGLIESGLVPMRRWGEPEDIGNIVAGLAG 258 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CCBCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH---HHHHhhcCCCcCCcCCHHHHHHHHHHHhC
Confidence 999999999999999999999998 99999999999999976542111 11111224566788999999999999999
Q ss_pred cCCceEE
Q 039397 259 RGDTYVK 265 (349)
Q Consensus 259 ~~~~~i~ 265 (349)
+..++++
T Consensus 259 ~~~~~it 265 (280)
T 4da9_A 259 GQFGFAT 265 (280)
T ss_dssp STTGGGT
T ss_pred ccccCCC
Confidence 8876654
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=302.26 Aligned_cols=219 Identities=27% Similarity=0.337 Sum_probs=182.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC---eEEEEecCcchhhhHHHHhcC--CCCeEEEEEec-------------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA---NLVLVARRENRLQGSTIDEYN--PINEVTLVSLN------------- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~---~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d------------- 104 (349)
.+++||++|||||++|||+++|++|+++|+ +|++++|+.++++++.+++.. .+.++..+.+|
T Consensus 29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 468999999999999999999999999998 999999999998888777632 35578888998
Q ss_pred -cccCCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchh
Q 039397 105 -NKESKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~ 181 (349)
.+++|++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~ 187 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQI-ATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSI 187 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHH
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCch
Confidence 355689999999999876 4556665 568999999999999999999999999754 499999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++||+|+++|+++++.|++++ |+||+|+||+++|++.......... . ...........+|||+|++++++++++
T Consensus 188 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~---~-~~~~~~~~~p~~pedvA~~v~~l~s~~ 263 (287)
T 3rku_A 188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEE---Q-AKNVYKDTTPLMADDVADLIVYATSRK 263 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHH---H-HHHHHTTSCCEEHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHH---H-HHHhhcccCCCCHHHHHHHHHHHhCCC
Confidence 9999999999999999999988 9999999999999985432111111 0 111112223558999999999999999
Q ss_pred CceEEc
Q 039397 261 DTYVKF 266 (349)
Q Consensus 261 ~~~i~~ 266 (349)
+.+++.
T Consensus 264 ~~~i~g 269 (287)
T 3rku_A 264 QNTVIA 269 (287)
T ss_dssp TTEEEE
T ss_pred CCeEec
Confidence 888753
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=299.18 Aligned_cols=216 Identities=23% Similarity=0.254 Sum_probs=175.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+.+++||+++||||++|||+++|++|+++|++|++++|+++++++...++ +.++..+.+| .+.
T Consensus 22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999998888776665 3467888888 344
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||.++..+.++...|++||
T Consensus 99 ~g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 177 (266)
T 3grp_A 99 MEGIDILVNNAGITRDGLFVRM-QDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAK 177 (266)
T ss_dssp HTSCCEEEECCCCC-----CCC-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHH
Confidence 6899999999999887777776 468999999999999999999999999764 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++++.|++++ |+||+|+||+++|++.+... ...........+.++..+|||+|+++++++++..++++
T Consensus 178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~it 253 (266)
T 3grp_A 178 AGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN----EKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLT 253 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC----HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence 99999999999999988 99999999999999876531 11112223345667889999999999999998776654
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=295.53 Aligned_cols=218 Identities=24% Similarity=0.255 Sum_probs=184.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
..+++||++|||||++|||+++|++|+++|++|++++++. ++++++..++...+.++..+.+| .+
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999997764 55666666665455678888888 34
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-CCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-LPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-~~~~~~Y~as 185 (349)
.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||..+..+ .++...|++|
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-~g~iv~isS~~~~~~~~~~~~~Y~as 183 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEET-TVADFDEVMAVNFRAPFVAIRSASRHLGD-GGRIITIGSNLAELVPWPGISLYSAS 183 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHCCT-TCEEEEECCGGGTCCCSTTCHHHHHH
T ss_pred HcCCCcEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEEEEEeChhhccCCCCCchHHHHH
Confidence 56899999999999888888886 56999999999999999999999999964 689999999877665 7899999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++|+++++.|++++ |+||+|+||+++|++...... .........+.++..+|||+|+++++++++..+++
T Consensus 184 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~i 258 (271)
T 3v2g_A 184 KAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD-----HAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFV 258 (271)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS-----SHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch-----hHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCc
Confidence 999999999999999988 999999999999998764211 12222334566788999999999999999877766
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
+.
T Consensus 259 tG 260 (271)
T 3v2g_A 259 TG 260 (271)
T ss_dssp CS
T ss_pred cC
Confidence 53
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=300.08 Aligned_cols=242 Identities=18% Similarity=0.217 Sum_probs=193.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++..+.+| .+.+|
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999999999999999999988887775555678888998 24457
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++|+||||||+...+++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++.+.|++||+
T Consensus 108 ~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 186 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQM-NHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKY 186 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHH
Confidence 99999999999988888776 568999999999999999999999999754 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch------hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA------EMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|+++|+++++.|++++ |+|++|+||+++|++........... ...............+|||+|+.++.++.++
T Consensus 187 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 187 GVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999988 99999999999999875321100000 0000011112235789999999999999999
Q ss_pred CceEEcCchHH--HHHHHHHhchHHHHH
Q 039397 261 DTYVKFPSWYD--VFLLYRVFAPHVLNW 286 (349)
Q Consensus 261 ~~~i~~p~~~~--~~~~~~~~~P~~~~~ 286 (349)
+.++..+.... +...+....|.+-++
T Consensus 267 ~~~i~~g~~~~~~~~~~~~~~~~~~~~~ 294 (301)
T 3tjr_A 267 RLYILPHAAARESIRRRFERIDRTFDEQ 294 (301)
T ss_dssp CSEECCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 98887665443 223444444444333
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-40 Score=297.99 Aligned_cols=217 Identities=21% Similarity=0.257 Sum_probs=186.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++..+.+| .+++
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999999999999988888775555678888888 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCC--CCchhhHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPL--PRMSLYAS 184 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~--~~~~~Y~a 184 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+. ++.+.|++
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~a 186 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDM-PLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCT 186 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHH
Confidence 899999999999888888876 569999999999999999999999999765 3899999999998764 36789999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++.+.... .........+.++..+|||+|+++++++++..++
T Consensus 187 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-----~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~ 261 (276)
T 3r1i_A 187 SKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-----YHALWEPKIPLGRMGRPEELTGLYLYLASAASSY 261 (276)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-----GHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-----HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence 9999999999999999988 999999999999998764311 1111233446678899999999999999987766
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 262 it 263 (276)
T 3r1i_A 262 MT 263 (276)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=293.66 Aligned_cols=216 Identities=19% Similarity=0.190 Sum_probs=183.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+.+|+++||||++|||+++|++|+++|++|++++|+ .+++++..+++...+.++..+.+| .+++|
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999885 466676666665455678888888 34568
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+|
T Consensus 82 ~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (246)
T 3osu_A 82 SLDVLVNNAGITRDNLLMRM-KEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG 160 (246)
T ss_dssp CCCEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence 99999999999888777776 568999999999999999999999999654 5899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++|+++++.|++++ |+||+|+||+++|++.+.... ..........+..+..+|||+|+++++++++...+++
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~it 234 (246)
T 3osu_A 161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD----ELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYIT 234 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH----HHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence 999999999999988 999999999999998765321 1112223344667889999999999999998766554
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=299.30 Aligned_cols=215 Identities=20% Similarity=0.206 Sum_probs=173.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d--------------~~~ 107 (349)
.+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.. ....+..+.+| .++
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE 108 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999988887776632 23335788888 345
Q ss_pred CCCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC---CCeEEEEeccccccCCCCchhhH
Q 039397 108 SKAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES---NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++...|+
T Consensus 109 ~g~iD~lvnnAG~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~ 187 (281)
T 4dry_A 109 FARLDLLVNNAGSNVPPVPLEEV-TFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT 187 (281)
T ss_dssp HSCCSEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred cCCCCEEEECCCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHH
Confidence 6899999999998755 566665 569999999999999999999999999765 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++|+++++.|++++ |+||+|+||+++|++.+........ .....+..+..+|||+|++++++++++..
T Consensus 188 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 188 ATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQ-----ANGEVAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEEC-----TTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhh-----hhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence 99999999999999999988 9999999999999998754221111 01122345788999999999999998765
Q ss_pred e
Q 039397 263 Y 263 (349)
Q Consensus 263 ~ 263 (349)
.
T Consensus 263 ~ 263 (281)
T 4dry_A 263 A 263 (281)
T ss_dssp E
T ss_pred C
Confidence 4
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=294.76 Aligned_cols=211 Identities=19% Similarity=0.232 Sum_probs=177.4
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEec----------------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLN---------------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d---------------- 104 (349)
...++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.. ....+..+.+|
T Consensus 7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999988887766622 22245566666
Q ss_pred cccCCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhh
Q 039397 105 NKESKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y 182 (349)
.+.+|++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y 165 (252)
T 3f1l_A 87 AVNYPRLDGVLHNAGLLGDVCPMSEQ-NPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAY 165 (252)
T ss_dssp HHHCSCCSEEEECCCCCCCCSCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHH
T ss_pred HHhCCCCCEEEECCccCCCCCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchh
Confidence 245689999999999854 4566665 5689999999999999999999999997654 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 183 ASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++||+|+++|+++++.|++++|+||+|+||+++|++........ ...+..+|||+|+.+++++++..+
T Consensus 166 ~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~~~------------~~~~~~~p~dva~~~~~L~s~~~~ 233 (252)
T 3f1l_A 166 AASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTE------------DPQKLKTPADIMPLYLWLMGDDSR 233 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCTTC------------CGGGSBCTGGGHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCCcc------------chhccCCHHHHHHHHHHHcCcccc
Confidence 99999999999999999987799999999999999864322111 112567899999999999998876
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 234 ~it 236 (252)
T 3f1l_A 234 RKT 236 (252)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=293.17 Aligned_cols=210 Identities=24% Similarity=0.224 Sum_probs=171.8
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC---CCCeEEEEEec-------------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN---PINEVTLVSLN------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~---~~~~~~~~~~d------------- 104 (349)
|++++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.. ....+..+.+|
T Consensus 1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (250)
T 3nyw_A 1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD 80 (250)
T ss_dssp ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999988887776622 22567788888
Q ss_pred -cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhh
Q 039397 105 -NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y 182 (349)
.+.+|++|+||||||+....++ +. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.+....|
T Consensus 81 ~~~~~g~iD~lvnnAg~~~~~~~-~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 158 (250)
T 3nyw_A 81 IHQKYGAVDILVNAAAMFMDGSL-SE-PVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIY 158 (250)
T ss_dssp HHHHHCCEEEEEECCCCCCCCCC-SC-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHH
T ss_pred HHHhcCCCCEEEECCCcCCCCCC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcch
Confidence 3456899999999999877776 44 568999999999999999999999999754 4999999999999977779999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++||+|+++|+++++.|++++ |+||+|+||+++|++.+..... .+..+..+|||+|+++++++++..
T Consensus 159 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~------------~~~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 159 GSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTP------------FKDEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCC------------SCGGGSBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCC------------cccccCCCHHHHHHHHHHHHcCCC
Confidence 999999999999999999988 9999999999999986542211 123467899999999999999887
Q ss_pred ceE
Q 039397 262 TYV 264 (349)
Q Consensus 262 ~~i 264 (349)
..+
T Consensus 227 ~~~ 229 (250)
T 3nyw_A 227 NVC 229 (250)
T ss_dssp TEE
T ss_pred ceE
Confidence 654
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=294.01 Aligned_cols=211 Identities=18% Similarity=0.157 Sum_probs=164.2
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|+++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++ +..+..+.+| .+
T Consensus 1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999998887766554 3456778888 34
Q ss_pred cCCCcceeeecCcCCCCcccc----ccCCcchHHHHHHhHhhhhHHHHHHhccccccC-------CCeEEEEeccccccC
Q 039397 107 ESKAVDHLVNTASLGHTFFFE----EVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-------NGRVVVNASVENWLP 175 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------~g~IV~isS~~~~~~ 175 (349)
++|++|+||||||+.....+. +. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+
T Consensus 78 ~~g~id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~ 156 (257)
T 3tpc_A 78 EFGHVHGLVNCAGTAPGEKILGRSGPH-ALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG 156 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTEEC-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred HcCCCCEEEECCCCCCCCccccccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC
Confidence 568999999999998765543 33 458899999999999999999999999763 589999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhh-cCCCCHHHHHHHH
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVH-VAGGPVEDFARLI 253 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edvA~~i 253 (349)
.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++........ ........+. ++..+|||+|+++
T Consensus 157 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~----~~~~~~~~p~~~r~~~~~dva~~v 232 (257)
T 3tpc_A 157 QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDV----QDALAASVPFPPRLGRAEEYAALV 232 (257)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------CCSSSSCSCBCHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHH----HHHHHhcCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999988 99999999999999976532111 1111122333 6789999999999
Q ss_pred HHHHhc
Q 039397 254 VSGACR 259 (349)
Q Consensus 254 ~~l~~~ 259 (349)
++++++
T Consensus 233 ~~l~s~ 238 (257)
T 3tpc_A 233 KHICEN 238 (257)
T ss_dssp HHHHHC
T ss_pred HHHccc
Confidence 999986
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=289.94 Aligned_cols=218 Identities=21% Similarity=0.249 Sum_probs=188.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
|++++|+++||||++|||+++|++|+++|++|++++|+++++++...++...+.++..+.+| .+.+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 36789999999999999999999999999999999999998888877775555678888888 3457
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||..+..+.++...|++||+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRM-SEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA 159 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence 899999999999888877776 468999999999999999999999998654 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++|+++++.|++++ |+||+|+||+++|++.+.... ..........+.++..+|||+|+++++++++...+++
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~t 234 (247)
T 3lyl_A 160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD----EQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYIT 234 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH----HHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH----HHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCcc
Confidence 9999999999999988 999999999999999875421 1122223344567888999999999999988765543
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=296.59 Aligned_cols=213 Identities=19% Similarity=0.087 Sum_probs=177.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-------hhhHHHHhcCCCCeEEEEEec-----------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-------LQGSTIDEYNPINEVTLVSLN----------- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-------l~~~~~~~~~~~~~~~~~~~d----------- 104 (349)
++++||+++||||++|||+++|++|+++|++|++++|+.++ +++...++...+.++..+.+|
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 57899999999999999999999999999999999999765 344444443345678889998
Q ss_pred ---cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccC--CCC
Q 039397 105 ---NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLP--LPR 178 (349)
Q Consensus 105 ---~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~--~~~ 178 (349)
.+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+ .++
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~ 160 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDT-PMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA 160 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGS-CHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccC-CHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence 3456899999999999888888776 5689999999999999999999999997654 99999999999988 678
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecC-cccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDE-VGITIATHG-WIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
...|++||+|+++|+++++.|++++ |+||+|+|| .++|++...... ....+..+|||+|++++++
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~-------------~~~~~~~~pedvA~~v~~l 227 (274)
T 3e03_A 161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPG-------------VDAAACRRPEIMADAAHAV 227 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------C-------------CCGGGSBCTHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhccc-------------ccccccCCHHHHHHHHHHH
Confidence 8999999999999999999999998 999999999 699998743211 1122467899999999999
Q ss_pred HhcCCceEEcCch
Q 039397 257 ACRGDTYVKFPSW 269 (349)
Q Consensus 257 ~~~~~~~i~~p~~ 269 (349)
+++..++++...+
T Consensus 228 ~s~~~~~itG~~i 240 (274)
T 3e03_A 228 LTREAAGFHGQFL 240 (274)
T ss_dssp HTSCCTTCCSCEE
T ss_pred hCccccccCCeEE
Confidence 9998888775543
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=293.29 Aligned_cols=223 Identities=20% Similarity=0.210 Sum_probs=179.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.+++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...+..+..+.+| .+.
T Consensus 16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 346889999999999999999999999999999999999988887776664334567888888 233
Q ss_pred C-CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 108 S-KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 108 ~-g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
+ |++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++|
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 174 (273)
T 1ae1_A 96 FDGKLNILVNNAGVVIHKEAKDF-TEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS 174 (273)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred cCCCCcEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence 4 899999999999877777776 468999999999999999999999999765 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc--cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE--DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
|+|+++++++++.|++++ |+||+|+||+++|++........ ............+.++..+|||+|+++++++++...
T Consensus 175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~ 254 (273)
T 1ae1_A 175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAAS 254 (273)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 999999999999999987 99999999999999876432210 010111112234566789999999999999987655
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 255 ~~t 257 (273)
T 1ae1_A 255 YIT 257 (273)
T ss_dssp TCC
T ss_pred CcC
Confidence 543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-40 Score=296.35 Aligned_cols=224 Identities=18% Similarity=0.221 Sum_probs=184.9
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|+.++++|+++||||++|||+++|++|+++|++|++++|+.++++++..++...+.++..+.+| .+
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 1 MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR 80 (262)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999988888777775545578888888 23
Q ss_pred cCCCcceeeecCcCC-CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLG-HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.+|++|+||||||+. ...++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 159 (262)
T 1zem_A 81 DFGKIDFLFNNAGYQGAFAPVQDY-PSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGT 159 (262)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHH
Confidence 467999999999987 66677775 468999999999999999999999999764 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcc-----------ccccch-hhhhHHHHhhhcCCCCHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKF-----------MLEDGA-EMQWKEEREVHVAGGPVEDFAR 251 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~-----------~~~~~~-~~~~~~~~~~~~~~~~~edvA~ 251 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++..... ...... .........+.++..+|||+|+
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~ 239 (262)
T 1zem_A 160 SKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPG 239 (262)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHH
T ss_pred HHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 9999999999999999988 99999999999999864310 000010 0111112345678889999999
Q ss_pred HHHHHHhcCCceEE
Q 039397 252 LIVSGACRGDTYVK 265 (349)
Q Consensus 252 ~i~~l~~~~~~~i~ 265 (349)
++++++++...+++
T Consensus 240 ~v~~l~s~~~~~it 253 (262)
T 1zem_A 240 VVAFLLGDDSSFMT 253 (262)
T ss_dssp HHHHHHSGGGTTCC
T ss_pred HHHHHcCchhcCcC
Confidence 99999998766654
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=295.16 Aligned_cols=220 Identities=17% Similarity=0.202 Sum_probs=178.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
|+++||++|||||++|||+++|++|+++|++|++++|+.+++++...+. +..+..+.+| .+.+
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 3688999999999999999999999999999999999998888766654 3467788888 3456
Q ss_pred CCcceeeecCcCCCCcc-cccc---CCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHH
Q 039397 109 KAVDHLVNTASLGHTFF-FEEV---TDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~-~~~~---~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
|++|+||||||+..... +.+. .+.++|++++++|+.|+++++++++|+|++++|+||++||.++..+.++...|++
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 157 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTA 157 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHH
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHH
Confidence 89999999999865433 2221 1235699999999999999999999999877899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccc------hhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 185 AKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDG------AEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
||+|+++|+++++.|++++|+||+|+||+++|++.......... ..........+.++..+|||+|++++++++
T Consensus 158 sKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s 237 (281)
T 3zv4_A 158 TKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFAT 237 (281)
T ss_dssp HHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhc
Confidence 99999999999999998889999999999999987542211110 011222334567889999999999999999
Q ss_pred -cCCceEE
Q 039397 259 -RGDTYVK 265 (349)
Q Consensus 259 -~~~~~i~ 265 (349)
+...+++
T Consensus 238 ~~~~~~it 245 (281)
T 3zv4_A 238 RGDSLPAT 245 (281)
T ss_dssp TTTSTTCS
T ss_pred cccccccc
Confidence 5555554
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=293.58 Aligned_cols=210 Identities=20% Similarity=0.202 Sum_probs=166.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|++|||||++|||+++|++|+++|++|++++|+.+++++...++. .++..+.+| .+.+|
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---DDALCVPTDVTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---SCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999999998888777763 457778888 34568
Q ss_pred CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC---CCeEEEEeccccccCCCCchhhHHH
Q 039397 110 AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES---NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 110 ~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|.|+++ +|+||++||.++..+.++...|++|
T Consensus 102 ~iD~lVnnAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as 180 (272)
T 4dyv_A 102 RVDVLFNNAGTGAPAIPMEDL-TFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTAT 180 (272)
T ss_dssp CCCEEEECCCCCCCSSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhC-CHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHH
Confidence 99999999999765 566665 569999999999999999999999999765 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
|+|+++|+++++.|++++ |+||+|+||+++|++.+........ .....+..+..+|||+|++++++++++..
T Consensus 181 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-----~~~~~~~~~~~~pedvA~~v~fL~s~~~~ 253 (272)
T 4dyv_A 181 KHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQ-----ADLSIKVEPVMDVAHVASAVVYMASLPLD 253 (272)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------CHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchh-----hhhcccccCCCCHHHHHHHHHHHhCCCCc
Confidence 999999999999999988 9999999999999997654221111 11123445788999999999999997654
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=291.51 Aligned_cols=220 Identities=22% Similarity=0.203 Sum_probs=172.4
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
++++++|+++||||++|||+++|++|+++|++|++++|+++++++...++ ...+..+.+| .+.
T Consensus 4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999988877766 3457788888 345
Q ss_pred CCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-----CCeEEEEeccccccCCCCchh
Q 039397 108 SKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-----NGRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~g~IV~isS~~~~~~~~~~~~ 181 (349)
+|++|+||||||+.. ...+.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...
T Consensus 81 ~g~id~li~~Ag~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~ 159 (261)
T 3n74_A 81 FGKVDILVNNAGIGHKPQNAELV-EPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW 159 (261)
T ss_dssp HSCCCEEEECCCCCCCSCCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHH
T ss_pred cCCCCEEEECCccCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccH
Confidence 679999999999876 4555554 568999999999999999999999999754 478999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++||+|+++|+++++.|++++ |+||+|+||+++|++....................+.++..+|||+|+++++++++.
T Consensus 160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~ 239 (261)
T 3n74_A 160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQ 239 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCc
Confidence 9999999999999999999988 999999999999999876532222211222233445678899999999999999877
Q ss_pred CceEE
Q 039397 261 DTYVK 265 (349)
Q Consensus 261 ~~~i~ 265 (349)
..+++
T Consensus 240 ~~~it 244 (261)
T 3n74_A 240 ASMIT 244 (261)
T ss_dssp GTTCC
T ss_pred ccCcC
Confidence 66554
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=296.61 Aligned_cols=214 Identities=18% Similarity=0.112 Sum_probs=180.9
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-------hhhHHHHhcCCCCeEEEEEec----------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-------LQGSTIDEYNPINEVTLVSLN---------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-------l~~~~~~~~~~~~~~~~~~~d---------- 104 (349)
.+++++|+++||||++|||+++|++|+++|++|++++|+.++ +++...++...+.++..+.+|
T Consensus 4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 83 (285)
T 3sc4_A 4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA 83 (285)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 457899999999999999999999999999999999999874 444455554445678889998
Q ss_pred ----cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCC-CC
Q 039397 105 ----NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPL-PR 178 (349)
Q Consensus 105 ----~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~-~~ 178 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+. ++
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~ 162 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEV-PLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR 162 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTS-CHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC
Confidence 3456899999999999988888876 5689999999999999999999999998654 899999999999886 78
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecC-cccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDE-VGITIATHG-WIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
...|++||+|+++|+++++.|++++ |+||+|+|| .++|++.+..... ..+..+..+|||+|++++++
T Consensus 163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~-----------~~~~~r~~~pedvA~~~~~l 231 (285)
T 3sc4_A 163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG-----------DEAMARSRKPEVYADAAYVV 231 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS-----------CCCCTTCBCTHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc-----------cccccCCCCHHHHHHHHHHH
Confidence 8999999999999999999999988 999999999 6899876432111 12345788999999999999
Q ss_pred HhcCCceEEcCc
Q 039397 257 ACRGDTYVKFPS 268 (349)
Q Consensus 257 ~~~~~~~i~~p~ 268 (349)
+++.. +++...
T Consensus 232 ~s~~~-~~tG~~ 242 (285)
T 3sc4_A 232 LNKPS-SYTGNT 242 (285)
T ss_dssp HTSCT-TCCSCE
T ss_pred hCCcc-cccceE
Confidence 99987 665443
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-40 Score=297.35 Aligned_cols=218 Identities=19% Similarity=0.167 Sum_probs=176.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC---cchhhhHHHHhcCCCCeEEEEEec--------------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR---ENRLQGSTIDEYNPINEVTLVSLN-------------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~---~~~l~~~~~~~~~~~~~~~~~~~d-------------- 104 (349)
.++++||++|||||++|||+++|++|+++|++|++++|+ .++++++..++...+.++..+.+|
T Consensus 6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 357899999999999999999999999999999998775 345666666776556788899999
Q ss_pred cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHH
Q 039397 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+| +++|+||++||.++..+.++.+.|++
T Consensus 86 ~~~~g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~m-~~~g~iv~isS~~~~~~~~~~~~Y~a 163 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGKVLKKPIVET-SEAEFDAMDTINNKVAYFFIKQAAKHM-NPNGHIITIATSLLAAYTGFYSTYAG 163 (262)
T ss_dssp HHHHCSEEEEEECCCCCCSSCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHTTE-EEEEEEEEECCCHHHHHHCCCCC---
T ss_pred HHHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHhh-cCCCEEEEEechhhccCCCCCchhHH
Confidence 3456899999999999888888876 569999999999999999999999999 45689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++........ .........+.++..+|||+|+++++++++ ..+
T Consensus 164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~ 239 (262)
T 3ksu_A 164 NKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE---STAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWW 239 (262)
T ss_dssp --CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------CCCCSCCGGGTHHHHHHHHTT-TTT
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH---HHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCC
Confidence 9999999999999999988 99999999999999875432111 112223344567889999999999999998 666
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 240 it 241 (262)
T 3ksu_A 240 IN 241 (262)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=288.75 Aligned_cols=217 Identities=22% Similarity=0.232 Sum_probs=181.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+|++|+++||||++|||+++|++|+++|++|++++| +++++++..+++...+.++..+.+| .+.+
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999999999999999 7777777766664334567888888 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 159 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRM-KEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKA 159 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHH
Confidence 799999999999877777776 4689999999999999999999999997654 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++++++++.|++++ |+||+|+||+++|++..... +. .........+..+..+|||+|+++++++++...+++
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~-~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~t 234 (246)
T 2uvd_A 160 GVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD---EN-IKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYIT 234 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC---TT-HHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC---HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCC
Confidence 9999999999999988 99999999999999876421 11 111111223456788999999999999987655543
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=294.14 Aligned_cols=219 Identities=14% Similarity=0.120 Sum_probs=181.0
Q ss_pred CCCCCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 42 SENMEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
+++++||++|||||+| |||+++|++|+++|++|++++|+++..+......... ..+..+.+| .
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHH
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHH
Confidence 3578999999999996 9999999999999999999999976544433322211 235678888 3
Q ss_pred ccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchh
Q 039397 106 KESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~ 181 (349)
+++|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...
T Consensus 104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~g~IV~isS~~~~~~~~~~~~ 181 (296)
T 3k31_A 104 EEWGSLDFVVHAVAFSDKNELKGRYVDT-SLGNFLTSMHISCYSFTYIASKAEPLMTN-GGSILTLSYYGAEKVVPHYNV 181 (296)
T ss_dssp HHHSCCSEEEECCCCCCHHHHTSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHGGGCTT-CEEEEEEECGGGTSCCTTTTH
T ss_pred HHcCCCCEEEECCCcCCcccccCChhhC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCEEEEEEehhhccCCCCchh
Confidence 456899999999999865 566665 56899999999999999999999999976 789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++||+|+++|+++++.|++++ |+||+|+||+++|++....... ...........+.++..+|||+|+++++++++.
T Consensus 182 Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~ 259 (296)
T 3k31_A 182 MGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF--HYILTWNKYNSPLRRNTTLDDVGGAALYLLSDL 259 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH--HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence 9999999999999999999998 9999999999999987653211 111222334456778999999999999999987
Q ss_pred CceEE
Q 039397 261 DTYVK 265 (349)
Q Consensus 261 ~~~i~ 265 (349)
.++++
T Consensus 260 a~~it 264 (296)
T 3k31_A 260 GRGTT 264 (296)
T ss_dssp GTTCC
T ss_pred cCCcc
Confidence 66554
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=289.05 Aligned_cols=218 Identities=18% Similarity=0.218 Sum_probs=170.8
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
|+.+|++|+++||||++|||+++|++|+++|++|++++|++ +++++. +...+.++..+.+| .
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (249)
T 2ew8_A 1 MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAA---IRNLGRRVLTVKCDVSQPGDVEAFGKQVI 77 (249)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHH---HHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHH---HHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999999998 665542 21223467788888 2
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 156 (249)
T 2ew8_A 78 STFGRCDILVNNAGIYPLIPFDEL-TFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIS 156 (249)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHH
Confidence 346899999999999877777776 568999999999999999999999999765 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCC-CccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTK-GKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
||+|+++++++++.|++++ |+||+|+||+++|++.. ............+ ..+.++..+|||+|+++++++++..+
T Consensus 157 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~dva~~~~~l~s~~~~ 233 (249)
T 2ew8_A 157 TKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNM---LQAIPRLQVPLDLTGAAAFLASDDAS 233 (249)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CT---TSSSCSCCCTHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHh---hCccCCCCCHHHHHHHHHHHcCcccC
Confidence 9999999999999999988 99999999999999875 3210100000000 03456788999999999999987655
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 234 ~~t 236 (249)
T 2ew8_A 234 FIT 236 (249)
T ss_dssp TCC
T ss_pred CCC
Confidence 543
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=299.17 Aligned_cols=223 Identities=18% Similarity=0.173 Sum_probs=180.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC------------cchhhhHHHHhcCCCCeEEEEEec------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR------------ENRLQGSTIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~------------~~~l~~~~~~~~~~~~~~~~~~~d------ 104 (349)
.+++||++|||||++|||+++|++|+++|++|++++|+ .+++++....+...+..+..+.+|
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS 121 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 46899999999999999999999999999999999986 445555555554445678888998
Q ss_pred --------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEecccccc
Q 039397 105 --------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWL 174 (349)
Q Consensus 105 --------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~ 174 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ +|+||++||.++..
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~ 200 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSL-TDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR 200 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence 3456899999999999888888776 468999999999999999999999999765 48999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcc------c--cccchh--hhhH-HHHhhhcC
Q 039397 175 PLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKF------M--LEDGAE--MQWK-EEREVHVA 242 (349)
Q Consensus 175 ~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~------~--~~~~~~--~~~~-~~~~~~~~ 242 (349)
+.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++..... . ...... .... .......+
T Consensus 201 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 280 (317)
T 3oec_A 201 GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIP 280 (317)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSS
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCC
Confidence 99999999999999999999999999988 99999999999999864210 0 000000 0000 00011146
Q ss_pred CCCHHHHHHHHHHHHhcCCceEEc
Q 039397 243 GGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 243 ~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
..+|||+|+++++++++..++++.
T Consensus 281 ~~~pedvA~av~fL~s~~a~~itG 304 (317)
T 3oec_A 281 WVEPEDVSNAVAWLASDEARYIHG 304 (317)
T ss_dssp SBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred CCCHHHHHHHHHHHcCCcccCCCC
Confidence 779999999999999988776653
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=293.02 Aligned_cols=222 Identities=23% Similarity=0.232 Sum_probs=180.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~ 106 (349)
.++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.. .+.++..+.+| .+
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999888777666532 14467888888 23
Q ss_pred cCCCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.+|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 167 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESF-TAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA 167 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHH
Confidence 46799999999998766 666665 468999999999999999999999999765 499999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc-ccchhhh---hHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML-EDGAEMQ---WKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
||+|+++++++++.|++++ |+||+|+||+++|++....... .+..... ......+.++..+|||+|+++++++++
T Consensus 168 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~ 247 (267)
T 1iy8_A 168 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSD 247 (267)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999999999988 9999999999999986431000 0110000 111123456788999999999999987
Q ss_pred CCceEE
Q 039397 260 GDTYVK 265 (349)
Q Consensus 260 ~~~~i~ 265 (349)
...+++
T Consensus 248 ~~~~~t 253 (267)
T 1iy8_A 248 DASYVN 253 (267)
T ss_dssp GGTTCC
T ss_pred cccCCC
Confidence 655543
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=283.66 Aligned_cols=210 Identities=21% Similarity=0.220 Sum_probs=176.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|++|+++||||++|||++++++|+++|++|++++|+++++++...++ + +..+.+| .+++|
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLG 76 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999999988877665543 1 5667777 34468
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.+ ..+.++...|++||+|
T Consensus 77 ~id~lvn~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a 154 (245)
T 1uls_A 77 RLDGVVHYAGITRDNFHWKM-PLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAG 154 (245)
T ss_dssp SCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHH
Confidence 89999999999877777776 4689999999999999999999999997654 8999999999 8888999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+++|+++++.|++++ |+||+|+||+++|++..... +. .........+.++..+|||+|+.+++++++...++
T Consensus 155 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~-~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~ 227 (245)
T 1uls_A 155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---EK-VREKAIAATPLGRAGKPLEVAYAALFLLSDESSFI 227 (245)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---HH-HHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC---HH-HHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence 999999999999988 99999999999999876421 11 11111122345678899999999999998765544
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-39 Score=288.54 Aligned_cols=221 Identities=21% Similarity=0.233 Sum_probs=182.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~ 108 (349)
++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++...+.++..+.+|. +.+
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 468899999999999999999999999999999999999888877766644455788888882 234
Q ss_pred -CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 109 -KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 -g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||
T Consensus 85 ~g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (260)
T 2ae2_A 85 HGKLNILVNNAGIVIYKEAKDY-TVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 163 (260)
T ss_dssp TTCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHH
Confidence 899999999999877777776 4689999999999999999999999997654 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh-hhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE-MQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+|+++++++++.|++++ |+||+|+||+++|++............ ........+.++..+|||+|+++++++++...++
T Consensus 164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~ 243 (260)
T 2ae2_A 164 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 243 (260)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCC
Confidence 99999999999999987 999999999999998643211110000 0011122355678899999999999998765443
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-39 Score=291.02 Aligned_cols=223 Identities=24% Similarity=0.224 Sum_probs=182.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC-CCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP-INEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~-~~~~~~~~~d--------------~ 105 (349)
|.+++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++... +.++..+.+| .
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR 80 (263)
T ss_dssp CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999988887776665322 3467788888 2
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 159 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGSNETIMEA-ADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNV 159 (263)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHH
Confidence 345799999999999877777776 468999999999999999999999999755 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc----c---cchhhhhHHHH-hhhcCCCCHHHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML----E---DGAEMQWKEER-EVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~----~---~~~~~~~~~~~-~~~~~~~~~edvA~~i~~ 255 (349)
||+|+++++++++.|++++ |+||+|+||+++|++....... . ........... .+.++..+|||+|+++++
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~ 239 (263)
T 3ai3_A 160 TKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVF 239 (263)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999988 9999999999999975432110 0 00000111112 355678999999999999
Q ss_pred HHhcCCceE
Q 039397 256 GACRGDTYV 264 (349)
Q Consensus 256 l~~~~~~~i 264 (349)
++++...++
T Consensus 240 l~s~~~~~~ 248 (263)
T 3ai3_A 240 LCSERATYS 248 (263)
T ss_dssp HTSTTCTTC
T ss_pred HcCccccCC
Confidence 998765554
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=286.01 Aligned_cols=210 Identities=20% Similarity=0.216 Sum_probs=174.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|++|||||++|||+++|++|+++|++|++++|+.+++++...++...+..+..+.+| .+.+
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 46889999999999999999999999999999999999999888887775556678888998 3446
Q ss_pred CCcceeeecCcC-CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASL-GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|+||||||+ ...+++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 183 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTM-KPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASK 183 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHH
T ss_pred CCCCEEEECCCccCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHH
Confidence 899999999998 445566665 568999999999999999999999999765 49999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++++.|++++ |+|++|+||+++|++...... ..+..+..+|||+|+++++++++....++
T Consensus 184 aa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------------~~~~~~~~~p~dvA~~v~~l~s~~~~~~~ 251 (262)
T 3rkr_A 184 WGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA------------KKSALGAIEPDDIADVVALLATQADQSFI 251 (262)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------CCCHHHHHHHHHHHHTCCTTCCE
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc------------ccccccCCCHHHHHHHHHHHhcCcccccc
Confidence 99999999999999988 999999999999998764321 11234678999999999999998776543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=295.04 Aligned_cols=220 Identities=19% Similarity=0.264 Sum_probs=180.4
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc--chhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE--NRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~--~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
+.+++||++|||||++|||+++|++|+++|++|++++|+. +..+++.+.+...+.++..+.+| .
T Consensus 44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999973 34455555444445678888888 3
Q ss_pred ccCCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHH
Q 039397 106 KESKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
+++|++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...|++
T Consensus 124 ~~~g~iD~lv~nAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~Y~a 201 (294)
T 3r3s_A 124 EALGGLDILALVAGKQTAIPEIKDL-TSEQFQQTFAVNVFALFWITQEAIPLLPK-GASIITTSSIQAYQPSPHLLDYAA 201 (294)
T ss_dssp HHHTCCCEEEECCCCCCCCSSGGGC-CHHHHHHHHHHHTHHHHHHHHHHGGGCCT-TCEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHcCCCCEEEECCCCcCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHhhc-CCEEEEECChhhccCCCCchHHHH
Confidence 44689999999999865 4556665 56899999999999999999999999965 589999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++........+ .........+.++..+|||+|+++++++++..++
T Consensus 202 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~ 279 (294)
T 3r3s_A 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQD--KIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY 279 (294)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGG--GSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHH--HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 9999999999999999988 999999999999998432111111 1111223346678899999999999999988776
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 280 it 281 (294)
T 3r3s_A 280 VT 281 (294)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-39 Score=288.48 Aligned_cols=219 Identities=21% Similarity=0.272 Sum_probs=175.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCC-CCeEEEEEec--------------cccC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNP-INEVTLVSLN--------------NKES 108 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~-~~~~~~~~~d--------------~~~~ 108 (349)
|++|+++||||++|||+++|++|+++|++|++++|+.++ ++++.+++... +..+..+.+| .+++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 678999999999999999999999999999999999887 77766655321 3457778888 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||+
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDF-PTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence 799999999999877777776 4689999999999999999999999997654 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc--------cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE--------DGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
|+++|+++++.|++++ |+||+|+||+++|++........ +.....+.....+.++..+|||+|++++++++
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s 240 (260)
T 1x1t_A 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999988 99999999999999876432110 00000110122355678999999999999998
Q ss_pred cCCceE
Q 039397 259 RGDTYV 264 (349)
Q Consensus 259 ~~~~~i 264 (349)
+...++
T Consensus 241 ~~~~~~ 246 (260)
T 1x1t_A 241 DAAAQI 246 (260)
T ss_dssp GGGTTC
T ss_pred hhhcCC
Confidence 765544
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-39 Score=290.15 Aligned_cols=222 Identities=21% Similarity=0.308 Sum_probs=181.7
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d--------------~ 105 (349)
...++++|+++||||++|||+++|++|+++|++|++++|+.+++++...++ ...+..+..+.+| .
T Consensus 15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999988887766655 2223467778888 2
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccc-cccCCCCchhhH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVE-NWLPLPRMSLYA 183 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~-~~~~~~~~~~Y~ 183 (349)
+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.+ +..+.++...|+
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~ 173 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEF-PLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYA 173 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHH
Confidence 346799999999999877777776 5689999999999999999999999997654 8999999999 888899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++|+++++.|++++ |+||+|+||+++|++...... ............+.++..+|||+|+++++++++...
T Consensus 174 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~ 251 (267)
T 1vl8_A 174 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS--DPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAK 251 (267)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc--ChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 99999999999999999988 999999999999998653211 010111111223456788999999999999987655
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 252 ~it 254 (267)
T 1vl8_A 252 YVT 254 (267)
T ss_dssp TCC
T ss_pred CCc
Confidence 543
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-39 Score=294.14 Aligned_cols=218 Identities=20% Similarity=0.208 Sum_probs=180.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchh-hhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL-QGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l-~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.+++||++|||||++|||+++|++|+++|++|++++|+.++. +...+.+...+.++..+.+| .++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999997653 33444445555678888998 345
Q ss_pred CCCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+... ..+.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...|++||
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 200 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYI-TAEQLEKTFRINIFSYFHVTKAALSHLKQ-GDVIINTASIVAYEGNETLIDYSATK 200 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGC-CHHHHHHHHHHHTHHHHHHHHHHHTTCCT-TCEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred cCCCCEEEECCCCcCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhh-CCEEEEEechHhcCCCCCChhHHHHH
Confidence 6899999999998754 455554 56899999999999999999999999964 68999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++++.|++++ |+||+|+||+++|++...... ...........+.++..+|||+|+++++++++...+++
T Consensus 201 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~it 277 (291)
T 3ijr_A 201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD---EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVT 277 (291)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC---HHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC---HHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCc
Confidence 99999999999999988 999999999999998643221 11111112234567888999999999999998776654
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=285.18 Aligned_cols=214 Identities=24% Similarity=0.199 Sum_probs=176.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
||+++||||++|||+++|++|+++| ++|++++|++++++++.+++ +..+..+.+| .+.+|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 6899999999999999999999985 79999999998888777665 3467888888 345689
Q ss_pred cceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 111 VDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 111 iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|++++|+||++||.++..+.++...|++||+|+
T Consensus 79 id~lvnnAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 157 (254)
T 3kzv_A 79 IDSLVANAGVLEPVQNVNEI-DVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAAL 157 (254)
T ss_dssp CCEEEEECCCCCCCTTTTSC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHHHH
T ss_pred ccEEEECCcccCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHHHH
Confidence 9999999998654 666665 56899999999999999999999999988779999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc-----cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC-ce
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE-----DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD-TY 263 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~-~~ 263 (349)
++|+++++.|+ ..|+||+|+||+++|++........ ............+.++..+|||+|+++++++++.. .+
T Consensus 158 ~~~~~~la~e~-~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~ 236 (254)
T 3kzv_A 158 NHFAMTLANEE-RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDG 236 (254)
T ss_dssp HHHHHHHHHHC-TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHhhc-cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCC
Confidence 99999999998 3499999999999999987643321 11112222344567789999999999999999884 66
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 237 it 238 (254)
T 3kzv_A 237 VN 238 (254)
T ss_dssp GT
T ss_pred CC
Confidence 54
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-39 Score=287.95 Aligned_cols=218 Identities=19% Similarity=0.204 Sum_probs=180.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch--hhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR--LQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~--l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
+|+++||||++|||+++|++|+++|++|++++|+.++ +++..+++...+.++..+.+| .+.+|+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 7899999999999999999999999999999999887 777766665445578888888 234679
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-C-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-N-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
+|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ . |+||++||.++..+.++...|++||+|
T Consensus 82 iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEV-TEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFA 160 (258)
T ss_dssp CCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhC-CHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHH
Confidence 9999999999877777776 468999999999999999999999999754 3 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc-----cc--chhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML-----ED--GAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+++|+++++.|++++ |+||+|+||+++|++....... .. ...........+.++..+|||+|+++++++++.
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~ 240 (258)
T 3a28_C 161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN 240 (258)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcc
Confidence 999999999999988 9999999999999986431100 00 100111112235567899999999999999887
Q ss_pred CceEE
Q 039397 261 DTYVK 265 (349)
Q Consensus 261 ~~~i~ 265 (349)
.++++
T Consensus 241 ~~~~t 245 (258)
T 3a28_C 241 SNYVT 245 (258)
T ss_dssp GTTCC
T ss_pred cCCCC
Confidence 65553
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-39 Score=290.47 Aligned_cols=219 Identities=18% Similarity=0.153 Sum_probs=179.5
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
.++++||+++||||++|||+++|++|+++|++|++++|+. +..++..+.+...+.++..+.+| .+
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999954 44455555554445678888888 23
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.+|++|+||||||+.....+.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++...|++|
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 182 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKM-KTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSAS 182 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred hcCCCCEEEECCCcCCCcccccC-CHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHH
Confidence 45799999999999888877776 5689999999999999999999999997655 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++++++++.|++++ |+||+|+||+++|++........ ........+..+..+|||+|+++++++++...++
T Consensus 183 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~i 258 (271)
T 4iin_A 183 KGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDEL----KADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYI 258 (271)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHH----HHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCC
Confidence 999999999999999988 99999999999999976542111 1111223456688899999999999999876555
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 259 t 259 (271)
T 4iin_A 259 T 259 (271)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=291.22 Aligned_cols=219 Identities=15% Similarity=0.108 Sum_probs=175.3
Q ss_pred CCCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 42 SENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 42 ~~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
+.+++||+++||||+ +|||+++|++|+++|++|++++|+++..+...+.... ...+..+.+| .
T Consensus 26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE-LGAFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH-HTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-cCCceEEECCCCCHHHHHHHHHHHH
Confidence 346899999999999 5699999999999999999999996433332222211 1357788888 3
Q ss_pred ccCCCcceeeecCcCCC----CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchh
Q 039397 106 KESKAVDHLVNTASLGH----TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~ 181 (349)
+++|++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~Iv~isS~~~~~~~~~~~~ 182 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDT-SEANFTNTMLISVYSLTAVSRRAEKLMAD-GGSILTLTYYGAEKVMPNYNV 182 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHTTT-CEEEEEEECGGGTSBCTTTTH
T ss_pred HhcCCCCEEEECCccCCccccccccccc-CHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEeehhhccCCCchHH
Confidence 55789999999999986 4566665 56899999999999999999999999975 789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++||+|+++|+++++.|++++ |+||+|+||+++|++....... ...........+.++..+|||+|+++++++++.
T Consensus 183 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 260 (293)
T 3grk_A 183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDF--RYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDL 260 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCH--HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccch--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 9999999999999999999988 9999999999999987653211 112223344556778999999999999999987
Q ss_pred CceEE
Q 039397 261 DTYVK 265 (349)
Q Consensus 261 ~~~i~ 265 (349)
..+++
T Consensus 261 ~~~it 265 (293)
T 3grk_A 261 SRSVT 265 (293)
T ss_dssp GTTCC
T ss_pred ccCCc
Confidence 66554
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=292.85 Aligned_cols=226 Identities=18% Similarity=0.210 Sum_probs=179.6
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCC--CeEEEEEec--------------c
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI--NEVTLVSLN--------------N 105 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~--~~~~~~~~d--------------~ 105 (349)
+++++||+||||||+||||+++|++|+++|++|++++|+.+++++...++...+ ..+..+.+| .
T Consensus 3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999888777663222 378888888 3
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-------CCeEEEEeccccccCCCC
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-------NGRVVVNASVENWLPLPR 178 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------~g~IV~isS~~~~~~~~~ 178 (349)
+.+|++|+||||||+...+++.+. +.++|++++++|+.|+++++++++|.|+++ +|+||++||.++..+.++
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~ 161 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNLFQPIEES-SYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS 161 (319)
T ss_dssp HHTCCEEEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred HhCCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence 456899999999999888888886 568999999999999999999999999754 699999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhh--------hHHHHhhhcCCCCHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQ--------WKEEREVHVAGGPVEDF 249 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~edv 249 (349)
...|++||+|+++|+++++.|++++ |+|++|+||+|+|++.............. ............+||++
T Consensus 162 ~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~v 241 (319)
T 3ioy_A 162 PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI 241 (319)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHH
Confidence 9999999999999999999999987 99999999999999976432111100000 00001111123799999
Q ss_pred HHHHHHHHhcCCceEEcCc
Q 039397 250 ARLIVSGACRGDTYVKFPS 268 (349)
Q Consensus 250 A~~i~~l~~~~~~~i~~p~ 268 (349)
|+.++.++++++.++...+
T Consensus 242 A~~~~~al~~~~~~i~~~~ 260 (319)
T 3ioy_A 242 GARVIEAMKANRLHIFSHP 260 (319)
T ss_dssp HHHHHHHHHTTCSEECCCS
T ss_pred HHHHHHHHHcCCCEEEcCH
Confidence 9999999999988876543
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=289.59 Aligned_cols=217 Identities=21% Similarity=0.219 Sum_probs=181.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...+ ++..+.+| .+.+
T Consensus 25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999999999988887777774433 67777888 2446
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-----CeEEEEeccccccCCCCch-hh
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-----GRVVVNASVENWLPLPRMS-LY 182 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----g~IV~isS~~~~~~~~~~~-~Y 182 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++.. .|
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y 182 (276)
T 2b4q_A 104 ARLDILVNNAGTSWGAALESY-PVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAY 182 (276)
T ss_dssp SCCSEEEECCCCCCCCCTTSC-CSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTH
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCcccc
Confidence 899999999999877777776 4589999999999999999999999996543 8999999999999988888 99
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHH--HhhhcCCCCHHHHHHHHHHHHhc
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE--REVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
++||+|+++|+++++.|++++ |+||+|+||+++|++....... ....... ..+.++..+|||+|+++++++++
T Consensus 183 ~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 258 (276)
T 2b4q_A 183 GPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND----PQALEADSASIPMGRWGRPEEMAALAISLAGT 258 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC----HHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh----HHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCc
Confidence 999999999999999999987 9999999999999986532110 0011111 33556789999999999999987
Q ss_pred CCceEE
Q 039397 260 GDTYVK 265 (349)
Q Consensus 260 ~~~~i~ 265 (349)
...+++
T Consensus 259 ~~~~~t 264 (276)
T 2b4q_A 259 AGAYMT 264 (276)
T ss_dssp GGTTCC
T ss_pred cccCCC
Confidence 655543
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=283.68 Aligned_cols=220 Identities=15% Similarity=0.123 Sum_probs=180.8
Q ss_pred CCCCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEec-------------
Q 039397 41 YSENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLN------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d------------- 104 (349)
|+++++||+++||||+ +|||+++|++|+++|++|++++|+++..+...+.... ...++..+.+|
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence 5568999999999999 6799999999999999999999997554444433322 22367888888
Q ss_pred -cccCCCcceeeecCcCCC----CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCc
Q 039397 105 -NKESKAVDHLVNTASLGH----TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~ 179 (349)
.+.+|++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++.
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~ 158 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNT-NRDGFLLAHNISSYSLTAVVKAARPMMTE-GGSIVTLTYLGGELVMPNY 158 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHGGGCTT-CEEEEEEECGGGTSCCTTT
T ss_pred HHHHhCCeeEEEEccccccccccccchhhc-cHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CceEEEEecccccccCCCc
Confidence 344579999999999976 3555665 56899999999999999999999999964 6899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
..|++||+|+++|+++++.|++++ |+||+|+||+++|++....... ...........+..+..+|||+|++++++++
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s 236 (266)
T 3oig_A 159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDF--NSILKDIEERAPLRRTTTPEEVGDTAAFLFS 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH--HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccch--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 999999999999999999999988 9999999999999987754221 1112222334456788999999999999999
Q ss_pred cCCceE
Q 039397 259 RGDTYV 264 (349)
Q Consensus 259 ~~~~~i 264 (349)
+...++
T Consensus 237 ~~~~~~ 242 (266)
T 3oig_A 237 DMSRGI 242 (266)
T ss_dssp GGGTTC
T ss_pred CchhcC
Confidence 865544
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=290.99 Aligned_cols=214 Identities=21% Similarity=0.262 Sum_probs=175.1
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
...+++||++|||||++|||+++|++|+++|++|++++|+++.... ....+.+| .+
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN----------VSDHFKIDVTNEEEVKEAVEKTTK 77 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT----------SSEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC----------ceeEEEecCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999998765421 23455666 34
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++|
T Consensus 78 ~~g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 156 (269)
T 3vtz_A 78 KYGRIDILVNNAGIEQYSPLHLT-PTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTS 156 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHH
Confidence 56899999999999888888776 568999999999999999999999999764 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc----c---chhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 186 KAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE----D---GAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
|+|+++|+++++.|+++.|+||+|+||+++|++........ . ...........+.++..+|||+|++++++++
T Consensus 157 Kaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s 236 (269)
T 3vtz_A 157 KHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLAS 236 (269)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999987799999999999999864321100 0 0011112234566788999999999999999
Q ss_pred cCCceEE
Q 039397 259 RGDTYVK 265 (349)
Q Consensus 259 ~~~~~i~ 265 (349)
+...+++
T Consensus 237 ~~~~~it 243 (269)
T 3vtz_A 237 DRSSFIT 243 (269)
T ss_dssp GGGTTCC
T ss_pred CccCCCc
Confidence 8766553
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=285.72 Aligned_cols=212 Identities=21% Similarity=0.217 Sum_probs=177.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEec----------------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLN---------------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d---------------- 104 (349)
+++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++. ........+.+|
T Consensus 9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV 88 (247)
T ss_dssp TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999888877763 222344555554
Q ss_pred cccCCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhh
Q 039397 105 NKESKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y 182 (349)
.+.+|++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||..+..+.++...|
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y 167 (247)
T 3i1j_A 89 EHEFGRLDGLLHNASIIGPRTPLEQL-PDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAY 167 (247)
T ss_dssp HHHHSCCSEEEECCCCCCCCSCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHH
T ss_pred HHhCCCCCEEEECCccCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchh
Confidence 234579999999999864 4556665 5689999999999999999999999997654 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 183 ASAKAALVTFYESLRFELND-E-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++||+|+++|+++++.|+++ + |+||+|+||+++|++........ ...+..+|||+|+.+++++++.
T Consensus 168 ~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~------------~~~~~~~p~dva~~~~~l~s~~ 235 (247)
T 3i1j_A 168 GVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE------------NPLNNPAPEDIMPVYLYLMGPD 235 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS------------CGGGSCCGGGGTHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc------------CccCCCCHHHHHHHHHHHhCch
Confidence 99999999999999999976 5 99999999999999865422111 1125678999999999999988
Q ss_pred CceEEc
Q 039397 261 DTYVKF 266 (349)
Q Consensus 261 ~~~i~~ 266 (349)
..+++.
T Consensus 236 ~~~itG 241 (247)
T 3i1j_A 236 STGING 241 (247)
T ss_dssp GTTCCS
T ss_pred hccccC
Confidence 777653
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=287.22 Aligned_cols=223 Identities=18% Similarity=0.174 Sum_probs=179.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC--CCeEEEEEec--------------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTLVSLN-------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d-------------- 104 (349)
|.+++++|+++||||++|||++++++|+++|++|++++|+++++++..+++... +.++..+.+|
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 1 MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA 80 (260)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999998887776665321 2267788888
Q ss_pred cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhH
Q 039397 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
.+.+| +|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||..+..+.++...|+
T Consensus 81 ~~~~g-id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 158 (260)
T 2z1n_A 81 RDLGG-ADILVYSTGGPRPGRFMEL-GVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSN 158 (260)
T ss_dssp HHTTC-CSEEEECCCCCCCBCGGGC-CHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred HHhcC-CCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhH
Confidence 23446 9999999998877777776 4689999999999999999999999997654 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc------ccchh-hhhHHHHhhhcCCCCHHHHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML------EDGAE-MQWKEEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~edvA~~i~~ 255 (349)
+||+|+++++++++.|++++ |+||+|+||+++|++....... ..... ........+.++..+|||+|+++++
T Consensus 159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~ 238 (260)
T 2z1n_A 159 IMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAF 238 (260)
T ss_dssp HHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence 99999999999999999988 9999999999999987621100 00000 0111112345678899999999999
Q ss_pred HHhcCCceEE
Q 039397 256 GACRGDTYVK 265 (349)
Q Consensus 256 l~~~~~~~i~ 265 (349)
++++..++++
T Consensus 239 l~s~~~~~~t 248 (260)
T 2z1n_A 239 LASEKASFIT 248 (260)
T ss_dssp HTSGGGTTCC
T ss_pred HhCccccCCC
Confidence 9987655543
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=288.87 Aligned_cols=217 Identities=15% Similarity=0.091 Sum_probs=177.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHHhc-CCCCeEEEEEeccccC------------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRENRLQGSTIDEY-NPINEVTLVSLNNKES------------ 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~------------ 108 (349)
.+|++|+++||||++|||+++|++|+++|++|++++ |+.++++++.+++. ..+..+..+.+|....
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence 368899999999999999999999999999999999 99888887776663 3345677888884433
Q ss_pred -------------------CCcceeeecCcCCCCccccccCC-------------cchHHHHHHhHhhhhHHHHHHhccc
Q 039397 109 -------------------KAVDHLVNTASLGHTFFFEEVTD-------------TSIFPRLLDINFWGNVYPTFVALPY 156 (349)
Q Consensus 109 -------------------g~iDvlVnnAg~~~~~~~~~~~~-------------~~~~~~~~~vN~~g~~~l~~~~lp~ 156 (349)
|++|+||||||+....++.+.++ .++|++++++|+.|+++++++++|+
T Consensus 85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 164 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 164 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 48999999999987777766531 5889999999999999999999999
Q ss_pred cccC-------CCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc
Q 039397 157 LHES-------NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG 228 (349)
Q Consensus 157 m~~~-------~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~ 228 (349)
|+++ .|+||++||..+..+.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++ + .. +.
T Consensus 165 m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~--~~ 239 (291)
T 1e7w_A 165 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP--PA 239 (291)
T ss_dssp HHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC--HH
T ss_pred HHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC--HH
Confidence 9765 4899999999999999999999999999999999999999988 999999999999998 4 21 11
Q ss_pred hhhhhHHHHhhhc-CCCCHHHHHHHHHHHHhcCCceEE
Q 039397 229 AEMQWKEEREVHV-AGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
.........+.. +..+|||+|+++++++++...+++
T Consensus 240 -~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~it 276 (291)
T 1e7w_A 240 -VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYIT 276 (291)
T ss_dssp -HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred -HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCcc
Confidence 111111223445 788999999999999997666554
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=284.97 Aligned_cols=219 Identities=23% Similarity=0.228 Sum_probs=180.5
Q ss_pred CCCCCCEEEEeCCC-chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGAS-SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas-~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d--------------~~ 106 (349)
.++++|+++||||+ +|||+++|++|+++|++|++++|+.+++++..+++ .....++..+.+| .+
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 46899999999998 59999999999999999999999999988888777 3334678899999 34
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++...|++
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~ 176 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDM-TDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAA 176 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred HhCCCcEEEECCCcCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHH
Confidence 56899999999999888888776 568999999999999999999999999764 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+|+++|+++++.|++++ |+||+|+||+++|++.+...... .........+.++..+|||+|+++++++++...+
T Consensus 177 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~ 253 (266)
T 3o38_A 177 AKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSE---LLDRLASDEAFGRAAEPWEVAATIAFLASDYSSY 253 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------CCTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHH---HHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccC
Confidence 9999999999999999988 99999999999999976542211 1111223345678899999999999999987665
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 254 ~t 255 (266)
T 3o38_A 254 MT 255 (266)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=289.97 Aligned_cols=220 Identities=19% Similarity=0.237 Sum_probs=176.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC------------cchhhhHHHHhcCCCCeEEEEEec------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR------------ENRLQGSTIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~------------~~~l~~~~~~~~~~~~~~~~~~~d------ 104 (349)
.+++||++|||||++|||+++|++|+++|++|++++|+ .+++++...++...+.++..+.+|
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence 47899999999999999999999999999999999998 455555555554445678889998
Q ss_pred --------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC
Q 039397 105 --------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL 176 (349)
Q Consensus 105 --------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~ 176 (349)
.+++|++|+||||||+.... . +. +.++|++++++|+.|+++++++++|+| +++|+||++||.++..+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~-~-~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~isS~~~~~~~ 161 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLG-A-HL-PVQAFADAFDVDFVGVINTVHAALPYL-TSGASIITTGSVAGLIAA 161 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCC-T-TC-CTHHHHHHHHHHTHHHHHHHHHHGGGC-CTTCEEEEECCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCccc-C-cC-CHHHHHHHhhhhhhhhHHHHHHHHHHh-hcCcEEEEeccchhcccc
Confidence 34568999999999987655 2 23 458999999999999999999999999 456899999999988766
Q ss_pred -----------CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc-----c--ccchhhhhH---
Q 039397 177 -----------PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM-----L--EDGAEMQWK--- 234 (349)
Q Consensus 177 -----------~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~-----~--~~~~~~~~~--- 234 (349)
++...|++||+|+++|+++++.|++++ |+||+|+||+++|++...... . .........
T Consensus 162 ~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (287)
T 3pxx_A 162 AQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF 241 (287)
T ss_dssp HCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHG
T ss_pred cccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhh
Confidence 678899999999999999999999988 999999999999999864210 0 000000000
Q ss_pred -HHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 235 -EEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 235 -~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
.......+..+|||+|+++++++++..++++.
T Consensus 242 ~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG 274 (287)
T 3pxx_A 242 PAMQAMPTPYVEASDISNAVCFLASDESRYVTG 274 (287)
T ss_dssp GGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred hhhcccCCCCCCHHHHHhhHheecchhhcCCCC
Confidence 01111167889999999999999988776653
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=292.23 Aligned_cols=218 Identities=19% Similarity=0.169 Sum_probs=174.9
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC------------cchhhhHHHHhcCCCCeEEEEEec-----
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR------------ENRLQGSTIDEYNPINEVTLVSLN----- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~------------~~~l~~~~~~~~~~~~~~~~~~~d----- 104 (349)
..+++||++|||||++|||+++|++|+++|++|++++|+ .+++++....+...+.++..+.+|
T Consensus 8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 87 (278)
T 3sx2_A 8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE 87 (278)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence 457899999999999999999999999999999999997 455555555554345578888998
Q ss_pred ---------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccc
Q 039397 105 ---------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENW 173 (349)
Q Consensus 105 ---------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~ 173 (349)
.+++|++|+||||||+..... +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++.
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~-----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 162 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGIAPMSA-----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL 162 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCSS-----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCC-----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence 345689999999999875443 247899999999999999999999999764 5899999999998
Q ss_pred cCC----CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhh-h------hHHHHhhhc
Q 039397 174 LPL----PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEM-Q------WKEEREVHV 241 (349)
Q Consensus 174 ~~~----~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~-~------~~~~~~~~~ 241 (349)
.+. ++...|++||+|+++|+++++.|++++ |+||+|+||+++|++............. . ......+ .
T Consensus 163 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 241 (278)
T 3sx2_A 163 AGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V 241 (278)
T ss_dssp SCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred CCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence 877 778899999999999999999999988 9999999999999997642110000000 0 0000112 4
Q ss_pred CCCCHHHHHHHHHHHHhcCCceEE
Q 039397 242 AGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 242 ~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+..+|||+|+++++++++..++++
T Consensus 242 ~~~~p~dvA~~v~~l~s~~~~~it 265 (278)
T 3sx2_A 242 EVLAPEDVANAVAWLVSDQARYIT 265 (278)
T ss_dssp SSBCHHHHHHHHHHHTSGGGTTCC
T ss_pred CcCCHHHHHHHHHHHhCccccccc
Confidence 677999999999999998776654
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=287.17 Aligned_cols=238 Identities=28% Similarity=0.355 Sum_probs=199.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEecc--------------c
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLNN--------------K 106 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d~--------------~ 106 (349)
..+++||+++||||+||||++++++|+++|++|++++|+++++++...++.. +...+..+.+|. +
T Consensus 23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999888877665532 233678888882 3
Q ss_pred cCCCcceeeec-CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNT-ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnn-Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.+|++|+|||| ||.... .+.+. +.+++++++++|+.|+++++++++|.|++++|+||++||.++..+.++...|++|
T Consensus 103 ~~g~iD~li~naag~~~~-~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 180 (286)
T 1xu9_A 103 LMGGLDMLILNHITNTSL-NLFHD-DIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSAS 180 (286)
T ss_dssp HHTSCSEEEECCCCCCCC-CCCCS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred HcCCCCEEEECCccCCCC-ccccC-CHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHH
Confidence 35799999999 566543 34443 4688999999999999999999999998777999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh--cCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 186 KAALVTFYESLRFEL--NDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 186 Kaal~~l~~~la~el--~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
|+++++++++++.|+ ... |+|++++||+++|++...... . .......+|||+|+.++.++.+++.
T Consensus 181 K~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~---~---------~~~~~~~~~~~vA~~i~~~~~~~~~ 248 (286)
T 1xu9_A 181 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS---G---------IVHMQAAPKEECALEIIKGGALRQE 248 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC---G---------GGGGGCBCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcc---c---------cccCCCCCHHHHHHHHHHHHhcCCc
Confidence 999999999999999 455 999999999999998643210 0 0112467999999999999999999
Q ss_pred eEEcCchHHHHHHHHHhchHHHHHHHHHhcc
Q 039397 263 YVKFPSWYDVFLLYRVFAPHVLNWTFRLLIS 293 (349)
Q Consensus 263 ~i~~p~~~~~~~~~~~~~P~~~~~~~~~l~~ 293 (349)
.+.+|++......++.++|.+++|..+++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~ 279 (286)
T 1xu9_A 249 EVYYDSSLWTTLLIRNPSRKILEFLYSTSYN 279 (286)
T ss_dssp EEEECSCHHHHHHSCCHHHHHHHHHHGGGBC
T ss_pred eEEeccHHHHHHHHHHHChHHHHHHHHHHhC
Confidence 9999988888888888999988888776653
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=288.01 Aligned_cols=218 Identities=22% Similarity=0.247 Sum_probs=169.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh---cCCCCeEEEEEec--------------cc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE---YNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~---~~~~~~~~~~~~d--------------~~ 106 (349)
+|++|+++||||++|||++++++|+++|++|++++|+.+++++..+++ ...+.++..+.+| .+
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999998888777666 3334567888888 23
Q ss_pred cCCCcceeeecCcCCCCcccccc---CCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc-ccCCCCchhh
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEV---TDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN-WLPLPRMSLY 182 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~---~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~-~~~~~~~~~Y 182 (349)
.+|++|+||||||+....++.+. .+.++|++++++|+.|+++++++++|+|++++|+||++||.++ ..+.++...|
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y 162 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYY 162 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHH
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCccHH
Confidence 46799999999998776666554 0458899999999999999999999999776799999999999 8899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch--h---hhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA--E---MQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
++||+|+++++++++.|++++ |+||+|+||+++|++........... . ........+.++..+|||+|++++++
T Consensus 163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l 242 (278)
T 1spx_A 163 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 242 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHH
Confidence 999999999999999999987 99999999999999875421111110 0 11111223456788999999999999
Q ss_pred HhcCC
Q 039397 257 ACRGD 261 (349)
Q Consensus 257 ~~~~~ 261 (349)
+++..
T Consensus 243 ~s~~~ 247 (278)
T 1spx_A 243 ADRKT 247 (278)
T ss_dssp HCHHH
T ss_pred cCccc
Confidence 98643
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=284.36 Aligned_cols=205 Identities=12% Similarity=0.063 Sum_probs=162.9
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
.++++++|++|||||++|||+++|++|+++|++|++++|+++++.+...+. .+..+.+| .+
T Consensus 21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-----GAVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999988765443332 25677788 34
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.+|++|+||||||+..... .+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++|
T Consensus 96 ~~g~iD~lv~nAg~~~~~~-~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 173 (260)
T 3gem_A 96 QTSSLRAVVHNASEWLAET-PGE-EADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCAT 173 (260)
T ss_dssp HCSCCSEEEECCCCCCCCC-TTC-HHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHH
T ss_pred hcCCCCEEEECCCccCCCC-CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHH
Confidence 5689999999999876655 333 4588999999999999999999999997665 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 186 KAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
|+|+++|+++++.|++++|+||+|+||+++|++..... .........+..+..+|||+|++++++++
T Consensus 174 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~------~~~~~~~~~p~~r~~~~edva~~v~~L~~ 240 (260)
T 3gem_A 174 KAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAA------YRANALAKSALGIEPGAEVIYQSLRYLLD 240 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------------CCSCCCCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHH------HHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence 99999999999999987899999999999999754210 11111233456678899999999999995
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=287.72 Aligned_cols=220 Identities=21% Similarity=0.197 Sum_probs=182.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...+.++..+.+| .+.+|
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 6889999999999999999999999999999999999988887776664334567888888 24568
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccc--cccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY--LHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~--m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|. |++++ |+||++||.++..+.++...|++||
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 177 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAEL-ADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASK 177 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHH
Confidence 99999999999877777776 46899999999999999999999999 87654 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc-c------chhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE-D------GAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+|+++++++++.|++++ |+||+|+||+++|++........ . ...........+.++..+|||+|++++++++
T Consensus 178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s 257 (277)
T 2rhc_B 178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG 257 (277)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999988 99999999999999864321000 0 0011111222355678999999999999998
Q ss_pred cCCceE
Q 039397 259 RGDTYV 264 (349)
Q Consensus 259 ~~~~~i 264 (349)
+...++
T Consensus 258 ~~~~~~ 263 (277)
T 2rhc_B 258 PGAAAV 263 (277)
T ss_dssp GGGTTC
T ss_pred chhcCC
Confidence 765544
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=290.93 Aligned_cols=211 Identities=18% Similarity=0.184 Sum_probs=173.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++||+++||||++|||+++|++|+++|++|++++|+.+.+++. ....+| .+.+
T Consensus 24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-----------~~~~~Dv~~~~~~~~~~~~~~~~~ 92 (266)
T 3uxy_A 24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-----------LHLPGDLREAAYADGLPGAVAAGL 92 (266)
T ss_dssp --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-----------EECCCCTTSHHHHHHHHHHHHHHH
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-----------hccCcCCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999999999999987765432 111333 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++...|++||+
T Consensus 93 g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 171 (266)
T 3uxy_A 93 GRLDIVVNNAGVISRGRITET-TDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKA 171 (266)
T ss_dssp SCCCEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHH
Confidence 899999999999988888886 568999999999999999999999999764 589999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc---hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG---AEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|+++|+++++.|++++ |+||+|+||+++|++.+........ ..........+.++..+|||+|+++++++++..++
T Consensus 172 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~ 251 (266)
T 3uxy_A 172 ALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARY 251 (266)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 9999999999999988 9999999999999986542211100 01111223345678889999999999999987666
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 252 it 253 (266)
T 3uxy_A 252 LC 253 (266)
T ss_dssp CC
T ss_pred Cc
Confidence 54
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=285.48 Aligned_cols=219 Identities=21% Similarity=0.299 Sum_probs=181.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+|++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+..+..+.+| .+.+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999988877776664334567778888 2345
Q ss_pred CCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.+++.+.++...|++||
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 168 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDA-TEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSK 168 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence 79999999999864 3556665 568999999999999999999999999765 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+|+++|+++++.|++++ |+||+|+||+++|++....... ...........+..+..+|||+|+++++++++...++
T Consensus 169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~ 245 (260)
T 2zat_A 169 TALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD--KARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYI 245 (260)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS--HHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCc
Confidence 99999999999999988 9999999999999986432111 1111111223455678999999999999998765544
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=292.45 Aligned_cols=217 Identities=23% Similarity=0.227 Sum_probs=178.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCC---eEEEEEec--------------c
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN---EVTLVSLN--------------N 105 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~---~~~~~~~d--------------~ 105 (349)
+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+. .+..+.+| .
T Consensus 22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 358899999999999999999999999999999999999888877766633333 67888888 2
Q ss_pred ccCCCcceeeecCcCCCCcc--ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-CCchhh
Q 039397 106 KESKAVDHLVNTASLGHTFF--FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-PRMSLY 182 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-~~~~~Y 182 (349)
+.+|++|+||||||+....+ +.+. +.++|++++++|+.|+++++++++|.|++++|+||++||.++..+. ++...|
T Consensus 102 ~~~g~iD~lvnnAG~~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~Y 180 (297)
T 1xhl_A 102 AKFGKIDILVNNAGANLADGTANTDQ-PVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYY 180 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHH
T ss_pred HhcCCCCEEEECCCcCcCCCCccccC-CHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcchH
Confidence 34679999999999877666 6665 4689999999999999999999999997666999999999999888 899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccccc-c-hhhhhH---HHHhhhcCCCCHHHHHHHHHHH
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLED-G-AEMQWK---EEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~-~-~~~~~~---~~~~~~~~~~~~edvA~~i~~l 256 (349)
++||+|+++++++++.|++++ |+||+|+||+++|++......... . ...... ....+.++..+|||+|++++++
T Consensus 181 ~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l 260 (297)
T 1xhl_A 181 ACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFL 260 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999988 999999999999998653210000 0 000000 1112456788999999999999
Q ss_pred HhcC
Q 039397 257 ACRG 260 (349)
Q Consensus 257 ~~~~ 260 (349)
+++.
T Consensus 261 ~s~~ 264 (297)
T 1xhl_A 261 ADRN 264 (297)
T ss_dssp HCHH
T ss_pred hCCc
Confidence 9865
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=289.11 Aligned_cols=216 Identities=25% Similarity=0.255 Sum_probs=178.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCC---eEEEEEec--------------cc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN---EVTLVSLN--------------NK 106 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~---~~~~~~~d--------------~~ 106 (349)
+|++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+. .+..+.+| .+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999888887777644333 67888888 23
Q ss_pred cCCCcceeeecCcCCCCcc----ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-CCchh
Q 039397 107 ESKAVDHLVNTASLGHTFF----FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-PRMSL 181 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~----~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-~~~~~ 181 (349)
.+|++|+||||||+....+ +.+. +.++|++++++|+.|+++++++++|+|++++|+||++||.++..+. ++...
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~ 161 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQ-GIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY 161 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHH
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCcccH
Confidence 4679999999999877665 5565 5689999999999999999999999997666999999999999888 89999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccccc-c-hhhhhH---HHHhhhcCCCCHHHHHHHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLED-G-AEMQWK---EEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~-~-~~~~~~---~~~~~~~~~~~~edvA~~i~~ 255 (349)
|++||+|+++|+++++.|++++ |+||+|+||+++|++......... . ...... ....+.++..+|||+|+++++
T Consensus 162 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~ 241 (280)
T 1xkq_A 162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF 241 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999988 999999999999998653210000 0 000000 111345678899999999999
Q ss_pred HHhcC
Q 039397 256 GACRG 260 (349)
Q Consensus 256 l~~~~ 260 (349)
++++.
T Consensus 242 l~s~~ 246 (280)
T 1xkq_A 242 LADRN 246 (280)
T ss_dssp HHCHH
T ss_pred hcCcc
Confidence 99865
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=286.47 Aligned_cols=211 Identities=22% Similarity=0.258 Sum_probs=175.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|++|+++||||++|||+++|++|+++|++|++++|+++++++..+++. .++..+.+| .+.+|
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999999988877665543 457778888 34468
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+| +++|+||++||.++. +.++...|++||+|+
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~ 156 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNL-PLEAWEKVLRVNLTGSFLVARKAGEVL-EEGGSLVLTGSVAGL-GAFGLAHYAAGKLGV 156 (263)
T ss_dssp CCCEEEEGGGGTTTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CTTCEEEEECCCTTC-CHHHHHHHHHCSSHH
T ss_pred CCcEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHH-hcCCEEEEEecchhc-CCCCcHHHHHHHHHH
Confidence 99999999999877777776 468999999999999999999999999 557999999999998 888889999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
++++++++.|++++ |+||+|+||+++|++..... +. .........+..+..+|||+|+.+++++++...++
T Consensus 157 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~-~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~ 228 (263)
T 2a4k_A 157 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP---PW-AWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYI 228 (263)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC---HH-HHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC---HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence 99999999999988 99999999999999876421 11 11111222345678899999999999998765443
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=284.43 Aligned_cols=219 Identities=19% Similarity=0.182 Sum_probs=181.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
..+.++|++|||||++|||+++|++|+++|++|++++ |+.++.++...++.....++..+.+| .+
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA 87 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999988 66666666666664445567888888 35
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
.+|++|+||||||+.....+.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++|
T Consensus 88 ~~g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 166 (256)
T 3ezl_A 88 EVGEIDVLVNNAGITRDVVFRKM-TREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTA 166 (256)
T ss_dssp HTCCEEEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHH
Confidence 56899999999999888777776 5689999999999999999999999997654 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+++|+++++.|++++ |+||+++||+++|++.+.... ..........+..+..+|||+|+++++++++...++
T Consensus 167 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~ 242 (256)
T 3ezl_A 167 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP----DVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFS 242 (256)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH----HHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCC
Confidence 999999999999999988 999999999999998765321 122222334566788899999999999998766554
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 243 t 243 (256)
T 3ezl_A 243 T 243 (256)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=279.49 Aligned_cols=218 Identities=23% Similarity=0.296 Sum_probs=182.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEeccc--------------c-
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLNNK--------------E- 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d~~--------------~- 107 (349)
.+++|+++||||++|||+++|++|+++|++|+++ +|+.+++++...++......+..+.+|.. .
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999986 67777777777777555567888888821 1
Q ss_pred -----CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhh
Q 039397 108 -----SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 108 -----~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y 182 (349)
.+++|+||||||+.....+.+. +.++|++++++|+.|+++++++++|+|+ ++|+||++||.++..+.++...|
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y 161 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEET-TEQFFDRMVSVNAKAPFFIIQQALSRLR-DNSRIINISSAATRISLPDFIAY 161 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHTTTEE-EEEEEEEECCGGGTSCCTTBHHH
T ss_pred cccccCCcccEEEECCCCCCCCChhhC-CHHHHHHHHhhhchHHHHHHHHHHHhhC-CCCEEEEeCChhhccCCCCcchh
Confidence 2469999999999877777776 5689999999999999999999999994 46899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++||+|+++|+++++.|++++ |+||+|+||+++|++........ ..........+..+..+|||+|+++++++++..
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 239 (255)
T 3icc_A 162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDP--MMKQYATTISAFNRLGEVEDIADTAAFLASPDS 239 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSH--HHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccH--HHHHhhhccCCcCCCCCHHHHHHHHHHHhCccc
Confidence 999999999999999999988 99999999999999987643221 112222334456788899999999999998876
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
++++
T Consensus 240 ~~~t 243 (255)
T 3icc_A 240 RWVT 243 (255)
T ss_dssp TTCC
T ss_pred CCcc
Confidence 6554
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=285.77 Aligned_cols=213 Identities=20% Similarity=0.248 Sum_probs=177.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|++|+++||||++|||+++|++|+++|++|++++|+++++++..+++ +..+..+.+| .+.+|
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999999988877766554 3457778888 23457
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+|
T Consensus 79 ~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 157 (254)
T 1hdc_A 79 SVDGLVNNAGISTGMFLETE-SVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence 99999999999877777775 568999999999999999999999999765 4899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCC-CHHHHHHHHHHHHhcCCceE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGG-PVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~edvA~~i~~l~~~~~~~i 264 (349)
+++|+++++.|++++ |+||+|+||+++|++...... .. ...+ ....+..+.. +|||+|+.+++++++...++
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~--~~~~-~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~ 231 (254)
T 1hdc_A 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI-RQ--GEGN-YPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC-CC--STTS-CTTSTTSSCB-CHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccch-hH--HHHH-HhcCCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence 999999999999888 999999999999998643210 00 0000 1112345677 99999999999998764443
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=283.37 Aligned_cols=226 Identities=23% Similarity=0.275 Sum_probs=193.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.+++++|+++||||++|||++++++|+++|++|++++|+++++++...++...+.++..+.+| .+.
T Consensus 26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999988887776664444568888888 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++...|++||
T Consensus 106 ~g~iD~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 184 (272)
T 1yb1_A 106 IGDVSILVNNAGVVYTSDLFAT-QDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 184 (272)
T ss_dssp TCCCSEEEECCCCCCCCCCGGG-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred CCCCcEEEECCCcCCCcchhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence 6799999999999877777665 4588999999999999999999999997654 8999999999999888899999999
Q ss_pred HHHHHHHHHHHHHhc---CC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 187 AALVTFYESLRFELN---DE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 187 aal~~l~~~la~el~---~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+|+++++++++.|++ +. |+|++|+||+++|++.... ..+..+..+|||+|+.+++++.+++.
T Consensus 185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~--------------~~~~~~~~~~~dva~~i~~~~~~~~~ 250 (272)
T 1yb1_A 185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--------------STSLGPTLEPEEVVNRLMHGILTEQK 250 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--------------HHHHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc--------------cccccCCCCHHHHHHHHHHHHHcCCC
Confidence 999999999999996 45 9999999999999985420 12235788999999999999999999
Q ss_pred eEEcCchHHHHHHHHHhchH
Q 039397 263 YVKFPSWYDVFLLYRVFAPH 282 (349)
Q Consensus 263 ~i~~p~~~~~~~~~~~~~P~ 282 (349)
.+..|++...+..+.+++|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~P~ 270 (272)
T 1yb1_A 251 MIFIPSSIAFLTTLERILPE 270 (272)
T ss_dssp EEEECCCCCHHHHHHTTC--
T ss_pred EEECCchHHHHHHHHHhCCC
Confidence 99999888888888888884
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=283.48 Aligned_cols=214 Identities=20% Similarity=0.209 Sum_probs=174.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++|++|+++||||++|||++++++|+++|++|++++|++++ ++..+++. . ..+.+| .+.+
T Consensus 2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~ 75 (256)
T 2d1y_A 2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL 75 (256)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999887 65555553 3 567777 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||+
T Consensus 76 g~iD~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 154 (256)
T 2d1y_A 76 GRVDVLVNNAAIAAPGSALTV-RLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG 154 (256)
T ss_dssp SCCCEEEECCCCCCCBCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence 799999999999877777775 4689999999999999999999999997654 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc--cccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM--LEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|+++++++++.|++++ |+||+|+||+++|++...... ..............+.++..+|||+|+++++++++...+
T Consensus 155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~ 233 (256)
T 2d1y_A 155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASF 233 (256)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 9999999999999988 999999999999997543100 000001111112234567889999999999999876443
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=283.90 Aligned_cols=218 Identities=18% Similarity=0.197 Sum_probs=179.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
+|+++||||++|||+++|++|+++|++|++++|++++++++.+++...+.++..+.+| .+.+|++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 6899999999999999999999999999999999988887776664334567888888 24568999
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+|++
T Consensus 82 ~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 160 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESI-TPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 160 (256)
T ss_dssp EEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence 99999999877777776 468999999999999999999999999764 489999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc---c----ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM---L----EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+|+++++.|++++ |+||+|+||+++|++...... . .............+.++..+|||+|+++++++++...
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~ 240 (256)
T 1geg_A 161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 240 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999999988 999999999999998543210 0 0000011111123456788999999999999988655
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 241 ~~t 243 (256)
T 1geg_A 241 YMT 243 (256)
T ss_dssp TCC
T ss_pred CCC
Confidence 543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=278.47 Aligned_cols=216 Identities=22% Similarity=0.254 Sum_probs=167.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKA 110 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~ 110 (349)
...++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++. .....+.+| .++.++
T Consensus 8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (249)
T 3f9i_A 8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKTSN 84 (249)
T ss_dssp -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTCSC
T ss_pred ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhcCC
Confidence 3457899999999999999999999999999999999999998888777663 356777787 345578
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+|++|||||+.....+.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||.++..+.++...|++||+|+
T Consensus 85 id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 163 (249)
T 3f9i_A 85 LDILVCNAGITSDTLAIRM-KDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGL 163 (249)
T ss_dssp CSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHH
Confidence 9999999999887777665 458899999999999999999999999654 48999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
++|+++++.|++++ |+||+++||+++|++...... ..........+..+..+|||+|+++++++++...++
T Consensus 164 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~ 235 (249)
T 3f9i_A 164 IGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE----KQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYI 235 (249)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBC------CCH----HHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCc
Confidence 99999999999988 999999999999998765421 111222334456788999999999999999865544
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=284.66 Aligned_cols=208 Identities=17% Similarity=0.209 Sum_probs=162.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------cccC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------NKES 108 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------~~~~ 108 (349)
++++++|++|||||++|||+++|++|+++|++|++++|+.++.. +++ ...+..+.+| ..++
T Consensus 4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (257)
T 3tl3_A 4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL---GDRARFAAADVTDEAAVASALDLAETM 77 (257)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc---CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999655432 222 3467788888 2236
Q ss_pred CCcceeeecCcCCCCccccc---cCCcchHHHHHHhHhhhhHHHHHHhcccccc---------CCCeEEEEeccccccCC
Q 039397 109 KAVDHLVNTASLGHTFFFEE---VTDTSIFPRLLDINFWGNVYPTFVALPYLHE---------SNGRVVVNASVENWLPL 176 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~---~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---------~~g~IV~isS~~~~~~~ 176 (349)
|++|+||||||+.....+.+ ..+.++|++++++|+.|+++++++++|+|++ ++|+||++||.++..+.
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 157 (257)
T 3tl3_A 78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ 157 (257)
T ss_dssp SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence 89999999999876544322 1256899999999999999999999999976 34899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhh-cCCCCHHHHHHHHH
Q 039397 177 PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVH-VAGGPVEDFARLIV 254 (349)
Q Consensus 177 ~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edvA~~i~ 254 (349)
++...|++||+|+++|+++++.|++++ |+||+|+||+++|++...... . .........+. .+..+|||+|++++
T Consensus 158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~-~~~~~~~~~~~~~r~~~p~dva~~v~ 233 (257)
T 3tl3_A 158 IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPE---E-ARASLGKQVPHPSRLGNPDEYGALAV 233 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CH---H-HHHHHHHTSSSSCSCBCHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccH---H-HHHHHHhcCCCCCCccCHHHHHHHHH
Confidence 999999999999999999999999988 999999999999999865321 1 11111222333 68899999999999
Q ss_pred HHHhc
Q 039397 255 SGACR 259 (349)
Q Consensus 255 ~l~~~ 259 (349)
+++++
T Consensus 234 ~l~s~ 238 (257)
T 3tl3_A 234 HIIEN 238 (257)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 99987
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-38 Score=285.41 Aligned_cols=221 Identities=19% Similarity=0.255 Sum_probs=178.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
++++||+++||||++|||+++|++|+++|++|++++|+.++ .++..+++...+.++..+.+| .+.
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999998754 444445554334567888888 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCC-chhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPR-MSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~-~~~Y~asK 186 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+| +++|+||++||.++..+.+. ...|++||
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~~Y~asK 182 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDV-TPEEFDRVFTINTRGQFFVAREAYKHL-EIGGRLILMGSITGQAKAVPKHAVYSGSK 182 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHS-CTTCEEEEECCGGGTCSSCSSCHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHH-hcCCeEEEEechhhccCCCCCCcchHHHH
Confidence 5899999999999877777776 468999999999999999999999999 45689999999999888764 89999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc---c----cchhhhhHHH--HhhhcCCCCHHHHHHHHHHH
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML---E----DGAEMQWKEE--REVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~---~----~~~~~~~~~~--~~~~~~~~~~edvA~~i~~l 256 (349)
+|+++|+++++.|++++ |+||+|+||+++|++....... . .......... ..+.++..+|||+|++++++
T Consensus 183 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l 262 (283)
T 1g0o_A 183 GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFL 262 (283)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999988 9999999999999986432110 0 0001111111 33556788999999999999
Q ss_pred HhcCCceEE
Q 039397 257 ACRGDTYVK 265 (349)
Q Consensus 257 ~~~~~~~i~ 265 (349)
+++...+++
T Consensus 263 ~s~~~~~it 271 (283)
T 1g0o_A 263 ASNDGGWVT 271 (283)
T ss_dssp HSGGGTTCC
T ss_pred hCccccCcC
Confidence 998766554
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=284.57 Aligned_cols=218 Identities=13% Similarity=0.115 Sum_probs=178.5
Q ss_pred CCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
.++++|+++||||+ +|||+++|++|+++|++|++++|+. .++..+++......+..+.+| .+
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHH
Confidence 46889999999998 7899999999999999999999987 222233332222347788888 34
Q ss_pred cCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhh
Q 039397 107 ESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y 182 (349)
.+|++|+||||||+... .++.+..+.++|++++++|+.|+++++++++|+|++++|+||++||.++..+.++...|
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 179 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTM 179 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHH
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhh
Confidence 56899999999998765 44544235689999999999999999999999998778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++||+|+++|+++++.|++++ |+||+|+||+++|++....... ...........+..+..+|||+|+++++++++..
T Consensus 180 ~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~ 257 (280)
T 3nrc_A 180 GVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF--KKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMA 257 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH--HHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch--HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 999999999999999999988 9999999999999987653211 1122222334566789999999999999999765
Q ss_pred ceE
Q 039397 262 TYV 264 (349)
Q Consensus 262 ~~i 264 (349)
.++
T Consensus 258 ~~~ 260 (280)
T 3nrc_A 258 TGI 260 (280)
T ss_dssp TTC
T ss_pred CCc
Confidence 554
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=281.31 Aligned_cols=219 Identities=21% Similarity=0.164 Sum_probs=178.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHH---cCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAK---RKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN-------------- 104 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~---~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d-------------- 104 (349)
+|++|+++||||++|||+++|++|++ +|++|++++|++++++++.+++.. .+.++..+.+|
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 57899999999999999999999999 899999999999888877766632 24568888888
Q ss_pred cc--cCCCcc--eeeecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC---CCeEEEEeccccccC
Q 039397 105 NK--ESKAVD--HLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES---NGRVVVNASVENWLP 175 (349)
Q Consensus 105 ~~--~~g~iD--vlVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---~g~IV~isS~~~~~~ 175 (349)
.+ .+|++| +||||||+... .++.+..+.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 162 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence 12 457889 99999998643 4566523568999999999999999999999999775 389999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc-cchhhhhHHHHhhhcCCCCHHHHHHHHH
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE-DGAEMQWKEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~ 254 (349)
.++...|++||+|+++|+++++.|+++ |+||+|+||+++|++........ ............+..+..+|||+|+.++
T Consensus 163 ~~~~~~Y~asKaa~~~~~~~la~e~~~-i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~ 241 (259)
T 1oaa_A 163 YKGWGLYCAGKAARDMLYQVLAAEEPS-VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLL 241 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHhhCCC-ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHH
Confidence 999999999999999999999999976 99999999999999865321100 1101111122334668899999999999
Q ss_pred HHHhcCCceE
Q 039397 255 SGACRGDTYV 264 (349)
Q Consensus 255 ~l~~~~~~~i 264 (349)
+++++ .+++
T Consensus 242 ~l~~~-~~~i 250 (259)
T 1oaa_A 242 GLLQK-DTFQ 250 (259)
T ss_dssp HHHHH-CCSC
T ss_pred HHHhh-cccc
Confidence 99986 4454
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=282.89 Aligned_cols=218 Identities=21% Similarity=0.249 Sum_probs=176.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|++|+++||||++|||++++++|+++|++|++++|+.+ ++..+++...+.++..+.+| .+.+|
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG 78 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999999876 44444554334567778888 23457
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++...|++||+|
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 157 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQF-PLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHG 157 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHH
Confidence 99999999999877777776 4689999999999999999999999997654 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch---hh---hhH-HHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA---EM---QWK-EEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~---~~---~~~-~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+++++++++.|++++ |+||+|+||+++|++........... .. ... ....+..+..+|||+|+++++++++.
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 237 (255)
T 2q2v_A 158 VVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA 237 (255)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCc
Confidence 999999999999988 99999999999999864321000000 00 000 11234567889999999999999876
Q ss_pred CceE
Q 039397 261 DTYV 264 (349)
Q Consensus 261 ~~~i 264 (349)
..++
T Consensus 238 ~~~~ 241 (255)
T 2q2v_A 238 GSQV 241 (255)
T ss_dssp GTTC
T ss_pred cCCC
Confidence 5444
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=274.78 Aligned_cols=204 Identities=24% Similarity=0.182 Sum_probs=176.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEec--------------cccCCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d--------------~~~~g~ 110 (349)
++|+++||||++|||+++|++|+++|++|++++|+.+++++...++. ..+..+..+.+| .+.+|+
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999999999998888776662 334578888888 234579
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
+|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++|++|+++|..+..+.++...|++||+|++
T Consensus 81 id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~ 159 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEEL-SEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAAR 159 (235)
T ss_dssp CSEEEECCCCCCCCCTTTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCccccccCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHH
Confidence 9999999999888888776 568999999999999999999999999777899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+|+++++.+ .. |+||+|+||+++|++......... ..+..+|||+|+++++++++...++
T Consensus 160 ~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~------------~~~~~~p~dva~~v~~l~~~~~~~~ 220 (235)
T 3l77_A 160 ALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKPK------------EKGYLKPDEIAEAVRCLLKLPKDVR 220 (235)
T ss_dssp HHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCCCG------------GGTCBCHHHHHHHHHHHHTSCTTCC
T ss_pred HHHHHHhhc--CCCeEEEEEeCCccccccccccCCccc------------ccCCCCHHHHHHHHHHHHcCCCCCc
Confidence 999999554 44 999999999999999875432111 1267899999999999999987654
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=284.16 Aligned_cols=218 Identities=17% Similarity=0.155 Sum_probs=180.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+++|+++||||++|||+++|++|+++|++|++++ |+.+.+++...++...+.++..+.+| .+.+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 36789999999999999999999999999999999 55555555555555555678888898 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++.+.|++||+
T Consensus 102 g~id~li~nAg~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 180 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKM-TKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKA 180 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCcCCCcchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHH
Confidence 799999999999888877776 468999999999999999999999999754 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
|+++|+++++.|++++ |+||+|+||+++|++.+....... ........+.++..+|||+|+++++++++...+++
T Consensus 181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~it 256 (269)
T 3gk3_A 181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVL---EAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVT 256 (269)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCC
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHH---HHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCee
Confidence 9999999999999988 999999999999999875422111 00112234556788999999999999998876654
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-38 Score=280.73 Aligned_cols=216 Identities=19% Similarity=0.216 Sum_probs=176.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcce
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDH 113 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDv 113 (349)
+|++|+++||||++|||++++++|+++|++|++++|++++++++. ++ .++..+.+| .+.++++|+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 77 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQFANEVERLDV 77 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHHHHHhCCCCE
Confidence 578999999999999999999999999999999999988777654 32 256777888 234689999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCC-CchhhHHHHHHHHH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLP-RMSLYASAKAALVT 191 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~-~~~~Y~asKaal~~ 191 (349)
||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.+ +...|++||+|+++
T Consensus 78 lv~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~ 156 (246)
T 2ag5_A 78 LFNVAGFVHHGTVLDC-EEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIG 156 (246)
T ss_dssp EEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHH
T ss_pred EEECCccCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHH
Confidence 9999999887777776 468999999999999999999999999754 48999999999998888 89999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc--cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE--DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++++++.|++++ |+||+|+||+++|++........ ............+.++..+|||+|+++++++++...+++
T Consensus 157 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~t 233 (246)
T 2ag5_A 157 LTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233 (246)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCC
Confidence 999999999987 99999999999999754311100 000011111123456788999999999999987655543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=282.19 Aligned_cols=222 Identities=19% Similarity=0.179 Sum_probs=181.3
Q ss_pred hccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEec------------
Q 039397 38 NNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLN------------ 104 (349)
Q Consensus 38 ~~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d------------ 104 (349)
+.+++.++.+|+++||||++|||+++|++|+++|++|+++ +|+.+++++..+++.....++.++.+|
T Consensus 17 n~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 96 (267)
T 4iiu_A 17 NLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLE 96 (267)
T ss_dssp --------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred hhhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 3445667899999999999999999999999999999775 566677777766665445678888988
Q ss_pred --cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccc--cCCCeEEEEeccccccCCCCch
Q 039397 105 --NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLH--ESNGRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 --~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~--~~~g~IV~isS~~~~~~~~~~~ 180 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|++++++++++.|. +++|+||++||.++..+.++..
T Consensus 97 ~~~~~~g~id~li~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 175 (267)
T 4iiu_A 97 HEIAQHGAWYGVVSNAGIARDAAFPAL-SNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQV 175 (267)
T ss_dssp HHHHHHCCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCH
T ss_pred HHHHHhCCccEEEECCCCCCCCccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCc
Confidence 3456899999999999888877776 4689999999999999999999999884 4458999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+++|+++++.|++++ |+|++|+||+++|++.... ...........+..+..+|||+|+++++++++
T Consensus 176 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~ 250 (267)
T 4iiu_A 176 NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-----ESALKEAMSMIPMKRMGQAEEVAGLASYLMSD 250 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-----HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence 99999999999999999999988 9999999999999997643 11112222334567788999999999999998
Q ss_pred CCceEE
Q 039397 260 GDTYVK 265 (349)
Q Consensus 260 ~~~~i~ 265 (349)
...+++
T Consensus 251 ~~~~it 256 (267)
T 4iiu_A 251 IAGYVT 256 (267)
T ss_dssp GGTTCC
T ss_pred cccCcc
Confidence 766554
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=293.84 Aligned_cols=214 Identities=19% Similarity=0.173 Sum_probs=180.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC----------cchhhhHHHHhcCCCCeEEEEEec-------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR----------ENRLQGSTIDEYNPINEVTLVSLN------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~----------~~~l~~~~~~~~~~~~~~~~~~~d------- 104 (349)
+.+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++...++...+.++..+.+|
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 101 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA 101 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence 456899999999999999999999999999999999998 666777777775555678888888
Q ss_pred -------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-------CCeEEEEecc
Q 039397 105 -------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-------NGRVVVNASV 170 (349)
Q Consensus 105 -------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------~g~IV~isS~ 170 (349)
.+++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++. +|+||++||.
T Consensus 102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~ 180 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANT-SEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG 180 (322)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence 3456899999999999888887776 568999999999999999999999998642 2799999999
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHH
Q 039397 171 ENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDF 249 (349)
Q Consensus 171 ~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv 249 (349)
++..+.++...|++||+|+++|+++++.|++++ |+||+|+|| ++|++.......... ......+..+|||+
T Consensus 181 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-------~~~~~~~~~~pedv 252 (322)
T 3qlj_A 181 AGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-------TQDQDFDAMAPENV 252 (322)
T ss_dssp HHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------CCTTCGGGT
T ss_pred HHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-------ccccccCCCCHHHH
Confidence 999999999999999999999999999999988 999999999 999998764322111 11122346789999
Q ss_pred HHHHHHHHhcCCceE
Q 039397 250 ARLIVSGACRGDTYV 264 (349)
Q Consensus 250 A~~i~~l~~~~~~~i 264 (349)
|+++++++++...++
T Consensus 253 a~~v~~L~s~~~~~i 267 (322)
T 3qlj_A 253 SPLVVWLGSAEARDV 267 (322)
T ss_dssp HHHHHHHTSGGGGGC
T ss_pred HHHHHHHhCccccCC
Confidence 999999999876554
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=283.30 Aligned_cols=216 Identities=18% Similarity=0.185 Sum_probs=179.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+|++|+++||||++|||++++++|+++|++|++++|+++++++..+++ +..+..+.+| .+.+
T Consensus 2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3688999999999999999999999999999999999998888776665 3457778888 2346
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++|+||++||.++..+.++...|++||+|
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 157 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETG-RLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccC-CHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHH
Confidence 889999999999877777776 4689999999999999999999999998766999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC---eeEEEEecCcccCCCCCCccccccchhhhhHHH---HhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 189 LVTFYESLRFELNDE---VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE---REVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 189 l~~l~~~la~el~~~---I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+++++++++.|++++ |+||+|+||+++|++......... ....... ..+.++..+|||+|+++++++++..+
T Consensus 158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~ 235 (253)
T 1hxh_A 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGV--SKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESS 235 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTC--CHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhh--hHHHHhhhhccCccCCCCCHHHHHHHHHHHcCcccc
Confidence 999999999999653 999999999999998643211000 0000001 23445678999999999999988655
Q ss_pred eE
Q 039397 263 YV 264 (349)
Q Consensus 263 ~i 264 (349)
++
T Consensus 236 ~~ 237 (253)
T 1hxh_A 236 VM 237 (253)
T ss_dssp TC
T ss_pred CC
Confidence 54
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=281.57 Aligned_cols=216 Identities=17% Similarity=0.122 Sum_probs=172.8
Q ss_pred CCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+++||+++||||+ +|||+++|++|+++|++|++++|+.+ .++..+++......+..+.+| .+.
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5899999999999 99999999999999999999999875 333333331111125667787 345
Q ss_pred CCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhH
Q 039397 108 SKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|++++|+||++||.++..+.++...|+
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 175 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFKGGVIDT-SREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMG 175 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGSSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHH
T ss_pred cCCCCEEEECCCCCCcccCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHH
Confidence 6899999999998764 455565 56899999999999999999999999986679999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++++++++.|++++ |+||+|+||+++|++...... ............+..+..+|||+|+++++++++...
T Consensus 176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~ 253 (285)
T 2p91_A 176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG--FHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWAR 253 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT--HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccc
Confidence 99999999999999999988 999999999999998654211 010111112234556788999999999999987544
Q ss_pred e
Q 039397 263 Y 263 (349)
Q Consensus 263 ~ 263 (349)
+
T Consensus 254 ~ 254 (285)
T 2p91_A 254 A 254 (285)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=280.01 Aligned_cols=210 Identities=17% Similarity=0.205 Sum_probs=177.1
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
|..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+..+.+| .+
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~ 77 (260)
T 1nff_A 1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVT 77 (260)
T ss_dssp -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---cCceEEEecCCCHHHHHHHHHHHHH
Confidence 4457899999999999999999999999999999999999888777666553 236777888 23
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++|
T Consensus 78 ~~g~iD~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 156 (260)
T 1nff_A 78 AFGGLHVLVNNAGILNIGTIEDY-ALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTAT 156 (260)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHH
Confidence 45799999999999877777775 468999999999999999999999999764 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|+|+++++++++.|++++ |+||+|+||+++|++.. . . .. . +. ..+.++..+|||+|+++++++++...+
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~--~~-~--~~--~~~~~~~~~~~dvA~~v~~l~s~~~~~ 226 (260)
T 1nff_A 157 KFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-V--PE-D--IF--QTALGRAAEPVEVSNLVVYLASDESSY 226 (260)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-S--CT-T--CS--CCSSSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-c--hh-h--HH--hCccCCCCCHHHHHHHHHHHhCccccC
Confidence 999999999999999887 99999999999999864 1 1 11 1 00 224457889999999999999875443
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=280.58 Aligned_cols=215 Identities=19% Similarity=0.129 Sum_probs=170.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcCC-CCeEEEEEecccc-------------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNP-INEVTLVSLNNKE------------- 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~~-~~~~~~~~~d~~~------------- 107 (349)
.+|++|+++||||++|||+++|++|+++|++|++++| ++++++++.+++... +..+..+.+|...
T Consensus 7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence 3578999999999999999999999999999999999 888777776666322 3467778888433
Q ss_pred -----CCCcceeeecCcCCCCccccccCCc-----------chHHHHHHhHhhhhHHHHHHhccccccCC------CeEE
Q 039397 108 -----SKAVDHLVNTASLGHTFFFEEVTDT-----------SIFPRLLDINFWGNVYPTFVALPYLHESN------GRVV 165 (349)
Q Consensus 108 -----~g~iDvlVnnAg~~~~~~~~~~~~~-----------~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------g~IV 165 (349)
+|++|+||||||+....++.+. +. ++|++++++|+.|+++++++++|+|+++. |+||
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv 165 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASAYYPTPLLPG-DDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV 165 (276)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCC------------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCCcccc-CcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence 3689999999999877766665 45 78999999999999999999999997444 8999
Q ss_pred EEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcC-C
Q 039397 166 VNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVA-G 243 (349)
Q Consensus 166 ~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 243 (349)
++||.++..+.++...|++||+|+++|+++++.|++++ |+||+|+||+++|+ ... . +. .........+..+ .
T Consensus 166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~-~--~~-~~~~~~~~~p~~r~~ 239 (276)
T 1mxh_A 166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAM-P--QE-TQEEYRRKVPLGQSE 239 (276)
T ss_dssp EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSS-C--HH-HHHHHHTTCTTTSCC
T ss_pred EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccC-C--HH-HHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999988 99999999999999 221 1 11 1111111234456 8
Q ss_pred CCHHHHHHHHHHHHhcCCceE
Q 039397 244 GPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 244 ~~~edvA~~i~~l~~~~~~~i 264 (349)
.+|||+|+++++++++...++
T Consensus 240 ~~~~dva~~v~~l~s~~~~~~ 260 (276)
T 1mxh_A 240 ASAAQIADAIAFLVSKDAGYI 260 (276)
T ss_dssp BCHHHHHHHHHHHHSGGGTTC
T ss_pred CCHHHHHHHHHHHhCccccCc
Confidence 899999999999998765544
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-38 Score=283.37 Aligned_cols=217 Identities=20% Similarity=0.221 Sum_probs=177.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||++|||++++++|+++|++|++++|++++++++.+++. .+..+.+| .+++
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999888777665542 36777888 2446
Q ss_pred CCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|++++|+||++||..+..+.++...|++||+
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 159 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEET-SAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKG 159 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHH
Confidence 799999999998754 556665 568899999999999999999999999776799999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhH--HHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWK--EEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+++++++++.|++++ |+||+|+||+++|++................ ....+.++..+|||+|+++++++++ ..++
T Consensus 160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~~i 238 (270)
T 1yde_A 160 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFC 238 (270)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTC
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CCCc
Confidence 9999999999999988 9999999999999986432111111011111 1234567788999999999999987 4554
Q ss_pred E
Q 039397 265 K 265 (349)
Q Consensus 265 ~ 265 (349)
+
T Consensus 239 t 239 (270)
T 1yde_A 239 T 239 (270)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=280.42 Aligned_cols=221 Identities=16% Similarity=0.104 Sum_probs=174.2
Q ss_pred cCCCCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------
Q 039397 40 FYSENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN------------- 104 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------------- 104 (349)
....++++|++|||||+ +|||+++|++|+++|++|++++|+....+.. +++......+..+.+|
T Consensus 7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 85 (271)
T 3ek2_A 7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRI-TEFAAEFGSELVFPCDVADDAQIDALFAS 85 (271)
T ss_dssp --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHH-HHHHHHcCCcEEEECCCCCHHHHHHHHHH
Confidence 34567899999999999 9999999999999999999999985443332 2331112246778888
Q ss_pred -cccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCc
Q 039397 105 -NKESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~ 179 (349)
.+.+|++|+||||||+... .++.+..+.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++.
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~ 164 (271)
T 3ek2_A 86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-DASLLTLSYLGAERAIPNY 164 (271)
T ss_dssp HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-EEEEEEEECGGGTSBCTTT
T ss_pred HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-CceEEEEeccccccCCCCc
Confidence 3556899999999999765 555552356899999999999999999999999974 6899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
..|++||+|+++|+++++.|++++ |+||+|+||+++|++....... ...........+..+..+|||+|+.++++++
T Consensus 165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~pedva~~i~~l~s 242 (271)
T 3ek2_A 165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF--GKILDFVESNSPLKRNVTIEQVGNAGAFLLS 242 (271)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHH--HHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccch--HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC
Confidence 999999999999999999999988 9999999999999987653211 1122222344566788999999999999999
Q ss_pred cCCceE
Q 039397 259 RGDTYV 264 (349)
Q Consensus 259 ~~~~~i 264 (349)
+...++
T Consensus 243 ~~~~~~ 248 (271)
T 3ek2_A 243 DLASGV 248 (271)
T ss_dssp GGGTTC
T ss_pred cccCCe
Confidence 865544
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=280.01 Aligned_cols=219 Identities=16% Similarity=0.129 Sum_probs=174.4
Q ss_pred CCCCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------
Q 039397 41 YSENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------- 104 (349)
+.+++++|+++||||+ +|||+++|++|+++|++|++++|+++ .++..+++......+..+.+|
T Consensus 2 ~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (261)
T 2wyu_A 2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGV 80 (261)
T ss_dssp EEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred CccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence 4457889999999999 99999999999999999999999875 333333331111235677888
Q ss_pred cccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCch
Q 039397 105 NKESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~ 180 (349)
.+.+|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++..
T Consensus 81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~ 158 (261)
T 2wyu_A 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDT-RRQDWLLALEVSAYSLVAVARRAEPLLRE-GGGIVTLTYYASEKVVPKYN 158 (261)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEEEEEEECGGGTSBCTTCH
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHhcc-CCEEEEEecccccCCCCCch
Confidence 2345799999999998764 556665 56899999999999999999999999974 58999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+++++++++.|++++ |+||+|+||+++|++...... ............+..+..+|||+|+++++++++
T Consensus 159 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~ 236 (261)
T 2wyu_A 159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG--FTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSP 236 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT--HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCh
Confidence 99999999999999999999988 999999999999998653211 010111112234556789999999999999987
Q ss_pred CCceE
Q 039397 260 GDTYV 264 (349)
Q Consensus 260 ~~~~i 264 (349)
...++
T Consensus 237 ~~~~~ 241 (261)
T 2wyu_A 237 LASGI 241 (261)
T ss_dssp GGTTC
T ss_pred hhcCC
Confidence 55443
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=282.09 Aligned_cols=217 Identities=18% Similarity=0.123 Sum_probs=174.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhc-CCCCeEEEEEecccc------------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEY-NPINEVTLVSLNNKE------------ 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~-~~~~~~~~~~~d~~~------------ 107 (349)
..+|++|+++||||++|||+++|++|+++|++|++++|+. ++++++.+++. ..+..+..+.+|...
T Consensus 18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence 3468899999999999999999999999999999999998 77777766653 334567788888443
Q ss_pred ------CCCcceeeecCcCCCCccc-----cc-----cCCcchHHHHHHhHhhhhHHHHHHhccccccC-------CCeE
Q 039397 108 ------SKAVDHLVNTASLGHTFFF-----EE-----VTDTSIFPRLLDINFWGNVYPTFVALPYLHES-------NGRV 164 (349)
Q Consensus 108 ------~g~iDvlVnnAg~~~~~~~-----~~-----~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------~g~I 164 (349)
+|++|+||||||+....++ .+ . +.++|++++++|+.|+++++++++|.|+++ .|+|
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i 176 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKT-VETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI 176 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CC-HHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence 4789999999999776665 34 3 458899999999999999999999999754 5799
Q ss_pred EEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCC
Q 039397 165 VVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG 243 (349)
Q Consensus 165 V~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (349)
|++||.++..+.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++ . .. +. .........+.++.
T Consensus 177 v~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~---~~-~~~~~~~~~p~~r~ 250 (288)
T 2x9g_A 177 VNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG---EE-EKDKWRRKVPLGRR 250 (288)
T ss_dssp EEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC---HH-HHHHHHHTCTTTSS
T ss_pred EEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC---hH-HHHHHHhhCCCCCC
Confidence 999999999999999999999999999999999999988 999999999999998 4 21 11 11111122345567
Q ss_pred -CCHHHHHHHHHHHHhcCCceEE
Q 039397 244 -GPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 244 -~~~edvA~~i~~l~~~~~~~i~ 265 (349)
.+|||+|+++++++++...+++
T Consensus 251 ~~~pedvA~~v~~l~s~~~~~it 273 (288)
T 2x9g_A 251 EASAEQIADAVIFLVSGSAQYIT 273 (288)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCC
T ss_pred CCCHHHHHHHHHHHhCccccCcc
Confidence 8999999999999998665554
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=280.17 Aligned_cols=219 Identities=16% Similarity=0.147 Sum_probs=170.8
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhh-hHHHHhcCCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-GSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~-~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
|++++.+|+++||||++|||+++|++|+++|++|++++|+.++.. ...+.+...+.++.++.+| .
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 80 (264)
T 3i4f_A 1 MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM 80 (264)
T ss_dssp -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 445667899999999999999999999999999999988765543 3333334444578889998 2
Q ss_pred ccCCCcceeeecCc--CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEecc-cc-ccCCCCch
Q 039397 106 KESKAVDHLVNTAS--LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASV-EN-WLPLPRMS 180 (349)
Q Consensus 106 ~~~g~iDvlVnnAg--~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~-~~-~~~~~~~~ 180 (349)
+.+|++|+|||||| .....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||. .+ ..+.++..
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~ 159 (264)
T 3i4f_A 81 SHFGKIDFLINNAGPYVFERKKLVDY-EEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRS 159 (264)
T ss_dssp HHHSCCCEEECCCCCCCCSCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCH
T ss_pred HHhCCCCEEEECCcccccCCCccccC-CHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCc
Confidence 44579999999999 4455666665 4689999999999999999999999997654 899999988 44 56778889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+++|+++++.|++++ |+||+|+||+++|++....... .........+.++..+|||+|+++++++++
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~p~~r~~~~~dva~~v~~l~s~ 235 (264)
T 3i4f_A 160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE----ARQLKEHNTPIGRSGTGEDIARTISFLCED 235 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH----HHHC--------CCCCHHHHHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH----HHHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999999999999988 9999999999999987654211 111122344667889999999999999998
Q ss_pred CCceE
Q 039397 260 GDTYV 264 (349)
Q Consensus 260 ~~~~i 264 (349)
...++
T Consensus 236 ~~~~i 240 (264)
T 3i4f_A 236 DSDMI 240 (264)
T ss_dssp GGTTC
T ss_pred ccCCC
Confidence 65544
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=290.56 Aligned_cols=211 Identities=19% Similarity=0.144 Sum_probs=179.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-------hhhHHHHhcCCCCeEEEEEec-----------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-------LQGSTIDEYNPINEVTLVSLN----------- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-------l~~~~~~~~~~~~~~~~~~~d----------- 104 (349)
.+++||++|||||++|||+++|++|+++|++|++++|+.++ +++..+++...+..+..+.+|
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 46899999999999999999999999999999999999875 334455554455678888898
Q ss_pred ---cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccC--CCC
Q 039397 105 ---NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLP--LPR 178 (349)
Q Consensus 105 ---~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~--~~~ 178 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||..+..+ .++
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~ 199 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDT-PTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQ 199 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTC-CHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSS
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCC
Confidence 3456899999999999888888776 5699999999999999999999999997765 99999999999887 788
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCc-ccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDE-VGITIATHGW-IGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
...|++||+|+++|+++++.|++ + |+||+|+||+ ++|++.+.... ..+..+..+|||+|++++++
T Consensus 200 ~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~------------~~~~~r~~~pedvA~~v~~L 266 (346)
T 3kvo_A 200 HCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGG------------PGIESQCRKVDIIADAAYSI 266 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC--------------CGGGCBCTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhcc------------ccccccCCCHHHHHHHHHHH
Confidence 99999999999999999999999 6 9999999995 99987542211 12345678999999999999
Q ss_pred HhcCCceEEcCc
Q 039397 257 ACRGDTYVKFPS 268 (349)
Q Consensus 257 ~~~~~~~i~~p~ 268 (349)
+++ .++++...
T Consensus 267 ~s~-~~~itG~~ 277 (346)
T 3kvo_A 267 FQK-PKSFTGNF 277 (346)
T ss_dssp HTS-CTTCCSCE
T ss_pred Hhc-CCCCCceE
Confidence 999 77665543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=279.08 Aligned_cols=217 Identities=15% Similarity=0.096 Sum_probs=172.6
Q ss_pred CCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
.++++|+++||||+ +|||+++|++|+++|++|++++|+. +.++..+++.........+.+| .+
T Consensus 5 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 5 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH
Confidence 35899999999999 9999999999999999999999987 3333333331111123567777 34
Q ss_pred cCCCcceeeecCcCCCC----ccccc-cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchh
Q 039397 107 ESKAVDHLVNTASLGHT----FFFEE-VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~----~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~ 181 (349)
++|++|+||||||+... .++.+ . +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...
T Consensus 84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~ 161 (265)
T 1qsg_A 84 VWPKFDGFVHSIGFAPGDQLDGDYVNAV-TREGFKIAHDISSYSFVAMAKACRSMLNP-GSALLTLSYLGAERAIPNYNV 161 (265)
T ss_dssp TCSSEEEEEECCCCCCGGGGSSCHHHHC-CHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEEECGGGTSBCTTTTH
T ss_pred HcCCCCEEEECCCCCCccccCCCccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHhcc-CCEEEEEcchhhccCCCCchH
Confidence 56899999999998763 45555 5 45899999999999999999999999964 589999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++||+|+++++++++.|++++ |+||+|+||+++|++...... ............+..+..+|||+|+++++++++.
T Consensus 162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~ 239 (265)
T 1qsg_A 162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD--FRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL 239 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT--HHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence 9999999999999999999988 999999999999998653211 0101111122335567899999999999999875
Q ss_pred CceE
Q 039397 261 DTYV 264 (349)
Q Consensus 261 ~~~i 264 (349)
..++
T Consensus 240 ~~~~ 243 (265)
T 1qsg_A 240 SAGI 243 (265)
T ss_dssp GTTC
T ss_pred hcCc
Confidence 5443
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=282.00 Aligned_cols=217 Identities=19% Similarity=0.235 Sum_probs=153.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.+++++|+++||||++|||+++|++|+++|++|++++|+++++++...++......+..+.+| .+.
T Consensus 4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999988888775556678889999 344
Q ss_pred CCCcceeeecCcCC---CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhH
Q 039397 108 SKAVDHLVNTASLG---HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~---~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+|++|+||||||+. ...++.+. +.++|++++++|+.|+++++++++|.|+++ +|+||++||.+++ ++...|+
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~ 159 (253)
T 3qiv_A 84 FGGIDYLVNNAAIFGGMKLDFLLTI-DPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG 159 (253)
T ss_dssp HSCCCEEEECCCCCCGGGGGCTTTS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred cCCCCEEEECCCcCCCCCCcccccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence 57999999999984 33445554 568999999999999999999999999754 5899999999987 4567899
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++|+++++.|++++ |+||+++||+++|++........ .........+..+..+|||+|+++++++++...
T Consensus 160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~ 236 (253)
T 3qiv_A 160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKE---MVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEAS 236 (253)
T ss_dssp CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------CCHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHH---HHHHHhccCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 99999999999999999988 99999999999999876532111 111112233456778899999999999987665
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 237 ~~t 239 (253)
T 3qiv_A 237 WIT 239 (253)
T ss_dssp TCC
T ss_pred CCC
Confidence 443
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=279.77 Aligned_cols=212 Identities=27% Similarity=0.308 Sum_probs=168.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+|+ |+++||||++|||+++|++|+++|++|++++|+.++++++.+++... ..+..+.+| .+.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 95 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF 95 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4566 99999999999999999999999999999999998888877776443 467788888 3456
Q ss_pred CCcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-C-eEEEEeccccccCCCCchhhHHH
Q 039397 109 KAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-G-RVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 109 g~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g-~IV~isS~~~~~~~~~~~~Y~as 185 (349)
|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|.|++++ | +||++||.++..+.++...|++|
T Consensus 96 g~iD~lvnnAG~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~as 174 (272)
T 2nwq_A 96 ATLRGLINNAGLALGTDPAQSC-DLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT 174 (272)
T ss_dssp SSCCEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHH
Confidence 899999999998764 666665 5689999999999999999999999997654 7 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
|+|+++|+++++.|++++ |+||+|+||+++|++.......... .... ........+|||+|+.+++++++..
T Consensus 175 Kaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~---~~~~-~~~~~~~~~pedvA~~v~~l~s~~~ 247 (272)
T 2nwq_A 175 KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQA---RYDK-TYAGAHPIQPEDIAETIFWIMNQPA 247 (272)
T ss_dssp HHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------CCCCBCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchH---HHHH-hhccCCCCCHHHHHHHHHHHhCCCc
Confidence 999999999999999988 9999999999999986532111100 0000 0111235799999999999999754
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=277.14 Aligned_cols=212 Identities=15% Similarity=0.084 Sum_probs=172.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-e--cCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCccee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLV-A--RRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHL 114 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~--r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvl 114 (349)
||+++||||++|||+++|++|+++|++|+++ + |+.+++++...++ .+ ......+ .+.+|++|+|
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~--~~~~~~~~v~~~~~~~~~~~g~iD~l 76 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG--TIALAEQKPERLVDATLQHGEAIDTI 76 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT--EEECCCCCGGGHHHHHGGGSSCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC--CcccCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999999999999 6 9988887776665 11 1111111 4567899999
Q ss_pred eecCcCCCC---ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 115 VNTASLGHT---FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 115 VnnAg~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|||||+... .++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+|++
T Consensus 77 v~~Ag~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 155 (244)
T 1zmo_A 77 VSNDYIPRPMNRLPLEGT-SEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATV 155 (244)
T ss_dssp EECCCCCTTGGGCCSTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHH
T ss_pred EECCCcCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHH
Confidence 999999877 677775 568999999999999999999999999765 489999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCC---CCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMT---KGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++++.|++++ |+||+|+||+++|++. ..... +.....+.....+..+..+|||+|+++++++++...+++
T Consensus 156 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~t 232 (244)
T 1zmo_A 156 ALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN--NPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIV 232 (244)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGT
T ss_pred HHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc--hHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence 9999999999988 9999999999999987 32110 110011111133556788999999999999998766543
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=279.69 Aligned_cols=216 Identities=17% Similarity=0.157 Sum_probs=173.7
Q ss_pred CCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+|+||+++||||+ +|||+++|++|+++|++|++++|+.+ .++..+++......+..+.+| .+.
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999 99999999999999999999999976 333333331111235677788 345
Q ss_pred CCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhH
Q 039397 108 SKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+|++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...|+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~ 159 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLET-SKSAFNTAMEISVYSLIELTNTLKPLLNN-GASVLTLSYLGSTKYMAHYNVMG 159 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEEECGGGTSBCTTCHHHH
T ss_pred cCCCCEEEECCccCccccCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHhcc-CCEEEEEecchhcCCCCCchhhH
Confidence 6899999999998764 456665 56899999999999999999999999975 58999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++++++++.|++++ |+||+|+||+++|++...... .+. .........+..+..+|||+|+++++++++...
T Consensus 160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~-~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~ 237 (275)
T 2pd4_A 160 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-FRM-ILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSS 237 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-HHH-HHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc-cHH-HHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccc
Confidence 99999999999999999988 999999999999998654211 000 111112234556788999999999999987554
Q ss_pred eE
Q 039397 263 YV 264 (349)
Q Consensus 263 ~i 264 (349)
++
T Consensus 238 ~~ 239 (275)
T 2pd4_A 238 GV 239 (275)
T ss_dssp TC
T ss_pred CC
Confidence 43
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=271.19 Aligned_cols=203 Identities=23% Similarity=0.207 Sum_probs=165.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-----------ccCCCcceeee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-----------KESKAVDHLVN 116 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-----------~~~g~iDvlVn 116 (349)
|++|||||++|||+++|++|+++|++|++++|+++++++...++ ..++..+.+|. +.....|+|||
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 68999999999999999999999999999999999888776665 34566777881 11233499999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESL 196 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~l 196 (349)
|||+....++.+. +.++|++++++|+.|+++++++++|+|++++++||++||..+..+.++.+.|++||+|+++|++++
T Consensus 79 ~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l 157 (230)
T 3guy_A 79 SAGSGYFGLLQEQ-DPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESV 157 (230)
T ss_dssp CCCCCCCSCGGGS-CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred eCCcCCCCccccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHH
Confidence 9999888888876 569999999999999999999999999887889999999999999999999999999999999999
Q ss_pred HHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh-cCCceEEc
Q 039397 197 RFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC-RGDTYVKF 266 (349)
Q Consensus 197 a~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~-~~~~~i~~ 266 (349)
+.|++++ |+||+|+||+++|++.+.... ..+..+..+|||+|+.++++++ +...+++.
T Consensus 158 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~------------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg 217 (230)
T 3guy_A 158 RLELKGKPMKIIAVYPGGMATEFWETSGK------------SLDTSSFMSAEDAALMIHGALANIGNGYVSD 217 (230)
T ss_dssp HHHTTTSSCEEEEEEECCC----------------------------CCCHHHHHHHHHHHCCEETTEEEEE
T ss_pred HHHHHhcCeEEEEEECCcccChHHHhcCC------------CCCcccCCCHHHHHHHHHHHHhCcCCCCccc
Confidence 9999988 999999999999998765321 1124578899999999999998 45556654
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=272.79 Aligned_cols=204 Identities=19% Similarity=0.207 Sum_probs=163.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC-
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG- 121 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~- 121 (349)
+++++|+++||||++|||+++|++|+++|++|++++|+.+ .|+.+... +..-.+++|++|+||||||+.
T Consensus 2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------~D~~~~~~----v~~~~~~~g~id~lv~nAg~~~ 71 (223)
T 3uce_A 2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------LDISDEKS----VYHYFETIGAFDHLIVTAGSYA 71 (223)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------CCTTCHHH----HHHHHHHHCSEEEEEECCCCCC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------cCCCCHHH----HHHHHHHhCCCCEEEECCCCCC
Confidence 4688999999999999999999999999999999999864 11110000 000023448999999999987
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhc
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~ 201 (349)
...++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...|++||+|+++|+++++.|++
T Consensus 72 ~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~ 149 (223)
T 3uce_A 72 PAGKVVDV-EVTQAKYAFDTKFWGAVLAAKHGARYLKQ-GGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELA 149 (223)
T ss_dssp CCSCTTTS-CHHHHHHHHHHHHHHHHHHHHHHGGGEEE-EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcccC-CHHHHHhhheeeeeeHHHHHHHHHhhccC-CeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence 55666665 56899999999999999999999999965 58999999999999999999999999999999999999999
Q ss_pred CCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 202 DEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 202 ~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
+ |+||+|+||+++|++....................+.++..+|||+|++++++++.
T Consensus 150 ~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 206 (223)
T 3uce_A 150 P-IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN 206 (223)
T ss_dssp T-SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC
T ss_pred C-cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC
Confidence 8 99999999999999987643221111112223345667889999999999999984
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=278.45 Aligned_cols=208 Identities=22% Similarity=0.262 Sum_probs=164.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
..++++|+++||||++|||+++|++|+++|++|++++|+.+++++ +..+.+| .+.
T Consensus 16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (253)
T 2nm0_A 16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----------FLAVKCDITDTEQVEQAYKEIEET 84 (253)
T ss_dssp ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-----------ceEEEecCCCHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999998766542 4455666 345
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||.++..+.++...|++||
T Consensus 85 ~g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 163 (253)
T 2nm0_A 85 HGPVEVLIANAGVTKDQLLMRM-SEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASK 163 (253)
T ss_dssp TCSCSEEEEECSCCTTTC---C-CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence 7899999999999877777776 458899999999999999999999999764 58999999999998888899999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++++.|++++ |+||+|+||+++|++..... +. .........+..+..+|||+|+.+++++++...+++
T Consensus 164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~-~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~t 239 (253)
T 2nm0_A 164 AGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT---DE-QRANIVSQVPLGRYARPEEIAATVRFLASDDASYIT 239 (253)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-------------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC---HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCc
Confidence 99999999999999988 99999999999999875421 11 111111223456788999999999999988655543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=278.65 Aligned_cols=199 Identities=21% Similarity=0.180 Sum_probs=168.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+++++|++|||||++|||+++|++|+++|++|++++|+.++.++ ..+..+.+| .+.+
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD---------PDIHTVAGDISKPETADRIVREGIERF 94 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS---------TTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------CceEEEEccCCCHHHHHHHHHHHHHHC
Confidence 35789999999999999999999999999999999998765442 246777787 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccC--CCCchhhHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLP--LPRMSLYASA 185 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~--~~~~~~Y~as 185 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||..+..+ .++...|++|
T Consensus 95 g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s 173 (260)
T 3un1_A 95 GRIDSLVNNAGVFLAKPFVEM-TQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLT 173 (260)
T ss_dssp SCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHH
Confidence 899999999999888888776 4689999999999999999999999997654 89999999888744 4556899999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
|+|+++|+++++.|++++ |+||+|+||+++|++.... .........+.++..+|||+|++++++..
T Consensus 174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-------~~~~~~~~~p~~r~~~~~dva~av~~L~~ 240 (260)
T 3un1_A 174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE-------THSTLAGLHPVGRMGEIRDVVDAVLYLEH 240 (260)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-------GHHHHHTTSTTSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-------HHHHHhccCCCCCCcCHHHHHHHHHHhcc
Confidence 999999999999999998 9999999999999987531 11122334466788999999999999943
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=276.08 Aligned_cols=208 Identities=20% Similarity=0.214 Sum_probs=147.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------cccCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------NKESK 109 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------~~~~g 109 (349)
|++++|+++||||++|||+++|++|++ |++|++++|+++++++..+ ...+..+.+| .+.++
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHHHHHHHHHHHhcC
Confidence 357899999999999999999999988 9999999999887765543 1246677777 24467
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++|+||++||.++..+.++...|++||+|+
T Consensus 75 ~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 153 (245)
T 3e9n_A 75 HVDTLVHAAAVARDTTIEAG-SVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHAL 153 (245)
T ss_dssp CCSEEEECC----------C-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHHHH
Confidence 99999999999887777775 56899999999999999999999999987779999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++|+++++.|++++ |+||+|+||+++|++.+....... ......+..+|||+|++++++++++.....
T Consensus 154 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~~~p~dvA~~i~~l~~~~~~~~~ 222 (245)
T 3e9n_A 154 RGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG--------TNFRPEIYIEPKEIANAIRFVIDAGETTQI 222 (245)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCC------------------------CCGGGSCHHHHHHHHHHHHTSCTTEEE
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhh--------cccccccCCCHHHHHHHHHHHHcCCCccce
Confidence 99999999999988 999999999999998775432211 112234678999999999999998876543
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-37 Score=273.76 Aligned_cols=206 Identities=24% Similarity=0.306 Sum_probs=164.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcce
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDH 113 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDv 113 (349)
|+++||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+..+.+| .+.+|++|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 689999999999999999999999999999999988887776663 357778888 345789999
Q ss_pred eeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 114 LVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 114 lVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+|+++
T Consensus 78 lvnnAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 156 (248)
T 3asu_A 78 LVNNAGLALGMEPAHKA-SVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_dssp EEECCCCCCCCSCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEECCCcCCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence 999999874 4566665 568999999999999999999999999654 5999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCccc-CCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 192 FYESLRFELNDE-VGITIATHGWIG-IEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
|+++++.|++++ |+||+|+||+++ |++.......... . ... ........+|||+|+.+++++++..
T Consensus 157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~-~--~~~-~~~~~~~~~p~dvA~~v~~l~s~~~ 224 (248)
T 3asu_A 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDG-K--AEK-TYQNTVALTPEDVSEAVWWVSTLPA 224 (248)
T ss_dssp HHHHHHHHTTTSCCEEEEEEECSBCC--------------------------CCBCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchH-H--HHH-HHhccCCCCHHHHHHHHHHHhcCCc
Confidence 999999999988 999999999999 9986432110000 0 000 0011235699999999999999753
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=279.38 Aligned_cols=220 Identities=20% Similarity=0.209 Sum_probs=169.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc-cC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK-ES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~-~~ 108 (349)
+|++|+++||||++|||+++|++|+++|++|++++|+++++++...++...+.++..+.+| .+ .+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999999988877776664334567888888 12 27
Q ss_pred CCcceeeecCcC--C-----CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCch
Q 039397 109 KAVDHLVNTASL--G-----HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 109 g~iDvlVnnAg~--~-----~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~ 180 (349)
|++|+||||||. . ...++.+. +.++|++++++|+.++++++++++|+|++++ |+||++||.++..+. +..
T Consensus 82 g~id~lvnnAg~g~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~ 159 (260)
T 2qq5_A 82 GRLDVLVNNAYAGVQTILNTRNKAFWET-PASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNV 159 (260)
T ss_dssp TCCCEEEECCCTTHHHHHHTTTCCTTTS-CTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSH
T ss_pred CCceEEEECCccccccccccCCCccccC-CHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCC
Confidence 899999999953 2 23455665 4589999999999999999999999997654 999999999988754 468
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhh-hHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQ-WKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
.|++||+|+++|+++++.|++++ |+||+|+||+++|++.............. ......+..+..+|||+|++++++++
T Consensus 160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s 239 (260)
T 2qq5_A 160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT 239 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhc
Confidence 99999999999999999999988 99999999999999976432111100000 00011223344689999999999999
Q ss_pred cCCc-eEE
Q 039397 259 RGDT-YVK 265 (349)
Q Consensus 259 ~~~~-~i~ 265 (349)
+... +++
T Consensus 240 ~~~~~~it 247 (260)
T 2qq5_A 240 DPNILSLS 247 (260)
T ss_dssp CTTGGGGT
T ss_pred Cccccccc
Confidence 8753 554
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=278.82 Aligned_cols=218 Identities=18% Similarity=0.176 Sum_probs=178.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++|++|+++||||++|||+++|++|+++|++|++++|+.+++++...++.. .+..+.+| .+++
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---GGFAVEVDVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT---CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999999999999999998887766555432 45677787 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||..+..+.++...|++||
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (263)
T 3ak4_A 85 GGFDLLCANAGVSTMRPAVDI-TDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK 163 (263)
T ss_dssp TCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCEEEECCCcCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHH
Confidence 799999999999877777776 468999999999999999999999999765 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc----ccc---chhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM----LED---GAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+|+++++++++.|++++ |+||+|+||+++|++...... ... ...........+.++..+|||+|++++++++
T Consensus 164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s 243 (263)
T 3ak4_A 164 FAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLAS 243 (263)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999887 999999999999998643210 000 0000111122345678899999999999998
Q ss_pred cCCceE
Q 039397 259 RGDTYV 264 (349)
Q Consensus 259 ~~~~~i 264 (349)
+...++
T Consensus 244 ~~~~~~ 249 (263)
T 3ak4_A 244 DAARFM 249 (263)
T ss_dssp GGGTTC
T ss_pred ccccCC
Confidence 765444
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-37 Score=284.55 Aligned_cols=216 Identities=15% Similarity=0.086 Sum_probs=176.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHHhc-CCCCeEEEEEeccccC-------------
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRENRLQGSTIDEY-NPINEVTLVSLNNKES------------- 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~------------- 108 (349)
+|++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++. ..+..+..+.+|....
T Consensus 43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 122 (328)
T 2qhx_A 43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 122 (328)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence 48899999999999999999999999999999999 99888887776653 2335677888884433
Q ss_pred ------------------CCcceeeecCcCCCCccccccCC-------------cchHHHHHHhHhhhhHHHHHHhcccc
Q 039397 109 ------------------KAVDHLVNTASLGHTFFFEEVTD-------------TSIFPRLLDINFWGNVYPTFVALPYL 157 (349)
Q Consensus 109 ------------------g~iDvlVnnAg~~~~~~~~~~~~-------------~~~~~~~~~vN~~g~~~l~~~~lp~m 157 (349)
|++|+||||||+....++.+.++ .++|++++++|+.|+++++++++|.|
T Consensus 123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 202 (328)
T 2qhx_A 123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 202 (328)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999987777666531 58899999999999999999999999
Q ss_pred ccC-------CCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch
Q 039397 158 HES-------NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA 229 (349)
Q Consensus 158 ~~~-------~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~ 229 (349)
+++ .|+||++||..+..+.++...|++||+|+++|+++|+.|++++ |+||+|+||+++|++ ... +.
T Consensus 203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~----~~- 276 (328)
T 2qhx_A 203 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP----PA- 276 (328)
T ss_dssp HHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC----HH-
T ss_pred HhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc----HH-
Confidence 654 4899999999999999999999999999999999999999988 999999999999998 331 11
Q ss_pred hhhhHHHHhhhc-CCCCHHHHHHHHHHHHhcCCceEE
Q 039397 230 EMQWKEEREVHV-AGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 230 ~~~~~~~~~~~~-~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
.........+.. +..+|||+|+++++++++...+++
T Consensus 277 ~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~it 313 (328)
T 2qhx_A 277 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYIT 313 (328)
T ss_dssp HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCcc
Confidence 111111223445 788999999999999987655543
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=281.89 Aligned_cols=217 Identities=20% Similarity=0.142 Sum_probs=163.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-----cchhhhHHHHhcCCCCeEEEEEec-------------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR-----ENRLQGSTIDEYNPINEVTLVSLN------------- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-----~~~l~~~~~~~~~~~~~~~~~~~d------------- 104 (349)
|+|++|+++|||||+|||+++|++|+++|++|++++|+ .++++++...+...+.++..+.+|
T Consensus 1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 35779999999999999999999999999999998886 334444444443334568888888
Q ss_pred -cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccccc-CCCCchh
Q 039397 105 -NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWL-PLPRMSL 181 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~-~~~~~~~ 181 (349)
.+.+|++|+||||||+...+++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||+++.. +.++.+.
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~ 159 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAF-TPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP 159 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHH
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchh
Confidence 3456899999999999888888886 468999999999999999999999999765 48999999999984 4577899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc--hhh-hh--------H----HH-HhhhcCCC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG--AEM-QW--------K----EE-REVHVAGG 244 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~--~~~-~~--------~----~~-~~~~~~~~ 244 (349)
|++||+|+++++++++.|+++. |+||+|+||+++|++.......... ... .+ . .. ........
T Consensus 160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (324)
T 3u9l_A 160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDA 239 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCC
Confidence 9999999999999999999988 9999999999998764321111000 000 00 0 00 01112236
Q ss_pred CHHHHHHHHHHHHhcC
Q 039397 245 PVEDFARLIVSGACRG 260 (349)
Q Consensus 245 ~~edvA~~i~~l~~~~ 260 (349)
+|+++|+++++++...
T Consensus 240 ~p~~vA~aiv~~~~~~ 255 (324)
T 3u9l_A 240 DVSLVADAIVRVVGTA 255 (324)
T ss_dssp CTHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHhcCC
Confidence 8999999999999876
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=279.66 Aligned_cols=218 Identities=16% Similarity=0.134 Sum_probs=181.2
Q ss_pred CCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCcchh-hhHHHHhc-CCCCeEEEEEec--------------
Q 039397 43 ENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRENRL-QGSTIDEY-NPINEVTLVSLN-------------- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~~~l-~~~~~~~~-~~~~~~~~~~~d-------------- 104 (349)
++++||+++||||+ +|||+++|++|+++|++|++++|+.++. ++..+++. ..+.++..+.+|
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 47899999999999 9999999999999999999999987655 44444442 224567788888
Q ss_pred cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCC--CCchh
Q 039397 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPL--PRMSL 181 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~--~~~~~ 181 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+. ++...
T Consensus 96 ~~~~g~id~li~nAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~ 174 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATADSGILDG-SVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTS 174 (267)
T ss_dssp HHHTSCCSEEEECCCCCCCSCTTTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHH
T ss_pred HHHcCCCCEEEECCCcCCCCCcccC-CHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCc
Confidence 3557899999999999888877776 568999999999999999999999999764 4899999999998776 57899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
|++||+|+++|+++++.|++++|+||+|+||+++|++.+... ...........+.++..+|||+|+++++++++..
T Consensus 175 Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~ 250 (267)
T 3gdg_A 175 YNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP----KETQQLWHSMIPMGRDGLAKELKGAYVYFASDAS 250 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC----HHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTC
T ss_pred chHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC----HHHHHHHHhcCCCCCCcCHHHHHhHhheeecCcc
Confidence 999999999999999999987799999999999999876431 1111222334466778899999999999999877
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
.+++
T Consensus 251 ~~it 254 (267)
T 3gdg_A 251 TYTT 254 (267)
T ss_dssp TTCC
T ss_pred cccc
Confidence 6654
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-37 Score=274.93 Aligned_cols=212 Identities=19% Similarity=0.191 Sum_probs=160.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++|++|+++||||++|||++++++|+++|++|++++|+.+. + .. .+..+.+| .+++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~-------~~--~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-E-------QY--PFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-S-------CC--SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-h-------cC--CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36889999999999999999999999999999999998652 1 11 15566677 3456
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+
T Consensus 73 g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (250)
T 2fwm_X 73 ERLDALVNAAGILRMGATDQL-SKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA 151 (250)
T ss_dssp SCCCEEEECCCCCCCCCTTTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccC-CHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence 899999999999877777776 468999999999999999999999999764 599999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHH------HHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKE------EREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++++++++++.|++++ |+||+|+||+++|++..............+.. ...+..+..+|||+|+++++++++.
T Consensus 152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 231 (250)
T 2fwm_X 152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL 231 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9999999999999987 99999999999999875421111000000111 0234567889999999999999986
Q ss_pred CceEE
Q 039397 261 DTYVK 265 (349)
Q Consensus 261 ~~~i~ 265 (349)
..+++
T Consensus 232 ~~~~t 236 (250)
T 2fwm_X 232 ASHIT 236 (250)
T ss_dssp GTTCC
T ss_pred ccCCC
Confidence 55543
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=279.06 Aligned_cols=219 Identities=16% Similarity=0.093 Sum_probs=173.6
Q ss_pred CCCCCCCCEEEEeCC--CchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEec-------------
Q 039397 41 YSENMEDKVVIITGA--SSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLN------------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGa--s~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d------------- 104 (349)
|+.++++|+++|||| ++|||+++|++|+++|++|++++|+.++ ++++.+++ ..++..+.+|
T Consensus 1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 77 (269)
T 2h7i_A 1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGR 77 (269)
T ss_dssp -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHH
T ss_pred CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHH
Confidence 345689999999999 9999999999999999999999998765 34443332 2346677788
Q ss_pred -cccCC---CcceeeecCcCCC-----CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC
Q 039397 105 -NKESK---AVDHLVNTASLGH-----TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP 175 (349)
Q Consensus 105 -~~~~g---~iDvlVnnAg~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~ 175 (349)
.+++| ++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|+|++ +|+||++||..+ .+
T Consensus 78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~iss~~~-~~ 154 (269)
T 2h7i_A 78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDA-PYADVSKGIHISAYSYASMAKALLPIMNP-GGSIVGMDFDPS-RA 154 (269)
T ss_dssp HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEEECCCS-SC
T ss_pred HHHHhCCCCCceEEEECCccCccccccccccccC-CHHHHHHHHHHhhHHHHHHHHHHHHhhcc-CCeEEEEcCccc-cc
Confidence 23456 9999999999876 3566665 56899999999999999999999999965 489999999877 67
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc--ccchh------hhhHHHHhhhc-CCCC
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML--EDGAE------MQWKEEREVHV-AGGP 245 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~--~~~~~------~~~~~~~~~~~-~~~~ 245 (349)
.+....|++||+|+++|+++++.|++++ |+||+|+||+++|++....... .+... ........+.+ +..+
T Consensus 155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~ 234 (269)
T 2h7i_A 155 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKD 234 (269)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTC
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCC
Confidence 8889999999999999999999999988 9999999999999976432100 00000 00011223555 5889
Q ss_pred HHHHHHHHHHHHhcCCceEE
Q 039397 246 VEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 246 ~edvA~~i~~l~~~~~~~i~ 265 (349)
|||+|+++++++++...+++
T Consensus 235 p~dvA~~v~~L~s~~~~~it 254 (269)
T 2h7i_A 235 ATPVAKTVCALLSDWLPATT 254 (269)
T ss_dssp CHHHHHHHHHHHSSSCTTCC
T ss_pred HHHHHHHHHHHhCchhccCc
Confidence 99999999999998777654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=311.38 Aligned_cols=207 Identities=22% Similarity=0.199 Sum_probs=170.5
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc---------chhhhHHHHhcCCCCeEEEEEec--------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE---------NRLQGSTIDEYNPINEVTLVSLN-------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~---------~~l~~~~~~~~~~~~~~~~~~~d-------- 104 (349)
.++++||+++||||++|||+++|++|+++|++|++++|+. ++++++.+++...+........|
T Consensus 3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v 82 (604)
T 2et6_A 3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIV 82 (604)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHH
Confidence 3578999999999999999999999999999999998765 56666666663333333333333
Q ss_pred ---cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCch
Q 039397 105 ---NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 ---~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~ 180 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++|+++|+|++++ |+|||+||.++..+.++.+
T Consensus 83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~ 161 (604)
T 2et6_A 83 ETAVKNFGTVHVIINNAGILRDASMKKM-TEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQA 161 (604)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCch
Confidence 3567999999999999887788876 4689999999999999999999999997654 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+.+|+++|+.|++++ |+||+|+|| ++|+|...... . . .....+|||+|..+++++++
T Consensus 162 ~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~---~------~----~~~~~~pe~vA~~v~~L~s~ 227 (604)
T 2et6_A 162 NYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP---P------P----MLEKLGPEKVAPLVLYLSSA 227 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC---H------H----HHTTCSHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC---h------h----hhccCCHHHHHHHHHHHhCC
Confidence 99999999999999999999988 999999998 68887543210 0 0 11346899999999999998
Q ss_pred CCceE
Q 039397 260 GDTYV 264 (349)
Q Consensus 260 ~~~~i 264 (349)
. .++
T Consensus 228 ~-~~i 231 (604)
T 2et6_A 228 E-NEL 231 (604)
T ss_dssp S-CCC
T ss_pred c-ccC
Confidence 6 544
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=279.30 Aligned_cols=217 Identities=20% Similarity=0.214 Sum_probs=172.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
.++|+++||||++|||+++|++|+++|++|+++ +|+.+.+++...++.....++..+.+| .+.+|
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999999887 777777777777665556678889998 34557
Q ss_pred CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc----CCCeEEEEeccccccCCC-CchhhH
Q 039397 110 AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE----SNGRVVVNASVENWLPLP-RMSLYA 183 (349)
Q Consensus 110 ~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~----~~g~IV~isS~~~~~~~~-~~~~Y~ 183 (349)
++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|.|++ ++|+||++||.++..+.+ ....|+
T Consensus 104 ~id~li~nAg~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~ 182 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEM-SVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA 182 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred CCCEEEECCCCCCCCCChhhC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence 99999999999765 556665 56899999999999999999999999976 358999999999988776 678899
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++|+++++.|++++ |+|++|+||+++|++........ .........+..+..+|||+|+++++++++...
T Consensus 183 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~ 259 (272)
T 4e3z_A 183 ASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPD---RAREMAPSVPMQRAGMPEEVADAILYLLSPSAS 259 (272)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------------CCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChH---HHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccc
Confidence 99999999999999999988 99999999999999876421111 111112233556788899999999999987765
Q ss_pred eEE
Q 039397 263 YVK 265 (349)
Q Consensus 263 ~i~ 265 (349)
+++
T Consensus 260 ~~t 262 (272)
T 4e3z_A 260 YVT 262 (272)
T ss_dssp TCC
T ss_pred ccc
Confidence 543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=275.65 Aligned_cols=215 Identities=25% Similarity=0.222 Sum_probs=175.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
++++|+++||||+||||+++|++|+++|++|++++|+.+++++...+. ...+..+.+| .+.+|
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 78 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYG 78 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999999998888766554 3467788888 23457
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||..+..+.++...|++||+|
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 157 (281)
T 3m1a_A 79 RVDVLVNNAGRTQVGAFEET-TERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAA 157 (281)
T ss_dssp CCSEEEECCCCEEECCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHH
Confidence 89999999999877777776 4689999999999999999999999997654 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc---ccchhhh-h-----HHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML---EDGAEMQ-W-----KEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~---~~~~~~~-~-----~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+++++++++.|++++ |+||+++||+++|++....... ....... . .....+..+..+|+|+|++++++++
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~ 237 (281)
T 3m1a_A 158 LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALD 237 (281)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHh
Confidence 999999999999988 9999999999999987643211 0000000 0 0111234567899999999999999
Q ss_pred cCCc
Q 039397 259 RGDT 262 (349)
Q Consensus 259 ~~~~ 262 (349)
++..
T Consensus 238 ~~~~ 241 (281)
T 3m1a_A 238 TEKT 241 (281)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 8764
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=276.33 Aligned_cols=209 Identities=13% Similarity=0.196 Sum_probs=171.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHH-cCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec------------cccCCCc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAK-RKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN------------NKESKAV 111 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~-~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------------~~~~g~i 111 (349)
.++|++|||||++|||+++|++|++ .|++|++++|+++... ..+..+.+| ..+++++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~i 71 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA----------ENLKFIKADLTKQQDITNVLDIIKNVSF 71 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC----------TTEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc----------ccceEEecCcCCHHHHHHHHHHHHhCCC
Confidence 3679999999999999999999999 8999999999865211 234566666 1226799
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ |+||++||..+..+.++...|++||+|+++
T Consensus 72 d~lv~nAg~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~ 149 (244)
T 4e4y_A 72 DGIFLNAGILIKGSIFDI-DIESIKKVLDLNVWSSIYFIKGLENNLKVG-ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQ 149 (244)
T ss_dssp EEEEECCCCCCCBCTTTS-CHHHHHHHHHHHTHHHHHHHHHTGGGEEEE-EEEEEECCGGGTCCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCccCCCCCcccC-CHHHHHHHHHHccHHHHHHHHHHHHHhccC-cEEEEECCHHHccCCCCCchhHHHHHHHHH
Confidence 999999999888888776 569999999999999999999999999764 899999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc-------hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG-------AEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|+++++.|++++ |+||+|+||+++|++.+........ ..........+..+..+|||+|+++++++++...+
T Consensus 150 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~ 229 (244)
T 4e4y_A 150 MTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKF 229 (244)
T ss_dssp HHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCcccc
Confidence 999999999988 9999999999999987543211000 01111122345667889999999999999987666
Q ss_pred EE
Q 039397 264 VK 265 (349)
Q Consensus 264 i~ 265 (349)
++
T Consensus 230 it 231 (244)
T 4e4y_A 230 MT 231 (244)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=277.28 Aligned_cols=209 Identities=20% Similarity=0.277 Sum_probs=171.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|++|++|||||++|||+++|++|+++|++|++++|+.++ ..++..+.+| .+.+|
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 73 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEYG 73 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999998764 1245566777 23467
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++...|++||+|
T Consensus 74 ~iD~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 152 (264)
T 2dtx_A 74 SISVLVNNAGIESYGKIESM-SMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHA 152 (264)
T ss_dssp CCCEEEECCCCCCCBCTTTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHH
Confidence 99999999999877777776 4689999999999999999999999997654 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccc----cccc---hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 189 LVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFM----LEDG---AEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 189 l~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+++|+++++.|+++.|+||+|+||+++|++...... ..+. ..........+..+..+|||+|+++++++++..
T Consensus 153 ~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~ 232 (264)
T 2dtx_A 153 VIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREA 232 (264)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 999999999999877999999999999998643210 0000 011111122345678999999999999998765
Q ss_pred ceE
Q 039397 262 TYV 264 (349)
Q Consensus 262 ~~i 264 (349)
.++
T Consensus 233 ~~~ 235 (264)
T 2dtx_A 233 SFI 235 (264)
T ss_dssp TTC
T ss_pred cCC
Confidence 443
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=275.86 Aligned_cols=207 Identities=20% Similarity=0.268 Sum_probs=163.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
..+|++|+++||||++|||++++++|+++|++|++++|++++++++. .+.+| .+.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~D~~~~~~~~~~~~~~~~~ 78 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----------GVEVDVTDSDAVDRAFTAVEEH 78 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----------EEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc-----------CeeccCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999987655321 14555 344
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...|++||
T Consensus 79 ~g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 157 (247)
T 1uzm_A 79 QGPVEVLVSNAGLSADAFLMRM-TEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK 157 (247)
T ss_dssp HSSCSEEEEECSCCC-----CC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHH
Confidence 6899999999999877777765 5689999999999999999999999997654 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+|+++++++++.|++++ |+||+|+||+++|++..... +. .........+..+..+|||+|+.+++++++...++
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~-~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~ 232 (247)
T 1uzm_A 158 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD---ER-IQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYI 232 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC---HH-HHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC---HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence 99999999999999988 99999999999999864321 10 11111112345678899999999999998765544
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-37 Score=306.20 Aligned_cols=203 Identities=20% Similarity=0.202 Sum_probs=168.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc------------ccCCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN------------KESKA 110 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~------------~~~g~ 110 (349)
++++||+++||||++|||+++|++|+++|++|++++|+. ++++.+++...+.....+.+|. +++|+
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~ 395 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGT 395 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999998742 3444445533344566666663 45789
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+|+||||||+....++.+. +.++|++++++|+.|+++++|+++|+|+++ +|+||++||.++..+.+++..|++||+|+
T Consensus 396 iDiLVnNAGi~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal 474 (604)
T 2et6_A 396 IDILVNNAGILRDRSFAKM-SKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGI 474 (604)
T ss_dssp CCEEEECCCCCCCBCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHH
Confidence 9999999999887788776 468999999999999999999999999765 49999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
.+|+++|+.|++++ |+||+|+||. +|+|....... ......+|||+|+.+++++++...
T Consensus 475 ~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~-------------~~~~~~~pe~vA~~v~~L~s~~~~ 534 (604)
T 2et6_A 475 LGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE-------------QDKNLYHADQVAPLLVYLGTDDVP 534 (604)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------CCSSCGGGTHHHHHHTTSTTCC
T ss_pred HHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch-------------hhccCCCHHHHHHHHHHHhCCccC
Confidence 99999999999988 9999999996 99987542110 012456899999999999988655
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=273.92 Aligned_cols=211 Identities=14% Similarity=0.146 Sum_probs=175.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------cccC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------NKES 108 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------~~~~ 108 (349)
.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ ...+.++.+| .+++
T Consensus 25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (281)
T 3ppi_A 25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQL 101 (281)
T ss_dssp CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTS
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999988887776 3467888888 3456
Q ss_pred CCcceeeec-CcCCCCcccc----ccCCcchHHHHHHhHhhhhHHHHHHhcccccc-------CCCeEEEEeccccccCC
Q 039397 109 KAVDHLVNT-ASLGHTFFFE----EVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-------SNGRVVVNASVENWLPL 176 (349)
Q Consensus 109 g~iDvlVnn-Ag~~~~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~~g~IV~isS~~~~~~~ 176 (349)
+++|++||| ||+.....+. +..+.++|++++++|+.|+++++++++|.|.+ ++|+||++||.++..+.
T Consensus 102 ~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 181 (281)
T 3ppi_A 102 GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ 181 (281)
T ss_dssp SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC
T ss_pred CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC
Confidence 899999999 6665554442 12345789999999999999999999999865 35899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhh-cCCCCHHHHHHHHH
Q 039397 177 PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVH-VAGGPVEDFARLIV 254 (349)
Q Consensus 177 ~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edvA~~i~ 254 (349)
++...|++||+|+++|+++++.|++++ |+||+|+||+++|++...... . .........+. .+..+|||+|++++
T Consensus 182 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~-~~~~~~~~~~~~~~~~~pedvA~~v~ 257 (281)
T 3ppi_A 182 IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGE---E-ALAKFAANIPFPKRLGTPDEFADAAA 257 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCH---H-HHHHHHHTCCSSSSCBCHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccH---H-HHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999988 999999999999998765321 1 11111122233 67889999999999
Q ss_pred HHHhc
Q 039397 255 SGACR 259 (349)
Q Consensus 255 ~l~~~ 259 (349)
+++++
T Consensus 258 ~l~s~ 262 (281)
T 3ppi_A 258 FLLTN 262 (281)
T ss_dssp HHHHC
T ss_pred HHHcC
Confidence 99986
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-37 Score=275.11 Aligned_cols=210 Identities=13% Similarity=0.093 Sum_probs=168.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVnnA 118 (349)
|+++||||++|||+++|++|+++|++|++++|+.+++++..+ +...+.++..+..+ .+.+|++|+|||||
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nA 80 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND 80 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 689999999999999999999999999999999887766544 42112222222111 34568999999999
Q ss_pred cCC-CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHH
Q 039397 119 SLG-HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESL 196 (349)
Q Consensus 119 g~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~l 196 (349)
|+. ...++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||+|+++|++++
T Consensus 81 g~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l 159 (254)
T 1zmt_A 81 IFAPEFQPIDKY-AVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANAL 159 (254)
T ss_dssp CCCCCCCCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHH
Confidence 997 66677775 568999999999999999999999999754 489999999999999999999999999999999999
Q ss_pred HHHhcCC-eeEEEEecCcc---------cCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 197 RFELNDE-VGITIATHGWI---------GIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 197 a~el~~~-I~v~~v~PG~v---------~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+.|++++ |+||+|+||++ +|++.... +. .........+..+..+|||+|+++++++++...++
T Consensus 160 a~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~----~~-~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~ 232 (254)
T 1zmt_A 160 SKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN----PE-HVAHVKKVTALQRLGTQKELGELVAFLASGSCDYL 232 (254)
T ss_dssp HHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC----HH-HHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGG
T ss_pred HHHhhhcCcEEEEEecCccccccccccCCCcccccC----hH-HHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence 9999988 99999999999 66654321 00 11111222355678899999999999999865543
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=283.98 Aligned_cols=219 Identities=13% Similarity=0.097 Sum_probs=171.0
Q ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCc---------chhhhHHHHhcC---CCCeEEEEEecc------
Q 039397 46 EDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRE---------NRLQGSTIDEYN---PINEVTLVSLNN------ 105 (349)
Q Consensus 46 ~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~---------~~l~~~~~~~~~---~~~~~~~~~~d~------ 105 (349)
++|+++||||++ |||+++|++|+++|++|++++|++ ++++........ .......+.+|.
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 479999999986 999999999999999999776554 333333333221 112345555552
Q ss_pred ----------------------------ccCCCcceeeecCcCC--CCccccccCCcchHHHHHHhHhhhhHHHHHHhcc
Q 039397 106 ----------------------------KESKAVDHLVNTASLG--HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155 (349)
Q Consensus 106 ----------------------------~~~g~iDvlVnnAg~~--~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 155 (349)
+.+|++|+||||||+. ...++.+. +.++|++++++|+.|+++++++++|
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~p 159 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNT-SRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 2347899999999985 35667776 5689999999999999999999999
Q ss_pred ccccCCCeEEEEeccccccCCCCch-hhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcccCCCCCCcccccc-----
Q 039397 156 YLHESNGRVVVNASVENWLPLPRMS-LYASAKAALVTFYESLRFELND-E-VGITIATHGWIGIEMTKGKFMLED----- 227 (349)
Q Consensus 156 ~m~~~~g~IV~isS~~~~~~~~~~~-~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v~T~~~~~~~~~~~----- 227 (349)
+|+++ |+||++||.++..+.++.. .|++||+|+++|+++|+.|+++ + |+||+|+||+|+|+|.+......+
T Consensus 160 ~m~~~-g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~ 238 (329)
T 3lt0_A 160 IMKPQ-SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN 238 (329)
T ss_dssp GEEEE-EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC---------
T ss_pred HHhhC-CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccc
Confidence 99875 9999999999999999996 9999999999999999999988 6 999999999999999765421100
Q ss_pred -------------------ch-----------------hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 228 -------------------GA-----------------EMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 228 -------------------~~-----------------~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+. .........+.++..+|||+|+++++++++...+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG 313 (329)
T 3lt0_A 239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITG 313 (329)
T ss_dssp ---------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred ccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccC
Confidence 00 0111223446678999999999999999987776653
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=267.02 Aligned_cols=215 Identities=19% Similarity=0.168 Sum_probs=176.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKA 110 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~ 110 (349)
|++++++|+++||||++|||++++++|+++|++|++++|+.+++++...++. ....+.+| .+.+++
T Consensus 1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~ 76 (244)
T 3d3w_A 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALGSVGP 76 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCC
T ss_pred CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999999999887776655442 23455777 235678
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
+|++|||||+....++.+. +.++|++++++|+.++++++++++|.|+++ .|+||++||..+..+.++...|++||++
T Consensus 77 id~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 155 (244)
T 3d3w_A 77 VDLLVNNAAVALLQPFLEV-TKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGA 155 (244)
T ss_dssp CCEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCEEEECCccCCCcchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHH
Confidence 9999999999877777775 458899999999999999999999999754 5899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+++++++++.|++++ |++++++||++.|++....... +. .........+..+..+|||+|+++++++++...
T Consensus 156 ~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 228 (244)
T 3d3w_A 156 LDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-PH-KAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG 228 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-TT-HHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC-hH-HHHHHHhhCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 999999999999887 9999999999999986532111 11 111112223456788999999999999986543
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=271.82 Aligned_cols=219 Identities=24% Similarity=0.288 Sum_probs=179.1
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
|..++++|+++||||++|||++++++|+++|++|++++| +.+++++..+++...+..+..+.+| .
T Consensus 1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999999 7777776666664344567888888 2
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||..+..+.++...|+
T Consensus 81 ~~~g~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 159 (261)
T 1gee_A 81 KEFGKLDVMINNAGLENPVSSHEM-SLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA 159 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHH
Confidence 335789999999999877777665 468899999999999999999999999765 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|++.++++++.|++++ |+|++++||+++|++....... +. .........+..+..+|||+|+++++++++...
T Consensus 160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 237 (261)
T 1gee_A 160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD-PE-QRADVESMIPMGYIGEPEEIAAVAAWLASSEAS 237 (261)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS-HH-HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC-hh-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 99999999999999999887 9999999999999986532110 00 011111122445788999999999999986433
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=263.63 Aligned_cols=207 Identities=21% Similarity=0.207 Sum_probs=179.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-------NLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------- 104 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------- 104 (349)
++|+++||||+||||++++++|+++|+ +|++++|+.++++++..++...+..+..+.+|
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 368999999999999999999999999 99999999988887777775555678888888
Q ss_pred cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhH
Q 039397 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|+
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 159 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGVGRFGALSDL-TEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC 159 (244)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred HHhCCCCCEEEEcCCcCCcCccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhH
Confidence 2346799999999999877777775 468999999999999999999999999654 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+++++++++++.|++++ |++++++||+++|++...... . . ..+..+|||+|+.++++++++..
T Consensus 160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~-~---------~~~~~~~~dva~~~~~l~~~~~~ 226 (244)
T 2bd0_A 160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---E-M---------QALMMMPEDIAAPVVQAYLQPSR 226 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---T-T---------GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc---c-c---------cccCCCHHHHHHHHHHHHhCCcc
Confidence 99999999999999999988 999999999999998764311 0 0 12678999999999999999888
Q ss_pred eEEc
Q 039397 263 YVKF 266 (349)
Q Consensus 263 ~i~~ 266 (349)
+++.
T Consensus 227 ~~~g 230 (244)
T 2bd0_A 227 TVVE 230 (244)
T ss_dssp EEEE
T ss_pred ccch
Confidence 7653
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=268.17 Aligned_cols=207 Identities=18% Similarity=0.172 Sum_probs=168.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------------ccCCCcce
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------------KESKAVDH 113 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------------~~~g~iDv 113 (349)
+|+++||||++|||++++++|+++|++|++++|+.++. .+++ + +..+.+|. +.++++|+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~g~id~ 73 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL---G--AVPLPTDLEKDDPKGLVKRALEALGGLHV 73 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH---T--CEEEECCTTTSCHHHHHHHHHHHHTSCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh---C--cEEEecCCchHHHHHHHHHHHHHcCCCCE
Confidence 68999999999999999999999999999999998762 2233 1 45566662 24578999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCC--CCchhhHHHHHHHH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPL--PRMSLYASAKAALV 190 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~--~~~~~Y~asKaal~ 190 (349)
||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+. ++...|++||+|++
T Consensus 74 lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~ 152 (239)
T 2ekp_A 74 LVHAAAVNVRKPALEL-SYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALL 152 (239)
T ss_dssp EEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHH
Confidence 9999999877777775 468999999999999999999999999765 4899999999999887 88999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+++++++.|++++ |+||+|+||+++|++...... .+. .........+.++..+|||+|+.+++++++...++
T Consensus 153 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~-~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~ 225 (239)
T 2ekp_A 153 GLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ-NPE-LYEPITARIPMGRWARPEEIARVAAVLCGDEAEYL 225 (239)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-CHH-HHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc-CHH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCC
Confidence 9999999999988 999999999999998643210 010 11111122345678899999999999998765544
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=268.56 Aligned_cols=210 Identities=24% Similarity=0.298 Sum_probs=169.8
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------ccCCCcc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------KESKAVD 112 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------~~~g~iD 112 (349)
+..+++||+++||||++|||+++|++|+++|++|++++|+++.++ ++ + ....+ +|. +...++|
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~~~~~~~~~~~~~~iD 83 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDLRKDLDLLFEKVKEVD 83 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCTTTCHHHHHHHSCCCS
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeHHHHHHHHHHHhcCCC
Confidence 345789999999999999999999999999999999999874332 22 1 34455 663 2233899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++...|++||+|+++
T Consensus 84 ~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 162 (249)
T 1o5i_A 84 ILVLNAGGPKAGFFDEL-TNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTG 162 (249)
T ss_dssp EEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHH
Confidence 99999999877777776 4689999999999999999999999997654 899999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhh-hHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQ-WKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
++++++.|++++ |+||+|+||+++|++..... +. ... ......+..+..+|||+|+++++++++...++
T Consensus 163 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~-~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~ 233 (249)
T 1o5i_A 163 FLKTLSFEVAPYGITVNCVAPGWTETERVKELL---SE-EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYL 233 (249)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS---CH-HHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHhhhcCeEEEEEeeCCCccCcccccc---hh-hHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence 999999999988 99999999999999864311 11 111 11122345678899999999999998754443
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-36 Score=270.57 Aligned_cols=217 Identities=17% Similarity=0.151 Sum_probs=174.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCC-------CeEEEEEec---------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI-------NEVTLVSLN--------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~-------~~~~~~~~d--------- 104 (349)
|+.+|++|+++||||+||||++++++|+++|++|++++|+.+++++...++...+ .++..+.+|
T Consensus 1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 80 (264)
T 2pd6_A 1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC 80 (264)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence 4567899999999999999999999999999999999999888777665553222 456778888
Q ss_pred -----cccCCCc-ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCC
Q 039397 105 -----NKESKAV-DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPL 176 (349)
Q Consensus 105 -----~~~~g~i-DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~ 176 (349)
.+.+|++ |+||||||.....++.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||..+..+.
T Consensus 81 ~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 159 (264)
T 2pd6_A 81 LLEQVQACFSRPPSVVVSCAGITQDEFLLHM-SEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN 159 (264)
T ss_dssp HHHHHHHHHSSCCSEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC
T ss_pred HHHHHHHHhCCCCeEEEECCCcCCCcchhhC-CHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC
Confidence 2345778 999999999877777775 468999999999999999999999999764 4899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHH
Q 039397 177 PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 177 ~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~ 255 (349)
++...|++||+|+++++++++.|++++ |++++++||++.|++....... .........+..+..+|+|+|+++++
T Consensus 160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~dva~~~~~ 235 (264)
T 2pd6_A 160 VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQK----VVDKITEMIPMGHLGDPEDVADVVAF 235 (264)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------CTGGGCTTCSCBCHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHH----HHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999887 9999999999999986542110 00001112344567899999999999
Q ss_pred HHhcCCc
Q 039397 256 GACRGDT 262 (349)
Q Consensus 256 l~~~~~~ 262 (349)
++++...
T Consensus 236 l~~~~~~ 242 (264)
T 2pd6_A 236 LASEDSG 242 (264)
T ss_dssp HHSGGGT
T ss_pred HcCCccc
Confidence 9986543
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=285.16 Aligned_cols=210 Identities=12% Similarity=-0.040 Sum_probs=170.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cCCeEEEEecCcchhhh------------HHHHhcCCCCeEEEEEec--------
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAK-RKANLVLVARRENRLQG------------STIDEYNPINEVTLVSLN-------- 104 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~-~G~~Vv~~~r~~~~l~~------------~~~~~~~~~~~~~~~~~d-------- 104 (349)
.+|++||||||+|||+++|+.|++ +|++|++++|+.+.+++ +.+.+...+..+..+.+|
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 589999999999999999999999 99999999998776543 223343345567888888
Q ss_pred ------cccC-CCcceeeecCcCC-------------CCcccc---------------------ccCCcchHHHHHHhHh
Q 039397 105 ------NKES-KAVDHLVNTASLG-------------HTFFFE---------------------EVTDTSIFPRLLDINF 143 (349)
Q Consensus 105 ------~~~~-g~iDvlVnnAg~~-------------~~~~~~---------------------~~~~~~~~~~~~~vN~ 143 (349)
.+++ |++|+||||||+. ...++. +. +.++|++++++|.
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~-t~e~~~~~v~Vn~ 218 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPA-SAQEIEDTITVMG 218 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCC-CHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCC-CHHHHHHHHHhhc
Confidence 4567 9999999999973 223331 33 4589999999999
Q ss_pred hhhH-HHHHHhcc-ccccCCCeEEEEeccccccCCCCc--hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCC
Q 039397 144 WGNV-YPTFVALP-YLHESNGRVVVNASVENWLPLPRM--SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEM 218 (349)
Q Consensus 144 ~g~~-~l~~~~lp-~m~~~~g~IV~isS~~~~~~~~~~--~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~ 218 (349)
.+.+ .+++++++ .|++++|+||++||+++..+.|.. ++|++||+|+++|+++|+.|++++ ||||+|+||+++|++
T Consensus 219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~ 298 (422)
T 3s8m_A 219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA 298 (422)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence 9987 78887764 566667999999999999988876 999999999999999999999999 999999999999999
Q ss_pred CCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 219 TKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
....... .........++++..+|||||+++.+|+++.
T Consensus 299 ~~~ip~~----~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 299 SAAIPVM----PLYISMVYKIMKEKGLHEGTIEQLDRLFRER 336 (422)
T ss_dssp GGGSTHH----HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred hhcCCCC----hHHHHHHHhhhcCCcChHHHHHHHHHHhcch
Confidence 8654211 1111222346788999999999999999875
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=274.92 Aligned_cols=247 Identities=23% Similarity=0.239 Sum_probs=182.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc------CCCCeEEEEEecc------------cc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY------NPINEVTLVSLNN------------KE 107 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~------~~~~~~~~~~~d~------------~~ 107 (349)
++|+++||||++|||+++|++|+++|++|++++|+.+++++....+. .....+..+.+|. -.
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 47899999999999999999999999999999988766654443321 2234678888881 12
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
.|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK 159 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEAL-GEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK 159 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHH
Confidence 4789999999999877777776 468999999999999999999999999754 59999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccccc-------chhhh-hHHH----HhhhcC-CCCHHHHHHH
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLED-------GAEMQ-WKEE----REVHVA-GGPVEDFARL 252 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~-------~~~~~-~~~~----~~~~~~-~~~~edvA~~ 252 (349)
+|+++|+++++.|++++ |+||+|+||+++|++......... ..... +... ..+..+ ..+|||+|+.
T Consensus 160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~ 239 (327)
T 1jtv_A 160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV 239 (327)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Confidence 99999999999999987 999999999999999765321110 00000 0000 011223 3689999999
Q ss_pred HHHHHhcC---CceEEcCchHHHHHHHHHhchH---HHHHHHHHhccc
Q 039397 253 IVSGACRG---DTYVKFPSWYDVFLLYRVFAPH---VLNWTFRLLISS 294 (349)
Q Consensus 253 i~~l~~~~---~~~i~~p~~~~~~~~~~~~~P~---~~~~~~~~l~~~ 294 (349)
++++++++ .+|++...+.. ...++...|. +.++..+.+...
T Consensus 240 i~~l~~~~~~~~~~~tg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
T 1jtv_A 240 FLTALRAPKPTLRYFTTERFLP-LLRMRLDDPSGSNYVTAMHREVFGD 286 (327)
T ss_dssp HHHHHHCSSCCSEEESCSTTHH-HHHHHHHCTTSHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCCCeEEEeCchHHH-HHHHHhcCcchHHHHHHHHHHhcCC
Confidence 99999864 35666554332 3334444453 456666665443
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=266.26 Aligned_cols=216 Identities=20% Similarity=0.302 Sum_probs=178.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+|++|+++||||+||||++++++|+++|++|++++|+.+++++...++... ..+..+.+| .+.+
T Consensus 2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4688999999999999999999999999999999999988887776666433 467888888 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++ ++||++||..+..+.++...|++||
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 159 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEET-TTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK 159 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence 789999999999877777665 4689999999999999999999999997654 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc--CC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 187 AALVTFYESLRFELN--DE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 187 aal~~l~~~la~el~--~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+++++++++++.|++ +. |++++++||+++|++..... ............+.++..+|+|+|+++++++++...+
T Consensus 160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 236 (251)
T 1zk4_A 160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP---GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKF 236 (251)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST---THHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC---chhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCccccc
Confidence 999999999999987 66 99999999999999875421 0000000111224456889999999999999875443
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=271.85 Aligned_cols=218 Identities=19% Similarity=0.163 Sum_probs=155.9
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~ 107 (349)
.+++++|+++||||++|||++++++|+++|++|++++|+++++++...++...+..+..+.+|. +.
T Consensus 9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 88 (266)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence 3468899999999999999999999999999999999998888777666643345677888882 12
Q ss_pred C-CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 108 S-KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 108 ~-g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
+ +++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++|
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 167 (266)
T 1xq1_A 89 FGGKLDILINNLGAIRSKPTLDY-TAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT 167 (266)
T ss_dssp HTTCCSEEEEECCC------CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred hCCCCcEEEECCCCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHH
Confidence 2 899999999999877777665 468999999999999999999999999755 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|++++.++++++.|++++ |+|++++||++.|++...... +. .........+..+..+|||+|+++++++++...+
T Consensus 168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 243 (266)
T 1xq1_A 168 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD--DE-FKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASY 243 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC--HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence 999999999999999887 999999999999998764321 10 0111111234456789999999999999865433
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=265.86 Aligned_cols=217 Identities=22% Similarity=0.231 Sum_probs=178.4
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d--------------~ 105 (349)
|..++++|+++||||+||||++++++|+++|++|++++|+.+++++...++.. .+..+..+.+| .
T Consensus 1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (248)
T 2pnf_A 1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIY 80 (248)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999998887776655522 23457778888 2
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
+.++++|+||||||.....++.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||..+..+.++...|++
T Consensus 81 ~~~~~~d~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~ 159 (248)
T 2pnf_A 81 NLVDGIDILVNNAGITRDKLFLRM-SLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYST 159 (248)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCccccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHH
Confidence 345799999999999877776665 4688999999999999999999999997654 89999999999888899999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
||+++++++++++.|++++ |++++++||+++|++..... ...........+..+..+|+|+|+++++++++...
T Consensus 160 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 234 (248)
T 2pnf_A 160 TKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS----EEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELAS 234 (248)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC----HHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc----HHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhh
Confidence 9999999999999999887 99999999999999865321 10111111123445788999999999999987433
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=277.27 Aligned_cols=219 Identities=14% Similarity=0.111 Sum_probs=166.8
Q ss_pred CCCCCCCCEEEEeCCC--chHHHHHHHHHHHcCCeEEEEecCc-----------chhhhHHHHhcCCC--CeEEEEEec-
Q 039397 41 YSENMEDKVVIITGAS--SDIGEQIAYEYAKRKANLVLVARRE-----------NRLQGSTIDEYNPI--NEVTLVSLN- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas--~GIG~ala~~la~~G~~Vv~~~r~~-----------~~l~~~~~~~~~~~--~~~~~~~~d- 104 (349)
|.++|+||+++||||+ +|||+++|++|+++|++|++++|++ +++++. .++.... .......+|
T Consensus 2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 80 (297)
T 1d7o_A 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDA 80 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECT
T ss_pred CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccce
Confidence 4567899999999999 9999999999999999999998753 222222 1221110 001121111
Q ss_pred ---------------------------------cccCCCcceeeecCcCCC--CccccccCCcchHHHHHHhHhhhhHHH
Q 039397 105 ---------------------------------NKESKAVDHLVNTASLGH--TFFFEEVTDTSIFPRLLDINFWGNVYP 149 (349)
Q Consensus 105 ---------------------------------~~~~g~iDvlVnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l 149 (349)
.+++|++|+||||||+.. ..++.+. +.++|++++++|+.|++++
T Consensus 81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l 159 (297)
T 1d7o_A 81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLET-SRKGYLAAISASSYSFVSL 159 (297)
T ss_dssp TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGC-CHHHHHHHHHHHTHHHHHH
T ss_pred eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccC-CHHHHHHHHHHhhhHHHHH
Confidence 234579999999999754 4566665 5689999999999999999
Q ss_pred HHHhccccccCCCeEEEEeccccccCCCCc-hhhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcccCCCCCCccccc
Q 039397 150 TFVALPYLHESNGRVVVNASVENWLPLPRM-SLYASAKAALVTFYESLRFELND-E-VGITIATHGWIGIEMTKGKFMLE 226 (349)
Q Consensus 150 ~~~~lp~m~~~~g~IV~isS~~~~~~~~~~-~~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v~T~~~~~~~~~~ 226 (349)
+++++|+|++ +|+||++||.++..+.++. ..|++||+|+++|+++++.|+++ + |+||+|+||+++|++......
T Consensus 160 ~~~~~~~m~~-~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~-- 236 (297)
T 1d7o_A 160 LSHFLPIMNP-GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF-- 236 (297)
T ss_dssp HHHHGGGEEE-EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH--
T ss_pred HHHHHHHhcc-CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc--
Confidence 9999999975 5899999999999999887 69999999999999999999985 5 999999999999998764210
Q ss_pred cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 227 DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
............+..+..+|||+|+.+++++++...++
T Consensus 237 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~i 274 (297)
T 1d7o_A 237 IDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAI 274 (297)
T ss_dssp HHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTC
T ss_pred cHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCC
Confidence 01011111123355678899999999999998755443
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=270.79 Aligned_cols=216 Identities=22% Similarity=0.213 Sum_probs=177.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.++++|+++||||+||||++++++|+++|++|++++|+++++++..+++...+.++..+.+| .+.+
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999999888887777775545568888888 2345
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++...|++||+
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~ 198 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRM-KNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKA 198 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHH
Confidence 789999999999877777765 4689999999999999999999999997554 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
|+++++++++.|+++. |+|++++||+++|++..... +. .........+..+..+|||+|+++++++++...+
T Consensus 199 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~-~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~ 271 (285)
T 2c07_A 199 GVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---EQ-IKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY 271 (285)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---HH-HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---HH-HHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCC
Confidence 9999999999999887 99999999999999875421 10 1111111234457889999999999999875443
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=266.23 Aligned_cols=218 Identities=17% Similarity=0.173 Sum_probs=177.6
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.+++++|+++||||+||||++++++|+++|++|++++|+.+++++..+++...+.++..+.+| .+.
T Consensus 8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 346889999999999999999999999999999999999888777666664334568888888 233
Q ss_pred CCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCc--hhhH
Q 039397 108 SKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRM--SLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~--~~Y~ 183 (349)
++++|+||||||+.. ..++.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||..+..+.++. ..|+
T Consensus 88 ~~~id~vi~~Ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~ 166 (260)
T 3awd_A 88 EGRVDILVACAGICISEVKAEDM-TDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN 166 (260)
T ss_dssp HSCCCEEEECCCCCCCSCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred cCCCCEEEECCCCCCCCCCcccC-CHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence 578999999999876 5566665 458899999999999999999999999754 5899999999998888877 8999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||++++.++++++.|++++ |++++++||+++|++...... ............+..+..+|||+|+++++++++...
T Consensus 167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 244 (260)
T 3awd_A 167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME--KPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAAS 244 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT--CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC--ChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhc
Confidence 99999999999999999887 999999999999998651111 000111111223456788999999999999986543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=263.82 Aligned_cols=215 Identities=22% Similarity=0.247 Sum_probs=176.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEec--------------cccCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
+|+++||||++|||++++++|+++|++|++++|+.+++++...++ ...+.++..+.+| .+.++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999999999999998888777666 3334567888888 2335789
Q ss_pred ceeeecCcCCCCcc---ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 112 DHLVNTASLGHTFF---FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 112 DvlVnnAg~~~~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|+||||||+....+ +.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||.++..+.++...|++||+
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTT-PVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG 160 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence 99999999876555 5665 4588999999999999999999999997654 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
++++++++++.|++++ |++++++||+++|++...... ............+..+..+|||+|+++++++++...++
T Consensus 161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 236 (250)
T 2cfc_A 161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD--QPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYV 236 (250)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT--SHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTC
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcc
Confidence 9999999999999887 999999999999998653111 01011111122345677899999999999998765543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-35 Score=264.71 Aligned_cols=210 Identities=17% Similarity=0.175 Sum_probs=171.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+++++|+++||||++|||++++++|+++|++|++++|+.+++++...++ ...+..+.+| .+.+
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 4688999999999999999999999999999999999998887776665 2457788888 2345
Q ss_pred CCcceeeecCcCCCCccccc-----cCCcchHHHHHHhHhhhhHHHHHHhccccccC-------CCeEEEEeccccccCC
Q 039397 109 KAVDHLVNTASLGHTFFFEE-----VTDTSIFPRLLDINFWGNVYPTFVALPYLHES-------NGRVVVNASVENWLPL 176 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~-----~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------~g~IV~isS~~~~~~~ 176 (349)
|++|+||||||+....++.+ ..+.++|++++++|+.|+++++++++|+|+++ .|+||++||..+..+.
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 164 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 164 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence 79999999999876665543 12458899999999999999999999999765 4899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhh-cCCCCHHHHHHHHH
Q 039397 177 PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVH-VAGGPVEDFARLIV 254 (349)
Q Consensus 177 ~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edvA~~i~ 254 (349)
++...|++||+|+++++++++.|++++ |+||+|+||+++|++...... . .........+. .+..+|||+|+.++
T Consensus 165 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~dva~~~~ 240 (265)
T 2o23_A 165 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---K-VCNFLASQVPFPSRLGDPAEYAHLVQ 240 (265)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSSSCSCBCHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH---H-HHHHHHHcCCCcCCCCCHHHHHHHHH
Confidence 999999999999999999999999887 999999999999998764211 0 01111112233 57889999999999
Q ss_pred HHHhc
Q 039397 255 SGACR 259 (349)
Q Consensus 255 ~l~~~ 259 (349)
++++.
T Consensus 241 ~l~~~ 245 (265)
T 2o23_A 241 AIIEN 245 (265)
T ss_dssp HHHHC
T ss_pred HHhhc
Confidence 99975
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=265.87 Aligned_cols=217 Identities=19% Similarity=0.187 Sum_probs=176.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeE-EEEEecc-------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEV-TLVSLNN-------------K 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~-~~~~~d~-------------~ 106 (349)
+++++++|+++||||+||||++++++|+++|++|++++|+++++++..+++ +..+ ..+.+|. .
T Consensus 5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (254)
T 2wsb_A 5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE 81 (254)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence 345689999999999999999999999999999999999988887766665 2244 6777881 1
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCc--hhhH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRM--SLYA 183 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~--~~Y~ 183 (349)
+++++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||..+..+.+.. ..|+
T Consensus 82 ~~~~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~ 160 (254)
T 2wsb_A 82 AVAPVSILVNSAGIARLHDALET-DDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYM 160 (254)
T ss_dssp HHSCCCEEEECCCCCCCBCSTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHH
T ss_pred hhCCCcEEEECCccCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHH
Confidence 14789999999999877777765 458899999999999999999999999765 4899999999999888887 8999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+++++++++++.|++++ |++++++||++.|++...... .+. .........+..+..+|||+|+++++++++...
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 238 (254)
T 2wsb_A 161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE-RPE-LFETWLDMTPMGRCGEPSEIAAAALFLASPAAS 238 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT-CHH-HHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc-ChH-HHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccc
Confidence 99999999999999999887 999999999999998653211 000 111111223446788999999999999987543
Q ss_pred e
Q 039397 263 Y 263 (349)
Q Consensus 263 ~ 263 (349)
+
T Consensus 239 ~ 239 (254)
T 2wsb_A 239 Y 239 (254)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-36 Score=266.82 Aligned_cols=214 Identities=19% Similarity=0.199 Sum_probs=156.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++++|+++||||+||||++++++|+++|++|+++ +|+++.+++..+++...+.++..+.+| .+.+
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999 677777776666654344567888888 2335
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||..+..+.++...|++||+
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 160 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKM-SEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKA 160 (247)
T ss_dssp SCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHH
Confidence 789999999999876666665 458899999999999999999999999754 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+++.++++++.|++++ |++|+++||+++|++..... ...........+..+..+|||+|+++++++++...
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 232 (247)
T 2hq1_A 161 GLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP----DKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSN 232 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC----HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc----hHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccc
Confidence 9999999999999887 99999999999999764321 10111111123445788999999999999986533
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-36 Score=276.76 Aligned_cols=223 Identities=16% Similarity=0.063 Sum_probs=167.3
Q ss_pred cCCCCCCCCEEEEeCC--CchHHHHHHHHHHHcCCeEEEEecCc-----------chhhhHHHHhcCCCC--eEEEEEec
Q 039397 40 FYSENMEDKVVIITGA--SSDIGEQIAYEYAKRKANLVLVARRE-----------NRLQGSTIDEYNPIN--EVTLVSLN 104 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGa--s~GIG~ala~~la~~G~~Vv~~~r~~-----------~~l~~~~~~~~~~~~--~~~~~~~d 104 (349)
||+++|+||+++|||| ++|||+++|++|+++|++|++++|++ +++++. .++..... ....+.+|
T Consensus 2 M~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d 80 (315)
T 2o2s_A 2 AFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLD 80 (315)
T ss_dssp --CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECC
T ss_pred CCcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhcccccccccccccc
Confidence 4566799999999999 89999999999999999999999763 122222 12211110 01122111
Q ss_pred ----------------------------------cccCCCcceeeecCcCCC--CccccccCCcchHHHHHHhHhhhhHH
Q 039397 105 ----------------------------------NKESKAVDHLVNTASLGH--TFFFEEVTDTSIFPRLLDINFWGNVY 148 (349)
Q Consensus 105 ----------------------------------~~~~g~iDvlVnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~ 148 (349)
.+.+|++|+||||||+.. ..++.+. +.++|++++++|+.|+++
T Consensus 81 ~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~ 159 (315)
T 2o2s_A 81 AAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLET-SRKGYLAASSNSAYSFVS 159 (315)
T ss_dssp TTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGC-CHHHHHHHHHHHTHHHHH
T ss_pred ccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccC-CHHHHHHHHhhhhHHHHH
Confidence 234589999999999864 4566665 568999999999999999
Q ss_pred HHHHhccccccCCCeEEEEeccccccCCCCc-hhhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcccCCCCCCcccc
Q 039397 149 PTFVALPYLHESNGRVVVNASVENWLPLPRM-SLYASAKAALVTFYESLRFELND-E-VGITIATHGWIGIEMTKGKFML 225 (349)
Q Consensus 149 l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~-~~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v~T~~~~~~~~~ 225 (349)
++++++|+|++ +|+||++||.++..+.++. ..|++||+|+++|+++++.|+++ + |+||+|+||+++|++.......
T Consensus 160 l~~~~~~~m~~-~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~ 238 (315)
T 2o2s_A 160 LLQHFGPIMNE-GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKS 238 (315)
T ss_dssp HHHHHSTTEEE-EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCS
T ss_pred HHHHHHHHHhc-CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccc
Confidence 99999999976 4899999999999998887 58999999999999999999974 5 9999999999999986432111
Q ss_pred ccchh-hh---hHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 226 EDGAE-MQ---WKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 226 ~~~~~-~~---~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
..... .. ......+.++..+|||+|+.+++++++...+++
T Consensus 239 ~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it 282 (315)
T 2o2s_A 239 GEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVS 282 (315)
T ss_dssp SSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCC
T ss_pred ccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCc
Confidence 10000 00 111234567889999999999999997665554
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=267.75 Aligned_cols=197 Identities=14% Similarity=0.090 Sum_probs=163.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC-
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES- 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~- 108 (349)
..++|+++||||++|||++++++|+++|++|++++|++++.+. ....+.+| .+.+
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS----------ASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS----------EEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC----------CcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999999999999999776431 23455666 2233
Q ss_pred -CCcceeeecCcCCCCccc-cccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 -KAVDHLVNTASLGHTFFF-EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 -g~iDvlVnnAg~~~~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|+||||||+....++ .+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...|++||
T Consensus 74 ~g~iD~lv~~Ag~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 151 (241)
T 1dhr_A 74 DQKVDAILCVAGGWAGGNAKSKS-LFKNCDLMWKQSIWTSTISSHLATKHLKE-GGLLTLAGAKAALDGTPGMIGYGMAK 151 (241)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred CCCCCEEEEcccccCCCCCcccC-CHHHHHHHHHHhhHHHHHHHHHHHHhhcc-CCEEEEECCHHHccCCCCchHHHHHH
Confidence 799999999999877666 454 56889999999999999999999999965 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc--CC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 187 AALVTFYESLRFELN--DE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 187 aal~~l~~~la~el~--~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+|+++++++++.|++ ++ |+||+|+||+++|++....... . ......+|||+|+.+++++++...+
T Consensus 152 ~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~--~----------~~~~~~~~~~vA~~v~~l~~~~~~~ 219 (241)
T 1dhr_A 152 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--A----------DFSSWTPLEFLVETFHDWITGNKRP 219 (241)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--S----------CGGGSEEHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc--h----------hhccCCCHHHHHHHHHHHhcCCCcC
Confidence 999999999999998 77 9999999999999986432110 0 0124568899999999999886555
Q ss_pred E
Q 039397 264 V 264 (349)
Q Consensus 264 i 264 (349)
+
T Consensus 220 ~ 220 (241)
T 1dhr_A 220 N 220 (241)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=263.64 Aligned_cols=220 Identities=19% Similarity=0.247 Sum_probs=176.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
..+++++|+++||||++|||++++++|+++|++|++++|+.+..++...++... ..+..+.+| .+
T Consensus 10 ~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 10 STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999988777666666332 267888888 23
Q ss_pred cCCCcceeeecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCC-Cchhh
Q 039397 107 ESKAVDHLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLP-RMSLY 182 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~-~~~~Y 182 (349)
.++++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||..+..+.+ +...|
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y 167 (278)
T 2bgk_A 89 KHGKLDIMFGNVGVLSTTPYSILEA-GNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVY 167 (278)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHH
T ss_pred HcCCCCEEEECCcccCCCCCChhhC-CHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcch
Confidence 35789999999998643 455554 458899999999999999999999999764 48999999999998888 88999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHH-HhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE-REVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++||+++++++++++.|++++ |++++++||++.|++.................. ..+..+..+|||+|+++++++++.
T Consensus 168 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 247 (278)
T 2bgk_A 168 TATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE 247 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcc
Confidence 999999999999999999887 999999999999998765432111100011111 112356889999999999999865
Q ss_pred Cc
Q 039397 261 DT 262 (349)
Q Consensus 261 ~~ 262 (349)
..
T Consensus 248 ~~ 249 (278)
T 2bgk_A 248 SK 249 (278)
T ss_dssp GT
T ss_pred cc
Confidence 33
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-36 Score=277.63 Aligned_cols=224 Identities=16% Similarity=0.112 Sum_probs=140.6
Q ss_pred cCCCCCCCCEEEEeCC--CchHHHHHHHHHHHcCCeEEEEecCc-----------chhhh-----------HHHHhcCCC
Q 039397 40 FYSENMEDKVVIITGA--SSDIGEQIAYEYAKRKANLVLVARRE-----------NRLQG-----------STIDEYNPI 95 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGa--s~GIG~ala~~la~~G~~Vv~~~r~~-----------~~l~~-----------~~~~~~~~~ 95 (349)
+|.++|+||+++|||| ++|||+++|++|+++|++|++++|++ +++++ +.+++...+
T Consensus 2 m~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 2ptg_A 2 PLPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP 81 (319)
T ss_dssp CCCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-----------------------------
T ss_pred CcccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence 4567789999999999 89999999999999999999998752 22221 112221111
Q ss_pred C---eEEEEEec----------------------------------cccCCCcceeeecCcCCC--CccccccCCcchHH
Q 039397 96 N---EVTLVSLN----------------------------------NKESKAVDHLVNTASLGH--TFFFEEVTDTSIFP 136 (349)
Q Consensus 96 ~---~~~~~~~d----------------------------------~~~~g~iDvlVnnAg~~~--~~~~~~~~~~~~~~ 136 (349)
. ....+.+| .+.+|++|+||||||+.. ..++.+. +.++|+
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~-~~~~~~ 160 (319)
T 2ptg_A 82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQT-SRKGYL 160 (319)
T ss_dssp ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGC-CHHHHH
T ss_pred ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccC-CHHHHH
Confidence 0 01222211 234579999999999763 4566665 568999
Q ss_pred HHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCc-hhhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCc
Q 039397 137 RLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRM-SLYASAKAALVTFYESLRFELND-E-VGITIATHGW 213 (349)
Q Consensus 137 ~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~-~~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~ 213 (349)
+++++|+.|+++++++++|+|++ +|+||++||.++..+.++. ..|++||+|+++|+++|+.|+++ + |+||+|+||+
T Consensus 161 ~~~~vN~~g~~~l~~~~~~~m~~-~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~ 239 (319)
T 2ptg_A 161 AAVSSSSYSFVSLLQHFLPLMKE-GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGP 239 (319)
T ss_dssp HHHHHHTHHHHHHHHHHGGGEEE-EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred HHHhHhhHHHHHHHHHHHHHHhc-CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCC
Confidence 99999999999999999999976 4899999999999998887 69999999999999999999985 5 9999999999
Q ss_pred ccCCCCCCccccccchh----hhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 214 IGIEMTKGKFMLEDGAE----MQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 214 v~T~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++|++............ ........+.++..+|||+|+.+++++++...+++
T Consensus 240 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~it 295 (319)
T 2ptg_A 240 LKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVT 295 (319)
T ss_dssp CC-------------------------------CCCHHHHHHHHHHHTSGGGTTCC
T ss_pred ccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCcc
Confidence 99998764321000000 00011223556788999999999999998665543
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-35 Score=268.36 Aligned_cols=221 Identities=17% Similarity=0.166 Sum_probs=177.7
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-----CCCeEEEEEec-----------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-----PINEVTLVSLN----------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-----~~~~~~~~~~d----------- 104 (349)
+..++++|+++||||+||||+++|++|+++|++|++++|+.+++++..+++.. ....+..+.+|
T Consensus 12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 91 (303)
T 1yxm_A 12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV 91 (303)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence 45578999999999999999999999999999999999999888777766632 34568888888
Q ss_pred ---cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccc-ccCCCeEEEEeccccccCCCCch
Q 039397 105 ---NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL-HESNGRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 ---~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m-~~~~g~IV~isS~~~~~~~~~~~ 180 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.+ ++++|+||++||.+ ..+.+...
T Consensus 92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~ 169 (303)
T 1yxm_A 92 KSTLDTFGKINFLVNNGGGQFLSPAEHI-SSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAV 169 (303)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcch
Confidence 2345789999999998776666665 468899999999999999999999954 44569999999998 88889999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|+++|+|+++++++++.|++++ |+|++|+||++.|++....................+..+..+|||+|+++++++++
T Consensus 170 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~ 249 (303)
T 1yxm_A 170 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSP 249 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCc
Confidence 99999999999999999999887 99999999999999532211110010111111223456788999999999999987
Q ss_pred CCce
Q 039397 260 GDTY 263 (349)
Q Consensus 260 ~~~~ 263 (349)
...+
T Consensus 250 ~~~~ 253 (303)
T 1yxm_A 250 AASF 253 (303)
T ss_dssp GGTT
T ss_pred cccc
Confidence 5443
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-36 Score=267.74 Aligned_cols=214 Identities=21% Similarity=0.200 Sum_probs=176.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
..++++|+++||||+||||++++++|+++|++|++++|+ .+++++...++...+.++..+.+| .+
T Consensus 2 ~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA 81 (258)
T ss_dssp CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 346889999999999999999999999999999999999 777777766664445578888888 23
Q ss_pred cCCCcceeeecCcC-CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC------CeEEEEecccccc-CCCC
Q 039397 107 ESKAVDHLVNTASL-GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN------GRVVVNASVENWL-PLPR 178 (349)
Q Consensus 107 ~~g~iDvlVnnAg~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------g~IV~isS~~~~~-~~~~ 178 (349)
.+|++|+||||||. ....++.+. +.++|++++++|+.|+++++++++|.|++++ ++||++||..+.. +.++
T Consensus 82 ~~g~id~vi~~Ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~ 160 (258)
T 3afn_B 82 KFGGIDVLINNAGGLVGRKPLPEI-DDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG 160 (258)
T ss_dssp HHSSCSEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT
T ss_pred HcCCCCEEEECCCCcCCcCccccC-CHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC
Confidence 45689999999998 655666665 4588999999999999999999999996543 8999999999988 8889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
...|++||++++.+++.++.|++++ |+|++++||+++|++..... +. .........+..+..+|+|+|+++++++
T Consensus 161 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~ 236 (258)
T 3afn_B 161 AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT---QD-VRDRISNGIPMGRFGTAEEMAPAFLFFA 236 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC---HH-HHHHHHTTCTTCSCBCGGGTHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC---HH-HHHHHhccCCCCcCCCHHHHHHHHHHHh
Confidence 9999999999999999999999887 99999999999999875421 10 1111112234557889999999999999
Q ss_pred hcC
Q 039397 258 CRG 260 (349)
Q Consensus 258 ~~~ 260 (349)
++.
T Consensus 237 ~~~ 239 (258)
T 3afn_B 237 SHL 239 (258)
T ss_dssp CHH
T ss_pred Ccc
Confidence 764
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=261.22 Aligned_cols=216 Identities=20% Similarity=0.194 Sum_probs=175.4
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKA 110 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~ 110 (349)
|+.+|++|+++||||+||||++++++|+++|++|++++|+.+++++...+.. ....+.+| .+.+++
T Consensus 1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~ 76 (244)
T 1cyd_A 1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALGGIGP 76 (244)
T ss_dssp --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCC
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc----CCCcEEecCCCHHHHHHHHHHcCC
Confidence 4467899999999999999999999999999999999999887776555431 23455777 234678
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
+|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||..+..+.++...|++||++
T Consensus 77 id~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 155 (244)
T 1cyd_A 77 VDLLVNNAALVIMQPFLEV-TKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGA 155 (244)
T ss_dssp CSEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCEEEECCcccCCCCcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHH
Confidence 9999999999877777775 468899999999999999999999999764 4899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
++.++++++.|++++ |++++++||++.|++...... ............+..+..+|+|+|+++++++++...+
T Consensus 156 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 229 (244)
T 1cyd_A 156 MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA--DPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSAS 229 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc--CHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhc
Confidence 999999999999877 999999999999987542211 1101111122234567889999999999999876443
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-35 Score=265.22 Aligned_cols=217 Identities=19% Similarity=0.200 Sum_probs=176.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC--CCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d--------------~~~ 107 (349)
++++|++|||||++|||++++++|+++|++|++++|+.+++++...++... ...+..+.+| .+.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999999998887776666322 2467778888 223
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC---CeEEEEeccccc--cCCCCchhh
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN---GRVVVNASVENW--LPLPRMSLY 182 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---g~IV~isS~~~~--~~~~~~~~Y 182 (349)
++++|+||||||+....++.+. +.++|++++++|+.|++++++.++|.|++++ |+||++||..+. .+.++...|
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y 187 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSG-STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY 187 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred CCCCCEEEECCCCCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchh
Confidence 5789999999999877777765 4689999999999999999999999997654 899999999988 677788999
Q ss_pred HHHHHHHHHHHHHHHHHhc--CC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 183 ASAKAALVTFYESLRFELN--DE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~--~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
++||+++++++++++.|++ .. |++++|+||+++|++......... ... .......+..+|+|+|+++++++++
T Consensus 188 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~---~~~-~~~~~~~~~~~~~dvA~~i~~l~~~ 263 (279)
T 1xg5_A 188 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP---EKA-AATYEQMKCLKPEDVAEAVIYVLST 263 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH---HHH-HHHHC---CBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh---hHH-hhhcccccCCCHHHHHHHHHHHhcC
Confidence 9999999999999999997 66 999999999999998532211111 111 1122334678999999999999998
Q ss_pred CCceEE
Q 039397 260 GDTYVK 265 (349)
Q Consensus 260 ~~~~i~ 265 (349)
+..+.+
T Consensus 264 ~~~~~~ 269 (279)
T 1xg5_A 264 PAHIQI 269 (279)
T ss_dssp CTTEEE
T ss_pred CcceEe
Confidence 876654
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-35 Score=258.19 Aligned_cols=201 Identities=22% Similarity=0.207 Sum_probs=163.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKA 110 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~ 110 (349)
..+|+++||||+||||++++++|+++|++|++++|+.+++++...++. .+..+.+| .+.+++
T Consensus 3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999999999999888777665542 45667777 233578
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+|++|||||+....++.+. +.++|++++++|+.|++++++.++|.|+++ .|+||++||..+..+.++...|++||+++
T Consensus 79 id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 157 (234)
T 2ehd_A 79 LSALVNNAGVGVMKPVHEL-TLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGL 157 (234)
T ss_dssp CCEEEECCCCCCCSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHH
Confidence 9999999999877777775 468999999999999999999999999765 48999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++++++++.|++++ |++++++||+++|++.... .. . + ...+|||+|++++++++++..+++
T Consensus 158 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~-~--~--------~~~~~~dvA~~~~~l~~~~~~~~~ 219 (234)
T 2ehd_A 158 LGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----PG-Q--A--------WKLKPEDVAQAVLFALEMPGHAMV 219 (234)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEECC-------------------------------CCHHHHHHHHHHHHHSCCSSCC
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----cc-c--c--------CCCCHHHHHHHHHHHhCCCccccc
Confidence 99999999999887 9999999999999986531 00 0 0 147999999999999998876653
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=262.88 Aligned_cols=208 Identities=17% Similarity=0.237 Sum_probs=167.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC--CCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP--INEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d--------------~~~ 107 (349)
.+++|+++||||++|||++++++|+++|++|++++|+.+++++...++... ...+..+.+| .+.
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999988877766665332 3467788888 234
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCCchhhH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+|++|+||||||+. +.++|++++++|+.|++.++++++|+|+++ .|+||++||.++..+.++...|+
T Consensus 84 ~g~id~lv~~Ag~~---------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 154 (267)
T 2gdz_A 84 FGRLDILVNNAGVN---------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC 154 (267)
T ss_dssp HSCCCEEEECCCCC---------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred cCCCCEEEECCCCC---------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence 57899999999975 236789999999999999999999999764 58999999999999999999999
Q ss_pred HHHHHHHHHHHHH--HHHhcCC-eeEEEEecCcccCCCCCCccccccchh-hhhHH---HHhhhcCCCCHHHHHHHHHHH
Q 039397 184 SAKAALVTFYESL--RFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE-MQWKE---EREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 184 asKaal~~l~~~l--a~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~edvA~~i~~l 256 (349)
+||+|++++++++ +.|+++. |+||+|+||+++|++............ ..+.. ......+..+|||+|++++++
T Consensus 155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l 234 (267)
T 2gdz_A 155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITL 234 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHH
Confidence 9999999999995 6899888 999999999999998643211100000 00000 111223577999999999999
Q ss_pred HhcC
Q 039397 257 ACRG 260 (349)
Q Consensus 257 ~~~~ 260 (349)
+++.
T Consensus 235 ~s~~ 238 (267)
T 2gdz_A 235 IEDD 238 (267)
T ss_dssp HHCT
T ss_pred hcCc
Confidence 9874
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=264.91 Aligned_cols=196 Identities=14% Similarity=0.106 Sum_probs=162.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+..+|+++||||++|||+++|++|+++|++|++++|++++.++. .+.+| .+.+|
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~------------~~~~d~~d~~~v~~~~~~~~~~~g 86 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH------------SFTIKDSGEEEIKSVIEKINSKSI 86 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSE------------EEECSCSSHHHHHHHHHHHHTTTC
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccc------------ceEEEeCCHHHHHHHHHHHHHHcC
Confidence 44579999999999999999999999999999999998765431 12222 45678
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|+||||||+..........+.++|++++++|+.|+++++++++|.|++ +|+||++||.++..+.++...|++||+|+
T Consensus 87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaa~ 165 (251)
T 3orf_A 87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-GGLFVLTGASAALNRTSGMIAYGATKAAT 165 (251)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-CCEEEEEechhhccCCCCCchhHHHHHHH
Confidence 99999999998876653332356899999999999999999999999965 68999999999999999999999999999
Q ss_pred HHHHHHHHHHhc--CC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc-CCceE
Q 039397 190 VTFYESLRFELN--DE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR-GDTYV 264 (349)
Q Consensus 190 ~~l~~~la~el~--~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~-~~~~i 264 (349)
++++++++.|++ ++ |+||+|+||+++|++.+..... .+..+..+|||+|+++++++++ ...++
T Consensus 166 ~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~------------~~~~~~~~~~dva~~i~~l~~~~~~~~~ 232 (251)
T 3orf_A 166 HHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD------------ANFDDWTPLSEVAEKLFEWSTNSDSRPT 232 (251)
T ss_dssp HHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT------------SCGGGSBCHHHHHHHHHHHHHCGGGCCC
T ss_pred HHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc------------ccccccCCHHHHHHHHHHHhcCccccCC
Confidence 999999999986 66 9999999999999986542211 1234678999999999999998 54443
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=276.47 Aligned_cols=211 Identities=11% Similarity=-0.051 Sum_probs=170.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHH-cCCeEEEEecCcchhhh------------HHHHhcCCCCeEEEEEec------
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAK-RKANLVLVARRENRLQG------------STIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~-~G~~Vv~~~r~~~~l~~------------~~~~~~~~~~~~~~~~~d------ 104 (349)
.-.+|++||||||+|||+++|+.|++ +|++|++++|+.+..++ ..+.+...+..+..+.+|
T Consensus 44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~ 123 (405)
T 3zu3_A 44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI 123 (405)
T ss_dssp TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 45689999999999999999999999 99999999998765432 222333344567788888
Q ss_pred --------cccCCCcceeeecCcCC-------------CCccc---------------------cccCCcchHHHHHHhH
Q 039397 105 --------NKESKAVDHLVNTASLG-------------HTFFF---------------------EEVTDTSIFPRLLDIN 142 (349)
Q Consensus 105 --------~~~~g~iDvlVnnAg~~-------------~~~~~---------------------~~~~~~~~~~~~~~vN 142 (349)
.+++|++|+||||||+. ...++ .+. +.++|++++++|
T Consensus 124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~-t~ee~~~~v~Vn 202 (405)
T 3zu3_A 124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPA-TQSEIDSTVAVM 202 (405)
T ss_dssp HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCC-CHHHHHHHHHhh
Confidence 46789999999999985 22333 444 568999999999
Q ss_pred hhhhH-HHHHHhcc-ccccCCCeEEEEeccccccCCCCc--hhhHHHHHHHHHHHHHHHHHhcCC--eeEEEEecCcccC
Q 039397 143 FWGNV-YPTFVALP-YLHESNGRVVVNASVENWLPLPRM--SLYASAKAALVTFYESLRFELNDE--VGITIATHGWIGI 216 (349)
Q Consensus 143 ~~g~~-~l~~~~lp-~m~~~~g~IV~isS~~~~~~~~~~--~~Y~asKaal~~l~~~la~el~~~--I~v~~v~PG~v~T 216 (349)
..+.+ .+++++++ .|++++|+||++||+++..+.|.. ++|++||+|+++++++|+.||+++ ||||+|+||+++|
T Consensus 203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T 282 (405)
T 3zu3_A 203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVS 282 (405)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCC
T ss_pred chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcC
Confidence 99998 78887764 566667999999999999999987 999999999999999999999986 9999999999999
Q ss_pred CCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 217 EMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
++....... .........++++..+|||||+++.+|+++
T Consensus 283 ~~s~~ip~~----p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 283 QASSAIPMM----PLYLSLLFKVMKEKGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp HHHHTSTTH----HHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred chhhcCCCC----cHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 987654211 111122334678899999999999999987
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=266.10 Aligned_cols=218 Identities=16% Similarity=0.158 Sum_probs=175.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d--------------~ 105 (349)
+.+++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++. ..+..+..+.+| .
T Consensus 8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 87 (265)
T 1h5q_A 8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 87 (265)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence 3457889999999999999999999999999999999998766554444431 113457788888 2
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCC-----
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPR----- 178 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~----- 178 (349)
+.++++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+++ +|+||++||..+..+.+.
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~ 166 (265)
T 1h5q_A 88 ADLGPISGLIANAGVSVVKPATEL-THEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS 166 (265)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred HhcCCCCEEEECCCcCCCCchhhC-CHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccc
Confidence 346889999999999877777775 468999999999999999999999998654 389999999988776543
Q ss_pred --chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHH
Q 039397 179 --MSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 179 --~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~ 255 (349)
...|++||+++++++++++.|++++ |+|++++||+++|++..... +. .........+..+..+|||+|+++++
T Consensus 167 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~-~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (265)
T 1h5q_A 167 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---KK-IRDHQASNIPLNRFAQPEEMTGQAIL 242 (265)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HH-HHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc---hh-HHHHHHhcCcccCCCCHHHHHHHHHh
Confidence 7899999999999999999999887 99999999999999876431 11 11111222345678899999999999
Q ss_pred HHhcCCce
Q 039397 256 GACRGDTY 263 (349)
Q Consensus 256 l~~~~~~~ 263 (349)
++++...+
T Consensus 243 l~~~~~~~ 250 (265)
T 1h5q_A 243 LLSDHATY 250 (265)
T ss_dssp HHSGGGTT
T ss_pred hccCchhc
Confidence 99875443
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-35 Score=281.81 Aligned_cols=214 Identities=23% Similarity=0.253 Sum_probs=171.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch--hhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR--LQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~--l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
..++||+++||||++|||+++|++|+++|++|++++|+... +++...+. .+..+.+| .+
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~ 283 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTE 283 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999997532 33333332 23467777 24
Q ss_pred cCCC-cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKA-VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~-iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.+|+ +|+||||||+.....+.+. +.++|++++++|+.|+++++++++|.|+++ .|+||++||+++..+.++++.|++
T Consensus 284 ~~g~~id~lV~nAGv~~~~~~~~~-~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~Yaa 362 (454)
T 3u0b_A 284 HHGGKVDILVNNAGITRDKLLANM-DEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYAT 362 (454)
T ss_dssp HSTTCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHH
T ss_pred HcCCCceEEEECCcccCCCccccC-CHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHH
Confidence 4555 9999999999988888886 569999999999999999999999998754 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
||+++++|+++++.|++++ |+||+|+||+++|+|........ ........+..+..+|+|+|+++++++++...+
T Consensus 363 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~ 438 (454)
T 3u0b_A 363 TKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT----REVGRRLNSLFQGGQPVDVAELIAYFASPASNA 438 (454)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTT
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh----HHHHHhhccccCCCCHHHHHHHHHHHhCCccCC
Confidence 9999999999999999988 99999999999999986532111 111222345567889999999999999987776
Q ss_pred EEc
Q 039397 264 VKF 266 (349)
Q Consensus 264 i~~ 266 (349)
++.
T Consensus 439 itG 441 (454)
T 3u0b_A 439 VTG 441 (454)
T ss_dssp CCS
T ss_pred CCC
Confidence 653
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=262.35 Aligned_cols=214 Identities=20% Similarity=0.193 Sum_probs=176.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+++++|+++||||+||||++++++|+++|++|++++|+.+++++...++...+.++..+.+| .+.+
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 46889999999999999999999999999999999999888877766664334567788888 2235
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
+++|+||||||.....++ +. +.++|++++++|+.|+++++++++|.|+++ .|+||++||..+..+.++...|++||+
T Consensus 87 ~~~d~vi~~Ag~~~~~~~-~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 164 (255)
T 1fmc_A 87 GKVDILVNNAGGGGPKPF-DM-PMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA 164 (255)
T ss_dssp SSCCEEEECCCCCCCCCT-TC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCC-CC-CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence 689999999998776655 43 468899999999999999999999999764 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+++.++++++.|++++ |++++++||++.|++...... +. .........+..+..+|+|+|+++++++++..
T Consensus 165 a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 236 (255)
T 1fmc_A 165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT--PE-IEQKMLQHTPIRRLGQPQDIANAALFLCSPAA 236 (255)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC--HH-HHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccC--hH-HHHHHHhcCCcccCCCHHHHHHHHHHHhCCcc
Confidence 9999999999999887 999999999999997654211 10 11111122345578899999999999998653
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=264.70 Aligned_cols=198 Identities=22% Similarity=0.214 Sum_probs=164.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEecccc--------------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLNNKE-------------- 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d~~~-------------- 107 (349)
..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. ....+..+.+|...
T Consensus 8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999998888777733 34568888888333
Q ss_pred -CCCcceeeecCcCCCCc------------------------------cccccCCcchHHHHHHhHhhhhHHHHHHhccc
Q 039397 108 -SKAVDHLVNTASLGHTF------------------------------FFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156 (349)
Q Consensus 108 -~g~iDvlVnnAg~~~~~------------------------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 156 (349)
+|++|+||||||+.... .+.+. +.+++++++++|+.|+++++++++|+
T Consensus 88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (311)
T 3o26_A 88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSE-TYELAEECLKINYNGVKSVTEVLIPL 166 (311)
T ss_dssp HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEEC-CHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhccccc-chhhhhhheeeeeehHHHHHHHhhHh
Confidence 47999999999987432 22333 45889999999999999999999999
Q ss_pred cccCC-CeEEEEeccccccCC-------------------------------------------CCchhhHHHHHHHHHH
Q 039397 157 LHESN-GRVVVNASVENWLPL-------------------------------------------PRMSLYASAKAALVTF 192 (349)
Q Consensus 157 m~~~~-g~IV~isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l 192 (349)
|++++ |+||++||.++..+. ++...|++||+|+++|
T Consensus 167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~ 246 (311)
T 3o26_A 167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY 246 (311)
T ss_dssp HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence 97654 899999999987654 4568899999999999
Q ss_pred HHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 193 YESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 193 ~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+++++.|+++ |+||+|+||+|+|+|.... ...++|+.|+.++.++....
T Consensus 247 ~~~la~e~~~-i~v~~v~PG~v~T~~~~~~-------------------~~~~~~~~a~~~~~~~~~~~ 295 (311)
T 3o26_A 247 TRVLANKIPK-FQVNCVCPGLVKTEMNYGI-------------------GNYTAEEGAEHVVRIALFPD 295 (311)
T ss_dssp HHHHHHHCTT-SEEEEECCCSBCSGGGTTC-------------------CSBCHHHHHHHHHHHHTCCS
T ss_pred HHHHHhhcCC-ceEEEecCCceecCCcCCC-------------------CCCCHHHHHHHHHHHHhCCC
Confidence 9999999976 9999999999999987642 23578999999999887543
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=260.70 Aligned_cols=207 Identities=21% Similarity=0.204 Sum_probs=171.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
||+++||||+||||++++++|+++|++|+++ +|+++++++...++...+.++..+.+| .+.+|++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999999999995 888877776666553334467788888 2346799
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
|++|||||+....++.+. +.++|++++++|+.|+++++++++|+|+++ .|+||++||.++..+.++...|++||++++
T Consensus 81 d~li~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 159 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRM-KKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI 159 (244)
T ss_dssp SEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCcCcccC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence 999999999877777665 468899999999999999999999999754 489999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+++++++.|++++ |++++++||+++|++...... . .........+..+..+|+|+|+++++++.
T Consensus 160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 224 (244)
T 1edo_A 160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE---D-MEKKILGTIPLGRTGQPENVAGLVEFLAL 224 (244)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH---H-HHHHHHTSCTTCSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh---H-HHHHHhhcCCCCCCCCHHHHHHHHHHHhC
Confidence 9999999999887 999999999999998654211 0 11111112344567899999999999994
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=265.32 Aligned_cols=218 Identities=17% Similarity=0.101 Sum_probs=175.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC-CCeEEEEEec--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP-INEVTLVSLN--------------NK 106 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~-~~~~~~~~~d--------------~~ 106 (349)
.++++||+++||||+||||+++|++|+++|++|++++|+.+++++..+++... +..+..+.+| .+
T Consensus 21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK 100 (302)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999998887766665322 3467888888 34
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccc-c-CCCeEEEEeccccccCCCCchhhHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLH-E-SNGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~-~-~~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|.|+ + ++|+||++||..+..+.++...|++
T Consensus 101 ~~g~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 179 (302)
T 1w6u_A 101 VAGHPNIVINNAAGNFISPTERL-SPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS 179 (302)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred HcCCCCEEEECCCCCCCCccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHH
Confidence 56899999999998877777665 4688999999999999999999999996 3 3489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCC-CCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIE-MTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
||+|+++++++++.|++++ |++++++||+++|+ +...... ... .........+..+..+|||+|+++++++++...
T Consensus 180 sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~-~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~ 257 (302)
T 1w6u_A 180 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-TGT-FEKEMIGRIPCGRLGTVEELANLAAFLCSDYAS 257 (302)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-TSH-HHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhccc-chh-hHHHHHhcCCcCCCCCHHHHHHHHHHHcCCccc
Confidence 9999999999999999887 99999999999998 4332211 110 001111223456788999999999999986543
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=261.32 Aligned_cols=194 Identities=16% Similarity=0.110 Sum_probs=160.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC--
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES-- 108 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~-- 108 (349)
|++|+++||||++|||++++++|+++|++|++++|++++.++ ....+.+| .+.+
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD----------SNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS----------EEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc----------ccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999999999999876431 23445566 1223
Q ss_pred CCcceeeecCcCCCCccc-cccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFF-EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++ .+. +.++|++++++|+.|+++++++++|+|++ +|+||++||.++..+.++...|++||+
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~ 148 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKD-FVKNADLMIKQSVWSSAIAAKLATTHLKP-GGLLQLTGAAAAMGPTPSMIGYGMAKA 148 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTT-HHHHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCcccCCCCCcccC-CHHHHHHHHHHHhHHHHHHHHHHHHHhcc-CCEEEEECchhhccCCCCcHHHHHHHH
Confidence 799999999998876666 454 46889999999999999999999999965 589999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc--CC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHH-hcCCc
Q 039397 188 ALVTFYESLRFELN--DE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGA-CRGDT 262 (349)
Q Consensus 188 al~~l~~~la~el~--~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~-~~~~~ 262 (349)
|+++|+++++.|++ ++ |+||+|+||+++|++....... .......+|||+|+.+++++ ++...
T Consensus 149 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~------------~~~~~~~~~~dvA~~i~~~l~s~~~~ 215 (236)
T 1ooe_A 149 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN------------ADHSSWTPLSFISEHLLKWTTETSSR 215 (236)
T ss_dssp HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT------------CCGGGCBCHHHHHHHHHHHHHCGGGC
T ss_pred HHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC------------ccccccCCHHHHHHHHHHHHcCCCcc
Confidence 99999999999998 77 9999999999999986432110 01124678999999999666 54333
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=263.52 Aligned_cols=204 Identities=21% Similarity=0.240 Sum_probs=160.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVD 112 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iD 112 (349)
.+++||+++||||++|||+++|++|+++|++|++++|+.+++++...++ ..++..+.+| .++.+++|
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 4789999999999999999999999999999999999998887766554 4578888888 23447899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-------------CCCc
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-------------LPRM 179 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-------------~~~~ 179 (349)
+||||||+.... .+. +.++|++++++|+.|+++++++++|+|++ +||++||.++..+ .++.
T Consensus 89 ~lv~nAg~~~~~--~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---riv~isS~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
T 3rd5_A 89 VLINNAGIMAVP--YAL-TVDGFESQIGTNHLGHFALTNLLLPRLTD---RVVTVSSMAHWPGRINLEDLNWRSRRYSPW 162 (291)
T ss_dssp EEEECCCCCSCC--CCB-CTTSCBHHHHHHTHHHHHHHHHHGGGEEE---EEEEECCGGGTTCCCCSSCTTCSSSCCCHH
T ss_pred EEEECCcCCCCc--ccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHh---heeEeechhhccCCCCcccccccccCCCCc
Confidence 999999987533 333 35789999999999999999999999975 8999999998755 3566
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC---eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCC-CHHHHHHHHHH
Q 039397 180 SLYASAKAALVTFYESLRFELNDE---VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGG-PVEDFARLIVS 255 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~---I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~edvA~~i~~ 255 (349)
..|++||+|+++|+++++.|++++ |+||+|+||+++|++.+....... . .....+..+.. +|||+|+.+++
T Consensus 163 ~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~A~~~~~ 237 (291)
T 3rd5_A 163 LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLG----D-ALMSAATRVVATDADFGARQTLY 237 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------CHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHH----H-HHHHHHHHHHhCCHHHHHHHHHH
Confidence 789999999999999999999754 999999999999999875321111 0 01112222333 59999999999
Q ss_pred HHhcC
Q 039397 256 GACRG 260 (349)
Q Consensus 256 l~~~~ 260 (349)
+++++
T Consensus 238 l~~~~ 242 (291)
T 3rd5_A 238 AASQD 242 (291)
T ss_dssp HHHSC
T ss_pred HHcCC
Confidence 99984
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=264.05 Aligned_cols=217 Identities=16% Similarity=0.138 Sum_probs=174.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
+++++|+++||||+||||++++++|+++|++|++++|+.+++++....+...+.++..+.+| .+.+
T Consensus 30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 109 (279)
T 3ctm_A 30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF 109 (279)
T ss_dssp GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 36889999999999999999999999999999999999887766655543223467788888 2345
Q ss_pred CCcceeeecCcCCCC-cccc-ccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccC--CCCchhhH
Q 039397 109 KAVDHLVNTASLGHT-FFFE-EVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLP--LPRMSLYA 183 (349)
Q Consensus 109 g~iDvlVnnAg~~~~-~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~--~~~~~~Y~ 183 (349)
|++|+||||||+... .++. +. +.++|++++++|+.|++++++.++|.|+++ .|+||++||.++..+ .++...|+
T Consensus 110 g~id~li~~Ag~~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~ 188 (279)
T 3ctm_A 110 GTIDVFVANAGVTWTQGPEIDVD-NYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYN 188 (279)
T ss_dssp SCCSEEEECGGGSTTC--CCCSS-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHH
T ss_pred CCCCEEEECCcccccCCcccccC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHH
Confidence 789999999998766 5555 43 568899999999999999999999999754 489999999999888 78899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 184 SAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+||+++++++++++.|++++-+||+++||+++|++.... .+. .........+.++..+|+|+|+++++++++...+
T Consensus 189 ~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~~~~---~~~-~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~ 264 (279)
T 3ctm_A 189 TAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDITDFA---SKD-MKAKWWQLTPLGREGLTQELVGGYLYLASNASTF 264 (279)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTTSSC---CHH-HHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEeccCCcccccccc---ChH-HHHHHHHhCCccCCcCHHHHHHHHHHHhCccccC
Confidence 999999999999999997645999999999999987531 111 1111112335567889999999999999875444
Q ss_pred E
Q 039397 264 V 264 (349)
Q Consensus 264 i 264 (349)
+
T Consensus 265 ~ 265 (279)
T 3ctm_A 265 T 265 (279)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=262.23 Aligned_cols=220 Identities=17% Similarity=0.197 Sum_probs=177.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
..+++++|+++||||+||||++++++|+++|++|++++| +.+++++...++...+.++..+.+| .
T Consensus 15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV 94 (274)
T ss_dssp -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999 7677766666654334567788888 2
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-cCCCCchhhHH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-LPLPRMSLYAS 184 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-~~~~~~~~Y~a 184 (349)
++++++|++|||||+....++.+. +.++|++++++|+.|+++++++++|.|++ +|+||++||.++. .+.++...|++
T Consensus 95 ~~~~~~d~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~ 172 (274)
T 1ja9_A 95 SHFGGLDFVMSNSGMEVWCDELEV-TQELFDKVFNLNTRGQFFVAQQGLKHCRR-GGRIILTSSIAAVMTGIPNHALYAG 172 (274)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHEEE-EEEEEEECCGGGTCCSCCSCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCcccccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCEEEEEcChHhccCCCCCCchHHH
Confidence 345789999999999877777665 56889999999999999999999999974 4899999999998 78899999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc--------ccc-chhhhhHHHHhhhcCCCCHHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM--------LED-GAEMQWKEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~edvA~~i~ 254 (349)
||++++.++++++.|++.+ |++++++||+++|++...... ... ...........+..+..+|+|+|++++
T Consensus 173 sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~ 252 (274)
T 1ja9_A 173 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS 252 (274)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence 9999999999999999887 999999999999998652110 000 101111112234567889999999999
Q ss_pred HHHhcCCc
Q 039397 255 SGACRGDT 262 (349)
Q Consensus 255 ~l~~~~~~ 262 (349)
+++++...
T Consensus 253 ~l~~~~~~ 260 (274)
T 1ja9_A 253 ALCQEESE 260 (274)
T ss_dssp HHHSGGGT
T ss_pred HHhCcccc
Confidence 99987543
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-35 Score=269.86 Aligned_cols=203 Identities=18% Similarity=0.160 Sum_probs=165.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec---------CcchhhhHHHHhcCCCCeEEEEEec---------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR---------RENRLQGSTIDEYNPINEVTLVSLN--------- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r---------~~~~l~~~~~~~~~~~~~~~~~~~d--------- 104 (349)
++++||+++||||++|||+++|++|+++|++|++++| +.+++++..+++.........-..|
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK 84 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence 4688999999999999999999999999999999754 5666666666663333333221111
Q ss_pred --cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchh
Q 039397 105 --NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 105 --~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~ 181 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++...
T Consensus 85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~ 163 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGILRDRSFSRI-SDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQAN 163 (319)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHH
Confidence 2347899999999999877777765 4589999999999999999999999997654 89999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++||+|+++|+++++.|++++ |+||+|+||++ |++...... . . .....+|+|+|+.+++++++.
T Consensus 164 Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~---~------~----~~~~~~p~dvA~~~~~l~s~~ 229 (319)
T 1gz6_A 164 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP---E------D----LVEALKPEYVAPLVLWLCHES 229 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC---H------H----HHHHSCGGGTHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC---h------h----hhccCCHHHHHHHHHHHhCch
Confidence 9999999999999999999988 99999999998 877543210 0 0 012368999999999999864
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=292.66 Aligned_cols=206 Identities=18% Similarity=0.156 Sum_probs=157.2
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec---------CcchhhhHHHHhcCCCCeEEEEEec------
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR---------RENRLQGSTIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r---------~~~~l~~~~~~~~~~~~~~~~~~~d------ 104 (349)
....+++||+++||||++|||+++|++|+++|++|++++| +.++++++.+++...+........|
T Consensus 12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~ 91 (613)
T 3oml_A 12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAK 91 (613)
T ss_dssp ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHH
Confidence 3456899999999999999999999999999999999988 6666777766664333333322222
Q ss_pred -----cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCC
Q 039397 105 -----NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPR 178 (349)
Q Consensus 105 -----~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~ 178 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.++
T Consensus 92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~-~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~ 170 (613)
T 3oml_A 92 VIETAIKAFGRVDILVNNAGILRDRSLVKT-SEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG 170 (613)
T ss_dssp HHC----------CEECCCCCCCCCCSTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTT
T ss_pred HHHHHHHHCCCCcEEEECCCCCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence 3557899999999999888888776 4689999999999999999999999997665 89999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
...|++||+|+++|+++|+.|++++ |+||+|+||.+ |++....... ......+|||+|+.+++++
T Consensus 171 ~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~-------------~~~~~~~pedvA~~v~~L~ 236 (613)
T 3oml_A 171 QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD-------------ILFNELKPKLIAPVVAYLC 236 (613)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH-------------HHHTTCCGGGTHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch-------------hhhhcCCHHHHHHHHHHhc
Confidence 9999999999999999999999988 99999999975 6665543211 1124568999999999999
Q ss_pred hcC
Q 039397 258 CRG 260 (349)
Q Consensus 258 ~~~ 260 (349)
++.
T Consensus 237 s~~ 239 (613)
T 3oml_A 237 HES 239 (613)
T ss_dssp STT
T ss_pred CCC
Confidence 986
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=257.83 Aligned_cols=210 Identities=20% Similarity=0.216 Sum_probs=172.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcCCCCeEEE-EEec--------------cccCCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYNPINEVTL-VSLN--------------NKESKA 110 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~~~~~~~~-~~~d--------------~~~~g~ 110 (349)
+|+++||||+||||++++++|+++|++|+++ +|+.+++++...++...+..+.. +.+| .+.+++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999999999998 89888877766665333334555 7777 223578
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
+|++|||||+....++.+. +.++|++++++|+.|+++++++++|.|++++ |+||++||..+..+.++...|++||+++
T Consensus 81 ~d~li~~Ag~~~~~~~~~~-~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 159 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRM-KDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL 159 (245)
T ss_dssp CCEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccC-CHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence 9999999999877777665 4688999999999999999999999997654 8999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++++++++.|++++ |++++++||+++|++..... .. .........+..+..+|+|+|+++++++++..
T Consensus 160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 228 (245)
T 2ph3_A 160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP---QE-VKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKA 228 (245)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HH-HHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC---HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999999887 99999999999999865421 10 11111112234577899999999999998743
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-34 Score=253.10 Aligned_cols=196 Identities=22% Similarity=0.223 Sum_probs=158.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------------ccC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------------KES 108 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------------~~~ 108 (349)
|++|+++||||++|||++++++|+++| ++|++++|+.++++++.. + ....+..+.+|. +.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999 999999999887765432 2 244678888882 233
Q ss_pred C--CcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC------------CCeEEEEeccccc
Q 039397 109 K--AVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES------------NGRVVVNASVENW 173 (349)
Q Consensus 109 g--~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~------------~g~IV~isS~~~~ 173 (349)
| ++|+||||||+.. ..++.+. +.+++++++++|+.|+++++++++|.|+++ .|+||++||..+.
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEP-NRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCC-CHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred CCCCCcEEEECCcccCCCcccccC-CHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 4 8999999999987 5666665 468899999999999999999999999764 6899999999998
Q ss_pred cCC-------CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCC
Q 039397 174 LPL-------PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGP 245 (349)
Q Consensus 174 ~~~-------~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
.+. ++...|++||+++++++++++.|++++ |+|++++||+++|++... ....+
T Consensus 157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------~~~~~ 217 (250)
T 1yo6_A 157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------NAALT 217 (250)
T ss_dssp STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred cCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------CCCCC
Confidence 776 678899999999999999999999887 999999999999998642 14578
Q ss_pred HHHHHHHHHHHHhcCCce
Q 039397 246 VEDFARLIVSGACRGDTY 263 (349)
Q Consensus 246 ~edvA~~i~~l~~~~~~~ 263 (349)
|||+|+.+++++++...+
T Consensus 218 ~~~~a~~~~~~~~~~~~~ 235 (250)
T 1yo6_A 218 VEQSTAELISSFNKLDNS 235 (250)
T ss_dssp -HHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHhccccc
Confidence 999999999999886543
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=251.98 Aligned_cols=204 Identities=25% Similarity=0.246 Sum_probs=160.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCcc--hhhhHHHHhcCCCCeEEEEEecccc------------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKAN-LVLVARREN--RLQGSTIDEYNPINEVTLVSLNNKE------------ 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~~--~l~~~~~~~~~~~~~~~~~~~d~~~------------ 107 (349)
|+|++|+++||||++|||+++|++|+++|++ |++++|+.+ .++++... ..+..+..+.+|..+
T Consensus 1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAI--NPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHH--CTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHh--CCCceEEEEEEecCCChHHHHHHHHHH
Confidence 3688999999999999999999999999996 999999874 23333222 123467788888433
Q ss_pred ---CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCCch
Q 039397 108 ---SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 108 ---~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~~~ 180 (349)
+|++|+||||||+. +.++|++++++|+.|+++++++++|+|+++ +|+||++||.++..+.++..
T Consensus 79 ~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 149 (254)
T 1sby_A 79 FDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP 149 (254)
T ss_dssp HHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred HHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCch
Confidence 36899999999974 247799999999999999999999999765 48999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+++++++++.|++++ |+||+|+||+++|++.......... ...... ........+|||+|+.+++++++
T Consensus 150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~dvA~~i~~~~~~ 227 (254)
T 1sby_A 150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDV-EPRVAE-LLLSHPTQTSEQCGQNFVKAIEA 227 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGS-CTTHHH-HHTTSCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhh-hHHHHH-HHhcCCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999998866 9999999999999986542111000 000111 11112345899999999999874
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-33 Score=251.63 Aligned_cols=203 Identities=16% Similarity=0.191 Sum_probs=166.2
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcC---CeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-----------
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRK---ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN----------- 105 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G---~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~----------- 105 (349)
....++++|+++||||++|||+++|++|+++| ++|++++|+.++++.+. ++.....++.++.+|.
T Consensus 14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~-~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 92 (267)
T 1sny_A 14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVA 92 (267)
T ss_dssp ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH-HhhccCCceEEEEecCCChHHHHHHHH
Confidence 34557889999999999999999999999999 99999999987765432 2221134678888882
Q ss_pred ---ccCC--CcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC------------CCeEEEE
Q 039397 106 ---KESK--AVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES------------NGRVVVN 167 (349)
Q Consensus 106 ---~~~g--~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~------------~g~IV~i 167 (349)
+.+| ++|+||||||+.. ..++.+. +.+++++++++|+.|+++++++++|.|+++ .|+||++
T Consensus 93 ~~~~~~g~~~id~li~~Ag~~~~~~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i 171 (267)
T 1sny_A 93 DIEGVTKDQGLNVLFNNAGIAPKSARITAV-RSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM 171 (267)
T ss_dssp HHHHHHGGGCCSEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred HHHHhcCCCCccEEEECCCcCCCccccccC-CHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence 2234 7999999999987 5666665 468999999999999999999999999765 5899999
Q ss_pred eccccccCCC---CchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCC
Q 039397 168 ASVENWLPLP---RMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG 243 (349)
Q Consensus 168 sS~~~~~~~~---~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (349)
||..+..+.+ +...|++||+++++++++++.|++++ |+|++|+||+++|++... ...
T Consensus 172 sS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------~~~ 232 (267)
T 1sny_A 172 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------------SAP 232 (267)
T ss_dssp CCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------TCS
T ss_pred ecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------CCC
Confidence 9999987753 77889999999999999999999887 999999999999998642 145
Q ss_pred CCHHHHHHHHHHHHhcCCce
Q 039397 244 GPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 244 ~~~edvA~~i~~l~~~~~~~ 263 (349)
.+|+++|+.+++++++....
T Consensus 233 ~~~~~~a~~~~~~~~~~~~~ 252 (267)
T 1sny_A 233 LDVPTSTGQIVQTISKLGEK 252 (267)
T ss_dssp BCHHHHHHHHHHHHHHCCGG
T ss_pred CCHHHHHHHHHHHHHhcCcC
Confidence 78999999999999876543
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=251.14 Aligned_cols=203 Identities=17% Similarity=0.160 Sum_probs=146.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh-HHHHhcCCCCeEEEEEeccccC-CCcceeeecCcCCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPINEVTLVSLNNKES-KAVDHLVNTASLGHTFF 125 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~-g~iDvlVnnAg~~~~~~ 125 (349)
|+++||||++|||+++|++|+++|++|++++|++++++. ...|+.+... +..-.++. +++|+||||||+...
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~----v~~~~~~~~~~id~lv~~Ag~~~~-- 75 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQA----IADVLAKCSKGMDGLVLCAGLGPQ-- 75 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHH----HHHHHTTCTTCCSEEEECCCCCTT--
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHH----HHHHHHHhCCCCCEEEECCCCCCC--
Confidence 689999999999999999999999999999999866432 1111100000 00002234 899999999997531
Q ss_pred ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccc----------------------------cCC
Q 039397 126 FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENW----------------------------LPL 176 (349)
Q Consensus 126 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~----------------------------~~~ 176 (349)
.+.|++++++|+.|+++++++++|+|++++ |+||++||.++. .+.
T Consensus 76 ------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T 1fjh_A 76 ------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ 149 (257)
T ss_dssp ------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT
T ss_pred ------cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCC
Confidence 134899999999999999999999997654 899999999988 455
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHH-HhhhcCCCCHHHHHHHHH
Q 039397 177 PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE-REVHVAGGPVEDFARLIV 254 (349)
Q Consensus 177 ~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~edvA~~i~ 254 (349)
++...|++||+|++.++++++.|++++ |+||+|+||+++|++......... ....... ..+..+..+|||+|++++
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dvA~~~~ 227 (257)
T 1fjh_A 150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR--YGESIAKFVPPMGRRAEPSEMASVIA 227 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCSTTSCCCTHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchh--HHHHHHhcccccCCCCCHHHHHHHHH
Confidence 577899999999999999999999887 999999999999998764311110 0000110 224457889999999999
Q ss_pred HHHhcCCceE
Q 039397 255 SGACRGDTYV 264 (349)
Q Consensus 255 ~l~~~~~~~i 264 (349)
+++++...++
T Consensus 228 ~l~~~~~~~~ 237 (257)
T 1fjh_A 228 FLMSPAASYV 237 (257)
T ss_dssp HHTSGGGTTC
T ss_pred HHhCchhcCC
Confidence 9998764443
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-32 Score=261.40 Aligned_cols=211 Identities=11% Similarity=-0.088 Sum_probs=168.0
Q ss_pred CCCCEEEEeCCCchHHHH--HHHHHHHcCCeEEEEecCcchh------------hhHHHHhcCCCCeEEEEEec------
Q 039397 45 MEDKVVIITGASSDIGEQ--IAYEYAKRKANLVLVARRENRL------------QGSTIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~a--la~~la~~G~~Vv~~~r~~~~l------------~~~~~~~~~~~~~~~~~~~d------ 104 (349)
..||++||||||+|||++ ++++|+++|++|++++|+.+.. +.+.+.+...+..+..+.+|
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 689999999999999999 9999999999999999976542 22232333344567888888
Q ss_pred --------cccCCCcceeeecCcCC-------------CCccc---------------------cccCCcchHHHHHHhH
Q 039397 105 --------NKESKAVDHLVNTASLG-------------HTFFF---------------------EEVTDTSIFPRLLDIN 142 (349)
Q Consensus 105 --------~~~~g~iDvlVnnAg~~-------------~~~~~---------------------~~~~~~~~~~~~~~vN 142 (349)
.+++|++|+||||||.. ...++ .+. +.++|++++++|
T Consensus 138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~-t~e~~~~~~~vn 216 (418)
T 4eue_A 138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSA-SIEEIEETRKVM 216 (418)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCC-CHHHHHHHHHHh
Confidence 45679999999999985 22233 223 458899999999
Q ss_pred hhhhH-HHHHHhcc-ccccCCCeEEEEeccccccCCCCc--hhhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcccC
Q 039397 143 FWGNV-YPTFVALP-YLHESNGRVVVNASVENWLPLPRM--SLYASAKAALVTFYESLRFELND-E-VGITIATHGWIGI 216 (349)
Q Consensus 143 ~~g~~-~l~~~~lp-~m~~~~g~IV~isS~~~~~~~~~~--~~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v~T 216 (349)
..+.+ .+++++++ .|.+++|+||++||+++..+.|.+ ++|++||+|+++|+++|+.|+++ + |+||+|+||+++|
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T 296 (418)
T 4eue_A 217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT 296 (418)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence 99888 77777665 455667999999999999999988 99999999999999999999999 7 9999999999999
Q ss_pred CCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 217 EMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++....... .........++++..++|+|++++.+++++.
T Consensus 297 ~~s~~ip~~----p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~ 336 (418)
T 4eue_A 297 KASAYIPTF----PLYAAILYKVMKEKNIHENCIMQIERMFSEK 336 (418)
T ss_dssp HHHHTSTTH----HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred hhhhcCCCC----cHHHHHHHHHHhhcCChHHHHHHHHHHhhcc
Confidence 987654211 1111222335667889999999999999874
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-32 Score=245.88 Aligned_cols=194 Identities=22% Similarity=0.223 Sum_probs=161.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHH-cCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAK-RKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~-~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
.++|+++||||+||||++++++|++ +|++|++++|+.+++++...++...+.++.++.+| .+.+|
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999 99999999999888877776664334567788888 23357
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC--------------
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-------------- 175 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-------------- 175 (349)
++|+||||||+...... +.+..+++++++++|+.|+++++++++|.|++ +|+||++||..+..+
T Consensus 82 ~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~~~~~~~~~ 159 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-QGRVVNVSSIMSVRALKSCSPELQQKFRS 159 (276)
T ss_dssp SEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred CCCEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-CCEEEEECChhhhcccccCChhHHhhccc
Confidence 89999999998754432 22223789999999999999999999999965 589999999887642
Q ss_pred ----------------------------CCCchhhHHHHHHHHHHHHHHHHHhcC----C-eeEEEEecCcccCCCCCCc
Q 039397 176 ----------------------------LPRMSLYASAKAALVTFYESLRFELND----E-VGITIATHGWIGIEMTKGK 222 (349)
Q Consensus 176 ----------------------------~~~~~~Y~asKaal~~l~~~la~el~~----~-I~v~~v~PG~v~T~~~~~~ 222 (349)
.| ...|++||++++.+++.++.|++. + |+|++|+||+++|++...
T Consensus 160 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~- 237 (276)
T 1wma_A 160 ETITEEELVGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP- 237 (276)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-
T ss_pred cccchhhhhhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-
Confidence 12 378999999999999999999976 5 999999999999998653
Q ss_pred cccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 223 FMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
....+|+|+|+.++++++.+
T Consensus 238 ------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 ------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp ------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred ------------------cccCChhHhhhhHhhhhcCc
Confidence 14678999999999999854
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=9.2e-32 Score=239.26 Aligned_cols=196 Identities=19% Similarity=0.213 Sum_probs=160.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------cccCCCcce
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------NKESKAVDH 113 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------~~~~g~iDv 113 (349)
+|+++||||++|||++++++|+++|++|++++|+.+ .+ .+..+.+| .+.++++|+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~-----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~ 69 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE-----------DLIYVEGDVTREEDVRRAVARAQEEAPLFA 69 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS-----------SSEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc-----------ceEEEeCCCCCHHHHHHHHHHHHhhCCceE
Confidence 689999999999999999999999999999999875 22 12455666 123468999
Q ss_pred eeecCcCCCCccccccCCcc----hHHHHHHhHhhhhHHHHHHhccccccCC-------CeEEEEeccccccCCCCchhh
Q 039397 114 LVNTASLGHTFFFEEVTDTS----IFPRLLDINFWGNVYPTFVALPYLHESN-------GRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~----~~~~~~~vN~~g~~~l~~~~lp~m~~~~-------g~IV~isS~~~~~~~~~~~~Y 182 (349)
+|||||......+.+.+ .+ +|++++++|+.++++++++++|.|++++ |+||++||..+..+.++...|
T Consensus 70 li~~ag~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 148 (242)
T 1uay_A 70 VVSAAGVGLAEKILGKE-GPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 148 (242)
T ss_dssp EEECCCCCCCCCSBCSS-SBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred EEEcccccCcccccccc-cccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchh
Confidence 99999998776666543 34 8999999999999999999999997643 499999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhh-cCCCCHHHHHHHHHHHHhc
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVH-VAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edvA~~i~~l~~~ 259 (349)
++||++++.++++++.|++++ |++++++||+++|++...... . .........+. .+..+|||+|+++++++++
T Consensus 149 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 223 (242)
T 1uay_A 149 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE---K-AKASLAAQVPFPPRLGRPEEYAALVLHILEN 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH---H-HHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccch---h-HHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence 999999999999999999887 999999999999998654211 0 01111112233 5678999999999999987
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=225.43 Aligned_cols=190 Identities=21% Similarity=0.246 Sum_probs=157.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc----------ccCCCcceeeec
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN----------KESKAVDHLVNT 117 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~----------~~~g~iDvlVnn 117 (349)
|+++||||+||||++++++|+++ +|++++|+++++++...++.. ..+.+|. ++++++|++|||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 73 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEEAGPLDLLVHA 73 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence 68999999999999999999999 999999998887776665531 5666772 114689999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLR 197 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la 197 (349)
||.....++.+. +.++|++++++|+.|++++++++. .++.|+||++||..+..+.++...|++||++++.++++++
T Consensus 74 ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~---~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~ 149 (207)
T 2yut_A 74 VGKAGRASVREA-GRDLVEEMLAAHLLTAAFVLKHAR---FQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAAR 149 (207)
T ss_dssp CCCCCCBCSCC----CHHHHHHHHHHHHHHHHHHHCC---EEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHH---hcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHH
Confidence 999877777665 458999999999999999999982 2344899999999999999999999999999999999999
Q ss_pred HHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 198 FELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 198 ~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
.|++++ |++++++||++.|++.... ..+..+..+|+|+|++++++++++..
T Consensus 150 ~~~~~~gi~v~~v~pg~v~t~~~~~~--------------~~~~~~~~~~~dva~~~~~~~~~~~~ 201 (207)
T 2yut_A 150 KELLREGVHLVLVRLPAVATGLWAPL--------------GGPPKGALSPEEAARKVLEGLFREPV 201 (207)
T ss_dssp HHHHTTTCEEEEECCCCBCSGGGGGG--------------TSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred HHHhhhCCEEEEEecCcccCCCcccc--------------CCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence 999887 9999999999999974321 11235788999999999999987654
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=223.75 Aligned_cols=189 Identities=16% Similarity=0.181 Sum_probs=150.8
Q ss_pred CC-EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCcc
Q 039397 47 DK-VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFF 125 (349)
Q Consensus 47 ~k-~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~ 125 (349)
+| +++||||+||||++++++|+ +|++|++++|+.+.. ..|+.+.. .+....+..|++|++|||||.....+
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~---~~D~~~~~----~~~~~~~~~~~~d~vi~~ag~~~~~~ 73 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDV---TVDITNID----SIKKMYEQVGKVDAIVSATGSATFSP 73 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSE---ECCTTCHH----HHHHHHHHHCCEEEEEECCCCCCCCC
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccce---eeecCCHH----HHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 44 79999999999999999999 999999999986410 00110000 00000122378999999999887777
Q ss_pred ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-e
Q 039397 126 FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-V 204 (349)
Q Consensus 126 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I 204 (349)
+.+. +.++|++++++|+.+++++++++.|.|++ +|+||++||..+..+.++...|+++|++++.+++.++.|+ ++ |
T Consensus 74 ~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi 150 (202)
T 3d7l_A 74 LTEL-TPEKNAVTISSKLGGQINLVLLGIDSLND-KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGI 150 (202)
T ss_dssp GGGC-CHHHHHHHHHTTTHHHHHHHHTTGGGEEE-EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC-STTC
T ss_pred hhhC-CHHHHHHHHhhccHHHHHHHHHHHHHhcc-CCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc-cCCe
Confidence 7665 46899999999999999999999999965 4899999999999999999999999999999999999999 55 9
Q ss_pred eEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 205 GITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 205 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
++++++||++.|++... ....+.....+++|+|+++++++++
T Consensus 151 ~v~~v~pg~v~~~~~~~-------------~~~~~~~~~~~~~dva~~~~~~~~~ 192 (202)
T 3d7l_A 151 RINTVSPNVLEESWDKL-------------EPFFEGFLPVPAAKVARAFEKSVFG 192 (202)
T ss_dssp EEEEEEECCBGGGHHHH-------------GGGSTTCCCBCHHHHHHHHHHHHHS
T ss_pred EEEEEecCccCCchhhh-------------hhhccccCCCCHHHHHHHHHHhhhc
Confidence 99999999999986421 0011234678999999999998854
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-29 Score=247.43 Aligned_cols=209 Identities=14% Similarity=0.072 Sum_probs=170.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCe-EEEE-ecCc-------------chhhhHHHHhcCCCCeEEEEEec------
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKAN-LVLV-ARRE-------------NRLQGSTIDEYNPINEVTLVSLN------ 104 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~-~r~~-------------~~l~~~~~~~~~~~~~~~~~~~d------ 104 (349)
++|++|||||+||||+++|++|+++|++ |+++ +|+. ++++++.+++...+.++.++.||
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 5799999999999999999999999997 7777 8983 45556666665456688999999
Q ss_pred -------cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccC
Q 039397 105 -------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLP 175 (349)
Q Consensus 105 -------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~ 175 (349)
..++|++|+||||||+...+.+.+. +.++|++++++|+.|++++.+++.+.|+++ .++||++||+++..+
T Consensus 330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~-~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g 408 (525)
T 3qp9_A 330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAAT-DADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG 408 (525)
T ss_dssp HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred HHHHHHHHHhcCCCcEEEECCcCCCCCchhhC-CHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence 2256899999999999988888876 568999999999999999999999999766 489999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHH
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~ 254 (349)
.++++.|+++|+++++|+ .+++.+ |++++|+||+++|+|.... . . ...........++|+++++.+.
T Consensus 409 ~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~-----~-~--~~~~~~~g~~~l~pee~a~~l~ 476 (525)
T 3qp9_A 409 GAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG-----A-T--GERLRRLGLRPLAPATALTALD 476 (525)
T ss_dssp CTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS-----H-H--HHHHHHTTBCCBCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch-----h-h--HHHHHhcCCCCCCHHHHHHHHH
Confidence 999999999999998875 456666 9999999999999987421 0 0 0111222346789999999999
Q ss_pred HHHhcCCceEEcC
Q 039397 255 SGACRGDTYVKFP 267 (349)
Q Consensus 255 ~l~~~~~~~i~~p 267 (349)
++++.+...+++.
T Consensus 477 ~~l~~~~~~v~v~ 489 (525)
T 3qp9_A 477 TALGHGDTAVTIA 489 (525)
T ss_dssp HHHHHTCSEEEEC
T ss_pred HHHhCCCCeEEEE
Confidence 9999998877654
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=270.62 Aligned_cols=210 Identities=14% Similarity=0.107 Sum_probs=166.4
Q ss_pred CCCCCCCEEEEeCCCch-HHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHh----cCCCCeEEEEEec-----------
Q 039397 42 SENMEDKVVIITGASSD-IGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDE----YNPINEVTLVSLN----------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~G-IG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~----~~~~~~~~~~~~d----------- 104 (349)
.++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++ ...+..+.++.+|
T Consensus 670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv 749 (1887)
T 2uv8_A 670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 749 (1887)
T ss_dssp CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence 34689999999999998 9999999999999999999 57777766554443 3335578888998
Q ss_pred ---ccc-----CC-CcceeeecCcCCCCc-cccccC-CcchHHHHHHhHhhhhHHHHHHh--ccccccCC-CeEEEEecc
Q 039397 105 ---NKE-----SK-AVDHLVNTASLGHTF-FFEEVT-DTSIFPRLLDINFWGNVYPTFVA--LPYLHESN-GRVVVNASV 170 (349)
Q Consensus 105 ---~~~-----~g-~iDvlVnnAg~~~~~-~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~--lp~m~~~~-g~IV~isS~ 170 (349)
.+. +| ++|+||||||+...+ ++.+.+ +.++|++++++|+.|++.+++++ +|.|++++ |+||++||.
T Consensus 750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ 829 (1887)
T 2uv8_A 750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN 829 (1887)
T ss_dssp HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence 233 55 899999999998777 777753 15889999999999999999988 89987665 899999999
Q ss_pred ccccCCCCchhhHHHHHHHHHH-HHHHHHHhcCCeeEEEEecCccc-CCCCCCccccccchhhhhHHHHhhhcCCCCHHH
Q 039397 171 ENWLPLPRMSLYASAKAALVTF-YESLRFELNDEVGITIATHGWIG-IEMTKGKFMLEDGAEMQWKEEREVHVAGGPVED 248 (349)
Q Consensus 171 ~~~~~~~~~~~Y~asKaal~~l-~~~la~el~~~I~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed 248 (349)
++..+ +...|++||+|+++| ++.++.|++++|+||+|+||+++ |+|.... +. .... ....+ .+..+|||
T Consensus 830 ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~----~~-~~~~-~~~~p-lr~~sPEE 900 (1887)
T 2uv8_A 830 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN----NI-IAEG-IEKMG-VRTFSQKE 900 (1887)
T ss_dssp TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C----CT-THHH-HHTTS-CCCEEHHH
T ss_pred HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc----hh-HHHH-HHhcC-CCCCCHHH
Confidence 99877 678999999999999 99999999877999999999999 8886531 00 0011 11111 25668999
Q ss_pred HHHHHHHHHhcC
Q 039397 249 FARLIVSGACRG 260 (349)
Q Consensus 249 vA~~i~~l~~~~ 260 (349)
+|+.+++++++.
T Consensus 901 VA~avlfLaSd~ 912 (1887)
T 2uv8_A 901 MAFNLLGLLTPE 912 (1887)
T ss_dssp HHHHHHGGGSHH
T ss_pred HHHHHHHHhCCC
Confidence 999999999876
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-30 Score=269.22 Aligned_cols=210 Identities=14% Similarity=0.130 Sum_probs=169.0
Q ss_pred CCCCCCCEEEEeCCCch-HHHHHHHHHHHcCCeEEEE-ecCcchhhhHHHHhcC----CCCeEEEEEec-----------
Q 039397 42 SENMEDKVVIITGASSD-IGEQIAYEYAKRKANLVLV-ARRENRLQGSTIDEYN----PINEVTLVSLN----------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~G-IG~ala~~la~~G~~Vv~~-~r~~~~l~~~~~~~~~----~~~~~~~~~~d----------- 104 (349)
.++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.. .+..+..+.+|
T Consensus 471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV 550 (1688)
T 2pff_A 471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 550 (1688)
T ss_dssp CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence 45689999999999998 9999999999999999998 6777777776666522 24578888888
Q ss_pred ---ccc-----CC-CcceeeecCcCCCCc-cccccC-CcchHHHHHHhHhhhhHHHHHHh--ccccccCC-CeEEEEecc
Q 039397 105 ---NKE-----SK-AVDHLVNTASLGHTF-FFEEVT-DTSIFPRLLDINFWGNVYPTFVA--LPYLHESN-GRVVVNASV 170 (349)
Q Consensus 105 ---~~~-----~g-~iDvlVnnAg~~~~~-~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~--lp~m~~~~-g~IV~isS~ 170 (349)
.+. +| ++|+||||||+...+ ++.+.+ +.++|++++++|+.|++.+++++ +|.|++++ |+||++||.
T Consensus 551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi 630 (1688)
T 2pff_A 551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN 630 (1688)
T ss_dssp HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence 233 56 899999999998776 666653 15889999999999999999998 88887765 899999999
Q ss_pred ccccCCCCchhhHHHHHHHHHH-HHHHHHHhcCCeeEEEEecCccc-CCCCCCccccccchhhhhHHHHhhhcCCCCHHH
Q 039397 171 ENWLPLPRMSLYASAKAALVTF-YESLRFELNDEVGITIATHGWIG-IEMTKGKFMLEDGAEMQWKEEREVHVAGGPVED 248 (349)
Q Consensus 171 ~~~~~~~~~~~Y~asKaal~~l-~~~la~el~~~I~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed 248 (349)
++..+ +...|++||+|+++| ++.++.|++++|+||+|+||+++ |+|...... .. ... ...+ .+..+|||
T Consensus 631 AG~~G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~--~~---~~l-~~ip-lR~~sPEE 701 (1688)
T 2pff_A 631 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNI--IA---EGI-EKMG-VRTFSQKE 701 (1688)
T ss_dssp TTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTT--CS---TTT-SSSS-CCCCCCCT
T ss_pred HhccC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchH--HH---HHH-HhCC-CCCCCHHH
Confidence 99877 678999999999999 78888888777999999999999 788653100 00 000 0111 15568999
Q ss_pred HHHHHHHHHhcC
Q 039397 249 FARLIVSGACRG 260 (349)
Q Consensus 249 vA~~i~~l~~~~ 260 (349)
+|+++++++++.
T Consensus 702 VA~aIlFLaSd~ 713 (1688)
T 2pff_A 702 MAFNLLGLLTPE 713 (1688)
T ss_dssp THHHHHHHTSTT
T ss_pred HHHHHHHHhCCC
Confidence 999999999887
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=264.45 Aligned_cols=211 Identities=13% Similarity=0.123 Sum_probs=166.1
Q ss_pred CCCCCCCEEEEeCCCch-HHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHH----hcCCCCeEEEEEec-----------
Q 039397 42 SENMEDKVVIITGASSD-IGEQIAYEYAKRKANLVLVA-RRENRLQGSTID----EYNPINEVTLVSLN----------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~G-IG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~----~~~~~~~~~~~~~d----------- 104 (349)
.++++||++|||||++| ||+++|++|+++|++|++++ |+.+++++..++ +...+..+.++.+|
T Consensus 647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv 726 (1878)
T 2uv9_A 647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV 726 (1878)
T ss_dssp CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence 44689999999999999 99999999999999999996 556665544433 33335678889999
Q ss_pred ---ccc---CC-CcceeeecCcCCCCc-cccccCC-cchHHHHHHhHhhhhHHHHHH--hccccccCC-CeEEEEecccc
Q 039397 105 ---NKE---SK-AVDHLVNTASLGHTF-FFEEVTD-TSIFPRLLDINFWGNVYPTFV--ALPYLHESN-GRVVVNASVEN 172 (349)
Q Consensus 105 ---~~~---~g-~iDvlVnnAg~~~~~-~~~~~~~-~~~~~~~~~vN~~g~~~l~~~--~lp~m~~~~-g~IV~isS~~~ 172 (349)
.+. +| ++|+||||||+...+ ++.+.+. .++|++++++|+.|++++++. ++|.|++++ |+||++||.++
T Consensus 727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag 806 (1878)
T 2uv9_A 727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG 806 (1878)
T ss_dssp HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred HHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence 234 77 899999999998776 6777531 589999999999999999987 778887665 89999999999
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHH-hcCCeeEEEEecCccc-CCCCCCccccccchhhhhHHHHhhhcCCCCHHHHH
Q 039397 173 WLPLPRMSLYASAKAALVTFYESLRFE-LNDEVGITIATHGWIG-IEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFA 250 (349)
Q Consensus 173 ~~~~~~~~~Y~asKaal~~l~~~la~e-l~~~I~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA 250 (349)
..+ +...|++||+|+++|++.++.+ ++++|+||+|+||+++ |+|.... . ... ........+..+|||+|
T Consensus 807 ~~g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~-----~-~~~-~~~~~~plr~~sPeEVA 877 (1878)
T 2uv9_A 807 TFG--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN-----N-LVA-EGVEKLGVRTFSQQEMA 877 (1878)
T ss_dssp SSS--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH-----H-HTH-HHHHTTTCCCBCHHHHH
T ss_pred ccC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc-----h-hhH-HHHHhcCCCCCCHHHHH
Confidence 877 5789999999999999877665 6666999999999999 9986531 0 000 01111112566999999
Q ss_pred HHHHHHHhcCC
Q 039397 251 RLIVSGACRGD 261 (349)
Q Consensus 251 ~~i~~l~~~~~ 261 (349)
+.+++++++..
T Consensus 878 ~avlfLaSd~a 888 (1878)
T 2uv9_A 878 FNLLGLMAPAI 888 (1878)
T ss_dssp HHHHHHHSHHH
T ss_pred HHHHHHhCCcc
Confidence 99999998754
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=223.41 Aligned_cols=199 Identities=16% Similarity=0.110 Sum_probs=149.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh-HHHHhcCCCCeEEEEEecccc-CCCcceeeecCcCCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPINEVTLVSLNNKE-SKAVDHLVNTASLGHTFF 125 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~-~~~~~~~~~~~~~~~~~d~~~-~g~iDvlVnnAg~~~~~~ 125 (349)
|++|||||+||||++++++|+++|++|++++|+.++++. ...++.+... +..-.++ .+++|+||||||....
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~----~~~~~~~~~~~~d~vi~~Ag~~~~-- 75 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETA----VAAVLDRCGGVLDGLVCCAGVGVT-- 75 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHH----HHHHHHHHTTCCSEEEECCCCCTT--
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHH----HHHHHHHcCCCccEEEECCCCCCc--
Confidence 689999999999999999999999999999998765432 0011100000 0000112 2689999999997531
Q ss_pred ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCC--------------------------CC
Q 039397 126 FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPL--------------------------PR 178 (349)
Q Consensus 126 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~--------------------------~~ 178 (349)
.+.+++++++|+.|++++++++++.|++++ ++||++||..++.+. ++
T Consensus 76 ------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (255)
T 2dkn_A 76 ------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQT 149 (255)
T ss_dssp ------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCH
T ss_pred ------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCc
Confidence 245889999999999999999999997654 899999999988665 56
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHh-hhcCCCCHHHHHHHHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEERE-VHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~edvA~~i~~l 256 (349)
...|++||++++.+++.++.|+++. +++++++||++.|++......... ......... +..+..+++|+|++++++
T Consensus 150 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l 227 (255)
T 2dkn_A 150 HLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPR--YGESTRRFVAPLGRGSEPREVAEAIAFL 227 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTT--THHHHHSCCCTTSSCBCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchh--hHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 7889999999999999999999776 999999999999997643211100 001001000 445688999999999999
Q ss_pred HhcC
Q 039397 257 ACRG 260 (349)
Q Consensus 257 ~~~~ 260 (349)
++++
T Consensus 228 ~~~~ 231 (255)
T 2dkn_A 228 LGPQ 231 (255)
T ss_dssp HSGG
T ss_pred hCCC
Confidence 9875
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=268.45 Aligned_cols=211 Identities=15% Similarity=0.096 Sum_probs=157.8
Q ss_pred CCCCCCEEEEeCCCch-HHHHHHHHHHHcCCeEEEEecCcch-----hhhHHHHhcCCCCeEEEEEec------------
Q 039397 43 ENMEDKVVIITGASSD-IGEQIAYEYAKRKANLVLVARRENR-----LQGSTIDEYNPINEVTLVSLN------------ 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~G-IG~ala~~la~~G~~Vv~~~r~~~~-----l~~~~~~~~~~~~~~~~~~~d------------ 104 (349)
..++||++|||||++| ||+++|+.|+++|++|++++|+.++ ++++.+++...+..+..+.+|
T Consensus 2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D 2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence 3589999999999999 9999999999999999999999877 666667776556678888888
Q ss_pred --cc----cCCCcceeeecCcC----CCC-ccccccCCcchHHHH----HHhHhhhhHHHHHHhccccccCC-C---e-E
Q 039397 105 --NK----ESKAVDHLVNTASL----GHT-FFFEEVTDTSIFPRL----LDINFWGNVYPTFVALPYLHESN-G---R-V 164 (349)
Q Consensus 105 --~~----~~g~iDvlVnnAg~----~~~-~~~~~~~~~~~~~~~----~~vN~~g~~~l~~~~lp~m~~~~-g---~-I 164 (349)
.+ .+|++|+||||||+ ... ....+. +.++|++. +++|+.+++.+++++.|.|++++ + . |
T Consensus 2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~-~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D 2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAG-DMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCC-TTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHhhhhhhcCCCCEEEECCCcccccCcccccccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence 23 67999999999998 211 122222 23445444 99999999999999999997544 2 2 3
Q ss_pred EEEeccccccCCCCchhhHHHHHHHHHHHHHHHHH--hcCCeeEEEEecCccc-CCCCCCccccccchhhhhHHHHhhhc
Q 039397 165 VVNASVENWLPLPRMSLYASAKAALVTFYESLRFE--LNDEVGITIATHGWIG-IEMTKGKFMLEDGAEMQWKEEREVHV 241 (349)
Q Consensus 165 V~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e--l~~~I~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (349)
++.||..+. .++..+|++||+|+++|+++|+.| ++++|+||+++||+|+ |++..... . .. ........
T Consensus 2291 ~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~----~-~~--~~~~~~~~ 2361 (3089)
T 3zen_D 2291 LPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQND----A-IV--SAVEEAGV 2361 (3089)
T ss_dssp EEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTT----T-TH--HHHGGGSC
T ss_pred EECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccch----h-HH--HHHHhcCC
Confidence 333433332 335668999999999999999999 7766999999999999 77654311 0 00 01111223
Q ss_pred CCCCHHHHHHHHHHHHhcCCce
Q 039397 242 AGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 242 ~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+..+|||+|+++++|+++..++
T Consensus 2362 r~~~PeEIA~avlfLaS~~a~~ 2383 (3089)
T 3zen_D 2362 TTYTTDEMAAMLLDLCTVETKV 2383 (3089)
T ss_dssp BCEEHHHHHHHHHHTTSHHHHH
T ss_pred CCCCHHHHHHHHHHHhChhhhh
Confidence 4558999999999999987554
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=225.61 Aligned_cols=206 Identities=16% Similarity=0.053 Sum_probs=161.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcc---hhhhHHHHhcCCCCeEEEEEec-------------cccCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARREN---RLQGSTIDEYNPINEVTLVSLN-------------NKESK 109 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~---~l~~~~~~~~~~~~~~~~~~~d-------------~~~~g 109 (349)
+|++|||||+||||+++|++|+++|+ +|++++|+.. ..+++.+++...+.++.++.|| ..+.+
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 48999999999999999999999999 8999999753 3445555665556788999999 12237
Q ss_pred CcceeeecCcCC-CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLG-HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+. ....+.+. +.++|++++++|+.|++++.+.+.+.+ .++||++||+++..+.+++..|+++|++
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~-t~e~~~~vl~~nv~g~~~L~~~~~~~~---~~~iV~~SS~a~~~g~~g~~~YaAaKa~ 394 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADL-TLGQLDALMRAKLTAARHLHELTADLD---LDAFVLFSSGAAVWGSGGQPGYAAANAY 394 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTC-CHHHHHHHHHTTHHHHHHHHHHHTTSC---CSEEEEEEEHHHHTTCTTCHHHHHHHHH
T ss_pred CCeEEEECCcccCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHhhccC---CCEEEEEeChHhcCCCCCcHHHHHHHHH
Confidence 899999999998 66677776 568999999999999999999988763 4799999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 189 LVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 189 l~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+++|++.++. ..|++++|+||++.+....... . . ...........++|+++++.+.+++..+...+.+
T Consensus 395 ldala~~~~~---~Gi~v~sV~pG~w~~~gm~~~~----~-~--~~~l~~~g~~~l~pe~~~~~l~~~l~~~~~~~~v 462 (496)
T 3mje_A 395 LDALAEHRRS---LGLTASSVAWGTWGEVGMATDP----E-V--HDRLVRQGVLAMEPEHALGALDQMLENDDTAAAI 462 (496)
T ss_dssp HHHHHHHHHH---TTCCCEEEEECEESSSCC-------------CHHHHHTTEEEECHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHh---cCCeEEEEECCcccCCccccCh----H-H--HHHHHhcCCCCCCHHHHHHHHHHHHcCCCceEEE
Confidence 9999886652 1299999999998765433210 0 0 0111122234579999999999999988776544
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-26 Score=235.61 Aligned_cols=204 Identities=18% Similarity=0.141 Sum_probs=164.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCC-eEEEEecCc---chhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYA-KRKA-NLVLVARRE---NRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la-~~G~-~Vv~~~r~~---~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
.+|+++||||++|||+++|+.|+ ++|+ +|++++|+. ++.++..+++...+.++..+.|| .+
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 57999999999999999999999 7999 599999994 44555666665556789999999 22
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
.+ ++|+||||||+.....+.+. +.++|++++++|+.|++++.+++.|.| +||++||+++..+.++++.|+++|
T Consensus 609 ~~-~id~lVnnAGv~~~~~~~~~-t~e~~~~~~~~nv~G~~~l~~~~~~~l-----~iV~~SS~ag~~g~~g~~~YaAak 681 (795)
T 3slk_A 609 EH-PLTAVVHAAGVLDDGVSESL-TVERLDQVLRPKVDGARNLLELIDPDV-----ALVLFSSVSGVLGSGGQGNYAAAN 681 (795)
T ss_dssp TS-CEEEEEECCCCCCCCCGGGC-CHHHHHHHHCCCCCHHHHHHHHSCTTS-----EEEEEEETHHHHTCSSCHHHHHHH
T ss_pred hC-CCEEEEECCCcCCCCchhhC-CHHHHHHHHHHHHHHHHHHHHHHhhCC-----EEEEEccHHhcCCCCCCHHHHHHH
Confidence 33 89999999999988888887 469999999999999999999999888 799999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+ |+++|+.|++.+ |++|+|+||+++|++...... ..............+++++..+.+..++..+...+.
T Consensus 682 a----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~-----~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~~~~~ 752 (795)
T 3slk_A 682 S----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLR-----EAEQDRLARSGLLPISTEEGLSQFDAACGGAHTVVA 752 (795)
T ss_dssp H----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHH-----HHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSCSSCC
T ss_pred H----HHHHHHHHHHHcCCeEEEEECCeECcchhhcccc-----HHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCCcEEE
Confidence 6 666666777767 999999999999876432110 111111222334678899999999999988776543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.3e-25 Score=214.20 Aligned_cols=206 Identities=20% Similarity=0.168 Sum_probs=166.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcc---hhhhHHHHhcCCCCeEEEEEecccc---------CCCcc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARREN---RLQGSTIDEYNPINEVTLVSLNNKE---------SKAVD 112 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~---~l~~~~~~~~~~~~~~~~~~~d~~~---------~g~iD 112 (349)
.+|++|||||+||||++++++|+++|+ +|++++|+.. .+++..+++...+.++.++.||..+ .+++|
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld 337 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN 337 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence 579999999999999999999999999 6999999874 3445555665556688899999211 16899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTF 192 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 192 (349)
+||||||+.....+.+. +.+++++++++|+.|++++.+.+.+. +..++||++||+++..+.+++..|+++|+++++|
T Consensus 338 ~VVh~AGv~~~~~~~~~-~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~l 414 (511)
T 2z5l_A 338 AVFHTAGILDDAVIDTL-SPESFETVRGAKVCGAELLHQLTADI--KGLDAFVLFSSVTGTWGNAGQGAYAAANAALDAL 414 (511)
T ss_dssp EEEECCCCCCCBCGGGC-CHHHHHHHHHHHHHHHHHHHHHTSSC--TTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCcccCCcccccC-CHHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHH
Confidence 99999999888777776 46899999999999999999987654 2447999999999999999999999999999999
Q ss_pred HHHHHHHhcCC-eeEEEEecCcc-cCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcC
Q 039397 193 YESLRFELNDE-VGITIATHGWI-GIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFP 267 (349)
Q Consensus 193 ~~~la~el~~~-I~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p 267 (349)
++.++ .. +++++|+||++ +|+|..... . ..........++++++++.+..++.++...+.+.
T Consensus 415 a~~~~----~~gi~v~sv~pG~~~~tgm~~~~~------~---~~~~~~g~~~l~~e~~a~~l~~al~~~~~~v~v~ 478 (511)
T 2z5l_A 415 AERRR----AAGLPATSVAWGLWGGGGMAAGAG------E---ESLSRRGLRAMDPDAAVDALLGAMGRNDVCVTVV 478 (511)
T ss_dssp HHHHH----TTTCCCEEEEECCBCSTTCCCCHH------H---HHHHHHTBCCBCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHH----HcCCcEEEEECCcccCCccccccc------H---HHHHhcCCCCCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 98764 33 89999999999 788765320 0 0111223467899999999999999988876653
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=201.26 Aligned_cols=178 Identities=17% Similarity=0.081 Sum_probs=145.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------cCCCcceeeec
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------ESKAVDHLVNT 117 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~g~iDvlVnn 117 (349)
|++|+|+||||+||||++++++|+++|++|++++|++.+.+ ...+..+.+|.. ...++|+||||
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 71 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVAGCDGIVHL 71 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence 35689999999999999999999999999999999976543 345777888832 23579999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc------------cCCCCchhhHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW------------LPLPRMSLYASA 185 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~------------~~~~~~~~Y~as 185 (349)
||.. ..+.|++++++|+.|++++++++.+. +.++||++||.+++ .+.+....|++|
T Consensus 72 Ag~~---------~~~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~s 139 (267)
T 3rft_A 72 GGIS---------VEKPFEQILQGNIIGLYNLYEAARAH---GQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVS 139 (267)
T ss_dssp CSCC---------SCCCHHHHHHHHTHHHHHHHHHHHHT---TCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHH
T ss_pred CCCc---------CcCCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHH
Confidence 9983 23678999999999999999999542 44899999999887 344566889999
Q ss_pred HHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 186 KAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
|++++.+++.++.+++ ++++++.||.+.+++.... ....+++++|+++.+..++..+.
T Consensus 140 K~~~e~~~~~~a~~~g--~~~~~vr~~~v~~~~~~~~----------------~~~~~~~~~d~a~~~~~~~~~~~ 197 (267)
T 3rft_A 140 KCFGENLARMYFDKFG--QETALVRIGSCTPEPNNYR----------------MLSTWFSHDDFVSLIEAVFRAPV 197 (267)
T ss_dssp HHHHHHHHHHHHHHHC--CCEEEEEECBCSSSCCSTT----------------HHHHBCCHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHhC--CeEEEEEeecccCCCCCCC----------------ceeeEEcHHHHHHHHHHHHhCCC
Confidence 9999999999998875 6889999999888754321 11246789999999999998764
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.7e-25 Score=194.47 Aligned_cols=187 Identities=18% Similarity=0.159 Sum_probs=145.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeE-EEEEecc-----ccCCCcceee
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEV-TLVSLNN-----KESKAVDHLV 115 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~-~~~~~d~-----~~~g~iDvlV 115 (349)
..+++||+++||||+||||++++++|+++|++|++++|+.+++++.... .+ ..+.+|. +.++++|++|
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER------GASDIVVANLEEDFSHAFASIDAVV 89 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT------TCSEEEECCTTSCCGGGGTTCSEEE
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC------CCceEEEcccHHHHHHHHcCCCEEE
Confidence 3578899999999999999999999999999999999998887654432 34 6667773 4567899999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC---CCchhhHHHHHHHHHH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL---PRMSLYASAKAALVTF 192 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~---~~~~~Y~asKaal~~l 192 (349)
||||... .+++++.+++|+.++.++++++... +.++||++||..+..+. +....|+++|++++.+
T Consensus 90 ~~ag~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~ 157 (236)
T 3e8x_A 90 FAAGSGP---------HTGADKTILIDLWGAIKTIQEAEKR---GIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDE 157 (236)
T ss_dssp ECCCCCT---------TSCHHHHHHTTTHHHHHHHHHHHHH---TCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHH
T ss_pred ECCCCCC---------CCCccccchhhHHHHHHHHHHHHHc---CCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHH
Confidence 9999752 2568899999999999999998532 34799999998877664 5678999999999998
Q ss_pred HHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 193 YESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 193 ~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.+ ...+++++++||++.++........... .......++++|+|++++++++++
T Consensus 158 ~~------~~gi~~~~lrpg~v~~~~~~~~~~~~~~--------~~~~~~~i~~~Dva~~~~~~~~~~ 211 (236)
T 3e8x_A 158 LK------RSSLDYTIVRPGPLSNEESTGKVTVSPH--------FSEITRSITRHDVAKVIAELVDQQ 211 (236)
T ss_dssp HH------HSSSEEEEEEECSEECSCCCSEEEEESS--------CSCCCCCEEHHHHHHHHHHHTTCG
T ss_pred HH------HCCCCEEEEeCCcccCCCCCCeEEeccC--------CCcccCcEeHHHHHHHHHHHhcCc
Confidence 76 2239999999999999876543221110 111246788999999999999876
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.7e-25 Score=213.88 Aligned_cols=204 Identities=18% Similarity=0.135 Sum_probs=158.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCcch---hhhHHHHhcCCCCeEEEEEec-------------cccC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKAN-LVLVARRENR---LQGSTIDEYNPINEVTLVSLN-------------NKES 108 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~~~---l~~~~~~~~~~~~~~~~~~~d-------------~~~~ 108 (349)
.++++|||||+||||++++++|+++|++ |++++|+... ++++..++...+.++.++.+| ...+
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 5799999999999999999999999995 9999998753 444555554445678888998 2335
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
+++|++|||||+...+.+.+. +.+++++++++|+.|++++.+++.+. +.++||++||+++..+.+++..|+++|++
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~-~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~V~~SS~a~~~g~~g~~~Yaaaka~ 380 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTL-TGERIERASRAKVLGARNLHELTREL---DLTAFVLFSSFASAFGAPGLGGYAPGNAY 380 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGC-CHHHHHHHTHHHHHHHHHHHHHHTTS---CCSEEEEEEEHHHHTCCTTCTTTHHHHHH
T ss_pred CCCcEEEECCccCCCCccccC-CHHHHHHHHHHHHHHHHHHHHHhCcC---CCCEEEEEcChHhcCCCCCCHHHHHHHHH
Confidence 789999999999887777776 56899999999999999999988653 45899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeeEEEEecCcccCC-CCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 189 LVTFYESLRFELNDEVGITIATHGWIGIE-MTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 189 l~~l~~~la~el~~~I~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++|++.++. ..+++++|+||++.++ |...... ..........++++++++.+..++..+...+.
T Consensus 381 l~~la~~~~~---~gi~v~~i~pG~~~~~gm~~~~~~---------~~~~~~g~~~i~~e~~a~~l~~~l~~~~~~~~ 446 (486)
T 2fr1_A 381 LDGLAQQRRS---DGLPATAVAWGTWAGSGMAEGPVA---------DRFRRHGVIEMPPETACRALQNALDRAEVCPI 446 (486)
T ss_dssp HHHHHHHHHH---TTCCCEEEEECCBC---------------------CTTTTEECBCHHHHHHHHHHHHHTTCSSCE
T ss_pred HHHHHHHHHh---cCCeEEEEECCeeCCCcccchhHH---------HHHHhcCCCCCCHHHHHHHHHHHHhCCCCeEE
Confidence 9998776542 1289999999999876 4322100 00011223578999999999999998766443
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=191.13 Aligned_cols=190 Identities=14% Similarity=0.059 Sum_probs=140.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlV 115 (349)
|++|+++||||+||||++++++|+++|+ +|++++|+++++++... ..+..+.+|. +...++|++|
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~~d~vi 89 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY------KNVNQEVVDFEKLDDYASAFQGHDVGF 89 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG------GGCEEEECCGGGGGGGGGGGSSCSEEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc------CCceEEecCcCCHHHHHHHhcCCCEEE
Confidence 5689999999999999999999999999 99999999876654321 1456677772 2345799999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYES 195 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~ 195 (349)
||||.... .+.+++.+++|+.++.++++++.+. +.++||++||.+++.+ ....|+++|++++.+++.
T Consensus 90 ~~ag~~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~---~~~~iv~~SS~~~~~~--~~~~Y~~sK~~~e~~~~~ 156 (242)
T 2bka_A 90 CCLGTTRG--------KAGAEGFVRVDRDYVLKSAELAKAG---GCKHFNLLSSKGADKS--SNFLYLQVKGEVEAKVEE 156 (242)
T ss_dssp ECCCCCHH--------HHHHHHHHHHHTHHHHHHHHHHHHT---TCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHHT
T ss_pred ECCCcccc--------cCCcccceeeeHHHHHHHHHHHHHC---CCCEEEEEccCcCCCC--CcchHHHHHHHHHHHHHh
Confidence 99997422 1346789999999999999886542 3479999999887653 456899999999999876
Q ss_pred HHHHhcCCe-eEEEEecCcccCCCCCCccccccchhhhhHHHHhh----hcCCCCHHHHHHHHHHHHhcCCc
Q 039397 196 LRFELNDEV-GITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREV----HVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 196 la~el~~~I-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++ + ++++++||++.|++...... .. .........+ ..+.++++|+|++++++++++..
T Consensus 157 ~~------~~~~~~vrpg~v~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~ 219 (242)
T 2bka_A 157 LK------FDRYSVFRPGVLLCDRQESRPG--EW-LVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD 219 (242)
T ss_dssp TC------CSEEEEEECCEEECTTGGGSHH--HH-HHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred cC------CCCeEEEcCceecCCCCCCcHH--HH-HHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence 42 4 79999999999986432110 00 0000000011 34578899999999999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=193.85 Aligned_cols=210 Identities=12% Similarity=-0.001 Sum_probs=151.6
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEE-Eecc-------ccCCCc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLV-SLNN-------KESKAV 111 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~-~~d~-------~~~g~i 111 (349)
|...+++|+||||||+|+||++++++|+++|++|++++|+.++.+.+...+.. ....+..+ .+|. +...++
T Consensus 5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 84 (342)
T 1y1p_A 5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred cccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCC
Confidence 34467889999999999999999999999999999999998776554433311 11356666 6773 223478
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-CC--------------
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-PL-------------- 176 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-~~-------------- 176 (349)
|++|||||..... +++++.+++|+.|+.++++++.+. .+.++||++||.+++. +.
T Consensus 85 d~vih~A~~~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~ 154 (342)
T 1y1p_A 85 AGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAAT--PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWN 154 (342)
T ss_dssp SEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHTC--TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCC
T ss_pred CEEEEeCCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHhC--CCCcEEEEeccHHHhcCCCCCCCCcccCccccC
Confidence 9999999975421 346789999999999999999763 2347999999987752 21
Q ss_pred ----------------CCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc-ccchhhh-hHH---
Q 039397 177 ----------------PRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML-EDGAEMQ-WKE--- 235 (349)
Q Consensus 177 ----------------~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~-~~~~~~~-~~~--- 235 (349)
.....|++||++.+.+++.++.+++..+++++++||.+.++........ .-..... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~ 234 (342)
T 1y1p_A 155 LESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEV 234 (342)
T ss_dssp HHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCC
T ss_pred chhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCC
Confidence 1236799999999999999999987568999999999999875432110 0000000 000
Q ss_pred ---HH-hhhcCCCCHHHHHHHHHHHHhcC
Q 039397 236 ---ER-EVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 236 ---~~-~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.. ......+.++|+|++++.++++.
T Consensus 235 ~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 263 (342)
T 1y1p_A 235 SPALALMPPQYYVSAVDIGLLHLGCLVLP 263 (342)
T ss_dssp CHHHHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred ccccccCCcCCEeEHHHHHHHHHHHHcCc
Confidence 00 02235678999999999999764
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=178.08 Aligned_cols=174 Identities=14% Similarity=0.114 Sum_probs=130.3
Q ss_pred CEEEEeCCCchHHHHHHHHHH-HcCCeEEEEecCcc-hhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYA-KRKANLVLVARREN-RLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la-~~G~~Vv~~~r~~~-~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnA 118 (349)
|+++||||+||||++++++|+ ++|++|++++|+++ +++++.. ....+..+.+|. +...++|++||||
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~a 81 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII----DHERVTVIEGSFQNPGXLEQAVTNAEVVFVGA 81 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH----TSTTEEEEECCTTCHHHHHHHHTTCSEEEESC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc----CCCceEEEECCCCCHHHHHHHHcCCCEEEEcC
Confidence 789999999999999999999 89999999999988 7665431 134677888883 2345789999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCch----------hhHHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMS----------LYASAKA 187 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~----------~Y~asKa 187 (349)
|.. |+. ++.+++.|++.+ ++||++||..++.+.+... .|+++|.
T Consensus 82 g~~--------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (221)
T 3r6d_A 82 MES--------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGER 136 (221)
T ss_dssp CCC--------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHH
T ss_pred CCC--------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHH
Confidence 852 222 777777776655 7999999999887766554 8999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHH--hcCCce
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGA--CRGDTY 263 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~--~~~~~~ 263 (349)
+++.+.+. ..+++++++||++.++........... ........++++|+|+++++++ ++.+.+
T Consensus 137 ~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~ 201 (221)
T 3r6d_A 137 QARNVLRE------SNLNYTILRLTWLYNDPEXTDYELIPE-------GAQFNDAQVSREAVVKAIFDILHAADETPF 201 (221)
T ss_dssp HHHHHHHH------SCSEEEEEEECEEECCTTCCCCEEECT-------TSCCCCCEEEHHHHHHHHHHHHTCSCCGGG
T ss_pred HHHHHHHh------CCCCEEEEechhhcCCCCCcceeeccC-------CccCCCceeeHHHHHHHHHHHHHhcChhhh
Confidence 99988764 238999999999988733222111110 0111223678899999999999 776543
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-24 Score=200.08 Aligned_cols=281 Identities=9% Similarity=0.035 Sum_probs=173.7
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------cCC--C
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------ESK--A 110 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~g--~ 110 (349)
..++++++|+||||||+|+||++++++|+++|++|++++|+.+...+...++ ..+..+.+|.. ... +
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~~ 88 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSFK 88 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhcC
Confidence 3456889999999999999999999999999999999999765433221111 35677788832 123 7
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----C------Cc
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----P------RM 179 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----~------~~ 179 (349)
+|++|||||..... ..++++ +++|+.|+.++++++.. .+.++||++||.+.+.+. + ..
T Consensus 89 ~D~vih~A~~~~~~------~~~~~~--~~~N~~~~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~ 157 (330)
T 2pzm_A 89 PTHVVHSAAAYKDP------DDWAED--AATNVQGSINVAKAASK---AGVKRLLNFQTALCYGRPATVPIPIDSPTAPF 157 (330)
T ss_dssp CSEEEECCCCCSCT------TCHHHH--HHHHTHHHHHHHHHHHH---HTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCC
T ss_pred CCEEEECCccCCCc------cccChh--HHHHHHHHHHHHHHHHH---cCCCEEEEecCHHHhCCCccCCCCcCCCCCCC
Confidence 99999999976432 124555 99999999999999974 234799999999876443 2 56
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-ee-EEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHH-HHHHH
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VG-ITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFAR-LIVSG 256 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~-v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~-~i~~l 256 (349)
..|+++|++++.+++.+ ++... +| ++++.||. .|++............ ....... ....+.++|+|+ +++++
T Consensus 158 ~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a~~~~ 232 (330)
T 2pzm_A 158 TSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIADLSL 232 (330)
T ss_dssp SHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHHHHHH
Confidence 78999999999999887 44333 66 56666774 3333211000000000 0000001 345688999999 99999
Q ss_pred HhcCC-ceEEcC--chHHHHHHHHHhchHHHHHHHHHhccccCCCccccCCCCCCcccCCCC-----CC-CccC-CCCce
Q 039397 257 ACRGD-TYVKFP--SWYDVFLLYRVFAPHVLNWTFRLLISSEGARRTSLIGTGRPLLEGPPA-----RP-RLEG-TSPRQ 326 (349)
Q Consensus 257 ~~~~~-~~i~~p--~~~~~~~~~~~~~P~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~-~s~~~ 326 (349)
++++. ..++.. ..... -++.+.+.+.+...................|..+. +. ++.| .++++
T Consensus 233 ~~~~~g~~~~v~~~~~~s~--------~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~ 304 (330)
T 2pzm_A 233 QEGRPTGVFNVSTGEGHSI--------KEVFDVVLDYVGATLAEPVPVVAPGADDVPSVVLDPSKTETEFGWKAKVDFKD 304 (330)
T ss_dssp STTCCCEEEEESCSCCEEH--------HHHHHHHHHHHTCCCSSCCCEECCCTTSCSEECBCCHHHHHHHCCCCCCCHHH
T ss_pred hhcCCCCEEEeCCCCCCCH--------HHHHHHHHHHhCCCCceeCCCCcchhhccCCHHHHhhchHHHcCCcccCCHHH
Confidence 98743 222221 11111 12222222222221000000000112233444443 21 2335 48899
Q ss_pred eccCcccccccCCCCCCCCCCC
Q 039397 327 VLSSPSSFFSQYSPSSSFSQYS 348 (349)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~ 348 (349)
.+.+...++.+++.-..|+..+
T Consensus 305 ~l~~~~~~~~~~~~~~~~~~~~ 326 (330)
T 2pzm_A 305 TITGQLAWYDKYGVTDIFSHLS 326 (330)
T ss_dssp HHHHHHHHHHHHCSCSCCCSSC
T ss_pred HHHHHHHHHHhhCcccccCcCC
Confidence 9999999999988888877653
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=183.24 Aligned_cols=203 Identities=11% Similarity=0.104 Sum_probs=153.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHc-CC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKR-KA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVD 112 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~-G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iD 112 (349)
...+++|+||||||+|+||++++++|+++ |+ +|++++|++.+.+.....+.. ..+..+.+|. +...++|
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~D 93 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND--PRMRFFIGDVRDLERLNYALEGVD 93 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC--TTEEEEECCTTCHHHHHHHTTTCS
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC--CCEEEEECCCCCHHHHHHHHhcCC
Confidence 34578999999999999999999999999 98 999999998887766665542 4577788882 3345799
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTF 192 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 192 (349)
++|||||....... ..+..+.+++|+.|+.++++++.+. +.++||++||..+..| ...|++||++++.+
T Consensus 94 ~Vih~Aa~~~~~~~-----~~~~~~~~~~Nv~gt~~l~~aa~~~---~v~~~V~~SS~~~~~p---~~~Y~~sK~~~E~~ 162 (344)
T 2gn4_A 94 ICIHAAALKHVPIA-----EYNPLECIKTNIMGASNVINACLKN---AISQVIALSTDKAANP---INLYGATKLCSDKL 162 (344)
T ss_dssp EEEECCCCCCHHHH-----HHSHHHHHHHHHHHHHHHHHHHHHT---TCSEEEEECCGGGSSC---CSHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCch-----hcCHHHHHHHHHHHHHHHHHHHHhC---CCCEEEEecCCccCCC---ccHHHHHHHHHHHH
Confidence 99999997642211 1234689999999999999999875 3479999999877644 47899999999999
Q ss_pred HHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHH--------HhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 193 YESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE--------REVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 193 ~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+++++.+++.. ++++++.||.+.++...- .... ....... .......++++|+|++++.++++..
T Consensus 163 ~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~-i~~~---~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~ 236 (344)
T 2gn4_A 163 FVSANNFKGSSQTQFSVVRYGNVVGSRGSV-VPFF---KKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH 236 (344)
T ss_dssp HHHGGGCCCSSCCEEEEECCCEETTCTTSH-HHHH---HHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCcEEEEEEeccEECCCCCH-HHHH---HHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhcc
Confidence 99999888766 999999999998875221 0000 0000000 0111236789999999999998653
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=186.65 Aligned_cols=209 Identities=14% Similarity=0.016 Sum_probs=143.9
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh-HHHHhcCCCCeEEEEEecccc-------CC--Cccee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPINEVTLVSLNNKE-------SK--AVDHL 114 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~-~~~~~~~~~~~~~~~~~d~~~-------~g--~iDvl 114 (349)
|++|+||||||+|+||++++++|+++|++|++++|+.++.+. ...++. ....+..+.+|..+ .. ++|++
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 79 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQPDEV 79 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 467899999999999999999999999999999998776532 112221 12356777777321 11 57999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-----------cCCCCchhhH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-----------LPLPRMSLYA 183 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-----------~~~~~~~~Y~ 183 (349)
|||||.... +. +.++++..+++|+.|+.++++++.+. ..+++||++||.+.+ .+.+....|+
T Consensus 80 ih~A~~~~~----~~-~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~ 152 (345)
T 2z1m_A 80 YNLAAQSFV----GV-SFEQPILTAEVDAIGVLRILEALRTV--KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYA 152 (345)
T ss_dssp EECCCCCCH----HH-HTTSHHHHHHHHTHHHHHHHHHHHHH--CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred EECCCCcch----hh-hhhCHHHHHHHHHHHHHHHHHHHHHh--CCCceEEEEechhhcCCCCCCCCCccCCCCCCChhH
Confidence 999997532 11 23568899999999999999999853 113799999998653 2344567899
Q ss_pred HHHHHHHHHHHHHHHHhcCC----eeEEEEecCcccCCCCCCccccc----cchhhh-hHHHHhhhcCCCCHHHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDE----VGITIATHGWIGIEMTKGKFMLE----DGAEMQ-WKEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~----I~v~~v~PG~v~T~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~edvA~~i~ 254 (349)
+||++.+.+++.++.+++-. +.++.+.||...|.+........ .+.... ...........+.++|+|++++
T Consensus 153 ~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~ 232 (345)
T 2z1m_A 153 VAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMW 232 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHH
Confidence 99999999999999988632 56677888887776422100000 000000 0000111234788999999999
Q ss_pred HHHhcCC
Q 039397 255 SGACRGD 261 (349)
Q Consensus 255 ~l~~~~~ 261 (349)
++++++.
T Consensus 233 ~~~~~~~ 239 (345)
T 2z1m_A 233 LMMQQPE 239 (345)
T ss_dssp HHHTSSS
T ss_pred HHHhCCC
Confidence 9998754
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=181.56 Aligned_cols=202 Identities=16% Similarity=0.010 Sum_probs=143.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcc--hhhhHHHHhcCCCCeEEEEEeccc-------cCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARREN--RLQGSTIDEYNPINEVTLVSLNNK-------ESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~--~l~~~~~~~~~~~~~~~~~~~d~~-------~~g~iDvl 114 (349)
++++||||||+|+||++++++|+++| ++|++++|+.. ..+.+ .++.. ...+..+.+|.. ..+++|++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v 79 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED-DPRYTFVKGDVADYELVKELVRKVDGV 79 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT-CTTEEEEECCTTCHHHHHHHHHTCSEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc-CCceEEEEcCCCCHHHHHHHhhCCCEE
Confidence 35679999999999999999999997 89999999752 22222 12211 345777888832 23579999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCCCchhhH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLPRMSLYA 183 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~~~~~Y~ 183 (349)
|||||..... . +.++++..+++|+.|+.++++++.+. +..++||++||.+.+. +.+....|+
T Consensus 80 ih~A~~~~~~----~-~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~ 152 (336)
T 2hun_A 80 VHLAAESHVD----R-SISSPEIFLHSNVIGTYTLLESIRRE--NPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYS 152 (336)
T ss_dssp EECCCCCCHH----H-HHHCTHHHHHHHHHHHHHHHHHHHHH--CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHH
T ss_pred EECCCCcChh----h-hhhCHHHHHHHHHHHHHHHHHHHHHh--CCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccH
Confidence 9999975321 1 12456789999999999999999876 2247999999976432 334567899
Q ss_pred HHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHH---------HHhhhcCCCCHHHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKE---------EREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~edvA~~i~ 254 (349)
+||++.+.+++.++.+++ +++++++||.+.++....... -........ ........+.++|+|++++
T Consensus 153 ~sK~~~e~~~~~~~~~~~--~~~~ilrp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 228 (336)
T 2hun_A 153 ATKAASDMLVLGWTRTYN--LNASITRCTNNYGPYQFPEKL--IPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIE 228 (336)
T ss_dssp HHHHHHHHHHHHHHHHTT--CEEEEEEECEEESTTCCTTSH--HHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC--CCEEEEeeeeeeCcCCCcCch--HHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHH
Confidence 999999999999998864 899999999999886432100 000000000 0011234667899999999
Q ss_pred HHHhcC
Q 039397 255 SGACRG 260 (349)
Q Consensus 255 ~l~~~~ 260 (349)
++++++
T Consensus 229 ~~~~~~ 234 (336)
T 2hun_A 229 LVLLKG 234 (336)
T ss_dssp HHHHHC
T ss_pred HHHhCC
Confidence 999764
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=181.67 Aligned_cols=208 Identities=13% Similarity=0.028 Sum_probs=140.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHH--cCCeEEEEecCcchh-------hhHHHHhcCCCCeEEEEEeccc-----
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAK--RKANLVLVARRENRL-------QGSTIDEYNPINEVTLVSLNNK----- 106 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~--~G~~Vv~~~r~~~~l-------~~~~~~~~~~~~~~~~~~~d~~----- 106 (349)
|++++++|+||||||+|+||++++++|++ +|++|++++|+.... +............+..+.+|..
T Consensus 4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 83 (362)
T 3sxp_A 4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL 83 (362)
T ss_dssp SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence 45688999999999999999999999999 999999999976511 1101111112234577788822
Q ss_pred ---cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-------
Q 039397 107 ---ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------- 176 (349)
Q Consensus 107 ---~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------- 176 (349)
..+++|+||||||.... +.++++..+++|+.|+.++++++.. .+++||++||.+.+...
T Consensus 84 ~~~~~~~~D~vih~A~~~~~-------~~~~~~~~~~~Nv~gt~~ll~aa~~----~~~~~V~~SS~~vyg~~~~~~~E~ 152 (362)
T 3sxp_A 84 RRLEKLHFDYLFHQAAVSDT-------TMLNQELVMKTNYQAFLNLLEIARS----KKAKVIYASSAGVYGNTKAPNVVG 152 (362)
T ss_dssp HHHTTSCCSEEEECCCCCGG-------GCCCHHHHHHHHTHHHHHHHHHHHH----TTCEEEEEEEGGGGCSCCSSBCTT
T ss_pred HHhhccCCCEEEECCccCCc-------cccCHHHHHHHHHHHHHHHHHHHHH----cCCcEEEeCcHHHhCCCCCCCCCC
Confidence 25789999999996422 2366889999999999999999843 45679999996554322
Q ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc--chhhh---------hHHHHhhhcC
Q 039397 177 ---PRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED--GAEMQ---------WKEEREVHVA 242 (349)
Q Consensus 177 ---~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~--~~~~~---------~~~~~~~~~~ 242 (349)
.....|+.||++.+.+++.++.+ +.++.+.|+.+-.+.......... ..... ..........
T Consensus 153 ~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 228 (362)
T 3sxp_A 153 KNESPENVYGFSKLCMDEFVLSHSND----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRD 228 (362)
T ss_dssp SCCCCSSHHHHHHHHHHHHHHHTTTT----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHhcc----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEc
Confidence 12456999999999999998765 466677776665543221100000 00000 0000111234
Q ss_pred CCCHHHHHHHHHHHHhcCCce
Q 039397 243 GGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 243 ~~~~edvA~~i~~l~~~~~~~ 263 (349)
.+.++|+|++++++++++...
T Consensus 229 ~i~v~Dva~ai~~~~~~~~~g 249 (362)
T 3sxp_A 229 FVYIEDVIQANVKAMKAQKSG 249 (362)
T ss_dssp CEEHHHHHHHHHHHTTCSSCE
T ss_pred cEEHHHHHHHHHHHHhcCCCC
Confidence 667999999999999987553
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-20 Score=175.02 Aligned_cols=206 Identities=12% Similarity=-0.011 Sum_probs=140.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH--HhcCCCCeEEEEEecccc-------CCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI--DEYNPINEVTLVSLNNKE-------SKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~--~~~~~~~~~~~~~~d~~~-------~g~iDvlV 115 (349)
.++|+||||||+|+||++++++|+++|++|+++.|+.+..+.... ++......+.++.+|... ..++|++|
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 82 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF 82 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 467999999999999999999999999999999998764432221 111101246777887332 24689999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC------------------
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP------------------ 177 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~------------------ 177 (349)
|+|+... .. ..+..++.+++|+.|+.++++++.+.. +.++||++||.++..+.+
T Consensus 83 h~A~~~~---~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~ 154 (337)
T 2c29_D 83 HVATPMD---FE---SKDPENEVIKPTIEGMLGIMKSCAAAK--TVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCR 154 (337)
T ss_dssp ECCCCCC---SS---CSSHHHHTHHHHHHHHHHHHHHHHHHS--CCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHH
T ss_pred EeccccC---CC---CCChHHHHHHHHHHHHHHHHHHHHhCC--CccEEEEeeeHhhcccCCCCCcccCcccCCchhhhc
Confidence 9998541 11 113345789999999999999998753 247999999987654321
Q ss_pred ----CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchh---h---hhHHHHhhhcCCCCHH
Q 039397 178 ----RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAE---M---QWKEEREVHVAGGPVE 247 (349)
Q Consensus 178 ----~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~e 247 (349)
....|++||++.+.+++.++.+.+ +++++++||.+.++.........-... . ..........+.+.++
T Consensus 155 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~ 232 (337)
T 2c29_D 155 AKKMTAWMYFVSKTLAEQAAWKYAKENN--IDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLD 232 (337)
T ss_dssp HHCCTTHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHH
T ss_pred ccCCccchHHHHHHHHHHHHHHHHHHcC--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHH
Confidence 234699999999999888775543 899999999999886543211000000 0 0000001123478999
Q ss_pred HHHHHHHHHHhcC
Q 039397 248 DFARLIVSGACRG 260 (349)
Q Consensus 248 dvA~~i~~l~~~~ 260 (349)
|+|++++++++++
T Consensus 233 Dva~a~~~~~~~~ 245 (337)
T 2c29_D 233 DLCNAHIYLFENP 245 (337)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCc
Confidence 9999999999764
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-21 Score=167.77 Aligned_cols=173 Identities=17% Similarity=0.215 Sum_probs=137.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc--------CCCcceeeecCcC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE--------SKAVDHLVNTASL 120 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~--------~g~iDvlVnnAg~ 120 (349)
+|+||||+|+||++++++|+++|++|++++|+.++++.. ..+..+.+|... ..++|++|||||.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 699999999999999999999999999999998765543 357777877433 5679999999997
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCC-------chhhHHHHHHHHHHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPR-------MSLYASAKAALVTFY 193 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~-------~~~Y~asKaal~~l~ 193 (349)
.. ...+++|+.++.++++++... +.++||++||..+..+.+. ...|+.+|++.+.+.
T Consensus 74 ~~-------------~~~~~~n~~~~~~l~~a~~~~---~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~ 137 (219)
T 3dqp_A 74 GG-------------KSLLKVDLYGAVKLMQAAEKA---EVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYL 137 (219)
T ss_dssp TT-------------SSCCCCCCHHHHHHHHHHHHT---TCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHH
T ss_pred CC-------------CCcEeEeHHHHHHHHHHHHHh---CCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHH
Confidence 53 126778999999999988532 3379999999988877666 789999999999988
Q ss_pred HHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 194 ESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 194 ~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+ . ...+++++++||.+.++......... ......++++|+|++++++++++.
T Consensus 138 ~---~--~~~i~~~ilrp~~v~g~~~~~~~~~~-----------~~~~~~i~~~Dva~~i~~~l~~~~ 189 (219)
T 3dqp_A 138 T---K--ETNLDYTIIQPGALTEEEATGLIDIN-----------DEVSASNTIGDVADTIKELVMTDH 189 (219)
T ss_dssp H---H--SCCCEEEEEEECSEECSCCCSEEEES-----------SSCCCCEEHHHHHHHHHHHHTCGG
T ss_pred H---h--ccCCcEEEEeCceEecCCCCCccccC-----------CCcCCcccHHHHHHHHHHHHhCcc
Confidence 6 1 22299999999999887654332110 233467889999999999998754
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=4e-21 Score=178.99 Aligned_cols=165 Identities=12% Similarity=0.005 Sum_probs=125.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEecccc---------CCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLNNKE---------SKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d~~~---------~g~iDvlV 115 (349)
++|+||||||+|+||++++++|+++|++|++++|+.+...+....+. .....+..+.+|... .+++|++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 46799999999999999999999999999999998877665544431 112356777787321 14799999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCCCchhhHH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLPRMSLYAS 184 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~~~~~Y~a 184 (349)
||||........ +..++.+++|+.++.++++++... +.++||++||.+.+. +......|+.
T Consensus 84 h~A~~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~ 155 (341)
T 3enk_A 84 HFAALKAVGESV-----AKPIEYYRNNLDSLLSLLRVMRER---AVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQ 155 (341)
T ss_dssp ECCCCCCHHHHH-----HCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHH
T ss_pred ECccccccCccc-----cChHHHHHHHHHHHHHHHHHHHhC---CCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHH
Confidence 999986543222 334678999999999988876432 347999999977652 2223468999
Q ss_pred HHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCC
Q 039397 185 AKAALVTFYESLRFELNDEVGITIATHGWIGIEMT 219 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~ 219 (349)
||++.+.+++.++.++.. ++++++.||.+..+..
T Consensus 156 sK~~~e~~~~~~~~~~~~-~~~~~lRp~~v~G~~~ 189 (341)
T 3enk_A 156 TKLMAEQILRDVEAADPS-WRVATLRYFNPVGAHE 189 (341)
T ss_dssp HHHHHHHHHHHHHHHCTT-CEEEEEEECEEECCCT
T ss_pred HHHHHHHHHHHHhhcCCC-ceEEEEeeccccCCcc
Confidence 999999999999988753 7899999988876643
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.9e-21 Score=170.45 Aligned_cols=196 Identities=14% Similarity=-0.004 Sum_probs=137.6
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKR--KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlV 115 (349)
+++|+++||||+|+||++++++|+++ |++|++++|+++++++. ...+..+.+|. +...++|++|
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~d~vi 74 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQGIDALV 74 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHcCCCEEE
Confidence 45789999999999999999999999 89999999987665432 12345566772 2235799999
Q ss_pred ecCcCCCCccc------ccc--CCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchh-----h
Q 039397 116 NTASLGHTFFF------EEV--TDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSL-----Y 182 (349)
Q Consensus 116 nnAg~~~~~~~------~~~--~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~-----Y 182 (349)
||||....... .+. ...+++++.+++|+.++.++++++.+. +.++||++||..+..+.+.... |
T Consensus 75 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~y 151 (253)
T 1xq6_A 75 ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---GVKHIVVVGSMGGTNPDHPLNKLGNGNI 151 (253)
T ss_dssp ECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---TCSEEEEEEETTTTCTTCGGGGGGGCCH
T ss_pred EeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc---CCCEEEEEcCccCCCCCCccccccchhH
Confidence 99997643221 000 122455678999999999999988643 3479999999988655444433 5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 183 ASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+.+|++++.+++. ..+++++++||.+.++........... .... .......++++|+|++++++++++
T Consensus 152 ~~sK~~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~Dva~~~~~~~~~~ 219 (253)
T 1xq6_A 152 LVWKRKAEQYLAD------SGTPYTIIRAGGLLDKEGGVRELLVGK-DDEL---LQTDTKTVPRADVAEVCIQALLFE 219 (253)
T ss_dssp HHHHHHHHHHHHT------SSSCEEEEEECEEECSCSSSSCEEEES-TTGG---GGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHh------CCCceEEEecceeecCCcchhhhhccC-CcCC---cCCCCcEEcHHHHHHHHHHHHcCc
Confidence 6699999988753 238999999999998864321100000 0000 011235678999999999999864
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-21 Score=177.24 Aligned_cols=195 Identities=14% Similarity=0.051 Sum_probs=142.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc---------CCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE---------SKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~---------~g~iDvlV 115 (349)
.+.|+||||||+|+||++++++|+++|++|++++|+.+. +. + .+..+.+|... .+++|++|
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 79 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISDIKPDYIF 79 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 345799999999999999999999999999999998765 22 1 46667777221 13589999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-------------CCchhh
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-------------PRMSLY 182 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-------------~~~~~Y 182 (349)
||||..... . ..+++++.+++|+.|+.++++++ +.+ ++.++||++||.+.+.+. +....|
T Consensus 80 h~A~~~~~~----~-~~~~~~~~~~~Nv~g~~~l~~a~-~~~-~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y 152 (321)
T 2pk3_A 80 HLAAKSSVK----D-SWLNKKGTFSTNVFGTLHVLDAV-RDS-NLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPY 152 (321)
T ss_dssp ECCSCCCHH----H-HTTCHHHHHHHHHHHHHHHHHHH-HHH-TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHH
T ss_pred EcCcccchh----h-hhhcHHHHHHHHHHHHHHHHHHH-HHh-CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCcc
Confidence 999975431 1 22567899999999999999999 554 235799999998765432 456789
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhh-HH---H----------HhhhcCCCCHHH
Q 039397 183 ASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQW-KE---E----------REVHVAGGPVED 248 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~---~----------~~~~~~~~~~ed 248 (349)
++||++.+.+++.++.+.+ ++++++.||.+.++........ .. .... .. . .......+.++|
T Consensus 153 ~~sK~~~E~~~~~~~~~~g--i~~~ilrp~~v~g~~~~~~~~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~D 228 (321)
T 2pk3_A 153 GVSKASVGMLARQYVKAYG--MDIIHTRTFNHIGPGQSLGFVT-QD-FAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRD 228 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHC--CEEEEEEECEEECTTCCTTSHH-HH-HHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHH
T ss_pred HHHHHHHHHHHHHHHHHcC--CCEEEEEeCcccCcCCCCCchH-HH-HHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHH
Confidence 9999999999999998764 8999999999988865431000 00 0000 00 0 011234578999
Q ss_pred HHHHHHHHHhcC
Q 039397 249 FARLIVSGACRG 260 (349)
Q Consensus 249 vA~~i~~l~~~~ 260 (349)
+|++++++++++
T Consensus 229 va~a~~~~~~~~ 240 (321)
T 2pk3_A 229 IVQAYWLLSQYG 240 (321)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhCC
Confidence 999999999865
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=176.27 Aligned_cols=202 Identities=12% Similarity=0.016 Sum_probs=142.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEecccc-------C--CCcceeeec
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLNNKE-------S--KAVDHLVNT 117 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d~~~-------~--g~iDvlVnn 117 (349)
|+||||||+|+||++++++|+++|++|++++|+. .........+... .++..+.+|... . .++|++|||
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-CceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 5799999999999999999999999999999864 2222222333222 346677787321 1 249999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------------------
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL----------------------- 174 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~----------------------- 174 (349)
||..... . ..++++..+++|+.|+.++++++.+.+. +++||++||.+.+.
T Consensus 81 A~~~~~~----~-~~~~~~~~~~~nv~~~~~l~~a~~~~~~--~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~ 153 (347)
T 1orr_A 81 AGQVAMT----T-SIDNPCMDFEINVGGTLNLLEAVRQYNS--NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGY 153 (347)
T ss_dssp CCCCCHH----H-HHHCHHHHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCB
T ss_pred CcccChh----h-hhhCHHHHHHHHHHHHHHHHHHHHHhCC--CceEEEeccHHHhCCCCcCCcccccccccccccccCc
Confidence 9975321 1 1246788999999999999999988763 26999999987543
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc-chhh-hhHHHHh----hh----
Q 039397 175 ----PLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED-GAEM-QWKEERE----VH---- 240 (349)
Q Consensus 175 ----~~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~-~~~~-~~~~~~~----~~---- 240 (349)
+.+....|++||++.+.+++.++.+++ ++++++.||.+.++.......... .... ....... +.
T Consensus 154 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 231 (347)
T 1orr_A 154 DESTQLDFHSPYGCSKGAADQYMLDYARIFG--LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISG 231 (347)
T ss_dssp CTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEES
T ss_pred cccCCCCCCCchHHHHHHHHHHHHHHHHHhC--CcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEec
Confidence 223567899999999999999998874 899999999999986543110000 0000 0001110 11
Q ss_pred -----cCCCCHHHHHHHHHHHHhc
Q 039397 241 -----VAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 241 -----~~~~~~edvA~~i~~l~~~ 259 (349)
...+.++|+|+++++++++
T Consensus 232 ~g~~~~~~i~v~Dva~a~~~~~~~ 255 (347)
T 1orr_A 232 NGKQVRDVLHAEDMISLYFTALAN 255 (347)
T ss_dssp SSCCEEECEEHHHHHHHHHHHHHT
T ss_pred CCcceEeeEEHHHHHHHHHHHHhc
Confidence 1256899999999999974
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-20 Score=172.62 Aligned_cols=204 Identities=12% Similarity=-0.030 Sum_probs=131.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec-CcchhhhHH--HHhcCCCCeEEEEEeccc-------cCCCcceeee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVAR-RENRLQGST--IDEYNPINEVTLVSLNNK-------ESKAVDHLVN 116 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r-~~~~l~~~~--~~~~~~~~~~~~~~~d~~-------~~g~iDvlVn 116 (349)
||+||||||+|+||++++++|+++|++|+++.| +.+..+... .++......+.++.+|.. ...++|++||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 689999999999999999999999999999998 653221111 111100124566667732 2346899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCC------------------
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPR------------------ 178 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~------------------ 178 (349)
||+.. ... ..+.+++++++|+.|+.++++++.+.+ +.++||++||.++..+.+.
T Consensus 81 ~A~~~---~~~---~~~~~~~~~~~nv~gt~~l~~aa~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~ 152 (322)
T 2p4h_X 81 TASPI---DFA---VSEPEEIVTKRTVDGALGILKACVNSK--TVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRS 152 (322)
T ss_dssp CCCCC--------------CHHHHHHHHHHHHHHHHHTTCS--SCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHH
T ss_pred cCCcc---cCC---CCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccHHHcccCCCCCeecCCccccchhhhcc
Confidence 99642 111 112235689999999999999998762 3479999999886543211
Q ss_pred ----chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHH-h----hhcCCCCHHHH
Q 039397 179 ----MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEER-E----VHVAGGPVEDF 249 (349)
Q Consensus 179 ----~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~edv 249 (349)
...|++||++.+.+++.++.+. .+++++++||.+.+++................... . .....+.++|+
T Consensus 153 ~~p~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dv 230 (322)
T 2p4h_X 153 VKPFGWNYAVSKTLAEKAVLEFGEQN--GIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDV 230 (322)
T ss_dssp HCCTTHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHH
T ss_pred cCcccccHHHHHHHHHHHHHHHHHhc--CCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHH
Confidence 1169999998888777665443 28999999999999875432110000000000000 0 00136789999
Q ss_pred HHHHHHHHhcC
Q 039397 250 ARLIVSGACRG 260 (349)
Q Consensus 250 A~~i~~l~~~~ 260 (349)
|+++++++++.
T Consensus 231 a~a~~~~~~~~ 241 (322)
T 2p4h_X 231 ARAHIYLLENS 241 (322)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHhhCc
Confidence 99999999764
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=177.60 Aligned_cols=211 Identities=11% Similarity=-0.018 Sum_probs=155.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHH-HcCCeEEEEecCcchhh------------hHHHHhcCCCCeEEEEEec-----
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYA-KRKANLVLVARRENRLQ------------GSTIDEYNPINEVTLVSLN----- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la-~~G~~Vv~~~r~~~~l~------------~~~~~~~~~~~~~~~~~~d----- 104 (349)
....+|+|||||||+|||++++..|+ +.|++|+++.+..+..+ ...+.+...+.....+.||
T Consensus 46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE 125 (401)
T ss_dssp TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence 35678999999999999999999999 68999999998765433 2333444556788899999
Q ss_pred ---------cccCCCcceeeecCcCCCCccc---------------------ccc-------------C--CcchHHHHH
Q 039397 105 ---------NKESKAVDHLVNTASLGHTFFF---------------------EEV-------------T--DTSIFPRLL 139 (349)
Q Consensus 105 ---------~~~~g~iDvlVnnAg~~~~~~~---------------------~~~-------------~--~~~~~~~~~ 139 (349)
.+++|+||+||||+|....... .+. + +.+.+.++|
T Consensus 126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM 205 (401)
T 4ggo_A 126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM 205 (401)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence 5678999999999997632110 000 0 013445667
Q ss_pred HhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC--CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCC
Q 039397 140 DINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP--RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE 217 (349)
Q Consensus 140 ~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~--~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~ 217 (349)
.+..++.+...+...+.|. .++++|.+|++.+....| +...++++|++|++.++.|+.||++ ++++++++|.+.|.
T Consensus 206 g~s~~s~w~~al~~a~lla-~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~-~~a~v~v~~a~vT~ 283 (401)
T 4ggo_A 206 GGEDWERWIKQLSKEGLLE-EGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS-IRAFVSVNKGLVTR 283 (401)
T ss_dssp SSHHHHHHHHHHHHTTCEE-EEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCCCCCT
T ss_pred hhhHHHHHHHHHHhhhccc-CCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEcCccccc
Confidence 7788888888999988884 568999999999876555 4468999999999999999999987 89999999999999
Q ss_pred CCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 218 MTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
........ ..........++...+-|.+.+.+.++..+
T Consensus 284 AssaIP~~----ply~~~l~kvmk~~g~heg~ieq~~rl~~~ 321 (401)
T 4ggo_A 284 ASAVIPVI----PLYLASLFKVMKEKGNHEGCIEQITRLYAE 321 (401)
T ss_dssp TGGGSSSH----HHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred hhhcCCCc----hHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 77654211 111111122233444557788888887753
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.7e-21 Score=171.74 Aligned_cols=174 Identities=16% Similarity=0.125 Sum_probs=135.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnAg~ 120 (349)
|+++||||+|+||++++++|+++|++|++++|+.++... ..+..+.+|. +...++|++|||||.
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE---------AHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC---------TTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC---------CCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 689999999999999999999999999999998754211 2356666772 223469999999997
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC------------CchhhHHHHHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP------------RMSLYASAKAA 188 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~------------~~~~Y~asKaa 188 (349)
. ..+.+++.+++|+.++.++++++.+. +.++||++||...+...+ ....|+.+|++
T Consensus 74 ~---------~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~ 141 (267)
T 3ay3_A 74 S---------VERPWNDILQANIIGAYNLYEAARNL---GKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCF 141 (267)
T ss_dssp C---------SCCCHHHHHHHTHHHHHHHHHHHHHT---TCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHH
T ss_pred C---------CCCCHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHH
Confidence 5 12557899999999999999998753 347999999988764433 34789999999
Q ss_pred HHHHHHHHHHHhcCCeeEEEEecCcc-cCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 189 LVTFYESLRFELNDEVGITIATHGWI-GIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 189 l~~l~~~la~el~~~I~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++.+++.++.+.+ ++++++.||.+ .++.. . ......++++|+|++++.++.++.
T Consensus 142 ~e~~~~~~~~~~g--i~~~~lrp~~v~~~~~~--------~---------~~~~~~~~~~dva~~~~~~~~~~~ 196 (267)
T 3ay3_A 142 GEDLASLYYHKFD--IETLNIRIGSCFPKPKD--------A---------RMMATWLSVDDFMRLMKRAFVAPK 196 (267)
T ss_dssp HHHHHHHHHHTTC--CCEEEEEECBCSSSCCS--------H---------HHHHHBCCHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHcC--CCEEEEeceeecCCCCC--------C---------CeeeccccHHHHHHHHHHHHhCCC
Confidence 9999998875432 89999999997 44310 0 112356899999999999998764
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=171.65 Aligned_cols=195 Identities=13% Similarity=0.009 Sum_probs=139.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc------CCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE------SKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~------~g~iDvlVnnAg~~ 121 (349)
++||||||+|+||++++++|+++|++|++++|+.+...+.. ...+..+.+|... ... |++|||||..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~ 73 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------NPSAELHVRDLKDYSWGAGIKG-DVVFHFAANP 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------CTTSEEECCCTTSTTTTTTCCC-SEEEECCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------CCCceEEECccccHHHHhhcCC-CEEEECCCCC
Confidence 47999999999999999999999999999999876544322 2345566666332 223 9999999964
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------CCCchhhHHHHHHHH
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------LPRMSLYASAKAALV 190 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~ 190 (349)
... . ..++++..+++|+.|+.++++++... +.++||++||.+.+.. ......|+.||++.+
T Consensus 74 ~~~----~-~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e 145 (312)
T 3ko8_A 74 EVR----L-STTEPIVHFNENVVATFNVLEWARQT---GVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGE 145 (312)
T ss_dssp SSS----G-GGSCHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred Cch----h-hhhCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHH
Confidence 321 1 23567899999999999999998542 3469999999876532 334678999999999
Q ss_pred HHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccch-------hhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 191 TFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGA-------EMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 191 ~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.+++.++.+++ ++++++.||.+.++.........--. ..............+.++|+|++++.++++
T Consensus 146 ~~~~~~~~~~g--~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 219 (312)
T 3ko8_A 146 VMCATYARLFG--VRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKK 219 (312)
T ss_dssp HHHHHHHHHHC--CEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC--CCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHh
Confidence 99999998874 89999999999988644311000000 000000011123456689999999999987
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.1e-21 Score=169.08 Aligned_cols=171 Identities=14% Similarity=0.158 Sum_probs=115.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLV 115 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlV 115 (349)
.+..|+|+||||+||||++++++|+++| ++|++++|+++++++.. ...+..+.+|. +...++|+||
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~D~vv 93 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY------PTNSQIIMGDVLNHAALKQAMQGQDIVY 93 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC------CTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc------cCCcEEEEecCCCHHHHHHHhcCCCEEE
Confidence 4456899999999999999999999999 89999999987765422 23577788883 2345789999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCc-------------hh
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRM-------------SL 181 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~-------------~~ 181 (349)
||||.. + +. ..++.+++.|++.+ ++||++||..++.+.+.. ..
T Consensus 94 ~~a~~~---------~---~~-----------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (236)
T 3qvo_A 94 ANLTGE---------D---LD-----------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKP 150 (236)
T ss_dssp EECCST---------T---HH-----------HHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHH
T ss_pred EcCCCC---------c---hh-----------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHH
Confidence 999851 1 11 23556777776555 899999999887655442 23
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|..+|.+ +... +++++|+||++.++.......... ......+.++++|+|++++++++++
T Consensus 151 ~~~~~~~-----------l~~~gi~~~~vrPg~i~~~~~~~~~~~~~--------~~~~~~~~i~~~DvA~~i~~ll~~~ 211 (236)
T 3qvo_A 151 FRRAADA-----------IEASGLEYTILRPAWLTDEDIIDYELTSR--------NEPFKGTIVSRKSVAALITDIIDKP 211 (236)
T ss_dssp HHHHHHH-----------HHTSCSEEEEEEECEEECCSCCCCEEECT--------TSCCSCSEEEHHHHHHHHHHHHHST
T ss_pred HHHHHHH-----------HHHCCCCEEEEeCCcccCCCCcceEEecc--------CCCCCCcEECHHHHHHHHHHHHcCc
Confidence 3333322 2344 999999999999876543211110 0111235678999999999999987
Q ss_pred Cc
Q 039397 261 DT 262 (349)
Q Consensus 261 ~~ 262 (349)
..
T Consensus 212 ~~ 213 (236)
T 3qvo_A 212 EK 213 (236)
T ss_dssp TT
T ss_pred cc
Confidence 63
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=177.33 Aligned_cols=201 Identities=16% Similarity=0.060 Sum_probs=143.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCc--chhhhHHHHhcCCCCeEEEEEecccc-------C--CCcceeee
Q 039397 49 VVIITGASSDIGEQIAYEYAKR-KANLVLVARRE--NRLQGSTIDEYNPINEVTLVSLNNKE-------S--KAVDHLVN 116 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~--~~l~~~~~~~~~~~~~~~~~~~d~~~-------~--g~iDvlVn 116 (349)
+||||||+|+||++++++|+++ |++|++++|+. ...+.+ .++.. ...+..+.+|... . +++|+|||
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE-SNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT-CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc-CCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 5999999999999999999998 79999999975 222222 12211 3457778888321 1 27999999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC------CCeEEEEecccccc----------------
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES------NGRVVVNASVENWL---------------- 174 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~------~g~IV~isS~~~~~---------------- 174 (349)
|||..... . +.+++++++++|+.|+.++++++.+.|..- +|+||++||.+.+.
T Consensus 80 ~A~~~~~~----~-~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~ 154 (361)
T 1kew_A 80 LAAESHVD----R-SITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL 154 (361)
T ss_dssp CCSCCCHH----H-HHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC
T ss_pred CCCCcChh----h-hhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCC
Confidence 99975321 1 124568899999999999999999986431 26999999976432
Q ss_pred -----CCCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhh-hHHH--------Hhhh
Q 039397 175 -----PLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQ-WKEE--------REVH 240 (349)
Q Consensus 175 -----~~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~--------~~~~ 240 (349)
+.+....|++||++.+.+++.++.+++ +++++++||.+.++....... -..... .... ....
T Consensus 155 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g--i~~~~vrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 230 (361)
T 1kew_A 155 FTETTAYAPSSPYSASKASSDHLVRAWRRTYG--LPTIVTNCSNNYGPYHFPEKL--IPLVILNALEGKPLPIYGKGDQI 230 (361)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECEEESTTCCTTSH--HHHHHHHHHHTCCEEEETTSCCE
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHHHhC--CcEEEEeeceeECCCCCcccH--HHHHHHHHHcCCCceEcCCCcee
Confidence 223567899999999999999998874 899999999999987532100 000000 0000 0012
Q ss_pred cCCCCHHHHHHHHHHHHhcC
Q 039397 241 VAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 241 ~~~~~~edvA~~i~~l~~~~ 260 (349)
...+.++|+|++++++++++
T Consensus 231 ~~~i~v~Dva~a~~~~~~~~ 250 (361)
T 1kew_A 231 RDWLYVEDHARALHMVVTEG 250 (361)
T ss_dssp EEEEEHHHHHHHHHHHHHHC
T ss_pred EeeEEHHHHHHHHHHHHhCC
Confidence 34567899999999999864
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.3e-21 Score=166.75 Aligned_cols=188 Identities=14% Similarity=0.084 Sum_probs=136.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnAg~ 120 (349)
++++||||+|+||++++++|+++|++|++++|+.++.+.. ...+..+.+|. +...++|++|||||.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 6899999999999999999999999999999998765432 14577788883 234579999999986
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC----------CchhhHHHHHHHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP----------RMSLYASAKAALV 190 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~----------~~~~Y~asKaal~ 190 (349)
.. + + ...+++|+.++.++++++... +.+++|++||..+..+.+ ....|+.+|++.+
T Consensus 78 ~~-----~--~----~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e 143 (227)
T 3dhn_A 78 GW-----N--N----PDIYDETIKVYLTIIDGVKKA---GVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGE 143 (227)
T ss_dssp -----------------CCSHHHHHHHHHHHHHHHT---TCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHH
T ss_pred CC-----C--C----hhHHHHHHHHHHHHHHHHHHh---CCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHH
Confidence 41 1 1 236788999999999988653 236999999988765543 2678999999999
Q ss_pred HHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 191 TFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 191 ~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
.+.+.++.+. .++++++.||.+.++........... ..... .......++++|+|++++.+++++.
T Consensus 144 ~~~~~~~~~~--~~~~~ilrp~~v~g~~~~~~~~~~~~-~~~~~--~~~~~~~i~~~Dva~ai~~~l~~~~ 209 (227)
T 3dhn_A 144 FYLNFLMKEK--EIDWVFFSPAADMRPGVRTGRYRLGK-DDMIV--DIVGNSHISVEDYAAAMIDELEHPK 209 (227)
T ss_dssp HHHHTGGGCC--SSEEEEEECCSEEESCCCCCCCEEES-SBCCC--CTTSCCEEEHHHHHHHHHHHHHSCC
T ss_pred HHHHHHhhcc--CccEEEEeCCcccCCCccccceeecC-CCccc--CCCCCcEEeHHHHHHHHHHHHhCcc
Confidence 9998887533 28999999999877654321111100 00000 0011356789999999999999875
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=176.39 Aligned_cols=206 Identities=11% Similarity=-0.056 Sum_probs=147.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-------CC--Ccceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-------SK--AVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-------~g--~iDvlV 115 (349)
|++|+||||||+|+||++++++|+++|++|++++|+.++.......+. ....+..+.+|... .. ++|++|
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 85 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREFQPEIVF 85 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhcCCCEEE
Confidence 567899999999999999999999999999999999877665544432 13356777888322 11 489999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc------------CCCCchhhH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL------------PLPRMSLYA 183 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~------------~~~~~~~Y~ 183 (349)
||||.... +. ..++++..+++|+.|+.++++++.+. ...++||++||.+.+. +......|+
T Consensus 86 h~A~~~~~----~~-~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~ 158 (357)
T 1rkx_A 86 HMAAQPLV----RL-SYSEPVETYSTNVMGTVYLLEAIRHV--GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYS 158 (357)
T ss_dssp ECCSCCCH----HH-HHHCHHHHHHHHTHHHHHHHHHHHHH--CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHH
T ss_pred ECCCCccc----cc-chhCHHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccH
Confidence 99996321 11 23567899999999999999999763 2247999999987432 233567899
Q ss_pred HHHHHHHHHHHHHHHHhc------C-CeeEEEEecCcccCCCCCCccccccchhhhhHHH--------HhhhcCCCCHHH
Q 039397 184 SAKAALVTFYESLRFELN------D-EVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE--------REVHVAGGPVED 248 (349)
Q Consensus 184 asKaal~~l~~~la~el~------~-~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ed 248 (349)
.||++.+.+++.++.++. . .++++++.||.+.++....... .-......... .......+.++|
T Consensus 159 ~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~D 237 (357)
T 1rkx_A 159 NSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDR-IVPDILRAFEQSQPVIIRNPHAIRPWQHVLE 237 (357)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSC-HHHHHHHHHHTTCCEECSCTTCEECCEETHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcccc-HHHHHHHHHhcCCCEEECCCCCeeccEeHHH
Confidence 999999999999999884 2 3899999999998875321000 00000000000 011234677899
Q ss_pred HHHHHHHHHhc
Q 039397 249 FARLIVSGACR 259 (349)
Q Consensus 249 vA~~i~~l~~~ 259 (349)
+|++++.++..
T Consensus 238 va~a~~~~~~~ 248 (357)
T 1rkx_A 238 PLSGYLLLAQK 248 (357)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998863
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=176.46 Aligned_cols=205 Identities=14% Similarity=-0.011 Sum_probs=145.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch----hhhHHHHhcC-CCCeEEEEEeccc-------cCCCcc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR----LQGSTIDEYN-PINEVTLVSLNNK-------ESKAVD 112 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~----l~~~~~~~~~-~~~~~~~~~~d~~-------~~g~iD 112 (349)
+++++||||||+|+||++++++|+++|++|++++|+... ++.+...+.. ....+.++.+|.. ...++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 567899999999999999999999999999999997642 3322222210 0135677788832 234799
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC-----------Cchh
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP-----------RMSL 181 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~-----------~~~~ 181 (349)
++|||||...... ..++++..+++|+.++.++++++.+. +.++||++||.+.+.+.+ ....
T Consensus 105 ~vih~A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~ 176 (352)
T 1sb8_A 105 YVLHQAALGSVPR-----SINDPITSNATNIDGFLNMLIAARDA---KVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSP 176 (352)
T ss_dssp EEEECCSCCCHHH-----HHHCHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSH
T ss_pred EEEECCcccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEeccHHhcCCCCCCCCCCCCCCCCCCh
Confidence 9999999753221 12567889999999999999999753 347999999988765432 3578
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc--chhhh-hHHHH--------hhhcCCCCHHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED--GAEMQ-WKEER--------EVHVAGGPVEDFA 250 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~--~~~~~-~~~~~--------~~~~~~~~~edvA 250 (349)
|+.+|++.+.+++.++.+++ ++++++.||.+.++.......... ..... ..... ......+.++|+|
T Consensus 177 Y~~sK~~~e~~~~~~~~~~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva 254 (352)
T 1sb8_A 177 YAVTKYVNELYADVFSRCYG--FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 254 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcC--CCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHH
Confidence 99999999999999998874 799999999998876532100000 00000 00000 0112467889999
Q ss_pred HHHHHHHhc
Q 039397 251 RLIVSGACR 259 (349)
Q Consensus 251 ~~i~~l~~~ 259 (349)
++++.++.+
T Consensus 255 ~a~~~~~~~ 263 (352)
T 1sb8_A 255 QANLLAATA 263 (352)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 999999876
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=174.33 Aligned_cols=202 Identities=13% Similarity=0.030 Sum_probs=142.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch---hhhHHHHhc---------CCCCeEEEEEeccc-----
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR---LQGSTIDEY---------NPINEVTLVSLNNK----- 106 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~---l~~~~~~~~---------~~~~~~~~~~~d~~----- 106 (349)
...+|+||||||+|+||++++++|+++|++|++++|+.+. .+.+...+. .....+.++.+|..
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 4567899999999999999999999999999999999873 222222211 11246778888843
Q ss_pred -cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc-------------
Q 039397 107 -ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN------------- 172 (349)
Q Consensus 107 -~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~------------- 172 (349)
..+++|+||||||.... .++++..+++|+.|+.++++++.+ +.+++|++||..+
T Consensus 146 ~~~~~~d~Vih~A~~~~~--------~~~~~~~~~~Nv~g~~~l~~aa~~----~~~~~v~~SS~~~G~~~~~~~~~~~~ 213 (427)
T 4f6c_A 146 VLPENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ----HHARLIYVSTISVGTYFDIDTEDVTF 213 (427)
T ss_dssp CCSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH----TTCEEEEEEEGGGGSEECSSCSCCEE
T ss_pred CCcCCCCEEEECCcccCC--------CCCHHHHHHHHHHHHHHHHHHHHh----cCCcEEEECchHhCCCccCCCCCccc
Confidence 35789999999997631 245678999999999999999976 4579999999887
Q ss_pred -----ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccch--hhhhHHH---------
Q 039397 173 -----WLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGA--EMQWKEE--------- 236 (349)
Q Consensus 173 -----~~~~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~--------- 236 (349)
..+......|+.+|++.+.+++.++. ..++++++.||.+-++.....+...... .......
T Consensus 214 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (427)
T 4f6c_A 214 SEADVYKGQLLTSPYTRSKFYSELKVLEAVN---NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV 290 (427)
T ss_dssp CTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH---TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH
T ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHH---cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC
Confidence 00122568899999999999998763 2389999999999887654432111000 0000000
Q ss_pred --HhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 237 --REVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 237 --~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.......++++|+|++++.++..+
T Consensus 291 ~~~~~~~~~v~v~DvA~ai~~~~~~~ 316 (427)
T 4f6c_A 291 SMAEMPVDFSFVDTTARQIVALAQVN 316 (427)
T ss_dssp HHHTCEECCEEHHHHHHHHHHHTTSC
T ss_pred ccccceEEEeeHHHHHHHHHHHHcCC
Confidence 122335778899999999999875
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.3e-19 Score=168.89 Aligned_cols=202 Identities=14% Similarity=-0.006 Sum_probs=143.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVN 116 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVn 116 (349)
+.++|+||||||+|+||++++++|+++|++|++++|+.++..... ...+.++.+|. +...++|++||
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih 99 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED------MFCDEFHLVDLRVMENCLKVTEGVDHVFN 99 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG------GTCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc------cCCceEEECCCCCHHHHHHHhCCCCEEEE
Confidence 345689999999999999999999999999999999876543221 12456677773 22357999999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc------------------CCCC
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL------------------PLPR 178 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~------------------~~~~ 178 (349)
|||........ .+++++.+++|+.++.++++++... +.++||++||.+.+. +...
T Consensus 100 ~A~~~~~~~~~----~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~ 172 (379)
T 2c5a_A 100 LAADMGGMGFI----QSNHSVIMYNNTMISFNMIEAARIN---GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEP 172 (379)
T ss_dssp CCCCCCCHHHH----TTCHHHHHHHHHHHHHHHHHHHHHT---TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCC
T ss_pred CceecCccccc----ccCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCC
Confidence 99975432111 2457899999999999999998643 236999999977643 2234
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc--ccchhhhhH-HH---------HhhhcCCCCH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML--EDGAEMQWK-EE---------REVHVAGGPV 246 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~-~~---------~~~~~~~~~~ 246 (349)
...|+.+|++.+.+++.++.+.+ ++++++.||.+.++........ ......... .. .......+.+
T Consensus 173 ~~~Y~~sK~~~E~~~~~~~~~~g--i~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v 250 (379)
T 2c5a_A 173 QDAFGLEKLATEELCKHYNKDFG--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFI 250 (379)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEH
T ss_pred CChhHHHHHHHHHHHHHHHHHHC--CCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEH
Confidence 56899999999999999988764 8999999999988754321000 000000000 00 0012346678
Q ss_pred HHHHHHHHHHHhcC
Q 039397 247 EDFARLIVSGACRG 260 (349)
Q Consensus 247 edvA~~i~~l~~~~ 260 (349)
+|+|++++.+++++
T Consensus 251 ~Dva~ai~~~l~~~ 264 (379)
T 2c5a_A 251 DECVEGVLRLTKSD 264 (379)
T ss_dssp HHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHhhcc
Confidence 99999999999865
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-20 Score=213.47 Aligned_cols=163 Identities=20% Similarity=0.116 Sum_probs=121.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCcchhh---hHHHHhcCCCCeEEEEEec-------------cccC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKAN-LVLVARRENRLQ---GSTIDEYNPINEVTLVSLN-------------NKES 108 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~~~l~---~~~~~~~~~~~~~~~~~~d-------------~~~~ 108 (349)
.+|+++||||++|||+++|+.|+++|++ |++++|+..+.+ +..+++...+.++..+.+| ..++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 5799999999999999999999999997 888999876543 3333443345578888888 2246
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
|++|+||||||+.....+.+. +.++|++++++|+.|++++.+++.+.|.+ .|+||++||+++..+.++++.|+++|++
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~-t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-~g~iV~iSS~ag~~g~~g~~~Y~aaKaa 2040 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQ-TPEFFQDVSKPKYSGTANLDRVTREACPE-LDYFVIFSSVSCGRGNAGQANYGFANSA 2040 (2512)
T ss_dssp SCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT-CCEEEEECCHHHHTTCTTCHHHHHHHHH
T ss_pred CCCcEEEECCCcCCCCchhhC-CHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCEEEEecchhhcCCCCCcHHHHHHHHH
Confidence 899999999999887788886 46999999999999999999999998854 3899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeeEEEEecCc
Q 039397 189 LVTFYESLRFELNDEVGITIATHGW 213 (349)
Q Consensus 189 l~~l~~~la~el~~~I~v~~v~PG~ 213 (349)
+++|++.++.+- +...++..|.
T Consensus 2041 l~~l~~~rr~~G---l~~~a~~~g~ 2062 (2512)
T 2vz8_A 2041 MERICEKRRHDG---LPGLAVQWGA 2062 (2512)
T ss_dssp HHHHHHHHHHTT---SCCCEEEECC
T ss_pred HHHHHHHHHHCC---CcEEEEEccC
Confidence 999999877652 3444444444
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.9e-20 Score=172.01 Aligned_cols=207 Identities=12% Similarity=0.013 Sum_probs=138.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-----hhhHHHHhcC-CCCeEEEEEeccccC-------C--Ccc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-----LQGSTIDEYN-PINEVTLVSLNNKES-------K--AVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-----l~~~~~~~~~-~~~~~~~~~~d~~~~-------g--~iD 112 (349)
|+||||||+|+||++++++|+++|++|++++|+.+. ++.+..+... ....+..+.+|.... . ++|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 789999999999999999999999999999998654 2222111100 123567778883221 1 579
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------CCCchh
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------LPRMSL 181 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~~~~~~ 181 (349)
++|||||...... ..++++..+++|+.|+.++++++.+...+++++||++||.+.+.. ......
T Consensus 105 ~vih~A~~~~~~~-----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~ 179 (375)
T 1t2a_A 105 EIYNLGAQSHVKI-----SFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSP 179 (375)
T ss_dssp EEEECCSCCCHHH-----HHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSH
T ss_pred EEEECCCcccccc-----cccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCCh
Confidence 9999999753221 125578899999999999999998876533479999999877642 224578
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc-chhhh-hHHH---------HhhhcCCCCHHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED-GAEMQ-WKEE---------REVHVAGGPVEDFA 250 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~-~~~~~-~~~~---------~~~~~~~~~~edvA 250 (349)
|+.+|++.+.+++.++.+++ +.+..+.|+.+..+.....+.... ..... .... .......+.++|+|
T Consensus 180 Y~~sK~~~e~~~~~~~~~~~--~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva 257 (375)
T 1t2a_A 180 YGAAKLYAYWIVVNFREAYN--LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV 257 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhC--CCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHH
Confidence 99999999999999998875 566667765554432211100000 00000 0000 01123466789999
Q ss_pred HHHHHHHhcCC
Q 039397 251 RLIVSGACRGD 261 (349)
Q Consensus 251 ~~i~~l~~~~~ 261 (349)
++++.++.++.
T Consensus 258 ~a~~~~~~~~~ 268 (375)
T 1t2a_A 258 EAMWLMLQNDE 268 (375)
T ss_dssp HHHHHHHHSSS
T ss_pred HHHHHHHhcCC
Confidence 99999998653
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.4e-20 Score=169.67 Aligned_cols=191 Identities=14% Similarity=0.046 Sum_probs=135.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnAg~ 120 (349)
.+|+||||+|+||++++++|+++|++|++++|+.++.+.+.. ..+..+.+|. +...++|++|||||.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY------LEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG------GCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc------CCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 379999999999999999999999999999998876543321 2456677772 234579999999996
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCC----------------chhhHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPR----------------MSLYAS 184 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~----------------~~~Y~a 184 (349)
... ..+++++.+++|+.++.++++++.+. +.+++|++||.+.+.+.+. ...|+.
T Consensus 88 ~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~ 157 (342)
T 2x4g_A 88 YPS-------RPRRWQEEVASALGQTNPFYAACLQA---RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVL 157 (342)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHH---TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHH
T ss_pred CcC-------CCCCHHHHHHHHHHHHHHHHHHHHHc---CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHH
Confidence 531 12456788999999999999999864 3479999999988755443 678999
Q ss_pred HHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCC-CCccccccchhhhhHHHH------hhhcCCCCHHHHHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDEVGITIATHGWIGIEMT-KGKFMLEDGAEMQWKEER------EVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~edvA~~i~~l~ 257 (349)
+|++.+.+++.++.+ .++++++.||.+.++.. .... .. ........ ......+.++|+|++++.++
T Consensus 158 sK~~~e~~~~~~~~~---g~~~~ilrp~~v~g~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~ 230 (342)
T 2x4g_A 158 CKWALDEQAREQARN---GLPVVIGIPGMVLGELDIGPTT---GR-VITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMAL 230 (342)
T ss_dssp HHHHHHHHHHHHHHT---TCCEEEEEECEEECSCCSSCST---TH-HHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc---CCcEEEEeCCceECCCCccccH---HH-HHHHHHcCCCccccCCCcceeeHHHHHHHHHHHH
Confidence 999999999999864 38999999999988765 2100 00 00000000 01123568999999999999
Q ss_pred hcCC
Q 039397 258 CRGD 261 (349)
Q Consensus 258 ~~~~ 261 (349)
+++.
T Consensus 231 ~~~~ 234 (342)
T 2x4g_A 231 ERGR 234 (342)
T ss_dssp HHSC
T ss_pred hCCC
Confidence 8753
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-19 Score=165.86 Aligned_cols=206 Identities=13% Similarity=0.008 Sum_probs=141.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--ccCCCcceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--KESKAVDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--~~~g~iDvlVnnAg~ 120 (349)
..+++++||||||+|+||++++++|+++|++|++++|+..........+. ....+.++.+|. ....++|++|||||.
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~d~vih~A~~ 101 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPLYIEVDQIYHLASP 101 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCCCCCCSEEEECCSC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChhhcCCCEEEECccc
Confidence 35678999999999999999999999999999999997543322111221 123567777774 345689999999997
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc----------------CCCCchhhHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL----------------PLPRMSLYAS 184 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~----------------~~~~~~~Y~a 184 (349)
...... .++++..+++|+.++.++++++... +.++|++||.+.+. +......|+.
T Consensus 102 ~~~~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~ 172 (343)
T 2b69_A 102 ASPPNY-----MYNPIKTLKTNTIGTLNMLGLAKRV----GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDE 172 (343)
T ss_dssp CSHHHH-----TTCHHHHHHHHHHHHHHHHHHHHHH----TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHH
T ss_pred cCchhh-----hhCHHHHHHHHHHHHHHHHHHHHHh----CCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHH
Confidence 543221 1345788999999999999988653 35899999976542 2234567999
Q ss_pred HHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhH-HHH--------hhhcCCCCHHHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWK-EER--------EVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~edvA~~i~~ 255 (349)
+|++.+.+++.++.+.+ ++++++.||.+.++.........-....... ... ......+.++|+|++++.
T Consensus 173 sK~~~E~~~~~~~~~~~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~ 250 (343)
T 2b69_A 173 GKRVAETMCYAYMKQEG--VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA 250 (343)
T ss_dssp HHHHHHHHHHHHHHHHC--CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC--CcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHH
Confidence 99999999999987764 7999999999887753211000000000000 000 011245688999999999
Q ss_pred HHhcC
Q 039397 256 GACRG 260 (349)
Q Consensus 256 l~~~~ 260 (349)
++..+
T Consensus 251 ~~~~~ 255 (343)
T 2b69_A 251 LMNSN 255 (343)
T ss_dssp HHTSS
T ss_pred HHhcC
Confidence 99765
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=167.59 Aligned_cols=205 Identities=13% Similarity=0.072 Sum_probs=141.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC-------CeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-------C-
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK-------ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-------S- 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G-------~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-------~- 108 (349)
.|++++||||||+|+||.+++++|+++| ++|++++|+.++... .....+..+.+|... .
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~ 84 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVE 84 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHh
Confidence 5678999999999999999999999999 899999998754332 123467778888322 2
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCC-C--------
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPL-P-------- 177 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~-~-------- 177 (349)
+++|++|||||.... . +.+++++.+++|+.|+.++++++.+...++ .++||++||.+.+.+. +
T Consensus 85 ~~~d~vih~A~~~~~-----~-~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~ 158 (342)
T 2hrz_A 85 ARPDVIFHLAAIVSG-----E-AELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFH 158 (342)
T ss_dssp TCCSEEEECCCCCHH-----H-HHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCC
T ss_pred cCCCEEEECCccCcc-----c-ccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCC
Confidence 589999999997531 1 235678999999999999999998753221 4799999999776443 2
Q ss_pred --CchhhHHHHHHHHHHHHHHHHHhcCC---eeEEEEe--cCcccCCCCCCc---ccc-ccchhhhhHHHHhhhcCCCCH
Q 039397 178 --RMSLYASAKAALVTFYESLRFELNDE---VGITIAT--HGWIGIEMTKGK---FML-EDGAEMQWKEEREVHVAGGPV 246 (349)
Q Consensus 178 --~~~~Y~asKaal~~l~~~la~el~~~---I~v~~v~--PG~v~T~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~ 246 (349)
....|++||++.+.+++.++.+..-. +|++.+. ||...++...-. ... ..+................++
T Consensus 159 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 238 (342)
T 2hrz_A 159 TTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASP 238 (342)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEeh
Confidence 46789999999999999998775322 6677776 776554321100 000 000000000000011124679
Q ss_pred HHHHHHHHHHHhcC
Q 039397 247 EDFARLIVSGACRG 260 (349)
Q Consensus 247 edvA~~i~~l~~~~ 260 (349)
+|+|++++.++...
T Consensus 239 ~Dva~~~~~~~~~~ 252 (342)
T 2hrz_A 239 RSAVGFLIHGAMID 252 (342)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999754
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.3e-20 Score=170.82 Aligned_cols=206 Identities=13% Similarity=-0.016 Sum_probs=146.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCC-----CeEEEEEecc-------ccCCCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI-----NEVTLVSLNN-------KESKAV 111 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~-----~~~~~~~~d~-------~~~g~i 111 (349)
.+++|+||||||+|+||++++++|+++|++|++++|+..........+.... ..+..+.+|. +...++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 4568999999999999999999999999999999998765443333331110 3577888883 234579
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC-----------Cch
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP-----------RMS 180 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~-----------~~~ 180 (349)
|++||+||...... ..++....+++|+.++.++++++... +.+++|++||.+.+...+ ...
T Consensus 102 d~Vih~A~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~ 173 (351)
T 3ruf_A 102 DHVLHQAALGSVPR-----SIVDPITTNATNITGFLNILHAAKNA---QVQSFTYAASSSTYGDHPALPKVEENIGNPLS 173 (351)
T ss_dssp SEEEECCCCCCHHH-----HHHCHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCS
T ss_pred CEEEECCccCCcch-----hhhCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEecHHhcCCCCCCCCccCCCCCCCC
Confidence 99999999753321 12456789999999999999998654 236999999987764332 246
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc--chhhhhHHH---------HhhhcCCCCHHHH
Q 039397 181 LYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED--GAEMQWKEE---------REVHVAGGPVEDF 249 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~edv 249 (349)
.|+.+|.+.+.+++.++.+.+ ++++++.||.+-.+.......... ......... .......+.++|+
T Consensus 174 ~Y~~sK~~~E~~~~~~~~~~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv 251 (351)
T 3ruf_A 174 PYAVTKYVNEIYAQVYARTYG--FKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNV 251 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC--CCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhC--CCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHH
Confidence 899999999999999998874 789999999887765432100000 000000000 0112245678999
Q ss_pred HHHHHHHHhc
Q 039397 250 ARLIVSGACR 259 (349)
Q Consensus 250 A~~i~~l~~~ 259 (349)
|++++.++..
T Consensus 252 a~a~~~~~~~ 261 (351)
T 3ruf_A 252 IQMNILSALA 261 (351)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhh
Confidence 9999999886
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.1e-19 Score=153.85 Aligned_cols=179 Identities=11% Similarity=0.034 Sum_probs=130.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnA 118 (349)
++|+++||||+|+||++++++|+++|++|++++|++++++... ...+..+.+|. +...++|++||||
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 75 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG------PRPAHVVVGDVLQAADVDKTVAGQDAVIVLL 75 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS------CCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc------CCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence 3479999999999999999999999999999999987654321 23566777772 2235689999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC----CchhhHHHHHHHHHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP----RMSLYASAKAALVTFYE 194 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~----~~~~Y~asKaal~~l~~ 194 (349)
|.... . +.+ ++|+.++.++++++... +.+++|++||...+...+ ....|+.+|++++.+.+
T Consensus 76 ~~~~~----~--~~~------~~n~~~~~~~~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~ 140 (206)
T 1hdo_A 76 GTRND----L--SPT------TVMSEGARNIVAAMKAH---GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLR 140 (206)
T ss_dssp CCTTC----C--SCC------CHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHH
T ss_pred cCCCC----C--Ccc------chHHHHHHHHHHHHHHh---CCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHH
Confidence 97543 1 111 37888888888887643 347999999997765544 56889999999999884
Q ss_pred HHHHHhcCCeeEEEEecCcc-cCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 195 SLRFELNDEVGITIATHGWI-GIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 195 ~la~el~~~I~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
. ..++++++.||.+ .++.......... ..+....++++|+|++++++++++
T Consensus 141 ~------~~i~~~~lrp~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~Dva~~~~~~~~~~ 192 (206)
T 1hdo_A 141 E------SGLKYVAVMPPHIGDQPLTGAYTVTLD---------GRGPSRVISKHDLGHFMLRCLTTD 192 (206)
T ss_dssp H------TCSEEEEECCSEEECCCCCSCCEEESS---------SCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred h------CCCCEEEEeCCcccCCCCCcceEeccc---------CCCCCCccCHHHHHHHHHHHhcCc
Confidence 3 2289999999998 3443221110000 001136788999999999999875
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.3e-19 Score=155.31 Aligned_cols=183 Identities=12% Similarity=0.026 Sum_probs=128.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-----cCCCcceeeecCcCCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-----ESKAVDHLVNTASLGHT 123 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-----~~g~iDvlVnnAg~~~~ 123 (349)
+|+||||+|+||++++++|+++|++|++++|+.+++++.. ...+..+.+|.. ..+++|++|||||....
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~ 75 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTEADLDSVDAVVDALSVPWG 75 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTT
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccHhhcccCCEEEECCccCCC
Confidence 5999999999999999999999999999999987765432 134667777743 35689999999998611
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCC--------------chhhHHHHHHH
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPR--------------MSLYASAKAAL 189 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~--------------~~~Y~asKaal 189 (349)
+ +. .++|+.++.++++++ ++.++++|++||.++..+.+. ...|+.+|++.
T Consensus 76 -------~-~~----~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 139 (224)
T 3h2s_A 76 -------S-GR----GYLHLDFATHLVSLL----RNSDTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQY 139 (224)
T ss_dssp -------S-SC----THHHHHHHHHHHHTC----TTCCCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHH
T ss_pred -------c-ch----hhHHHHHHHHHHHHH----HHcCCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHH
Confidence 1 11 256777766665555 444589999999887765544 67899999998
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+.+ +.+. ... +++++++||.+.++.....+..... .. .........++++|+|++++.++++++
T Consensus 140 e~~-~~~~---~~~~i~~~ivrp~~v~g~~~~~~~~~~~~-~~---~~~~~~~~~i~~~DvA~~~~~~l~~~~ 204 (224)
T 3h2s_A 140 YEY-QFLQ---MNANVNWIGISPSEAFPSGPATSYVAGKD-TL---LVGEDGQSHITTGNMALAILDQLEHPT 204 (224)
T ss_dssp HHH-HHHT---TCTTSCEEEEEECSBCCCCCCCCEEEESS-BC---CCCTTSCCBCCHHHHHHHHHHHHHSCC
T ss_pred HHH-HHHH---hcCCCcEEEEcCccccCCCcccCceeccc-cc---ccCCCCCceEeHHHHHHHHHHHhcCcc
Confidence 854 2222 234 9999999999988732221110000 00 001122357899999999999999864
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.9e-20 Score=170.34 Aligned_cols=198 Identities=16% Similarity=0.036 Sum_probs=141.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEeccc-------cCCCcceeeec
Q 039397 48 KVVIITGASSDIGEQIAYEYAKR--KANLVLVARRENR-LQGSTIDEYNPINEVTLVSLNNK-------ESKAVDHLVNT 117 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d~~-------~~g~iDvlVnn 117 (349)
|+||||||+|+||++++++|+++ |++|++++|+... ..+...++. ...+..+.+|.. ....+|++|||
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAAKADAIVHY 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc--cCCeEEEECCCCCHHHHHHHhhcCCEEEEC
Confidence 68999999999999999999999 8999999997532 111112221 245777888832 23467999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------------------
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL----------------------- 174 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~----------------------- 174 (349)
||..... . ..++++..+++|+.|+.++++++.+. +++||++||.+.+.
T Consensus 83 A~~~~~~----~-~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~ 153 (348)
T 1oc2_A 83 AAESHND----N-SLNDPSPFIHTNFIGTYTLLEAARKY----DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET 153 (348)
T ss_dssp CSCCCHH----H-HHHCCHHHHHHHTHHHHHHHHHHHHH----TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred CcccCcc----c-hhhCHHHHHHHHHHHHHHHHHHHHHh----CCeEEEecccceeCCCcccccccccccccCCCcCCCC
Confidence 9975321 1 12456789999999999999999875 34999999976442
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhh-hHHH--------HhhhcCCCC
Q 039397 175 PLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQ-WKEE--------REVHVAGGP 245 (349)
Q Consensus 175 ~~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~ 245 (349)
+.+....|+++|++.+.+++.++.+++ ++++++.||.+.++....... -..... .... .......+.
T Consensus 154 ~~~~~~~Y~~sK~~~e~~~~~~~~~~g--i~~~ilrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 229 (348)
T 1oc2_A 154 NYNPSSPYSSTKAASDLIVKAWVRSFG--VKATISNCSNNYGPYQHIEKF--IPRQITNILAGIKPKLYGEGKNVRDWIH 229 (348)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEESTTCCTTSH--HHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhC--CCEEEEeeceeeCCCCCccch--HHHHHHHHHcCCCceEecCCCceEeeEE
Confidence 223457899999999999999998874 899999999998886532100 000000 0000 011235677
Q ss_pred HHHHHHHHHHHHhcC
Q 039397 246 VEDFARLIVSGACRG 260 (349)
Q Consensus 246 ~edvA~~i~~l~~~~ 260 (349)
++|+|++++++++++
T Consensus 230 v~Dva~~~~~~~~~~ 244 (348)
T 1oc2_A 230 TNDHSTGVWAILTKG 244 (348)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhCC
Confidence 999999999999864
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=169.10 Aligned_cols=208 Identities=13% Similarity=0.018 Sum_probs=133.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchh-----hhHHHHhcCCCCeEEEEEeccccC-------C--Ccc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL-----QGSTIDEYNPINEVTLVSLNNKES-------K--AVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l-----~~~~~~~~~~~~~~~~~~~d~~~~-------g--~iD 112 (349)
+|+++||||+|+||++++++|+++|++|++++|+.+.. +....+.......+..+.+|.... . ++|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 37899999999999999999999999999999986542 111111100123567777773221 1 579
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchh
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSL 181 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~ 181 (349)
++|||||..... .+.++++..+++|+.|+.++++++.+.+.+++++||++||.+.+... .....
T Consensus 81 ~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~ 155 (372)
T 1db3_A 81 EVYNLGAMSHVA-----VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSP 155 (372)
T ss_dssp EEEECCCCCTTT-----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSH
T ss_pred EEEECCcccCcc-----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCCh
Confidence 999999975432 12356788999999999999999988765445799999998765321 23678
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc-cchhhh-hH---------HHHhhhcCCCCHHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE-DGAEMQ-WK---------EEREVHVAGGPVEDFA 250 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~-~~~~~~-~~---------~~~~~~~~~~~~edvA 250 (349)
|++||++.+.+++.++.+++ +.+..+.|..+..+.....+... -..... .. .........+.++|+|
T Consensus 156 Y~~sK~~~e~~~~~~~~~~~--~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva 233 (372)
T 1db3_A 156 YAVAKLYAYWITVNYRESYG--MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYV 233 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHH
Confidence 99999999999999998876 44445555433322211100000 000000 00 0001123467889999
Q ss_pred HHHHHHHhcCC
Q 039397 251 RLIVSGACRGD 261 (349)
Q Consensus 251 ~~i~~l~~~~~ 261 (349)
++++.++.++.
T Consensus 234 ~a~~~~~~~~~ 244 (372)
T 1db3_A 234 KMQWMMLQQEQ 244 (372)
T ss_dssp HHHHHTTSSSS
T ss_pred HHHHHHHhcCC
Confidence 99999997653
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.6e-20 Score=175.21 Aligned_cols=170 Identities=15% Similarity=0.038 Sum_probs=122.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhh-----------------hHHHHhcCCCCeEEEEEeccc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----------------GSTIDEYNPINEVTLVSLNNK 106 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~-----------------~~~~~~~~~~~~~~~~~~d~~ 106 (349)
..++++||||||+|+||++++++|+++|++|++++|+..... ............+.++.+|..
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 456789999999999999999999999999999998643211 111100001235677788832
Q ss_pred c-------CC--CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc---
Q 039397 107 E-------SK--AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL--- 174 (349)
Q Consensus 107 ~-------~g--~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~--- 174 (349)
. .. ++|++|||||........+ +.+++..++++|+.|+.++++++.+.- .+.+||++||.+.+.
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~~~~V~~SS~~vyg~~~ 163 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMI--DRSRAVYTQHNNVIGTLNVLFAIKEFG--EECHLVKLGTMGEYGTPN 163 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCCCHHHHTS--CHHHHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEECCGGGGCCCS
T ss_pred CHHHHHHHHhccCCCEEEECCCCCCccchhh--CccchhhhHHHHHHHHHHHHHHHHHhC--CCcEEEEeCcHHHhCCCC
Confidence 2 12 4899999999764332222 335567899999999999999987542 114999999986542
Q ss_pred ---------------------CCCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCC
Q 039397 175 ---------------------PLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMT 219 (349)
Q Consensus 175 ---------------------~~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~ 219 (349)
+......|++||++.+.+++.++.+++ ++++++.||.+.++..
T Consensus 164 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g--i~~~ivrp~~v~Gp~~ 227 (404)
T 1i24_A 164 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVKT 227 (404)
T ss_dssp SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECEEECSCC
T ss_pred CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeCCCC
Confidence 223456899999999999999988874 8999999999988754
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=164.85 Aligned_cols=197 Identities=13% Similarity=0.100 Sum_probs=136.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc------CCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE------SKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~------~g~iDvlVnnAg~~ 121 (349)
|+||||||+|+||++++++|+++|+.|++..|+....+.. ...+..+.+|... ..++|++||+||..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~ 74 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-------NEAARLVKADLAADDIKDYLKGAEEVWHIAANP 74 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-------CTTEEEECCCTTTSCCHHHHTTCSEEEECCCCC
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-------CCCcEEEECcCChHHHHHHhcCCCEEEECCCCC
Confidence 5799999999999999999999995555555554433221 2346667777432 24789999999954
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCCCchhhHHHHHHHH
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLPRMSLYASAKAALV 190 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~~~~~Y~asKaal~ 190 (349)
.. .. +.+++++.+++|+.|+.++++++... +.++||++||.+.+. +......|+.+|++.+
T Consensus 75 ~~----~~-~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e 146 (313)
T 3ehe_A 75 DV----RI-GAENPDEIYRNNVLATYRLLEAMRKA---GVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACE 146 (313)
T ss_dssp CC----C--CCCCHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred Ch----hh-hhhCHHHHHHHHHHHHHHHHHHHHHc---CCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 22 21 23678999999999999999986542 347999999987652 3345678999999999
Q ss_pred HHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc------c-hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 191 TFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED------G-AEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 191 ~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
.+++.++.+++ ++++++.|+.+.++.........- . ...............+.++|+|++++.++++..
T Consensus 147 ~~~~~~~~~~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~ 222 (313)
T 3ehe_A 147 ALIESYCHTFD--MQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDE 222 (313)
T ss_dssp HHHHHHHHHTT--CEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhcC--CCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCC
Confidence 99999998874 799999999998775432100000 0 000000001112356778999999999998543
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=157.48 Aligned_cols=186 Identities=13% Similarity=0.025 Sum_probs=133.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCCeEEEEEecc------ccCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLVSLNN------KESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~------~~~g~iDvlVnn 117 (349)
.+|+++||||+|+||++++++|+++|+ +|++++|++++ . ...+..+.+|. ++.- +|++|||
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~---------~~~~~~~~~D~~~~~~~~~~~-~d~vi~~ 72 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-E---------HPRLDNPVGPLAELLPQLDGS-IDTAFCC 72 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-C---------CTTEECCBSCHHHHGGGCCSC-CSEEEEC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-c---------CCCceEEeccccCHHHHHHhh-hcEEEEC
Confidence 468999999999999999999999998 99999998765 1 12455556661 1111 8999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLR 197 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la 197 (349)
||.... +.+++++.+++|+.++.++++++.+. +.+++|++||..++.+ ....|+.+|++++.+++.+
T Consensus 73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e~~~~~~- 139 (215)
T 2a35_A 73 LGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALEM---GARHYLVVSALGADAK--SSIFYNRVKGELEQALQEQ- 139 (215)
T ss_dssp CCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHHT---TCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHTTS-
T ss_pred eeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHHc---CCCEEEEECCcccCCC--CccHHHHHHHHHHHHHHHc-
Confidence 997532 12457889999999999999998653 3368999999887643 3468999999999988652
Q ss_pred HHhcCCee-EEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 198 FELNDEVG-ITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 198 ~el~~~I~-v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
.++ +++++||.+.++.....+...-..... .........++++|+|++++.++.++..
T Consensus 140 -----~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~Dva~~~~~~~~~~~~ 198 (215)
T 2a35_A 140 -----GWPQLTIARPSLLFGPREEFRLAEILAAPIA--RILPGKYHGIEACDLARALWRLALEEGK 198 (215)
T ss_dssp -----CCSEEEEEECCSEESTTSCEEGGGGTTCCCC------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred -----CCCeEEEEeCceeeCCCCcchHHHHHHHhhh--hccCCCcCcEeHHHHHHHHHHHHhcCCC
Confidence 378 999999999887543111000000000 0000012356779999999999988753
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.1e-20 Score=171.38 Aligned_cols=203 Identities=12% Similarity=0.045 Sum_probs=134.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH--HHhcCCCCeEEEEEecccc-------CCCcceeeec
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST--IDEYNPINEVTLVSLNNKE-------SKAVDHLVNT 117 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~--~~~~~~~~~~~~~~~d~~~-------~g~iDvlVnn 117 (349)
+|+||||||+|+||++++++|+++|++|+++.|+.++.+... .++. ....+.++.+|... ..++|++||+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 689999999999999999999999999999999876543221 1222 12356777787332 3468999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC---------------------
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL--------------------- 176 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~--------------------- 176 (349)
||.... . ..+..++.+++|+.|+.++++++.+.. +.++||++||.++..+.
T Consensus 88 A~~~~~---~---~~~~~~~~~~~nv~gt~~ll~aa~~~~--~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~ 159 (338)
T 2rh8_A 88 ATPVHF---A---SEDPENDMIKPAIQGVVNVMKACTRAK--SVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLT 159 (338)
T ss_dssp SSCCCC---------------CHHHHHHHHHHHHHHHHCT--TCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC----
T ss_pred CCccCC---C---CCCcHHHHHHHHHHHHHHHHHHHHHcC--CcCEEEEEecHHHeecCCcCCCCcccChhhccchhhcc
Confidence 986421 1 112224589999999999999998653 23699999998743210
Q ss_pred C---CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc--------chhhhhHHH-----Hhhh
Q 039397 177 P---RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED--------GAEMQWKEE-----REVH 240 (349)
Q Consensus 177 ~---~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~~-----~~~~ 240 (349)
| ....|++||++.+.+++.++.+.+ ++++++.||.+.++.......... +....+... ....
T Consensus 160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 237 (338)
T 2rh8_A 160 SAKPPTWGYPASKTLAEKAAWKFAEENN--IDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGS 237 (338)
T ss_dssp ---CCCCCCTTSCCHHHHHHHHHHHHHT--CCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSS
T ss_pred ccCCccchHHHHHHHHHHHHHHHHHHcC--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCc
Confidence 0 111599999999998888776543 899999999999986543211100 000000000 0001
Q ss_pred cCCCCHHHHHHHHHHHHhcC
Q 039397 241 VAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 241 ~~~~~~edvA~~i~~l~~~~ 260 (349)
...+.++|+|++++++++++
T Consensus 238 ~~~i~v~Dva~a~~~~~~~~ 257 (338)
T 2rh8_A 238 VSIAHVEDVCRAHIFVAEKE 257 (338)
T ss_dssp EEEEEHHHHHHHHHHHHHCT
T ss_pred ccEEEHHHHHHHHHHHHcCC
Confidence 14789999999999999764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=168.14 Aligned_cols=198 Identities=15% Similarity=0.045 Sum_probs=140.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHc---C---CeEEEEecCcch--hhhHHHHhcCCCCeEEEEEecc-------ccCCCcce
Q 039397 49 VVIITGASSDIGEQIAYEYAKR---K---ANLVLVARRENR--LQGSTIDEYNPINEVTLVSLNN-------KESKAVDH 113 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~---G---~~Vv~~~r~~~~--l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDv 113 (349)
++|||||+|+||++++++|+++ | ++|++++|+... .+.+ .++. ....+.++.+|. +..+++|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 79 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLARELRGVDA 79 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence 6999999999999999999997 8 999999996521 1111 1221 124577788883 23468999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCCCchhh
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLPRMSLY 182 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~~~~~Y 182 (349)
+|||||...... ..++++..+++|+.++.++++++.+.. .++||++||.+.+. +......|
T Consensus 80 Vih~A~~~~~~~-----~~~~~~~~~~~Nv~~~~~l~~a~~~~~---~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y 151 (337)
T 1r6d_A 80 IVHFAAESHVDR-----SIAGASVFTETNVQGTQTLLQCAVDAG---VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPY 151 (337)
T ss_dssp EEECCSCCCHHH-----HHHCCHHHHHHHTHHHHHHHHHHHHTT---CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHH
T ss_pred EEECCCccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHHcC---CCEEEEecchHHhCCCCCCCCCCCCCCCCCCch
Confidence 999999753211 124467899999999999999998753 36999999976542 23456789
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHH---------HhhhcCCCCHHHHHHHH
Q 039397 183 ASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE---------REVHVAGGPVEDFARLI 253 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~edvA~~i 253 (349)
+.||++.+.+++.++.+++ ++++++.||.+.++....... -......... .......+.++|+|+++
T Consensus 152 ~~sK~~~e~~~~~~~~~~g--~~~~ilrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 227 (337)
T 1r6d_A 152 AASKAGSDLVARAYHRTYG--LDVRITRCCNNYGPYQHPEKL--IPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI 227 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHC--CCEEEEEECEEECTTCCTTSH--HHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHC--CCEEEEEeeeeECCCCCCCCh--HHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHH
Confidence 9999999999999998864 789999999998876431100 0000000000 00112456789999999
Q ss_pred HHHHhcC
Q 039397 254 VSGACRG 260 (349)
Q Consensus 254 ~~l~~~~ 260 (349)
+.+++++
T Consensus 228 ~~~~~~~ 234 (337)
T 1r6d_A 228 ALVLAGG 234 (337)
T ss_dssp HHHHHHC
T ss_pred HHHHhCC
Confidence 9999764
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=169.11 Aligned_cols=206 Identities=14% Similarity=0.004 Sum_probs=136.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhh-hHHHHhcCCCCeEEEEEeccccC---------CC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQ-GSTIDEYNPINEVTLVSLNNKES---------KA 110 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~---------g~ 110 (349)
+++++++||||||+|+||.+++++|+++| ++|++.+|...... .....+ .....+.++.+|.... .+
T Consensus 20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 98 (346)
T 4egb_A 20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKERD 98 (346)
T ss_dssp ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence 35678899999999999999999999999 77777777642211 111111 1224678888883221 24
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC------------C
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP------------R 178 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~------------~ 178 (349)
+|++||+||...... ..++++..+++|+.|+.++++++... +.+++|++||.+.+...+ .
T Consensus 99 ~d~Vih~A~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p 170 (346)
T 4egb_A 99 VQVIVNFAAESHVDR-----SIENPIPFYDTNVIGTVTLLELVKKY---PHIKLVQVSTDEVYGSLGKTGRFTEETPLAP 170 (346)
T ss_dssp CCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS---TTSEEEEEEEGGGGCCCCSSCCBCTTSCCCC
T ss_pred CCEEEECCcccchhh-----hhhCHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEeCchHHhCCCCcCCCcCCCCCCCC
Confidence 999999999864332 22456789999999999999998754 336899999986654332 2
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHH---------HhhhcCCCCHHHH
Q 039397 179 MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE---------REVHVAGGPVEDF 249 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~edv 249 (349)
...|+.+|.+.+.+++.++.+.+ ++++++.||.+.++........ ......... .......+.++|+
T Consensus 171 ~~~Y~~sK~~~E~~~~~~~~~~g--~~~~ilRp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 246 (346)
T 4egb_A 171 NSPYSSSKASADMIALAYYKTYQ--LPVIVTRCSNNYGPYQYPEKLI--PLMVTNALEGKKLPLYGDGLNVRDWLHVTDH 246 (346)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECEEESTTCCTTSHH--HHHHHHHHTTCCCEEETTSCCEECEEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHhC--CCEEEEeecceeCcCCCccchH--HHHHHHHHcCCCceeeCCCCeEEeeEEHHHH
Confidence 47899999999999999998764 7899999999887754221000 000000000 0111234568999
Q ss_pred HHHHHHHHhcCC
Q 039397 250 ARLIVSGACRGD 261 (349)
Q Consensus 250 A~~i~~l~~~~~ 261 (349)
|++++.++.++.
T Consensus 247 a~a~~~~~~~~~ 258 (346)
T 4egb_A 247 CSAIDVVLHKGR 258 (346)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHhcCC
Confidence 999999998764
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=168.66 Aligned_cols=206 Identities=11% Similarity=-0.087 Sum_probs=142.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCccee
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHL 114 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvl 114 (349)
.++++++|+||||+|+||++++++|+++| ++|++++|+.+...+ .+. ....+.++.+|. +...++|++
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~V 103 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQDEYDYV 103 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCSCCSEE
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhhCCCEE
Confidence 35788999999999999999999999999 999999998654321 111 134577777772 234589999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc----------------CC-C
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL----------------PL-P 177 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~----------------~~-~ 177 (349)
|||||...... ..++++..+++|+.++.++++++... .+.+++|++||.+.+. +. .
T Consensus 104 ih~A~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~ 176 (377)
T 2q1s_A 104 FHLATYHGNQS-----SIHDPLADHENNTLTTLKLYERLKHF--KRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHN 176 (377)
T ss_dssp EECCCCSCHHH-----HHHCHHHHHHHHTHHHHHHHHHHTTC--SSCCEEEEEEEC--------------CCCCCCCSSC
T ss_pred EECCCccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEeCCHHHcCCCCCCCcCcccccccccccC
Confidence 99999753221 12456889999999999999998643 0236899999976431 22 3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCC---------CCcc--ccccchhhhhH---------HHH
Q 039397 178 RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMT---------KGKF--MLEDGAEMQWK---------EER 237 (349)
Q Consensus 178 ~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~---------~~~~--~~~~~~~~~~~---------~~~ 237 (349)
....|+.+|++.+.+++.++.+.+ ++++++.||.+.++.. .... ...-....... ...
T Consensus 177 ~~~~Y~~sK~~~E~~~~~~~~~~g--i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g 254 (377)
T 2q1s_A 177 NDSPYSMSKIFGEFYSVYYHKQHQ--LPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGG 254 (377)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGG
T ss_pred CCCchHHHHHHHHHHHHHHHHHhC--CCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCC
Confidence 457899999999999999988764 8999999999988754 1100 00000000000 000
Q ss_pred hhhcCCCCHHHHHHH-HHHHHhcCC
Q 039397 238 EVHVAGGPVEDFARL-IVSGACRGD 261 (349)
Q Consensus 238 ~~~~~~~~~edvA~~-i~~l~~~~~ 261 (349)
......+.++|+|++ ++.+++++.
T Consensus 255 ~~~~~~i~v~Dva~a~i~~~~~~~~ 279 (377)
T 2q1s_A 255 VATRDFIFVEDVANGLIACAADGTP 279 (377)
T ss_dssp CCEECCEEHHHHHHHHHHHHHHCCT
T ss_pred CeEEeeEEHHHHHHHHHHHHHhcCC
Confidence 112345668999999 999998754
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=169.72 Aligned_cols=151 Identities=13% Similarity=0.017 Sum_probs=115.4
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcce
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDH 113 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDv 113 (349)
.+.+.++|+||||||+|+||.+++++|+++|++|++++|+.+. ..+..+.+|. +...++|+
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIMGVSA 80 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHTTCSE
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHhCCCE
Confidence 3457788999999999999999999999999999999998754 2344556662 22347999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-------------CCCch
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-------------LPRMS 180 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-------------~~~~~ 180 (349)
+||+||.... +.+.++..+++|+.|+.++++++... +.++||++||...+.. .....
T Consensus 81 vih~A~~~~~-------~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~ 150 (347)
T 4id9_A 81 VLHLGAFMSW-------APADRDRMFAVNVEGTRRLLDAASAA---GVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNS 150 (347)
T ss_dssp EEECCCCCCS-------SGGGHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCS
T ss_pred EEECCcccCc-------chhhHHHHHHHHHHHHHHHHHHHHHc---CCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCC
Confidence 9999997532 22456899999999999999998652 3469999999765432 23567
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCccc
Q 039397 181 LYASAKAALVTFYESLRFELNDEVGITIATHGWIG 215 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~ 215 (349)
.|+.+|.+.+.+++.++.+.+ ++++++.|+.+.
T Consensus 151 ~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~ 183 (347)
T 4id9_A 151 PYGLTKLLGEELVRFHQRSGA--METVILRFSHTQ 183 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS--SEEEEEEECEEE
T ss_pred hHHHHHHHHHHHHHHHHHhcC--CceEEEccceEe
Confidence 899999999999999988753 899999999887
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-18 Score=164.54 Aligned_cols=162 Identities=11% Similarity=0.001 Sum_probs=121.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHH-HcCCeEEEEecCcch---------hhhHHH---HhcCC--CCe---EEEEEecc---
Q 039397 47 DKVVIITGASSDIGEQIAYEYA-KRKANLVLVARRENR---------LQGSTI---DEYNP--INE---VTLVSLNN--- 105 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la-~~G~~Vv~~~r~~~~---------l~~~~~---~~~~~--~~~---~~~~~~d~--- 105 (349)
+++||||||+|+||++++++|+ ++|++|++++|+... .+.+.. ++... ... +..+.+|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 3589999999999999999999 999999999997654 222221 11110 113 67778882
Q ss_pred -------ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC-
Q 039397 106 -------KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP- 177 (349)
Q Consensus 106 -------~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~- 177 (349)
+.++++|++|||||...... ..++++.++++|+.|+.++++++... +.++||++||.+.+....
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~iv~~SS~~v~g~~~~ 153 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGE-----SVRDPLKYYDNNVVGILRLLQAMLLH---KCDKIIFSSSAAIFGNPTM 153 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGTBSCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCc-----chhhHHHHHHHHhHHHHHHHHHHHHh---CCCEEEEECCHHHhCCCCc
Confidence 22356999999999764321 12457889999999999999987542 337999999976543221
Q ss_pred -----------------CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCC
Q 039397 178 -----------------RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEM 218 (349)
Q Consensus 178 -----------------~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~ 218 (349)
....|++||++.+.+++.++.+++ ++++++.||.+..+.
T Consensus 154 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g--i~~~ilRp~~v~G~~ 209 (397)
T 1gy8_A 154 GSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG--IKGICLRYFNACGAH 209 (397)
T ss_dssp -----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECEEECCC
T ss_pred ccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHC--CcEEEEeccceeCCC
Confidence 157899999999999999998874 899999999887664
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.4e-19 Score=153.28 Aligned_cols=182 Identities=12% Similarity=0.098 Sum_probs=119.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-----cCCCcceeeecCcCCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-----ESKAVDHLVNTASLGHT 123 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-----~~g~iDvlVnnAg~~~~ 123 (349)
+|+||||+|+||++++++|+++|++|++++|+.++++... ..+..+.+|.. ..+++|++|||||....
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~ 74 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTLSDLSDQNVVVDAYGISPD 74 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTT
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhhhhhcCCCEEEECCcCCcc
Confidence 5999999999999999999999999999999987765432 34667777743 34689999999997321
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCC------------chhhHHHHHHHHH
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPR------------MSLYASAKAALVT 191 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~------------~~~Y~asKaal~~ 191 (349)
..++|+.++.++++++... +.+++|++||..++.+.+. ...|+.+|++.+.
T Consensus 75 --------------~~~~~~~~~~~l~~a~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~ 137 (221)
T 3ew7_A 75 --------------EAEKHVTSLDHLISVLNGT---VSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQ 137 (221)
T ss_dssp --------------TTTSHHHHHHHHHHHHCSC---CSSEEEEECCCC-------------------CCCSCCHHHHHHH
T ss_pred --------------ccchHHHHHHHHHHHHHhc---CCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHH
Confidence 1234666666666655432 2489999999988655442 4569999999988
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCC-ccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKG-KFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+ +.+.. ... +++++++||.+.++.... .+..... ... ........++++|+|++++.++.+++
T Consensus 138 ~-~~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~-~~~---~~~~~~~~i~~~Dva~~~~~~l~~~~ 202 (221)
T 3ew7_A 138 L-EHLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKD-HLL---FGSDGNSFISMEDYAIAVLDEIERPN 202 (221)
T ss_dssp H-HHHHT--TTTTSCEEEEECSSCCCCC-------------------------CCCHHHHHHHHHHHHHSCS
T ss_pred H-HHHHh--hccCccEEEEeCcceecCCCccCceEeccc-cce---ecCCCCceEeHHHHHHHHHHHHhCcc
Confidence 7 33332 133 999999999998772111 0100000 000 00112357889999999999999864
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.5e-19 Score=164.02 Aligned_cols=162 Identities=13% Similarity=0.026 Sum_probs=120.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch------hhhHHHHhcC-CCCeEEEEEecccc-------CC--C
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR------LQGSTIDEYN-PINEVTLVSLNNKE-------SK--A 110 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~------l~~~~~~~~~-~~~~~~~~~~d~~~-------~g--~ 110 (349)
+|+|+||||+|+||++++++|+++|++|++++|+... ..+...++.. ....+..+.+|... .. +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 4789999999999999999999999999999986543 2222222211 12346677777321 12 7
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC------------CCC
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP------------LPR 178 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~------------~~~ 178 (349)
+|++|||||...... ..+++++.+++|+.|+.++++++... +.++||++||.+.+.. .|.
T Consensus 82 ~d~vih~A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~ 153 (348)
T 1ek6_A 82 FMAVIHFAGLKAVGE-----SVQKPLDYYRVNLTGTIQLLEIMKAH---GVKNLVFSSSATVYGNPQYLPLDEAHPTGGC 153 (348)
T ss_dssp EEEEEECCSCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred CCEEEECCCCcCccc-----hhhchHHHHHHHHHHHHHHHHHHHHh---CCCEEEEECcHHHhCCCCCCCcCCCCCCCCC
Confidence 999999999754321 12456789999999999999976532 3379999999876532 133
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCC
Q 039397 179 MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE 217 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~ 217 (349)
...|+.+|++.+.+++.++.+ +..++++.+.|+.+-.+
T Consensus 154 ~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 154 TNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGA 191 (348)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECC
T ss_pred CCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCC
Confidence 678999999999999999988 43388999999877655
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.4e-20 Score=167.71 Aligned_cols=196 Identities=13% Similarity=0.026 Sum_probs=134.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-------C--CCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-------S--KAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-------~--g~iDvlVnnAg 119 (349)
++|||||+|+||++++++|+++|++|++++|..+...+ .+. ..+..+.+|... . .++|++|||||
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~ 75 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NVP---KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA 75 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GSC---TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hcc---cCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence 69999999999999999999999999999985432211 111 134455666211 1 26899999999
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-------------CCCchhhHHHH
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-------------LPRMSLYASAK 186 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-------------~~~~~~Y~asK 186 (349)
..... . +.++++..+++|+.|+.++++++... +.++||++||.++..+ ......|++||
T Consensus 76 ~~~~~----~-~~~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK 147 (311)
T 2p5y_A 76 QASVK----V-SVEDPVLDFEVNLLGGLNLLEACRQY---GVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASK 147 (311)
T ss_dssp CCCHH----H-HHHCHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHH
T ss_pred ccCch----h-hhhCHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHH
Confidence 75321 1 23557889999999999999998642 2379999999822211 12457899999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc-chhhhhHHHH--------------hhhcCCCCHHHHHH
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED-GAEMQWKEER--------------EVHVAGGPVEDFAR 251 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~edvA~ 251 (349)
++++.+++.++.+.+ ++++++.||.+.++.......... .......... ......+.++|+|+
T Consensus 148 ~~~e~~~~~~~~~~~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ 225 (311)
T 2p5y_A 148 AAFEHYLSVYGQSYG--LKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE 225 (311)
T ss_dssp HHHHHHHHHHHHHHC--CCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHH
T ss_pred HHHHHHHHHHHHHcC--CCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHH
Confidence 999999999998864 799999999998886432110000 0000000000 01123467899999
Q ss_pred HHHHHHhcC
Q 039397 252 LIVSGACRG 260 (349)
Q Consensus 252 ~i~~l~~~~ 260 (349)
+++.+++++
T Consensus 226 a~~~~~~~~ 234 (311)
T 2p5y_A 226 AHALALFSL 234 (311)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhCC
Confidence 999999865
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=163.07 Aligned_cols=197 Identities=13% Similarity=0.051 Sum_probs=134.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------c--ccCCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------N--KESKA 110 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~--~~~g~ 110 (349)
++++|+|+||||+|+||++++++|+++| ++|++++|+...... ..+... . +.+| . ..+++
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~~~~--~---~~~d~~~~~~~~~~~~~~~~~~ 115 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNLVDL--N---IADYMDKEDFLIQIMAGEEFGD 115 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG--GGTTTS--C---CSEEEEHHHHHHHHHTTCCCSS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh--hcccCc--e---EeeecCcHHHHHHHHhhcccCC
Confidence 4678999999999999999999999999 999999998654211 111110 1 2222 1 12347
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCC-----------c
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPR-----------M 179 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~-----------~ 179 (349)
+|++|||||.... ..++++..+++|+.++.++++++.+. +. ++|++||.+.+...+. .
T Consensus 116 ~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~---~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~ 184 (357)
T 2x6t_A 116 VEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER---EI-PFLYASSAATYGGRTSDFIESREYEKPL 184 (357)
T ss_dssp CCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH---TC-CEEEEEEGGGGCSCSSCCCSSGGGCCCS
T ss_pred CCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc---CC-eEEEEcchHHhCCCCCCCcCCcCCCCCC
Confidence 9999999997543 12457899999999999999999763 33 8999999876543322 5
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhh------------HHHHhh-hcCCCCH
Q 039397 180 SLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQW------------KEEREV-HVAGGPV 246 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~ 246 (349)
..|+.+|++.+.+++.++.+.+ ++++++.||.+.++........ ......+ ...... ....+.+
T Consensus 185 ~~Y~~sK~~~E~~~~~~~~~~g--~~~~ilRp~~v~Gp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 261 (357)
T 2x6t_A 185 NVFGYSKFLFDEYVRQILPEAN--SQIVGFRYFNVYGPREGHKGSM-ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV 261 (357)
T ss_dssp SHHHHHHHHHHHHHHHHGGGCS--SCEEEEEECEEESSSCTTCGGG-SCHHHHHHHHHHTTCCCEEETTGGGCEECEEEH
T ss_pred ChhHHHHHHHHHHHHHHHHHcC--CCEEEEecCeEECCCCCCCccc-chHHHHHHHHHHcCCCcEEeCCCCcceEccEEH
Confidence 6899999999999999886643 8999999999987753310000 0000000 001112 3356789
Q ss_pred HHHHHHHHHHHhcCC
Q 039397 247 EDFARLIVSGACRGD 261 (349)
Q Consensus 247 edvA~~i~~l~~~~~ 261 (349)
+|+|++++.+++++.
T Consensus 262 ~Dva~ai~~~~~~~~ 276 (357)
T 2x6t_A 262 GDVADVNLWFLENGV 276 (357)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999998754
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.8e-19 Score=164.74 Aligned_cols=196 Identities=19% Similarity=0.021 Sum_probs=130.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-------C--CCcce
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-------S--KAVDH 113 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-------~--g~iDv 113 (349)
..+++++||||||+|+||++++++|+++|++|++++|+.....+. +.. ...+.++.+|... . +++|+
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD-HPNLTFVEGSIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC-CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh-cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence 356788999999999999999999999999999999986543211 111 1356777787221 1 35999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc----C---------CCCch
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL----P---------LPRMS 180 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~----~---------~~~~~ 180 (349)
+|||||..... ..++++ +++|+.++.++++++.+. +.++||++||.+.+. . .|...
T Consensus 93 vih~A~~~~~~------~~~~~~--~~~N~~~~~~l~~a~~~~---~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~ 161 (333)
T 2q1w_A 93 VVHTAASYKDP------DDWYND--TLTNCVGGSNVVQAAKKN---NVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANS 161 (333)
T ss_dssp EEECCCCCSCT------TCHHHH--HHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTC
T ss_pred EEECceecCCC------ccCChH--HHHHHHHHHHHHHHHHHh---CCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCC
Confidence 99999976432 123444 999999999999999763 347999999987654 2 23227
Q ss_pred hhHHHHHHHHHHHHH-HHHHhcCCeeEEEEecCcccCCCCCCcccccc-ch--hh-hhHHHHhhhcCCCCHHHHHHHHHH
Q 039397 181 LYASAKAALVTFYES-LRFELNDEVGITIATHGWIGIEMTKGKFMLED-GA--EM-QWKEEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 181 ~Y~asKaal~~l~~~-la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~-~~--~~-~~~~~~~~~~~~~~~edvA~~i~~ 255 (349)
.|+++|++.+.+++. ++ .++.+.|+.+..+.........- .. .. .... .......+.++|+|+++++
T Consensus 162 ~Y~~sK~~~E~~~~~s~~-------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~ 233 (333)
T 2q1w_A 162 SYAISKSANEDYLEYSGL-------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVR 233 (333)
T ss_dssp HHHHHHHHHHHHHHHHTC-------CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhhC-------CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHH
Confidence 899999999999988 65 44566666555443110000000 00 00 0000 1123456789999999999
Q ss_pred HHhcCC
Q 039397 256 GACRGD 261 (349)
Q Consensus 256 l~~~~~ 261 (349)
+++++.
T Consensus 234 ~~~~~~ 239 (333)
T 2q1w_A 234 AVDGVG 239 (333)
T ss_dssp HHTTCC
T ss_pred HHhcCC
Confidence 998754
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=161.90 Aligned_cols=205 Identities=10% Similarity=-0.057 Sum_probs=138.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH-HHHhcCCCCeEEEEEeccccC-------C--Ccceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS-TIDEYNPINEVTLVSLNNKES-------K--AVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~-------g--~iDvlV 115 (349)
.+++||||||+|+||++++++|+++|++|++++|+.+..... ...+. ....+..+.+|.... . ++|++|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVY 91 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence 467999999999999999999999999999999987653211 11111 223577778883221 1 579999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCC-----------CchhhH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLP-----------RMSLYA 183 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~-----------~~~~Y~ 183 (349)
||||...... ..++++..+++|+.|+.++++++.+. + .+++|++||.+.+.+.+ ....|+
T Consensus 92 h~A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~ 163 (335)
T 1rpn_A 92 NLAAQSFVGA-----SWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYG 163 (335)
T ss_dssp ECCSCCCHHH-----HTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred ECccccchhh-----hhhChHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhH
Confidence 9999753211 12456889999999999999998754 3 36999999987654322 246899
Q ss_pred HHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc-cchhhh-hHHH---------HhhhcCCCCHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE-DGAEMQ-WKEE---------REVHVAGGPVEDFARL 252 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~-~~~~~~-~~~~---------~~~~~~~~~~edvA~~ 252 (349)
.+|++.+.+++.++.+++ +.++.+.|+.+..+......... -..... .... .......+.++|+|++
T Consensus 164 ~sK~~~e~~~~~~~~~~~--~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a 241 (335)
T 1rpn_A 164 VAKLYGHWITVNYRESFG--LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA 241 (335)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC--CcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHH
Confidence 999999999999998775 56777888776555322111000 000000 0000 0111245678999999
Q ss_pred HHHHHhcCC
Q 039397 253 IVSGACRGD 261 (349)
Q Consensus 253 i~~l~~~~~ 261 (349)
++.++.++.
T Consensus 242 ~~~~~~~~~ 250 (335)
T 1rpn_A 242 MWLMLQQDK 250 (335)
T ss_dssp HHHHHHSSS
T ss_pred HHHHHhcCC
Confidence 999998753
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.5e-19 Score=166.31 Aligned_cols=209 Identities=15% Similarity=0.062 Sum_probs=135.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-----hhhHHHHhcCCCC-eEEEEEeccccC-------C--Ccc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-----LQGSTIDEYNPIN-EVTLVSLNNKES-------K--AVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-----l~~~~~~~~~~~~-~~~~~~~d~~~~-------g--~iD 112 (349)
|+||||||+|+||.+++++|+++|++|++++|+.++ ++....+...... .+.++.+|.... . ++|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 789999999999999999999999999999998764 2222221111112 567778883221 1 579
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEecccccc----------CCCCch
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNASVENWL----------PLPRMS 180 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~isS~~~~~----------~~~~~~ 180 (349)
+||||||..... . ..++++..+++|+.|+.++++++.+...+ ++++||++||.+.+. +.....
T Consensus 109 ~Vih~A~~~~~~----~-~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~ 183 (381)
T 1n7h_A 109 EVYNLAAQSHVA----V-SFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRS 183 (381)
T ss_dssp EEEECCSCCCHH----H-HHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCS
T ss_pred EEEECCcccCcc----c-cccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCC
Confidence 999999975432 1 13567899999999999999999988654 246999999987653 234467
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC----eeEEEEecCcccCCCCC---Ccccc-ccchhhh-hHHHHhhhcCCCCHHHHHH
Q 039397 181 LYASAKAALVTFYESLRFELNDE----VGITIATHGWIGIEMTK---GKFML-EDGAEMQ-WKEEREVHVAGGPVEDFAR 251 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~----I~v~~v~PG~v~T~~~~---~~~~~-~~~~~~~-~~~~~~~~~~~~~~edvA~ 251 (349)
.|+.+|++.+.+++.++.+++-. ..++.+.||...+.... ..... ..+.... ...........+.++|+|+
T Consensus 184 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~ 263 (381)
T 1n7h_A 184 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 263 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHH
Confidence 89999999999999999887632 11223334432211000 00000 0000000 0000012234678999999
Q ss_pred HHHHHHhcCC
Q 039397 252 LIVSGACRGD 261 (349)
Q Consensus 252 ~i~~l~~~~~ 261 (349)
+++.+++++.
T Consensus 264 a~~~~~~~~~ 273 (381)
T 1n7h_A 264 AMWLMLQQEK 273 (381)
T ss_dssp HHHHHHTSSS
T ss_pred HHHHHHhCCC
Confidence 9999998754
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-19 Score=166.24 Aligned_cols=185 Identities=14% Similarity=0.028 Sum_probs=108.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------cC-C-Ccceeeec
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------ES-K-AVDHLVNT 117 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~-g-~iDvlVnn 117 (349)
+|+|+||||+|+||++++++|+++|++|++++|+.+.. . .+.+|.. .. + ++|++|||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~--~~~~Dl~d~~~~~~~~~~~~~d~vih~ 67 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP------------K--FEQVNLLDSNAVHHIIHDFQPHVIVHC 67 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHHCCSEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC------------C--eEEecCCCHHHHHHHHHhhCCCEEEEC
Confidence 57999999999999999999999999999999875430 0 2223311 11 1 58999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC----------CCCchhhHHHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP----------LPRMSLYASAKA 187 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~----------~~~~~~Y~asKa 187 (349)
||...... ..+++++.+++|+.++.++++++.+. ++++|++||.+.+.+ ......|+.+|+
T Consensus 68 A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~ 138 (315)
T 2ydy_A 68 AAERRPDV-----VENQPDAASQLNVDASGNLAKEAAAV----GAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKL 138 (315)
T ss_dssp C------------------------CHHHHHHHHHHHHH----TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHH
T ss_pred CcccChhh-----hhcCHHHHHHHHHHHHHHHHHHHHHc----CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 99754321 23567889999999999999999763 359999999887654 344678999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccC---CCCCCccccc--cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGI---EMTKGKFMLE--DGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
+.+.+++.++.++ . +|++.|. |+.++ .+........ .+..... ........+.++|+|+++++++++
T Consensus 139 ~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~~~~~ 211 (315)
T 2ydy_A 139 DGEKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANM--DHWQQRFPTHVKDVATVCRQLAEK 211 (315)
T ss_dssp HHHHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEE--ECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeee--ccCceECcEEHHHHHHHHHHHHHh
Confidence 9999999875322 2 5555555 55554 2211110000 0000000 011234667899999999999875
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=161.43 Aligned_cols=197 Identities=12% Similarity=0.018 Sum_probs=139.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc--------CCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE--------SKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~--------~g~iDvlVnnA 118 (349)
++|+||||+|+||++++++|+++ |++|++++|+.++.+... ....+..+.+|... ..++|++||||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A 75 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV 75 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence 47999999999999999999998 899999999887654322 12356777777432 12589999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC------------------Cch
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP------------------RMS 180 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~------------------~~~ 180 (349)
|....... .++++..+++|+.++.++++++.+. ++++|++||.+.+...+ ...
T Consensus 76 ~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~ 146 (345)
T 2bll_A 76 AIATPIEY-----TRNPLRVFELDFEENLRIIRYCVKY----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRW 146 (345)
T ss_dssp CCCCHHHH-----HHSHHHHHHHHTHHHHHHHHHHHHT----TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGG
T ss_pred cccCccch-----hcCHHHHHHHHHHHHHHHHHHHHHh----CCeEEEEecHHHcCCCCCCCcCCcccccccCcccCccc
Confidence 97543211 1346789999999999999988653 37999999976653221 123
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccc---cccchhhhh----HHH--------HhhhcCCCC
Q 039397 181 LYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFM---LEDGAEMQW----KEE--------REVHVAGGP 245 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~---~~~~~~~~~----~~~--------~~~~~~~~~ 245 (349)
.|+.+|++.+.+++.++.+.+ ++++++.||.+.++....... ........+ ... .......+.
T Consensus 147 ~Y~~sK~~~e~~~~~~~~~~~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 224 (345)
T 2bll_A 147 IYSVSKQLLDRVIWAYGEKEG--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 224 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC--CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEE
T ss_pred ccHHHHHHHHHHHHHHHHhcC--CCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEE
Confidence 799999999999999987764 799999999998775432100 000000000 000 011124678
Q ss_pred HHHHHHHHHHHHhcC
Q 039397 246 VEDFARLIVSGACRG 260 (349)
Q Consensus 246 ~edvA~~i~~l~~~~ 260 (349)
++|+|++++.++++.
T Consensus 225 v~Dva~a~~~~~~~~ 239 (345)
T 2bll_A 225 IRDGIEALYRIIENA 239 (345)
T ss_dssp HHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999999864
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.2e-19 Score=165.44 Aligned_cols=274 Identities=13% Similarity=-0.010 Sum_probs=164.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch----hhhHHHHhcCCCCeEEEEEeccccCCCcceeeec
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR----LQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNT 117 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~----l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnn 117 (349)
+.++.+|+||||||+|+||++++++|+++|++|++++|+... .+... ... ....+..+.+|.. ++|++||+
T Consensus 2 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~---~~d~vi~~ 76 (321)
T 3vps_A 2 QRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTG-KFL-EKPVLELEERDLS---DVRLVYHL 76 (321)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSS-EEE-CSCGGGCCHHHHT---TEEEEEEC
T ss_pred CcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhh-hhc-cCCCeeEEeCccc---cCCEEEEC
Confidence 345668999999999999999999999999999999998762 11111 110 1123344455544 79999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAK 186 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asK 186 (349)
||........+. ....++ |+.++.++++++... +.+++|++||...+... .....|+.+|
T Consensus 77 a~~~~~~~~~~~-----~~~~~~-n~~~~~~ll~a~~~~---~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK 147 (321)
T 3vps_A 77 ASHKSVPRSFKQ-----PLDYLD-NVDSGRHLLALCTSV---GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASK 147 (321)
T ss_dssp CCCCCHHHHTTS-----TTTTHH-HHHHHHHHHHHHHHH---TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred CccCChHHHHhC-----HHHHHH-HHHHHHHHHHHHHHc---CCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHH
Confidence 998654322222 234556 999999999988654 23699999998765432 2257899999
Q ss_pred HHHHHHHHHHHHHhcCCe-eEEEEecCcccCCCCCCccccccchhhhhHHHH---------hhhcCCCCHHHHHHHHHHH
Q 039397 187 AALVTFYESLRFELNDEV-GITIATHGWIGIEMTKGKFMLEDGAEMQWKEER---------EVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 187 aal~~l~~~la~el~~~I-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~edvA~~i~~l 256 (349)
.+.+.+++.++.+.+ + +++++.|+.+..+....... -.......... ......+.++|+|++++.+
T Consensus 148 ~~~E~~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~ 223 (321)
T 3vps_A 148 VGLEMVAGAHQRASV--APEVGIVRFFNVYGPGERPDAL--VPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223 (321)
T ss_dssp HHHHHHHHHHHHSSS--SCEEEEEEECEEECTTCCTTSH--HHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcC--CCceEEEEeccccCcCCCCCCh--HHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHH
Confidence 999999999987643 7 99999999988765432100 00000000000 0112356789999999999
Q ss_pred HhcCCce-EEc--CchHHHHHHHHHhchHHHHHHHHHhccccCCC--ccccCCCCCCcccCCCCCC--CccC--CCCcee
Q 039397 257 ACRGDTY-VKF--PSWYDVFLLYRVFAPHVLNWTFRLLISSEGAR--RTSLIGTGRPLLEGPPARP--RLEG--TSPRQV 327 (349)
Q Consensus 257 ~~~~~~~-i~~--p~~~~~~~~~~~~~P~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~--~s~~~~ 327 (349)
++++... +++ +..... .++.+.+. .+....... ............|..+.+. ++.| .++++.
T Consensus 224 ~~~~~~g~~~i~~~~~~s~--------~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~ 294 (321)
T 3vps_A 224 ANRPLPSVVNFGSGQSLSV--------NDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEG 294 (321)
T ss_dssp GGSCCCSEEEESCSCCEEH--------HHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHH
T ss_pred HhcCCCCeEEecCCCcccH--------HHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHH
Confidence 9987543 222 221111 12222222 111110000 0000011123334333332 2556 689999
Q ss_pred ccCcccccccCCCCC
Q 039397 328 LSSPSSFFSQYSPSS 342 (349)
Q Consensus 328 ~~~~~~~~~~~~~~~ 342 (349)
+.+..+++++.+...
T Consensus 295 l~~~~~~~~~~~~~~ 309 (321)
T 3vps_A 295 IRLTLEWWQSRDLDD 309 (321)
T ss_dssp HHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHhCCCch
Confidence 999888888876544
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=164.13 Aligned_cols=200 Identities=14% Similarity=0.106 Sum_probs=142.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-c-------CCCccee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-E-------SKAVDHL 114 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-~-------~g~iDvl 114 (349)
.|++|+||||||+|+||.+++++|+++ |++|++++|+.++...... ...+.++.+|.. . ..++|++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~~~d~V 95 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVKKCDVI 95 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhccCCEE
Confidence 467789999999999999999999999 9999999999877654432 235777888754 2 2368999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------------------
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------------ 176 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------------ 176 (349)
||+||....... .++.++.+++|+.++.++++++... + +++|++||.+.+...
T Consensus 96 ih~A~~~~~~~~-----~~~~~~~~~~nv~~~~~ll~a~~~~---~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~ 166 (372)
T 3slg_A 96 LPLVAIATPATY-----VKQPLRVFELDFEANLPIVRSAVKY---G-KHLVFPSTSEVYGMCADEQFDPDASALTYGPIN 166 (372)
T ss_dssp EECBCCCCHHHH-----HHCHHHHHHHHTTTTHHHHHHHHHH---T-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTT
T ss_pred EEcCccccHHHH-----hhCHHHHHHHHHHHHHHHHHHHHHh---C-CcEEEeCcHHHhCCCCCCCCCccccccccCCCC
Confidence 999998643321 1345688999999999999988653 2 799999997654321
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccc--hhh-hhH------------HHHhhhc
Q 039397 177 PRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDG--AEM-QWK------------EEREVHV 241 (349)
Q Consensus 177 ~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~--~~~-~~~------------~~~~~~~ 241 (349)
.....|+.+|.+.+.+++.++.+ .++++++.|+.+..+........... ... .+. .......
T Consensus 167 ~p~~~Y~~sK~~~E~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 243 (372)
T 3slg_A 167 KPRWIYACSKQLMDRVIWGYGME---GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKR 243 (372)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHTT---TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEE
T ss_pred CCCCcHHHHHHHHHHHHHHHHHC---CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEE
Confidence 23347999999999999999876 38999999999877754321110000 000 000 0011122
Q ss_pred CCCCHHHHHHHHHHHHhcC
Q 039397 242 AGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 242 ~~~~~edvA~~i~~l~~~~ 260 (349)
..+.++|+|++++.++++.
T Consensus 244 ~~i~v~Dva~a~~~~~~~~ 262 (372)
T 3slg_A 244 AFTYVDDGISALMKIIENS 262 (372)
T ss_dssp ECEEHHHHHHHHHHHHHCG
T ss_pred EEEEHHHHHHHHHHHHhcc
Confidence 4678899999999999875
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=163.02 Aligned_cols=163 Identities=17% Similarity=0.176 Sum_probs=122.9
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHc---CCeEEEEecCcchhhhHH---HHhcC------------CCCeEEEEE
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKR---KANLVLVARRENRLQGST---IDEYN------------PINEVTLVS 102 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~---G~~Vv~~~r~~~~l~~~~---~~~~~------------~~~~~~~~~ 102 (349)
.....++|+|+||||+|+||.+++++|+++ |++|++++|+++...... ..+.. ....+.++.
T Consensus 67 ~~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~ 146 (478)
T 4dqv_A 67 PGPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA 146 (478)
T ss_dssp CCCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred CCCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence 344568899999999999999999999999 999999999876543221 11111 124688888
Q ss_pred ecccc-------------CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 103 LNNKE-------------SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 103 ~d~~~-------------~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
+|..+ ..++|++|||||.... +.++..+++|+.|+.++++++... +.+++|++||
T Consensus 147 ~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~~---~~~~~V~iSS 214 (478)
T 4dqv_A 147 GDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALTT---KLKPFTYVST 214 (478)
T ss_dssp CCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTSS---SCCCEEEEEE
T ss_pred eECCCcccCCCHHHHHHHHcCCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEee
Confidence 88542 2368999999998643 223467889999999999998753 2358999999
Q ss_pred cccccCCCC----------------------chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCC
Q 039397 170 VENWLPLPR----------------------MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE 217 (349)
Q Consensus 170 ~~~~~~~~~----------------------~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~ 217 (349)
.+.+..... ...|+.||.+.+.+++.++.+.+ ++++++.||.|-.+
T Consensus 215 ~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g--i~~~ivRpg~v~G~ 282 (478)
T 4dqv_A 215 ADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCA--LPVAVFRCGMILAD 282 (478)
T ss_dssp GGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHC--CCEEEEEECEEECC
T ss_pred hhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhC--CCeEEEECceeeCC
Confidence 765432111 13499999999999999987664 79999999999765
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=154.88 Aligned_cols=155 Identities=10% Similarity=0.086 Sum_probs=119.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-------C--CCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-------S--KAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-------~--g~iDvlVnnA 118 (349)
|+|+||||+|+||++++++|+++|++|++++|+.....+ .+. ..+..+.+|... . +++|++||+|
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~---~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a 75 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---AIT---EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA 75 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSC---TTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---hcC---CCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence 589999999999999999999999999999997654321 111 145667777211 1 2799999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------CCCchhhHHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------LPRMSLYASAKA 187 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKa 187 (349)
|...... ..++++..+++|+.++.++++++... +.+++|++||.+.+.. ......|+.+|+
T Consensus 76 ~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~ 147 (330)
T 2c20_A 76 ADSLVGV-----SMEKPLQYYNNNVYGALCLLEVMDEF---KVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKL 147 (330)
T ss_dssp CCCCHHH-----HHHSHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHH
T ss_pred cccCccc-----cccCHHHHHHHHhHHHHHHHHHHHHc---CCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHH
Confidence 9754321 12457889999999999999987542 3379999999776532 123578999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCC
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEM 218 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~ 218 (349)
+.+.+++.++.+++ ++++++.||.+..+.
T Consensus 148 ~~e~~~~~~~~~~~--~~~~ilrp~~v~G~~ 176 (330)
T 2c20_A 148 AIEKMLHWYSQASN--LRYKIFRYFNVAGAT 176 (330)
T ss_dssp HHHHHHHHHHHTSS--CEEEEEECSEEECCC
T ss_pred HHHHHHHHHHHHhC--CcEEEEecCcccCCC
Confidence 99999999987753 899999999887764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=154.29 Aligned_cols=158 Identities=14% Similarity=0.053 Sum_probs=112.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-CCCeEEEEEecccc-------C--CCcceeeecC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-PINEVTLVSLNNKE-------S--KAVDHLVNTA 118 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d~~~-------~--g~iDvlVnnA 118 (349)
+||||||+|+||++++++|+++|++|++++|......+....+.. .+..+..+.+|... . .++|++||||
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A 81 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEECC
Confidence 699999999999999999999999999998754322222221110 12345667777221 1 2699999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------C-CCchhhHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------L-PRMSLYASAK 186 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~-~~~~~Y~asK 186 (349)
|....... .++.++.+++|+.|+.++++++.. .+.++||++||.+.+.. . |....|++||
T Consensus 82 ~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK 153 (338)
T 1udb_A 82 GLKAVGES-----VQKPLEYYDNNVNGTLRLISAMRA---ANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSK 153 (338)
T ss_dssp SCCCHHHH-----HHCHHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHH
T ss_pred ccCccccc-----hhcHHHHHHHHHHHHHHHHHHHHh---cCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHH
Confidence 97533211 234578899999999999987643 23479999999875421 1 2367899999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCccc
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIG 215 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~ 215 (349)
++++.+++.++.+.. .++++.+.|+.+-
T Consensus 154 ~~~e~~~~~~~~~~~-~~~~~ilR~~~v~ 181 (338)
T 1udb_A 154 LMVEQILTDLQKAQP-DWSIALLRYFNPV 181 (338)
T ss_dssp HHHHHHHHHHHHHST-TCEEEEEEECEEE
T ss_pred HHHHHHHHHHHHhcC-CCceEEEeeceec
Confidence 999999999998852 2677777775443
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.8e-18 Score=154.88 Aligned_cols=188 Identities=10% Similarity=-0.026 Sum_probs=133.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc------ccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN------KESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~------~~~g~iDvlVnnAg~~ 121 (349)
|+|+||||+|+||++++++|+++|++|++++|+....+ .. .+..+.+|. +...++|++||+||..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--------~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~ 73 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--------DYEYRVSDYTLEDLINQLNDVDAVVHLAATR 73 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCCHHHHHHHTTTCSEEEECCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--------ceEEEEccccHHHHHHhhcCCCEEEEccccC
Confidence 68999999999999999999999999999999843322 11 455666663 2345899999999986
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHHHHHH
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAKAALV 190 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaal~ 190 (349)
... +.+..+++|+.++.++++++... +.+++|++||...+... .....|+.+|.+.+
T Consensus 74 ~~~---------~~~~~~~~n~~~~~~ll~a~~~~---~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E 141 (311)
T 3m2p_A 74 GSQ---------GKISEFHDNEILTQNLYDACYEN---NISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACE 141 (311)
T ss_dssp CSS---------SCGGGTHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHH
T ss_pred CCC---------ChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHH
Confidence 433 23467789999999999998643 23689999997665321 13468999999999
Q ss_pred HHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHH---------HHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 191 TFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKE---------EREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 191 ~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.+++.++.+.+ ++++.+.||.+..+....... -........ ........+.++|+|++++.+++++
T Consensus 142 ~~~~~~~~~~g--~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~ 216 (311)
T 3m2p_A 142 HIGNIYSRKKG--LCIKNLRFAHLYGFNEKNNYM--INRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE 216 (311)
T ss_dssp HHHHHHHHHSC--CEEEEEEECEEECSCC--CCH--HHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHcC--CCEEEEeeCceeCcCCCCCCH--HHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence 99999987643 899999999987765432100 000000000 0011124567899999999999887
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.7e-18 Score=153.98 Aligned_cols=196 Identities=13% Similarity=0.020 Sum_probs=135.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------cCC--Ccceee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKR--KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------ESK--AVDHLV 115 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~g--~iDvlV 115 (349)
+|+++||||+|+||.+++++|+++ |++|++++|+..+.+ ... .+..+.+|.. ... ++|++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~-------~~~~~~~D~~d~~~~~~~~~~~~~d~vi 73 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVN-------SGPFEVVNALDFNQIEHLVEVHKITDIY 73 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHH-------SSCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccC-------CCceEEecCCCHHHHHHHHhhcCCCEEE
Confidence 468999999999999999999999 999999999876532 111 2345566621 122 789999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------------CCchhhH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------PRMSLYA 183 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------~~~~~Y~ 183 (349)
|+||..... ..++++..+++|+.++.++++++.+. +.+++|++||.+.+.+. .....|+
T Consensus 74 h~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~ 144 (312)
T 2yy7_A 74 LMAALLSAT------AEKNPAFAWDLNMNSLFHVLNLAKAK---KIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYG 144 (312)
T ss_dssp ECCCCCHHH------HHHCHHHHHHHHHHHHHHHHHHHHTT---SCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHH
T ss_pred ECCccCCCc------hhhChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhH
Confidence 999975321 11456789999999999999998753 33699999998765432 2256899
Q ss_pred HHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHH---HH--------hhhcCCCCHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKE---ER--------EVHVAGGPVEDFARL 252 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~---~~--------~~~~~~~~~edvA~~ 252 (349)
.+|.+.+.+++.++.+.+ ++++++.||.+-.+...............+.. .. ......+.++|+|++
T Consensus 145 ~sK~~~e~~~~~~~~~~~--~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 222 (312)
T 2yy7_A 145 ISKQAGERWCEYYHNIYG--VDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDA 222 (312)
T ss_dssp HHHHHHHHHHHHHHHHHC--CEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC--CcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHH
Confidence 999999999999987764 79999999988765321100000000000000 00 011234567999999
Q ss_pred HHHHHhcCC
Q 039397 253 IVSGACRGD 261 (349)
Q Consensus 253 i~~l~~~~~ 261 (349)
++.+++++.
T Consensus 223 ~~~~~~~~~ 231 (312)
T 2yy7_A 223 TINIMKAPV 231 (312)
T ss_dssp HHHHHHSCG
T ss_pred HHHHHhCcc
Confidence 999998653
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=152.52 Aligned_cols=193 Identities=13% Similarity=0.036 Sum_probs=130.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cc-cC----CCcceee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NK-ES----KAVDHLV 115 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~-~~----g~iDvlV 115 (349)
+++||||+|+||++++++|+++| ++|++++|+...... ..+.... +.+| .+ .. +++|++|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~~~~~-----~~~d~~~~~~~~~~~~~~~~~~~d~vi 73 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNLVDLN-----IADYMDKEDFLIQIMAGEEFGDVEAIF 73 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG--HHHHTSC-----CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh--hhcCcce-----eccccccHHHHHHHHhccccCCCcEEE
Confidence 48999999999999999999999 999999998654321 1111110 2222 11 11 2699999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC-----------CchhhHH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP-----------RMSLYAS 184 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~-----------~~~~Y~a 184 (349)
||||.... ..++++..+++|+.++.++++++.+. +. ++|++||.+.+...+ ....|+.
T Consensus 74 ~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~---~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~ 142 (310)
T 1eq2_A 74 HEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER---EI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGY 142 (310)
T ss_dssp ECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH---TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHH
T ss_pred ECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc---CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHH
Confidence 99997543 12456889999999999999998754 33 899999987653322 2568999
Q ss_pred HHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc-----------chhhhhHHHHhh-hcCCCCHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED-----------GAEMQWKEEREV-HVAGGPVEDFARL 252 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~edvA~~ 252 (349)
+|.+.+.+++.++.+.+ ++++++.||.+.++.......... +........... ....+.++|+|++
T Consensus 143 sK~~~e~~~~~~~~~~g--~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~ 220 (310)
T 1eq2_A 143 SKFLFDEYVRQILPEAN--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV 220 (310)
T ss_dssp HHHHHHHHHHHHGGGCS--SCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC--CCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHH
Confidence 99999999999886542 899999999998775431000000 000000001111 3345778999999
Q ss_pred HHHHHhcCC
Q 039397 253 IVSGACRGD 261 (349)
Q Consensus 253 i~~l~~~~~ 261 (349)
++.+++++.
T Consensus 221 ~~~~~~~~~ 229 (310)
T 1eq2_A 221 NLWFLENGV 229 (310)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHhcCC
Confidence 999998753
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.7e-17 Score=165.98 Aligned_cols=169 Identities=17% Similarity=0.105 Sum_probs=118.4
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEecccc-------CC--C
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLNNKE-------SK--A 110 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d~~~-------~g--~ 110 (349)
|.+++++|+||||||+|+||++++++|+++|++|++++|+.....+...++. .....+..+.+|... .. +
T Consensus 5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~ 84 (699)
T 1z45_A 5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYK 84 (699)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSC
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCC
Confidence 4567789999999999999999999999999999999997654332222221 012345667777221 12 7
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC---------------
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP--------------- 175 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~--------------- 175 (349)
+|++|||||........ +..++.+++|+.++.++++++... +.++||++||.+.+..
T Consensus 85 ~D~Vih~A~~~~~~~~~-----~~~~~~~~~Nv~gt~~ll~a~~~~---~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~ 156 (699)
T 1z45_A 85 IDSVIHFAGLKAVGEST-----QIPLRYYHNNILGTVVLLELMQQY---NVSKFVFSSSATVYGDATRFPNMIPIPEECP 156 (699)
T ss_dssp CCEEEECCSCCCHHHHH-----HSHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred CCEEEECCcccCcCccc-----cCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEECcHHHhCCCccccccCCccccCC
Confidence 99999999976432211 233578999999999998877532 3479999999875421
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCC
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE 217 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~ 217 (349)
......|+.||++++.+++.++.+....++++++.|+.+-.+
T Consensus 157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~ 198 (699)
T 1z45_A 157 LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGA 198 (699)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCC
Confidence 113468999999999999999887533388899998776544
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=168.82 Aligned_cols=200 Identities=11% Similarity=0.007 Sum_probs=141.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc--------CCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE--------SKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~--------~g~iDvlV 115 (349)
+++|+|+||||+|+||.+++++|+++ |++|++++|+.++.+... ....+..+.+|... ..++|++|
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vi 387 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVKKCDVVL 387 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhcCCCEEE
Confidence 46789999999999999999999998 899999999877654321 12356777777432 23589999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------------------C
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------------P 177 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------------~ 177 (349)
||||....... .++++..+++|+.|+.++++++.+. ++++|++||.+.+... .
T Consensus 388 h~Aa~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~aa~~~----~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~ 458 (660)
T 1z7e_A 388 PLVAIATPIEY-----TRNPLRVFELDFEENLRIIRYCVKY----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK 458 (660)
T ss_dssp ECCCCCCTHHH-----HHSHHHHHHHHTHHHHHHHHHHHHT----TCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTC
T ss_pred ECceecCcccc-----ccCHHHHHHhhhHHHHHHHHHHHHh----CCEEEEEecHHHcCCCCCcccCCCccccccCcccC
Confidence 99997643211 1346789999999999999998753 2799999998765321 1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcc----cccc--chhhh-hHHH--------HhhhcC
Q 039397 178 RMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKF----MLED--GAEMQ-WKEE--------REVHVA 242 (349)
Q Consensus 178 ~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~----~~~~--~~~~~-~~~~--------~~~~~~ 242 (349)
....|+.||.+.+.+++.++.+.+ ++++++.||.+.++...... .... ..... .... ......
T Consensus 459 p~~~Y~~sK~~~E~~~~~~~~~~g--i~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~ 536 (660)
T 1z7e_A 459 PRWIYSVSKQLLDRVIWAYGEKEG--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC 536 (660)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEE
T ss_pred CCCCcHHHHHHHHHHHHHHHHHcC--CCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEE
Confidence 223799999999999999987764 79999999999887643200 0000 00000 0000 011124
Q ss_pred CCCHHHHHHHHHHHHhcC
Q 039397 243 GGPVEDFARLIVSGACRG 260 (349)
Q Consensus 243 ~~~~edvA~~i~~l~~~~ 260 (349)
.++++|+|++++.+++++
T Consensus 537 ~i~v~Dva~ai~~~l~~~ 554 (660)
T 1z7e_A 537 FTDIRDGIEALYRIIENA 554 (660)
T ss_dssp CEEHHHHHHHHHHHHHCG
T ss_pred EEEHHHHHHHHHHHHhCc
Confidence 677999999999999864
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.5e-18 Score=152.65 Aligned_cols=179 Identities=12% Similarity=0.003 Sum_probs=121.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-------CC--CcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-------SK--AVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-------~g--~iDvlVnnAg 119 (349)
+++||||+|+||++++++|+ +|++|++++|+.+. + . . +.+|... .. ++|++|||||
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~--~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~ 66 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------G--G---YKLDLTDFPRLEDFIIKKRPDVIINAAA 66 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------T--C---EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------C--C---ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence 59999999999999999999 59999999998742 1 0 1 4555211 11 5899999999
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC----------CchhhHHHHHHH
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP----------RMSLYASAKAAL 189 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~----------~~~~Y~asKaal 189 (349)
..... . ..+++++.+++|+.++.++++++.+ .+++||++||..++.+.+ ....|+++|+++
T Consensus 67 ~~~~~----~-~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~ 137 (273)
T 2ggs_A 67 MTDVD----K-CEIEKEKAYKINAEAVRHIVRAGKV----IDSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLG 137 (273)
T ss_dssp CCCHH----H-HHHCHHHHHHHHTHHHHHHHHHHHH----TTCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHH
T ss_pred ccChh----h-hhhCHHHHHHHhHHHHHHHHHHHHH----hCCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 75432 1 1256789999999999999999964 346999999998775443 257899999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCcccc-ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFML-EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
+.+++. +... +|++.+. | ++++....... ..+..... ... ....++++|+|++++++++++.
T Consensus 138 e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~dva~~i~~~~~~~~ 201 (273)
T 2ggs_A 138 ETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVFA--FKG-YYSPISARKLASAILELLELRK 201 (273)
T ss_dssp HHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEEE--ESC-EECCCBHHHHHHHHHHHHHHTC
T ss_pred HHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCCEEe--ecC-CCCceEHHHHHHHHHHHHhcCc
Confidence 999987 2222 5555544 3 22221100000 00000000 000 3467899999999999998764
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.6e-17 Score=148.01 Aligned_cols=193 Identities=13% Similarity=0.009 Sum_probs=129.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCC--CcceeeecCcCCCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESK--AVDHLVNTASLGHT 123 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g--~iDvlVnnAg~~~~ 123 (349)
++++++||||+|+||++++++|+++|++|++++|+.+. ++.+. ....+... ++|++||+||....
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~------D~~d~-------~~~~~~~~~~~~d~vih~a~~~~~ 68 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL------NLLDS-------RAVHDFFASERIDQVYLAAAKVGG 68 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTC------CTTCH-------HHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccC------CccCH-------HHHHHHHHhcCCCEEEEcCeecCC
Confidence 45789999999999999999999999999998886320 11000 00001112 68999999997532
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC----------------CCCchhhHHHHH
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP----------------LPRMSLYASAKA 187 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~----------------~~~~~~Y~asKa 187 (349)
... ..++.+..+++|+.++.++++++... +.+++|++||...+.. .|....|+.+|.
T Consensus 69 ~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 141 (321)
T 1e6u_A 69 IVA----NNTYPADFIYQNMMIESNIIHAAHQN---DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKI 141 (321)
T ss_dssp HHH----HHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHH
T ss_pred cch----hhhCHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHH
Confidence 111 12345788999999999999998653 2369999999876532 122358999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccccc--chhhhhHHH--------------HhhhcCCCCHHHHHH
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLED--GAEMQWKEE--------------REVHVAGGPVEDFAR 251 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~edvA~ 251 (349)
+.+.+++.++.+.+ ++++++.||.+..+.......... ......... .......+.++|+|+
T Consensus 142 ~~E~~~~~~~~~~~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~ 219 (321)
T 1e6u_A 142 AGIKLCESYNRQYG--RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA 219 (321)
T ss_dssp HHHHHHHHHHHHHC--CEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHH
T ss_pred HHHHHHHHHHHHhC--CCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHH
Confidence 99999999987764 799999999988765431100000 000000000 001123457899999
Q ss_pred HHHHHHhcC
Q 039397 252 LIVSGACRG 260 (349)
Q Consensus 252 ~i~~l~~~~ 260 (349)
+++.++.++
T Consensus 220 ~~~~~~~~~ 228 (321)
T 1e6u_A 220 ASIHVMELA 228 (321)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHHhCc
Confidence 999999865
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-18 Score=157.13 Aligned_cols=181 Identities=14% Similarity=0.111 Sum_probs=124.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCC--CcceeeecCcCCCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESK--AVDHLVNTASLGHT 123 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g--~iDvlVnnAg~~~~ 123 (349)
.-++||||||+|+||++++++|+++|++|++++|+...+.... .+ .+... ++|++|||||....
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~-~~-------------~~~~~~~~~d~vih~A~~~~~ 76 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVL-AV-------------NKFFNEKKPNVVINCAAHTAV 76 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHH-HH-------------HHHHHHHCCSEEEECCCCCCH
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHH-HH-------------HHHHHhcCCCEEEECCccCCH
Confidence 3479999999999999999999999999999999743222110 00 00011 68999999997532
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC-----------CchhhHHHHHHHHHH
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP-----------RMSLYASAKAALVTF 192 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~-----------~~~~Y~asKaal~~l 192 (349)
. . ..+++++.+++|+.|+.++++++.+. +.++|++||.+.+.+.+ ....|+.+|++.+.+
T Consensus 77 ~----~-~~~~~~~~~~~nv~~~~~l~~a~~~~----~~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 147 (292)
T 1vl0_A 77 D----K-CEEQYDLAYKINAIGPKNLAAAAYSV----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENF 147 (292)
T ss_dssp H----H-HHHCHHHHHHHHTHHHHHHHHHHHHH----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred H----H-HhcCHHHHHHHHHHHHHHHHHHHHHc----CCeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence 1 1 12567899999999999999998763 34999999987654332 356899999999999
Q ss_pred HHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHH-------hhhcCCCCHHHHHHHHHHHHhcC
Q 039397 193 YESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEER-------EVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 193 ~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++.++. .++.+.|+.+..+ ...... . ........ ......+.++|+|++++++++++
T Consensus 148 ~~~~~~------~~~~lR~~~v~G~-~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 211 (292)
T 1vl0_A 148 VKALNP------KYYIVRTAWLYGD-GNNFVK---T-MINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK 211 (292)
T ss_dssp HHHHCS------SEEEEEECSEESS-SSCHHH---H-HHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred HHhhCC------CeEEEeeeeeeCC-CcChHH---H-HHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC
Confidence 988752 3566777776654 211100 0 00000000 11245677999999999999875
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=9.1e-17 Score=147.91 Aligned_cols=189 Identities=13% Similarity=0.084 Sum_probs=128.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------cC--CCcceeeec
Q 039397 49 VVIITGASSDIGEQIAYEYAKR--KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------ES--KAVDHLVNT 117 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~--g~iDvlVnn 117 (349)
+||||||+|+||++++++|+++ |++|++++|+.+..+ .+..+.+|.. .. .++|++|||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~ 69 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKYSIDAIFHL 69 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhcCCcEEEEC
Confidence 4899999999999999999999 899999999865432 1334556621 11 279999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC------------CchhhHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP------------RMSLYASA 185 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~------------~~~~Y~as 185 (349)
||..... ..++++..+++|+.|+.++++++.+. +.+++|++||.+.+.+.. ....|+.|
T Consensus 70 a~~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~s 140 (317)
T 3ajr_A 70 AGILSAK------GEKDPALAYKVNMNGTYNILEAAKQH---RVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVT 140 (317)
T ss_dssp CCCCHHH------HHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHH
T ss_pred CcccCCc------cccChHHHhhhhhHHHHHHHHHHHHc---CCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHH
Confidence 9975321 12456789999999999999988653 336999999988764321 35789999
Q ss_pred HHHHHHHHHHHHHHhcCCeeEEEEecCcc-cCCCCCCccccccchhhhhHHH-----------HhhhcCCCCHHHHHHHH
Q 039397 186 KAALVTFYESLRFELNDEVGITIATHGWI-GIEMTKGKFMLEDGAEMQWKEE-----------REVHVAGGPVEDFARLI 253 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~I~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~edvA~~i 253 (349)
|++.+.+++.++.+.+ ++++++.|+.+ .+........ .+.....+... .......+.++|+|+++
T Consensus 141 K~~~e~~~~~~~~~~~--~~~~~lR~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 217 (317)
T 3ajr_A 141 KIAAELLGQYYYEKFG--LDVRSLRYPGIISYKAEPTAGT-TDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKAL 217 (317)
T ss_dssp HHHHHHHHHHHHHHHC--CEEEEEEECEEECSSSCCCSCS-STHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC--CeEEEEecCcEeccCCCCCCcc-hhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHH
Confidence 9999999999887654 78899875444 3322111000 00000000000 00112345679999999
Q ss_pred HHHHhcC
Q 039397 254 VSGACRG 260 (349)
Q Consensus 254 ~~l~~~~ 260 (349)
+.++..+
T Consensus 218 ~~~l~~~ 224 (317)
T 3ajr_A 218 VDLYEAD 224 (317)
T ss_dssp HHHHHCC
T ss_pred HHHHhCC
Confidence 9999765
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.8e-16 Score=154.48 Aligned_cols=199 Identities=13% Similarity=0.033 Sum_probs=137.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhh---hHHHHh---------cCCCCeEEEEEecccc------C
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---GSTIDE---------YNPINEVTLVSLNNKE------S 108 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~---~~~~~~---------~~~~~~~~~~~~d~~~------~ 108 (349)
.|+||||||+|+||.+++++|.++|++|++++|+..... .+...+ ......+.++.+|..+ .
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~ 229 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVLP 229 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCCCS
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCCCc
Confidence 479999999999999999999999999999999987322 221111 0113468888888544 4
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc--cc------------
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN--WL------------ 174 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~--~~------------ 174 (349)
.++|++|||||.... .+.++..+++|+.|+.++++++.+ +.+++|++||.+. ..
T Consensus 230 ~~~D~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~~v~iSS~~vG~~~~~~~~~~~~~E~ 297 (508)
T 4f6l_B 230 ENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ----HHARLIYVSTISVGTYFDIDTEDVTFSEA 297 (508)
T ss_dssp SCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT----TTCEEEEEEESCTTSEECTTCSCCEECTT
T ss_pred cCCCEEEECCceecC--------CCCHHHHhhhHHHHHHHHHHHHHh----CCCcEEEeCChhhccCCccCCcCcccccc
Confidence 689999999997531 134567889999999999999876 3478999999877 10
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccch--hhhhHHH-----------H
Q 039397 175 ----PLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGA--EMQWKEE-----------R 237 (349)
Q Consensus 175 ----~~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~-----------~ 237 (349)
+......|+.+|.+.+.+++.++. ..++++++.||.+-.+.....+...... ....... .
T Consensus 298 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g 374 (508)
T 4f6l_B 298 DVYKGQLLTSPYTRSKFYSELKVLEAVN---NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMA 374 (508)
T ss_dssp CSCSSBCCCSHHHHHHHHHHHHHHHHHH---TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGG
T ss_pred cccccccCCCcHHHHHHHHHHHHHHHHH---cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCcc
Confidence 012457899999999999998753 2389999999999777544321111000 0000000 0
Q ss_pred hhhcCCCCHHHHHHHHHHHHhcC
Q 039397 238 EVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 238 ~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.....+++++|+|++++.++.++
T Consensus 375 ~~~~~~v~v~DvA~ai~~~~~~~ 397 (508)
T 4f6l_B 375 EMPVDFSFVDTTARQIVALAQVN 397 (508)
T ss_dssp GSEEECEEHHHHHHHHHHHTTBC
T ss_pred CceEEEEcHHHHHHHHHHHHhCC
Confidence 12234677899999999999876
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.3e-17 Score=149.94 Aligned_cols=180 Identities=11% Similarity=-0.058 Sum_probs=123.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------c-CCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------E-SKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~-~g~iDvlVnn 117 (349)
++++|+||| +|+||++++++|+++|++|++++|+.+++. ..+.++.+|.. . .+++|++||+
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~ 70 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP----------AGVQTLIADVTRPDTLASIVHLRPEILVYC 70 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC----------TTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc----------cCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence 457899999 599999999999999999999999876532 23455666621 1 1359999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC-----------CchhhHHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP-----------RMSLYASAK 186 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~-----------~~~~Y~asK 186 (349)
||... ++.+..+++|+.++.++++++.. .+.+++|++||.+.+...+ ....|+.+|
T Consensus 71 a~~~~----------~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 137 (286)
T 3gpi_A 71 VAASE----------YSDEHYRLSYVEGLRNTLSALEG---APLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRM 137 (286)
T ss_dssp HHHHH----------HC-----CCSHHHHHHHHHHTTT---SCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHH
T ss_pred CCCCC----------CCHHHHHHHHHHHHHHHHHHHhh---CCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHH
Confidence 98621 33467889999999999998863 2337999999987653222 356899999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.+.+.+ +.. ++++++.||.+..+........... ... ..........+.++|+|++++.++.+
T Consensus 138 ~~~E~~-~~~-------~~~~ilR~~~v~G~~~~~~~~~~~~-~~~-~~~~~~~~~~i~v~Dva~~~~~~~~~ 200 (286)
T 3gpi_A 138 LEAEAL-LAA-------YSSTILRFSGIYGPGRLRMIRQAQT-PEQ-WPARNAWTNRIHRDDGAAFIAYLIQQ 200 (286)
T ss_dssp HHHHHH-GGG-------SSEEEEEECEEEBTTBCHHHHHTTC-GGG-SCSSBCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHH-Hhc-------CCeEEEecccccCCCchhHHHHHHh-ccc-CCCcCceeEEEEHHHHHHHHHHHHhh
Confidence 999888 542 6889999998877654311100000 000 00111223467789999999999987
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.70 E-value=7e-17 Score=146.53 Aligned_cols=179 Identities=9% Similarity=-0.000 Sum_probs=125.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKR--KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnA 118 (349)
|+++||||+|+||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. +...++|++||+|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a 74 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD------QGVEVRHGDYNQPESLQKAFAGVSKLLFIS 74 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH------TTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh------cCCeEEEeccCCHHHHHHHHhcCCEEEEcC
Confidence 46999999999999999999999 9999999998776554322 1355667772 2345789999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRF 198 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~ 198 (349)
|.. . ++ ++|+.++.++++++... +.+++|++||..+. . ....|+.+|.+.+.+.+.
T Consensus 75 ~~~--------~--~~-----~~n~~~~~~l~~a~~~~---~~~~~v~~Ss~~~~-~--~~~~y~~~K~~~E~~~~~--- 130 (287)
T 2jl1_A 75 GPH--------Y--DN-----TLLIVQHANVVKAARDA---GVKHIAYTGYAFAE-E--SIIPLAHVHLATEYAIRT--- 130 (287)
T ss_dssp CCC--------S--CH-----HHHHHHHHHHHHHHHHT---TCSEEEEEEETTGG-G--CCSTHHHHHHHHHHHHHH---
T ss_pred CCC--------c--Cc-----hHHHHHHHHHHHHHHHc---CCCEEEEECCCCCC-C--CCCchHHHHHHHHHHHHH---
Confidence 852 1 11 67999999999888542 23699999998764 2 234799999999998863
Q ss_pred HhcCCeeEEEEecCcccCCCCCCcccccc-chhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 199 ELNDEVGITIATHGWIGIEMTKGKFMLED-GAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 199 el~~~I~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
..++++.+.||.+.++.......... ...... .........++++|+|++++.+++++
T Consensus 131 ---~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~~~~~ 189 (287)
T 2jl1_A 131 ---TNIPYTFLRNALYTDFFVNEGLRASTESGAIVT-NAGSGIVNSVTRNELALAAATVLTEE 189 (287)
T ss_dssp ---TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEE-SCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred ---cCCCeEEEECCEeccccchhhHHHHhhCCceec-cCCCCccCccCHHHHHHHHHHHhcCC
Confidence 23899999999887654221110000 000000 00112336788999999999999874
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.6e-16 Score=142.81 Aligned_cols=187 Identities=13% Similarity=0.037 Sum_probs=126.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccccc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEE 128 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~~~ 128 (349)
+++||||+|+||++++++|+++|++|++++|.+..+..... +. .-.+. .++|++||+||......
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~-~~----------~~~~~-~~~d~vi~~a~~~~~~~--- 71 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQ-VQ----------QVVQE-IRPHIIIHCAAYTKVDQ--- 71 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHH-HH----------HHHHH-HCCSEEEECCCCCCHHH---
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHH-HH----------HHHHh-cCCCEEEECCcccChHH---
Confidence 89999999999999999999999999999995433221110 00 00000 16899999999864321
Q ss_pred cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHHHHHHHHHHHHH
Q 039397 129 VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAKAALVTFYESLR 197 (349)
Q Consensus 129 ~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la 197 (349)
..++++..+++|+.++.++++++.+. +.++|++||.+.+.+. .....|+.+|.+.+.+++.++
T Consensus 72 --~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~ 145 (287)
T 3sc6_A 72 --AEKERDLAYVINAIGARNVAVASQLV----GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELH 145 (287)
T ss_dssp --HTTCHHHHHHHHTHHHHHHHHHHHHH----TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHC
T ss_pred --HhcCHHHHHHHHHHHHHHHHHHHHHc----CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 12457899999999999999998643 4589999998765332 235689999999999998764
Q ss_pred HHhcCCeeEEEEecCcccCCCCCCccccccch---hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 198 FELNDEVGITIATHGWIGIEMTKGKFMLEDGA---EMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 198 ~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
. .++.+.|+.+..+.........-.. ..............+.++|+|++++.+++++..
T Consensus 146 ~------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~ 207 (287)
T 3sc6_A 146 N------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSLY 207 (287)
T ss_dssp S------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCCC
T ss_pred C------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCCC
Confidence 2 4578889888766432211000000 000000001123466799999999999998753
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.1e-16 Score=141.70 Aligned_cols=191 Identities=13% Similarity=-0.024 Sum_probs=124.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------c--cCCCccee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------K--ESKAVDHL 114 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~--~~g~iDvl 114 (349)
.|++++||||||+|+||++++++|+++|+ +...... .+..+.+|. + +..++|++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~~~d~V 65 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGEDWV-----------FVSSKDADLTDTAQTRALFEKVQPTHV 65 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCEEE-----------ECCTTTCCTTSHHHHHHHHHHSCCSEE
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccccc-----------ccCceecccCCHHHHHHHHhhcCCCEE
Confidence 35678999999999999999999999998 1111100 000011220 0 11258999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC----------------CCC
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP----------------LPR 178 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~----------------~~~ 178 (349)
||+||...... . ..++.+..+++|+.|+.++++++... +.+++|++||.+.+.. .|.
T Consensus 66 ih~A~~~~~~~--~--~~~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~ 138 (319)
T 4b8w_A 66 IHLAAMVGGLF--R--NIKYNLDFWRKNVHMNDNVLHSAFEV---GARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNS 138 (319)
T ss_dssp EECCCCCCCHH--H--HTTCHHHHHHHHHHHHHHHHHHHHHT---TCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSS
T ss_pred EECceeccccc--c--cccCHHHHHHHHHHHHHHHHHHHHHc---CCCeEEEEcchhhcCCCCCCCccccccccCCCCCC
Confidence 99999843211 1 12456788999999999999998643 2358999999866421 222
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccc--hhhhh----HHHHh---------hhcCC
Q 039397 179 MSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDG--AEMQW----KEERE---------VHVAG 243 (349)
Q Consensus 179 ~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~----~~~~~---------~~~~~ 243 (349)
...|+.+|.+.+.+++.++.+.+ ++++++.|+.+-.+..........- ..... ..... .....
T Consensus 139 ~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 216 (319)
T 4b8w_A 139 NFGYSYAKRMIDVQNRAYFQQYG--CTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQF 216 (319)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECE
T ss_pred cchHHHHHHHHHHHHHHHHHhhC--CCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEE
Confidence 33699999999999999988764 7899999998877654321000000 00000 00000 11234
Q ss_pred CCHHHHHHHHHHHHhcC
Q 039397 244 GPVEDFARLIVSGACRG 260 (349)
Q Consensus 244 ~~~edvA~~i~~l~~~~ 260 (349)
+.++|+|++++.++.+.
T Consensus 217 i~v~Dva~a~~~~~~~~ 233 (319)
T 4b8w_A 217 IYSLDLAQLFIWVLREY 233 (319)
T ss_dssp EEHHHHHHHHHHHHHHC
T ss_pred EeHHHHHHHHHHHHhcc
Confidence 67899999999999874
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-15 Score=136.97 Aligned_cols=182 Identities=9% Similarity=-0.010 Sum_probs=120.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc--CCCcceeeecCcCCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE--SKAVDHLVNTASLGHTFF 125 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~--~g~iDvlVnnAg~~~~~~ 125 (349)
++|+|||| |+||++++++|+++|++|++++|+.++.+.... ..+..+.+|... ..++|++||+||.....
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~- 77 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPSLDGVTHLLISTAPDSGG- 77 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCCCTTCCEEEECCCCBTTB-
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccccCCCCEEEECCCccccc-
Confidence 68999998 999999999999999999999999877654432 246677777433 67899999999965321
Q ss_pred ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHHHHHHHHHH
Q 039397 126 FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAKAALVTFYE 194 (349)
Q Consensus 126 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~ 194 (349)
+.. ...+++++... ..+.+++|++||.+.+... .....|+.+|.+.+.+.+
T Consensus 78 -------~~~----------~~~l~~a~~~~-~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 139 (286)
T 3ius_A 78 -------DPV----------LAALGDQIAAR-AAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQ 139 (286)
T ss_dssp -------CHH----------HHHHHHHHHHT-GGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred -------cHH----------HHHHHHHHHhh-cCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 111 01222222211 1233799999998654322 224579999999999888
Q ss_pred HHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 195 SLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 195 ~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
.+ ..++++++.||.+..+..........+........ ......+.++|+|++++.+++++.
T Consensus 140 ~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~ 200 (286)
T 3ius_A 140 AV-----PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD 200 (286)
T ss_dssp HS-----TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC
T ss_pred hh-----cCCCEEEEeccceECCCchHHHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC
Confidence 76 23899999999887664322111111100000000 123356778999999999999865
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.2e-16 Score=142.98 Aligned_cols=182 Identities=15% Similarity=0.029 Sum_probs=123.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCC--CcceeeecCcCCCCccc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESK--AVDHLVNTASLGHTFFF 126 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g--~iDvlVnnAg~~~~~~~ 126 (349)
+++||||+|+||++++++|+ +|++|++++|+..... .++.+.. .. .+... ++|++||+||......
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~---~D~~d~~------~~-~~~~~~~~~d~vih~a~~~~~~~- 69 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFC---GDFSNPK------GV-AETVRKLRPDVIVNAAAHTAVDK- 69 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSC---CCTTCHH------HH-HHHHHHHCCSEEEECCCCCCHHH-
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEecccccccc---ccCCCHH------HH-HHHHHhcCCCEEEECcccCCHhh-
Confidence 69999999999999999999 8999999999862110 0110000 00 01111 5899999999753221
Q ss_pred cccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCC-----------CchhhHHHHHHHHHHHHH
Q 039397 127 EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLP-----------RMSLYASAKAALVTFYES 195 (349)
Q Consensus 127 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~-----------~~~~Y~asKaal~~l~~~ 195 (349)
..++++..+++|+.++.++++++... +.++|++||.+.+.+.+ ....|+.+|.+.+.+++.
T Consensus 70 ----~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 141 (299)
T 1n2s_A 70 ----AESEPELAQLLNATSVEAIAKAANET----GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (299)
T ss_dssp ----HTTCHHHHHHHHTHHHHHHHHHHTTT----TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred ----hhcCHHHHHHHHHHHHHHHHHHHHHc----CCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 12456889999999999999998653 34899999987654322 256899999999999887
Q ss_pred HHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHH-------hhhcCCCCHHHHHHHHHHHHhcC
Q 039397 196 LRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEER-------EVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 196 la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
++. +++++.||.+.++........ ........ ......+.++|+|++++.+++++
T Consensus 142 ~~~------~~~ilRp~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 203 (299)
T 1n2s_A 142 NCP------KHLIFRTSWVYAGKGNNFAKT----MLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVA 203 (299)
T ss_dssp HCS------SEEEEEECSEECSSSCCHHHH----HHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHH
T ss_pred hCC------CeEEEeeeeecCCCcCcHHHH----HHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHh
Confidence 642 788999999987754321100 00000000 01234556899999999999764
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.8e-16 Score=141.48 Aligned_cols=176 Identities=12% Similarity=0.086 Sum_probs=117.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKR--KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnAg 119 (349)
+++||||+|+||++++++|+++ |++|++++|+.++.+.... ..+..+.+|. +...++|++||+||
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA------QGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH------TTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc------CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4899999999999999999999 9999999998776554322 1355667772 33457899999998
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHH
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e 199 (349)
.. . + .|+.++.++++++... +.+++|++||..+. +....|+.+|.+.+.+.+.
T Consensus 75 ~~--------~--~-------~~~~~~~~l~~a~~~~---~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~~~---- 127 (286)
T 2zcu_A 75 SE--------V--G-------QRAPQHRNVINAAKAA---GVKFIAYTSLLHAD---TSPLGLADEHIETEKMLAD---- 127 (286)
T ss_dssp ------------------------CHHHHHHHHHHHH---TCCEEEEEEETTTT---TCCSTTHHHHHHHHHHHHH----
T ss_pred CC--------c--h-------HHHHHHHHHHHHHHHc---CCCEEEEECCCCCC---CCcchhHHHHHHHHHHHHH----
Confidence 52 0 1 2666777777766432 23799999998875 2335799999999998864
Q ss_pred hcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 200 LNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 200 l~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
. .++++++.||++.++................ .........++++|+|++++.+++++
T Consensus 128 ~--~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~~~~~ 185 (286)
T 2zcu_A 128 S--GIVYTLLRNGWYSENYLASAPAALEHGVFIG-AAGDGKIASATRADYAAAAARVISEA 185 (286)
T ss_dssp H--CSEEEEEEECCBHHHHHTTHHHHHHHTEEEE-SCTTCCBCCBCHHHHHHHHHHHHHSS
T ss_pred c--CCCeEEEeChHHhhhhHHHhHHhhcCCceec-cCCCCccccccHHHHHHHHHHHhcCC
Confidence 1 2899999999887654311100000000000 00112345778999999999999874
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.3e-15 Score=141.75 Aligned_cols=177 Identities=14% Similarity=0.053 Sum_probs=125.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-eEEEEecC-c-chhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCcc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-NLVLVARR-E-NRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFF 125 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~-~-~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~ 125 (349)
+|+||||+|+||++++++|+++|+ +|+..+|+ . +.+++..+ ++|++||+||....
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~--------------------~~d~Vih~a~~~~~-- 59 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALL--------------------KADFIVHLAGVNRP-- 59 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHH--------------------HCSEEEECCCSBCT--
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhc--------------------cCCEEEECCcCCCC--
Confidence 699999999999999999999999 99999994 2 22222111 47999999997542
Q ss_pred ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCee
Q 039397 126 FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205 (349)
Q Consensus 126 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~I~ 205 (349)
++.+..+++|+.++.++++++...- .+.++|++||...+. ...|+.+|.+.+.+++.++.+.+ ++
T Consensus 60 -------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~~~g--~~ 124 (369)
T 3st7_A 60 -------EHDKEFSLGNVSYLDHVLDILTRNT--KKPAILLSSSIQATQ----DNPYGESKLQGEQLLREYAEEYG--NT 124 (369)
T ss_dssp -------TCSTTCSSSCCBHHHHHHHHHTTCS--SCCEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHHHHC--CC
T ss_pred -------CCHHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEeCchhhcC----CCCchHHHHHHHHHHHHHHHHhC--CC
Confidence 2234567889999999999986431 114899999988764 67899999999999999988765 68
Q ss_pred EEEEecCcccCCCCCCccccccchhhhhHHH--------HhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 206 ITIATHGWIGIEMTKGKFMLEDGAEMQWKEE--------REVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 206 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
++.+.|+.+-.+.........-......... .......+.++|+|++++.++.++..
T Consensus 125 ~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 189 (369)
T 3st7_A 125 VYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT 189 (369)
T ss_dssp EEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC
T ss_pred EEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc
Confidence 8999999887664332110000000000000 01112355689999999999988754
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-15 Score=138.84 Aligned_cols=185 Identities=12% Similarity=0.059 Sum_probs=119.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTA 118 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnA 118 (349)
+|+++||||+|+||++++++|+++| ++|++++|+.++... ..+.. ..+..+.+|. +...++|++||||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a 80 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALNGAYATFIVT 80 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence 5799999999999999999999999 999999998765431 11211 2356677772 2345799999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC---CCchhhHHHHHHHHHHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL---PRMSLYASAKAALVTFYES 195 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~---~~~~~Y~asKaal~~l~~~ 195 (349)
|.... . ..+.|+.+...+++++.. .+.++||++||. +..+. +....|+.+|++++.+.+.
T Consensus 81 ~~~~~------~-------~~~~~~~~~~~~~~aa~~---~gv~~iv~~S~~-~~~~~~~~~~~~~y~~sK~~~e~~~~~ 143 (299)
T 2wm3_A 81 NYWES------C-------SQEQEVKQGKLLADLARR---LGLHYVVYSGLE-NIKKLTAGRLAAAHFDGKGEVEEYFRD 143 (299)
T ss_dssp CHHHH------T-------CHHHHHHHHHHHHHHHHH---HTCSEEEECCCC-CHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred CCCcc------c-------cchHHHHHHHHHHHHHHH---cCCCEEEEEcCc-cccccCCCcccCchhhHHHHHHHHHHH
Confidence 85210 0 123455555555555432 133789995554 33222 1246799999999998865
Q ss_pred HHHHhcCCeeEEEEecCcccCCCCCCcccc--ccch--hhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 196 LRFELNDEVGITIATHGWIGIEMTKGKFML--EDGA--EMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 196 la~el~~~I~v~~v~PG~v~T~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
. .++++++.||++.+++....... ..+. ..... ........++++|+|++++.++.+
T Consensus 144 ~------gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~i~~~Dva~~~~~~l~~ 204 (299)
T 2wm3_A 144 I------GVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLP-TGDVPMDGMSVSDLGPVVLSLLKM 204 (299)
T ss_dssp H------TCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCC-CTTSCEEEECGGGHHHHHHHHHHS
T ss_pred C------CCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEec-CCCCccceecHHHHHHHHHHHHcC
Confidence 2 27999999999988764422111 0000 00000 011223466889999999999875
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.6e-15 Score=147.77 Aligned_cols=196 Identities=9% Similarity=-0.008 Sum_probs=128.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFF 126 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~ 126 (349)
+++||||||+|+||.+++++|+++|++|++++|+..+.+....++. ..+.+...++|++||+||......
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~---------~~~~~~l~~~D~Vih~A~~~~~~~- 216 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPL---------NPASDLLDGADVLVHLAGEPIFGR- 216 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTT---------SCCTTTTTTCSEEEECCCC------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeeccc---------chhHHhcCCCCEEEECCCCccccc-
Confidence 6799999999999999999999999999999999876432211111 112345578999999999764431
Q ss_pred cccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------CCCchhhHHHHHHHHHHHHH
Q 039397 127 EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------LPRMSLYASAKAALVTFYES 195 (349)
Q Consensus 127 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~ 195 (349)
. ..+..+.++++|+.|+.++++++... .+.+++|++||.+.+.+ .+....|+.+|...+.+.+.
T Consensus 217 --~-~~~~~~~~~~~Nv~gt~~ll~a~a~~--~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~ 291 (516)
T 3oh8_A 217 --F-NDSHKEAIRESRVLPTKFLAELVAES--TQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAP 291 (516)
T ss_dssp --C-CGGGHHHHHHHTHHHHHHHHHHHHHC--SSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHH
T ss_pred --c-chhHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHH
Confidence 1 23557889999999999999984422 23369999999775531 11345788889887766543
Q ss_pred HHHHhcCCeeEEEEecCcccCCCCCCccccc----cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 196 LRFELNDEVGITIATHGWIGIEMTKGKFMLE----DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 196 la~el~~~I~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
.. + ..++++++.||.+.++... ..... .................+.++|+|++++.++.++.
T Consensus 292 ~~-~--~gi~~~ilRp~~v~Gp~~~-~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~ 357 (516)
T 3oh8_A 292 AS-D--AGKRVAFIRTGVALSGRGG-MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ 357 (516)
T ss_dssp HH-H--TTCEEEEEEECEEEBTTBS-HHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT
T ss_pred HH-h--CCCCEEEEEeeEEECCCCC-hHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc
Confidence 32 1 1289999999999876421 00000 00000000000112345678999999999998764
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=5.4e-15 Score=138.56 Aligned_cols=187 Identities=12% Similarity=0.000 Sum_probs=121.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-cc-------cCCCcceeee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-NK-------ESKAVDHLVN 116 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~-------~~g~iDvlVn 116 (349)
+++|+++||||+|+||++++++|+++|++|++++|+.++... ..+... ..+..+.+| .. ...++|++||
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~~-~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAI-PNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTS-TTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhhc-CCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 456889999999999999999999999999999998776421 122211 246667777 42 2356899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccc-cccCCCCchhhHHHHHHHHHHHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVE-NWLPLPRMSLYASAKAALVTFYE 194 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~-~~~~~~~~~~Y~asKaal~~l~~ 194 (349)
|++... . +.|..+ .++++++... + .++||++||.. +..+.+....|+.+|++.+.+++
T Consensus 80 ~a~~~~--------~--------~~~~~~-~~l~~aa~~~---g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~ 139 (352)
T 1xgk_A 80 NTTSQA--------G--------DEIAIG-KDLADAAKRA---GTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVR 139 (352)
T ss_dssp CCCSTT--------S--------CHHHHH-HHHHHHHHHH---SCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHH
T ss_pred cCCCCC--------c--------HHHHHH-HHHHHHHHHc---CCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHH
Confidence 987531 0 124444 5555555321 2 36999999987 34444555789999999999987
Q ss_pred HHHHHhcCCeeEEEEecCcccCCCCCCc---ccc---ccchh-hhhHHHHhhhcCCCCH-HHHHHHHHHHHhcC
Q 039397 195 SLRFELNDEVGITIATHGWIGIEMTKGK---FML---EDGAE-MQWKEEREVHVAGGPV-EDFARLIVSGACRG 260 (349)
Q Consensus 195 ~la~el~~~I~v~~v~PG~v~T~~~~~~---~~~---~~~~~-~~~~~~~~~~~~~~~~-edvA~~i~~l~~~~ 260 (349)
.+ .+++++++||++.+...... +.. ..+.. .............+++ +|+|++++.++.++
T Consensus 140 ~~------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~ 207 (352)
T 1xgk_A 140 QL------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG 207 (352)
T ss_dssp TS------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred Hc------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCC
Confidence 63 37889999998755443211 000 00000 0000001112246678 89999999999763
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-14 Score=131.40 Aligned_cols=179 Identities=15% Similarity=0.054 Sum_probs=113.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-------chhhhHHHHhcCCCCeEEEEEecc-------ccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-------NRLQGSTIDEYNPINEVTLVSLNN-------KESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-------~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iD 112 (349)
+++|+||||+|+||++++++|+++|++|++++|+. ++.+.. .++.. ..+..+.+|. +...++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~~~d 78 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIKQVD 78 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHTTCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHhCCC
Confidence 46899999999999999999999999999999986 333322 12211 2356677772 2235799
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccccc------CCCCchhhHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWL------PLPRMSLYASA 185 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~------~~~~~~~Y~as 185 (349)
++|||||... +.+..++++++.. .+ -+++| .|..+.. ..|....| .+
T Consensus 79 ~vi~~a~~~~--------------------~~~~~~l~~aa~~---~g~v~~~v--~S~~g~~~~~~~~~~p~~~~y-~s 132 (307)
T 2gas_A 79 IVICAAGRLL--------------------IEDQVKIIKAIKE---AGNVKKFF--PSEFGLDVDRHDAVEPVRQVF-EE 132 (307)
T ss_dssp EEEECSSSSC--------------------GGGHHHHHHHHHH---HCCCSEEE--CSCCSSCTTSCCCCTTHHHHH-HH
T ss_pred EEEECCcccc--------------------cccHHHHHHHHHh---cCCceEEe--ecccccCcccccCCCcchhHH-HH
Confidence 9999999632 2233444554432 12 35776 3444421 23345689 99
Q ss_pred HHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc----ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 186 KAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML----EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++++.+.+.. + ++++.++||++.+++....... ..................++++|+|++++.++.++
T Consensus 133 K~~~e~~~~~~----~--i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~ 205 (307)
T 2gas_A 133 KASIRRVIEAE----G--VPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDP 205 (307)
T ss_dssp HHHHHHHHHHH----T--CCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHc----C--CCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCc
Confidence 99999887632 2 7889999999887654322110 00000000011112235678999999999999865
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.3e-14 Score=133.69 Aligned_cols=183 Identities=13% Similarity=-0.032 Sum_probs=117.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc----hhhhHHHHhcCCCCeEEEEEeccc-------cCC--Cc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN----RLQGSTIDEYNPINEVTLVSLNNK-------ESK--AV 111 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~----~l~~~~~~~~~~~~~~~~~~~d~~-------~~g--~i 111 (349)
|++++|+||||+|+||++++++|+++|++|++++|+.. +.+.. ..+. ...+..+.+|.. .+. ++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF-KALE--DKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHH--HTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHH--hCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 45678999999999999999999999999999999872 22211 1221 134667777732 223 79
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----CCCCchhhHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----PLPRMSLYASAK 186 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----~~~~~~~Y~asK 186 (349)
|++||+||.. |+.+..++++++...- .-.++|. | ..+.. +.+....|+.+|
T Consensus 85 d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~g--~v~~~v~-S-~~g~~~~e~~~~~p~~~y~~sK 140 (346)
T 3i6i_A 85 DIVVSTVGGE--------------------SILDQIALVKAMKAVG--TIKRFLP-S-EFGHDVNRADPVEPGLNMYREK 140 (346)
T ss_dssp CEEEECCCGG--------------------GGGGHHHHHHHHHHHC--CCSEEEC-S-CCSSCTTTCCCCTTHHHHHHHH
T ss_pred CEEEECCchh--------------------hHHHHHHHHHHHHHcC--CceEEee-c-ccCCCCCccCcCCCcchHHHHH
Confidence 9999999861 7777788888775431 1246664 4 33321 224557899999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc----cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE----DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.+++.+.+. ..+.++.+.||.+............ .................++++|+|++++.++.++
T Consensus 141 ~~~e~~l~~------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~ 212 (346)
T 3i6i_A 141 RRVRQLVEE------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDV 212 (346)
T ss_dssp HHHHHHHHH------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHH------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCc
Confidence 999888765 1278899999988765433221100 0000001111112335778899999999999875
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-14 Score=130.25 Aligned_cols=179 Identities=13% Similarity=0.088 Sum_probs=112.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecCcC
Q 039397 49 VVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTASL 120 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnAg~ 120 (349)
+|+||||+|+||++++++|.++ |++|++++|+.++..... ...+.++.+|. +...++|++|||||.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~------~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW------RGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG------BTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh------hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 5999999999999999999998 999999999987765432 12467777772 345689999999986
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e 199 (349)
... . ..|+.++.++++++. +.+ ++||++||.......+ |..+|... +.+....+
T Consensus 76 ~~~---------~------~~~~~~~~~l~~aa~----~~gv~~iv~~Ss~~~~~~~~----~~~~~~~~--~~e~~~~~ 130 (289)
T 3e48_A 76 IHP---------S------FKRIPEVENLVYAAK----QSGVAHIIFIGYYADQHNNP----FHMSPYFG--YASRLLST 130 (289)
T ss_dssp CCS---------H------HHHHHHHHHHHHHHH----HTTCCEEEEEEESCCSTTCC----STTHHHHH--HHHHHHHH
T ss_pred Ccc---------c------hhhHHHHHHHHHHHH----HcCCCEEEEEcccCCCCCCC----CccchhHH--HHHHHHHH
Confidence 421 1 225666666666554 333 7999999976533322 33333211 22222222
Q ss_pred hcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 200 LNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 200 l~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
.+ ++++.+.||++.+++............... .........++++|+|++++.++.++.
T Consensus 131 ~g--~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~i~~~Dva~~~~~~l~~~~ 189 (289)
T 3e48_A 131 SG--IDYTYVRMAMYMDPLKPYLPELMNMHKLIY-PAGDGRINYITRNDIARGVIAIIKNPD 189 (289)
T ss_dssp HC--CEEEEEEECEESTTHHHHHHHHHHHTEECC-CCTTCEEEEECHHHHHHHHHHHHHCGG
T ss_pred cC--CCEEEEeccccccccHHHHHHHHHCCCEec-CCCCceeeeEEHHHHHHHHHHHHcCCC
Confidence 22 899999999998774321000000000000 000111236789999999999998764
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=5.2e-14 Score=129.09 Aligned_cols=183 Identities=13% Similarity=0.012 Sum_probs=115.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-----hhhHHHHhcCCCCeEEEEEecc-------ccCCCccee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-----LQGSTIDEYNPINEVTLVSLNN-------KESKAVDHL 114 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-----l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvl 114 (349)
.++|+||||+|+||++++++|+++|++|++++|+... .+.+ ..+.. ..+..+.+|. +...++|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~--~~~~~~~~D~~d~~~l~~~~~~~d~v 80 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFKQ--LGAKLIEASLDDHQRLVDALKQVDVV 80 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHHT--TTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHHh--CCeEEEeCCCCCHHHHHHHHhCCCEE
Confidence 4679999999999999999999999999999998532 2211 12221 2466677772 234579999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccccc------C-CCCchhhHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWL------P-LPRMSLYASAK 186 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~------~-~~~~~~Y~asK 186 (349)
||++|..... .|+.+..++++++... + -+++|+ |..+.. + .|....| .+|
T Consensus 81 i~~a~~~~~~----------------~~~~~~~~l~~aa~~~---g~v~~~v~--S~~g~~~~~~~~~~~p~~~~y-~sK 138 (313)
T 1qyd_A 81 ISALAGGVLS----------------HHILEQLKLVEAIKEA---GNIKRFLP--SEFGMDPDIMEHALQPGSITF-IDK 138 (313)
T ss_dssp EECCCCSSSS----------------TTTTTHHHHHHHHHHS---CCCSEEEC--SCCSSCTTSCCCCCSSTTHHH-HHH
T ss_pred EECCccccch----------------hhHHHHHHHHHHHHhc---CCCceEEe--cCCcCCccccccCCCCCcchH-HHH
Confidence 9999975321 2566666677766432 2 357874 443321 1 2445678 999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc-----ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML-----EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.+++.+.+. . .+.++.+.||++.+++....... ..................++++|+|++++.++.++
T Consensus 139 ~~~e~~~~~----~--g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~ 211 (313)
T 1qyd_A 139 RKVRRAIEA----A--SIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP 211 (313)
T ss_dssp HHHHHHHHH----T--TCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHh----c--CCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCc
Confidence 999888753 2 26778889988765433221110 00000000011112235678999999999999865
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=7.6e-13 Score=123.85 Aligned_cols=191 Identities=14% Similarity=0.009 Sum_probs=122.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-----CeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc-------cCC---Cc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRK-----ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK-------ESK---AV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G-----~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~-------~~g---~i 111 (349)
+|+|+||||+|+||.+++++|+++| ++|++++|+..... . ....+..+.+|.. ... ++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 73 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H--EDNPINYVQCDISDPDDSQAKLSPLTDV 73 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C--CSSCCEEEECCTTSHHHHHHHHTTCTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c--ccCceEEEEeecCCHHHHHHHHhcCCCC
Confidence 4789999999999999999999999 99999999876543 1 1235667777721 122 39
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEE-------EEeccccccCC--------
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVV-------VNASVENWLPL-------- 176 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV-------~isS~~~~~~~-------- 176 (349)
|++||+||... ++.+..+++|+.++.++++++.+... +-.++| ++||.+.+...
T Consensus 74 d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~ 142 (364)
T 2v6g_A 74 THVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCP-NLKHISLQTGRKHYMGPFESYGKIESHDPPYT 142 (364)
T ss_dssp CEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCT-TCCEEEEECCTHHHHCCGGGTTTSCCCCSSBC
T ss_pred CEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhcc-ccceEEeccCceEEEechhhccccccCCCCCC
Confidence 99999999641 34578999999999999999987531 124665 67887543211
Q ss_pred ------CCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccch-hhhhH--HHH----------
Q 039397 177 ------PRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGA-EMQWK--EER---------- 237 (349)
Q Consensus 177 ------~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~--~~~---------- 237 (349)
|....|. +.+.+.+.++.+.+ .++++++.|+.+-.+............ ..... ...
T Consensus 143 E~~~~~~~~~~y~----~~E~~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 217 (364)
T 2v6g_A 143 EDLPRLKYMNFYY----DLEDIMLEEVEKKE-GLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKA 217 (364)
T ss_dssp TTSCCCSSCCHHH----HHHHHHHHHHTTST-TCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHH
T ss_pred ccccCCccchhhH----HHHHHHHHHhhcCC-CceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcc
Confidence 2234563 34455544443221 279999999998776443211000000 00000 000
Q ss_pred --hhhcCCCCHHHHHHHHHHHHhcC
Q 039397 238 --EVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 238 --~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.......+++|+|++++.++.++
T Consensus 218 ~~~~~~~~~~v~Dva~a~~~~~~~~ 242 (364)
T 2v6g_A 218 AWDGYSDCSDADLIAEHHIWAAVDP 242 (364)
T ss_dssp HHHSCBCCEEHHHHHHHHHHHHHCG
T ss_pred cccccCCCCcHHHHHHHHHHHHhCC
Confidence 01123445699999999999765
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=7.2e-14 Score=128.68 Aligned_cols=180 Identities=12% Similarity=0.008 Sum_probs=106.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTAS 119 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnAg 119 (349)
.|+++||||+|+||++++++|+++|++|++++|+.+...+...++.. ..+..+.+|. +...++|++||+||
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 36799999999999999999999999999999987522221122211 2356677773 23356999999998
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccC------CCCchhhHHHHHHHHHH
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLP------LPRMSLYASAKAALVTF 192 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~------~~~~~~Y~asKaal~~l 192 (349)
... +.+..++++++... + .+++|. |..+... .|....| .+|++++.+
T Consensus 89 ~~~--------------------~~~~~~l~~aa~~~---g~v~~~v~--S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~ 142 (318)
T 2r6j_A 89 FPQ--------------------ILDQFKILEAIKVA---GNIKRFLP--SDFGVEEDRINALPPFEALI-ERKRMIRRA 142 (318)
T ss_dssp GGG--------------------STTHHHHHHHHHHH---CCCCEEEC--SCCSSCTTTCCCCHHHHHHH-HHHHHHHHH
T ss_pred hhh--------------------hHHHHHHHHHHHhc---CCCCEEEe--eccccCcccccCCCCcchhH-HHHHHHHHH
Confidence 531 22333444444321 2 357763 4433211 1224578 999999888
Q ss_pred HHHHHHHhcCCeeEEEEecCcccCCCCCCcccc-ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 193 YESLRFELNDEVGITIATHGWIGIEMTKGKFML-EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 193 ~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.+. . .+.++.+.||++...+....... ..................++++|+|++++.++.++
T Consensus 143 ~~~----~--~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~ 205 (318)
T 2r6j_A 143 IEE----A--NIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDP 205 (318)
T ss_dssp HHH----T--TCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCG
T ss_pred HHh----c--CCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCc
Confidence 764 2 26778888887654321110000 00000000001112235677899999999998765
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.5e-14 Score=130.86 Aligned_cols=178 Identities=15% Similarity=0.070 Sum_probs=108.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-c-----hhhhHHHHhcCCCCeEEEEEecc-------ccCCCccee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-N-----RLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHL 114 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~-----~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvl 114 (349)
++|+||||+|+||++++++|+++|++|++++|+. . +.+.+ ..+.. ..+..+.+|. +...++|++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l-~~~~~--~~v~~v~~D~~d~~~l~~a~~~~d~v 81 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLR-EEFRS--MGVTIIEGEMEEHEKMVSVLKQVDIV 81 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHH-HHhhc--CCcEEEEecCCCHHHHHHHHcCCCEE
Confidence 5799999999999999999999999999999986 2 22111 11211 2366777772 234569999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccccc------CCCCchhhHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWL------PLPRMSLYASAKA 187 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~------~~~~~~~Y~asKa 187 (349)
|||||... +.+..++++++... + -+++| .|..+.. ..|....| .+|+
T Consensus 82 i~~a~~~~--------------------~~~~~~l~~aa~~~---g~v~~~v--~S~~g~~~~~~~~~~p~~~~y-~sK~ 135 (321)
T 3c1o_A 82 ISALPFPM--------------------ISSQIHIINAIKAA---GNIKRFL--PSDFGCEEDRIKPLPPFESVL-EKKR 135 (321)
T ss_dssp EECCCGGG--------------------SGGGHHHHHHHHHH---CCCCEEE--CSCCSSCGGGCCCCHHHHHHH-HHHH
T ss_pred EECCCccc--------------------hhhHHHHHHHHHHh---CCccEEe--ccccccCccccccCCCcchHH-HHHH
Confidence 99998631 33444455554321 2 35777 3444421 11224579 9999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccc----cccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFM----LEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+++.+.+.. + +.++.+.||++..+....... ...................++++|+|++++.++.++
T Consensus 136 ~~e~~~~~~----~--~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~ 206 (321)
T 3c1o_A 136 IIRRAIEAA----A--LPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDP 206 (321)
T ss_dssp HHHHHHHHH----T--CCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHc----C--CCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCc
Confidence 999888632 2 677778888775432211000 000000000011112235678899999999999865
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=9.2e-13 Score=120.14 Aligned_cols=194 Identities=11% Similarity=0.023 Sum_probs=117.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccccc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEE 128 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~~~ 128 (349)
+||||||||.||++++++|.++|++|+++.|++...+ +.....|.+....+|.+||.||.........
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~------------~~~~~~~~~~l~~~d~vihla~~~i~~~~~~ 69 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR------------ITWDELAASGLPSCDAAVNLAGENILNPLRR 69 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE------------EEHHHHHHHCCCSCSEEEECCCCCSSCTTSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe------------eecchhhHhhccCCCEEEEeccCcccchhhh
Confidence 5999999999999999999999999999999865321 1111233455668999999998643333222
Q ss_pred cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHHHHHHHHHHHHH
Q 039397 129 VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAKAALVTFYESLR 197 (349)
Q Consensus 129 ~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la 197 (349)
. +.+..+..++.|+.++.++.+++...- .+...+|+.||...+... .....|+..|...+..
T Consensus 70 ~-~~~~~~~~~~~~v~~t~~l~~~~~~~~-~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~----- 142 (298)
T 4b4o_A 70 W-NETFQKEVLGSRLETTQLLAKAITKAP-QPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAA----- 142 (298)
T ss_dssp C-CHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHH-----
T ss_pred h-hhhhhhhhhhHHHHHHHHHHHHHHHhC-CCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHH-----
Confidence 2 224456788999999988887765431 122456777776654321 1234455555544332
Q ss_pred HHhcCC-eeEEEEecCcccCCCCCCccccccc---hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 198 FELNDE-VGITIATHGWIGIEMTKGKFMLEDG---AEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 198 ~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
...... +++..+.||.+..+-.......... ..............++..+|+|+++..+++++.
T Consensus 143 ~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~ 210 (298)
T 4b4o_A 143 ARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH 210 (298)
T ss_dssp HCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT
T ss_pred HHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCC
Confidence 122333 8999999998876632100000000 000000001112234567999999999998764
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.5e-13 Score=125.73 Aligned_cols=180 Identities=13% Similarity=0.033 Sum_probs=108.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchh--hh---HHHHhcCCCCeEEEEEeccc-------cCCCccee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL--QG---STIDEYNPINEVTLVSLNNK-------ESKAVDHL 114 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l--~~---~~~~~~~~~~~~~~~~~d~~-------~~g~iDvl 114 (349)
.|+|+||||+|+||++++++|+++|++|++++|+.... .+ ....+.. ..+..+.+|.. ...++|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh--CCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 46799999999999999999999999999999985432 11 1112222 24667777732 23468999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEecccccc------CCCCchhhHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWL------PLPRMSLYASAKA 187 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~------~~~~~~~Y~asKa 187 (349)
||+||... +.+..++++++... + -+++|. |..+.. ..|....| .+|+
T Consensus 82 i~~a~~~~--------------------~~~~~~l~~aa~~~---g~v~~~v~--S~~g~~~~~~~~~~p~~~~y-~sK~ 135 (308)
T 1qyc_A 82 ISTVGSLQ--------------------IESQVNIIKAIKEV---GTVKRFFP--SEFGNDVDNVHAVEPAKSVF-EVKA 135 (308)
T ss_dssp EECCCGGG--------------------SGGGHHHHHHHHHH---CCCSEEEC--SCCSSCTTSCCCCTTHHHHH-HHHH
T ss_pred EECCcchh--------------------hhhHHHHHHHHHhc---CCCceEee--cccccCccccccCCcchhHH-HHHH
Confidence 99998531 23344455554322 2 357763 433321 12334678 9999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc----ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML----EDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+++.+.+.. + +.++.+.||++.+.+....... ..................++++|+|++++.++.++
T Consensus 136 ~~e~~~~~~----~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~ 206 (308)
T 1qyc_A 136 KVRRAIEAE----G--IPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP 206 (308)
T ss_dssp HHHHHHHHH----T--CCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred HHHHHHHhc----C--CCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCc
Confidence 998887642 2 6778888987755432211100 00000000011112234677899999999988764
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=5.5e-13 Score=121.34 Aligned_cols=104 Identities=14% Similarity=0.176 Sum_probs=76.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceee
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLV 115 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlV 115 (349)
.+++||+++||||+||||+++++.|+++|++|++++|+.++.+++.+++... ..+..+.+|. +....+|++|
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~DvlV 193 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVKGAHFVF 193 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence 3578999999999999999999999999999999999988887776655221 1123344442 2345689999
Q ss_pred ecCcCCCC-ccccccCCcchHHHHHHhHhhhhH
Q 039397 116 NTASLGHT-FFFEEVTDTSIFPRLLDINFWGNV 147 (349)
Q Consensus 116 nnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~ 147 (349)
||||+... .+..+.+..+.++.++++|+.+++
T Consensus 194 n~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 194 TAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp ECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred ECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 99986532 233333223667789999999988
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=5.7e-10 Score=103.26 Aligned_cols=148 Identities=15% Similarity=0.038 Sum_probs=102.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCc--chhhhHHHHhcCCC-C---eEEEEEeccccCCCccee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-------NLVLVARRE--NRLQGSTIDEYNPI-N---EVTLVSLNNKESKAVDHL 114 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~--~~l~~~~~~~~~~~-~---~~~~~~~d~~~~g~iDvl 114 (349)
.+|+||||+|.||.+++..|+++|+ +|+++++++ ++.+....++.+.. . ++.......+.....|++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D~V 84 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYA 84 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCCEE
Confidence 3699999999999999999999996 899999875 23333333443211 1 111111113445679999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc--------cc-CCCCchhhHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN--------WL-PLPRMSLYASA 185 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~--------~~-~~~~~~~Y~as 185 (349)
||.||..... .+.....+++|+.++..+++++..+- ..+++++++|+... .. +.+....|+.+
T Consensus 85 ih~Ag~~~~~-------~~~~~~~~~~Nv~~t~~l~~a~~~~~-~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~t 156 (327)
T 1y7t_A 85 LLVGAAPRKA-------GMERRDLLQVNGKIFTEQGRALAEVA-KKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMT 156 (327)
T ss_dssp EECCCCCCCT-------TCCHHHHHHHHHHHHHHHHHHHHHHS-CTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECC
T ss_pred EECCCcCCCC-------CCCHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccc
Confidence 9999976421 12336789999999999999887641 12357888877542 11 24455679999
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 039397 186 KAALVTFYESLRFELNDE 203 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~ 203 (349)
|...+.+.+.++..++-.
T Consensus 157 kl~~er~~~~~a~~~g~~ 174 (327)
T 1y7t_A 157 RLDHNRAKAQLAKKTGTG 174 (327)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHhCcC
Confidence 999999999998877644
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=6.7e-10 Score=96.46 Aligned_cols=178 Identities=15% Similarity=0.088 Sum_probs=98.1
Q ss_pred CCCCCEEEEeCC----------------CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---
Q 039397 44 NMEDKVVIITGA----------------SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--- 104 (349)
Q Consensus 44 ~l~~k~vlVTGa----------------s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--- 104 (349)
+|+||+|||||| |||||.++|++|+++|++|++++++.. ++. .. .+..+...
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~-------~~-g~~~~dv~~~~ 75 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT-------PP-FVKRVDVMTAL 75 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC-------CT-TEEEEECCSHH
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc-------CC-CCeEEccCcHH
Confidence 589999999999 699999999999999999999988652 211 11 12222221
Q ss_pred ------cccCCCcceeeecCcCCCCccccccCCcchHHHH--HHhHhhhhHHHHHHhccccccC--CCeE-EEEeccccc
Q 039397 105 ------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRL--LDINFWGNVYPTFVALPYLHES--NGRV-VVNASVENW 173 (349)
Q Consensus 105 ------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~--~~vN~~g~~~l~~~~lp~m~~~--~g~I-V~isS~~~~ 173 (349)
.+.++++|++|||||+....+... . .+.+.+. -+.|+.-.+..+.-+++.+.+. .+.+ |-+. +
T Consensus 76 ~~~~~v~~~~~~~Dili~~Aav~d~~p~~~-~-~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~VGFa---a- 149 (226)
T 1u7z_A 76 EMEAAVNASVQQQNIFIGCAAVADYRAATV-A-PEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFA---A- 149 (226)
T ss_dssp HHHHHHHHHGGGCSEEEECCBCCSEEESSC-C-SSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEE---E-
T ss_pred HHHHHHHHhcCCCCEEEECCcccCCCCccC-C-hHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEEEEcc---h-
Confidence 455789999999999876554422 2 2444441 1334333333334444444332 2333 2111 1
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCc-ccCCCCCCc----cccccchhhhhHHHHhhhcCCCCHH
Q 039397 174 LPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGW-IGIEMTKGK----FMLEDGAEMQWKEEREVHVAGGPVE 247 (349)
Q Consensus 174 ~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~-v~T~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~e 247 (349)
+. +.+.+..+.++..+ +.+.+.++-- .++.+.... ....++ .......+.+
T Consensus 150 --------Et------~~l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~---------~~~~~~~sK~ 206 (226)
T 1u7z_A 150 --------ET------NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDG---------DKVLPLERKE 206 (226)
T ss_dssp --------ES------SSHHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTE---------EEEEEEEEHH
T ss_pred --------hh------chHHHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCC---------cEecCCCCHH
Confidence 11 23555555666544 5555555533 233332211 111110 0112345789
Q ss_pred HHHHHHHHHHhc
Q 039397 248 DFARLIVSGACR 259 (349)
Q Consensus 248 dvA~~i~~l~~~ 259 (349)
++|+.|+..+.+
T Consensus 207 ~vA~~I~~~i~~ 218 (226)
T 1u7z_A 207 LLGQLLLDEIVT 218 (226)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999887753
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=3.2e-10 Score=108.79 Aligned_cols=45 Identities=16% Similarity=0.216 Sum_probs=39.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
..++.||+|+|||++ +||+++|+.|++.|++|+++++++.+.++.
T Consensus 260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A 304 (488)
T 3ond_A 260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA 304 (488)
T ss_dssp CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 346899999999997 999999999999999999999997765543
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.1e-08 Score=89.06 Aligned_cols=75 Identities=8% Similarity=0.198 Sum_probs=55.4
Q ss_pred CCCEEEEeCC----------------CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----
Q 039397 46 EDKVVIITGA----------------SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----- 104 (349)
Q Consensus 46 ~~k~vlVTGa----------------s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----- 104 (349)
+||+|||||| ||++|.++|++++++|++|++++|.... ... ....+..+...
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~~------~~~~~~~~~v~s~~em 74 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KPE------PHPNLSIREITNTKDL 74 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CCC------CCTTEEEEECCSHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-ccc------CCCCeEEEEHhHHHHH
Confidence 5899999999 8889999999999999999999997532 110 01123333333
Q ss_pred ----cccCCCcceeeecCcCCCCcccc
Q 039397 105 ----NKESKAVDHLVNTASLGHTFFFE 127 (349)
Q Consensus 105 ----~~~~g~iDvlVnnAg~~~~~~~~ 127 (349)
.+.++++|++|||||+....+..
T Consensus 75 ~~~v~~~~~~~Dili~aAAvsD~~p~~ 101 (232)
T 2gk4_A 75 LIEMQERVQDYQVLIHSMAVSDYTPVY 101 (232)
T ss_dssp HHHHHHHGGGCSEEEECSBCCSEEEEE
T ss_pred HHHHHHhcCCCCEEEEcCccccccchh
Confidence 34568899999999997665543
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=2e-09 Score=105.82 Aligned_cols=98 Identities=17% Similarity=0.207 Sum_probs=66.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccC--CCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKES--KAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~--g~iDvlVnnAg~~ 121 (349)
++++|+++|||| ||+|++++++|+++|++|++++|+.+++++++.++.. .+..+ .|.+.+ +.+|++|||+|+.
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~---~~~~~-~dl~~~~~~~~DilVN~agvg 435 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG---KALSL-TDLDNYHPEDGMVLANTTSMG 435 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC----CEET-TTTTTC--CCSEEEEECSSTT
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC---ceeeH-HHhhhccccCceEEEECCCCC
Confidence 477899999999 5999999999999999999999999888887766521 11111 133332 3489999999985
Q ss_pred CC-----ccccccCCcchHHHHHHhHhhhhH
Q 039397 122 HT-----FFFEEVTDTSIFPRLLDINFWGNV 147 (349)
Q Consensus 122 ~~-----~~~~~~~~~~~~~~~~~vN~~g~~ 147 (349)
.. .++.+. ..+.+..++++|+.+..
T Consensus 436 ~~~~~~~~~~~~~-~~~~~~~v~Dvny~p~~ 465 (523)
T 2o7s_A 436 MQPNVEETPISKD-ALKHYALVFDAVYTPRI 465 (523)
T ss_dssp CTTCTTCCSSCTT-TGGGEEEEEECCCSSSS
T ss_pred CCCCCCCCCCChH-HcCcCcEEEEEeeCCcc
Confidence 42 233333 34667888899988753
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.56 E-value=5.9e-08 Score=87.95 Aligned_cols=78 Identities=19% Similarity=0.355 Sum_probs=58.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCC--C-eEEEEEec-cccCCCcceeeecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPI--N-EVTLVSLN-NKESKAVDHLVNTAS 119 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~--~-~~~~~~~d-~~~~g~iDvlVnnAg 119 (349)
++++|+++|||++ |+|+++++.|+++| +|++++|+.++++++.+++.... . .......| .+..+++|++|||+|
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP 202 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCC
Confidence 5789999999997 99999999999999 99999999888877766552110 0 00111122 456789999999999
Q ss_pred CCCC
Q 039397 120 LGHT 123 (349)
Q Consensus 120 ~~~~ 123 (349)
....
T Consensus 203 ~~~~ 206 (287)
T 1nvt_A 203 IGMY 206 (287)
T ss_dssp TTCT
T ss_pred CCCC
Confidence 7643
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.53 E-value=1.5e-07 Score=84.60 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=58.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccC--CCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKES--KAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~--g~iDvlVnnAg~~ 121 (349)
++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++.... .+.. .|.+.. ++.|++|||+|..
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~~--~~~~~~~~~~~DivVn~t~~~ 191 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQA--LSMDELEGHEFDLIINATSSG 191 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEE--CCSGGGTTCCCSEEEECCSCG
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-CeeE--ecHHHhccCCCCEEEECCCCC
Confidence 578999999998 799999999999999999999999988887776653211 2222 222111 6899999999975
Q ss_pred C
Q 039397 122 H 122 (349)
Q Consensus 122 ~ 122 (349)
.
T Consensus 192 ~ 192 (271)
T 1nyt_A 192 I 192 (271)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.47 E-value=3.1e-07 Score=70.91 Aligned_cols=66 Identities=17% Similarity=0.164 Sum_probs=51.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeecC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNTA 118 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnnA 118 (349)
+++++|+|+ |++|+++++.|.++| ++|++++|++++++.... ..+..+..|. +...++|++|+++
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR------MGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT------TTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh------CCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 578999999 999999999999999 999999999887765441 1233445552 2345799999999
Q ss_pred c
Q 039397 119 S 119 (349)
Q Consensus 119 g 119 (349)
+
T Consensus 78 ~ 78 (118)
T 3ic5_A 78 P 78 (118)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.41 E-value=4.6e-07 Score=77.11 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=64.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------cc--cCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------NK--ESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~~--~~g~iDvlV 115 (349)
.|++++||||+||||.++++.+...|++|++++|++++++... +. +. .. .+... .+ ..+++|++|
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~--g~-~~-~~d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL--GV-EY-VGDSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TT--CC-SE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc--CC-CE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence 5899999999999999999999999999999999987765432 21 11 11 12211 11 124699999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
||+|. +. .+.+++.|+ .+|++|++++..
T Consensus 113 ~~~g~------------~~---------------~~~~~~~l~-~~G~~v~~g~~~ 140 (198)
T 1pqw_A 113 NSLAG------------EA---------------IQRGVQILA-PGGRFIELGKKD 140 (198)
T ss_dssp ECCCT------------HH---------------HHHHHHTEE-EEEEEEECSCGG
T ss_pred ECCch------------HH---------------HHHHHHHhc-cCCEEEEEcCCC
Confidence 99972 11 233444553 468999988754
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=1.1e-06 Score=78.95 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=57.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccC--CCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKES--KAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~--g~iDvlVnnAg~~ 121 (349)
++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++.... .+.. .+.++. +..|++||+++..
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~~~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSMDSIPLQTYDLVINATSAG 191 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEGGGCCCSCCSEEEECCCC-
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeHHHhccCCCCEEEECCCCC
Confidence 678999999998 799999999999999999999999998888877663211 2222 232222 5899999999875
Q ss_pred C
Q 039397 122 H 122 (349)
Q Consensus 122 ~ 122 (349)
.
T Consensus 192 ~ 192 (272)
T 1p77_A 192 L 192 (272)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.31 E-value=7.1e-07 Score=83.73 Aligned_cols=103 Identities=17% Similarity=0.099 Sum_probs=68.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----cccCCCcceeeecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----NKESKAVDHLVNTAS 119 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~iDvlVnnAg 119 (349)
.+++++++|+|+ |+||+++++.+...|++|++++|+.++++....... ..+.....+ .+...+.|++|+|+|
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g---~~~~~~~~~~~~l~~~~~~~DvVi~~~g 238 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG---GRVITLTATEANIKKSVQHADLLIGAVL 238 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT---TSEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC---ceEEEecCCHHHHHHHHhCCCEEEECCC
Confidence 578999999999 999999999999999999999999887766544331 122221111 122346899999998
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
..... .+..+.+..++.|+ .+|.||++++..
T Consensus 239 ~~~~~--------------------~~~li~~~~l~~mk-~gg~iV~v~~~~ 269 (369)
T 2eez_A 239 VPGAK--------------------APKLVTRDMLSLMK-EGAVIVDVAVDQ 269 (369)
T ss_dssp ---------------------------CCSCHHHHTTSC-TTCEEEECC---
T ss_pred CCccc--------------------cchhHHHHHHHhhc-CCCEEEEEecCC
Confidence 64210 01223456677774 568999998754
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.26 E-value=5.9e-06 Score=76.17 Aligned_cols=149 Identities=15% Similarity=0.047 Sum_probs=101.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecC----cchhhhHHHHhcCCC--CeEEE-EEec-cccCCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA-------NLVLVARR----ENRLQGSTIDEYNPI--NEVTL-VSLN-NKESKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~----~~~l~~~~~~~~~~~--~~~~~-~~~d-~~~~g~i 111 (349)
..+|+||||+|.+|..++..|+.+|. +|++++++ +++++....++.+.. ..... ...| .+.....
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 35799999999999999999999986 89999998 655665555554321 11111 1223 4456788
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc--------cc-CCCCchhh
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN--------WL-PLPRMSLY 182 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~--------~~-~~~~~~~Y 182 (349)
|++|+.||..... . ..-...++.|+.....+++.+..+- ..+++||++|.... .. +.|..-.|
T Consensus 85 D~Vi~~ag~~~~~------g-~~r~dl~~~N~~i~~~i~~~i~~~~-~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~ 156 (329)
T 1b8p_A 85 DVALLVGARPRGP------G-MERKDLLEANAQIFTVQGKAIDAVA-SRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFT 156 (329)
T ss_dssp SEEEECCCCCCCT------T-CCHHHHHHHHHHHHHHHHHHHHHHS-CTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEE
T ss_pred CEEEEeCCCCCCC------C-CCHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccCchHHHHHHHHHHcCCCCHHHEE
Confidence 9999999975321 1 2235678999999998888887652 02468888886432 12 34444557
Q ss_pred HHHHHHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE 203 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~ 203 (349)
+.++---..+...++..++-.
T Consensus 157 g~t~Ld~~r~~~~la~~lgv~ 177 (329)
T 1b8p_A 157 AMLRLDHNRALSQIAAKTGKP 177 (329)
T ss_dssp ECCHHHHHHHHHHHHHHHTCC
T ss_pred EeecHHHHHHHHHHHHHhCcC
Confidence 877766677778888887654
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.26 E-value=2e-06 Score=79.91 Aligned_cols=94 Identities=14% Similarity=0.138 Sum_probs=66.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEE-e---c------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVS-L---N------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~-~---d------~~~~g~iDvlV 115 (349)
.|++++||||+||||.++++.+...|++|++++|++++++... ++ +. +. .+. . + ....+++|++|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~--g~-~~-~~d~~~~~~~~~~~~~~~~~~~D~vi 243 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SI--GG-EV-FIDFTKEKDIVGAVLKATDGGAHGVI 243 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HT--TC-CE-EEETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-Hc--CC-ce-EEecCccHhHHHHHHHHhCCCCCEEE
Confidence 5899999999999999999999999999999999988775433 32 11 11 121 1 1 00113799999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
+|+|.. + ..+.+++.|+ .+|++|.+++..
T Consensus 244 ~~~g~~-----------~---------------~~~~~~~~l~-~~G~iv~~g~~~ 272 (347)
T 2hcy_A 244 NVSVSE-----------A---------------AIEASTRYVR-ANGTTVLVGMPA 272 (347)
T ss_dssp ECSSCH-----------H---------------HHHHHTTSEE-EEEEEEECCCCT
T ss_pred ECCCcH-----------H---------------HHHHHHHHHh-cCCEEEEEeCCC
Confidence 999831 1 3456666664 468999998754
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=1.9e-06 Score=79.50 Aligned_cols=95 Identities=8% Similarity=0.141 Sum_probs=65.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
.|++++||||+||||.++++.+...|++|++++|++++++.. .++. . .......+ ....+++|++||
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g--~-~~~~d~~~~~~~~~~~~~~~~~~~d~vi~ 220 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIG--F-DAAFNYKTVNSLEEALKKASPDGYDCYFD 220 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--C-SEEEETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcC--C-cEEEecCCHHHHHHHHHHHhCCCCeEEEE
Confidence 589999999999999999999999999999999998877665 3331 1 11111111 011257999999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN 172 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~ 172 (349)
|+|. +. .+.++..+ +.+|+++.+++..+
T Consensus 221 ~~g~------------~~---------------~~~~~~~l-~~~G~~v~~g~~~~ 248 (333)
T 1v3u_A 221 NVGG------------EF---------------LNTVLSQM-KDFGKIAICGAISV 248 (333)
T ss_dssp SSCH------------HH---------------HHHHHTTE-EEEEEEEECCCCC-
T ss_pred CCCh------------HH---------------HHHHHHHH-hcCCEEEEEecccc
Confidence 9982 10 22344444 35689999877654
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.18 E-value=1.2e-05 Score=73.31 Aligned_cols=111 Identities=16% Similarity=0.076 Sum_probs=78.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEec--CcchhhhHHHHhcC---CCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVAR--RENRLQGSTIDEYN---PINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r--~~~~l~~~~~~~~~---~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
+++||||+|.+|..++..|+.+|. +++++++ ++++++....++.+ ......+...+.+.....|++|+.||..
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~~ 81 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGIP 81 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCCC
Confidence 699999999999999999999885 7999999 77666554445422 1223333334566778899999999974
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
... -+.-...+..|+.+...+.+++..+ ..++.|+++|
T Consensus 82 ~~~-------g~~r~dl~~~N~~i~~~i~~~i~~~--~p~~~viv~S 119 (303)
T 1o6z_A 82 RQP-------GQTRIDLAGDNAPIMEDIQSSLDEH--NDDYISLTTS 119 (303)
T ss_dssp CCT-------TCCHHHHHHHHHHHHHHHHHHHHTT--CSCCEEEECC
T ss_pred CCC-------CCCHHHHHHHHHHHHHHHHHHHHHH--CCCcEEEEeC
Confidence 321 1223467899999999999888765 2234555443
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.15 E-value=7e-06 Score=73.50 Aligned_cols=76 Identities=16% Similarity=0.235 Sum_probs=59.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++.. ..+.....+.......|++||+....
T Consensus 116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~~~~l~~~~~DivInaTp~g 192 (272)
T 3pwz_A 116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISRYEALEGQSFDIVVNATSAS 192 (272)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEECSGGGTTCCCSEEEECSSGG
T ss_pred CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEeeHHHhcccCCCEEEECCCCC
Confidence 3678999999998 7999999999999996 999999999999888887754 23444433322126789999986543
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=3.7e-06 Score=76.85 Aligned_cols=78 Identities=15% Similarity=0.198 Sum_probs=57.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecC---cchhhhHHHHhcC-CCCeEEEEEecc-----ccCCCcc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARR---ENRLQGSTIDEYN-PINEVTLVSLNN-----KESKAVD 112 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~---~~~l~~~~~~~~~-~~~~~~~~~~d~-----~~~g~iD 112 (349)
.+++||+++|+|+ ||+|++++..|+++|+ +|++++|+ .++.+++++++.. .+..+..+..+. +.....|
T Consensus 150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 4688999999998 7999999999999999 89999999 7777777766632 222344443321 1234689
Q ss_pred eeeecCcCC
Q 039397 113 HLVNTASLG 121 (349)
Q Consensus 113 vlVnnAg~~ 121 (349)
++||+....
T Consensus 229 iIINaTp~G 237 (315)
T 3tnl_A 229 IFTNATGVG 237 (315)
T ss_dssp EEEECSSTT
T ss_pred EEEECccCC
Confidence 999986543
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.15 E-value=2e-06 Score=82.72 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=53.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcceeeec
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDHLVNT 117 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDvlVnn 117 (349)
|++|+|+||| +||+|+++++.|+++|++|++++|+.++.+++...+ .....+.+|. +...++|++|||
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~ 75 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVAKHDLVISL 75 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence 3578999998 799999999999999999999999987766544322 1244555552 223579999999
Q ss_pred CcCC
Q 039397 118 ASLG 121 (349)
Q Consensus 118 Ag~~ 121 (349)
++..
T Consensus 76 a~~~ 79 (450)
T 1ff9_A 76 IPYT 79 (450)
T ss_dssp CC--
T ss_pred Cccc
Confidence 9864
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=1.1e-05 Score=73.79 Aligned_cols=144 Identities=17% Similarity=0.112 Sum_probs=92.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEec--CcchhhhHHHHhc----CCCCeEEEEEec---cccCCCcceeeec
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVAR--RENRLQGSTIDEY----NPINEVTLVSLN---NKESKAVDHLVNT 117 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r--~~~~l~~~~~~~~----~~~~~~~~~~~d---~~~~g~iDvlVnn 117 (349)
+|+||||+|++|..++..|+.+|. +++++++ ++++++....++. ..+....+...+ .+.....|++|+.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~~ 81 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIIT 81 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEEC
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEEC
Confidence 689999999999999999999885 6889998 6655554333331 111223333333 5667889999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc--------cCCCCchhhHH-HHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW--------LPLPRMSLYAS-AKAA 188 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~--------~~~~~~~~Y~a-sKaa 188 (349)
||..... .+.-...++.|+.+...+++++..+- ++.|+++|..... .+.|..-.++. +.--
T Consensus 82 Ag~~~~~-------g~~r~dl~~~N~~i~~~i~~~i~~~~---~~~vlv~SNPv~~~t~~~~k~~~~p~~rviG~gt~LD 151 (313)
T 1hye_A 82 SGVPRKE-------GMSRMDLAKTNAKIVGKYAKKIAEIC---DTKIFVITNPVDVMTYKALVDSKFERNQVFGLGTHLD 151 (313)
T ss_dssp CSCCCCT-------TCCHHHHHHHHHHHHHHHHHHHHHHC---CCEEEECSSSHHHHHHHHHHHHCCCTTSEEECTTHHH
T ss_pred CCCCCCC-------CCcHHHHHHHHHHHHHHHHHHHHHhC---CeEEEEecCcHHHHHHHHHHhhCcChhcEEEeCccHH
Confidence 9974321 12235678999999999999887752 3344444432221 12344444555 4544
Q ss_pred HHHHHHHHHHHhcC
Q 039397 189 LVTFYESLRFELND 202 (349)
Q Consensus 189 l~~l~~~la~el~~ 202 (349)
...+-..++..++-
T Consensus 152 ~~r~~~~la~~lgv 165 (313)
T 1hye_A 152 SLRFKVAIAKFFGV 165 (313)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCc
Confidence 55666667776654
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.12 E-value=5e-06 Score=76.43 Aligned_cols=94 Identities=13% Similarity=0.089 Sum_probs=65.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe-c-------c--ccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL-N-------N--KESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-d-------~--~~~g~iDvlV 115 (349)
.|++++||||+||||.++++.+...|++|++++|++++++.... + +. +. .+.. + . ...+++|++|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~--g~-~~-~~~~~~~~~~~~~~~~~~~~~~D~vi 214 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A--GA-WQ-VINYREEDLVERLKEITGGKKVRVVY 214 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H--TC-SE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--CC-CE-EEECCCccHHHHHHHHhCCCCceEEE
Confidence 58999999999999999999999999999999999877665543 2 11 11 1221 1 1 1124699999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN 172 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~ 172 (349)
+|+|. +. .+.+++.+ +.+|+++.+++..+
T Consensus 215 ~~~g~------------~~---------------~~~~~~~l-~~~G~iv~~g~~~~ 243 (327)
T 1qor_A 215 DSVGR------------DT---------------WERSLDCL-QRRGLMVSFGNSSG 243 (327)
T ss_dssp ECSCG------------GG---------------HHHHHHTE-EEEEEEEECCCTTC
T ss_pred ECCch------------HH---------------HHHHHHHh-cCCCEEEEEecCCC
Confidence 99982 11 23334444 34689999987654
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=98.12 E-value=8.6e-06 Score=73.26 Aligned_cols=76 Identities=11% Similarity=0.136 Sum_probs=58.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++.... .+.....+... ...|++||+....
T Consensus 122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~~l~-~~aDiIInaTp~g 198 (281)
T 3o8q_A 122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFEQLK-QSYDVIINSTSAS 198 (281)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGCC-SCEEEEEECSCCC
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHHHhc-CCCCEEEEcCcCC
Confidence 3678999999998 7999999999999996 99999999999888887764322 24444333222 5789999987554
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=6.9e-06 Score=75.48 Aligned_cols=95 Identities=11% Similarity=0.066 Sum_probs=65.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
.|++++|+||+|+||...++.+...|++|+++++++++++... ++. .+..+...+ .....++|++|+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~G---a~~~~~~~~~~~~~~~~~~~~~~g~Dvvid 215 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALG---AWETIDYSHEDVAKRVLELTDGKKCPVVYD 215 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHT---CSEEEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---CCEEEeCCCccHHHHHHHHhCCCCceEEEE
Confidence 5899999999999999999999999999999999988877544 331 111111111 112247999999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN 172 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~ 172 (349)
|+|. + ..+.+++.+ +.+|+++.+++..+
T Consensus 216 ~~g~------------~---------------~~~~~~~~l-~~~G~iv~~g~~~~ 243 (325)
T 3jyn_A 216 GVGQ------------D---------------TWLTSLDSV-APRGLVVSFGNASG 243 (325)
T ss_dssp SSCG------------G---------------GHHHHHTTE-EEEEEEEECCCTTC
T ss_pred CCCh------------H---------------HHHHHHHHh-cCCCEEEEEecCCC
Confidence 9983 1 122334444 35689999987654
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=5.1e-06 Score=76.67 Aligned_cols=96 Identities=14% Similarity=0.133 Sum_probs=66.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------cccCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------NKESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~~~~g~iDvlVnn 117 (349)
.|++|+|+||+||||.++++.+...|++|++++|++++++.+..++. .+..+...+ ....+++|++|+|
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELG---FDGAIDYKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---CSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC---CCEEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence 58999999999999999999999999999999999888776534431 111111111 1113579999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN 172 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~ 172 (349)
+|. + ..+.+++.+ +.+|++|.+++..+
T Consensus 226 ~g~------------~---------------~~~~~~~~l-~~~G~iv~~G~~~~ 252 (336)
T 4b7c_A 226 VGG------------E---------------ILDTVLTRI-AFKARIVLCGAISQ 252 (336)
T ss_dssp SCH------------H---------------HHHHHHTTE-EEEEEEEECCCGGG
T ss_pred CCc------------c---------------hHHHHHHHH-hhCCEEEEEeeccc
Confidence 983 1 123334444 35689999877653
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.07 E-value=6.2e-06 Score=76.04 Aligned_cols=70 Identities=13% Similarity=0.107 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvlV 115 (349)
.|++++||||+||||.++++.+...|++|++++|++++++...+ +. . +. .+..+ ....+++|++|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g--~-~~-~~d~~~~~~~~~i~~~~~~~~~d~vi 219 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LG--C-HH-TINYSTQDFAEVVREITGGKGVDVVY 219 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT--C-SE-EEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--C-CE-EEECCCHHHHHHHHHHhCCCCCeEEE
Confidence 57999999999999999999999999999999999877765533 31 1 11 12211 11124799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+|+|.
T Consensus 220 ~~~g~ 224 (333)
T 1wly_A 220 DSIGK 224 (333)
T ss_dssp ECSCT
T ss_pred ECCcH
Confidence 99983
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=7.5e-06 Score=76.24 Aligned_cols=70 Identities=11% Similarity=0.113 Sum_probs=51.8
Q ss_pred CC--CEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcce
Q 039397 46 ED--KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDH 113 (349)
Q Consensus 46 ~~--k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDv 113 (349)
.| ++++||||+||||.++++.+...|+ +|+++++++++++.+..++ +. +. .+... ....+++|+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~--g~-~~-~~d~~~~~~~~~~~~~~~~~~d~ 233 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL--GF-DA-AINYKKDNVAEQLRESCPAGVDV 233 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS--CC-SE-EEETTTSCHHHHHHHHCTTCEEE
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc--CC-ce-EEecCchHHHHHHHHhcCCCCCE
Confidence 46 8999999999999999999999999 9999999987776554433 11 11 12211 011237999
Q ss_pred eeecCc
Q 039397 114 LVNTAS 119 (349)
Q Consensus 114 lVnnAg 119 (349)
+|+|+|
T Consensus 234 vi~~~G 239 (357)
T 2zb4_A 234 YFDNVG 239 (357)
T ss_dssp EEESCC
T ss_pred EEECCC
Confidence 999998
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=9.9e-06 Score=75.39 Aligned_cols=70 Identities=13% Similarity=0.058 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------c--ccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------N--KESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~--~~~g~iDvlV 115 (349)
.|++|+||||+||||.++++.+...|++|++++|++++++.+ .++. . +. .+..+ . ...+++|++|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g--~-~~-~~~~~~~~~~~~~~~~~~~~~~d~vi 236 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLG--A-AA-GFNYKKEDFSEATLKFTKGAGVNLIL 236 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT--C-SE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--C-cE-EEecCChHHHHHHHHHhcCCCceEEE
Confidence 589999999999999999999999999999999998877665 3331 1 11 12111 1 1124799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+|+|.
T Consensus 237 ~~~G~ 241 (354)
T 2j8z_A 237 DCIGG 241 (354)
T ss_dssp ESSCG
T ss_pred ECCCc
Confidence 99983
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.1e-05 Score=74.64 Aligned_cols=70 Identities=11% Similarity=0.101 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe----c------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL----N------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~----d------~~~~g~iDvlV 115 (349)
.|++++|+||+||||.++++.+...|++|++++|++++++.+..++ +. .. .+.. + ....+++|++|
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~--g~-~~-~~d~~~~~~~~~~~~~~~~~~~d~vi 230 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF--GF-DD-AFNYKEESDLTAALKRCFPNGIDIYF 230 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS--CC-SE-EEETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CC-ce-EEecCCHHHHHHHHHHHhCCCCcEEE
Confidence 5899999999999999999999999999999999988776554333 11 11 1111 1 00125799999
Q ss_pred ecCc
Q 039397 116 NTAS 119 (349)
Q Consensus 116 nnAg 119 (349)
+|+|
T Consensus 231 ~~~g 234 (345)
T 2j3h_A 231 ENVG 234 (345)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 9988
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.00 E-value=4.3e-06 Score=75.37 Aligned_cols=77 Identities=23% Similarity=0.257 Sum_probs=56.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCC--CCeEEEEEec-c-ccCCCcceeeecC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNP--INEVTLVSLN-N-KESKAVDHLVNTA 118 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d-~-~~~g~iDvlVnnA 118 (349)
++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++... ...+.....+ . +.....|++||+.
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence 688999999998 8999999999999999 7999999999988877766321 1123333211 1 2223579999986
Q ss_pred cCC
Q 039397 119 SLG 121 (349)
Q Consensus 119 g~~ 121 (349)
...
T Consensus 203 p~G 205 (283)
T 3jyo_A 203 PMG 205 (283)
T ss_dssp STT
T ss_pred CCC
Confidence 543
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.99 E-value=6.2e-06 Score=74.91 Aligned_cols=76 Identities=17% Similarity=0.260 Sum_probs=58.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++++..... .....+ .+.....|++||+.+.
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~--~~~~~~~~~~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS--AYFSLAEAETRLAEYDIIINTTSV 214 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC--CEECHHHHHHTGGGCSEEEECSCT
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC--ceeeHHHHHhhhccCCEEEECCCC
Confidence 578999999998 7999999999999998 999999999988887776532111 122212 2345678999999987
Q ss_pred CC
Q 039397 121 GH 122 (349)
Q Consensus 121 ~~ 122 (349)
..
T Consensus 215 ~~ 216 (297)
T 2egg_A 215 GM 216 (297)
T ss_dssp TC
T ss_pred CC
Confidence 53
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.98 E-value=1.2e-05 Score=74.85 Aligned_cols=69 Identities=13% Similarity=0.155 Sum_probs=51.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------c--ccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------N--KESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~--~~~g~iDvlV 115 (349)
.|++++||||+||||.++++.+...|++|++++|++++++.. .++ +. +. .+..+ . ...+++|++|
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~--ga-~~-~~d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN--GA-HE-VFNHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--TC-SE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc--CC-CE-EEeCCCchHHHHHHHHcCCCCcEEEE
Confidence 589999999999999999999999999999999998877643 232 11 11 12111 0 1123799999
Q ss_pred ecCc
Q 039397 116 NTAS 119 (349)
Q Consensus 116 nnAg 119 (349)
+|+|
T Consensus 245 ~~~G 248 (351)
T 1yb5_A 245 EMLA 248 (351)
T ss_dssp ESCH
T ss_pred ECCC
Confidence 9998
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.2e-05 Score=74.51 Aligned_cols=95 Identities=16% Similarity=0.183 Sum_probs=65.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cc-cC-CCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NK-ES-KAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~-~~-g~iDvlV 115 (349)
.|++++||||+||||..+++.+... |++|+++++++++++.+. ++. . +..+...+ .+ .. +++|++|
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g--~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi 245 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAG--A-DYVINASMQDPLAEIRRITESKGVDAVI 245 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHT--C-SEEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhC--C-CEEecCCCccHHHHHHHHhcCCCceEEE
Confidence 5799999999999999999999999 999999999988776553 331 1 11111111 11 11 5899999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
+|+|.. ...+.++..+ +.+|++|.++...
T Consensus 246 ~~~g~~--------------------------~~~~~~~~~l-~~~G~iv~~g~~~ 274 (347)
T 1jvb_A 246 DLNNSE--------------------------KTLSVYPKAL-AKQGKYVMVGLFG 274 (347)
T ss_dssp ESCCCH--------------------------HHHTTGGGGE-EEEEEEEECCSSC
T ss_pred ECCCCH--------------------------HHHHHHHHHH-hcCCEEEEECCCC
Confidence 999841 1133444445 3468999887654
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.96 E-value=7.6e-06 Score=77.67 Aligned_cols=73 Identities=16% Similarity=0.207 Sum_probs=56.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC---CeEEEEecCcchhhhHHHHhcC-CCCeEEEEEecccc-------CC--Cccee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK---ANLVLVARRENRLQGSTIDEYN-PINEVTLVSLNNKE-------SK--AVDHL 114 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G---~~Vv~~~r~~~~l~~~~~~~~~-~~~~~~~~~~d~~~-------~g--~iDvl 114 (349)
++|+|+|| ||||+++++.|+++| .+|++++|+.+++++..+++.. ....+..+.+|... .. ++|++
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 57999999 899999999999999 4999999999998888777632 22345666666321 11 48999
Q ss_pred eecCcCC
Q 039397 115 VNTASLG 121 (349)
Q Consensus 115 VnnAg~~ 121 (349)
|||+|..
T Consensus 81 in~ag~~ 87 (405)
T 4ina_A 81 LNIALPY 87 (405)
T ss_dssp EECSCGG
T ss_pred EECCCcc
Confidence 9999853
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=3.5e-05 Score=71.92 Aligned_cols=96 Identities=15% Similarity=0.159 Sum_probs=65.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc---chhhhHHHHhcCCCCeEEEEEec-----cccCCCcceee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE---NRLQGSTIDEYNPINEVTLVSLN-----NKESKAVDHLV 115 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~---~~l~~~~~~~~~~~~~~~~~~~d-----~~~~g~iDvlV 115 (349)
+++|++|+|+|| ||||..+++.+...|++|+++++++ ++++.+ .++. . +.. -..+ .+..+++|++|
T Consensus 178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~g--a-~~v-~~~~~~~~~~~~~~~~d~vi 251 (366)
T 2cdc_A 178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EETK--T-NYY-NSSNGYDKLKDSVGKFDVII 251 (366)
T ss_dssp SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHHT--C-EEE-ECTTCSHHHHHHHCCEEEEE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHhC--C-cee-chHHHHHHHHHhCCCCCEEE
Confidence 455999999999 9999999999999999999999998 666433 3331 1 111 1001 00115799999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHH-HHhccccccCCCeEEEEecccc
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT-FVALPYLHESNGRVVVNASVEN 172 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~-~~~lp~m~~~~g~IV~isS~~~ 172 (349)
+++|.. + .+ +.+++.|+ .+|+||+++...+
T Consensus 252 d~~g~~-----------~---------------~~~~~~~~~l~-~~G~iv~~g~~~~ 282 (366)
T 2cdc_A 252 DATGAD-----------V---------------NILGNVIPLLG-RNGVLGLFGFSTS 282 (366)
T ss_dssp ECCCCC-----------T---------------HHHHHHGGGEE-EEEEEEECSCCCS
T ss_pred ECCCCh-----------H---------------HHHHHHHHHHh-cCCEEEEEecCCC
Confidence 999852 1 22 55666664 4689999876543
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=8.1e-06 Score=65.07 Aligned_cols=70 Identities=13% Similarity=0.173 Sum_probs=49.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc------c--cCCCcceee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN------K--ESKAVDHLV 115 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~------~--~~g~iDvlV 115 (349)
++++++++|+|+ |++|..+++.|.+.|++|++++|++++.+.... .+ ...+..|. + ..++.|++|
T Consensus 3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~~--~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YA--THAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----TC--SEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hC--CEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 356788999998 999999999999999999999998776554322 11 12333441 1 245789999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
++++.
T Consensus 76 ~~~~~ 80 (144)
T 2hmt_A 76 VAIGA 80 (144)
T ss_dssp ECCCS
T ss_pred ECCCC
Confidence 98873
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1.4e-05 Score=72.92 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=56.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecC---cchhhhHHHHhcC-CCCeEEEEEecc-----ccCCCcc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARR---ENRLQGSTIDEYN-PINEVTLVSLNN-----KESKAVD 112 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~---~~~l~~~~~~~~~-~~~~~~~~~~d~-----~~~g~iD 112 (349)
.++++|+++|+|+ ||+|++++..|++.|+ +|++++|+ .++.+++++++.. .+..+.....+. +.....|
T Consensus 144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 4678999999998 8999999999999998 89999999 7777777666522 222333333322 1234579
Q ss_pred eeeecCcCC
Q 039397 113 HLVNTASLG 121 (349)
Q Consensus 113 vlVnnAg~~ 121 (349)
++||+-...
T Consensus 223 iIINaTp~G 231 (312)
T 3t4e_A 223 ILTNGTKVG 231 (312)
T ss_dssp EEEECSSTT
T ss_pred EEEECCcCC
Confidence 999986554
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=76.56 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=38.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
.|++|+|+||+||||.+.++.+...|++|+++++++++++.+
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~ 261 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV 261 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 589999999999999999999999999999999988877654
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.85 E-value=7.4e-05 Score=68.69 Aligned_cols=109 Identities=17% Similarity=-0.026 Sum_probs=73.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCC--eEEEEEe--cc-ccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPIN--EVTLVSL--NN-KESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~--~~~~~~~--d~-~~~g~iDvlVnnAg~ 120 (349)
.+|+||||+|.+|..++..|+++| .+|++++++++ +....++..... .+..+.. |. +.....|++|+.||.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 479999999999999999999999 89999998876 333334432211 3333222 32 446789999999996
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEE
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVN 167 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~i 167 (349)
..... +.-...+.+|+.+...+++++..+- .++.|+++
T Consensus 87 ~~~~g-------~~r~dl~~~N~~~~~~i~~~i~~~~--p~~~viv~ 124 (326)
T 1smk_A 87 PRKPG-------MTRDDLFKINAGIVKTLCEGIAKCC--PRAIVNLI 124 (326)
T ss_dssp CCCSS-------CCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEC
T ss_pred CCCCC-------CCHHHHHHHHHHHHHHHHHHHHhhC--CCeEEEEE
Confidence 43211 1113568899999988888887652 23444443
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.84 E-value=3.6e-05 Score=61.47 Aligned_cols=67 Identities=13% Similarity=0.178 Sum_probs=49.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc--------cCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK--------ESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~--------~~g~iDvlVnn 117 (349)
++++++|+|+ |.+|.++++.|.++|++|+++++++++.+..... ....+..|.. ...+.|++|.+
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 4578999998 7799999999999999999999998877655432 2344555521 23467888876
Q ss_pred Cc
Q 039397 118 AS 119 (349)
Q Consensus 118 Ag 119 (349)
.+
T Consensus 78 ~~ 79 (141)
T 3llv_A 78 GS 79 (141)
T ss_dssp CS
T ss_pred cC
Confidence 54
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=3.2e-05 Score=71.19 Aligned_cols=71 Identities=15% Similarity=0.199 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
.|++++|+||+||||.++++.+...|++|+++++++++++... ++ + .+..+...+ .....++|++++
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~--g-a~~~~~~~~~~~~~~~~~~~~~~g~D~vid 223 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EY--G-AEYLINASKEDILRQVLKFTNGKGVDASFD 223 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT--T-CSEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--C-CcEEEeCCCchHHHHHHHHhCCCCceEEEE
Confidence 5899999999999999999999999999999999988877433 33 1 122111111 111347999999
Q ss_pred cCcC
Q 039397 117 TASL 120 (349)
Q Consensus 117 nAg~ 120 (349)
|+|.
T Consensus 224 ~~g~ 227 (334)
T 3qwb_A 224 SVGK 227 (334)
T ss_dssp CCGG
T ss_pred CCCh
Confidence 9984
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.84 E-value=3.3e-05 Score=71.78 Aligned_cols=70 Identities=16% Similarity=0.166 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
.|++|+|+||+||||.++++.+...|++|+++++++++++.+.+ + +. +. .+..+ ....+++|++|+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l--Ga-~~-~~~~~~~~~~~~~~~~~~~g~Dvvid 241 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L--GA-KR-GINYRSEDFAAVIKAETGQGVDIILD 241 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H--TC-SE-EEETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c--CC-CE-EEeCCchHHHHHHHHHhCCCceEEEE
Confidence 58999999999999999999999999999999999988765543 3 11 11 12111 111457999999
Q ss_pred cCcC
Q 039397 117 TASL 120 (349)
Q Consensus 117 nAg~ 120 (349)
|+|.
T Consensus 242 ~~g~ 245 (353)
T 4dup_A 242 MIGA 245 (353)
T ss_dssp SCCG
T ss_pred CCCH
Confidence 9983
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.84 E-value=3.8e-05 Score=70.95 Aligned_cols=71 Identities=13% Similarity=0.107 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
.|++|+|+||+||||..+++.+...|++|+++++++++++.+.+ + +.+..+...+ .....++|++|+
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYVIDTSTAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEEEeCCcccHHHHHHHHhCCCCCcEEEE
Confidence 58999999999999999999999999999999999888765543 3 1111111111 112247999999
Q ss_pred cCcC
Q 039397 117 TASL 120 (349)
Q Consensus 117 nAg~ 120 (349)
|+|.
T Consensus 220 ~~g~ 223 (340)
T 3gms_A 220 SIGG 223 (340)
T ss_dssp SSCH
T ss_pred CCCC
Confidence 9984
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.81 E-value=1.2e-05 Score=77.55 Aligned_cols=74 Identities=15% Similarity=0.134 Sum_probs=53.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcce
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVDH 113 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iDv 113 (349)
..++++|+|+|+|| ||+|+++++.|++. |++|++++|+.++.+++... . .+..+..|. +...++|+
T Consensus 18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~----~~~~~~~D~~d~~~l~~~l~~~Dv 91 (467)
T 2axq_A 18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-S----GSKAISLDVTDDSALDKVLADNDV 91 (467)
T ss_dssp -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-G----TCEEEECCTTCHHHHHHHHHTSSE
T ss_pred ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-c----CCcEEEEecCCHHHHHHHHcCCCE
Confidence 34677899999997 99999999999998 78999999998887766543 1 123334441 22347899
Q ss_pred eeecCcCC
Q 039397 114 LVNTASLG 121 (349)
Q Consensus 114 lVnnAg~~ 121 (349)
+||+++..
T Consensus 92 VIn~tp~~ 99 (467)
T 2axq_A 92 VISLIPYT 99 (467)
T ss_dssp EEECSCGG
T ss_pred EEECCchh
Confidence 99999864
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=1.1e-05 Score=66.12 Aligned_cols=64 Identities=9% Similarity=-0.013 Sum_probs=46.5
Q ss_pred chHHHHHHHHHHHcCCeEEEEecCcchhhh---HHHHhcCCCCeEEEEEec----------------cccCCCcceeeec
Q 039397 57 SDIGEQIAYEYAKRKANLVLVARRENRLQG---STIDEYNPINEVTLVSLN----------------NKESKAVDHLVNT 117 (349)
Q Consensus 57 ~GIG~ala~~la~~G~~Vv~~~r~~~~l~~---~~~~~~~~~~~~~~~~~d----------------~~~~g~iDvlVnn 117 (349)
+-++.++++.|+++|++|++..|++++... ..+.+...+.....+++| .+.+|+ |+||||
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn 104 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC 104 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence 357899999999999999999997655432 233333334566666666 345788 999999
Q ss_pred CcCC
Q 039397 118 ASLG 121 (349)
Q Consensus 118 Ag~~ 121 (349)
||+.
T Consensus 105 Agg~ 108 (157)
T 3gxh_A 105 LANY 108 (157)
T ss_dssp SBSH
T ss_pred CCCC
Confidence 9974
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00013 Score=66.97 Aligned_cols=117 Identities=19% Similarity=0.187 Sum_probs=75.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCC---CeEEEEEeccccCCCcceeeecC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPI---NEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
+..+++|.|+|+ |++|..+|..|+..|. +|++.|+++++++..+.++.+.. ..+.....|.+.....|++|+.|
T Consensus 6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~a 84 (326)
T 3vku_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITA 84 (326)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECC
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECC
Confidence 345678999996 9999999999999997 89999999988887776664322 23444455677788899999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecc
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASV 170 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~ 170 (349)
|..... . +.-...++.|..-...+.+.+..+ ..++.++++|-.
T Consensus 85 g~~~kp------G-~tR~dL~~~N~~I~~~i~~~i~~~--~p~a~ilvvtNP 127 (326)
T 3vku_A 85 GAPQKP------G-ETRLDLVNKNLKILKSIVDPIVDS--GFNGIFLVAANP 127 (326)
T ss_dssp CCC-----------------------CHHHHHHHHHTT--TCCSEEEECSSS
T ss_pred CCCCCC------C-chHHHHHHHHHHHHHHHHHHHHhc--CCceEEEEccCc
Confidence 974221 0 112456777877666666666554 234677777643
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.77 E-value=4.7e-05 Score=70.36 Aligned_cols=69 Identities=17% Similarity=0.187 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------c--ccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------N--KESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~--~~~g~iDvlV 115 (349)
.|++++|+||+||+|..+++.+...|++|++++|++++++.+. ++. ... .+... . ...+++|++|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g--a~~--~~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALG--ADE--TVNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHT--CSE--EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcC--CCE--EEcCCcccHHHHHHHHhCCCCceEEE
Confidence 5789999999999999999999999999999999988776554 231 111 12211 0 1124799999
Q ss_pred ecCc
Q 039397 116 NTAS 119 (349)
Q Consensus 116 nnAg 119 (349)
+|+|
T Consensus 241 ~~~g 244 (343)
T 2eih_A 241 DHTG 244 (343)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 9998
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.75 E-value=6.9e-05 Score=69.27 Aligned_cols=72 Identities=17% Similarity=0.135 Sum_probs=51.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----c--ccCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----N--KESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----~--~~~g~iDvlVnnA 118 (349)
.|++|+|+||+||||..+++.+...|++|+++++++++++.+.+ + +...+.....+ . ....++|++|+|+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~--ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V--GADIVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H--TCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c--CCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 58999999999999999999999999999999999888765443 3 11122111111 1 1123699999999
Q ss_pred cC
Q 039397 119 SL 120 (349)
Q Consensus 119 g~ 120 (349)
|.
T Consensus 236 g~ 237 (342)
T 4eye_A 236 GG 237 (342)
T ss_dssp C-
T ss_pred ch
Confidence 84
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00026 Score=64.93 Aligned_cols=115 Identities=15% Similarity=0.109 Sum_probs=81.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCC----CCeEEEEEeccccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNP----INEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
+.+++.|+|+ |.+|..+|..|+..|. +|+++++++++++..+.++.+. ...+.....|.+.....|++|..||
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAG 82 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecc
Confidence 3568999996 9999999999999997 9999999998888766666322 1233444556677788999999999
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecc
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASV 170 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~ 170 (349)
..... . +.-...++.|..-...+.+.+..+ ..++.++++|-.
T Consensus 83 ~p~kp------G-~~R~dL~~~N~~Iv~~i~~~I~~~--~p~a~vlvvtNP 124 (326)
T 3pqe_A 83 ANQKP------G-ETRLELVEKNLKIFKGIVSEVMAS--GFDGIFLVATNP 124 (326)
T ss_dssp CCCCT------T-CCHHHHHHHHHHHHHHHHHHHHHT--TCCSEEEECSSS
T ss_pred cCCCC------C-ccHHHHHHHHHHHHHHHHHHHHHh--cCCeEEEEcCCh
Confidence 64211 1 223466788887777777766654 234677777643
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=7.6e-05 Score=69.67 Aligned_cols=70 Identities=10% Similarity=0.148 Sum_probs=51.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe-c----cccCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL-N----NKESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-d----~~~~g~iDvlVnnAg~ 120 (349)
.|++|+|+|+ |+||...++.+...|++|+++++++++++....++ +. +. .+.. + .+..+++|++|+++|.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l--Ga-~~-v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF--GA-DS-FLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS--CC-SE-EEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--CC-ce-EEeccCHHHHHHhhCCCCEEEECCCc
Confidence 6899999996 99999999999999999999999988776544333 11 11 1211 1 1223579999999985
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=3.4e-05 Score=72.47 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=68.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEE---ec-cccCCCcceeeecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVS---LN-NKESKAVDHLVNTAS 119 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~---~d-~~~~g~iDvlVnnAg 119 (349)
.+.|++++|+|+ |+||+++++.+...|++|++++|+.++++...+.... .+.... .+ .+.....|++|++++
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~---~~~~~~~~~~~l~~~l~~aDvVi~~~~ 240 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG---RIHTRYSSAYELEGAVKRADLVIGAVL 240 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT---SSEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC---eeEeccCCHHHHHHHHcCCCEEEECCC
Confidence 578999999998 9999999999999999999999998887765543311 111111 11 122346899999988
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecc
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASV 170 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~ 170 (349)
.... + +. ..+.+..++.|+ .++.||++++.
T Consensus 241 ~p~~----~-t~---------------~li~~~~l~~mk-~g~~iV~va~~ 270 (377)
T 2vhw_A 241 VPGA----K-AP---------------KLVSNSLVAHMK-PGAVLVDIAID 270 (377)
T ss_dssp CTTS----C-CC---------------CCBCHHHHTTSC-TTCEEEEGGGG
T ss_pred cCCC----C-Cc---------------ceecHHHHhcCC-CCcEEEEEecC
Confidence 6422 1 10 111344455664 56789988854
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00023 Score=66.62 Aligned_cols=69 Identities=17% Similarity=0.174 Sum_probs=48.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnnA 118 (349)
.|++|+|+||+|+||...++.+...|++|++++ ++++++.+ .++ +. +. .+..+ ..+.+++|++|+++
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l--Ga-~~-v~~~~~~~~~~~~~~~~g~D~vid~~ 256 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL--GA-DD-VIDYKSGSVEEQLKSLKPFDFILDNV 256 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT--TC-SE-EEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc--CC-CE-EEECCchHHHHHHhhcCCCCEEEECC
Confidence 589999999999999999999999999999988 44554433 333 11 11 12111 12235799999999
Q ss_pred cC
Q 039397 119 SL 120 (349)
Q Consensus 119 g~ 120 (349)
|.
T Consensus 257 g~ 258 (375)
T 2vn8_A 257 GG 258 (375)
T ss_dssp CT
T ss_pred CC
Confidence 83
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00039 Score=63.45 Aligned_cols=115 Identities=21% Similarity=0.154 Sum_probs=78.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecC--cchhhhHHHHhcC------CCCeEEEEEeccccCCCccee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARR--ENRLQGSTIDEYN------PINEVTLVSLNNKESKAVDHL 114 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~--~~~l~~~~~~~~~------~~~~~~~~~~d~~~~g~iDvl 114 (349)
.++.+++.|+|+ |.+|..+|..++..|. +|++.+++ +++.+....++.+ ....+. ...|.+.....|++
T Consensus 5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~-~t~d~~a~~~aDvV 82 (315)
T 3tl2_A 5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANII-GTSDYADTADSDVV 82 (315)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEE-EESCGGGGTTCSEE
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEE-EcCCHHHhCCCCEE
Confidence 345678999997 9999999999999999 99999999 5555544444421 111222 23456778889999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
|..||..... . +.-.+.++.|..-...+.+.+..+ ..++.++++|-
T Consensus 83 Iiaag~p~kp------g-~~R~dl~~~N~~i~~~i~~~i~~~--~p~a~vlvvsN 128 (315)
T 3tl2_A 83 VITAGIARKP------G-MSRDDLVATNSKIMKSITRDIAKH--SPNAIIVVLTN 128 (315)
T ss_dssp EECCSCCCCT------T-CCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEECCS
T ss_pred EEeCCCCCCC------C-CCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEECCC
Confidence 9999974321 1 122567788887766666666554 23467777764
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00023 Score=65.75 Aligned_cols=114 Identities=17% Similarity=0.106 Sum_probs=76.5
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcC---CCCeEEEEEec-cccCCCcceeeecC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYN---PINEVTLVSLN-NKESKAVDHLVNTA 118 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~---~~~~~~~~~~d-~~~~g~iDvlVnnA 118 (349)
|.+++|.|+|++|.+|..+|..++.+| .+|+++|+++++++..+.++.+ ....+. ...| .+.....|++|..|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-~t~d~~~al~dADvVvita 84 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-FTSDIKEALTDAKYIVSSG 84 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-EESCHHHHHTTEEEEEECC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-EcCCHHHHhCCCCEEEEcc
Confidence 456789999999999999999999999 4899999998887776655522 112233 2334 34467889999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCe-EEEEe
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGR-VVVNA 168 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~-IV~is 168 (349)
|..... . +.-...++.|..-...+.+.+..+- .++. |+++|
T Consensus 85 G~p~kp------G-~~R~dLl~~N~~I~~~i~~~i~~~~--p~a~~vlvvs 126 (343)
T 3fi9_A 85 GAPRKE------G-MTREDLLKGNAEIAAQLGKDIKSYC--PDCKHVIIIF 126 (343)
T ss_dssp C--------------CHHHHHHHHHHHHHHHHHHHHHHC--TTCCEEEECS
T ss_pred CCCCCC------C-CCHHHHHHHHHHHHHHHHHHHHHhc--cCcEEEEEec
Confidence 974211 1 2235667888877766666665542 3454 56665
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=8.9e-05 Score=69.11 Aligned_cols=69 Identities=14% Similarity=0.148 Sum_probs=51.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------c-ccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------N-KESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~-~~~g~iDvlVn 116 (349)
.|++|+|+||+||||..+++.+...|++|+++++++++++.+.+ + +. +. .+..+ . ...+++|++|+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~--Ga-~~-~~~~~~~~~~~~~~~~~~~g~D~vid 237 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L--GC-DR-PINYKTEPVGTVLKQEYPEGVDVVYE 237 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T--TC-SE-EEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c--CC-cE-EEecCChhHHHHHHHhcCCCCCEEEE
Confidence 58999999999999999999999999999999999877665432 2 11 11 12111 1 11247999999
Q ss_pred cCc
Q 039397 117 TAS 119 (349)
Q Consensus 117 nAg 119 (349)
|+|
T Consensus 238 ~~g 240 (362)
T 2c0c_A 238 SVG 240 (362)
T ss_dssp CSC
T ss_pred CCC
Confidence 998
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00017 Score=64.20 Aligned_cols=66 Identities=18% Similarity=0.160 Sum_probs=52.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
+|+++|.|+ ||.|++++..|++.|.+|++++|+.++.++++ ++. ...... ++....|++||+....
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~~~--~~l~~~DiVInaTp~G 183 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCFME--PPKSAFDLIINATSAS 183 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEESS--CCSSCCSEEEECCTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEecH--HHhccCCEEEEcccCC
Confidence 899999997 99999999999999999999999999988877 542 122222 2223789999986554
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00037 Score=63.94 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=83.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCC----CCeEEEEEeccccCCCcceeeec
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNP----INEVTLVSLNNKESKAVDHLVNT 117 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~~~d~~~~g~iDvlVnn 117 (349)
....+++.|+|+ |.+|.++|..|+.+|. +|++.|+++++++..+.++.+. .........|.+.....|++|..
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGGGTTEEEEEEC
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHHhCCCCEEEEc
Confidence 456788999998 9999999999999997 8999999998888777766322 12222334566778899999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
||..... . +.-.+.++.|..-...+.+.+..+ ..++.++++|-..
T Consensus 95 aG~~~kp---G----~tR~dL~~~N~~I~~~i~~~i~~~--~p~a~vlvvtNPv 139 (331)
T 4aj2_A 95 AGARQQE---G----ESRLNLVQRNVNIFKFIIPNVVKY--SPQCKLLIVSNPV 139 (331)
T ss_dssp CSCCCCT---T----CCGGGGHHHHHHHHHHHHHHHHHH--CTTCEEEECSSSH
T ss_pred cCCCCCC---C----ccHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEecChH
Confidence 9975321 1 112356777776666666666654 3457777776533
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00013 Score=67.23 Aligned_cols=113 Identities=19% Similarity=0.156 Sum_probs=75.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--e-----EEEEecCc--chhhhHHHHhcCCC-C---eEEEEEeccccCCCccee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--N-----LVLVARRE--NRLQGSTIDEYNPI-N---EVTLVSLNNKESKAVDHL 114 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~-----Vv~~~r~~--~~l~~~~~~~~~~~-~---~~~~~~~d~~~~g~iDvl 114 (349)
.+|+||||+|.||..++..|+..|. + ++++|+++ +.++..+.++.+.. . .+.....+.+.....|++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDvV 83 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVA 83 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCEE
Confidence 4799999999999999999999886 5 99999975 35666666663321 1 122222235667789999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCC-eEEEEec
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNG-RVVVNAS 169 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g-~IV~isS 169 (349)
|+.||..... . +.-...++.|......+.+++..+- .++ .++++|-
T Consensus 84 vitAg~prkp---G----~tR~dll~~N~~i~~~i~~~i~~~~--~~~~~vivvsN 130 (333)
T 5mdh_A 84 ILVGSMPRRD---G----MERKDLLKANVKIFKCQGAALDKYA--KKSVKVIVVGN 130 (333)
T ss_dssp EECCSCCCCT---T----CCTTTTHHHHHHHHHHHHHHHHHHS--CTTCEEEECSS
T ss_pred EEeCCCCCCC---C----CCHHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEcCC
Confidence 9999865321 1 1224567888888777777766542 235 4666654
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.54 E-value=6.6e-05 Score=70.05 Aligned_cols=74 Identities=18% Similarity=0.128 Sum_probs=55.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----cccCCCcceeeecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----NKESKAVDHLVNTAS 119 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~iDvlVnnAg 119 (349)
.+++++|+|+|+ ||+|+++++.+...|++|++++|+.++++.+...... .+..+..+ .+...+.|++||+++
T Consensus 164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~DvVI~~~~ 239 (361)
T 1pjc_A 164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVELLYSNSAEIETAVAEADLLIGAVL 239 (361)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeEeeeCCHHHHHHHHcCCCEEEECCC
Confidence 467899999999 9999999999999999999999999887766543321 11122111 123346899999998
Q ss_pred CC
Q 039397 120 LG 121 (349)
Q Consensus 120 ~~ 121 (349)
..
T Consensus 240 ~~ 241 (361)
T 1pjc_A 240 VP 241 (361)
T ss_dssp CT
T ss_pred cC
Confidence 64
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00019 Score=65.02 Aligned_cols=68 Identities=13% Similarity=0.142 Sum_probs=50.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----cccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----NKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----~~~~g~iDvlVnnAg 119 (349)
.|++++|+||+||+|..+++.+...|++|+++++++++++... ++ +... .+... .+..+++|++|+ +|
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~--ga~~--~~~~~~~~~~~~~~~~~d~vid-~g 197 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL--GAEE--AATYAEVPERAKAWGGLDLVLE-VR 197 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT--TCSE--EEEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc--CCCE--EEECCcchhHHHHhcCceEEEE-CC
Confidence 5889999999999999999999999999999999988876543 32 2221 22211 112267999999 87
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00044 Score=63.12 Aligned_cols=110 Identities=16% Similarity=0.056 Sum_probs=75.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCCC--eEEEEE--eccc-cCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPIN--EVTLVS--LNNK-ESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~~--~~~~~~--~d~~-~~g~iDvlVnnAg~~ 121 (349)
+|.|+||+|.+|..++..|+.+| .+|+++|+++ .+....++.+... ++.... .|.+ .....|++|+.||..
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~ 79 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcC
Confidence 58999999999999999999998 7999999987 3444445533322 233322 2544 477889999999975
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
.... . + -...++.|+.....+.+.+.++- .++.||++|-
T Consensus 80 ~~~g---~---~-r~dl~~~n~~i~~~i~~~i~~~~--p~a~viv~sN 118 (314)
T 1mld_A 80 RKPG---M---T-RDDLFNTNATIVATLTAACAQHC--PDAMICIISN 118 (314)
T ss_dssp CCTT---C---C-GGGGHHHHHHHHHHHHHHHHHHC--TTSEEEECSS
T ss_pred CCCC---C---c-HHHHHHHHHHHHHHHHHHHHhhC--CCeEEEEECC
Confidence 3221 1 1 12356788887777777766553 3467887643
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00063 Score=62.30 Aligned_cols=116 Identities=18% Similarity=0.098 Sum_probs=76.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcC------CCCeEEEEEeccccCCCcceeee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYN------PINEVTLVSLNNKESKAVDHLVN 116 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~~~~d~~~~g~iDvlVn 116 (349)
.|+.+++.|+|| |.+|.+++..|+..|. +|++.++++++++....++.+ ....+. ...|.+....-|++|.
T Consensus 4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~t~d~~a~~~aDiVIi 81 (324)
T 3gvi_A 4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT-GANDYAAIEGADVVIV 81 (324)
T ss_dssp --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE-EESSGGGGTTCSEEEE
T ss_pred CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE-EeCCHHHHCCCCEEEE
Confidence 355678999998 9999999999999998 999999999887655544421 112222 2356677788999999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecc
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASV 170 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~ 170 (349)
.||...... +.-...+..|..-...+.+.+..+ ..++.++++|-.
T Consensus 82 aag~p~k~G-------~~R~dl~~~N~~i~~~i~~~i~~~--~p~a~iivvtNP 126 (324)
T 3gvi_A 82 TAGVPRKPG-------MSRDDLLGINLKVMEQVGAGIKKY--APEAFVICITNP 126 (324)
T ss_dssp CCSCCCC------------CHHHHHHHHHHHHHHHHHHHH--CTTCEEEECCSS
T ss_pred ccCcCCCCC-------CCHHHHHHhhHHHHHHHHHHHHHH--CCCeEEEecCCC
Confidence 998743211 111345666776666666655544 234677777643
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0015 Score=59.79 Aligned_cols=115 Identities=18% Similarity=0.138 Sum_probs=79.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCC----CeEEEE-EeccccCCCcceeeecC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPI----NEVTLV-SLNNKESKAVDHLVNTA 118 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~----~~~~~~-~~d~~~~g~iDvlVnnA 118 (349)
|+.+++.|+|+ |.+|.++|..|+..|. +|++.++++++++....++.+.. ...... ..|.+.....|++|+.|
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTA 81 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcC
Confidence 34567889995 9999999999999998 99999999988776666664321 122222 35667778899999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
|..... . +.-.+.+..|..-...+.+.+..+- .++.++++|-
T Consensus 82 g~p~k~------G-~~R~dl~~~N~~i~~~i~~~i~~~~--p~a~vivvtN 123 (321)
T 3p7m_A 82 GVPRKP------G-MSRDDLLGINIKVMQTVGEGIKHNC--PNAFVICITN 123 (321)
T ss_dssp SCCCCT------T-CCHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEECCS
T ss_pred CcCCCC------C-CCHHHHHHHhHHHHHHHHHHHHHHC--CCcEEEEecC
Confidence 864321 1 1224567778777666666665542 3467777754
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00014 Score=65.28 Aligned_cols=70 Identities=11% Similarity=0.202 Sum_probs=53.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec-cccCCCcceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN-NKESKAVDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~~~g~iDvlVnnAg~ 120 (349)
.++++|+++|.|+ ||.|++++..|.+.|+ +|++++|+.++.+++++++. ....+ ..+. ..|++||+...
T Consensus 118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~-------~~~~~~l~~l-~~DivInaTp~ 188 (282)
T 3fbt_A 118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK-------VISYDELSNL-KGDVIINCTPK 188 (282)
T ss_dssp CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE-------EEEHHHHTTC-CCSEEEECSST
T ss_pred CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC-------cccHHHHHhc-cCCEEEECCcc
Confidence 3578999999997 6999999999999998 99999999988776654431 12222 2223 78999998754
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 189 G 189 (282)
T 3fbt_A 189 G 189 (282)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00083 Score=61.39 Aligned_cols=111 Identities=23% Similarity=0.244 Sum_probs=74.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCC---CeEEEEEeccccCCCcceeeecCcCCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPI---NEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
.+|.|+|+ |.+|..++..|+..|. +|++.|.++++++....++.+.. ....+...|.+.....|++|..+|...
T Consensus 8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 46888898 9999999999999997 99999999988887666664332 233333345667788999999998742
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
.. . ..-...+..|..-...+++.+.++ ..++.|+++|
T Consensus 87 k~------g-~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~viv~t 123 (318)
T 1y6j_A 87 KP------G-ETRLDLAKKNVMIAKEVTQNIMKY--YNHGVILVVS 123 (318)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEECS
T ss_pred CC------C-cCHHHHHHhhHHHHHHHHHHHHHh--CCCcEEEEec
Confidence 11 1 122456777877777777777665 2456666653
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00016 Score=66.89 Aligned_cols=69 Identities=10% Similarity=0.132 Sum_probs=50.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------c--cCCCcceeee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------K--ESKAVDHLVN 116 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------~--~~g~iDvlVn 116 (349)
+++++|+||+||||...++.+...|++|+++++++++++.+. ++. . +. .+..+. + ...++|++++
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~G--a-~~-~~~~~~~~~~~~v~~~~~~~g~D~vid 239 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIG--A-AH-VLNEKAPDFEATLREVMKAEQPRIFLD 239 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHT--C-SE-EEETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC--C-CE-EEECCcHHHHHHHHHHhcCCCCcEEEE
Confidence 489999999999999999999999999999999988876554 331 1 11 222110 0 1137999999
Q ss_pred cCcC
Q 039397 117 TASL 120 (349)
Q Consensus 117 nAg~ 120 (349)
|+|.
T Consensus 240 ~~g~ 243 (349)
T 3pi7_A 240 AVTG 243 (349)
T ss_dssp SSCH
T ss_pred CCCC
Confidence 9984
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=3.2e-05 Score=69.36 Aligned_cols=69 Identities=23% Similarity=0.377 Sum_probs=51.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++++.+ ......+ .+.....|++||+...
T Consensus 114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-------~~~~~~~~~~~~~~~aDiVInaTp~ 185 (277)
T 3don_A 114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-------INKINLSHAESHLDEFDIIINTTPA 185 (277)
T ss_dssp TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-------CEEECHHHHHHTGGGCSEEEECCC-
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-------cccccHhhHHHHhcCCCEEEECccC
Confidence 578999999997 7999999999999999 999999998887655432 1122222 1223467999998654
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00029 Score=65.17 Aligned_cols=94 Identities=16% Similarity=0.119 Sum_probs=63.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------cc--cCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------NK--ESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~~--~~g~iDvl 114 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++... ++. ... .+..+ .+ ...++|++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~G--a~~--~~~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVG--ADY--VINPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHT--CSE--EECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC--CCE--EECCCCcCHHHHHHHHcCCCCCCEE
Confidence 7899999999 9999999999999999 9999999987766543 331 111 11111 11 12369999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN 172 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~ 172 (349)
|+++|.. + ..+.+++.+ +.+|++|.+++..+
T Consensus 241 id~~g~~-----------~---------------~~~~~~~~l-~~~G~iv~~g~~~~ 271 (348)
T 2d8a_A 241 LEFSGAP-----------K---------------ALEQGLQAV-TPAGRVSLLGLYPG 271 (348)
T ss_dssp EECSCCH-----------H---------------HHHHHHHHE-EEEEEEEECCCCSS
T ss_pred EECCCCH-----------H---------------HHHHHHHHH-hcCCEEEEEccCCC
Confidence 9999831 1 123344444 34689999987544
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.43 E-value=8.5e-05 Score=59.59 Aligned_cols=69 Identities=12% Similarity=0.180 Sum_probs=52.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe-c-cccCCCcceeeecCcCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL-N-NKESKAVDHLVNTASLG 121 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-d-~~~~g~iDvlVnnAg~~ 121 (349)
+++++|.|+ |++|+.+++.|.+.|++|++++|+.++.++..++.. ...... + .+.....|++|++.+..
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-----~~~~~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-----YEYVLINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-----CEEEECSCHHHHHHTCSEEEECSCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-----CceEeecCHHHHhcCCCEEEEeCCCC
Confidence 889999996 999999999999999999999999988887766653 111122 2 22235689999987753
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00025 Score=65.58 Aligned_cols=72 Identities=14% Similarity=0.092 Sum_probs=51.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec------cccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN------NKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------~~~~g~iDvlVnnAg 119 (349)
.|++|+|+||+|++|...++.+...|++|+++++++++++.+.+ +. ...+.....| ....+++|++++++|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG--a~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MG--ADIVLNHKESLLNQFKTQGIELVDYVFCTFN 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HT--CSEEECTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC--CcEEEECCccHHHHHHHhCCCCccEEEECCC
Confidence 58999999999999999999999999999999999887765443 31 1111100001 112347999999987
Q ss_pred C
Q 039397 120 L 120 (349)
Q Consensus 120 ~ 120 (349)
.
T Consensus 227 ~ 227 (346)
T 3fbg_A 227 T 227 (346)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00054 Score=53.97 Aligned_cols=67 Identities=12% Similarity=0.257 Sum_probs=48.2
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------ccCCCcceeeecC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------KESKAVDHLVNTA 118 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------~~~g~iDvlVnnA 118 (349)
+++++|+|+ |.+|..+++.|.+.|++|++++|+++..+...... ....+..|. ....+.|++|.+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 357899987 99999999999999999999999987766554331 122333331 2245789999886
Q ss_pred c
Q 039397 119 S 119 (349)
Q Consensus 119 g 119 (349)
+
T Consensus 78 ~ 78 (140)
T 1lss_A 78 G 78 (140)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0012 Score=60.36 Aligned_cols=115 Identities=14% Similarity=0.183 Sum_probs=77.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcC----CCCeEEEEEeccccCCCcceeeecC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYN----PINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
++..+|.|+|| |.+|..++..|+.+| .+|++.|+++++++....++.+ ..........+.+.....|++|..+
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~a 82 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICA 82 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECC
Confidence 44568999999 999999999999998 4899999998777654444321 1122333334566778899999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
|..... . +.-...+..|..-...+++.+.++ ..++.|+++|-
T Consensus 83 g~~~~~------g-~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~viv~tN 124 (317)
T 3d0o_A 83 GAAQKP------G-ETRLDLVSKNLKIFKSIVGEVMAS--KFDGIFLVATN 124 (317)
T ss_dssp CCCCCT------T-CCHHHHHHHHHHHHHHHHHHHHHT--TCCSEEEECSS
T ss_pred CCCCCC------C-CcHHHHHHHHHHHHHHHHHHHHHh--CCCcEEEEecC
Confidence 874321 1 122355677776666666666555 34567777543
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00045 Score=63.75 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=49.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
.|++|||+||+|+||...++.+...|++|+++ +++++++.+ .++ +.+. +..+ .....++|++++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~--i~~~~~~~~~~~~~~~~~g~D~vid 222 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP--IDASREPEDYAAEHTAGQGFDLVYD 222 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE--EETTSCHHHHHHHHHTTSCEEEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE--eccCCCHHHHHHHHhcCCCceEEEE
Confidence 58999999999999999999999999999999 777776543 333 1222 2211 112247999999
Q ss_pred cCc
Q 039397 117 TAS 119 (349)
Q Consensus 117 nAg 119 (349)
|+|
T Consensus 223 ~~g 225 (343)
T 3gaz_A 223 TLG 225 (343)
T ss_dssp SSC
T ss_pred CCC
Confidence 998
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0012 Score=59.64 Aligned_cols=111 Identities=16% Similarity=0.073 Sum_probs=75.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcC----CCCeEEEE-EeccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYN----PINEVTLV-SLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~~-~~d~~~~g~iDvlVnnAg~~ 121 (349)
++.|+|+ |.+|.++|..|+..|. +|++.++++++++....++.+ ........ ..|.+....-|++|..||..
T Consensus 2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aDiVViaag~~ 80 (294)
T 1oju_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCCHHHhCCCCEEEECCCCC
Confidence 5889999 9999999999999998 999999999887644433311 11122222 34666777889999999974
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... . +.-.+.++.|..-...+.+.+..+ ..++.++++|-
T Consensus 81 ~kp------G-~~R~dl~~~N~~i~~~i~~~i~~~--~p~a~iivvsN 119 (294)
T 1oju_A 81 RKP------G-MTRLDLAHKNAGIIKDIAKKIVEN--APESKILVVTN 119 (294)
T ss_dssp CCS------S-CCHHHHHHHHHHHHHHHHHHHHTT--STTCEEEECSS
T ss_pred CCC------C-CcHHHHHHHHHHHHHHHHHHHHhh--CCCeEEEEeCC
Confidence 321 1 122456777876666666666554 23467777764
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00042 Score=56.21 Aligned_cols=46 Identities=22% Similarity=0.341 Sum_probs=37.7
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
.|+.+..+++++|.|+ |.+|..+++.|.+.|++|++++|++++.+.
T Consensus 12 ~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp -----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred hhhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 4677888999999996 999999999999999999999999877654
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00069 Score=62.99 Aligned_cols=70 Identities=16% Similarity=0.228 Sum_probs=53.7
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
.+++||+++|.|+ |.+|..+|+.|.+.|++|++.+++.+++++..++.. ...+..+.......|+++.+|
T Consensus 169 ~~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g-----a~~v~~~~ll~~~~DIvip~a 238 (364)
T 1leh_A 169 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG-----ADAVAPNAIYGVTCDIFAPCA 238 (364)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC-----CEECCGGGTTTCCCSEEEECS
T ss_pred cCCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC-----CEEEChHHHhccCCcEeeccc
Confidence 3799999999997 889999999999999999999999888877666541 122222222223789999876
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00044 Score=63.67 Aligned_cols=69 Identities=19% Similarity=0.159 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe---c-----cccCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL---N-----NKESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~---d-----~~~~g~iDvlVnn 117 (349)
.|++|+|+|| ||+|..+++.+...|++|++++|++++++.+. ++ +.. ..+.. | .+..+++|++|++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l--Ga~--~~~d~~~~~~~~~~~~~~~~~d~vid~ 237 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL--GAD--LVVNPLKEDAAKFMKEKVGGVHAAVVT 237 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT--TCS--EEECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC--CCC--EEecCCCccHHHHHHHHhCCCCEEEEC
Confidence 5789999999 88999999999999999999999988876543 22 111 11111 1 0111579999999
Q ss_pred CcC
Q 039397 118 ASL 120 (349)
Q Consensus 118 Ag~ 120 (349)
+|.
T Consensus 238 ~g~ 240 (339)
T 1rjw_A 238 AVS 240 (339)
T ss_dssp SCC
T ss_pred CCC
Confidence 984
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0008 Score=64.62 Aligned_cols=43 Identities=21% Similarity=0.173 Sum_probs=38.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
.|++|+|+||+|++|...++.+...|++|+++++++++++.+.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~ 270 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR 270 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 5899999999999999999999999999999999888776543
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0026 Score=60.97 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=53.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-ccCCC-cceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-KESKA-VDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-~~~g~-iDvlVnnAg~ 120 (349)
+++++|+++|.|. |+.|.++|+.|.++|++|.+.|++........+.+...+..+. ...+. +.... .|.+|.+.|+
T Consensus 5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~-~g~~~~~~~~~~~d~vv~spgi 82 (451)
T 3lk7_A 5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV-CGSHPLELLDEDFCYMIKNPGI 82 (451)
T ss_dssp CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE-ESCCCGGGGGSCEEEEEECTTS
T ss_pred hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE-ECCChHHhhcCCCCEEEECCcC
Confidence 4688999999999 8899999999999999999999976432222233322222221 11112 22234 8999999998
Q ss_pred CC
Q 039397 121 GH 122 (349)
Q Consensus 121 ~~ 122 (349)
..
T Consensus 83 ~~ 84 (451)
T 3lk7_A 83 PY 84 (451)
T ss_dssp CT
T ss_pred CC
Confidence 53
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0013 Score=53.11 Aligned_cols=70 Identities=7% Similarity=0.132 Sum_probs=48.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEecc--------ccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLNN--------KESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d~--------~~~g~iDvlVn 116 (349)
.++.++|.|+ |.+|+.+++.|.++|++|++++++. ++.+....... ....++..|. ....+.|.+|.
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc---CCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 4567889986 9999999999999999999999984 44444433322 1244555551 12456777777
Q ss_pred cCc
Q 039397 117 TAS 119 (349)
Q Consensus 117 nAg 119 (349)
+.+
T Consensus 78 ~~~ 80 (153)
T 1id1_A 78 LSD 80 (153)
T ss_dssp CSS
T ss_pred ecC
Confidence 554
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0026 Score=57.66 Aligned_cols=110 Identities=19% Similarity=0.095 Sum_probs=69.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCC---CeEEEEEeccccCCCcceeeecCcCCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPI---NEVTLVSLNNKESKAVDHLVNTASLGHT 123 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~iDvlVnnAg~~~~ 123 (349)
+|.|.|| |.+|..++..|+..|+ +|++.++++++++....++.+.. ........|.+.....|++|..+|....
T Consensus 2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~~~ 80 (304)
T 2v6b_A 2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGANQK 80 (304)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC-----
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCCCC
Confidence 6889998 9999999999999999 99999999887776555553221 1222222456667789999999986432
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
.. +.-...+..|+.-...+.+.+.++ ..++.++++|
T Consensus 81 ~g-------~~r~dl~~~n~~i~~~i~~~i~~~--~p~~~vi~~t 116 (304)
T 2v6b_A 81 PG-------ESRLDLLEKNADIFRELVPQITRA--APDAVLLVTS 116 (304)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHH--CSSSEEEECS
T ss_pred CC-------CcHHHHHHhHHHHHHHHHHHHHHh--CCCeEEEEec
Confidence 11 111234566666666666666554 2345666543
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0028 Score=57.96 Aligned_cols=115 Identities=13% Similarity=0.059 Sum_probs=77.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCC----CCeEEEEEeccccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNP----INEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
..+++.|+|+ |.+|..+|..++..|. +|++.|+++++++..+.++.+. .........|.+.....|++|..||
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVSAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSCSSCSEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHhCCCCEEEEeCC
Confidence 4578999999 9999999999999997 9999999988877766555221 1122233456677889999999999
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecc
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASV 170 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~ 170 (349)
...... .+. .+.+..|..-...+.+.+..+ ..++.++++|-.
T Consensus 99 ~p~kpG---~tR----~dll~~N~~I~k~i~~~I~k~--~P~a~ilvvtNP 140 (330)
T 3ldh_A 99 ARQQEG---ESR----LNLVQRNVNIFKFIIPNIVKH--SPDCLKELHPEL 140 (330)
T ss_dssp CCCCSS---CCT----TGGGHHHHHHHHHHHHHHHHH--CTTCEEEECSSS
T ss_pred CCCCCC---CCH----HHHHHhhHHHHHHHHHHHHhh--CCCceEEeCCCc
Confidence 753221 111 234555655555555555544 235677777643
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0035 Score=57.01 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=77.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHc-C--CeEEEEecCcchhhhHHHHhcCCCCeEEEEE----eccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKR-K--ANLVLVARRENRLQGSTIDEYNPINEVTLVS----LNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~-G--~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~----~d~~~~g~iDvlVnnAg~~ 121 (349)
+|.|+||+|.+|..++..|+.+ + .+++++++++ +.+....++.+......... .+.+.+...|++|..||..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 5889999999999999999986 5 5899999987 55555666654433333322 2456678899999999974
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... . +.-.+.++.|..-...+.+.+..+ ..++.++++|-
T Consensus 81 rkp------G-~~R~dll~~N~~I~~~i~~~i~~~--~p~a~vlvvtN 119 (312)
T 3hhp_A 81 RKP------G-MDRSDLFNVNAGIVKNLVQQVAKT--CPKACIGIITN 119 (312)
T ss_dssp CCT------T-CCHHHHHHHHHHHHHHHHHHHHHH--CTTSEEEECSS
T ss_pred CCC------C-CCHHHHHHHHHHHHHHHHHHHHHH--CCCcEEEEecC
Confidence 321 1 223677888888777777777655 23567777754
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0009 Score=61.18 Aligned_cols=69 Identities=16% Similarity=0.101 Sum_probs=48.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEE-Ee-----ccccCCCcceeeecCcC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLV-SL-----NNKESKAVDHLVNTASL 120 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~-~~-----d~~~~g~iDvlVnnAg~ 120 (349)
+|+|+||+||+|...++.+...|++|+++++++++++.+. ++ +...+... .. .....+++|++|+++|.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l--Ga~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL--GAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT--TCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc--CCcEEEecCCcHHHHHHHhcCCcccEEEECCcH
Confidence 7999999999999999999999999999999987776543 22 11111100 00 01112479999999883
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0037 Score=57.27 Aligned_cols=113 Identities=20% Similarity=0.196 Sum_probs=77.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCC---CeEEEEEeccccCCCcceeeecCcCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPI---NEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
..+|.|+|| |.+|..++..|+..|. +|++.|+++++++....++.+.. ....+...+.+.....|++|..+|..
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 357999999 9999999999999886 89999999888877666663321 23333344566677899999999874
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... - +.-...+..|..-...+.+.+..+ ..++.|+++|-
T Consensus 88 ~k~------g-~~R~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~tN 126 (326)
T 2zqz_A 88 QKP------G-ETRLDLVNKNLKILKSIVDPIVDS--GFNGIFLVAAN 126 (326)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHH--TCCSEEEECSS
T ss_pred CCC------C-CCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 321 1 112345666766666666655544 24577887744
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00055 Score=61.20 Aligned_cols=71 Identities=21% Similarity=0.356 Sum_probs=53.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-cccCCCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-NKESKAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~~~g~iDvlVnnAg~~ 121 (349)
++++++++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.++. .+.... + .+.....|++|++....
T Consensus 126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~-----g~~~~~-~~~~~~~~aDiVi~atp~~ 197 (275)
T 2hk9_A 126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF-----PLEVVN-SPEEVIDKVQVIVNTTSVG 197 (275)
T ss_dssp TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS-----CEEECS-CGGGTGGGCSEEEECSSTT
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc-----CCeeeh-hHHhhhcCCCEEEEeCCCC
Confidence 577899999996 79999999999999999999999987766554332 122221 2 23345689999988754
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00088 Score=61.32 Aligned_cols=66 Identities=18% Similarity=0.172 Sum_probs=47.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe-cc-------ccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL-NN-------KESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-d~-------~~~g~iDvlVnnAg 119 (349)
+|+|+||+|++|...++.+...|++|+++++++++++.+. ++. ...+ +.. +. ...+++|++|+++|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lG--a~~v--~~~~~~~~~~~~~~~~~~~d~vid~~g 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLG--ASEV--ISREDVYDGTLKALSKQQWQGAVDPVG 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHT--CSEE--EEHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC--CcEE--EECCCchHHHHHHhhcCCccEEEECCc
Confidence 7999999999999999999999999999999988766543 331 1111 111 10 11246899999887
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0015 Score=59.49 Aligned_cols=68 Identities=19% Similarity=0.130 Sum_probs=48.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----cccCCCcceeeecCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----NKESKAVDHLVNTAS 119 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----~~~~g~iDvlVnnAg 119 (349)
|+ |+|+||+|++|...++.+...|++|+++++++++++.+.+ + +. +..+-..+ ....+++|+++.++|
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l--Ga-~~vi~~~~~~~~~~~~~~~~d~v~d~~g 220 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L--GA-NRILSRDEFAESRPLEKQLWAGAIDTVG 220 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H--TC-SEEEEGGGSSCCCSSCCCCEEEEEESSC
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c--CC-CEEEecCCHHHHHhhcCCCccEEEECCC
Confidence 46 9999999999999999999999999999999888765543 3 11 11111111 112356888888776
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0019 Score=59.87 Aligned_cols=70 Identities=20% Similarity=0.107 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCcchhhhHHHHhcCCCCeEEEEEe------c-------cccCCCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKAN-LVLVARRENRLQGSTIDEYNPINEVTLVSL------N-------NKESKAV 111 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~------d-------~~~~g~i 111 (349)
.|++|||+|+ |++|...++.....|++ |+++++++++++.+.+ +. . .+..... | .....++
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l~--~-~~~~~~~~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-IC--P-EVVTHKVERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-HC--T-TCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hc--h-hcccccccccchHHHHHHHHHHhCCCCC
Confidence 5789999998 99999999988889997 9999999888775443 31 1 1222221 1 1123479
Q ss_pred ceeeecCcC
Q 039397 112 DHLVNTASL 120 (349)
Q Consensus 112 DvlVnnAg~ 120 (349)
|++++++|.
T Consensus 254 Dvvid~~g~ 262 (363)
T 3m6i_A 254 AVALECTGV 262 (363)
T ss_dssp SEEEECSCC
T ss_pred CEEEECCCC
Confidence 999999883
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00066 Score=64.21 Aligned_cols=71 Identities=21% Similarity=0.320 Sum_probs=53.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEe-c-cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSL-N-NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-d-~~~~g~iDvlVnnAg~ 120 (349)
++.|++++|.|+ |++|+.+++.+...|+ +|++++|+.++.++.+.++. .. .+.. + .+.....|++|++.|.
T Consensus 164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g---~~--~~~~~~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GE--AVRFDELVDHLARSDVVVSATAA 237 (404)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CE--ECCGGGHHHHHHTCSEEEECCSS
T ss_pred cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Cc--eecHHhHHHHhcCCCEEEEccCC
Confidence 478999999998 9999999999999999 99999999888766665542 11 1111 1 1223468999999764
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0022 Score=59.72 Aligned_cols=71 Identities=8% Similarity=0.077 Sum_probs=49.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEE---ec------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVS---LN------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~---~d------~~~~g~iDvlV 115 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +...+.... .+ ....+++|++|
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l--Ga~~vi~~~~~~~~~~~~~~~~~~~g~D~vi 267 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF--GATDFVNPNDHSEPISQVLSKMTNGGVDFSL 267 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT--TCCEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh--CCceEEeccccchhHHHHHHHHhCCCCCEEE
Confidence 5789999996 9999999999888999 8999999988876543 32 111111000 01 01124799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+++|.
T Consensus 268 d~~g~ 272 (374)
T 1cdo_A 268 ECVGN 272 (374)
T ss_dssp ECSCC
T ss_pred ECCCC
Confidence 99884
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.003 Score=58.77 Aligned_cols=71 Identities=11% Similarity=0.078 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEE---ec------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVS---LN------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~---~d------~~~~g~iDvlV 115 (349)
.|++|||+|+ |++|...++.+...|+ +|+++++++++++.+. ++. ...+.... .+ ....+++|++|
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lG--a~~vi~~~~~~~~~~~~v~~~~~~g~D~vi 265 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFG--ATECINPQDFSKPIQEVLIEMTDGGVDYSF 265 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHT--CSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcC--CceEeccccccccHHHHHHHHhCCCCCEEE
Confidence 5789999996 9999999998888999 8999999988876543 331 11111000 01 01124799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+++|.
T Consensus 266 d~~g~ 270 (373)
T 2fzw_A 266 ECIGN 270 (373)
T ss_dssp ECSCC
T ss_pred ECCCc
Confidence 99884
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0056 Score=56.38 Aligned_cols=106 Identities=17% Similarity=0.126 Sum_probs=70.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCcc--hhhhHHHHhcC---CCCeEEEEEec-cccCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-------NLVLVARREN--RLQGSTIDEYN---PINEVTLVSLN-NKESK 109 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~~--~l~~~~~~~~~---~~~~~~~~~~d-~~~~g 109 (349)
..++.-+|.||||+|+||..++..|+.... ++++.|.++. .++..+.|+.+ ..........| .+.+.
T Consensus 20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~ 99 (345)
T 4h7p_A 20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFD 99 (345)
T ss_dssp --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTT
T ss_pred CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhC
Confidence 456667899999999999999999998643 7999998763 34555555522 22222223333 45577
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcc
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 155 (349)
..|++|..||..... . +.-++.++.|..=.-.+.+.+..
T Consensus 100 ~advVvi~aG~prkp------G-mtR~DLl~~Na~I~~~~~~~i~~ 138 (345)
T 4h7p_A 100 GVAIAIMCGAFPRKA------G-MERKDLLEMNARIFKEQGEAIAA 138 (345)
T ss_dssp TCSEEEECCCCCCCT------T-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCC------C-CCHHHHHHHhHHHHHHHHHHHHh
Confidence 899999999985321 1 22357788888766666665544
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0062 Score=55.33 Aligned_cols=111 Identities=19% Similarity=0.105 Sum_probs=77.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCCC---CeEEEEEeccccCCCcceeeecCcCCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNPI---NEVTLVSLNNKESKAVDHLVNTASLGHT 123 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~iDvlVnnAg~~~~ 123 (349)
+|.|+|| |.+|..++..|+..| .+|++.|+++++++..+.++.+.. ....+...+.+.....|++|..+|....
T Consensus 2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 6889998 999999999999988 689999999888887666664321 2333333567778899999999987432
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
. - ..-...+..|..-...+.+.+..+ ..++.|+++|-
T Consensus 81 ~------g-~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~tN 117 (310)
T 2xxj_A 81 P------G-ETRLQLLDRNAQVFAQVVPRVLEA--APEAVLLVATN 117 (310)
T ss_dssp T------T-CCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEECSS
T ss_pred C------C-cCHHHHHHhhHHHHHHHHHHHHHH--CCCcEEEEecC
Confidence 1 1 112345666766666666655544 24577777644
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0029 Score=57.77 Aligned_cols=112 Identities=19% Similarity=0.178 Sum_probs=73.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCC---CCeEEEEEeccccCCCcceeeecCcCCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNP---INEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~---~~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
.+|.|+|| |.+|..++..|+..|. +|++.|+++++++....++.+. .....+...+.+.....|++|..+|...
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~ 84 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ 84 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence 47999999 9999999999999886 8999999988888766665322 1233333445677888999999998743
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... +.-...+..|..-...+.+.+..+ ..++.|+++|-
T Consensus 85 ~~g-------~~R~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~tN 122 (318)
T 1ez4_A 85 KPG-------ESRLDLVNKNLNILSSIVKPVVDS--GFDGIFLVAAN 122 (318)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHT--TCCSEEEECSS
T ss_pred CCC-------CCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 211 111234566666555555555544 24577877644
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.001 Score=59.22 Aligned_cols=45 Identities=22% Similarity=0.264 Sum_probs=40.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
.-+++||+++|.|+|+-+|+.+|+.|.++|++|.++.|+...+++
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~ 199 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL 199 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence 347899999999999999999999999999999999987766554
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0013 Score=54.66 Aligned_cols=69 Identities=19% Similarity=0.160 Sum_probs=49.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------c--cCCCcce
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------K--ESKAVDH 113 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~--~~g~iDv 113 (349)
++.+++++|.|+ |.+|..+++.|.+. |++|+++++++++.+..... + ...+..|. + ...+.|+
T Consensus 36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~----g--~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE----G--RNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT----T--CCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC----C--CCEEEcCCCCHHHHHhccCCCCCCE
Confidence 466778889985 99999999999999 99999999998877654421 1 22233331 1 2456788
Q ss_pred eeecCc
Q 039397 114 LVNTAS 119 (349)
Q Consensus 114 lVnnAg 119 (349)
+|.+.+
T Consensus 109 vi~~~~ 114 (183)
T 3c85_A 109 VLLAMP 114 (183)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 887654
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.01 Score=53.30 Aligned_cols=111 Identities=15% Similarity=0.050 Sum_probs=77.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcC----CCCeEE-EEEeccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYN----PINEVT-LVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~----~~~~~~-~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
+|.|+|| |+||..+|..|+.+|. ++++.|.+++..+..+.|+.+ ...... ....|.+....-|++|..||..
T Consensus 2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 4778895 9999999999999884 899999998887777767632 111222 2344677788899999999975
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... . ..-++.++.|..=.-.+.+.+..+ ..++.++.+|-
T Consensus 81 rkp------G-mtR~dLl~~Na~I~~~i~~~i~~~--~p~aivlvvsN 119 (294)
T 2x0j_A 81 RKP------G-MTRLDLAHKNAGIIKDIAKKIVEN--APESKILVVTN 119 (294)
T ss_dssp CCS------S-SCHHHHHHHHHHHHHHHHHHHHTT--STTCEEEECSS
T ss_pred CCC------C-CchHHHHHHHHHHHHHHHHHHHhc--CCceEEEEecC
Confidence 422 1 223677888988777777777655 23456666554
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0042 Score=56.54 Aligned_cols=112 Identities=19% Similarity=0.134 Sum_probs=75.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCC----CCeEEEE-EeccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNP----INEVTLV-SLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~-~~d~~~~g~iDvlVnnAg~~ 121 (349)
++.|+|+ |.+|..+|..|+..|. +|++.++++++++..+.++.+. ....... ..|.+.....|++|..||..
T Consensus 2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 5788997 9999999999999997 9999999998877655555221 1122222 24577788899999999974
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecc
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASV 170 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~ 170 (349)
... . +.-...++.|..-...+.+.+..+ ..++.++++|-.
T Consensus 81 ~kp------G-~~R~dl~~~N~~i~~~i~~~i~~~--~p~a~vivvtNP 120 (314)
T 3nep_X 81 RSP------G-MSRDDLLAKNTEIVGGVTEQFVEG--SPDSTIIVVANP 120 (314)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHTT--CTTCEEEECCSS
T ss_pred CCC------C-CCHHHHHHhhHHHHHHHHHHHHHh--CCCcEEEecCCc
Confidence 321 1 112466778877766666666654 234677777643
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0018 Score=60.02 Aligned_cols=69 Identities=19% Similarity=0.121 Sum_probs=50.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc------ccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN------KESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~------~~~g~iDvlVnnAg 119 (349)
.|++|+|+|+ |++|...++.+...|++|+++++++++++.+.. +. ... .+.... ...+++|++|+++|
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lG--a~~--v~~~~~~~~~~~~~~~~~D~vid~~g 252 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MG--ADH--YIATLEEGDWGEKYFDTFDLIVVCAS 252 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HT--CSE--EEEGGGTSCHHHHSCSCEEEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cC--CCE--EEcCcCchHHHHHhhcCCCEEEECCC
Confidence 5889999999 999999999888899999999999888765443 31 111 122111 11158999999998
Q ss_pred C
Q 039397 120 L 120 (349)
Q Consensus 120 ~ 120 (349)
.
T Consensus 253 ~ 253 (360)
T 1piw_A 253 S 253 (360)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0076 Score=54.68 Aligned_cols=109 Identities=23% Similarity=0.160 Sum_probs=70.9
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCC------CCeEEEEEeccccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNP------INEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~------~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
++|.|+|| |.+|..++..|+..|. +|++.|+++++++....++.+. ..++. ...|.+.....|++|..+|.
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~-~t~d~~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVT-GTNNYADTANSDVIVVTSGA 80 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE-EESCGGGGTTCSEEEECCCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEE-ECCCHHHHCCCCEEEEcCCC
Confidence 47999999 9999999999999996 9999999998887666565332 12222 22566677889999999987
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEE
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVN 167 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~i 167 (349)
..... ..-...+..|..-...+.+.+.++- .++.++++
T Consensus 81 p~~~g-------~~r~dl~~~n~~i~~~i~~~i~~~~--p~a~vi~~ 118 (309)
T 1ur5_A 81 PRKPG-------MSREDLIKVNADITRACISQAAPLS--PNAVIIMV 118 (309)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHGGGC--TTCEEEEC
T ss_pred CCCCC-------CCHHHHHHHHHHHHHHHHHHHHhhC--CCeEEEEc
Confidence 43211 1112345666665556666655542 23445554
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.013 Score=53.24 Aligned_cols=110 Identities=24% Similarity=0.215 Sum_probs=75.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCcchhhhHHHHhcCC------CCeEEEEEeccccCCCcceeeecCcC
Q 039397 49 VVIITGASSDIGEQIAYEYAKR--KANLVLVARRENRLQGSTIDEYNP------INEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~~~l~~~~~~~~~~------~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
++.|.|+ |.+|..+|..|++. |++|++.++++++++....++.+. ...+. ...|.+.....|++|.+++.
T Consensus 2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~-~t~d~~~l~~aDvViiav~~ 79 (310)
T 1guz_A 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVT-GSNDYADTANSDIVIITAGL 79 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEE-EESCGGGGTTCSEEEECCSC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEE-ECCCHHHHCCCCEEEEeCCC
Confidence 5788998 99999999999995 799999999998877655444221 11222 22455567889999999985
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... +. ..-...++.|..-...+.+.+.++. .++.+++++-
T Consensus 80 p~~------~g-~~r~dl~~~n~~i~~~i~~~i~~~~--~~~~viv~tN 119 (310)
T 1guz_A 80 PRK------PG-MTREDLLMKNAGIVKEVTDNIMKHS--KNPIIIVVSN 119 (310)
T ss_dssp CCC------TT-CCHHHHHHHHHHHHHHHHHHHHHHC--SSCEEEECCS
T ss_pred CCC------CC-CCHHHHHHHHHHHHHHHHHHHHHhC--CCcEEEEEcC
Confidence 321 11 1234667777777777777776662 4567777643
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0039 Score=58.08 Aligned_cols=71 Identities=8% Similarity=0.054 Sum_probs=49.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEE---ec------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVS---LN------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~---~d------~~~~g~iDvlV 115 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +...+.... .| ....+++|++|
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l--Ga~~vi~~~~~~~~~~~~v~~~~~~g~Dvvi 270 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL--GATDCLNPRELDKPVQDVITELTAGGVDYSL 270 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT--TCSEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh--CCcEEEccccccchHHHHHHHHhCCCccEEE
Confidence 5789999996 9999999998888999 8999999988876543 32 111111000 01 01124799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+++|.
T Consensus 271 d~~G~ 275 (376)
T 1e3i_A 271 DCAGT 275 (376)
T ss_dssp ESSCC
T ss_pred ECCCC
Confidence 99884
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00052 Score=60.58 Aligned_cols=68 Identities=21% Similarity=0.351 Sum_probs=50.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
++++ +++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++. . ...+ .+.....|++||+...
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~-----~--~~~~~~~~~~~~aDiVInatp~ 176 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK-----I--FSLDQLDEVVKKAKSLFNTTSV 176 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE-----E--EEGGGHHHHHHTCSEEEECSST
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc-----c--CCHHHHHhhhcCCCEEEECCCC
Confidence 5678 8999997 8999999999999998 99999999887766544321 1 1222 1223467999997644
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0029 Score=59.11 Aligned_cols=69 Identities=13% Similarity=0.074 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEe-----c------cccCCCcce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSL-----N------NKESKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-----d------~~~~g~iDv 113 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +.+. .+.. | ....+++|+
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~~-vi~~~~~~~~~~~~i~~~~~gg~D~ 266 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-KF---GVNE-FVNPKDHDKPIQEVIVDLTDGGVDY 266 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-TT---TCCE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCcE-EEccccCchhHHHHHHHhcCCCCCE
Confidence 5789999998 9999999999889999 8999999998877432 22 1111 1211 1 112347999
Q ss_pred eeecCcC
Q 039397 114 LVNTASL 120 (349)
Q Consensus 114 lVnnAg~ 120 (349)
+|.++|.
T Consensus 267 vid~~g~ 273 (378)
T 3uko_A 267 SFECIGN 273 (378)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9999884
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0028 Score=58.44 Aligned_cols=68 Identities=16% Similarity=0.227 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-CCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-SKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~g~iDvlVnnAg~ 120 (349)
.|++|+|+|+ |++|...++.+...|++|+++++++++++.+. ++ +...+. .+.+. ..++|++++++|.
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l--Ga~~v~---~~~~~~~~~~D~vid~~g~ 244 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SM--GVKHFY---TDPKQCKEELDFIISTIPT 244 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HT--TCSEEE---SSGGGCCSCEEEEEECCCS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hc--CCCeec---CCHHHHhcCCCEEEECCCc
Confidence 5889999997 99999999999899999999999998877543 32 222222 33222 1279999999884
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0011 Score=58.24 Aligned_cols=75 Identities=19% Similarity=0.187 Sum_probs=52.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc-------------------chhhhHHHHhc--CCCCeEEEE
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE-------------------NRLQGSTIDEY--NPINEVTLV 101 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~-------------------~~l~~~~~~~~--~~~~~~~~~ 101 (349)
++++++|+|.|+ ||+|..+++.|++.|. ++.+++++. .+.+.+++.+. +....+..+
T Consensus 28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 467889999997 7999999999999997 899999987 55555555442 233344444
Q ss_pred Eecc------ccCCCcceeeecCc
Q 039397 102 SLNN------KESKAVDHLVNTAS 119 (349)
Q Consensus 102 ~~d~------~~~g~iDvlVnnAg 119 (349)
..+. +.....|++|++..
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d 130 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTD 130 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCS
T ss_pred eccCCHhHHHHHHhCCCEEEEeCC
Confidence 3221 12346798887653
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0016 Score=60.41 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=34.0
Q ss_pred CC-CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 46 ED-KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 46 ~~-k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
.| ++|+|+||+|++|...++.+...|++|+++.++.++
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 47 899999999999999998888899999999887665
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0032 Score=58.48 Aligned_cols=68 Identities=10% Similarity=0.134 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvlV 115 (349)
.|++|+|+| +|++|...++.+...|++|+++++++++++.+. ++. ...+ +..+ .....++|+++
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lG--a~~v--i~~~~~~~~~~v~~~~~g~g~D~vi 262 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-ALG--ADHG--INRLEEDWVERVYALTGDRGADHIL 262 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHT--CSEE--EETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-HcC--CCEE--EcCCcccHHHHHHHHhCCCCceEEE
Confidence 588999999 899999999999999999999999988777543 331 1111 2221 11123799999
Q ss_pred ecCc
Q 039397 116 NTAS 119 (349)
Q Consensus 116 nnAg 119 (349)
+++|
T Consensus 263 d~~g 266 (363)
T 3uog_A 263 EIAG 266 (363)
T ss_dssp EETT
T ss_pred ECCC
Confidence 9998
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0015 Score=60.67 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHH-cCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec------cccCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAK-RKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN------NKESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~-~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------~~~~g~iDvlVnnA 118 (349)
.|++|+|+||+|++|...++.+.. .|++|+++++++++++.+. ++ +...+.....| ....+++|+++.++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l--Gad~vi~~~~~~~~~v~~~~~~g~Dvvid~~ 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL--GAHHVIDHSKPLAAEVAALGLGAPAFVFSTT 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT--TCSEEECTTSCHHHHHHTTCSCCEEEEEECS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc--CCCEEEeCCCCHHHHHHHhcCCCceEEEECC
Confidence 588999999999999988876665 5899999999988776543 22 11111100001 11235799999988
Q ss_pred cC
Q 039397 119 SL 120 (349)
Q Consensus 119 g~ 120 (349)
|.
T Consensus 248 g~ 249 (363)
T 4dvj_A 248 HT 249 (363)
T ss_dssp CH
T ss_pred Cc
Confidence 73
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0021 Score=56.92 Aligned_cols=69 Identities=16% Similarity=0.210 Sum_probs=53.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
+++| +++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.++... . .....+. ...|++|++....
T Consensus 114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~---~---~~~~~~~-~~~Divi~~tp~~ 182 (263)
T 2d5c_A 114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGL---R---AVPLEKA-REARLLVNATRVG 182 (263)
T ss_dssp CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTC---E---ECCGGGG-GGCSEEEECSSTT
T ss_pred CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcc---c---hhhHhhc-cCCCEEEEccCCC
Confidence 6788 9999997 7799999999999999999999998887776655421 1 1111223 6789999988754
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0049 Score=57.36 Aligned_cols=71 Identities=14% Similarity=0.129 Sum_probs=48.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEE---ec------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVS---LN------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~---~d------~~~~g~iDvlV 115 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +...+.... .| ....+++|++|
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l--Ga~~vi~~~~~~~~~~~~i~~~t~gg~Dvvi 266 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL--GATECLNPKDYDKPIYEVICEKTNGGVDYAV 266 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT--TCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc--CCcEEEecccccchHHHHHHHHhCCCCCEEE
Confidence 5789999996 9999999998888999 8999999988776543 32 111111000 01 01124799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+++|.
T Consensus 267 d~~g~ 271 (373)
T 1p0f_A 267 ECAGR 271 (373)
T ss_dssp ECSCC
T ss_pred ECCCC
Confidence 99874
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0073 Score=55.02 Aligned_cols=75 Identities=17% Similarity=0.294 Sum_probs=55.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcC----CCCeEEEEEeccccCCCcceeeecCcC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYN----PINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
.++|.|+|+ |.+|..++..++..|. +|++.|+++++++....++.+ ..........+.+.....|++|..+|.
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~ 84 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGA 84 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSC
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCC
Confidence 468999999 9999999999999884 899999998766655444421 111333334456677889999999987
Q ss_pred CC
Q 039397 121 GH 122 (349)
Q Consensus 121 ~~ 122 (349)
..
T Consensus 85 ~~ 86 (316)
T 1ldn_A 85 NQ 86 (316)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0029 Score=58.56 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=32.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
.|++|+|+||+|++|...++.+...|++|+++.++.+
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP 203 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 5899999999999999999888889999988876644
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0021 Score=59.10 Aligned_cols=68 Identities=19% Similarity=0.167 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------cccCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------NKESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~~~~g~iDvlVnn 117 (349)
.|++++|+|+ |++|...++.+...|++|+++++++++++.+. ++ +. +. .+... .+..|++|+++.+
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l--Ga-~~-~i~~~~~~~~~~~~~~~g~~d~vid~ 239 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RL--GA-EV-AVNARDTDPAAWLQKEIGGAHGVLVT 239 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT--TC-SE-EEETTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-Hc--CC-CE-EEeCCCcCHHHHHHHhCCCCCEEEEe
Confidence 5889999997 89999999999999999999999988877543 22 11 11 12111 1123578999998
Q ss_pred Cc
Q 039397 118 AS 119 (349)
Q Consensus 118 Ag 119 (349)
+|
T Consensus 240 ~g 241 (340)
T 3s2e_A 240 AV 241 (340)
T ss_dssp SC
T ss_pred CC
Confidence 87
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.003 Score=50.09 Aligned_cols=69 Identities=14% Similarity=0.188 Sum_probs=47.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc--------cCCCccee
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK--------ESKAVDHL 114 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~--------~~g~iDvl 114 (349)
.++++ .++|.|+ |.+|..+++.|.++|++|+++++++++.+..... ....+..|.. ...+.|.+
T Consensus 4 ~~~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~------g~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 4 VDICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRER------GVRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred ccCCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc------CCCEEECCCCCHHHHHhcCcccCCEE
Confidence 34544 5777787 8899999999999999999999999887765431 2344555521 12356777
Q ss_pred eecCc
Q 039397 115 VNTAS 119 (349)
Q Consensus 115 VnnAg 119 (349)
|.+.+
T Consensus 76 i~~~~ 80 (140)
T 3fwz_A 76 ILTIP 80 (140)
T ss_dssp EECCS
T ss_pred EEECC
Confidence 66543
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0048 Score=56.96 Aligned_cols=71 Identities=17% Similarity=0.146 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEE--ec-----cc--c---CCCcce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVS--LN-----NK--E---SKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~--~d-----~~--~---~g~iDv 113 (349)
.|++|+|+|+ |++|...++.+...|++|+++++++++++.+. ++ +...+.... .+ .+ . .+++|+
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l--Ga~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~ 243 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC--GADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT--TCSEEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh--CCCEEEcCcccccHHHHHHHHhccccCCCCCE
Confidence 5789999997 89999999988889999999999988776543 32 111111111 11 01 1 246999
Q ss_pred eeecCcC
Q 039397 114 LVNTASL 120 (349)
Q Consensus 114 lVnnAg~ 120 (349)
+|+++|.
T Consensus 244 vid~~g~ 250 (352)
T 1e3j_A 244 TIDCSGN 250 (352)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9999883
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0028 Score=58.69 Aligned_cols=71 Identities=8% Similarity=0.125 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----cccCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----NKESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~iDvlVnnAg~ 120 (349)
.|++|+|+|+ |++|...++.+...|++|+++++++++++....++ +...+ +...+ .+..+++|++++++|.
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l--Ga~~v-i~~~~~~~~~~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL--GADDY-VIGSDQAKMSELADSLDYVIDTVPV 254 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS--CCSCE-EETTCHHHHHHSTTTEEEEEECCCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc--CCcee-eccccHHHHHHhcCCCCEEEECCCC
Confidence 6899999995 99999999988889999999999988766544232 11111 11111 1223579999999984
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.003 Score=56.24 Aligned_cols=45 Identities=18% Similarity=0.258 Sum_probs=39.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
-+++||.++|.|+|+-+|+.+|..|..+|++|.++.++...+++.
T Consensus 157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~ 201 (286)
T 4a5o_A 157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADH 201 (286)
T ss_dssp CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHH
Confidence 478999999999999899999999999999999998876655543
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0048 Score=57.47 Aligned_cols=70 Identities=6% Similarity=0.002 Sum_probs=49.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlV 115 (349)
-.|++|+|+||+|++|...++.+...|++|+.+. ++++++ ...++ +. +. .+... ....+++|+++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l--Ga-~~-vi~~~~~~~~~~v~~~t~g~~d~v~ 236 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR--GA-EE-VFDYRAPNLAQTIRTYTKNNLRYAL 236 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT--TC-SE-EEETTSTTHHHHHHHHTTTCCCEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc--CC-cE-EEECCCchHHHHHHHHccCCccEEE
Confidence 4689999999999999999999999999999886 555555 33333 11 11 22211 11235699999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
.++|.
T Consensus 237 d~~g~ 241 (371)
T 3gqv_A 237 DCITN 241 (371)
T ss_dssp ESSCS
T ss_pred ECCCc
Confidence 99884
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.018 Score=53.44 Aligned_cols=115 Identities=17% Similarity=0.099 Sum_probs=75.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--e---EEEEecCc----chhhhHHHHhcCCC----CeEEEEEeccccCCCcce
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA--N---LVLVARRE----NRLQGSTIDEYNPI----NEVTLVSLNNKESKAVDH 113 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~--~---Vv~~~r~~----~~l~~~~~~~~~~~----~~~~~~~~d~~~~g~iDv 113 (349)
..+|.||||+|.||.+++..++..+. . |++.+.+. ++++..+.|+.+.. ..+.....|.+.+...|+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daDv 111 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW 111 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCCE
Confidence 45799999999999999999999874 2 77766544 34566666664433 133333345777888999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
+|..||..... . +.-.+.++.|..-.-...+.+..+. ..++.|+++|-
T Consensus 112 VVitag~prkp------G-~tR~DLl~~N~~I~k~i~~~i~~~a-~p~~ivlVvsN 159 (375)
T 7mdh_A 112 ALLIGAKPRGP------G-MERAALLDINGQIFADQGKALNAVA-SKNVKVLVVGN 159 (375)
T ss_dssp EEECCCCCCCT------T-CCHHHHHHHHHHHHHHHHHHHHHHS-CTTCEEEECSS
T ss_pred EEEcCCCCCCC------C-CCHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEecC
Confidence 99999874311 1 2235677888766555555554431 12466666654
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0057 Score=56.91 Aligned_cols=69 Identities=19% Similarity=0.188 Sum_probs=50.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe---c--cccCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL---N--NKESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~---d--~~~~g~iDvlVnnAg~ 120 (349)
.|++|+|+|+ |++|...++.+...|++|+++++++++++.+. ++. ... .+.. | .+..+++|++|+++|.
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lG--a~~--vi~~~~~~~~~~~~~g~Dvvid~~g~ 267 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALG--ADE--VVNSRNADEMAAHLKSFDFILNTVAA 267 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHT--CSE--EEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC--CcE--EeccccHHHHHHhhcCCCEEEECCCC
Confidence 5889999998 89999999988889999999999988877544 331 111 1211 1 1112579999999985
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.003 Score=56.29 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=38.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
-+++||.++|.|+|+-+|+.+|+.|..+|++|.++.|+...+++
T Consensus 157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~ 200 (285)
T 3l07_A 157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS 200 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence 47899999999999989999999999999999999887655543
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0034 Score=56.32 Aligned_cols=43 Identities=21% Similarity=0.276 Sum_probs=38.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhh
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~ 85 (349)
-+++||.++|.|+|+-+|+.+|+.|.++|++|.++.|+...++
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~ 203 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED 203 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 4789999999999999999999999999999999998665554
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0041 Score=56.20 Aligned_cols=73 Identities=22% Similarity=0.177 Sum_probs=53.7
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEE-ec-cccCCCcceeeecC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVS-LN-NKESKAVDHLVNTA 118 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~-~d-~~~~g~iDvlVnnA 118 (349)
...++.||+++|.|+ |+||+++++.+...|++|++.+|+.++.+.... . + ...+. .+ .+.....|++|++.
T Consensus 151 ~~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~---g--~~~~~~~~l~~~l~~aDvVi~~~ 223 (300)
T 2rir_A 151 TDYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-M---G--LVPFHTDELKEHVKDIDICINTI 223 (300)
T ss_dssp CSSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---T--CEEEEGGGHHHHSTTCSEEEECC
T ss_pred cCCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-C---C--CeEEchhhHHHHhhCCCEEEECC
Confidence 345789999999996 999999999999999999999999876554322 1 1 12222 22 23356789999987
Q ss_pred cC
Q 039397 119 SL 120 (349)
Q Consensus 119 g~ 120 (349)
..
T Consensus 224 p~ 225 (300)
T 2rir_A 224 PS 225 (300)
T ss_dssp SS
T ss_pred Ch
Confidence 64
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0039 Score=55.21 Aligned_cols=45 Identities=13% Similarity=0.228 Sum_probs=40.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI 89 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~ 89 (349)
++||+++|.|+|+-+|+.+|+.|.++|++|.++.++...+++...
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~ 192 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTR 192 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHH
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhc
Confidence 899999999999999999999999999999999987766665443
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0044 Score=56.41 Aligned_cols=68 Identities=12% Similarity=0.160 Sum_probs=47.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----cccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----NKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----~~~~g~iDvlVnnAg 119 (349)
.|++++|+||+|++|...++.+...|++|+++++++ ++ +...++. ... .+... .+...++|++++++|
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~lG--a~~--~i~~~~~~~~~~~~~g~D~v~d~~g 224 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKALG--AEQ--CINYHEEDFLLAISTPVDAVIDLVG 224 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHHT--CSE--EEETTTSCHHHHCCSCEEEEEESSC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHcC--CCE--EEeCCCcchhhhhccCCCEEEECCC
Confidence 588999999999999999999999999999998543 33 3333331 111 22211 122357999999888
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.024 Score=51.66 Aligned_cols=72 Identities=19% Similarity=0.263 Sum_probs=55.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcC------CCCeEEEEEeccccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYN------PINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
++|.|.|| |.+|..++..|+..|. +|++.|+++++++....++.. ...++. ...|.+.....|++|..+|.
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~-~t~d~~al~~aD~Vi~a~g~ 82 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVS-GSNTYDDLAGADVVIVTAGF 82 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEE-EECCGGGGTTCSEEEECCSC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEE-ECCCHHHhCCCCEEEEeCCC
Confidence 47889998 9999999999999998 999999999888765554422 122222 22566677889999999986
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 83 p 83 (322)
T 1t2d_A 83 T 83 (322)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0045 Score=57.32 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe-----c---cccCC-Ccceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSL-----N---NKESK-AVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-----d---~~~~g-~iDvlV 115 (349)
.|++|+|+|| |++|...++.+... |++|+++++++++++.+. ++ +...+ +.. + ....+ ++|++|
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l--Ga~~v--i~~~~~~~~~v~~~~~g~g~Dvvi 259 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL--GADHV--VDARRDPVKQVMELTRGRGVNVAM 259 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT--TCSEE--EETTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh--CCCEE--EeccchHHHHHHHHhCCCCCcEEE
Confidence 5789999999 89999999988888 999999999988776543 33 11111 111 1 11123 799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
.++|.
T Consensus 260 d~~G~ 264 (359)
T 1h2b_A 260 DFVGS 264 (359)
T ss_dssp ESSCC
T ss_pred ECCCC
Confidence 99984
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0027 Score=54.04 Aligned_cols=70 Identities=21% Similarity=0.263 Sum_probs=48.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEeccccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
+++|+||+|.+|.++++.|++.|++|++++|++++.+...++.. ....++.. ....+.....|++|++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITG-MKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEE-EEHHHHHHHCSEEEECSC
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCCh-hhHHHHHhcCCEEEEeCC
Confidence 58899999999999999999999999999999887766544321 00012221 111222345799998764
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.021 Score=51.69 Aligned_cols=111 Identities=15% Similarity=0.120 Sum_probs=68.9
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCC---CCeEEEEE-eccccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNP---INEVTLVS-LNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~---~~~~~~~~-~d~~~~g~iDvlVnnAg~~ 121 (349)
.++.|.|+ |.+|..++..|++.|+ +|++++|++++++....++... ........ .|.+.....|++|.+++..
T Consensus 8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~ 86 (319)
T 1lld_A 8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR 86 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCC
Confidence 47899998 9999999999999999 9999999987665322221100 01122222 2555667889999999854
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
... . +.-...+..|..-...+++.+.++ ..++.||.++
T Consensus 87 ~~~------g-~~r~~~~~~n~~~~~~~~~~i~~~--~~~~~vi~~~ 124 (319)
T 1lld_A 87 QKP------G-QSRLELVGATVNILKAIMPNLVKV--APNAIYMLIT 124 (319)
T ss_dssp CCT------T-CCHHHHHHHHHHHHHHHHHHHHHH--CTTSEEEECC
T ss_pred CCC------C-CCHHHHHHHHHHHHHHHHHHHHHh--CCCceEEEec
Confidence 221 1 112345666666555566665553 2334555543
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.022 Score=51.84 Aligned_cols=108 Identities=17% Similarity=0.177 Sum_probs=71.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcC-----CCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYN-----PINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~-----~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
++.|.|+ |.+|.+++..|++.|+ +|++.++++++++....++.. ....+. ..|.+.....|++|.+++..
T Consensus 2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~--~~d~~~~~~aDvViiav~~~ 78 (319)
T 1a5z_A 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY--AGDYADLKGSDVVIVAAGVP 78 (319)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE--ECCGGGGTTCSEEEECCCCC
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE--eCCHHHhCCCCEEEEccCCC
Confidence 5889998 9999999999999999 999999998877765543311 111222 23556667889999999864
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
... ..+. ...+..|..-...+.+.+.++- ..+.||++|
T Consensus 79 ~~~------g~~r-~dl~~~n~~i~~~i~~~i~~~~--~~~~ii~~t 116 (319)
T 1a5z_A 79 QKP------GETR-LQLLGRNARVMKEIARNVSKYA--PDSIVIVVT 116 (319)
T ss_dssp CCS------SCCH-HHHHHHHHHHHHHHHHHHHHHC--TTCEEEECS
T ss_pred CCC------CCCH-HHHHHHHHHHHHHHHHHHHhhC--CCeEEEEeC
Confidence 311 1011 3455666665556666655542 345666654
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.004 Score=57.25 Aligned_cols=71 Identities=10% Similarity=0.089 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCcchhhhHHHHhcCCCCeEEEEE--ec----cccCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR--KANLVLVARRENRLQGSTIDEYNPINEVTLVS--LN----NKESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~--~d----~~~~g~iDvlVnn 117 (349)
.|++|+|+|| |++|...++.+... |++|+++++++++++.+. ++ +...+.... .| .....++|++|++
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l--Ga~~vi~~~~~~~~~~~~~~g~g~D~vid~ 245 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL--GADYVSEMKDAESLINKLTDGLGASIAIDL 245 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH--TCSEEECHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh--CCCEEeccccchHHHHHhhcCCCccEEEEC
Confidence 6899999999 89999999988888 999999999988776543 33 111111000 11 1112379999999
Q ss_pred CcC
Q 039397 118 ASL 120 (349)
Q Consensus 118 Ag~ 120 (349)
+|.
T Consensus 246 ~g~ 248 (344)
T 2h6e_A 246 VGT 248 (344)
T ss_dssp SCC
T ss_pred CCC
Confidence 883
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0061 Score=54.25 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=52.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
.+|+++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++++++.. .+ ..+.. ....|++||+-...
T Consensus 118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~-----~~-~~~~~-~~~~DivInaTp~g 186 (271)
T 1npy_A 118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY-----AY-INSLE-NQQADILVNVTSIG 186 (271)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC-----EE-ESCCT-TCCCSEEEECSSTT
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC-----cc-chhhh-cccCCEEEECCCCC
Confidence 4688999995 8999999999999997 899999999888888776531 11 11112 34689999987654
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0014 Score=60.37 Aligned_cols=68 Identities=24% Similarity=0.217 Sum_probs=49.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEe---c----c--ccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSL---N----N--KESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~---d----~--~~~g~iDvlV 115 (349)
.|++|+|+|| |++|...++.+...|+ +|+++++++++++.+.. + ... .+.. | . ...+++|++|
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l---a~~--v~~~~~~~~~~~~~~~~~~g~D~vi 236 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y---ADR--LVNPLEEDLLEVVRRVTGSGVEVLL 236 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T---CSE--EECTTTSCHHHHHHHHHSSCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---HHh--ccCcCccCHHHHHHHhcCCCCCEEE
Confidence 7899999999 9999999999989999 99999999877654322 1 111 1111 1 0 0134799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+++|.
T Consensus 237 d~~g~ 241 (343)
T 2dq4_A 237 EFSGN 241 (343)
T ss_dssp ECSCC
T ss_pred ECCCC
Confidence 99883
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.023 Score=51.99 Aligned_cols=115 Identities=20% Similarity=0.136 Sum_probs=69.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhc------CCCCeEEEEEeccc-cCCCcceeeecCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEY------NPINEVTLVSLNNK-ESKAVDHLVNTAS 119 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~------~~~~~~~~~~~d~~-~~g~iDvlVnnAg 119 (349)
.+|.|.|| |.+|.++|..|+..|+ +|++.++++++++....++. ....++. ...|.+ .....|++|..+|
T Consensus 10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~-~t~d~~ea~~~aDiVi~a~g 87 (331)
T 1pzg_A 10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AEYSYEAALTGADCVIVTAG 87 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EECSHHHHHTTCSEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEE-EeCCHHHHhCCCCEEEEccC
Confidence 47899998 9999999999999998 99999999988776443331 1112222 234544 5677899999998
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
......... +..+. ...+..|..-...+.+.+.++- ..+.++++|
T Consensus 88 ~p~~~g~~~-~~~~r-~dl~~~n~~i~~~i~~~i~~~~--p~a~vi~~t 132 (331)
T 1pzg_A 88 LTKVPGKPD-SEWSR-NDLLPFNSKIIREIGQNIKKYC--PKTFIIVVT 132 (331)
T ss_dssp CSSCTTCCG-GGCCG-GGGHHHHHHHHHHHHHHHHHHC--TTCEEEECC
T ss_pred CCCCCCccc-CCCCH-HHHHHHHHHHHHHHHHHHHHHC--CCcEEEEEc
Confidence 743221100 00011 2334555555555555554442 345555543
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.012 Score=53.29 Aligned_cols=111 Identities=21% Similarity=0.239 Sum_probs=73.4
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCC----CCeEEEEE-eccccCCCcceeeecCcCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNP----INEVTLVS-LNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~~-~d~~~~g~iDvlVnnAg~~~ 122 (349)
+|.|+|| |.+|..++..++..|. +|++.|+++++++....++.+. .....+.. .|.+.....|++|..+|...
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSYEDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCSCCC
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCHHHhCCCCEEEEeCCCCC
Confidence 3788998 9999999999999887 7999999998887655555221 11222223 56677888999999999753
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... ..-...+..|..-...+.+.+..+ ..++.+|++|-
T Consensus 80 k~G-------~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~tN 117 (308)
T 2d4a_B 80 KPG-------MTREQLLEANANTMADLAEKIKAY--AKDAIVVITTN 117 (308)
T ss_dssp CSS-------CCTHHHHHHHHHHHHHHHHHHHHH--CTTCEEEECCS
T ss_pred CCC-------CcHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 211 111344566665555555555443 23467777643
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0067 Score=56.45 Aligned_cols=71 Identities=15% Similarity=0.096 Sum_probs=49.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEE-Eec-----c----ccCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLV-SLN-----N----KESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~-~~d-----~----~~~g~iDvl 114 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.. .++. ...+... ..| . ...|++|++
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lG--a~~vi~~~~~~~~~~i~~~~~~~~gg~Dvv 257 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEVG--ATATVDPSAGDVVEAIAGPVGLVPGGVDVV 257 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHT--CSEEECTTSSCHHHHHHSTTSSSTTCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcC--CCEEECCCCcCHHHHHHhhhhccCCCCCEE
Confidence 5789999998 8999999998888999 899999988776643 3331 1111100 011 1 223589999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
++++|.
T Consensus 258 id~~G~ 263 (370)
T 4ej6_A 258 IECAGV 263 (370)
T ss_dssp EECSCC
T ss_pred EECCCC
Confidence 999873
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0065 Score=54.64 Aligned_cols=71 Identities=20% Similarity=0.231 Sum_probs=52.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe-c-cccCCCcceeeecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL-N-NKESKAVDHLVNTAS 119 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-d-~~~~g~iDvlVnnAg 119 (349)
..++.||+++|.|+ |+||+++++.+...|++|++.+|+.++.+... +. +. ..+.. + .+.....|+++++..
T Consensus 150 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~---g~--~~~~~~~l~~~l~~aDvVi~~~p 222 (293)
T 3d4o_A 150 DFTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EM---GM--EPFHISKAAQELRDVDVCINTIP 222 (293)
T ss_dssp SSCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT---TS--EEEEGGGHHHHTTTCSEEEECCS
T ss_pred CCCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HC---CC--eecChhhHHHHhcCCCEEEECCC
Confidence 34789999999995 89999999999999999999999987654332 21 11 22221 2 233567899999874
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.013 Score=54.12 Aligned_cols=68 Identities=21% Similarity=0.261 Sum_probs=47.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
+++||++.|.| .|.||..+|+.+.+.|++|++.+++.++ .+...+. + ...+..+.-..-..|+++.+|
T Consensus 172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~---g--a~~v~~~ell~~~~DIliP~A 239 (355)
T 1c1d_A 172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVAL---G--HTAVALEDVLSTPCDVFAPCA 239 (355)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHT---T--CEECCGGGGGGCCCSEEEECS
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhc---C--CEEeChHHhhcCccceecHhH
Confidence 79999999997 5999999999999999999999888654 3333332 1 222222211122678888764
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0072 Score=56.44 Aligned_cols=71 Identities=15% Similarity=0.142 Sum_probs=49.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEE----ec-----cc-cCC-Ccce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVS----LN-----NK-ESK-AVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~----~d-----~~-~~g-~iDv 113 (349)
.|++|+|+| +|++|...++.+...| ++|+++++++++++.+. ++ +...+.... .| .+ ..+ ++|+
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l--Ga~~vi~~~~~~~~~~~~~v~~~~~g~g~Dv 270 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI--GADLTLNRRETSVEERRKAIMDITHGRGADF 270 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT--TCSEEEETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc--CCcEEEeccccCcchHHHHHHHHhCCCCCcE
Confidence 588999999 8999999999988899 59999999988776543 32 122121111 11 11 122 6999
Q ss_pred eeecCcC
Q 039397 114 LVNTASL 120 (349)
Q Consensus 114 lVnnAg~ 120 (349)
+|+++|.
T Consensus 271 vid~~g~ 277 (380)
T 1vj0_A 271 ILEATGD 277 (380)
T ss_dssp EEECSSC
T ss_pred EEECCCC
Confidence 9999984
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0089 Score=55.60 Aligned_cols=69 Identities=12% Similarity=0.169 Sum_probs=49.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----------cccCCCcce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----------NKESKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----------~~~~g~iDv 113 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +... .+... ....+++|+
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l--Ga~~--vi~~~~~~~~~~~~~~~~~~~g~D~ 264 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV--GATE--CVNPQDYKKPIQEVLTEMSNGGVDF 264 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT--TCSE--EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh--CCce--EecccccchhHHHHHHHHhCCCCcE
Confidence 5789999995 9999999999989999 8999999988876543 32 1111 11111 011247999
Q ss_pred eeecCcC
Q 039397 114 LVNTASL 120 (349)
Q Consensus 114 lVnnAg~ 120 (349)
+|+++|.
T Consensus 265 vid~~g~ 271 (374)
T 2jhf_A 265 SFEVIGR 271 (374)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9999884
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0074 Score=51.61 Aligned_cols=65 Identities=18% Similarity=0.195 Sum_probs=48.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------ccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------KESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------~~~g~iDvlVnnAg 119 (349)
+++|.|+ |.+|..+++.|.++|++|++++++++..+...... ....+..|. ......|++|.+.+
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 4899997 99999999999999999999999998877655432 234455552 12456788776543
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0034 Score=58.40 Aligned_cols=70 Identities=17% Similarity=0.286 Sum_probs=46.5
Q ss_pred CCCCCCC--EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-------ccCCCcc
Q 039397 42 SENMEDK--VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-------KESKAVD 112 (349)
Q Consensus 42 ~~~l~~k--~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~iD 112 (349)
..+|+|| +|+|.|| |++|+.+++.|++ .++|.+.+|+.++++..... ...+..|. +...+.|
T Consensus 9 ~~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~-------~~~~~~d~~d~~~l~~~~~~~D 79 (365)
T 3abi_A 9 HHHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEF-------ATPLKVDASNFDKLVEVMKEFE 79 (365)
T ss_dssp -------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTT-------SEEEECCTTCHHHHHHHHTTCS
T ss_pred cccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhcc-------CCcEEEecCCHHHHHHHHhCCC
Confidence 3456654 6899998 9999999999865 58999999998887654322 22344442 2235789
Q ss_pred eeeecCcC
Q 039397 113 HLVNTASL 120 (349)
Q Consensus 113 vlVnnAg~ 120 (349)
++||+++.
T Consensus 80 vVi~~~p~ 87 (365)
T 3abi_A 80 LVIGALPG 87 (365)
T ss_dssp EEEECCCG
T ss_pred EEEEecCC
Confidence 99998864
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0072 Score=53.85 Aligned_cols=47 Identities=15% Similarity=0.152 Sum_probs=41.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI 89 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~ 89 (349)
.+++||+++|.|+|.-+|+-+|+.|..+|++|.++.++...+.+...
T Consensus 155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~ 201 (288)
T 1b0a_A 155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE 201 (288)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhc
Confidence 47899999999999989999999999999999999988877665443
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0085 Score=51.60 Aligned_cols=119 Identities=9% Similarity=0.079 Sum_probs=66.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTAS 119 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg 119 (349)
.+++||.+||.|| |-+|...++.|.+.|++|++++.+... +++... . ..+.++..+ .+.....|.+|.+.+
T Consensus 27 l~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~---~--~~i~~i~~~~~~~dL~~adLVIaAT~ 100 (223)
T 3dfz_A 27 LDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEA---K--GQLRVKRKKVGEEDLLNVFFIVVATN 100 (223)
T ss_dssp ECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHH---T--TSCEEECSCCCGGGSSSCSEEEECCC
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH---c--CCcEEEECCCCHhHhCCCCEEEECCC
Confidence 4789999999998 589999999999999999999986432 332222 1 133343322 344556788886654
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
.......... . . +.-+-+|+.-.-..+....|...++++-.|.|||..
T Consensus 101 d~~~N~~I~~-~-a--k~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G 148 (223)
T 3dfz_A 101 DQAVNKFVKQ-H-I--KNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDG 148 (223)
T ss_dssp CTHHHHHHHH-H-S--CTTCEEEC-----CCSEECCEEEEETTEEEEEECTT
T ss_pred CHHHHHHHHH-H-H--hCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCC
Confidence 3110000000 0 0 001123444444445555666666666667776643
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0073 Score=54.74 Aligned_cols=67 Identities=9% Similarity=0.057 Sum_probs=47.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-CCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-SKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~g~iDvlVnnAg~ 120 (349)
.|++|+|+|| |++|...++.+...|++|++++ ++++++.+. ++ +. ...+. |.++ .+++|+++.++|.
T Consensus 142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~l---Ga-~~v~~-d~~~v~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KR---GV-RHLYR-EPSQVTQKYFAIFDAVNS 209 (315)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HH---TE-EEEES-SGGGCCSCEEEEECC---
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-Hc---CC-CEEEc-CHHHhCCCccEEEECCCc
Confidence 5899999999 9999999998888999999999 777766543 33 11 11121 3222 4579999998874
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0069 Score=54.31 Aligned_cols=45 Identities=11% Similarity=0.173 Sum_probs=39.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG 86 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~ 86 (349)
.-+++||.++|.|+|.-+|+-+|+.|..+|++|.++.++...+++
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~ 204 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE 204 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHH
Confidence 347899999999999999999999999999999999887665544
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0087 Score=56.36 Aligned_cols=69 Identities=13% Similarity=0.157 Sum_probs=49.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvl 114 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++. . + ..+..+ .....++|++
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lG--a-~-~vi~~~~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELG--A-D-HVIDPTKENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHT--C-S-EEECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcC--C-C-EEEcCCCCCHHHHHHHHhCCCCCCEE
Confidence 5889999998 8999999998888999 8999999988776443 331 1 1 112111 1112369999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
+.++|.
T Consensus 287 id~~g~ 292 (404)
T 3ip1_A 287 LEATGV 292 (404)
T ss_dssp EECSSC
T ss_pred EECCCC
Confidence 999884
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.27 E-value=0.025 Score=51.33 Aligned_cols=73 Identities=25% Similarity=0.326 Sum_probs=53.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhc------CCCCeEEEEEeccccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEY------NPINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~------~~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
+++.|.|+ |.+|..+|..|++.|+ +|++.++++++++....++. .....+. ...|.+.....|++|.++|.
T Consensus 5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~-~t~d~~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVI-GTDDYADISGSDVVIITASI 82 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE-EESCGGGGTTCSEEEECCCC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEE-ECCCHHHhCCCCEEEEeCCC
Confidence 57889998 9999999999999998 99999999887775432221 1112222 22455666788999999987
Q ss_pred CC
Q 039397 121 GH 122 (349)
Q Consensus 121 ~~ 122 (349)
..
T Consensus 83 p~ 84 (317)
T 2ewd_A 83 PG 84 (317)
T ss_dssp SS
T ss_pred CC
Confidence 53
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.23 E-value=0.01 Score=55.09 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=48.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEe---c------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSL---N------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~---d------~~~~g~iDvlV 115 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++. . +. .+.. | ....+++|++|
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~lG--a-~~-vi~~~~~~~~~~~~~~~~gg~D~vi 263 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLG--A-TH-VINSKTQDPVAAIKEITDGGVNFAL 263 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHT--C-SE-EEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcC--C-CE-EecCCccCHHHHHHHhcCCCCcEEE
Confidence 5789999995 8999999988888999 6999999988776543 331 1 11 1111 1 11124799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
+++|.
T Consensus 264 d~~g~ 268 (371)
T 1f8f_A 264 ESTGS 268 (371)
T ss_dssp ECSCC
T ss_pred ECCCC
Confidence 99883
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.011 Score=54.72 Aligned_cols=69 Identities=10% Similarity=0.154 Sum_probs=47.2
Q ss_pred CCCCEEEEeCCCchHHHHH-HHHH-HHcCCe-EEEEecCcc---hhhhHHHHhcCCCCeEEEEEecc-------ccCCCc
Q 039397 45 MEDKVVIITGASSDIGEQI-AYEY-AKRKAN-LVLVARREN---RLQGSTIDEYNPINEVTLVSLNN-------KESKAV 111 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~al-a~~l-a~~G~~-Vv~~~r~~~---~l~~~~~~~~~~~~~~~~~~~d~-------~~~g~i 111 (349)
+++++|+|+|| |++|... ++.+ ...|++ |++++++++ +++.+. ++ +.+. . .... +..+++
T Consensus 171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l---Ga~~-v-~~~~~~~~~i~~~~gg~ 243 (357)
T 2b5w_A 171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL---DATY-V-DSRQTPVEDVPDVYEQM 243 (357)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT---TCEE-E-ETTTSCGGGHHHHSCCE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc---CCcc-c-CCCccCHHHHHHhCCCC
Confidence 44599999999 9999999 7766 568997 999999887 665443 32 1111 1 1110 002478
Q ss_pred ceeeecCcC
Q 039397 112 DHLVNTASL 120 (349)
Q Consensus 112 DvlVnnAg~ 120 (349)
|++|.++|.
T Consensus 244 Dvvid~~g~ 252 (357)
T 2b5w_A 244 DFIYEATGF 252 (357)
T ss_dssp EEEEECSCC
T ss_pred CEEEECCCC
Confidence 999998883
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0056 Score=52.42 Aligned_cols=65 Identities=14% Similarity=0.127 Sum_probs=46.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
++++.|.| +|.+|.++++.|++.|++|++++|++++.+.... .+ +... ...+.....|++|.+..
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~g--~~~~-~~~~~~~~~DvVi~av~ 92 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP----SA--AQVT-FQEEAVSSPEVIFVAVF 92 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB----TT--SEEE-EHHHHTTSCSEEEECSC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC--Ccee-cHHHHHhCCCEEEECCC
Confidence 35688888 7999999999999999999999999876554322 12 2222 12233457899998765
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.013 Score=54.02 Aligned_cols=71 Identities=15% Similarity=0.121 Sum_probs=49.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEE----ec-----cc-cCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVS----LN-----NK-ESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~----~d-----~~-~~g~iDvl 114 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +...+.... .+ .+ ..+++|++
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l--Ga~~vi~~~~~~~~~~~~~i~~~~~~g~D~v 246 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI--GADLVLQISKESPQEIARKVEGQLGCKPEVT 246 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT--TCSEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh--CCCEEEcCcccccchHHHHHHHHhCCCCCEE
Confidence 5789999996 8999999988888999 9999999988766443 33 112221111 11 00 11579999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
|+++|.
T Consensus 247 id~~g~ 252 (356)
T 1pl8_A 247 IECTGA 252 (356)
T ss_dssp EECSCC
T ss_pred EECCCC
Confidence 999883
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.01 Score=55.65 Aligned_cols=69 Identities=25% Similarity=0.220 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc----------cCC-Ccce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK----------ESK-AVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~----------~~g-~iDv 113 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +.+ .+....+ ..+ ++|+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~--~i~~~~~~~~~~~~~~~~~g~g~Dv 257 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DA---GFE--TIDLRNSAPLRDQIDQILGKPEVDC 257 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TT---TCE--EEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc---CCc--EEcCCCcchHHHHHHHHhCCCCCCE
Confidence 5889999997 9999999988888999 9999999988776433 22 222 2221111 112 6999
Q ss_pred eeecCcCC
Q 039397 114 LVNTASLG 121 (349)
Q Consensus 114 lVnnAg~~ 121 (349)
+|.++|..
T Consensus 258 vid~~g~~ 265 (398)
T 2dph_A 258 GVDAVGFE 265 (398)
T ss_dssp EEECSCTT
T ss_pred EEECCCCc
Confidence 99999853
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0073 Score=54.84 Aligned_cols=79 Identities=15% Similarity=0.018 Sum_probs=55.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEE----ec-cccCCCcceeee
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVS----LN-NKESKAVDHLVN 116 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~----~d-~~~~g~iDvlVn 116 (349)
..+++||+++|.|++.=+|+-+|+.|+++|++|.+++|+..++.+....+.........+. .| .+....-|++|.
T Consensus 172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 3479999999999988899999999999999999999986655443333321111111111 22 233456799999
Q ss_pred cCcC
Q 039397 117 TASL 120 (349)
Q Consensus 117 nAg~ 120 (349)
..|.
T Consensus 252 Atg~ 255 (320)
T 1edz_A 252 GVPS 255 (320)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8886
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.009 Score=52.67 Aligned_cols=71 Identities=10% Similarity=0.176 Sum_probs=49.1
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCcchhhhHHHHhcCCCCeEEEEEecc-ccCCCcceeeecC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKAN-LVLVARRENRLQGSTIDEYNPINEVTLVSLNN-KESKAVDHLVNTA 118 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-~~~g~iDvlVnnA 118 (349)
|+.++.+.++.|.|+ |.+|..+++.|++.|++ |.+++|++++.+...+... +.. ..+. +.....|++|.+.
T Consensus 4 m~~~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g-----~~~-~~~~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE-----AEY-TTDLAEVNPYAKLYIVSL 76 (266)
T ss_dssp ---CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT-----CEE-ESCGGGSCSCCSEEEECC
T ss_pred hhcCCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC-----Cce-eCCHHHHhcCCCEEEEec
Confidence 344444557888897 99999999999999998 8999999888776655431 111 2232 3345678888765
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0041 Score=58.12 Aligned_cols=70 Identities=14% Similarity=0.154 Sum_probs=50.3
Q ss_pred CCCEEEEeC-CCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------c--ccCCCccee
Q 039397 46 EDKVVIITG-ASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------N--KESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTG-as~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~--~~~g~iDvl 114 (349)
.|++++|.| |+|++|...++.+...|++|+++++++++++.+. ++ +...+ +... . ....++|++
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l--Ga~~~--~~~~~~~~~~~v~~~t~~~g~d~v 244 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ--GAVHV--CNAASPTFMQDLTEALVSTGATIA 244 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT--TCSCE--EETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC--CCcEE--EeCCChHHHHHHHHHhcCCCceEE
Confidence 578899997 9999999999999899999999999988876544 22 11111 2111 0 111369999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
+.++|.
T Consensus 245 ~d~~g~ 250 (379)
T 3iup_A 245 FDATGG 250 (379)
T ss_dssp EESCEE
T ss_pred EECCCc
Confidence 999984
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=95.99 E-value=0.011 Score=54.46 Aligned_cols=69 Identities=14% Similarity=0.148 Sum_probs=48.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvl 114 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++... ++. .+ ..+..+ .....++|++
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lG---a~-~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EYG---AT-DIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HHT---CC-EEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhC---Cc-eEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 5789999995 9999999988888999 8999999887765433 331 11 122211 1112369999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
+.++|.
T Consensus 240 ~d~~g~ 245 (352)
T 3fpc_A 240 VIAGGD 245 (352)
T ss_dssp EECSSC
T ss_pred EECCCC
Confidence 998884
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.014 Score=53.46 Aligned_cols=72 Identities=22% Similarity=0.245 Sum_probs=54.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcC------CCCeEEEEEeccccCCCcceeeecCcC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYN------PINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
++|.|.|| |.+|..+|..|+..|+ +|++.++++++++....++.. ....+. ...|.+.....|++|..+|.
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~-~t~d~~al~~aD~VI~avg~ 92 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIF-GENNYEYLQNSDVVIITAGV 92 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE-EESCGGGGTTCSEEEECCSC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEE-ECCCHHHHCCCCEEEEcCCC
Confidence 57899998 9999999999999998 999999999887754433311 122232 22566667789999999986
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 93 p 93 (328)
T 2hjr_A 93 P 93 (328)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0056 Score=55.44 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=33.2
Q ss_pred CCCCCE-EEEeCCCc-----------------h-HHHHHHHHHHHcCCeEEEEecCc
Q 039397 44 NMEDKV-VIITGASS-----------------D-IGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 44 ~l~~k~-vlVTGas~-----------------G-IG~ala~~la~~G~~Vv~~~r~~ 81 (349)
++.||+ ||||+|.. | .|.++|++++++||+|+++.+..
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 467887 99998765 5 99999999999999999999864
|
| >3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.021 Score=53.75 Aligned_cols=75 Identities=11% Similarity=0.115 Sum_probs=49.6
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEE-EEec----------CcchhhhHHHHhcCCCCeEEEEEeccccCCC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLV-LVAR----------RENRLQGSTIDEYNPINEVTLVSLNNKESKA 110 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv-~~~r----------~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~ 110 (349)
..+++||+++|+| .|.+|..+|+.|.+.|++|+ +.++ +.+.+.+..++...- ... .+..+.-..-.
T Consensus 213 g~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v-~~~-~~~~~e~~~~~ 289 (419)
T 3aoe_E 213 GLDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSL-PRL-DLAPEEVFGLE 289 (419)
T ss_dssp TCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSC-SCC-CBCTTTGGGSS
T ss_pred CCCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCc-cee-eccchhhhccC
Confidence 3478999999999 79999999999999999999 7777 445555544432110 000 01111112236
Q ss_pred cceeeecCc
Q 039397 111 VDHLVNTAS 119 (349)
Q Consensus 111 iDvlVnnAg 119 (349)
+|+++-||-
T Consensus 290 ~DVliP~A~ 298 (419)
T 3aoe_E 290 AEVLVLAAR 298 (419)
T ss_dssp CSEEEECSC
T ss_pred ceEEEeccc
Confidence 799999874
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=95.78 E-value=0.012 Score=52.32 Aligned_cols=46 Identities=15% Similarity=0.301 Sum_probs=39.9
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHc--CCeEEEEecCcchhhhH
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKR--KANLVLVARRENRLQGS 87 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~--G~~Vv~~~r~~~~l~~~ 87 (349)
.-+++||+++|.|+|.=+|+-+|+.|.++ |++|.++.|+.+.+.+.
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~~ 200 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPAL 200 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHHH
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHHH
Confidence 34799999999999888999999999999 89999998887655543
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=95.67 E-value=0.052 Score=49.01 Aligned_cols=109 Identities=15% Similarity=0.124 Sum_probs=66.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhc-CCCCeEEEEEeccccCCCcceeeecCcCCCCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEY-NPINEVTLVSLNNKESKAVDHLVNTASLGHTF 124 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~ 124 (349)
++|.|.|| |.+|..++..++.+|. +|++.|++++ ......++. .....+.. ..|.+.....|++|..+|...++
T Consensus 15 ~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~-t~d~~~l~~aD~Vi~aag~~~pG 91 (303)
T 2i6t_A 15 NKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFNLPNVEI-SKDLSASAHSKVVIFTVNSLGSS 91 (303)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHTCTTEEE-ESCGGGGTTCSEEEECCCC----
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhcCCCeEE-eCCHHHHCCCCEEEEcCCCCCCC
Confidence 67999996 7899999999999998 9999999986 333333331 11123433 36777788899999999984211
Q ss_pred cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 125 FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 125 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
+.-...+..|..-...+.+.+..+- ..+.++++|-
T Consensus 92 --------~tR~dl~~~n~~i~~~i~~~i~~~~--p~a~iiv~sN 126 (303)
T 2i6t_A 92 --------QSYLDVVQSNVDMFRALVPALGHYS--QHSVLLVASQ 126 (303)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHHT--TTCEEEECSS
T ss_pred --------CCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEcCC
Confidence 1123455556555445555444432 3456666544
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.67 E-value=0.027 Score=52.78 Aligned_cols=69 Identities=19% Similarity=0.178 Sum_probs=49.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEecc---------c--cCCCcce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNN---------K--ESKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~---------~--~~g~iDv 113 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +.+ .+.... + ...++|+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~--~i~~~~~~~~~~~v~~~t~g~g~Dv 257 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ---GFE--IADLSLDTPLHEQIAALLGEPEVDC 257 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCE--EEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc---CCc--EEccCCcchHHHHHHHHhCCCCCCE
Confidence 5889999995 9999999988888999 7999999988776543 33 112 222110 1 1236999
Q ss_pred eeecCcCC
Q 039397 114 LVNTASLG 121 (349)
Q Consensus 114 lVnnAg~~ 121 (349)
+|.++|..
T Consensus 258 vid~~G~~ 265 (398)
T 1kol_A 258 AVDAVGFE 265 (398)
T ss_dssp EEECCCTT
T ss_pred EEECCCCc
Confidence 99999854
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.021 Score=52.43 Aligned_cols=71 Identities=8% Similarity=0.101 Sum_probs=48.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnn 117 (349)
.|++++|+|+ |++|...++.+... |++|+++++++++++.+. ++ +...+.....| .....++|+++.+
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~l--Ga~~~i~~~~~~~~~v~~~t~g~g~d~v~d~ 246 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EV--GADAAVKSGAGAADAIRELTGGQGATAVFDF 246 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HT--TCSEEEECSTTHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc--CCCEEEcCCCcHHHHHHHHhCCCCCeEEEEC
Confidence 5889999998 99999988877777 789999999988876543 32 11122111111 1112379999999
Q ss_pred CcC
Q 039397 118 ASL 120 (349)
Q Consensus 118 Ag~ 120 (349)
+|.
T Consensus 247 ~G~ 249 (345)
T 3jv7_A 247 VGA 249 (345)
T ss_dssp SCC
T ss_pred CCC
Confidence 884
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.55 E-value=0.02 Score=51.83 Aligned_cols=115 Identities=13% Similarity=0.011 Sum_probs=69.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcC----CCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYN----PINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
+++.|.| +|.+|..++..|++.| ++|++.+|++++++....++.. ..........|.+.....|++|.+++..
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCG
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHHHhCCCCEEEEecCCc
Confidence 3688999 7999999999999999 7999999998887766544320 1112233234556667889999998864
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
.... +.+. ..-...+..|+.-...+.+.+.++. .++.||+++
T Consensus 81 ~~~~--~~~g-~~r~~l~~~n~~i~~~i~~~i~~~~--~~~~ii~~t 122 (309)
T 1hyh_A 81 KLQQ--DNPT-GDRFAELKFTSSMVQSVGTNLKESG--FHGVLVVIS 122 (309)
T ss_dssp GGTC----------CTTHHHHHHHHHHHHHHHHHTT--CCSEEEECS
T ss_pred ccCC--CCCC-CCHHHHHHHHHHHHHHHHHHHHHHC--CCcEEEEEc
Confidence 3100 0000 0011234455554455555554442 245566543
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=95.50 E-value=0.042 Score=49.23 Aligned_cols=39 Identities=21% Similarity=0.260 Sum_probs=33.7
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
.+.+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 34678899999987 8999999999999995 899998875
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.025 Score=53.57 Aligned_cols=70 Identities=21% Similarity=0.267 Sum_probs=48.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
...+.||+++|.|. |.||+.+|+.+...|++|+++++++....+...+ + ...+..+ +.....|+++.+.|
T Consensus 242 g~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~----G--~~vv~Le-ElL~~ADIVv~atg 311 (464)
T 3n58_A 242 DVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMD----G--FEVVTLD-DAASTADIVVTTTG 311 (464)
T ss_dssp CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT----T--CEECCHH-HHGGGCSEEEECCS
T ss_pred CCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhc----C--ceeccHH-HHHhhCCEEEECCC
Confidence 45789999999996 5699999999999999999999987543322111 1 1122222 22345688887654
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.01 Score=50.92 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=48.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEE-EecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVL-VARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~-~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
+++.|.| +|.+|.++++.|++.|++|++ .+|++++.++...+... .. ...+.+.....|++|.+.
T Consensus 24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~---~~--~~~~~~~~~~aDvVilav 89 (220)
T 4huj_A 24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGA---SV--KAVELKDALQADVVILAV 89 (220)
T ss_dssp CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTT---TE--EECCHHHHTTSSEEEEES
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCC---Cc--ccChHHHHhcCCEEEEeC
Confidence 4688889 799999999999999999999 89999888876655421 11 122233345679988765
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=95.41 E-value=0.014 Score=53.87 Aligned_cols=73 Identities=12% Similarity=0.049 Sum_probs=44.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC-----C-eEEEEecCcch---hhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK-----A-NLVLVARRENR---LQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G-----~-~Vv~~~r~~~~---l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
.+|.|.||+|-+|+.+.+.|.+++ . +++.+.++... +......+.. ..+..+...|.+....+|+++.+.
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~-~~~~~~~~~~~~~~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTP-LAHRVVEPTEAAVLGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGG-GTTCBCEECCHHHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccc-cceeeeccCCHHHhcCCCEEEECC
Confidence 579999999999999999999988 3 66666543221 2211111100 011222233434445789999998
Q ss_pred cCC
Q 039397 119 SLG 121 (349)
Q Consensus 119 g~~ 121 (349)
|..
T Consensus 89 g~~ 91 (352)
T 2nqt_A 89 PHG 91 (352)
T ss_dssp TTS
T ss_pred CCc
Confidence 753
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=95.26 E-value=0.02 Score=58.84 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=33.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
.|++|||.||+||+|.+.++.....|++|+++++++
T Consensus 345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~ 380 (795)
T 3slk_A 345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED 380 (795)
T ss_dssp TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH
Confidence 589999999999999999998888999999998765
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=95.25 E-value=0.019 Score=50.35 Aligned_cols=38 Identities=26% Similarity=0.377 Sum_probs=32.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
..+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.
T Consensus 24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3567889999998 7899999999999996 788887653
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.039 Score=49.52 Aligned_cols=63 Identities=13% Similarity=0.062 Sum_probs=45.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-cccCCCcceeeecCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-NKESKAVDHLVNTAS 119 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~~~g~iDvlVnnAg 119 (349)
+++.|.| .|-+|..+|+.|++.|++|++.+|++++.+...+. + ... ..+ .+... .|++|.+..
T Consensus 16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~----g--~~~-~~~~~~~~~-aDvvi~~vp 79 (296)
T 3qha_A 16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA----G--ATL-ADSVADVAA-ADLIHITVL 79 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT----T--CEE-CSSHHHHTT-SSEEEECCS
T ss_pred CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC----C--CEE-cCCHHHHHh-CCEEEEECC
Confidence 4567777 58999999999999999999999999887765542 1 121 222 22233 799887663
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.03 Score=49.93 Aligned_cols=42 Identities=19% Similarity=0.237 Sum_probs=36.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHH
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID 90 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~ 90 (349)
++|.|.|+ |.+|.++|+.|++.|++|++.+|+++.++...+.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 57778876 7899999999999999999999999887765544
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=95.08 E-value=0.028 Score=48.97 Aligned_cols=43 Identities=12% Similarity=0.184 Sum_probs=33.4
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
....++.++++.|.| .|.+|.++|+.|++.|++|++.+|++++
T Consensus 12 ~~~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 12 HENLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp -------CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred ccccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 344567788898886 7999999999999999999999999876
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=94.96 E-value=0.039 Score=63.38 Aligned_cols=44 Identities=11% Similarity=0.100 Sum_probs=38.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI 89 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~ 89 (349)
.|++|||.||+||+|.+.++.....|++|+++++++++.+.+.+
T Consensus 1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~ 1710 (2512)
T 2vz8_A 1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQA 1710 (2512)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHh
Confidence 58999999999999999998888899999999998877765554
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.031 Score=52.56 Aligned_cols=43 Identities=14% Similarity=0.033 Sum_probs=38.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
++.+++|+|+|+ |.+|+.+++.+...|++|++++|+.++++..
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 467999999997 8999999999999999999999998877654
|
| >1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.053 Score=51.88 Aligned_cols=119 Identities=15% Similarity=0.029 Sum_probs=69.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
.+++||.++|.|++ .+|...++.|.+.|++|.+++.+... +. .++... ..+.++..+ .+...+.|.+|.+.|.
T Consensus 8 ~~l~~~~vlVvGgG-~va~~k~~~L~~~ga~V~vi~~~~~~--~~-~~l~~~-~~i~~~~~~~~~~~l~~~~lVi~at~~ 82 (457)
T 1pjq_A 8 CQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFIP--QF-TVWANE-GMLTLVEGPFDETLLDSCWLAIAATDD 82 (457)
T ss_dssp ECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCCH--HH-HHHHTT-TSCEEEESSCCGGGGTTCSEEEECCSC
T ss_pred EECCCCEEEEECCC-HHHHHHHHHHHhCcCEEEEEcCCCCH--HH-HHHHhc-CCEEEEECCCCccccCCccEEEEcCCC
Confidence 37889999999985 69999999999999999999976432 11 122111 234444333 3334467888776553
Q ss_pred CCCc-cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecc
Q 039397 121 GHTF-FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASV 170 (349)
Q Consensus 121 ~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~ 170 (349)
.... .... +.-++-+-+|+.+-..++....|...++++-+|.|||.
T Consensus 83 ~~~n~~i~~----~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIsT~ 129 (457)
T 1pjq_A 83 DTVNQRVSD----AAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSG 129 (457)
T ss_dssp HHHHHHHHH----HHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEECT
T ss_pred HHHHHHHHH----HHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEECC
Confidence 2100 0000 00001122555565555556666665556668888853
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.074 Score=50.79 Aligned_cols=71 Identities=13% Similarity=0.150 Sum_probs=49.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC---C-----------CCeEEEEEeccc-cCCCcce
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN---P-----------INEVTLVSLNNK-ESKAVDH 113 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~---~-----------~~~~~~~~~d~~-~~g~iDv 113 (349)
++.|.|+ |-+|..+|..|++.|++|++++|++++.+.+.+.... . ..... ...|.+ .....|+
T Consensus 4 kI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~-~t~d~~ea~~~aDv 81 (450)
T 3gg2_A 4 DIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLR-FGTEIEQAVPEADI 81 (450)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEE-EESCHHHHGGGCSE
T ss_pred EEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEE-EECCHHHHHhcCCE
Confidence 5677775 9999999999999999999999999887766542110 0 11222 233433 2456799
Q ss_pred eeecCcCC
Q 039397 114 LVNTASLG 121 (349)
Q Consensus 114 lVnnAg~~ 121 (349)
+|.+.+..
T Consensus 82 ViiaVptp 89 (450)
T 3gg2_A 82 IFIAVGTP 89 (450)
T ss_dssp EEECCCCC
T ss_pred EEEEcCCC
Confidence 99887653
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=94.86 E-value=0.027 Score=48.57 Aligned_cols=63 Identities=14% Similarity=0.141 Sum_probs=45.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc--------ccCCCcceeeecC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN--------KESKAVDHLVNTA 118 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~--------~~~g~iDvlVnnA 118 (349)
.+.++|.|+ |.+|+.+++.|.++|+ |++++++++..+... . .+.++..|. ....+.|.+|.+.
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence 357889998 8999999999999999 999999987765443 1 245566652 1245677777654
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.033 Score=52.09 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=39.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
++.+++|+|+|+ |++|+.+++.+...|++|++++|+.++++...
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE 212 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 568999999996 89999999999999999999999987766543
|
| >1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=94.80 E-value=0.07 Score=51.23 Aligned_cols=75 Identities=20% Similarity=0.216 Sum_probs=52.4
Q ss_pred CCEEEEeCCCc-hHHHHHHHHHHHc----CCeEEEEecCcchhhhHHHHh----cCCCCeEEEE-Eecc-ccCCCcceee
Q 039397 47 DKVVIITGASS-DIGEQIAYEYAKR----KANLVLVARRENRLQGSTIDE----YNPINEVTLV-SLNN-KESKAVDHLV 115 (349)
Q Consensus 47 ~k~vlVTGas~-GIG~ala~~la~~----G~~Vv~~~r~~~~l~~~~~~~----~~~~~~~~~~-~~d~-~~~g~iDvlV 115 (349)
..+|.|.||++ |.|.+++..|++. |.+|++.++++++++...... ........+. ..|. +.....|++|
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 35788899999 9999999999864 899999999998776543221 1111122222 3454 5567889999
Q ss_pred ecCcCC
Q 039397 116 NTASLG 121 (349)
Q Consensus 116 nnAg~~ 121 (349)
..+|..
T Consensus 83 iaagv~ 88 (480)
T 1obb_A 83 NTAMVG 88 (480)
T ss_dssp ECCCTT
T ss_pred ECCCcc
Confidence 999864
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=94.77 E-value=0.048 Score=49.07 Aligned_cols=66 Identities=15% Similarity=-0.009 Sum_probs=46.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-cccCCCcceeeecCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-NKESKAVDHLVNTAS 119 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-~~~~g~iDvlVnnAg 119 (349)
.+++.|.| .|.+|..+|+.|++.|++|++.+|++++.+...+. +. .....+ .+.....|++|.+..
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g~--~~~~~~~~e~~~~aDvvi~~vp 73 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE----GA--CGAAASAREFAGVVDALVILVV 73 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TC--SEEESSSTTTTTTCSEEEECCS
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc----CC--ccccCCHHHHHhcCCEEEEECC
Confidence 34677776 58999999999999999999999998887765542 11 111222 233456788887653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 349 | ||||
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 1e-33 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 2e-29 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 2e-28 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 3e-28 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 7e-28 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 2e-27 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 1e-26 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 4e-26 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 8e-26 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 2e-25 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 2e-25 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 9e-25 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 2e-24 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 4e-24 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 4e-23 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 7e-23 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 1e-22 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 1e-22 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 2e-22 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 3e-22 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 1e-21 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-21 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 2e-21 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 4e-21 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 5e-21 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 9e-21 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 1e-20 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-20 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 2e-20 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 3e-20 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 4e-20 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 6e-20 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 6e-20 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 6e-19 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 7e-19 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 1e-18 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 2e-18 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 2e-18 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 2e-18 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 2e-18 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 9e-18 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 9e-18 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 3e-17 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 5e-17 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 2e-16 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 3e-16 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-16 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 4e-16 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 5e-16 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 5e-16 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 8e-16 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 2e-15 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 3e-15 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 6e-15 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 2e-14 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 4e-14 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 6e-13 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 5e-12 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 5e-12 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-11 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 4e-11 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 2e-09 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 1e-07 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 6e-07 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 2e-06 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 9e-06 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 1e-04 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 4e-04 |
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 1e-33
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 31/268 (11%)
Query: 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN--E 97
F E ++ K VI+TGAS IG ++AY AK A++V+ AR + LQ + +
Sbjct: 7 FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQ-KVVSHCLELGAAS 65
Query: 98 VTLVSLNNKESKAVDHLVNTA-------------SLGHTFFFEEVTDTSIFPRLLDINFW 144
++ ++ + V A + +T D + +++NF
Sbjct: 66 AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFL 125
Query: 145 GNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDE 203
V T ALP L +SNG +VV +S+ + P ++ Y+++K AL F+ S+R E
Sbjct: 126 SYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSR 185
Query: 204 VGITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261
V ++I G I E VH+ P E+ A I+ G
Sbjct: 186 VNVSITLCVLGLIDTETAMKAV------------SGIVHMQAAPKEECALEIIKGGALRQ 233
Query: 262 TYVKFPSWYDVFLLYRVFAPHVLNWTFR 289
V + S LL R + +L + +
Sbjct: 234 EEVYYDSSLWTTLLIRNPSRKILEFLYS 261
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (278), Expect = 2e-29
Identities = 53/246 (21%), Positives = 94/246 (38%), Gaps = 34/246 (13%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--------------GST 88
+++ ++V+ITGA IG AYE+AK K+ LVL ++ L+
Sbjct: 3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62
Query: 89 IDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+D N + + E V LVN A + +T D + ++N + +
Sbjct: 63 VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQ-IEKTFEVNVLAHFW 121
Query: 149 PTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL--NDEVG 205
T LP + ++N G +V AS + +P + Y S+K A V F+++L EL G
Sbjct: 122 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 181
Query: 206 ITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263
+ ++ K G ++ E+ ++ G
Sbjct: 182 VKTTCLCPNFVNTGFIKNP-STSLGPTLE-------------PEEVVNRLMHGILTEQKM 227
Query: 264 VKFPSW 269
+ PS
Sbjct: 228 IFIPSS 233
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (273), Expect = 2e-28
Identities = 44/236 (18%), Positives = 79/236 (33%), Gaps = 29/236 (12%)
Query: 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--GSTIDEYNPINEVTL 100
E D++ ++TGAS IG +A ++ +V AR ++ + +
Sbjct: 6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 65
Query: 101 VSLN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
+ + VD +N A L + + + + ++N
Sbjct: 66 YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSG-WKDMFNVNVLAL 124
Query: 147 VYPTFVALPYLHESN---GRVVVNASV--ENWLPLPRMSLYASAKAALVTFYESLRFELN 201
T A + E N G ++ S+ LPL Y++ K A+ E LR EL
Sbjct: 125 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 184
Query: 202 D-EVGITIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ + I G + + L D + E P ED A ++
Sbjct: 185 EAQTHIRATCISPGVVETQFAFK---LHDKDPEKAAATYEQMKCLKP-EDVAEAVI 236
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 108 bits (272), Expect = 3e-28
Identities = 50/240 (20%), Positives = 83/240 (34%), Gaps = 23/240 (9%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----------GSTIDEY 92
++ + V+ITG +S +G + + A + ++ + RL G D
Sbjct: 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVR 61
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSI----FPRLLDINFWGNVY 148
+ ++ S +D L+ A + F + IN G ++
Sbjct: 62 SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121
Query: 149 PTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
LP L S G V+ S + P LY +AK A+V L FEL V +
Sbjct: 122 AVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNG 181
Query: 209 ATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG-------GPVEDFARLIVSGACRGD 261
G I ++ G L G++ + VE++ V A RGD
Sbjct: 182 VGSGGINSDLR-GPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGD 240
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (268), Expect = 7e-28
Identities = 49/223 (21%), Positives = 83/223 (37%), Gaps = 15/223 (6%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ----------GSTIDEYNPI 95
KVV++TG IG I + A +V+ + E+ + D
Sbjct: 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQED 64
Query: 96 NEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155
+ TLVS + +D +VN A E T F +LL++N G T +ALP
Sbjct: 65 DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP 124
Query: 156 YLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT--HGW 213
YL +S G V+ +S+ + + Y + K A+ ++L + + G+ + G
Sbjct: 125 YLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPY-GVRVNCISPGN 183
Query: 214 IGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
I + + L +E G G + V
Sbjct: 184 IWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAV 226
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 106 bits (265), Expect = 2e-27
Identities = 41/232 (17%), Positives = 75/232 (32%), Gaps = 16/232 (6%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPINEVTLVS 102
++ +K VI A IG + E KR ++ R + + NP +T +
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 103 LN-NKESKAVDHLVNTA-----SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156
+ L+ ++ + D R + INF G V T L +
Sbjct: 62 YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDF 121
Query: 157 LHESN----GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT-- 210
+ G + SV + + ++ +Y+++KAA+V+F SL G+T +
Sbjct: 122 WDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT-GVTAYSIN 180
Query: 211 HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262
G + D E + E + V
Sbjct: 181 PGITRTPLVHTFNSWLD--VEPRVAELLLSHPTQTSEQCGQNFVKAIEANKN 230
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 103 bits (259), Expect = 1e-26
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 15/222 (6%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ--------GSTIDEYNPINE 97
K V++TG + IG IA +A+ A + L R + +D +
Sbjct: 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERER 63
Query: 98 VTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL 157
V V VD LVN A++ V + R+L++N ++ + +A +
Sbjct: 64 VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPE-WRRVLEVNLTAPMHLSALAAREM 122
Query: 158 HESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT--HGWI 214
+ G +VN ASV+ + Y ++K LV SL +L I + G I
Sbjct: 123 RKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPL-RIRVNAVAPGAI 181
Query: 215 GIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
E L E ++ ++H G E+ A ++
Sbjct: 182 ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL 223
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 102 bits (255), Expect = 4e-26
Identities = 40/227 (17%), Positives = 85/227 (37%), Gaps = 20/227 (8%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
++ KV ++TG +S +G ++ A + E Q E + ++
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQ-QLAAELGERSMFVRHDVS 62
Query: 105 NKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
++ ++ LVN A + E F RLL IN
Sbjct: 63 SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLED-FSRLLKINTESVFIGCQQ 121
Query: 153 ALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL---NDEVGITIA 209
+ + E+ G ++ ASV +WLP+ + + Y+++KAA+ + + +
Sbjct: 122 GIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSI 181
Query: 210 THGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
I M + + + ++ + +++ AG E A+L++
Sbjct: 182 HPDGIYTPMMQ-ASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVL 227
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 101 bits (253), Expect = 8e-26
Identities = 43/225 (19%), Positives = 80/225 (35%), Gaps = 19/225 (8%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
++DK+ +ITG ++ IG IA +A A++ + + I ++
Sbjct: 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 62
Query: 105 NKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
D LVN A + F+E+T + + +IN
Sbjct: 63 QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQ-WKKTFEINVDSGFLMAKA 121
Query: 153 ALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT- 210
+P + + GR++ S WL + + Y S KAA + F +L +L + GIT+
Sbjct: 122 FVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKD-GITVNAI 180
Query: 211 -HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ T+ L ++ + + P D
Sbjct: 181 APSLVRTATTEA-SALSAMFDVLPNMLQAIPRLQVP-LDLTGAAA 223
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 100 bits (251), Expect = 2e-25
Identities = 43/232 (18%), Positives = 89/232 (38%), Gaps = 24/232 (10%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLV 101
S ++ KV IITG + IG IA ++ + A +++ R + + +++
Sbjct: 1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE-KAAKSVGTPDQIQFF 59
Query: 102 SLN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
+ K V LVN A + EE T + + +LL +N G
Sbjct: 60 QHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTT-AEWRKLLAVNLDGVF 118
Query: 148 YPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN-DEV 204
+ T + + + ++ +S+E ++ P + Y ++K A+ +S + +
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 205 GITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ + T G+I + + M + + + G P D A + V
Sbjct: 179 DVRVNTVHPGYIKTPLVDD--LPGAEEAMSQRTKTPMGHIGEP-NDIAYICV 227
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (251), Expect = 2e-25
Identities = 49/223 (21%), Positives = 79/223 (35%), Gaps = 18/223 (8%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+ + V++TGA IG A +V V+R + L S + E I V V L
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD-SLVRECPGIEPVC-VDL 61
Query: 104 NNKES--------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155
+ E+ VD LVN A++ F EVT F R ++N + + +
Sbjct: 62 GDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTK-EAFDRSFEVNLRAVIQVSQIVAR 120
Query: 156 YLHESNG--RVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATH-- 211
L +V +S + + S+Y S K AL + + EL I +
Sbjct: 121 GLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPH-KIRVNAVNP 179
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ M + D + + R VE I+
Sbjct: 180 TVVMTSMGQA--TWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL 220
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 99.3 bits (247), Expect = 9e-25
Identities = 48/238 (20%), Positives = 88/238 (36%), Gaps = 31/238 (13%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----------------GST 88
+KV IITG+S+ IG A +A+ A + + R RL+
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63
Query: 89 IDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEV---TDTSIFPRLLDINFWG 145
D + ++S + +D LVN A + + L++N
Sbjct: 64 ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123
Query: 146 NVYPTFVALPYLHESNGRVVVNASVENWL-PLPRMSLYASAKAALVTFYESLRFELNDEV 204
+ T A+P+L + G +V +S+ + L P Y+ AKAA+ + + +L
Sbjct: 124 VIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQH- 182
Query: 205 GITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPV------EDFARLIV 254
GI + + G + M E+ ++ ++ P +D A +I
Sbjct: 183 GIRVNSISPGLVATGFGSAMGMPEETSK-KFYSTMATMKECVPAGVMGQPQDIAEVIA 239
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 97.7 bits (243), Expect = 2e-24
Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 18/223 (8%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
N ++TGA IG A +V V R + L S E I V V L
Sbjct: 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV-SLAKECPGIEPVC-VDL 59
Query: 104 NNKES--------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155
+ ++ VD LVN A+L F E F R +N + +
Sbjct: 60 GDWDATEKALGGIGPVDLLVNNAALVIMQPFLE-VTKEAFDRSFSVNLRSVFQVSQMVAR 118
Query: 156 YLHE--SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT--H 211
+ G +V +S+ + P + Y+S K A+ +++ EL I + +
Sbjct: 119 DMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPH-KIRVNSVNP 177
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ +M K + A + KE + ED I+
Sbjct: 178 TVVLTDMGKKVSADPEFAR-KLKERHPLRKFAEV-EDVVNSIL 218
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 97.4 bits (242), Expect = 4e-24
Identities = 59/238 (24%), Positives = 93/238 (39%), Gaps = 31/238 (13%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------GSTIDEYNPIN 96
+K VIITG+S+ IG A +A+ AN+ + R RL+ G + + N +
Sbjct: 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63
Query: 97 -EVT-------LVSLNNKESKAVDHLVNTASLGHTFFFEEVT---DTSIFPRLLDINFWG 145
+VT +++ K+ +D LVN A F I+ + L +N
Sbjct: 64 ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123
Query: 146 NVYPTFVALPYLHESNGRVVVNA-SVENWLPLPRMSLYASAKAALVTFYESLRFELNDEV 204
+ T P+L S G +V + V P YA AKAAL + S +L
Sbjct: 124 VIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKF- 182
Query: 205 GITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPV------EDFARLIV 254
GI + + G + T M D A ++ H P+ E A +I+
Sbjct: 183 GIRVNSVSPGMVETGFTNAMGM-PDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 239
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 94.1 bits (233), Expect = 4e-23
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 24/227 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----------GSTIDEY 92
N E K+ ++TGAS IG IA A R A ++ A EN Q G ++
Sbjct: 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVT 60
Query: 93 NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+P + +++ E VD LVN A + + D ++ N +
Sbjct: 61 DPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDI-IETNLSSVFRLSKA 119
Query: 153 ALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATH 211
+ + + GR++ SV + + YA+AKA L+ F +SL E+ GIT+
Sbjct: 120 VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASR-GITVNVV 178
Query: 212 --GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
G+I +MT+ Q AG G ++ A +
Sbjct: 179 APGFIETDMTRALSD------DQRAGILAQVPAGRLGGAQEIANAVA 219
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 94.0 bits (233), Expect = 7e-23
Identities = 42/231 (18%), Positives = 84/231 (36%), Gaps = 24/231 (10%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
++DKV IITG + IGE A + + A +V+ ++ Q + + ++ V +
Sbjct: 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQ-KVCNNIGSPDVISFVHCD 62
Query: 105 --------------NKESKAVDHLVNTASLGHTFFFE-EVTDTSIFPRLLDINFWGNVYP 149
+ +D + + T + F R++DIN +G
Sbjct: 63 VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122
Query: 150 TFVALPY-LHESNGRVVVNASVENWLP-LPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
A + G +V AS+ ++ +Y + K A++ SL EL + GI
Sbjct: 123 AKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY-GIR 181
Query: 208 IATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ + + D + ++ + ++ G ED A +
Sbjct: 182 VNCVSPYIVASPLLT-DVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVA 231
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.8 bits (230), Expect = 1e-22
Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 15/221 (6%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ------GSTIDEYNPINEVT 99
+ KV+I+T A+ IG+ A +A+ A ++ E++LQ G + +
Sbjct: 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQ 64
Query: 100 LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE 159
+ E + +D L N A H + + + +++N LP +
Sbjct: 65 IDQ-FANEVERLDVLFNVAGFVHHGTVLDCEEKD-WDFSMNLNVRSMYLMIKAFLPKMLA 122
Query: 160 SN-GRVVVNASVENWL-PLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT--HGWIG 215
G ++ +SV + + + +Y++ KAA++ +S+ + + GI G +
Sbjct: 123 QKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ-GIRCNCVCPGTVD 181
Query: 216 IEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ + E + + G E+ A L V
Sbjct: 182 TPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCV 222
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 93.1 bits (231), Expect = 1e-22
Identities = 46/230 (20%), Positives = 87/230 (37%), Gaps = 21/230 (9%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLV 101
N+E ++TG S IG I E A A++ +R + L + E ++
Sbjct: 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVC 64
Query: 102 SLNNKES-------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
L+++ ++ LVN A + ++ T + ++ INF +
Sbjct: 65 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-YSLIMSINFEAAYH 123
Query: 149 PTFVALPYLHESNG-RVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
+ +A P+L S VV +SV L +P ++Y + K A+ L FE + I
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD-NIR 182
Query: 208 IATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVA-GGPVEDFARLIV 254
+ G I + + + E K + G ++ A ++
Sbjct: 183 VNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVA 232
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.8 bits (230), Expect = 2e-22
Identities = 35/228 (15%), Positives = 83/228 (36%), Gaps = 24/228 (10%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVSLNN 105
KV ++TGA+ IG A + A + LV + + E + + +
Sbjct: 4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV 63
Query: 106 KESKAVDHLVNTA-----SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES 160
+ + + L V + + + L IN + T++ L Y+ +
Sbjct: 64 ADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQ 123
Query: 161 N----GRVVVNASVENWLPLPRMSLYASAKAALVTF--YESLRFELNDEVGITIAT--HG 212
N G ++ +S+ +P+ + +Y ++K +V F +L L + G+ + G
Sbjct: 124 NGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS-GVRLNAICPG 182
Query: 213 WIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPV------EDFARLIV 254
++ + + + ++ Q+ E ++ A ++
Sbjct: 183 FVNTAILES--IEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI 228
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 92.0 bits (228), Expect = 3e-22
Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 29/236 (12%)
Query: 38 NNFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN- 96
N +Y E+KV ++TGA IG +IA AK ++++ ++R + S +DE
Sbjct: 3 NYYYC--GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD-SVVDEIKSFGY 59
Query: 97 EVTLVSLNNKESKAVDHLVNTA---------SLGHTFFFEEVTDTSIFPRLLDINFWGNV 147
E + + + + + + ++N + + + + + N+
Sbjct: 60 ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNL 119
Query: 148 YPTFVAL-----PYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
F ++ GR++ +S+ + Y+S+KA ++ F +SL EL
Sbjct: 120 NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 179
Query: 203 EVGITIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
IT+ G+I +MT E K AG G E+ A L
Sbjct: 180 R-NITVNAIAPGFISSDMTDKIS------EQIKKNIISNIPAGRMGTPEEVANLAC 228
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 90.4 bits (224), Expect = 1e-21
Identities = 44/226 (19%), Positives = 78/226 (34%), Gaps = 21/226 (9%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
++ K VIITG + +G + A + A +VL + +T E + +
Sbjct: 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA-ATARELGDAARYQHLDV 60
Query: 104 NNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
+E +VD LVN A T F E F ++++IN G
Sbjct: 61 TIEEDWQRVVAYAREEFGSVDGLVNNAG-ISTGMFLETESVERFRKVVEINLTGVFIGMK 119
Query: 152 VALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT 210
+P + ++ G +V +S + L S Y ++K + + EL + I + +
Sbjct: 120 TVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR-IRVNS 178
Query: 211 H--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
G MT + G + A +V
Sbjct: 179 VHPGMTYTPMTAE---TGIRQGEGNYPNTPMGRVGNEPGEIAGAVV 221
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 90.1 bits (223), Expect = 1e-21
Identities = 48/225 (21%), Positives = 81/225 (36%), Gaps = 23/225 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
++DK V+ITGA+ IG +AK A LV E L+ + V V+
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLR-EAAEAVGAHPVVMDVAD 60
Query: 104 NN----------KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
+D +V+ A + F ++ + +L +N G+ A
Sbjct: 61 PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLED-WELVLRVNLTGSFLVAKAA 119
Query: 154 LPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT--H 211
+ E N +V + +L + YA++ A +V +L EL GI + T
Sbjct: 120 SEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRW-GIRVNTLAP 178
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
G+I MT E ++ G G + A +
Sbjct: 179 GFIETRMT------AKVPEKVREKAIAATPLGRAGKPLEVAYAAL 217
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 90.1 bits (223), Expect = 2e-21
Identities = 44/235 (18%), Positives = 77/235 (32%), Gaps = 27/235 (11%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----------------GST 88
K VIITG+S+ IG A +AK A + + R E+RL+
Sbjct: 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62
Query: 89 IDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNV 147
D + +++ + +D LVN A ++ + +NF +
Sbjct: 63 ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122
Query: 148 Y-PTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+ V V++ V YA AKAAL + +L G+
Sbjct: 123 EMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH-GV 181
Query: 207 TIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVA-----GGPVEDFARLIV 254
+ + G + + E ++ + G E+ A +IV
Sbjct: 182 RVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIV 236
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 90.0 bits (223), Expect = 4e-21
Identities = 42/234 (17%), Positives = 82/234 (35%), Gaps = 39/234 (16%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS--------TIDEYNPI 95
+ +VV++TGA +G A +A+R A +V+ + ++E
Sbjct: 4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63
Query: 96 NEVTLVSLNNKESKA------------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINF 143
+ + ++ E+ +D +VN A + F ++D + + ++
Sbjct: 64 GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDED-WDIIQRVHL 122
Query: 144 WGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
G+ T A ++ + N GR+++ AS + Y++AK L+ +L E
Sbjct: 123 RGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRK 182
Query: 203 EVGITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
I T M ED E E A L++
Sbjct: 183 N-NIHCNTIAPNAGSRMTETV--MPEDLVEA------------LKPEYVAPLVL 221
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 88.9 bits (220), Expect = 5e-21
Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 23/229 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLV 101
+++ K V++TG + IG I E+A A + AR E L S + ++
Sbjct: 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVC 64
Query: 102 SLNNKESKA-------------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ + + +D L+N + + T F + N +
Sbjct: 65 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAED-FSFHISTNLESAYH 123
Query: 149 PTFVALPYLHESNGRVVVNASVENWL-PLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
+ +A P L S ++ S + S+Y++ K AL +L E + GI
Sbjct: 124 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD-GIR 182
Query: 208 IAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
I + + + +D + + + G P E+ + L+
Sbjct: 183 ANAVAPAVIATPLAEA--VYDDEFKKVVISRKPLGRFGEP-EEVSSLVA 228
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 87.9 bits (217), Expect = 9e-21
Identities = 43/230 (18%), Positives = 84/230 (36%), Gaps = 20/230 (8%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLV 101
+++ ++TG S IG I E A A + +R E L E E ++
Sbjct: 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVC 62
Query: 102 SLNNKES-------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
L ++ ++ LVN A + ++ T+ + ++ NF +
Sbjct: 63 DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKD-YNIIMGTNFEAAYH 121
Query: 149 PT-FVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGI 206
+ NG V+ +S+ + LP +SLY+++K A+ +SL E D + +
Sbjct: 122 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 181
Query: 207 TIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
G I + + + + G G ++ + LI
Sbjct: 182 NSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA 231
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 87.9 bits (217), Expect = 1e-20
Identities = 53/232 (22%), Positives = 80/232 (34%), Gaps = 24/232 (10%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVSL 103
D+VV+ITG S +G A A A L LV L+ + + E P EV
Sbjct: 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62
Query: 104 N--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
+ + +D N A + E + F +++ IN G
Sbjct: 63 DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 122
Query: 150 TFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITI 208
L + E G VV ASV + S YA+AK +V + E GI I
Sbjct: 123 LEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRY-GIRI 181
Query: 209 ATH--GWIGIEMTKGKFMLEDGAEMQWKEER--EVHVAG--GPVEDFARLIV 254
G I M + D + E +V+ + G + A ++
Sbjct: 182 NAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVA 233
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 86.6 bits (214), Expect = 2e-20
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 9/213 (4%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
+ DK V++ AS IG +A ++ A + + AR E L+ + Y + + L
Sbjct: 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK-RSGHRYVVCDLRKDLDLL 60
Query: 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT-FVALPYLHESNGR 163
++ K VD LV A FF+E F +D F + + GR
Sbjct: 61 FEKVKEVDILVLNAGGPKAGFFDE-LTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGR 119
Query: 164 VVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT--HGWIGIEMTKG 221
+V S P+ + SA+ AL F ++L FE+ GIT+ GW E K
Sbjct: 120 IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPY-GITVNCVAPGWTETERVKE 178
Query: 222 KFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+L + + Q + + + P E+ A ++
Sbjct: 179 --LLSEEKKKQVESQIPMRRMAKP-EEIASVVA 208
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 86.7 bits (214), Expect = 2e-20
Identities = 37/214 (17%), Positives = 75/214 (35%), Gaps = 10/214 (4%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---GSTIDEYNPINEVTLVS 102
+ V++TG + IG IA A + + R + G +D + +
Sbjct: 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFT 65
Query: 103 LNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNG 162
+ V+ LV+ A L F +T+ + + G
Sbjct: 66 AVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFG 125
Query: 163 RVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT--HGWIGIEMTK 220
R++ SV + + YA++KA ++ S+ E + +T G+I +MT+
Sbjct: 126 RMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARE-LSKANVTANVVAPGYIDTDMTR 184
Query: 221 GKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
L++ + + G P + A ++
Sbjct: 185 A---LDERIQQGALQFIPAKRVGTP-AEVAGVVS 214
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 86.3 bits (213), Expect = 3e-20
Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 26/232 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINE---------- 97
KV + TGA IG IA E +R A++V+ ++ + E +
Sbjct: 7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS 66
Query: 98 -----VTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
V L +D +++ + + EVT +F ++ ++N G +
Sbjct: 67 KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQ-ELFDKVFNLNTRGQFFVAQQ 125
Query: 153 ALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATH 211
L + ++ ++ +P +LYA +KAA+ F + + + V +
Sbjct: 126 GLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAP 185
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVA---------GGPVEDFARLIV 254
G + +M + + ++ G D R +
Sbjct: 186 GGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS 237
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 85.9 bits (212), Expect = 4e-20
Identities = 44/223 (19%), Positives = 85/223 (38%), Gaps = 20/223 (8%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVSLNNK 106
VV++TGAS IG+ IA K +++ R + + + +
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 107 ESKAVDHLVNTA-------------SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
+ V+ ++ TA + S + ++D+N G T A
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 154 LPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGITIATH 211
+ + GR++ ASV + + YA+AKA ++ F ++ E + + + +
Sbjct: 122 TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCP 181
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
G+I +MT L + E + + G P E+ A L+
Sbjct: 182 GFIASDMTAK---LGEDMEKKILGTIPLGRTGQP-ENVAGLVE 220
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 85.7 bits (211), Expect = 6e-20
Identities = 36/225 (16%), Positives = 73/225 (32%), Gaps = 41/225 (18%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLVS 102
M V++TGA+ IG + + K K +++ AR + + V ++
Sbjct: 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-ELKSIKDSRVHVLPLT 59
Query: 103 LNNKES--------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ +S + L+N A + ++ + ++ LD+N V
Sbjct: 60 VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119
Query: 149 PTFVALPYLHESNGRVVVN-------------------ASVENWLPLPRMSLYASAKAAL 189
T LP L + + + + + Y +KAA+
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179
Query: 190 VTFYESLRFELNDEVGITIATH--GWIGIEMTKGKFML--EDGAE 230
F +L +L D+ + + GW+ + L E
Sbjct: 180 NMFGRTLAVDLKDD-NVLVVNFCPGWVQTNLGGKNAALTVEQSTA 223
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 85.6 bits (211), Expect = 6e-20
Identities = 42/256 (16%), Positives = 89/256 (34%), Gaps = 39/256 (15%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRK---ANLVLVARRENRLQG--STIDEYNPIN 96
++ + V ++TGAS G +A + A+ + +++ AR E+ L+ + P
Sbjct: 1 ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60
Query: 97 EVTLVSLNNKESKAV------------------DHLVNTASLGHTFFFEEVTDTSI--FP 136
+V L + + V L+N A+ + +
Sbjct: 61 KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120
Query: 137 RLLDINFWGNVYPTFVALPYLHESN---GRVVVNASVENWLPLPRMSLYASAKAALVTFY 193
+N + T L +S VV +S+ P LY + KAA Y
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180
Query: 194 ESLRFELNDEVGITIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPV---ED 248
+ L E + + + G + +M + E + + + + + + G +
Sbjct: 181 QVLAAEEP---SVRVLSYAPGPLDNDMQQL--ARETSKDPELRSKLQKLKSDGALVDCGT 235
Query: 249 FARLIVSGACRGDTYV 264
A+ ++ + DT+
Sbjct: 236 SAQKLLGLLQK-DTFQ 250
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.4 bits (205), Expect = 6e-19
Identities = 48/243 (19%), Positives = 81/243 (33%), Gaps = 34/243 (13%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVAR------RENRLQGSTIDEYNPINEVTLV 101
VV+ITG SS IG +A A + V + RL + P + +
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 102 SLNNKESKAVDHL-----------VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPT 150
L+ ++SK+V + + E +LD+N G V
Sbjct: 63 QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122
Query: 151 FVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIA 209
LP + GRV+V SV + LP +Y ++K AL ESL L G+ ++
Sbjct: 123 QAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF-GVHLS 181
Query: 210 TH--GWIGIEMTKGKFM-------------LEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
G + + + ++ A E+ A + +
Sbjct: 182 LIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFL 241
Query: 255 SGA 257
+
Sbjct: 242 TAL 244
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 82.8 bits (204), Expect = 7e-19
Identities = 42/230 (18%), Positives = 91/230 (39%), Gaps = 23/230 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST---IDEYNPINEVTL 100
++ +V ++TG S +G IA A+ ++V+ +R + ++Y
Sbjct: 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 61
Query: 101 VSLNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFW--GN 146
++N E +D +VN A + EE F +++++N +
Sbjct: 62 CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPL-DEFRQVIEVNLFGTYY 120
Query: 147 VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
V +L ++ + + + + +P +S YA++K + + ++L E GI
Sbjct: 121 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRY-GI 179
Query: 207 TIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ GW +MT+ + D ++ + +R G ED + V
Sbjct: 180 RVNVIAPGWYRTKMTEA--VFSDPEKLDYMLKRIPLGRTGVPEDLKGVAV 227
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 81.8 bits (201), Expect = 1e-18
Identities = 26/228 (11%), Positives = 59/228 (25%), Gaps = 22/228 (9%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI------DEYNPINEVT 99
E + V++ G +G + + R + + EN +++ ++VT
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVT 60
Query: 100 LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE 159
+ VD ++ A + + + + W + + +
Sbjct: 61 AEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSH-LATKHLK 119
Query: 160 SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL---NDEVGITIATHGWIGI 216
G + + + P M Y AK A+ +SL + +
Sbjct: 120 EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT 179
Query: 217 EMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264
M + D + P+E
Sbjct: 180 PMNRKSMPEADFSSW------------TPLEFLVETFHDWITGNKRPN 215
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 81.8 bits (201), Expect = 2e-18
Identities = 41/238 (17%), Positives = 82/238 (34%), Gaps = 30/238 (12%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVSL 103
KV ++TGA +IG A A+ + L+ L+ +++ E + +
Sbjct: 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDV 63
Query: 104 NNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
++E+ +D L N A F + + F R+L IN G +
Sbjct: 64 TSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLK 123
Query: 152 VALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT 210
+ GR+V AS+ P M+ Y ++K A++ E+ +L I +
Sbjct: 124 AVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPY-NIRVNA 182
Query: 211 H--GWIGIEMTKGKF------MLEDGAEMQWKEEREVHVAGGP------VEDFARLIV 254
G++G + + K + + P + + ++
Sbjct: 183 ISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 240
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 81.0 bits (199), Expect = 2e-18
Identities = 42/220 (19%), Positives = 75/220 (34%), Gaps = 15/220 (6%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-----RLQGSTIDEYNPINEVTLV 101
++ ++TG +S +G A R +V++ R ++G E + V
Sbjct: 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARA 60
Query: 102 SLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-- 159
V + E F R+L++N G +A + E
Sbjct: 61 QEEAPLFAVVSAAGVGLA-EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENP 119
Query: 160 -----SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWI 214
G +V ASV + + YA++K +V EL GI + T
Sbjct: 120 PDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW-GIRVVT-VAP 177
Query: 215 GIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
G+ T L + A+ + G E++A L++
Sbjct: 178 GLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVL 217
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 81.4 bits (200), Expect = 2e-18
Identities = 34/229 (14%), Positives = 74/229 (32%), Gaps = 20/229 (8%)
Query: 44 NMEDKVVIITGASSD--IGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT-- 99
++ K ++ G ++ +G IA + + A + L + E + +
Sbjct: 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFR 64
Query: 100 -----------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFP---RLLDINFWG 145
L + + +D+LV+ + E + L+++ +
Sbjct: 65 ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124
Query: 146 NVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
V A P L E G +V + +P+ ++ A AKAAL L +EL + G
Sbjct: 125 LVAVARRAEPLLRE-GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPK-G 182
Query: 206 ITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ + + + + + E+ L +
Sbjct: 183 VRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGL 231
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.0 bits (202), Expect = 2e-18
Identities = 44/231 (19%), Positives = 81/231 (35%), Gaps = 25/231 (10%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT------ 99
+ +V I+TG ++ IG+ I E + +N+V+ +R+ RL+ S DE T
Sbjct: 11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK-SAADELQANLPPTKQARVI 69
Query: 100 --------------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG 145
LV ++ LVN E ++ + +L+ N G
Sbjct: 70 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISS-KGWHAVLETNLTG 128
Query: 146 NVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
Y + +G +VN V P +A+A + +SL E G
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACS-G 187
Query: 206 ITIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
I I G I + + + + ++ G E+ + ++
Sbjct: 188 IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVC 238
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 79.8 bits (196), Expect = 9e-18
Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 25/231 (10%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVS 102
++E KVV+ITG+S+ +G+ +A +A KA +V+ R + S ++E + E V
Sbjct: 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 103 LN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
+ KE +D ++N A L + E S + +++D N G
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHE-MSLSDWNKVIDTNLTGAFL 122
Query: 149 PTFVALP--YLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VG 205
+ A+ ++ G V+ +SV +P P YA++K + E+L E + +
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 206 ITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+ G I + KF + Q + + G G E+ A +
Sbjct: 183 VNNIGPGAINTPINAEKFADPE----QRADVESMIPMGYIGEPEEIAAVAA 229
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 79.4 bits (195), Expect = 9e-18
Identities = 43/241 (17%), Positives = 77/241 (31%), Gaps = 39/241 (16%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKAN-------LVLVARRENRLQ--GSTIDEYNPINEV 98
+++ITGA IG IA E+A+ + LVL +R L+ + +
Sbjct: 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61
Query: 99 TLVSLNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
+++ +D LVN A +G ++T+ ++ N G
Sbjct: 62 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYT-MNTNLKGT 120
Query: 147 VYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVG 205
+ T + + G + SV S+Y +K E++R
Sbjct: 121 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKC-N 179
Query: 206 ITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263
+ I G + M K + E+ ED A +V +
Sbjct: 180 VRITDVQPGAVYTPMWG-------------KVDDEMQALMMMPEDIAAPVVQAYLQPSRT 226
Query: 264 V 264
V
Sbjct: 227 V 227
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 78.2 bits (192), Expect = 3e-17
Identities = 39/237 (16%), Positives = 76/237 (32%), Gaps = 32/237 (13%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST---IDEYNPINEVTL 100
+ +K +I+TG + IG A AN+ ++ R T E+ +
Sbjct: 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65
Query: 101 VSLNNKES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWG--N 146
++N + + L+ A + E+T F + D+N +G N
Sbjct: 66 CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTH-EDFAFVYDVNVFGVFN 124
Query: 147 VYPTFVALPYLHESNGRVVVNA-------SVENWLPLPRMSLYASAKAALVTFYESLRFE 199
L + G +VV + + + Y S+KAA + L E
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184
Query: 200 LNDEVGITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
GI + G++ + T ++ ++ P E+ +
Sbjct: 185 WASA-GIRVNALSPGYVNTDQTAH---MDKKIRDHQASNIPLNRFAQP-EEMTGQAI 236
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 77.5 bits (190), Expect = 5e-17
Identities = 43/239 (17%), Positives = 84/239 (35%), Gaps = 28/239 (11%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTL 100
S ++E KV ++TGA IG ++A E +R +++ + +
Sbjct: 13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC 72
Query: 101 VSLN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
V N K +D + + + + ++VT F R+ IN G
Sbjct: 73 VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQ 131
Query: 147 VYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
+ A +L +++ + +P+ ++Y+ +K A+ TF + ++ D+ I
Sbjct: 132 FFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADK-KI 190
Query: 207 TIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG---------GPVEDFARLIV 254
T+ G I +M E A G D AR++
Sbjct: 191 TVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVC 249
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 75.5 bits (185), Expect = 2e-16
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 27/235 (11%)
Query: 40 FYSENM--EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN- 96
F S+N+ + K IITGA + IG++IA +A A++V+ + +DE +
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVVDEIQQLGG 60
Query: 97 EVTLVSLN--------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDIN 142
+ + + VD LVN A G F+ + F R ++N
Sbjct: 61 QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFD--MPMADFRRAYELN 118
Query: 143 FWGNVYPTFVALPYLHESNGRVVVN-ASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201
+ + + + P + ++ G V++ S+ M+ YAS+KAA ++ F+L
Sbjct: 119 VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG 178
Query: 202 DEVGITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
++ I + G I + K ++ E + + + G P +D A +
Sbjct: 179 EK-NIRVNGIAPGAILTDALKS--VITPEIEQKMLQHTPIRRLGQP-QDIANAAL 229
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.7 bits (185), Expect = 3e-16
Identities = 36/172 (20%), Positives = 58/172 (33%), Gaps = 19/172 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEY-------------- 92
V ++TG + IG I + + ++VL AR R Q + + +
Sbjct: 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQ-AAVQQLQAEGLSPRFHQLDI 62
Query: 93 -NPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTF 151
+ + L KE +D LVN A + + NF+G
Sbjct: 63 DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ-AEVTMKTNFFGTRDVCT 121
Query: 152 VALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE 203
LP + GRVV +S+ + L S K T E L ++
Sbjct: 122 ELLPLIKPQ-GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNK 172
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 74.5 bits (182), Expect = 4e-16
Identities = 29/223 (13%), Positives = 63/223 (28%), Gaps = 22/223 (9%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI------DEYNPINEVTLVSL 103
VI+ G +G I + K ++ + N S I + + +
Sbjct: 5 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTA 64
Query: 104 NNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGR 163
++ + VD + A ++ + W + +A + + G
Sbjct: 65 SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTH-LKPGGL 123
Query: 164 VVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL---NDEVGITIATHGWIGIEMTK 220
+ + + P P M Y AKAA+ SL + D + + M +
Sbjct: 124 LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR 183
Query: 221 GKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263
D + P+ + ++ +
Sbjct: 184 KWMPNADHSSW------------TPLSFISEHLLKWTTETSSR 214
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 74.7 bits (183), Expect = 4e-16
Identities = 44/225 (19%), Positives = 82/225 (36%), Gaps = 27/225 (12%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN 105
K +++TGA+S IG +A+ A+LV V R E L + + +++
Sbjct: 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA-EAVAALEAEAIAVVADVSD 62
Query: 106 KES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
++ + + + A + H+ + ++L +N G+ A
Sbjct: 63 PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWN-LPLEAWEKVLRVNLTGSFLVARKA 121
Query: 154 LPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT--H 211
L E V+ L ++ YA+ K +V +L EL + G+ +
Sbjct: 122 GEVLEEGGSLVLT--GSVAGLGAFGLAHYAAGKLGVVGLARTLALELARK-GVRVNVLLP 178
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
G I MT G W++E G G E+ A+ +
Sbjct: 179 GLIQTPMTAGLP------PWAWEQEVGASPLGRAGRPEEVAQAAL 217
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 74.3 bits (182), Expect = 5e-16
Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 25/223 (11%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN 105
KV +++G + +G A +V + + + E + +
Sbjct: 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGK-AMAAELADAARYVHLDVTQ 63
Query: 106 KES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
+ LVN A + + E+ + + R+LD+N G
Sbjct: 64 PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYAL-TEWQRILDVNLTGVFLGIRAV 122
Query: 154 LPYLHESNGR-VVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATH 211
+ + E+ ++ +S+E Y + K A+ +S EL + +
Sbjct: 123 VKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHP 182
Query: 212 GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
G + MT + ED + + + L+V
Sbjct: 183 GLVKTPMTDW--VPEDIFQTALGR-------AAEPVEVSNLVV 216
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 74.4 bits (182), Expect = 5e-16
Identities = 45/234 (19%), Positives = 78/234 (33%), Gaps = 30/234 (12%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPIN-EVTLVSLN-- 104
+V ++TGA+S IG +IA K + + AR E L+ +T+ E E + +
Sbjct: 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR-TTLKELREAGVEADGRTCDVR 61
Query: 105 ------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFV 152
+ VD LVN A E ++ +++ N G T
Sbjct: 62 SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAE-LADELWLDVVETNLTGVFRVTKQ 120
Query: 153 ALPYLHESNGRVVVN---ASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIA 209
L AS + + Y+++K +V F ++L EL GIT+
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART-GITVN 179
Query: 210 TH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG-------GPVEDFARLIV 254
G++ M EE + + A ++
Sbjct: 180 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA 233
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 74.1 bits (181), Expect = 8e-16
Identities = 43/235 (18%), Positives = 75/235 (31%), Gaps = 25/235 (10%)
Query: 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
++ KV ++TG++S IG IA A + A++VL + + V ++
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 105 ----------------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVY 148
++ +D LVN A + HT E+ L
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121
Query: 149 PTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFEL-NDEVGIT 207
+ GR++ AS + S Y +AK +V F + E +
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN 181
Query: 208 IATHGWIGIEMTKGKF--MLEDGAEMQWKEEREVHVAGGP------VEDFARLIV 254
GW+ + + + + E Q RE+ P E V
Sbjct: 182 AICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAV 236
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.0 bits (178), Expect = 2e-15
Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 33/236 (13%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ----------------GSTI 89
+ V +ITG +S +G A + A+ VL+ + + ++
Sbjct: 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSE 63
Query: 90 DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
+ + + + AS + + F R+LD+N G
Sbjct: 64 KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNV 123
Query: 150 TFVALPYLHE-------SNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELND 202
+ + + G ++ ASV + + Y+++K +V + +
Sbjct: 124 IRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD-LA 182
Query: 203 EVGITIATH--GWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
+GI + T G G + ++ +V G ++A L+
Sbjct: 183 PIGIRVMTIAPGLFGTPLLTS-----LPEKVCNFLASQVPFPSRLGDPAEYAHLVQ 233
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 72.9 bits (178), Expect = 3e-15
Identities = 46/232 (19%), Positives = 80/232 (34%), Gaps = 22/232 (9%)
Query: 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ---------------G 86
+ + KV ITG + +G+ + + A V+ +R+ + L+
Sbjct: 20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHA 79
Query: 87 STIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGN 146
D +P VS K + + ++N A+ E ++ + + + DI G
Sbjct: 80 IQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNA-WKTITDIVLNGT 138
Query: 147 VYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEV 204
+ T L ++ + ++ + ASAKA + +SL E
Sbjct: 139 AFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKY- 197
Query: 205 GITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG--GPVEDFARLIV 254
G+ G TKG F D KE G G VE+ A L
Sbjct: 198 GMRFNVI-QPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAA 248
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 71.4 bits (174), Expect = 6e-15
Identities = 39/232 (16%), Positives = 79/232 (34%), Gaps = 27/232 (11%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG--STIDEYNPINEVTLVSLNN 105
KV ++TGA IG+ IA K + + + + S I++ V +++
Sbjct: 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61
Query: 106 KES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
++ D +VN A + + E +T + +IN G ++ A
Sbjct: 62 RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKV-YNINVKGVIWGIQAA 120
Query: 154 LPYLHESNGRVVVNASVENW--LPLPRMSLYASAKAALVTFYESLRFELNDEVGITIAT- 210
+ + + + + P +++Y+S+K A+ ++ +L GIT+
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPL-GITVNGY 179
Query: 211 -HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG-------GPVEDFARLIV 254
G + M A + A ED A +
Sbjct: 180 CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVS 231
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 69.8 bits (170), Expect = 2e-14
Identities = 41/231 (17%), Positives = 78/231 (33%), Gaps = 24/231 (10%)
Query: 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN 105
+ K +ITG++ IG A Y + A + + + +T E P + + +
Sbjct: 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAAR-ATAAEIGPAACAIALDVTD 62
Query: 106 KES------------KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
+ S ++D LVN A+L E+T + RL IN G ++
Sbjct: 63 QASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITR-ESYDRLFAINVSGTLFMMQAV 121
Query: 154 LPYLHESNGRVVVNASVEN--WLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIAT 210
+ + + +Y + KAA+++ +S L + +
Sbjct: 122 ARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIA 181
Query: 211 HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAG-------GPVEDFARLIV 254
G + E G E + E++ V G ED + +
Sbjct: 182 PGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAI 232
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 69.2 bits (168), Expect = 4e-14
Identities = 35/237 (14%), Positives = 68/237 (28%), Gaps = 41/237 (17%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE 107
+++I+G ++ IG +V + R+ + + + + K
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEG--RKQAIADVLAKC 59
Query: 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN------ 161
SK +D LV A LG T + ++ +N++G LP L + +
Sbjct: 60 SKGMDGLVLCAGLGP--------QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVV 111
Query: 162 ----------------------GRVVVNASVENWLPLPRMSL-YASAKAALVTF-YESLR 197
G ++ +L YA +K AL +
Sbjct: 112 ISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAA 171
Query: 198 FELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
V + G + + E K + P + A +I
Sbjct: 172 AWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEP-SEMASVIA 227
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 65.7 bits (159), Expect = 6e-13
Identities = 28/228 (12%), Positives = 62/228 (27%), Gaps = 19/228 (8%)
Query: 45 MEDKVVIITGASSD--IGEQIAYEYAKRKANLVLVARRE-------------NRLQGSTI 89
+ K +++TG +S I IA + A L + +
Sbjct: 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 62
Query: 90 DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
D + T+ + K D V++ + ++ I + Y
Sbjct: 63 DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 122
Query: 150 TFV---ALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGI 206
A + ++ + + +P ++ AKA+L + + E G+
Sbjct: 123 FVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE-GV 181
Query: 207 TIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ I + + + E +ED
Sbjct: 182 RVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA 229
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 63.2 bits (152), Expect = 5e-12
Identities = 31/247 (12%), Positives = 66/247 (26%), Gaps = 62/247 (25%)
Query: 48 KVVIITGASSDIGEQIA---YEYAKRKANLVLVARRENRLQ---------------GSTI 89
++ITG + +G + + +L R + + +
Sbjct: 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62
Query: 90 DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
++ +++ + + ++ L N A + + L N +
Sbjct: 63 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122
Query: 150 TFVALPYLHESNGRVVVN---------------ASVENWLPLPRMSLYASAKAALVTFYE 194
LP L ++ M Y ++K+AL +
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182
Query: 195 SLRFELNDEVGITIATH--GWIGIEMTK--------------------------GKFMLE 226
SL +L + I + GW+ +M G F+
Sbjct: 183 SLSVDLYPQ-RIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNY 241
Query: 227 DGAEMQW 233
DG + W
Sbjct: 242 DGTPLAW 248
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 63.1 bits (153), Expect = 5e-12
Identities = 25/220 (11%), Positives = 58/220 (26%), Gaps = 16/220 (7%)
Query: 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-----GSTIDEYNPINE---VTLV 101
I+T G A ++ + + T + P++E L+
Sbjct: 3 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELI 62
Query: 102 SLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN 161
VD LV+ F + + ++ + +
Sbjct: 63 EAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK 122
Query: 162 GRVVVNASVENWLPLPRMSLYAS-AKAALVTFYESLRFELNDEVGITIAT--HGWIGIEM 218
++ + + + A+A T +L EL + I + ++ E
Sbjct: 123 SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEY-NIPVFAIGPNYLHSED 181
Query: 219 TKGKFMLEDGAEMQWKEER--EVHVAG--GPVEDFARLIV 254
+ + E +V G ++ L+
Sbjct: 182 SPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVA 221
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 61.0 bits (147), Expect = 3e-11
Identities = 40/244 (16%), Positives = 63/244 (25%), Gaps = 44/244 (18%)
Query: 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVT--------- 99
+ITG + IG IA ++ +V+ R + E N +
Sbjct: 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62
Query: 100 -----------LVSLNNKESKAVDHLVNTASLGHTFFFEEVTDT----------SIFPRL 138
++ + + D LVN AS + DT + L
Sbjct: 63 LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122
Query: 139 LDINFWGNVYPTFVALPYLHESNGRVVVN------ASVENWLPLPRMSLYASAKAALVTF 192
N ++ E N LPLP +Y AK AL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182
Query: 193 YESLRFELNDEVGITIAT--HGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFA 250
+ EL I + G + + E+ + E A
Sbjct: 183 TRAAALELAPR-HIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSE-----ASAAQIA 236
Query: 251 RLIV 254
I
Sbjct: 237 DAIA 240
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 59.5 bits (143), Expect = 4e-11
Identities = 19/174 (10%), Positives = 52/174 (29%), Gaps = 14/174 (8%)
Query: 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL 103
+++ K ++ + +G + A A A +VL R+ ++ Q + +
Sbjct: 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE 79
Query: 104 NNKESKA------VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL 157
++ + ++G E+ + + I +
Sbjct: 80 TADDASRAEAVKGAHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIGG 134
Query: 158 HES--NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIA 209
++ G+ L + + +A + +ES + E +A
Sbjct: 135 IDATDKGKEYGGKRAFGALGIGGLK-LKLHRACIAKLFESSEGVFDAEEIYKLA 187
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 55.9 bits (133), Expect = 2e-09
Identities = 30/227 (13%), Positives = 71/227 (31%), Gaps = 18/227 (7%)
Query: 45 MEDKVVIITGASSD--IGEQIAYEYAKRKANLVLVARRENRLQ-------------GSTI 89
++ K +I G +++ I IA + A L E+ + +
Sbjct: 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYEL 62
Query: 90 DEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINF--WGNV 147
D + +L + K+ ++D +V++ + E + ++
Sbjct: 63 DVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSL 122
Query: 148 YPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGIT 207
L L + V+ + + + + ++ AKAAL + L +L I
Sbjct: 123 IELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKH-HIR 181
Query: 208 IATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254
+ I + + ++W E +E+ +
Sbjct: 182 VNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGM 228
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 50.0 bits (118), Expect = 1e-07
Identities = 45/288 (15%), Positives = 84/288 (29%), Gaps = 56/288 (19%)
Query: 47 DKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQG--STIDE------------ 91
V++TG + +G QIA A+R A +L+LV+R G + E
Sbjct: 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68
Query: 92 --YNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYP 149
V + + + + + A+ + +T R+ + +
Sbjct: 69 CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLT----GERIERASRAKVLGA 124
Query: 150 TFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDEVGITIA 209
+ V+ +S + P + YA A L + R + G+
Sbjct: 125 RNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSD-----GLPAT 179
Query: 210 THGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFPSW 269
W + M E ++ R V P E R + + R +
Sbjct: 180 AVAWGTWAGS---GMAEGPVADRF---RRHGVIEMPPETACRALQNALDRAEVCP----- 228
Query: 270 YDVFLLYRVFAPHVLNWTFRLLISSEGARRTSLIGTGRPLLEG-PPAR 316
+ + W R L++ R L + AR
Sbjct: 229 --------IVID--VRWD-RFLLAYTAQRP-------TRLFDEIDDAR 258
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 47.8 bits (112), Expect = 6e-07
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 45 MEDKVVIITGA--SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN 93
++ K ++++G S I IA ++ A LVL RL D
Sbjct: 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP 54
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 46.7 bits (109), Expect = 2e-06
Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 44 NMEDKVVIITGASSD--IGEQIAYEYAKRKANLVLVARRE 81
++ K I G + D G +A A A +++
Sbjct: 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP 44
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 44.3 bits (103), Expect = 9e-06
Identities = 13/70 (18%), Positives = 24/70 (34%)
Query: 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKES 108
V ++TGA+ +G IA + L R + N + +++ S
Sbjct: 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63
Query: 109 KAVDHLVNTA 118
V+ A
Sbjct: 64 NVATAPVSGA 73
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 41.4 bits (95), Expect = 1e-04
Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 3/109 (2%)
Query: 47 DKVVIITGASSD--IGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104
+ + I G G IA E +KR ++ + N + ++
Sbjct: 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP-VYNIFMKNYKNGKFDNDMIIDK 60
Query: 105 NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVA 153
+K+ +D L AS +E T + +L +V
Sbjct: 61 DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQ 109
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 38.9 bits (89), Expect = 4e-04
Identities = 9/38 (23%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85
+V ++ G + ++G+ +A A +V+ +RRE + +
Sbjct: 2 RVALLGG-TGNLGKGLALRLATLGHEIVVGSRREEKAE 38
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 349 | |||
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.97 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.96 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.78 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.74 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.74 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.68 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.61 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.59 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.58 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.57 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.56 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.56 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.54 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.54 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.54 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.53 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.51 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.51 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.51 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.5 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.5 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.45 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.39 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.37 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.37 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.36 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.36 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 99.05 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.04 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.02 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.02 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 98.92 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.86 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 98.79 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 98.32 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 98.08 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.98 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.93 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.92 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.86 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.82 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.8 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.75 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.74 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.69 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.68 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.64 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.63 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.63 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.58 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.57 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.56 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.54 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.52 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.51 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.51 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.5 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.43 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.43 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.4 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.4 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.35 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 97.34 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.34 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.33 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.3 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.29 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 97.28 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.26 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.25 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.23 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.2 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.2 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.19 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.15 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.06 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.05 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.04 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.01 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.98 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.91 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.86 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.85 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.83 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.76 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.71 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.7 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.67 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 96.63 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.55 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.43 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.4 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.38 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.36 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.32 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.26 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.25 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.04 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.88 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 95.84 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 95.79 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.73 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.65 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.46 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.4 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 95.38 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 95.37 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.36 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 95.24 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.1 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.94 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 94.7 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 94.68 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 94.62 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 94.29 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 94.19 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 94.01 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.7 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.7 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 93.68 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 93.64 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 93.49 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 93.48 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 93.41 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 93.35 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 93.35 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 93.33 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 93.28 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 93.16 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 93.14 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 92.95 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 92.93 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 92.93 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 92.92 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 92.74 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 92.7 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 92.68 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 92.63 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 92.59 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 92.57 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 92.55 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 92.52 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 92.46 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 92.41 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 92.38 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 92.27 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 92.26 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 92.25 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 92.18 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 92.12 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 92.03 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 91.99 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 91.87 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 91.86 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 91.85 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 91.8 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 91.67 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 91.67 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 91.61 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 91.51 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 91.5 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 91.49 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 91.39 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 91.21 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 91.2 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 91.2 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 91.2 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.18 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 91.07 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 90.71 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 90.21 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 89.93 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 89.92 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 89.9 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 89.77 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 89.76 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 89.72 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 89.71 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 89.5 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 89.49 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 89.44 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 89.26 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 89.24 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 89.21 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 89.06 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 89.05 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 88.89 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 88.85 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 88.83 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 88.73 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 88.53 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 88.2 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 88.15 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 88.06 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 87.88 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 87.17 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 87.06 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 87.01 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 86.96 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 86.41 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 86.35 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 86.04 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 85.97 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 85.93 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 85.88 | |
| d1iowa1 | 96 | D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge | 85.69 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 85.67 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 85.56 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 85.43 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 85.3 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 85.24 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 85.17 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 85.09 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 85.08 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 85.05 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 84.6 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 84.57 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 83.97 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 83.7 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 83.22 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 82.87 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 82.87 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 82.51 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 81.59 | |
| d2h00a1 | 250 | Methyltransferase 10 domain containing protein MET | 80.71 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 80.5 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 80.24 |
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3e-47 Score=339.86 Aligned_cols=218 Identities=22% Similarity=0.208 Sum_probs=191.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++..+.+| .+++|
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 86 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999999999999999887666788899999 46789
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||.....++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.++.++|++||+|
T Consensus 87 ~iDilvnnag~~~~~~~~~~-~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa 165 (251)
T d2c07a1 87 NVDILVNNAGITRDNLFLRM-KNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAG 165 (251)
T ss_dssp CCCEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred Cceeeeeccccccccccccc-cHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHH
Confidence 99999999999988888887 4699999999999999999999999997665 999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+++|+|+|+.|++++ ||||+|+||+++|+|.+.... ..........+.++..+|||+|++++||+++..+|+|.
T Consensus 166 l~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~----~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG 240 (251)
T d2c07a1 166 VIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE----QIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYING 240 (251)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH----HHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence 999999999999999 999999999999999876421 12222334467789999999999999999998887764
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.1e-47 Score=339.14 Aligned_cols=215 Identities=23% Similarity=0.237 Sum_probs=191.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
||+||+++||||++|||+++|++|+++|++|++++|++++++++.+++. .+...+.+| .+++|
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFG 77 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence 6899999999999999999999999999999999999999998887763 356777888 46789
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||.....++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.++.++|++||+|
T Consensus 78 ~iDilVnnAg~~~~~~~~~~-~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 156 (243)
T d1q7ba_ 78 EVDILVNNAGITRDNLLMRM-KDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG 156 (243)
T ss_dssp SCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred Ccceehhhhhhccccccccc-cccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence 99999999999999999887 5699999999999999999999999997655 999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+++|+++++.|++++ ||||+|+||+++|+|.+..... .........+.++..+|||+|+.+++++++..+|+|.
T Consensus 157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~----~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG 231 (243)
T d1q7ba_ 157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD----QRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITG 231 (243)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH----HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh----HHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence 999999999999999 9999999999999998764321 1222234457788999999999999999998887764
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=3.9e-47 Score=340.69 Aligned_cols=223 Identities=20% Similarity=0.225 Sum_probs=194.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.....+.+| .+++
T Consensus 4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d2ae2a_ 4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 83 (259)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence 37899999999999999999999999999999999999999999988886666788888998 3445
Q ss_pred C-CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 K-AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g-~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+ ++|+||||||+....++.+. +.++|++++++|+.|+++++|+++|+|+++ +|+||++||.++..+.|+.+.|++||
T Consensus 84 ~~~idilvnnAG~~~~~~~~~~-~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 162 (259)
T d2ae2a_ 84 HGKLNILVNNAGIVIYKEAKDY-TVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 162 (259)
T ss_dssp TTCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCceEEEECCceeccCccccC-CHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence 5 79999999999998888887 569999999999999999999999999765 49999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch-hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA-EMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+|+++|+|+|+.|++++ ||||+|+||+++|++.+......+.. .........+.++..+|||+|++++||+++..+|+
T Consensus 163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~i 242 (259)
T d2ae2a_ 163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV 242 (259)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence 99999999999999998 99999999999999976543322111 11122344578899999999999999999988887
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
|.
T Consensus 243 tG 244 (259)
T d2ae2a_ 243 TG 244 (259)
T ss_dssp CS
T ss_pred cC
Confidence 64
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.5e-47 Score=338.63 Aligned_cols=220 Identities=21% Similarity=0.298 Sum_probs=191.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEec--------------cccC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d--------------~~~~ 108 (349)
+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ ...+.++..+.+| .+++
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 81 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999999999999999999999998887776 3335578888898 4667
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEecccc-ccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVEN-WLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~-~~~~~~~~~Y~asK 186 (349)
|++|+||||||+...+++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||+++|..+ ..+.++..+|++||
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~-~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asK 160 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEF-PLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK 160 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhC-CHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHH
Confidence 999999999999988999887 5699999999999999999999999997665 89999999876 45788899999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++|+.|++++ ||||+|+||+++|+|.+...... ...+......+.++..+|||+|++++||+++..+|+|
T Consensus 161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~it 238 (251)
T d1vl8a_ 161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP--EKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVT 238 (251)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH--HHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCH--HHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCc
Confidence 99999999999999999 99999999999999987543221 1222334456788999999999999999999888876
Q ss_pred c
Q 039397 266 F 266 (349)
Q Consensus 266 ~ 266 (349)
.
T Consensus 239 G 239 (251)
T d1vl8a_ 239 G 239 (251)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.6e-47 Score=339.33 Aligned_cols=220 Identities=20% Similarity=0.199 Sum_probs=193.6
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+++|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++...+.++..+.+| .++
T Consensus 6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999998886666678889999 456
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+....++ +. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.++.++|++||
T Consensus 86 ~g~iDilvnnAG~~~~~~~-e~-~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK 163 (255)
T d1fmca_ 86 LGKVDILVNNAGGGGPKPF-DM-PMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK 163 (255)
T ss_dssp HSSCCEEEECCCCCCCCCT-TC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred cCCCCEeeeCCcCCCCCcc-cC-CHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHH
Confidence 7999999999999877665 54 4689999999999999999999999997665 7899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+|+++|+++||.|++++ ||||+|+||+++|++.+.....+ .........+.++..+|||+|++++|++++..+|+|
T Consensus 164 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e---~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~it 240 (255)
T d1fmca_ 164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE---IEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS 240 (255)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH---HHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence 99999999999999999 99999999999999886543221 222223456778999999999999999999888876
Q ss_pred c
Q 039397 266 F 266 (349)
Q Consensus 266 ~ 266 (349)
.
T Consensus 241 G 241 (255)
T d1fmca_ 241 G 241 (255)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=5.8e-47 Score=339.69 Aligned_cols=223 Identities=24% Similarity=0.290 Sum_probs=192.8
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc-hhhhHHHHhcCCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-RLQGSTIDEYNPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~-~l~~~~~~~~~~~~~~~~~~~d--------------~ 105 (349)
|-.||+||+++||||++|||+++|++|+++|++|++++|+.+ .++++.+++...+.++..+.+| .
T Consensus 1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (261)
T d1geea_ 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 345899999999999999999999999999999999999864 5677777776666788899999 4
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccCCCCchhhH
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
+++|++|+||||||+..+.++.+. +.++|++++++|+.|+++++|+++|+|++++ ++||++||.++..+.|+..+|+
T Consensus 81 ~~~G~iDiLVnnAG~~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~ 159 (261)
T d1geea_ 81 KEFGKLDVMINNAGLENPVSSHEM-SLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA 159 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred HHhCCCCEeeccceecCCcchhhc-CHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccc
Confidence 567999999999999999999887 5699999999999999999999999997654 4699999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++|+++|+.|++++ ||||+|+||+++|++........+ .........+.++..+|||+|++++||+++..+
T Consensus 160 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~--~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~ 237 (261)
T d1geea_ 160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPE--QRADVESMIPMGYIGEPEEIAAVAAWLASSEAS 237 (261)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHH--HHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred cCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHH--HHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence 99999999999999999999 999999999999998765322111 122223445778999999999999999999888
Q ss_pred eEEc
Q 039397 263 YVKF 266 (349)
Q Consensus 263 ~i~~ 266 (349)
|+|.
T Consensus 238 ~itG 241 (261)
T d1geea_ 238 YVTG 241 (261)
T ss_dssp TCCS
T ss_pred CCcC
Confidence 7754
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=6.9e-47 Score=336.74 Aligned_cols=219 Identities=18% Similarity=0.196 Sum_probs=178.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
++|+||+++||||++|||+++|+.|+++|++|++++|++++..+ ..+...+.++..+.+| .+++
T Consensus 1 qrL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~--~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 78 (247)
T d2ew8a1 1 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE--AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF 78 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH--HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHH--HHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999999999999999998754322 2333345678888999 4667
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.|+.++|++||+
T Consensus 79 G~iDilVnnAG~~~~~~~~~~-~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 157 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDEL-TFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA 157 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChHhC-CHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhc
Confidence 999999999999999999887 5699999999999999999999999998765 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
|+.+|+++|+.|++++ ||||+|+||+++|++.+........ ........+.++..+|||+|++++||+++..+|+|.
T Consensus 158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~--~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG 235 (247)
T d2ew8a1 158 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMF--DVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITG 235 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCS
T ss_pred cHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhH--HHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence 9999999999999999 9999999999999998764322211 111222345678999999999999999998888764
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1e-46 Score=338.41 Aligned_cols=221 Identities=21% Similarity=0.260 Sum_probs=184.1
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHh-cCCCCeEEEEEec--------------cccC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDE-YNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~-~~~~~~~~~~~~d--------------~~~~ 108 (349)
|+||++||||||+|||+++|++|+++|++|++++|++ +.++++.+++ ...+.++..+.+| .+++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999999999985 5566666655 3345578888998 4667
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+...+++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.|+.++|++||+
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDF-PTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCcEEEeecccccCCchhhh-hHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence 999999999999999999887 5699999999999999999999999998765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc--------hhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG--------AEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
|+++|+++|+.|++++ |+||+|+||+++|+|.+........ ..........+.++..+|||+|++++||++
T Consensus 161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S 240 (260)
T d1x1ta1 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999 9999999999999998765332111 011122345577899999999999999999
Q ss_pred cCCceEEc
Q 039397 259 RGDTYVKF 266 (349)
Q Consensus 259 ~~~~~i~~ 266 (349)
+..+|+|.
T Consensus 241 ~~a~~itG 248 (260)
T d1x1ta1 241 DAAAQITG 248 (260)
T ss_dssp GGGTTCCS
T ss_pred hhhCCCcC
Confidence 98888764
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=1e-46 Score=337.62 Aligned_cols=222 Identities=23% Similarity=0.226 Sum_probs=189.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh--cCCCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE--YNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~~~~d--------------~~~ 107 (349)
.|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++ ...+.++..+.+| .++
T Consensus 1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999998887766 3345578888998 466
Q ss_pred CCCcceeeecCcCCC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHH
Q 039397 108 SKAVDHLVNTASLGH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
+|++|+||||||+.. .+++++. +.++|++++++|+.|+++++|+++|+|+++ +|+||++||.++..+.|+..+|++|
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 159 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESF-TAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA 159 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred hCCCCEEEECCcccccCCchhhh-hhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence 799999999999865 4567776 569999999999999999999999999754 5999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch----hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA----EMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|+|+.+|+++|+.|++++ ||||+|+||+++|+|.+......... ..+......+.++..+|||+|++++||+++.
T Consensus 160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~ 239 (258)
T d1iy8a_ 160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD 239 (258)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999999999999999 99999999999999976543221110 1111123346788999999999999999998
Q ss_pred CceEEc
Q 039397 261 DTYVKF 266 (349)
Q Consensus 261 ~~~i~~ 266 (349)
.+|+|.
T Consensus 240 s~~itG 245 (258)
T d1iy8a_ 240 ASYVNA 245 (258)
T ss_dssp GTTCCS
T ss_pred hcCCcC
Confidence 888764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=1.4e-46 Score=336.86 Aligned_cols=220 Identities=20% Similarity=0.177 Sum_probs=191.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAV 111 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~i 111 (349)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++..+.+| .+++|++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 80 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 48999999999999999999999999999999999999999998886666788899999 5678999
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccc--ccC-CCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYL--HES-NGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m--~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
|+||||||+...+++.+. +.++|++++++|+.|+++++|+++|+| +++ .|+||+++|.++..+.|+.++|++||+|
T Consensus 81 DilVnnAG~~~~~~~~~~-~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaa 159 (257)
T d2rhca1 81 DVLVNNAGRPGGGATAEL-ADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG 159 (257)
T ss_dssp SEEEECCCCCCCSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CEEEecccccCCCChHHc-CHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHH
Confidence 999999999999998887 569999999999999999999999985 344 4899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc-------cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE-------DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+.+|+|+||.|++++ ||||+|+||+++|+|.+...... .+...+......+.++..+|||+|++++||+++.
T Consensus 160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~ 239 (257)
T d2rhca1 160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 239 (257)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999999999999 99999999999999976432111 1111122233457789999999999999999998
Q ss_pred CceEEc
Q 039397 261 DTYVKF 266 (349)
Q Consensus 261 ~~~i~~ 266 (349)
.+|+|.
T Consensus 240 s~~itG 245 (257)
T d2rhca1 240 AAAVTA 245 (257)
T ss_dssp GTTCCS
T ss_pred hcCCcC
Confidence 888764
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=6e-47 Score=339.32 Aligned_cols=219 Identities=19% Similarity=0.165 Sum_probs=165.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC-
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES- 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~- 108 (349)
+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.....++..+.+| .+++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 84 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 7899999999999999999999999999999999999999999988886556678889998 3344
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.++..+|++||+
T Consensus 85 g~idilvnnAG~~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 163 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDY-TAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG 163 (259)
T ss_dssp TCCSEEEEECCC------CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred CCcccccccccccCCCchhhC-CHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccccc
Confidence 789999999999999998887 5699999999999999999999999997655 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
|+.+|+++|+.|++++ ||||+|+||+++|+|.+.....+ .........+.++..+|||+|++++||+++..+|+|.
T Consensus 164 al~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~---~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG 240 (259)
T d1xq1a_ 164 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---FKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITG 240 (259)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGTTCCS
T ss_pred chhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH---HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 9999999999999999 99999999999999987643221 1222234567789999999999999999998887764
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.3e-46 Score=331.23 Aligned_cols=211 Identities=17% Similarity=0.165 Sum_probs=189.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
-.|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++. .....+.+| .+++
T Consensus 2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (244)
T d1nffa_ 2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF 78 (244)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999988887763 457788888 4567
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+...+++++. +.++|++++++|+.|+++++|+++|+|+++ +|+||++||.++..+.++.++|++||+
T Consensus 79 g~idilinnAG~~~~~~~~~~-~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa 157 (244)
T d1nffa_ 79 GGLHVLVNNAGILNIGTIEDY-ALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF 157 (244)
T ss_dssp SCCCEEEECCCCCCCBCTTTS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCeEEEECCcccCCCchhhC-CHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHH
Confidence 999999999999999999887 569999999999999999999999999765 499999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
|+++|+|+++.|++++ ||||+|+||+++|+|.+...... .+.+.++..+|||+|++++|++++..+|+|.
T Consensus 158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---------~~~pl~R~~~p~diA~~v~fL~s~~s~~itG 228 (244)
T d1nffa_ 158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDI---------FQTALGRAAEPVEVSNLVVYLASDESSYSTG 228 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTC---------SCCSSSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHH---------HhccccCCCCHHHHHHHHHHHhChhhCCCcC
Confidence 9999999999999999 99999999999999986542211 2346678999999999999999998887764
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=335.49 Aligned_cols=217 Identities=20% Similarity=0.214 Sum_probs=186.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++ .+...+.+| .+++|
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~g 78 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFG 78 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence 689999999999999999999999999999999999999988877765 346778888 46679
Q ss_pred CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+... .++++. +.++|++++++|+.|+++++|+++|+|++++|+||++||.++..+.++..+|++||+|
T Consensus 79 ~iDilVnnAG~~~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 157 (250)
T d1ydea1 79 RLDCVVNNAGHHPPPQRPEET-SAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGA 157 (250)
T ss_dssp CCCEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCEEEecccccccccccccc-cHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhh
Confidence 99999999998654 456665 5699999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh--hhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE--MQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+.+|+++|+.|++++ ||||+|+||+++|+|.+......++.. ........++++..+|||+|++++||+++ ++|+|
T Consensus 158 l~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~it 236 (250)
T d1ydea1 158 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT 236 (250)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCC
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCCc
Confidence 999999999999999 999999999999998765433222211 12223345778999999999999999986 66765
Q ss_pred c
Q 039397 266 F 266 (349)
Q Consensus 266 ~ 266 (349)
.
T Consensus 237 G 237 (250)
T d1ydea1 237 G 237 (250)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=9.9e-46 Score=328.13 Aligned_cols=214 Identities=20% Similarity=0.180 Sum_probs=185.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
|+|+||+++||||++|||+++|++|+++|++|++++|+++++++..+++ ....+.+| .+++
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 4689999999999999999999999999999999999999988877654 34567888 4667
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
|++|+||||||+...+++++. +.++|++++++|+.|+++++|+++|+|+++++.+|+++|+.+..+.++..+|++||+|
T Consensus 76 g~iDilVnnAG~~~~~~~~~~-~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~asKaa 154 (242)
T d1ulsa_ 76 GRLDGVVHYAGITRDNFHWKM-PLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAG 154 (242)
T ss_dssp SSCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHH
T ss_pred CCceEEEECCcccccCchhhC-cchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHHHHH
Confidence 999999999999998988887 5699999999999999999999999998877655555555678899999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+++|+++|+.|++++ ||||+|+||+++|++..... +...+......+.++..+|||+|++++|++++..+|+|.
T Consensus 155 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~----~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG 229 (242)
T d1ulsa_ 155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP----EKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITG 229 (242)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC----HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC----HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCC
Confidence 999999999999999 99999999999999987542 112222344567889999999999999999998887764
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=4e-46 Score=332.54 Aligned_cols=218 Identities=21% Similarity=0.298 Sum_probs=191.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++... .++..+.+| .+++|
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC-CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 589999999999999999999999999999999999999999888887543 468888999 46679
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccCCCCchhhHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++|+||||||+...+++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.|+.++|++||+
T Consensus 82 ~iDiLVnnAg~~~~~~~~~~-~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa 160 (251)
T d1zk4a1 82 PVSTLVNNAGIAVNKSVEET-TTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG 160 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CceEEEeccccccccchhcc-cccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence 99999999999999999987 5699999999999999999999999998765 58999999999999999999999999
Q ss_pred HHHHHHHHHHHH--hcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 188 ALVTFYESLRFE--LNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 188 al~~l~~~la~e--l~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+.+|++++|.| ++++ ||||+|+||+++|+|.+.....+ .........+.++..+|||+|++++||+++..+|+
T Consensus 161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~i 237 (251)
T d1zk4a1 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE---EAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA 237 (251)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH---HHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH---HHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence 999999999999 5677 99999999999999987643221 11112334577889999999999999999988887
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
|.
T Consensus 238 tG 239 (251)
T d1zk4a1 238 TG 239 (251)
T ss_dssp CS
T ss_pred cC
Confidence 64
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-46 Score=328.87 Aligned_cols=223 Identities=23% Similarity=0.274 Sum_probs=199.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+++++||+++|||||+|||+++|++|+++|++|++++|++++++++.+++...+.++..+.|| .++
T Consensus 2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999886666788999999 467
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+.....+.+. +.++|++++++|+.|+++++++++|+|++++ |+||++||.++..+.|++++|++||
T Consensus 82 ~g~idilinnag~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK 160 (244)
T d1yb1a_ 82 IGDVSILVNNAGVVYTSDLFAT-QDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 160 (244)
T ss_dssp TCCCSEEEECCCCCCCCCCGGG-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred cCCCceeEeecccccccccccc-chhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence 8999999999999999888886 5689999999999999999999999997665 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC---C-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 187 AALVTFYESLRFELND---E-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 187 aal~~l~~~la~el~~---~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+|+.+|+++|+.|+++ + |+||+|+||+|+|+|.+.. .....+..+||++|+.++..+..++.
T Consensus 161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~--------------~~~~~~~~~pe~va~~i~~~~~~~~~ 226 (244)
T d1yb1a_ 161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--------------STSLGPTLEPEEVVNRLMHGILTEQK 226 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--------------HHHHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc--------------CccccCCCCHHHHHHHHHHHHhcCCc
Confidence 9999999999999865 4 9999999999999987642 11234678999999999999999999
Q ss_pred eEEcCchHHHHHHHHHh
Q 039397 263 YVKFPSWYDVFLLYRVF 279 (349)
Q Consensus 263 ~i~~p~~~~~~~~~~~~ 279 (349)
.+++|....++..+.++
T Consensus 227 ~i~~p~~~~~l~~~~ri 243 (244)
T d1yb1a_ 227 MIFIPSSIAFLTTLERI 243 (244)
T ss_dssp EEEECCCCCHHHHHHTT
T ss_pred EEEehHHHHHHHHHHHh
Confidence 99999877766655544
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=2e-45 Score=325.78 Aligned_cols=205 Identities=21% Similarity=0.215 Sum_probs=186.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCe-------EEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKAN-------LVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~-------Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
++|||||||+|||+++|++|+++|++ |++++|++++++++..++...+..+..+.+| .+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999998 9999999999999999887777788899999 56
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~as 185 (349)
++|++|+||||||+...+++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.|+.++|++|
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 160 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDL-TEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS 160 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCcceeecccccccCCccccC-CHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence 78999999999999999999987 5699999999999999999999999997654 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+|+.+|+++|+.|++++ |+||+|+||+++|+|.+...... ..+..+|||+|++++++++++++++
T Consensus 161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~-------------~~~~~~PedvA~~v~~l~s~~~~~~ 227 (240)
T d2bd0a1 161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-------------QALMMMPEDIAAPVVQAYLQPSRTV 227 (240)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-------------GGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh-------------HhcCCCHHHHHHHHHHHHcCCccCc
Confidence 999999999999999999 99999999999999987642211 1256789999999999999988877
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
+.
T Consensus 228 ~~ 229 (240)
T d2bd0a1 228 VE 229 (240)
T ss_dssp EE
T ss_pred cC
Confidence 53
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=3.7e-46 Score=334.53 Aligned_cols=222 Identities=17% Similarity=0.213 Sum_probs=192.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++..+.+| .+++|
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999999999999999998887777788999999 46679
Q ss_pred CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 110 AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 110 ~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
++|+||||||+... +++.+. +.++|++++++|+.++++++|+++|+|+++ +|+||++||.++..+.|+.++|++||+
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~-~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDY-PSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG 160 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred CCCeehhhhccccccCccccc-cHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence 99999999998754 677776 569999999999999999999999998654 599999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccc------------cccchhhhhHHHHhhhcCCCCHHHHHHHHH
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFM------------LEDGAEMQWKEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~edvA~~i~ 254 (349)
|+++|+++|+.|++++ ||||+|+||+++|++...... ..++...+......+.++..+|||+|++++
T Consensus 161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~ 240 (260)
T d1zema1 161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 240 (260)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 9999999999999999 999999999999998543111 001111111233456789999999999999
Q ss_pred HHHhcCCceEEc
Q 039397 255 SGACRGDTYVKF 266 (349)
Q Consensus 255 ~l~~~~~~~i~~ 266 (349)
||+++..+|+|.
T Consensus 241 fL~S~~s~~itG 252 (260)
T d1zema1 241 FLLGDDSSFMTG 252 (260)
T ss_dssp HHHSGGGTTCCS
T ss_pred HHhCchhcCccC
Confidence 999998888764
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-46 Score=329.82 Aligned_cols=219 Identities=19% Similarity=0.159 Sum_probs=191.2
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCC
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKA 110 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~ 110 (349)
|.+.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+..+.+| .+++|+
T Consensus 1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~g~ 76 (244)
T d1pr9a_ 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALGSVGP 76 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCC
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHHhCC
Confidence 5678999999999999999999999999999999999999999988877753 35566777 567899
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccc-c-CCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLH-E-SNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~-~-~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
+|+||||||+...+++.+. +.++|++++++|+.++++++|+++|+|. + ++|+||++||.++..+.|+..+|++||+|
T Consensus 77 iDilVnnAg~~~~~~~~~~-~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaa 155 (244)
T d1pr9a_ 77 VDLLVNNAAVALLQPFLEV-TKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGA 155 (244)
T ss_dssp CCEEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred ceEEEeccccccccchhhh-hHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHH
Confidence 9999999999999999887 5699999999999999999999999763 3 35999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+++|+++|+.|++++ ||||+|+||+++|++.+......+ .........+.++..+|||+|+.++||+++..+|+|.
T Consensus 156 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~--~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG 232 (244)
T d1pr9a_ 156 LDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH--KAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTG 232 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHH--HHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChH--HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCC
Confidence 999999999999998 999999999999999765433221 2222234457789999999999999999998888764
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=1.9e-46 Score=334.98 Aligned_cols=220 Identities=19% Similarity=0.185 Sum_probs=189.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++. .+...+.+| .+++
T Consensus 2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 78 (253)
T d1hxha_ 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG---ERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---TTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999999999999998888773 456777888 4677
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
|++|+||||||+....++.+. +.++|++++++|+.|+++++|+++|+|++++|+||++||.++..+.++.++|++||+|
T Consensus 79 g~iDilVnnAG~~~~~~~~~~-~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 157 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETG-RLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCeEEecccccCCCCcccC-CHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHH
Confidence 999999999999988888887 5699999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC--C-eeEEEEecCcccCCCCCCccccccchhh-hhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 189 LVTFYESLRFELND--E-VGITIATHGWIGIEMTKGKFMLEDGAEM-QWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 189 l~~l~~~la~el~~--~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
+.+|+++++.|+++ + ||||+|+||+++|++.+.........+. .......+.++..+|||+|++++||+++..+|+
T Consensus 158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~i 237 (253)
T d1hxha_ 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM 237 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCC
Confidence 99999999999976 4 9999999999999987654332221111 111223345678899999999999999988887
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
|.
T Consensus 238 tG 239 (253)
T d1hxha_ 238 SG 239 (253)
T ss_dssp CS
T ss_pred cC
Confidence 64
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.3e-46 Score=329.42 Aligned_cols=217 Identities=20% Similarity=0.173 Sum_probs=189.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVD 112 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iD 112 (349)
|||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+..+.+| .+++|++|
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~g~iD 76 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALGGIGPVD 76 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence 57999999999999999999999999999999999999999888877753 35567788 56789999
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
+||||||+...+++.+. +.++|++++++|+.|+++++|+++|+|.+ .+|+||+++|.++..+.|+..+|++||+|+.
T Consensus 77 ilVnnAg~~~~~~~~~~-~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~ 155 (242)
T d1cyda_ 77 LLVNNAALVIMQPFLEV-TKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMT 155 (242)
T ss_dssp EEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred EEEECCccccchhHHHH-HHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHH
Confidence 99999999999999887 56999999999999999999999998643 3489999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+|+|+|+.|++++ ||||+|+||+++|++.+...... ..........+.++..+|||+|++++||+++..+|+|.
T Consensus 156 ~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG 230 (242)
T d1cyda_ 156 MLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP--EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSG 230 (242)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCH--HHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCH--HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCC
Confidence 9999999999999 99999999999999876543221 12223344567889999999999999999998888764
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=4.8e-46 Score=333.08 Aligned_cols=220 Identities=18% Similarity=0.216 Sum_probs=190.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
|+|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++ +.++..+.+| .+++
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999999999999888877 3467788898 4567
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc-C-CCeEEEEeccccccCCCCchhhHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-S-NGRVVVNASVENWLPLPRMSLYASAK 186 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~-~g~IV~isS~~~~~~~~~~~~Y~asK 186 (349)
|++|+||||||+...+++.+. +.++|++++++|+.|+++++|+++|+|.+ + +|+||++||.++..+.++.++|++||
T Consensus 78 g~iDilVnnAg~~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 156 (256)
T d1k2wa_ 78 GSIDILVNNAALFDLAPIVEI-TRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK 156 (256)
T ss_dssp SCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCccEEEeecccccccccccC-CHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence 999999999999988888887 56999999999999999999999998644 3 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc-------cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE-------DGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+|+++|+++|+.|++++ ||||+|+||+++|++.+...... ............+.++..+|||+|++++||++
T Consensus 157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S 236 (256)
T d1k2wa_ 157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT 236 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999 99999999999999976432211 01111122334577899999999999999999
Q ss_pred cCCceEEc
Q 039397 259 RGDTYVKF 266 (349)
Q Consensus 259 ~~~~~i~~ 266 (349)
+..+|+|.
T Consensus 237 ~~a~~iTG 244 (256)
T d1k2wa_ 237 PEADYIVA 244 (256)
T ss_dssp GGGTTCCS
T ss_pred chhCCccC
Confidence 98888764
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.1e-46 Score=331.66 Aligned_cols=216 Identities=20% Similarity=0.212 Sum_probs=183.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
.|+||+||||||++|||+++|++|+++|++|++++|+++..+ ..+++ ....+++| .+++|
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G 75 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG 75 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999999987644 33333 23456788 46679
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+..++++++. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.++..+|++||+|
T Consensus 76 ~iDiLVnnAG~~~~~~~~~~-~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 154 (248)
T d2d1ya1 76 RVDVLVNNAAIAAPGSALTV-RLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG 154 (248)
T ss_dssp CCCEEEECCCCCCCBCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred CCCeEEEeCcCCCCCChhhC-CHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence 99999999999999999987 5699999999999999999999999997765 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc--hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG--AEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+++|+++|+.|++++ ||||+|+||+++|++.......... ..........+.++..+|||+|+.++||+++..+|+|
T Consensus 155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~it 234 (248)
T d2d1ya1 155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT 234 (248)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence 999999999999999 9999999999999987543222111 1122223445778899999999999999999888876
Q ss_pred c
Q 039397 266 F 266 (349)
Q Consensus 266 ~ 266 (349)
.
T Consensus 235 G 235 (248)
T d2d1ya1 235 G 235 (248)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=2.8e-46 Score=333.58 Aligned_cols=215 Identities=20% Similarity=0.240 Sum_probs=187.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++ +..+..+.+| .+++|
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence 789999999999999999999999999999999999999888777665 3567888898 46679
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAA 188 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaa 188 (349)
++|+||||||+....++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.++.++|++||+|
T Consensus 79 ~iDilVnnAg~~~~~~~~~~-~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 157 (254)
T d1hdca_ 79 SVDGLVNNAGISTGMFLETE-SVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CccEEEecCccccccccccc-cccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence 99999999999988888887 5699999999999999999999999997655 999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCC-CHHHHHHHHHHHHhcCCceEEc
Q 039397 189 LVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGG-PVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 189 l~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+++|+++|+.|++++ ||||+|+||+++|+|.......... ......++++.. .|||+|++++||+++..+|+|.
T Consensus 158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~----~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG 233 (254)
T d1hdca_ 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGE----GNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTG 233 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCST----TSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHH----HHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCC
Confidence 999999999999999 9999999999999987643222111 112234566665 6999999999999998877754
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=1e-45 Score=330.85 Aligned_cols=219 Identities=17% Similarity=0.184 Sum_probs=190.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
.|++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++..+.+| .+++|++|
T Consensus 1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 3789999999999999999999999999999999999999998886666788889999 46789999
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
+||||||+...+++.+. +.++|++++++|+.|+++++|+++|+|.++ +|+||++||.++..+.|+.+.|++||+|++
T Consensus 81 ilVnnAG~~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~ 159 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESI-TPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 159 (255)
T ss_dssp EEEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred EEEecccccccCcHHHh-hhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHH
Confidence 99999999998999887 569999999999999999999999987554 378999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc-------hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 191 TFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG-------AEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 191 ~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+|+++|+.|++++ ||||+|+||+++|+|.......... ..........+.++..+|||+|++++||+++..+
T Consensus 160 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~ 239 (255)
T d1gega_ 160 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 239 (255)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred hhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence 9999999999999 9999999999999987643221111 0111112345678899999999999999999888
Q ss_pred eEEc
Q 039397 263 YVKF 266 (349)
Q Consensus 263 ~i~~ 266 (349)
|+|.
T Consensus 240 ~itG 243 (255)
T d1gega_ 240 YMTG 243 (255)
T ss_dssp TCCS
T ss_pred CccC
Confidence 8764
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=8.1e-45 Score=327.37 Aligned_cols=222 Identities=20% Similarity=0.239 Sum_probs=188.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+|+||+|||||||+|||+++|++|+++|++|++++|++++++++.+++...+ .+..+.+| .+++
T Consensus 2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (268)
T d2bgka1 2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH 80 (268)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999999999999999999999999988886544 46778888 4667
Q ss_pred CCcceeeecCcCCCCcc--ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCc-hhhHH
Q 039397 109 KAVDHLVNTASLGHTFF--FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRM-SLYAS 184 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~-~~Y~a 184 (349)
|++|+||||||+....+ +.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||+++..+.++. ..|++
T Consensus 81 g~iD~lVnnAG~~~~~~~~~~~~-~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~a 159 (268)
T d2bgka1 81 GKLDIMFGNVGVLSTTPYSILEA-GNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA 159 (268)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHH
T ss_pred CCcceeccccccccCCCcccccC-cHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccch
Confidence 99999999999876543 4554 5689999999999999999999999997655 899999999999877654 58999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhH-HHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWK-EEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
||+|+++|+++|+.|++++ ||||+|+||+++|+|................ ....+.++..+|||+|++++||+++..+
T Consensus 160 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~ 239 (268)
T d2bgka1 160 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESK 239 (268)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGT
T ss_pred hHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhC
Confidence 9999999999999999999 9999999999999998876544333222221 2223556899999999999999999888
Q ss_pred eEEc
Q 039397 263 YVKF 266 (349)
Q Consensus 263 ~i~~ 266 (349)
|||.
T Consensus 240 ~itG 243 (268)
T d2bgka1 240 YVSG 243 (268)
T ss_dssp TCCS
T ss_pred CccC
Confidence 7754
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.5e-45 Score=325.77 Aligned_cols=208 Identities=20% Similarity=0.260 Sum_probs=172.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
..|+||++|||||++|||+++|++|+++|++|++++|+++.+++ +..+.+| .+++
T Consensus 3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~-----------~~~~~~Dv~~~~~v~~~~~~~~~~~ 71 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEEHQ 71 (237)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcC-----------ceEEEEecCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999999999876553 3345566 5667
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||+....++.+. +.|+|++++++|+.++++++|+++|+|++++ |+||++||.++..+.++.++|++||+
T Consensus 72 g~iDiLVnnAG~~~~~~~~~~-~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 150 (237)
T d1uzma1 72 GPVEVLVSNAGLSADAFLMRM-TEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA 150 (237)
T ss_dssp SSCSEEEEECSCCC-----CC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred CCceEEEeeecccccccHhhC-CHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHH
Confidence 999999999999998888887 4699999999999999999999999997665 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
|+++|+++|+.|++++ ||||+|+||+++|+|.+... +..........+.++..+|||+|++++|++++..+|+|.
T Consensus 151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~----~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG 226 (237)
T d1uzma1 151 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD----ERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISG 226 (237)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC----HHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 9999999999999999 99999999999999876431 112222334567789999999999999999998888764
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=1.6e-45 Score=327.17 Aligned_cols=214 Identities=21% Similarity=0.202 Sum_probs=185.9
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEe-cCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVA-RRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~-r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
++||||||++|||+++|++|+++|++|++++ |+++.++++.+++...+.++..+.+| .+++|++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999999975 56667777777775556688889999 56789999
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHHHHHH
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKAALVT 191 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~ 191 (349)
+||||||.....++.+. +.++|++++++|+.|+++++|+++|+|+++ +|+||++||.++..+.++.++|++||+|+.+
T Consensus 82 iLVnnAg~~~~~~~~~~-~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ 160 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRM-KKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 160 (244)
T ss_dssp EEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred ccccccccccccchhcc-chHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence 99999999999999887 569999999999999999999999999765 4999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHH-hcCCceEEc
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGA-CRGDTYVKF 266 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~-~~~~~~i~~ 266 (349)
|+++|+.|++++ ||||+|+||+++|+|.+.... ...+......+.++..+|||+|++++||+ ++..+|+|.
T Consensus 161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~----~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG 233 (244)
T d1edoa_ 161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGE----DMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITG 233 (244)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH----HHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCS
T ss_pred ChHHHHHHHhhhCcEEEEEecceeccHHHHHhhH----HHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcC
Confidence 999999999999 999999999999998765421 11222234457789999999999999996 777777764
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.2e-44 Score=325.56 Aligned_cols=222 Identities=23% Similarity=0.258 Sum_probs=177.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC---CCCeEEEEEec--------------cc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN---PINEVTLVSLN--------------NK 106 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~---~~~~~~~~~~d--------------~~ 106 (349)
.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.. ...++..+.+| .+
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999998888732 23468889998 46
Q ss_pred cCCCcceeeecCcCCCCcc----ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc-cccCCCCchh
Q 039397 107 ESKAVDHLVNTASLGHTFF----FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE-NWLPLPRMSL 181 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~----~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~-~~~~~~~~~~ 181 (349)
++|++|+||||||+..+.. +.+. +.|+|++++++|+.|+++++|+++|+|++++|++|+++|+. +..+.|+.++
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~~~-~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~ 160 (264)
T d1spxa_ 82 KFGKLDILVNNAGAAIPDSQSKTGTAQ-SIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPY 160 (264)
T ss_dssp HHSCCCEEEECCC-------------C-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHH
T ss_pred HhCCCCEeecccccccCCccccccccC-CHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchh
Confidence 6799999999999865433 3333 45899999999999999999999999988888888888776 5779999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh-----hhhHHHHhhhcCCCCHHHHHHHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE-----MQWKEEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~edvA~~i~~ 255 (349)
|++||+|+++|+++|+.|++++ ||||+|+||+++|+|.......++... ........+.++..+|||+|++++|
T Consensus 161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~f 240 (264)
T d1spxa_ 161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 240 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999876433222111 1112344578899999999999999
Q ss_pred HHhcC-CceEEc
Q 039397 256 GACRG-DTYVKF 266 (349)
Q Consensus 256 l~~~~-~~~i~~ 266 (349)
|++++ .+|+|.
T Consensus 241 L~S~~~s~~itG 252 (264)
T d1spxa_ 241 LADRKTSSYIIG 252 (264)
T ss_dssp HHCHHHHTTCCS
T ss_pred HhCCcccCCccC
Confidence 99854 666653
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=2.7e-44 Score=321.78 Aligned_cols=222 Identities=20% Similarity=0.207 Sum_probs=187.8
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC-
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES- 108 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~- 108 (349)
+|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++......+..+.+| .+++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 82 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 7899999999999999999999999999999999999999999888886666778888899 3444
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|.+|+||||||.....++.+. +.++|++++++|+.++++++++++|.|.++ .|+||++||.++..+.|+..+|+++|+
T Consensus 83 g~idilinnag~~~~~~~~~~-~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~ 161 (258)
T d1ae1a_ 83 GKLNILVNNAGVVIHKEAKDF-TEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKG 161 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCcEEEeccccccccCccccC-CHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHH
Confidence 689999999999999988887 569999999999999999999999999755 499999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch--hhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA--EMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+++|++.++.|++++ ||||+|+||+++|+|.+......... .........+.++..+|||+|++++|++++..+|+
T Consensus 162 al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~i 241 (258)
T d1ae1a_ 162 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYI 241 (258)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCC
Confidence 9999999999999999 99999999999999987654433221 22222445577899999999999999999988877
Q ss_pred Ec
Q 039397 265 KF 266 (349)
Q Consensus 265 ~~ 266 (349)
+.
T Consensus 242 tG 243 (258)
T d1ae1a_ 242 TG 243 (258)
T ss_dssp CS
T ss_pred cC
Confidence 54
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=1.7e-44 Score=326.37 Aligned_cols=220 Identities=20% Similarity=0.199 Sum_probs=182.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
|+|+||+|||||||+|||+++|++|+++|++|++++|++++++++..+. +.++..+.+| .+++
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999999999999988877765 3467788888 4678
Q ss_pred CCcceeeecCcCCCCccccccC----CcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVT----DTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~----~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
|++|++|||||+.......... +.++|++++++|+.|+++++|+++|+|++++|+||+++|.++..+.++.++|++
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~a 157 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTA 157 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHHH
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHHH
Confidence 9999999999987654432211 124699999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccc------hhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 185 AKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDG------AEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
||+|+.+|+|+||.|++++||||+|+||+|+|+|.......... ...+......+.++..+|||+|++++|+++
T Consensus 158 sKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S 237 (276)
T d1bdba_ 158 AKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFAT 237 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 99999999999999998779999999999999987643221111 011222334577899999999999999998
Q ss_pred c-CCceEE
Q 039397 259 R-GDTYVK 265 (349)
Q Consensus 259 ~-~~~~i~ 265 (349)
+ .+.|+|
T Consensus 238 ~~~a~~it 245 (276)
T d1bdba_ 238 RGDAAPAT 245 (276)
T ss_dssp HHHHTTCS
T ss_pred CcccCCee
Confidence 4 455654
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-44 Score=324.38 Aligned_cols=224 Identities=16% Similarity=0.160 Sum_probs=191.7
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-----CCCCeEEEEEec-----------
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-----NPINEVTLVSLN----------- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-----~~~~~~~~~~~d----------- 104 (349)
-+..|+||+||||||++|||+++|++|+++|++|++++|+++++++..+++. ..+.++..+.+|
T Consensus 6 ~~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~ 85 (297)
T d1yxma1 6 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV 85 (297)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence 3457999999999999999999999999999999999999999988877762 235578889998
Q ss_pred ---cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCch
Q 039397 105 ---NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 ---~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~ 180 (349)
.+.+|++|+||||||+....++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++|| ++..+.|+..
T Consensus 86 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~-~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~ 163 (297)
T d1yxma1 86 KSTLDTFGKINFLVNNGGGQFLSPAEHI-SSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAV 163 (297)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCH
T ss_pred HHHHHHhCCeEEEEeeccccccCchhhh-hhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccc
Confidence 4567999999999999988888887 5699999999999999999999999997654 67777754 5667889999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
.|++||+|+++|+++||.|++++ ||||+|+||+++|++.............+......+.++..+|||+|++++||+++
T Consensus 164 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd 243 (297)
T d1yxma1 164 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSP 243 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSG
T ss_pred cchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999999999999999 99999999999999986654433332222334455778999999999999999999
Q ss_pred CCceEEc
Q 039397 260 GDTYVKF 266 (349)
Q Consensus 260 ~~~~i~~ 266 (349)
..+|||.
T Consensus 244 ~s~~iTG 250 (297)
T d1yxma1 244 AASFITG 250 (297)
T ss_dssp GGTTCCS
T ss_pred hhcCcCC
Confidence 8888764
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=3.5e-44 Score=323.80 Aligned_cols=222 Identities=26% Similarity=0.286 Sum_probs=184.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC---CCeEEEEEec--------------cc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP---INEVTLVSLN--------------NK 106 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~---~~~~~~~~~d--------------~~ 106 (349)
.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++... ..++..+.+| .+
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999988888432 3468889998 46
Q ss_pred cCCCcceeeecCcCCCCcccccc---CCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec-cccccCCCCchhh
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEV---TDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS-VENWLPLPRMSLY 182 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~---~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS-~~~~~~~~~~~~Y 182 (349)
++|++|+||||||+..+..+.+. .+.++|++++++|+.|+++++|+++|+|++++|++|+++| .++..+.++..+|
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y 161 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY 161 (272)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence 67999999999999877655432 2346799999999999999999999999888788887766 5678899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhh-----hhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEM-----QWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
++||+|+.+|+++||.|++++ ||||+|+||+|+|+|............. .......++++..+|||+|++++||
T Consensus 162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL 241 (272)
T d1xkqa_ 162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999997654332211111 0112234678899999999999999
Q ss_pred HhcC-CceEE
Q 039397 257 ACRG-DTYVK 265 (349)
Q Consensus 257 ~~~~-~~~i~ 265 (349)
++++ +.|+|
T Consensus 242 ~S~~as~~iT 251 (272)
T d1xkqa_ 242 ADRNLSFYIL 251 (272)
T ss_dssp HCHHHHTTCC
T ss_pred hCcchhCCcc
Confidence 9865 34554
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=2.6e-44 Score=322.66 Aligned_cols=221 Identities=15% Similarity=0.152 Sum_probs=188.7
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEec--------------c
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN--------------N 105 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d--------------~ 105 (349)
|+++++||+||||||++|||+++|++|+++|++|++++|+++++++..+++ ...+.++..+.+| .
T Consensus 3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (260)
T d1h5qa_ 3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 82 (260)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999988877766 3335578888998 4
Q ss_pred ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEecccccc-------CC
Q 039397 106 KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNASVENWL-------PL 176 (349)
Q Consensus 106 ~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~isS~~~~~-------~~ 176 (349)
+++|++|+||||||+....++.+. +.++|++++++|+.|+++++|+++|+|.+ .+|+|++++|..... +.
T Consensus 83 ~~~g~iDilVnnAg~~~~~~~~~~-~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~ 161 (260)
T d1h5qa_ 83 ADLGPISGLIANAGVSVVKPATEL-THEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS 161 (260)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred HHhCCCcEecccccccccCCHHHh-ccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC
Confidence 678999999999999998999887 56999999999999999999999999853 347788877776553 34
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHH
Q 039397 177 PRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 177 ~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~ 255 (349)
++..+|++||+|+.+|+|+|+.|++++ ||||+|+||+++|++..... ....+......+.++..+|||+|++++|
T Consensus 162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~----~~~~~~~~~~~pl~R~g~pedvA~~v~f 237 (260)
T d1h5qa_ 162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD----KKIRDHQASNIPLNRFAQPEEMTGQAIL 237 (260)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC----HHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC----HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 678999999999999999999999999 99999999999999986542 1122223445677899999999999999
Q ss_pred HHhcCCceEEc
Q 039397 256 GACRGDTYVKF 266 (349)
Q Consensus 256 l~~~~~~~i~~ 266 (349)
|+++..+|+|.
T Consensus 238 L~S~~s~~itG 248 (260)
T d1h5qa_ 238 LLSDHATYMTG 248 (260)
T ss_dssp HHSGGGTTCCS
T ss_pred HhcchhCCCcC
Confidence 99998888764
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.7e-44 Score=315.44 Aligned_cols=209 Identities=25% Similarity=0.295 Sum_probs=181.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------cccCCCcceeee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------NKESKAVDHLVN 116 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------~~~~g~iDvlVn 116 (349)
|+||++|||||++|||+++|++|+++|++|++++|+++.+++.. ...+.+| .+++|++|+|||
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~---------~~~~~~Dv~~~~~~~~~~~g~iD~lVn 72 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSG---------HRYVVCDLRKDLDLLFEKVKEVDILVL 72 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTC---------SEEEECCTTTCHHHHHHHSCCCSEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcC---------CcEEEcchHHHHHHHHHHhCCCcEEEe
Confidence 68999999999999999999999999999999999987665432 2234555 467899999999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHHHHHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYES 195 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~ 195 (349)
|||+....++.+. +.++|++++++|+.++++++|+++|+|++++ |+||+++|..+..+.++...|++||+|+++|+++
T Consensus 73 nAG~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~ 151 (234)
T d1o5ia_ 73 NAGGPKAGFFDEL-TNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKT 151 (234)
T ss_dssp CCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred cccccCCcchhhh-hhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHH
Confidence 9999888888887 4699999999999999999999999997654 8999999999999999999999999999999999
Q ss_pred HHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 196 LRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 196 la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
++.|++++ ||||+|+||+++|++.+...... ..+......+.++..+|||+|++++||+++..+|+|.
T Consensus 152 lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~---~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG 220 (234)
T d1o5ia_ 152 LSFEVAPYGITVNCVAPGWTETERVKELLSEE---KKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTG 220 (234)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCTTHHHHSCHH---HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHhcccCeEEeecccCccchhhhhhhcCHH---HHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcC
Confidence 99999999 99999999999999876543211 2222344567889999999999999999998887764
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-43 Score=318.78 Aligned_cols=238 Identities=28% Similarity=0.336 Sum_probs=202.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d--------------~~~ 107 (349)
..|+||+|||||||+|||+++|++|+++|++|++++|++++++++.+++ .........+.+| .+.
T Consensus 10 ~~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (269)
T d1xu9a_ 10 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 89 (269)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 3489999999999999999999999999999999999999999988776 3445567777777 345
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
.|.+|+++||||......+.+. +.++|++++++|+.|++.++++++|+|++++|+||++||.++..+.|+.++|++||+
T Consensus 90 ~g~~~~li~nag~~~~~~~~~~-~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKa 168 (269)
T d1xu9a_ 90 MGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKF 168 (269)
T ss_dssp HTSCSEEEECCCCCCCCCCCCS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred hCCccccccccccccccccccC-CHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHH
Confidence 6899999999999988888886 569999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC--C-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 188 ALVTFYESLRFELND--E-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 188 al~~l~~~la~el~~--~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
|+++|+++|+.|+++ . |+||+|+||+|+|+|........ ......+||++|+.++.....++..+
T Consensus 169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~------------~~~~~~~~e~~a~~i~~~~~~~~~~i 236 (269)
T d1xu9a_ 169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI------------VHMQAAPKEECALEIIKGGALRQEEV 236 (269)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG------------GGGGCBCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC------------ccccCCCHHHHHHHHHHHhhcCCCEE
Confidence 999999999999964 3 99999999999999875422111 11246789999999999999999999
Q ss_pred EcCchHHHHHHHHHhchHHHHHHHHHhcc
Q 039397 265 KFPSWYDVFLLYRVFAPHVLNWTFRLLIS 293 (349)
Q Consensus 265 ~~p~~~~~~~~~~~~~P~~~~~~~~~l~~ 293 (349)
..|.+.....+++.+.|.+.+++....+.
T Consensus 237 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 265 (269)
T d1xu9a_ 237 YYDSSLWTTLLIRNPSRKILEFLYSTSYN 265 (269)
T ss_dssp EECSCHHHHHHSCCHHHHHHHHHHGGGBC
T ss_pred EccHHHHHHHHHHHhHHHHHHHHHHhccC
Confidence 98877655555555556666666555544
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=1.3e-43 Score=320.27 Aligned_cols=222 Identities=23% Similarity=0.240 Sum_probs=183.5
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC---CCCeEEEEEec--------------cc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN---PINEVTLVSLN--------------NK 106 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~---~~~~~~~~~~d--------------~~ 106 (349)
.|+||+++||||++|||+++|++|+++|++|++++|++++++++.+++.. ...++..+.+| .+
T Consensus 1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999998888732 23467888998 45
Q ss_pred cCCCcceeeecCcCCCCcc--ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhH
Q 039397 107 ESKAVDHLVNTASLGHTFF--FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
++|++|+||||||...... ..+. +.|+|++++++|+.|+++++|+++|+|++++ |+|+++||.++..+.++.++|+
T Consensus 81 ~~G~iDilVnnAG~~~~~~~~~~~~-~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~ 159 (274)
T d1xhla_ 81 KFGKIDILVNNAGANLADGTANTDQ-PVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA 159 (274)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHH
T ss_pred HcCCceEEEeecccccccccccccC-CHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceeh
Confidence 6799999999999865543 3333 4588999999999999999999999997665 6777778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhh--hhH---HHHhhhcCCCCHHHHHHHHHHHH
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEM--QWK---EEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
+||+|+++|+++||.|++++ ||||+|+||+++|++...........+. .+. ....+.++..+|||+|++++||+
T Consensus 160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~ 239 (274)
T d1xhla_ 160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 239 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHc
Confidence 99999999999999999999 9999999999999987654322211111 111 12346788999999999999999
Q ss_pred hc-CCceEEc
Q 039397 258 CR-GDTYVKF 266 (349)
Q Consensus 258 ~~-~~~~i~~ 266 (349)
++ .++|+|.
T Consensus 240 S~d~s~~itG 249 (274)
T d1xhla_ 240 DRNLSSYIIG 249 (274)
T ss_dssp CHHHHTTCCS
T ss_pred CCccccCccC
Confidence 85 4666653
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.9e-43 Score=315.45 Aligned_cols=217 Identities=12% Similarity=0.058 Sum_probs=178.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCC-CCeEE-------EEEeccccCCCcceeeecCcC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNP-INEVT-------LVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~-~~~~~-------~~~~d~~~~g~iDvlVnnAg~ 120 (349)
|+|||||++|||+++|++|+++|++|++++|+.++++++....... ..++. .++.-.+++|++|+||||||+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 7999999999999999999999999999999988877665433111 11110 000115678999999999998
Q ss_pred CC-CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHH
Q 039397 121 GH-TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRF 198 (349)
Q Consensus 121 ~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~ 198 (349)
.. .+++.+. +.++|++++++|+.++++++|+++|+|++++ |+||++||.++..+.++..+|++||+|+++|+|+|+.
T Consensus 82 ~~~~~~~~~~-~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ 160 (252)
T d1zmta1 82 APEFQPIDKY-AVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSK 160 (252)
T ss_dssp CCCCCCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChhhC-CHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHH
Confidence 65 4677776 5699999999999999999999999997665 9999999999999999999999999999999999999
Q ss_pred HhcCC-eeEEEEecCcccCCCCCCccccccc----hhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 199 ELNDE-VGITIATHGWIGIEMTKGKFMLEDG----AEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 199 el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
|++++ ||||+|+||+++|++.......... ..........++++..+|||+|++++||+++..+|+|.
T Consensus 161 ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG 233 (252)
T d1zmta1 161 ELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTG 233 (252)
T ss_dssp HHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTT
T ss_pred HhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 99999 9999999999999998765432211 11222344567789999999999999999999888753
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-42 Score=311.30 Aligned_cols=219 Identities=18% Similarity=0.164 Sum_probs=186.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~ 106 (349)
.+|+||+|||||||+|||+++|+.|+++|++|++++|++++++++.+++.. ....+..+.|| .+
T Consensus 6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~ 85 (257)
T d1xg5a_ 6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 85 (257)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 459999999999999999999999999999999999999999999888843 33578888999 46
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC---CCeEEEEeccccccC--CCCchh
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES---NGRVVVNASVENWLP--LPRMSL 181 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---~g~IV~isS~~~~~~--~~~~~~ 181 (349)
++|++|+||||||....+++++. +.++|++.+++|+.|+++++++++|.|+++ +|+||++||.++... .++...
T Consensus 86 ~~g~iD~lVnnAg~~~~~~~~~~-~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~ 164 (257)
T d1xg5a_ 86 QHSGVDICINNAGLARPDTLLSG-STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF 164 (257)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred hcCCCCEEEecccccCCCccccc-cHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHH
Confidence 68999999999999999999987 469999999999999999999999998653 489999999998754 456678
Q ss_pred hHHHHHHHHHHHHHHHHHh--cCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 182 YASAKAALVTFYESLRFEL--NDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el--~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
|+++|+|+.+|+++|+.|+ +++ |+||+|+||+++|++....... ..+......+..+..+|||+|++++++++
T Consensus 165 Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~----~~~~~~~~~~~~r~~~pedvA~~v~fL~s 240 (257)
T d1xg5a_ 165 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK----DPEKAAATYEQMKCLKPEDVAEAVIYVLS 240 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT----CHHHHHHHHC---CBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh----hHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 9999999999999999998 566 9999999999999987653221 12223445567789999999999999999
Q ss_pred cCCceEEc
Q 039397 259 RGDTYVKF 266 (349)
Q Consensus 259 ~~~~~i~~ 266 (349)
+..+++|.
T Consensus 241 ~~a~~itG 248 (257)
T d1xg5a_ 241 TPAHIQIG 248 (257)
T ss_dssp SCTTEEEE
T ss_pred ChhcCeEC
Confidence 99999875
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-42 Score=309.64 Aligned_cols=207 Identities=17% Similarity=0.216 Sum_probs=177.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCeEEEEEec--------------cccC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINEVTLVSLN--------------NKES 108 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~~~~d--------------~~~~ 108 (349)
.+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.. ...++..+.+| .+++
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 3799999999999999999999999999999999999999988888733 35578888999 4667
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCCchhhHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
|++|+||||||+. ..++|++++++|+.+++++++.++|+|+++ +|+||++||.++..+.|+.++|++
T Consensus 81 G~iDilVnnAg~~---------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 151 (254)
T d2gdza1 81 GRLDILVNNAGVN---------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA 151 (254)
T ss_dssp SCCCEEEECCCCC---------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred CCcCeeccccccc---------ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence 9999999999985 346799999999999999999999999754 378999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHhcCC-eeEEEEecCcccCCCCCCccccccch----hhhhHHHHhhhcCCCCHHHHHHHHHHHH
Q 039397 185 AKAALVTFYES--LRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA----EMQWKEEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 185 sKaal~~l~~~--la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
||+|+.+|+|+ |+.|++++ ||||+|+||+++|+|.+......... ..+......+.++..+|||+|+++++++
T Consensus 152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~ 231 (254)
T d2gdza1 152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 231 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 99999999997 78899999 99999999999999986643321110 1112233456778999999999999999
Q ss_pred hcC
Q 039397 258 CRG 260 (349)
Q Consensus 258 ~~~ 260 (349)
+++
T Consensus 232 s~~ 234 (254)
T d2gdza1 232 EDD 234 (254)
T ss_dssp HCT
T ss_pred cCC
Confidence 975
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.2e-42 Score=311.24 Aligned_cols=222 Identities=15% Similarity=0.119 Sum_probs=177.3
Q ss_pred cCCCCCCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------
Q 039397 40 FYSENMEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN------------- 104 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------------- 104 (349)
||+.||+||++||||||| |||+++|++|+++|++|++++|+++..++..+... .......+++|
T Consensus 1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~ 79 (256)
T d1ulua_ 1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAE-ALGGALLFRADVTQDEELDALFAG 79 (256)
T ss_dssp CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH-HTTCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhh-ccCcccccccccCCHHHHHHHHHH
Confidence 466799999999999986 99999999999999999999998765544333322 23355677888
Q ss_pred -cccCCCcceeeecCcCCCC----ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCc
Q 039397 105 -NKESKAVDHLVNTASLGHT----FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~ 179 (349)
.+++|++|+||||||+... ..+.+. +.++|++.+++|+.+++.++|+++|+|++ +|+||++||.++..+.|+.
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~-~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-~G~Iv~isS~~~~~~~~~~ 157 (256)
T d1ulua_ 80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDT-RRQDWLLALEVSAYSLVAVARRAEPLLRE-GGGIVTLTYYASEKVVPKY 157 (256)
T ss_dssp HHHHHSSEEEEEECCCCCCHHHHSSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEEEEEEECGGGTSBCTTC
T ss_pred HHHhcCCceEEEeccccccccccccchhhh-hhhhhhHhhhhhHHHHHHHHHHHHHHhcc-CCEEEEEeehHhcCCCCCc
Confidence 4667999999999998653 234554 45789999999999999999999999965 5899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
.+|++||+|+++|++++|.|++++ ||||+|+||+++|++........+ ..+......+.++..+|||+|++++||++
T Consensus 158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~--~~~~~~~~~pl~R~~~pedvA~~v~fL~S 235 (256)
T d1ulua_ 158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTK--MYDRVAQTAPLRRNITQEEVGNLGLFLLS 235 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHH--HHHHHHHHSTTSSCCCHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHH--HHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999999999 999999999999998765432111 22223445678899999999999999999
Q ss_pred cCCceEEc
Q 039397 259 RGDTYVKF 266 (349)
Q Consensus 259 ~~~~~i~~ 266 (349)
+..+|+|.
T Consensus 236 ~~s~~itG 243 (256)
T d1ulua_ 236 PLASGITG 243 (256)
T ss_dssp GGGTTCCS
T ss_pred chhCCccC
Confidence 98887764
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=1.2e-42 Score=311.64 Aligned_cols=222 Identities=17% Similarity=0.207 Sum_probs=185.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC-cchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR-ENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~-~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
+.|+||+||||||++|||+++|++|+++|++|++++|+ ++.++++.+++...+.++..+.+| .++
T Consensus 2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999997655 455677777776666688899999 457
Q ss_pred CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccc-ccCCCCchhhHHHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVEN-WLPLPRMSLYASAK 186 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~-~~~~~~~~~Y~asK 186 (349)
+|++|+||||||+...+++.+. +.++|++++++|+.++++++|+++|+|++ +|++++++|..+ ..+.|+...|++||
T Consensus 82 ~g~idilinnag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-~g~~iii~s~~~~~~~~~~~~~Y~asK 159 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEV-TQELFDKVFNLNTRGQFFVAQQGLKHCRR-GGRIILTSSIAAVMTGIPNHALYAGSK 159 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHEEE-EEEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred cCCCcEEEeccccccccccccc-hHHHHHHHHhhccceeeeehhhhhhhhhc-CCcccccccccccccCCCCchhHHHHH
Confidence 7999999999999988888886 46999999999999999999999999975 467777766655 45789999999999
Q ss_pred HHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccc---------cchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 187 AALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLE---------DGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 187 aal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
+|+++|+|+|+.|++++ ||||+|+||+++|+|.+...... ++...+......+.++..+|+|||++++||
T Consensus 160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL 239 (259)
T d1ja9a_ 160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 239 (259)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999998 99999999999999865422111 111112223456778999999999999999
Q ss_pred HhcCCceEEc
Q 039397 257 ACRGDTYVKF 266 (349)
Q Consensus 257 ~~~~~~~i~~ 266 (349)
+++..+++|.
T Consensus 240 ~S~~a~~itG 249 (259)
T d1ja9a_ 240 CQEESEWING 249 (259)
T ss_dssp HSGGGTTCCS
T ss_pred hCchhcCCcC
Confidence 9998888764
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-43 Score=310.37 Aligned_cols=218 Identities=19% Similarity=0.212 Sum_probs=184.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcce
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDH 113 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDv 113 (349)
+|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+.. .+....+| .+..+++|+
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~id~ 77 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-----GIQTRVLDVTKKKQIDQFANEVERLDV 77 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGST-----TEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcc-----CCceeeeecccccccccccccccccee
Confidence 499999999999999999999999999999999999998887765432 34455555 456689999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC-CCeEEEEeccccc-cCCCCchhhHHHHHHHHH
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES-NGRVVVNASVENW-LPLPRMSLYASAKAALVT 191 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~g~IV~isS~~~~-~~~~~~~~Y~asKaal~~ 191 (349)
||||||....+++.+. +.++|++.+++|+.++++++|+++|+|.++ .|+||+++|+++. .+.++..+|+++|+|+++
T Consensus 78 lVn~ag~~~~~~~~~~-~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~ 156 (245)
T d2ag5a1 78 LFNVAGFVHHGTVLDC-EEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIG 156 (245)
T ss_dssp EEECCCCCCCBCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHH
T ss_pred EEecccccCCCChhhC-CHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHH
Confidence 9999999999988887 569999999999999999999999998655 4899999998775 578999999999999999
Q ss_pred HHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchh--hhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEcC
Q 039397 192 FYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAE--MQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKFP 267 (349)
Q Consensus 192 l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~p 267 (349)
|+|+||.|++++ ||||+|+||+++|++............ ........+.++..+|||+|+.+.||+++..+++|..
T Consensus 157 l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~ 235 (245)
T d2ag5a1 157 LTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGN 235 (245)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCc
Confidence 999999999999 999999999999998765432222111 1122344577889999999999999999988887643
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-42 Score=311.87 Aligned_cols=224 Identities=24% Similarity=0.259 Sum_probs=176.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe---cCcch---hhhHHHHhcCCCCeEEEEEec------------cccC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVA---RRENR---LQGSTIDEYNPINEVTLVSLN------------NKES 108 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~---r~~~~---l~~~~~~~~~~~~~~~~~~~d------------~~~~ 108 (349)
.|+|||||||+|||+++|++|+++|++|+.++ |+.+. +++...++...+.++..+.+| ....
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 58999999999999999999999999866554 44333 334444555566789999999 2234
Q ss_pred CCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHH
Q 039397 109 KAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKA 187 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKa 187 (349)
|++|+||||||....+++++. +.++|++++++|+.|+++++++++|+|++++ |+||++||+++..+.|+.+.|++||+
T Consensus 82 g~idilvnnag~~~~~~~~~~-~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKa 160 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEAL-GEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKF 160 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGS-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred cchhhhhhcccccccccccch-hHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHH
Confidence 899999999999999999887 4699999999999999999999999998665 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccch--------hhhhH-----HHHhhhcCCCCHHHHHHHH
Q 039397 188 ALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGA--------EMQWK-----EEREVHVAGGPVEDFARLI 253 (349)
Q Consensus 188 al~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~~edvA~~i 253 (349)
|+++|+++|+.|++++ |+||+|+||+|+|+|.+......++. ..... ....+..+..+|||||++|
T Consensus 161 al~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v 240 (285)
T d1jtva_ 161 ALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVF 240 (285)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHH
Confidence 9999999999999999 99999999999999987654322110 00000 1122345688999999999
Q ss_pred HHHHhcCC---ceEEcCchHH
Q 039397 254 VSGACRGD---TYVKFPSWYD 271 (349)
Q Consensus 254 ~~l~~~~~---~~i~~p~~~~ 271 (349)
++++++++ +|++...++.
T Consensus 241 ~~~~~~~~p~~ry~~g~~~~~ 261 (285)
T d1jtva_ 241 LTALRAPKPTLRYFTTERFLP 261 (285)
T ss_dssp HHHHHCSSCCSEEESCSTTHH
T ss_pred HHHHhCCCCCeEEecHHHHHH
Confidence 99998875 4565555444
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.7e-43 Score=320.28 Aligned_cols=208 Identities=17% Similarity=0.118 Sum_probs=173.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc---------hhhhHHHHhcCCCCeEEEEEec--------
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN---------RLQGSTIDEYNPINEVTLVSLN-------- 104 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~---------~l~~~~~~~~~~~~~~~~~~~d-------- 104 (349)
+++|+||++|||||++|||+++|++|+++|++|++++|+.+ .++++..++............|
T Consensus 2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 81 (302)
T d1gz6a_ 2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV 81 (302)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHH
Confidence 56899999999999999999999999999999999987643 3444555553333333333333
Q ss_pred ---cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCch
Q 039397 105 ---NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMS 180 (349)
Q Consensus 105 ---~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~ 180 (349)
.+++|++|+||||||+...+++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++..+.++.+
T Consensus 82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~-~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~ 160 (302)
T d1gz6a_ 82 KTALDTFGRIDVVVNNAGILRDRSFSRI-SDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQA 160 (302)
T ss_dssp HHHHHHTSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCH
T ss_pred HHHHHHcCCCCEEEECCccCCCCChhhC-CHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcH
Confidence 4678999999999999999999997 5699999999999999999999999998655 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhc
Q 039397 181 LYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACR 259 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~ 259 (349)
+|++||+|+.+|+++|+.|++++ |+||+|+||++.|++..... +...+..+|||+|++++||+++
T Consensus 161 ~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~--------------~~~~~~~~PedvA~~v~fL~S~ 226 (302)
T d1gz6a_ 161 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP--------------EDLVEALKPEYVAPLVLWLCHE 226 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC--------------HHHHHHSCGGGTHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc--------------HhhHhcCCHHHHHHHHHHHcCC
Confidence 99999999999999999999999 99999999999887654321 1122456799999999999986
Q ss_pred CCceEE
Q 039397 260 GDTYVK 265 (349)
Q Consensus 260 ~~~~i~ 265 (349)
.. ++|
T Consensus 227 ~a-~it 231 (302)
T d1gz6a_ 227 SC-EEN 231 (302)
T ss_dssp TC-CCC
T ss_pred Cc-CCC
Confidence 54 443
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=5.7e-42 Score=303.67 Aligned_cols=213 Identities=22% Similarity=0.232 Sum_probs=178.3
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESK 109 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g 109 (349)
.|+||+||||||++|||+++|++|+++|++|++++|+++++++..+++ +.++..+++| .+++|
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~~~g 78 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG 78 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 589999999999999999999999999999999999998887766654 4577888999 45679
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|+||||||.....++.+. +.++|++++++|+.+++.++|+++|+|+++ +.|++ +|+.+..+.|+...|+++|+|+
T Consensus 79 ~iDiLinnAg~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~-~ss~a~~~~~~~~~Y~~sK~al 155 (241)
T d2a4ka1 79 RLHGVAHFAGVAHSALSWNL-PLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVL-TGSVAGLGAFGLAHYAAGKLGV 155 (241)
T ss_dssp CCCEEEEGGGGTTTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEE-ECCCTTCCHHHHHHHHHCSSHH
T ss_pred CccEeccccccccccchhhh-hccccccccccccccccccccccccccccc-cceee-ccccccccccCccccchhhHHH
Confidence 99999999999988888887 569999999999999999999999998653 45554 4545556668899999999999
Q ss_pred HHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 190 VTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 190 ~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
++|+++|+.|++++ ||||+|+||+++|++...... + .........+.++..+|||+|++++||+++..+|+|.
T Consensus 156 ~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~---~-~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG 229 (241)
T d2a4ka1 156 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP---W-AWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITG 229 (241)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH---H-HHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhH---h-HHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcC
Confidence 99999999999999 999999999999998865321 1 2222344567889999999999999999998888764
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.3e-41 Score=301.51 Aligned_cols=220 Identities=20% Similarity=0.143 Sum_probs=181.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHH---cCCeEEEEecCcchhhhHHHHh--cCCCCeEEEEEecc------------
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAK---RKANLVLVARRENRLQGSTIDE--YNPINEVTLVSLNN------------ 105 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~---~G~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~~~~d~------------ 105 (349)
..|+||+++|||||+|||+++|++|++ +|++|++++|++++++++.+++ ...+.++..+.||.
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 478999999999999999999999997 7999999999999999998887 33456788899991
Q ss_pred ------ccCCCcceeeecCcCCC---CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC---CeEEEEeccccc
Q 039397 106 ------KESKAVDHLVNTASLGH---TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN---GRVVVNASVENW 173 (349)
Q Consensus 106 ------~~~g~iDvlVnnAg~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---g~IV~isS~~~~ 173 (349)
...+.+|++|||||... .+++.+. +.++|++++++|+.|+++++|+++|+|++++ |+||++||.++.
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~-~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~ 160 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVN-DLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCC-CHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccC-CHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 13467999999999864 3345554 6689999999999999999999999998764 799999999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccch-hhhhHHHHhhhcCCCCHHHHHHH
Q 039397 174 LPLPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGA-EMQWKEEREVHVAGGPVEDFARL 252 (349)
Q Consensus 174 ~~~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~edvA~~ 252 (349)
.+.|++++|++||+|+++|+++|+.| ...||||+|+||+|+|+|.+......... .........+.++..+|||+|+.
T Consensus 161 ~~~~~~~~Y~asKaal~~lt~~la~e-~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~ 239 (259)
T d1oaaa_ 161 QPYKGWGLYCAGKAARDMLYQVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK 239 (259)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHH-CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHH
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhC-CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999 33399999999999999876432211111 11222334456788999999999
Q ss_pred HHHHHhcCCceEE
Q 039397 253 IVSGACRGDTYVK 265 (349)
Q Consensus 253 i~~l~~~~~~~i~ 265 (349)
+++++++. +|+|
T Consensus 240 i~~ll~~~-s~~T 251 (259)
T d1oaaa_ 240 LLGLLQKD-TFQS 251 (259)
T ss_dssp HHHHHHHC-CSCT
T ss_pred HHHHhhhc-cCCC
Confidence 99999874 4543
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=3.3e-41 Score=300.97 Aligned_cols=208 Identities=22% Similarity=0.215 Sum_probs=172.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEec---------------cc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN---------------NK 106 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d---------------~~ 106 (349)
++|+||+||||||++|||+++|++|+++|++|++++|+.++.++..+.. ......+....+| .+
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999887766554433 4455678888888 45
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC----CCeEEEEeccccccCCCCchhh
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES----NGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~g~IV~isS~~~~~~~~~~~~Y 182 (349)
++|++|+||||||.. +.+.|++++++|+.|+++++++++|+|.++ +|+||++||.++..+.+++++|
T Consensus 81 ~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y 151 (254)
T d1sbya1 81 QLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY 151 (254)
T ss_dssp HHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred HcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence 568999999999963 347899999999999999999999999654 3899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++||+|+.+|+++|+.|++++ ||||+|+||+|+|+|.+......+. . ..........+..+||++|+.++++++...
T Consensus 152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~e~va~~~~~~~~~~~ 229 (254)
T d1sbya1 152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDV-E-PRVAELLLSHPTQTSEQCGQNFVKAIEANK 229 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGS-C-TTHHHHHTTSCCEEHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhH-H-HHHHhccccCCCCCHHHHHHHHHHhhhCCC
Confidence 999999999999999999988 9999999999999987653221111 1 111223334467789999999999887653
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=5e-41 Score=303.18 Aligned_cols=223 Identities=20% Similarity=0.250 Sum_probs=186.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHhcCCCCeEEEEEec--------------cc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDEYNPINEVTLVSLN--------------NK 106 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~~~~~~~~~~~~~d--------------~~ 106 (349)
+.+|+||++||||||+|||+++|++|+++|++|++++|+. +.++++.+++...+.++..+.+| .+
T Consensus 13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 92 (272)
T d1g0oa_ 13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 92 (272)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence 4579999999999999999999999999999999999875 45666666665566688889999 46
Q ss_pred cCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc-cCCCCchhhHHH
Q 039397 107 ESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW-LPLPRMSLYASA 185 (349)
Q Consensus 107 ~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~-~~~~~~~~Y~as 185 (349)
.+|++|++|||+|.....++.+. +.++|++++++|+.++++++|+++|+|++ +|++++++|+.+. .+.++.+.|+++
T Consensus 93 ~~g~idilV~nag~~~~~~~~~~-~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-~g~~i~i~s~~~~~~~~~~~~~Y~as 170 (272)
T d1g0oa_ 93 IFGKLDIVCSNSGVVSFGHVKDV-TPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKAVPKHAVYSGS 170 (272)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred HhCCCCccccccccchhhhhhhh-hhhHHHHHhhhccceeeeecccccccccc-ccccccccccccccccccchhhHHHH
Confidence 67999999999999988888887 46899999999999999999999999975 5788888887654 467788999999
Q ss_pred HHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccc-------hhh--hhHHHHhhhcCCCCHHHHHHHHHH
Q 039397 186 KAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDG-------AEM--QWKEEREVHVAGGPVEDFARLIVS 255 (349)
Q Consensus 186 Kaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~~~edvA~~i~~ 255 (349)
|+|+++|+++||.|++++ ||||+|+||+++|++.+........ .+. .......+.++..+|||||+++++
T Consensus 171 Kaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~f 250 (272)
T d1g0oa_ 171 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF 250 (272)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence 999999999999999999 9999999999999986543221110 000 111234567899999999999999
Q ss_pred HHhcCCceEEc
Q 039397 256 GACRGDTYVKF 266 (349)
Q Consensus 256 l~~~~~~~i~~ 266 (349)
|+++..+|+|.
T Consensus 251 L~s~~s~~itG 261 (272)
T d1g0oa_ 251 LASNDGGWVTG 261 (272)
T ss_dssp HHSGGGTTCCS
T ss_pred HhCchhcCccC
Confidence 99998887764
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=2.1e-40 Score=302.38 Aligned_cols=225 Identities=16% Similarity=0.116 Sum_probs=187.6
Q ss_pred cCC-CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEec-------------
Q 039397 40 FYS-ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN------------- 104 (349)
Q Consensus 40 ~~~-~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d------------- 104 (349)
+|+ .+|+||+|||||||+|||+++|++|+++|++|++++|+.+++++..+++ ...+..+..+.+|
T Consensus 17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~ 96 (294)
T d1w6ua_ 17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE 96 (294)
T ss_dssp CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh
Confidence 443 4899999999999999999999999999999999999999998888776 3345677888888
Q ss_pred -cccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEeccccccCCCCchh
Q 039397 105 -NKESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNASVENWLPLPRMSL 181 (349)
Q Consensus 105 -~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~isS~~~~~~~~~~~~ 181 (349)
.+++|++|+||||||.....++.+. +.++|++++++|+.+.+.+.+...+.+.. .++.+++++|.++..+.++..+
T Consensus 97 ~~~~~g~iDilvnnAg~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~ 175 (294)
T d1w6ua_ 97 LIKVAGHPNIVINNAAGNFISPTERL-SPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP 175 (294)
T ss_dssp HHHHTCSCSEEEECCCCCCCSCGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHH
T ss_pred hhhhccccchhhhhhhhccccccccc-hhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccch
Confidence 4667999999999999988888876 46889999999999999999988877643 3478889999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 182 YASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
|++||+|+++|++++|.|++++ ||||+|+||+++|++........+. .........+.++..+|||+|+++.+|+++.
T Consensus 176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~-~~~~~~~~~pl~R~~~pediA~~v~fL~sd~ 254 (294)
T d1w6ua_ 176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT-FEKEMIGRIPCGRLGTVEELANLAAFLCSDY 254 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH-HHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHH-HHHHHhhcCCCCCCCCHHHHHHHHHHHhCch
Confidence 9999999999999999999999 9999999999999998765433222 2222344557889999999999999999998
Q ss_pred CceEEc
Q 039397 261 DTYVKF 266 (349)
Q Consensus 261 ~~~i~~ 266 (349)
.+|+|.
T Consensus 255 s~~itG 260 (294)
T d1w6ua_ 255 ASWING 260 (294)
T ss_dssp GTTCCS
T ss_pred hcCCCC
Confidence 887765
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-39 Score=288.63 Aligned_cols=214 Identities=16% Similarity=0.165 Sum_probs=170.3
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
.+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.. ......+| ....
T Consensus 1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (248)
T d2o23a1 1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN---NCVFAPADVTSEKDVQTALALAKGKF 77 (248)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT---TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC---Cccccccccccccccccccccccccc
Confidence 368999999999999999999999999999999999999999988877732 34444444 3445
Q ss_pred CCcceeeecCcCCCCcc------ccccCCcchHHHHHHhHhhhhHHHHHHhcccccc-------CCCeEEEEeccccccC
Q 039397 109 KAVDHLVNTASLGHTFF------FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE-------SNGRVVVNASVENWLP 175 (349)
Q Consensus 109 g~iDvlVnnAg~~~~~~------~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~~g~IV~isS~~~~~~ 175 (349)
+.+|.+++|+++...+. ..+. +.++|++++++|+.|+++++|+++|+|.+ ++|+||++||.++..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~ 156 (248)
T d2o23a1 78 GRVDVAVNCAGIAVASKTYNLKKGQTH-TLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 156 (248)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEEC-CHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred ccccccccccccccCCCcccccccccc-hHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence 67899999987765443 3333 45789999999999999999999998753 2489999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHH
Q 039397 176 LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIV 254 (349)
Q Consensus 176 ~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~ 254 (349)
.|+.++|++||+|+++|+++|+.|++++ ||||+|+||+++|+|........ ...+....+..++..+|||+|++++
T Consensus 157 ~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~---~~~~~~~~pl~~R~g~peevA~~v~ 233 (248)
T d2o23a1 157 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKV---CNFLASQVPFPSRLGDPAEYAHLVQ 233 (248)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSSSCSCBCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHH---HHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 9999999999999999999999999999 99999999999999987643211 1111222223478999999999999
Q ss_pred HHHhcCCceEE
Q 039397 255 SGACRGDTYVK 265 (349)
Q Consensus 255 ~l~~~~~~~i~ 265 (349)
++++. +|+|
T Consensus 234 fL~s~--~~it 242 (248)
T d2o23a1 234 AIIEN--PFLN 242 (248)
T ss_dssp HHHHC--TTCC
T ss_pred HHHhC--CCCC
Confidence 99974 4554
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.5e-38 Score=279.52 Aligned_cols=197 Identities=14% Similarity=0.088 Sum_probs=161.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------------cccCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------------NKESK 109 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------------~~~~g 109 (349)
+||+|||||||+|||+++|++|+++|++|+++++++.+... ......++ ....+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS----------ASVIVKMTDSFTEQADQVTAEVGKLLGDQ 70 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS----------EEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc----------ccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999999999999997654321 11111111 22345
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|+||||||........+..+.++|++++++|+.++++++++++|+|++ +|+||++||.++..+.|+..+|++||+|+
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal 149 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-GGLLTLAGAKAALDGTPGMIGYGMAKGAV 149 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-ccceeEEccHHHcCCccCCcccHHHHHHH
Confidence 79999999997655554443456889999999999999999999999965 59999999999999999999999999999
Q ss_pred HHHHHHHHHHhc--CC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 190 VTFYESLRFELN--DE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 190 ~~l~~~la~el~--~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
++|+++|+.|++ ++ |+||+|+||+++|+|.+...... ...++.+||++|+.+.+++++...+++
T Consensus 150 ~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~------------~~~~~~~pe~va~~~~~l~s~~~~~i~ 216 (236)
T d1dhra_ 150 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA------------DFSSWTPLEFLVETFHDWITGNKRPNS 216 (236)
T ss_dssp HHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS------------CGGGSEEHHHHHHHHHHHHTTTTCCCT
T ss_pred HHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccc------------hhhcCCCHHHHHHHHHHHhCCCccCCC
Confidence 999999999998 35 99999999999999865432111 123577899999999999998776653
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-38 Score=282.63 Aligned_cols=190 Identities=23% Similarity=0.237 Sum_probs=163.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iD 112 (349)
+++|||||++|||+++|++|+++ |++|++++|++++++++.+++...+.++.++.+| .+++|+||
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD 83 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD 83 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence 46699999999999999999986 8999999999999999998886556678889999 45679999
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC----------------
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL---------------- 176 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~---------------- 176 (349)
+||||||+.......+. +.++|++++++|++|+++++++++|+|++ +|+||++||+.+..+.
T Consensus 84 iLVnNAGi~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~ 161 (275)
T d1wmaa1 84 VLVNNAGIAFKVADPTP-FHIQAEVTMKTNFFGTRDVCTELLPLIKP-QGRVVNVSSIMSVRALKSCSPELQQKFRSETI 161 (275)
T ss_dssp EEEECCCCCCCTTCCSC-HHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred EEEEcCCcCCCCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccccccceeccccccchhhhhhhccccc
Confidence 99999999888777775 45889999999999999999999999965 5899999998764322
Q ss_pred -------------------------CCchhhHHHHHHHHHHHHHHHHHhcC----C-eeEEEEecCcccCCCCCCccccc
Q 039397 177 -------------------------PRMSLYASAKAALVTFYESLRFELND----E-VGITIATHGWIGIEMTKGKFMLE 226 (349)
Q Consensus 177 -------------------------~~~~~Y~asKaal~~l~~~la~el~~----~-I~v~~v~PG~v~T~~~~~~~~~~ 226 (349)
....+|++||+|+.+|++.++.||++ . |+||+|+||+|+|+|....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~---- 237 (275)
T d1wmaa1 162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK---- 237 (275)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT----
T ss_pred chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc----
Confidence 22457999999999999999999854 3 9999999999999997642
Q ss_pred cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHh
Q 039397 227 DGAEMQWKEEREVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~ 258 (349)
...+|||+|+.+++++.
T Consensus 238 ---------------~~~~pee~A~~~~~~a~ 254 (275)
T d1wmaa1 238 ---------------ATKSPEEGAETPVYLAL 254 (275)
T ss_dssp ---------------CSBCHHHHTHHHHHHHS
T ss_pred ---------------ccCCHHHHHHHHHHHHc
Confidence 23479999999999874
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=1.1e-36 Score=270.87 Aligned_cols=173 Identities=16% Similarity=0.227 Sum_probs=149.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHH---HcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------------ccc
Q 039397 47 DKVVIITGASSDIGEQIAYEYA---KRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------------NKE 107 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la---~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------------~~~ 107 (349)
.|+|||||||+|||+++|++|+ ++|++|++++|++++++++.+.... ..++..+.+| ...
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-HSNIHILEIDLRNFDAYDKLVADIEGVTK 80 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-CTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc-CCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence 3799999999999999999996 5799999999999998876543333 3578889998 125
Q ss_pred CCCcceeeecCcCCCCcc-ccccCCcchHHHHHHhHhhhhHHHHHHhccccccC------------CCeEEEEecccccc
Q 039397 108 SKAVDHLVNTASLGHTFF-FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES------------NGRVVVNASVENWL 174 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~------------~g~IV~isS~~~~~ 174 (349)
++++|+||||||+..... +.+. +.++|++++++|+.|++.++++++|+|+++ +|+||+++|+.+..
T Consensus 81 ~~~iDiLvnNAg~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 81 DQGLNVLFNNAGIAPKSARITAV-RSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp GGCCSEEEECCCCCCCCCCGGGC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred cCCcceEEeeccccccCcccccC-CHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 689999999999876654 5454 568899999999999999999999999753 48999999998764
Q ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCC
Q 039397 175 ---PLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKG 221 (349)
Q Consensus 175 ---~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~ 221 (349)
+.++..+|++||+|+.+|+++++.|++++ |+||+|+||+|+|+|...
T Consensus 160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~ 210 (248)
T d1snya_ 160 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS 210 (248)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccc
Confidence 45677899999999999999999999998 999999999999999864
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-36 Score=272.57 Aligned_cols=219 Identities=14% Similarity=0.063 Sum_probs=176.5
Q ss_pred CCCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.|+||++|||||++ |||+++|+.|+++|++|++++|+++..+...+..... ........| .+.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL-GSDIVLQCDVAEDASIDTMFAELGKV 80 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhc-CCcceeecccchHHHHHHHHHHhhhc
Confidence 47899999999998 8999999999999999999999976554443322222 233344444 567
Q ss_pred CCCcceeeecCcCCCCcccc----ccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhH
Q 039397 108 SKAVDHLVNTASLGHTFFFE----EVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYA 183 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~ 183 (349)
.+++|++||||+........ +....+.|...+++|+.+.+.+++++.|.|.+ ++.||++||..+..+.|+...|+
T Consensus 81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Ii~iss~~~~~~~~~~~~Y~ 159 (258)
T d1qsga_ 81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-GSALLTLSYLGAERAIPNYNVMG 159 (258)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEEECGGGTSBCTTTTHHH
T ss_pred ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-CcEEEEecchhhccCCCCcHHHH
Confidence 78999999999986554432 22344678999999999999999999999954 56899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 184 SAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
+||+|+++|+++++.|++++ ||||+|+||+++|++....... ...........+.++..+|||+|+++.||+++..+
T Consensus 160 ~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~ 237 (258)
T d1qsga_ 160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF--RKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA 237 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH--HHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchh--hhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 99999999999999999999 9999999999999987653221 11222234456788999999999999999999887
Q ss_pred eEEc
Q 039397 263 YVKF 266 (349)
Q Consensus 263 ~i~~ 266 (349)
+++.
T Consensus 238 ~itG 241 (258)
T d1qsga_ 238 GISG 241 (258)
T ss_dssp TCCS
T ss_pred CccC
Confidence 7764
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.2e-36 Score=281.40 Aligned_cols=219 Identities=12% Similarity=0.055 Sum_probs=167.9
Q ss_pred CCCEEEEeC--CCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHH--------h-cCC---CCeEEEEEec-------
Q 039397 46 EDKVVIITG--ASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID--------E-YNP---INEVTLVSLN------- 104 (349)
Q Consensus 46 ~~k~vlVTG--as~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~--------~-~~~---~~~~~~~~~d------- 104 (349)
++|++|||| +++|||+++|++|+++|++|++++++.......... . ... ........+|
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 479999999 668999999999999999999999876543322211 1 000 1111222221
Q ss_pred ---------------------------cccCCCcceeeecCcCCCC--ccccccCCcchHHHHHHhHhhhhHHHHHHhcc
Q 039397 105 ---------------------------NKESKAVDHLVNTASLGHT--FFFEEVTDTSIFPRLLDINFWGNVYPTFVALP 155 (349)
Q Consensus 105 ---------------------------~~~~g~iDvlVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 155 (349)
.+++|+||+||||||.... +++.+. +.++|++++++|+++.+.++|+++|
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~-~~~~~~~~~~vn~~~~~~~~k~~~~ 159 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNT-SRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhh-hhhhhhhhcccchhHHHHHHHHHHh
Confidence 3456999999999998653 467775 5689999999999999999999999
Q ss_pred ccccCCCeEEEEeccccccCCCC-chhhHHHHHHHHHHHHHHHHHhcC-C-eeEEEEecCcccCCCCCCcc---------
Q 039397 156 YLHESNGRVVVNASVENWLPLPR-MSLYASAKAALVTFYESLRFELND-E-VGITIATHGWIGIEMTKGKF--------- 223 (349)
Q Consensus 156 ~m~~~~g~IV~isS~~~~~~~~~-~~~Y~asKaal~~l~~~la~el~~-~-I~v~~v~PG~v~T~~~~~~~--------- 223 (349)
+|++ +|+||++||.++..+.|+ ...|++||+|+++|+|+|+.||++ + ||||+|+||+|+|+......
T Consensus 160 ~m~~-~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~ 238 (329)
T d1uh5a_ 160 IMKP-QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN 238 (329)
T ss_dssp GEEE-EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---------
T ss_pred hccc-ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhh
Confidence 9954 689999999999999887 568999999999999999999986 4 99999999999995433210
Q ss_pred --------------------------------ccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 224 --------------------------------MLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 224 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
...............++++..+|||+|++++||+++..+|||.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTG 313 (329)
T d1uh5a_ 239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITG 313 (329)
T ss_dssp ---------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred hhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccC
Confidence 0000111222244557889999999999999999998888764
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.3e-36 Score=268.21 Aligned_cols=191 Identities=16% Similarity=0.116 Sum_probs=155.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------------cccCCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------------NKESKA 110 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------------~~~~g~ 110 (349)
.++||||||++|||+++|++|+++|++|++++|++++.... .....+| ..++|+
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 71 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS----------NILVDGNKNWTEQEQSILEQTASSLQGSQ 71 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSE----------EEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccc----------cceeccccCchhHHHHHHHHHHHHhcCCC
Confidence 34679999999999999999999999999999987653221 1111111 235789
Q ss_pred cceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHH
Q 039397 111 VDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALV 190 (349)
Q Consensus 111 iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~ 190 (349)
+|+||||||+.......+..+.++|+.++++|+.+++.++|+++|+|++ +|+||++||.++..+.|+..+|++||+|++
T Consensus 72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaal~ 150 (235)
T d1ooea_ 72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-GGLLQLTGAAAAMGPTPSMIGYGMAKAAVH 150 (235)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-ceEEEEeccHHhcCCcccccchHHHHHHHH
Confidence 9999999998666544443345789999999999999999999999965 589999999999999999999999999999
Q ss_pred HHHHHHHHHhcC--C-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 191 TFYESLRFELND--E-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 191 ~l~~~la~el~~--~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
+|+++|+.|++. . |+||+|+||+++|++.+...... ...+..+||++|+.+++++..+
T Consensus 151 ~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~------------~~~~~~~~~~va~~~~~~l~~~ 211 (235)
T d1ooea_ 151 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA------------DHSSWTPLSFISEHLLKWTTET 211 (235)
T ss_dssp HHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC------------CGGGCBCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCC------------ccccCCCHHHHHHHHHHHhcCc
Confidence 999999999983 4 99999999999999876432211 1235778999999998766554
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=6.5e-36 Score=272.60 Aligned_cols=222 Identities=14% Similarity=0.078 Sum_probs=169.3
Q ss_pred CCCCCCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCcchhhhHHH---------HhcC---CCCeEEEEEec--
Q 039397 41 YSENMEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRENRLQGSTI---------DEYN---PINEVTLVSLN-- 104 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~---------~~~~---~~~~~~~~~~d-- 104 (349)
|+++|+||++|||||++ |||+++|++|+++|++|++++|+......... .+.. .........+|
T Consensus 2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 67899999999999875 99999999999999999999997543221111 0000 00111112221
Q ss_pred --------------------------------cccCCCcceeeecCcCCC--CccccccCCcchHHHHHHhHhhhhHHHH
Q 039397 105 --------------------------------NKESKAVDHLVNTASLGH--TFFFEEVTDTSIFPRLLDINFWGNVYPT 150 (349)
Q Consensus 105 --------------------------------~~~~g~iDvlVnnAg~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 150 (349)
.+++|++|+||||||... ..++.+. +.++|++++++|+.++++++
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~-~~~~~~~~~~vn~~~~~~~~ 160 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLET-SRKGYLAAISASSYSFVSLL 160 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGC-CHHHHHHHHHHHTHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhh-hcccccccccchhhhhhhhh
Confidence 345689999999999864 4567776 56899999999999999999
Q ss_pred HHhccccccCCCeEEEEeccccc-cCCCCchhhHHHHHHHHHHHHHHHHHhc-CC-eeEEEEecCcccCCCCCCcccccc
Q 039397 151 FVALPYLHESNGRVVVNASVENW-LPLPRMSLYASAKAALVTFYESLRFELN-DE-VGITIATHGWIGIEMTKGKFMLED 227 (349)
Q Consensus 151 ~~~lp~m~~~~g~IV~isS~~~~-~~~~~~~~Y~asKaal~~l~~~la~el~-~~-I~v~~v~PG~v~T~~~~~~~~~~~ 227 (349)
++++|+|.++ |++++++|.++. ...+....|+++|+++.++++.++.|++ ++ ||||+|+||+++|++.......
T Consensus 161 ~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~-- 237 (297)
T d1d7oa_ 161 SHFLPIMNPG-GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI-- 237 (297)
T ss_dssp HHHGGGEEEE-EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH--
T ss_pred hHHHHHhhcC-CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCC--
Confidence 9999998654 556666555544 4567788999999999999999999996 45 9999999999999998754221
Q ss_pred chhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 228 GAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
+...+......++++..+|||+|++++||+++..+|+|.
T Consensus 238 ~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itG 276 (297)
T d1d7oa_ 238 DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITG 276 (297)
T ss_dssp HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence 112233345567889999999999999999998887764
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=6.5e-36 Score=266.18 Aligned_cols=193 Identities=22% Similarity=0.239 Sum_probs=150.6
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKES 108 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~ 108 (349)
|+.|+|||||||+|||+++|++|+++|+ +|++++|++++++++.+. ...++..+.+| .+.+
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 77 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh---hCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence 5679999999999999999999999996 689999999888765432 34568888998 2233
Q ss_pred C--CcceeeecCcCCCC-ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC------------CCeEEEEeccccc
Q 039397 109 K--AVDHLVNTASLGHT-FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES------------NGRVVVNASVENW 173 (349)
Q Consensus 109 g--~iDvlVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~------------~g~IV~isS~~~~ 173 (349)
+ ++|+||||||+... .++.+. +.++|++++++|+.|+++++++++|+|+++ .|++++++|..+.
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~ 156 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEP-NRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCC-CHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred CCCCeEEEEEcCcccCCCCccccC-CHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence 3 59999999998765 445554 568999999999999999999999999643 2789999887665
Q ss_pred cC-------CCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCC
Q 039397 174 LP-------LPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGP 245 (349)
Q Consensus 174 ~~-------~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
.. ..+..+|++||+|+.+|+++|+.|++++ |+||+|+||+|+|+|.... ...+
T Consensus 157 ~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-------------------~~~~ 217 (250)
T d1yo6a1 157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-------------------AALT 217 (250)
T ss_dssp STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred ccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-------------------CCCC
Confidence 43 2345679999999999999999999988 9999999999999987531 3457
Q ss_pred HHHHHHHHHHHHhcC
Q 039397 246 VEDFARLIVSGACRG 260 (349)
Q Consensus 246 ~edvA~~i~~l~~~~ 260 (349)
||+.|+.++..+.+.
T Consensus 218 ~e~~a~~~~~~~~~~ 232 (250)
T d1yo6a1 218 VEQSTAELISSFNKL 232 (250)
T ss_dssp -HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcC
Confidence 899999999998764
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=4.2e-35 Score=265.41 Aligned_cols=212 Identities=16% Similarity=0.088 Sum_probs=161.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc-chhhhHHHHh-cCCCCeEEEEEec---------------------
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRE-NRLQGSTIDE-YNPINEVTLVSLN--------------------- 104 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~-~~l~~~~~~~-~~~~~~~~~~~~d--------------------- 104 (349)
.++|||||++|||+++|++|+++|++|++++|+. +.++++.+++ .........+++|
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 4899999999999999999999999999988764 4455555555 2223344444444
Q ss_pred ----------cccCCCcceeeecCcCCCCccccccCCcchHH--------------HHHHhHhhhhHHHHHHhcccc---
Q 039397 105 ----------NKESKAVDHLVNTASLGHTFFFEEVTDTSIFP--------------RLLDINFWGNVYPTFVALPYL--- 157 (349)
Q Consensus 105 ----------~~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~--------------~~~~vN~~g~~~l~~~~lp~m--- 157 (349)
.+++|++|+||||||+..+.++.+.+ .++|+ .++++|+.++++++|++.+.+
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRND-EDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC--------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCC-HHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 24569999999999998888777653 34443 578999999999999877653
Q ss_pred ---ccC-CCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhh
Q 039397 158 ---HES-NGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQ 232 (349)
Q Consensus 158 ---~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~ 232 (349)
.+. .|+||+++|..+..+.++..+|++||+|+++|+++|+.|++++ ||||+|+||++.+..... +. ..+
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~-----~~-~~~ 235 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP-----PA-VWE 235 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSC-----HH-HHH
T ss_pred HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCC-----HH-HHH
Confidence 332 3789999999999999999999999999999999999999999 999999999865432211 11 111
Q ss_pred hHHHHhh-hcCCCCHHHHHHHHHHHHhcCCceEEc
Q 039397 233 WKEEREV-HVAGGPVEDFARLIVSGACRGDTYVKF 266 (349)
Q Consensus 233 ~~~~~~~-~~~~~~~edvA~~i~~l~~~~~~~i~~ 266 (349)
......+ .++..+|||+|++++||+++..+|+|.
T Consensus 236 ~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG 270 (284)
T d1e7wa_ 236 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITG 270 (284)
T ss_dssp HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccC
Confidence 1222233 478999999999999999998887764
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=7.7e-35 Score=257.37 Aligned_cols=201 Identities=18% Similarity=0.192 Sum_probs=155.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------------cccCCCcce
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------------NKESKAVDH 113 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------------~~~~g~iDv 113 (349)
+|++||||||+|||+++|++|+++|++|++++|+++..+. ...++| .......|.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~------------~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 68 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDL------------IYVEGDVTREEDVRRAVARAQEEAPLFA 68 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSS------------EEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccccc------------eEeeccccchhhhHHHHHhhhccccccc
Confidence 5899999999999999999999999999999998765432 222233 222334566
Q ss_pred eeecCcCCCCc----cccccCCcchHHHHHHhHhhhhHHHHHHhccc------ccc-CCCeEEEEeccccccCCCCchhh
Q 039397 114 LVNTASLGHTF----FFEEVTDTSIFPRLLDINFWGNVYPTFVALPY------LHE-SNGRVVVNASVENWLPLPRMSLY 182 (349)
Q Consensus 114 lVnnAg~~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~------m~~-~~g~IV~isS~~~~~~~~~~~~Y 182 (349)
+++++++.... .... .+.+.|++++++|+.+++.+++.+.+. |.+ +.|+||++||.++..+.++.++|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y 147 (241)
T d1uaya_ 69 VVSAAGVGLAEKILGKEGP-HGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 147 (241)
T ss_dssp EEECCCCCCCCCSBCSSSB-CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred hhhhhhccccccccccccc-hhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence 66666654332 2223 245789999999999999999999887 333 34899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 183 ASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
++||+|+++|+++|+.|++++ ||||+|+||+++|++........ .........+.++..+|||+|++++||+++
T Consensus 148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~R~g~pedvA~~v~fL~s~-- 222 (241)
T d1uaya_ 148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA---KASLAAQVPFPPRLGRPEEYAALVLHILEN-- 222 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH---HHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhH---HHHHHhcCCCCCCCcCHHHHHHHHHHHHhC--
Confidence 999999999999999999999 99999999999999876543211 111112223347889999999999999984
Q ss_pred ceEE
Q 039397 262 TYVK 265 (349)
Q Consensus 262 ~~i~ 265 (349)
+|+|
T Consensus 223 ~~iT 226 (241)
T d1uaya_ 223 PMLN 226 (241)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 4544
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=7.5e-34 Score=256.00 Aligned_cols=219 Identities=17% Similarity=0.158 Sum_probs=163.1
Q ss_pred CCCCCEEEEeCCCc--hHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------ccc
Q 039397 44 NMEDKVVIITGASS--DIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKE 107 (349)
Q Consensus 44 ~l~~k~vlVTGas~--GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~ 107 (349)
.|+||++|||||+| |||+++|++|+++|++|++++|+++ +++..+++...........+| .+.
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 80 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence 37899999999875 9999999999999999999999954 333444442223344455666 566
Q ss_pred CCCcceeeecCcCCCCccccccCC---cchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHH
Q 039397 108 SKAVDHLVNTASLGHTFFFEEVTD---TSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYAS 184 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~~~---~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~a 184 (349)
+|++|++|||+|........+..+ .+.+...+.++..+.....+...+.+ +.++.|+++||.+...+.+....|++
T Consensus 81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~~~~~~~~~~~~~y~a 159 (274)
T d2pd4a1 81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL-NNGASVLTLSYLGSTKYMAHYNVMGL 159 (274)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred cCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc-ccCcceeeecccccccccccchhhhH
Confidence 899999999999876544333222 23334444455555555556555554 23356777788888888899999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 185 AKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
+|+|+++++++++.|++++ ||||+|+||+++|++.......+ ..........+.++..+|||+|+.+++++++...+
T Consensus 160 sK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~--~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~ 237 (274)
T d2pd4a1 160 AKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFR--MILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG 237 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHH--HHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchH--HHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCC
Confidence 9999999999999999999 99999999999999876543221 12233345567889999999999999999998777
Q ss_pred EEc
Q 039397 264 VKF 266 (349)
Q Consensus 264 i~~ 266 (349)
+|.
T Consensus 238 itG 240 (274)
T d2pd4a1 238 VSG 240 (274)
T ss_dssp CCS
T ss_pred CcC
Confidence 654
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=9.9e-34 Score=253.83 Aligned_cols=213 Identities=18% Similarity=0.113 Sum_probs=165.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchh-hhHHHHh-cCCCCeEEEEEec------------------ccc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL-QGSTIDE-YNPINEVTLVSLN------------------NKE 107 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l-~~~~~~~-~~~~~~~~~~~~d------------------~~~ 107 (349)
.++||||||+|||+++|++|+++|++|++++|+.++. +++.+++ ...........+| .++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999997654 4555555 2333455555443 346
Q ss_pred CCCcceeeecCcCCCCcccccc----------CCcchHHHHHHhHhhhhHHHHHHhcccccc------CCCeEEEEeccc
Q 039397 108 SKAVDHLVNTASLGHTFFFEEV----------TDTSIFPRLLDINFWGNVYPTFVALPYLHE------SNGRVVVNASVE 171 (349)
Q Consensus 108 ~g~iDvlVnnAg~~~~~~~~~~----------~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~------~~g~IV~isS~~ 171 (349)
+|++|+||||||+..+..+.+. ...+.+...+.+|+.+.+...+...+.+.. ..+.+++++|..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 7899999999999776544321 112446788899999999999988888743 236888999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhc-CCCCHHHH
Q 039397 172 NWLPLPRMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHV-AGGPVEDF 249 (349)
Q Consensus 172 ~~~~~~~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~edv 249 (349)
+..+.|+...|++||+|+++|+++++.|++++ ||||+|+||+++|++.... . ..+......+.+ +..+|||+
T Consensus 162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~-----~-~~~~~~~~~pl~r~~~~peev 235 (266)
T d1mxha_ 162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ-----E-TQEEYRRKVPLGQSEASAAQI 235 (266)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH-----H-HHHHHHTTCTTTSCCBCHHHH
T ss_pred ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH-----H-HHHHHHhcCCCCCCCCCHHHH
Confidence 99999999999999999999999999999999 9999999999999875431 1 111112223443 45799999
Q ss_pred HHHHHHHHhcCCceEEc
Q 039397 250 ARLIVSGACRGDTYVKF 266 (349)
Q Consensus 250 A~~i~~l~~~~~~~i~~ 266 (349)
|++++||+++...|++.
T Consensus 236 a~~v~fL~s~~s~~itG 252 (266)
T d1mxha_ 236 ADAIAFLVSKDAGYITG 252 (266)
T ss_dssp HHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHhCchhCCccC
Confidence 99999999998777654
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=9.4e-33 Score=247.83 Aligned_cols=218 Identities=17% Similarity=0.111 Sum_probs=169.4
Q ss_pred CCCCCEEEEeCC--CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----------------
Q 039397 44 NMEDKVVIITGA--SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------------- 104 (349)
Q Consensus 44 ~l~~k~vlVTGa--s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------------- 104 (349)
.|+||++||||| ++|||+++|++|+++|++|++++|+++++.+...+. .+.+...+++|
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~--~~~~~~~~~~dv~~~~~~~~~~~~v~~~ 80 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR--LPAKAPLLELDVQNEEHLASLAGRVTEA 80 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT--SSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH--cCCceeeEeeecccccccccccchhhhc
Confidence 479999999995 579999999999999999999999988765433332 23445567777
Q ss_pred cccCCCcceeeecCcCCCCc-----cccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCc
Q 039397 105 NKESKAVDHLVNTASLGHTF-----FFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRM 179 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~~~~~-----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~ 179 (349)
....+.+|++|||||+.... ++.+. +.++|.+.+++|+.+.+...+.+.+++. .+.+++++|.....+.|+.
T Consensus 81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~p~~ 157 (268)
T d2h7ma1 81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDA-PYADVSKGIHISAYSYASMAKALLPIMN--PGGSIVGMDFDPSRAMPAY 157 (268)
T ss_dssp HCTTCCEEEEEECCCCCCGGGSTTSCGGGC-CHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECCCSSCCTTT
T ss_pred cccCCCcceeeecccccCcccccccccccc-chhhhhhhhhhhhhHHHHHHHHHhhhcc--cccccccccccccccCccc
Confidence 23468899999999976432 34444 4578999999999999999999988763 3456777788888899999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhh--------hhHHHHhhh-cCCCCHHHH
Q 039397 180 SLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEM--------QWKEEREVH-VAGGPVEDF 249 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~edv 249 (349)
..|+++|+|+.+|+++++.|++++ ||||+|+||+++|++............. +......+. .+..+|||+
T Consensus 158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dv 237 (268)
T d2h7ma1 158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPV 237 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHH
T ss_pred chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHH
Confidence 999999999999999999999999 9999999999999987543222111110 111122333 348899999
Q ss_pred HHHHHHHHhcCCceEEc
Q 039397 250 ARLIVSGACRGDTYVKF 266 (349)
Q Consensus 250 A~~i~~l~~~~~~~i~~ 266 (349)
|+++.+++++..+++|.
T Consensus 238 a~~v~fL~Sd~a~~iTG 254 (268)
T d2h7ma1 238 AKTVCALLSDWLPATTG 254 (268)
T ss_dssp HHHHHHHHSSSCTTCCS
T ss_pred HHHHHHHhCchhcCccC
Confidence 99999999998887653
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.97 E-value=5e-33 Score=248.04 Aligned_cols=207 Identities=17% Similarity=0.167 Sum_probs=141.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhh-HHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQG-STIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFF 126 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~ 126 (349)
|+||||||++|||+++|++|+++|++|++++|++++..+ +.... .........+.+..+.+|++|||||+..
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~~---~~~~~~~~~~~~~~~~id~lv~~Ag~~~---- 74 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAE---GRKQAIADVLAKCSKGMDGLVLCAGLGP---- 74 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHH---HHHHHHHHHHTTCTTCCSEEEECCCCCT----
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHhcCHH---HHHHHHHHHHHHhCCCCcEEEEcCCCCC----
Confidence 899999999999999999999999999999998654321 11000 0000011222455678999999999753
Q ss_pred cccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEec---------------------------cccccCC-C
Q 039397 127 EEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNAS---------------------------VENWLPL-P 177 (349)
Q Consensus 127 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS---------------------------~~~~~~~-~ 177 (349)
..+.+....++|..+...+.+...+.+.+.. +.+.++++ +.+..+. +
T Consensus 75 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~ 150 (257)
T d1fjha_ 75 ----QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQG 150 (257)
T ss_dssp ----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTH
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCc
Confidence 2356788999999999999998887764432 44444443 3333322 2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCC-eeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHH
Q 039397 178 RMSLYASAKAALVTFYESLRFELNDE-VGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSG 256 (349)
Q Consensus 178 ~~~~Y~asKaal~~l~~~la~el~~~-I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l 256 (349)
+..+|++||+|+++|+|+|+.||+++ ||||+|+||+++|++.+......+. ...+.+...+.++..+|||+|++++||
T Consensus 151 ~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~-~~~~~~~~~PlgR~g~p~eva~~v~fL 229 (257)
T d1fjha_ 151 GNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY-GESIAKFVPPMGRRAEPSEMASVIAFL 229 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSCCCTHHHHHHHHHH
T ss_pred chHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHH-HHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 45579999999999999999999999 9999999999999998765432221 112223335788999999999999999
Q ss_pred HhcCCceEEc
Q 039397 257 ACRGDTYVKF 266 (349)
Q Consensus 257 ~~~~~~~i~~ 266 (349)
+++...|+|.
T Consensus 230 ~S~~s~~itG 239 (257)
T d1fjha_ 230 MSPAASYVHG 239 (257)
T ss_dssp TSGGGTTCCS
T ss_pred hCchhCCccC
Confidence 9998887754
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.96 E-value=3.8e-29 Score=223.19 Aligned_cols=201 Identities=18% Similarity=0.145 Sum_probs=158.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcch---hhhHHHHhcCCCCeEEEEEec-------------cccCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENR---LQGSTIDEYNPINEVTLVSLN-------------NKESK 109 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~---l~~~~~~~~~~~~~~~~~~~d-------------~~~~g 109 (349)
++++|||||++|||+++|++|+++|+ +|++++|+..+ .++...++...+.++..+.|| ..+.+
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~ 88 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 88 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence 57999999999999999999999999 69999998544 344445555556788999999 34456
Q ss_pred CcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHH
Q 039397 110 AVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAAL 189 (349)
Q Consensus 110 ~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 189 (349)
++|.+|||+|.....++.+. +.++|++++++|+.|++++.+.+.+. ..++||++||+++..+.++++.|+++|+++
T Consensus 89 ~i~~vv~~ag~~~~~~~~~~-~~~~~~~~~~~~~~g~~~l~~~~~~~---~~~~iv~~SS~a~~~g~~~~~~YaAaka~l 164 (259)
T d2fr1a1 89 PLSAVFHAAATLDDGTVDTL-TGERIERASRAKVLGARNLHELTREL---DLTAFVLFSSFASAFGAPGLGGYAPGNAYL 164 (259)
T ss_dssp CEEEEEECCCCCCCCCGGGC-CHHHHHHHTHHHHHHHHHHHHHHTTS---CCSEEEEEEEHHHHTCCTTCTTTHHHHHHH
T ss_pred cccccccccccccccccccc-cHHHHHHHhhhhccchhHHHHHhhcc---CCceEeeecchhhccCCcccHHHHHHHHhH
Confidence 89999999999999988887 56899999999999999998876543 458999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCcccCC-CCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCce
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIGIE-MTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTY 263 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~ 263 (349)
++|++.++.+ .+++++|+||++.++ |...... ..........++|+++++.+..++..+...
T Consensus 165 ~~la~~~~~~---Gi~v~~I~pg~~~~~g~~~~~~~---------~~~~~~G~~~~~~~~~~~~l~~~l~~~~~~ 227 (259)
T d2fr1a1 165 DGLAQQRRSD---GLPATAVAWGTWAGSGMAEGPVA---------DRFRRHGVIEMPPETACRALQNALDRAEVC 227 (259)
T ss_dssp HHHHHHHHHT---TCCCEEEEECCBC---------------------CTTTTEECBCHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHhC---CCCEEECCCCcccCCccccchHH---------HHHHhcCCCCCCHHHHHHHHHHHHhCCCce
Confidence 9988877643 289999999988654 3322110 011112235678999999999999887654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.78 E-value=3.4e-20 Score=157.04 Aligned_cols=151 Identities=11% Similarity=0.089 Sum_probs=107.1
Q ss_pred ccCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCc
Q 039397 39 NFYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAV 111 (349)
Q Consensus 39 ~~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~i 111 (349)
..+..+++||+++||||+||||+++|++|+++|++|++++|+.+++++..+.+.... .+....+| .+..+++
T Consensus 15 ~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~i 93 (191)
T d1luaa1 15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAVKGA 93 (191)
T ss_dssp HHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHTTTC
T ss_pred HHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHhcCc
Confidence 345679999999999999999999999999999999999999999988877662211 11223333 3457899
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-CCCchhhHHHHHHHH
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-LPRMSLYASAKAALV 190 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-~~~~~~Y~asKaal~ 190 (349)
|+||||||+.. ... +.++|+..+++|+.+.++....+.+.+.........+++..+..+ ..+...|+++|+++.
T Consensus 94 Dilin~Ag~g~----~~~-~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~ 168 (191)
T d1luaa1 94 HFVFTAGAIGL----ELL-PQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIA 168 (191)
T ss_dssp SEEEECCCTTC----CCB-CHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHHHHHHHHHHHHHHHH
T ss_pred CeeeecCcccc----ccC-CHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccCcCcHHHHHHHHHHH
Confidence 99999999742 222 458899999999999888776665554332222223222222111 123457999999999
Q ss_pred HHHHH
Q 039397 191 TFYES 195 (349)
Q Consensus 191 ~l~~~ 195 (349)
.++++
T Consensus 169 ~l~~s 173 (191)
T d1luaa1 169 KLFES 173 (191)
T ss_dssp HHTSC
T ss_pred HHHhc
Confidence 88753
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=3.1e-17 Score=151.88 Aligned_cols=208 Identities=14% Similarity=0.025 Sum_probs=136.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc-----hhhhHHHHhcCCCCeEEEEEeccccC---------CCcce
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-----RLQGSTIDEYNPINEVTLVSLNNKES---------KAVDH 113 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~-----~l~~~~~~~~~~~~~~~~~~~d~~~~---------g~iDv 113 (349)
|+||||||||.||.+++++|.++|++|++++|... +++....+......++.++.+|.... -.+|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 89999999999999999999999999999999543 33333333223344678888884322 25699
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCCCchhh
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLPRMSLY 182 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~~~~~Y 182 (349)
++|+|+....... .++.+..+++|+.|+.++++++...-.+...++|++||.+.+- +..+...|
T Consensus 82 v~h~aa~~~~~~~-----~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y 156 (357)
T d1db3a_ 82 VYNLGAMSHVAVS-----FESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPY 156 (357)
T ss_dssp EEECCCCCTTTTT-----TSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHH
T ss_pred EEEeecccccchh-----hhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChH
Confidence 9999998754432 2445778999999999999998765444446899999876431 11235689
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccc-hhhhhH----------HHHhhhcCCCCHHHHHH
Q 039397 183 ASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDG-AEMQWK----------EEREVHVAGGPVEDFAR 251 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~~~~edvA~ 251 (349)
+.||.+.+.+++.++...+ +.++.+.|+.+-.|..........- ...... .........+.++|+|+
T Consensus 157 ~~sK~~~E~~~~~~~~~~~--l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~ 234 (357)
T d1db3a_ 157 AVAKLYAYWITVNYRESYG--MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK 234 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHC--CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC--CCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHH
Confidence 9999999999999987765 6788888877776643221100000 000000 00111224677899999
Q ss_pred HHHHHHhcCCc
Q 039397 252 LIVSGACRGDT 262 (349)
Q Consensus 252 ~i~~l~~~~~~ 262 (349)
+++.+++.+..
T Consensus 235 a~~~~~~~~~~ 245 (357)
T d1db3a_ 235 MQWMMLQQEQP 245 (357)
T ss_dssp HHHHTTSSSSC
T ss_pred HHHHHHhCCCC
Confidence 99999987643
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.74 E-value=3.5e-16 Score=143.74 Aligned_cols=203 Identities=14% Similarity=0.046 Sum_probs=138.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh--cCCCCeEEEEEecc-------ccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE--YNPINEVTLVSLNN-------KESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~~~~d~-------~~~g~iDvlVn 116 (349)
+||+||||||+|.||.+++++|.++|++|+++.|+.++...+.... .........+..|. +....+|+++|
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~ 89 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence 4899999999999999999999999999999999887665543322 23333445555663 33456899999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-C-------------------
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-L------------------- 176 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-~------------------- 176 (349)
+|+.... .......+++|+.|+.++++++... ++-.++|++||..+... .
T Consensus 90 ~a~~~~~--------~~~~~~~~~~nv~gt~~ll~~~~~~--~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~ 159 (342)
T d1y1pa1 90 IASVVSF--------SNKYDEVVTPAIGGTLNALRAAAAT--PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID 159 (342)
T ss_dssp CCCCCSC--------CSCHHHHHHHHHHHHHHHHHHHHTC--TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred hcccccc--------cccccccccchhhhHHHHHHhhhcc--cccccccccccceeeccCCCCCCCcccccccccccccc
Confidence 9886421 1234677889999999999988764 12368999999764321 1
Q ss_pred -----------CCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhH-----------
Q 039397 177 -----------PRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWK----------- 234 (349)
Q Consensus 177 -----------~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~----------- 234 (349)
.....|+.||.+.+.+++.++.+.+..+++.+++|+.+-.+........ .....+.
T Consensus 160 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~--~~~~~~~~~l~~g~~~~~ 237 (342)
T d1y1pa1 160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQS--GSTSGWMMSLFNGEVSPA 237 (342)
T ss_dssp HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCC--CHHHHHHHHHHTTCCCHH
T ss_pred ccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccc--cchHHHHHHHHcCCcCcc
Confidence 1234699999999999999998876667888888887765533211110 0000000
Q ss_pred HHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 235 EEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 235 ~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
.........+.++|+|++++.++..+
T Consensus 238 ~~~~~~~~~v~v~Dva~~~i~~l~~~ 263 (342)
T d1y1pa1 238 LALMPPQYYVSAVDIGLLHLGCLVLP 263 (342)
T ss_dssp HHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred cCCccceeeeeHHHHHHHHHHhhcCc
Confidence 00111123567899999999888764
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=3e-16 Score=142.39 Aligned_cols=203 Identities=13% Similarity=-0.010 Sum_probs=135.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcCCCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASLGHT 123 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~~~~ 123 (349)
.|+||||||+|.||++++++|.++|++|++++|.... .+... .. ...........| .....++|++||+|+....
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~-~~-~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~ 78 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-HW-IGHENFELINHDVVEPLYIEVDQIYHLASPASP 78 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-GG-TTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH-Hh-cCCCceEEEehHHHHHHHcCCCEEEECcccCCc
Confidence 3789999999999999999999999999999874322 22221 11 112234444444 2334579999999997643
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC----------------CCCchhhHHHHH
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP----------------LPRMSLYASAKA 187 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~----------------~~~~~~Y~asKa 187 (349)
.... ++..+.+++|+.|+.++++++.. .+-++|++||.+.+.. ......|+.||.
T Consensus 79 ~~~~-----~~~~~~~~~Nv~g~~~ll~~~~~----~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~ 149 (312)
T d2b69a1 79 PNYM-----YNPIKTLKTNTIGTLNMLGLAKR----VGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR 149 (312)
T ss_dssp HHHT-----TCHHHHHHHHHHHHHHHHHHHHH----HTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHH
T ss_pred hhHH-----hCHHHHHHHHHHHHHHHHHHHHH----cCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHH
Confidence 3221 33467899999999999998753 3347999999765521 123567999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhh-HHH--------HhhhcCCCCHHHHHHHHHHHHh
Q 039397 188 ALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQW-KEE--------REVHVAGGPVEDFARLIVSGAC 258 (349)
Q Consensus 188 al~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~edvA~~i~~l~~ 258 (349)
+.+.+++..+.+.+ +.+..+.|+.+-.|.........-...... ... .......+..+|++++++.++.
T Consensus 150 ~~E~~~~~~~~~~~--~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~ 227 (312)
T d2b69a1 150 VAETMCYAYMKQEG--VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN 227 (312)
T ss_dssp HHHHHHHHHHHHHC--CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC--CcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHh
Confidence 99999999988765 788888998887654322100000000000 000 0111245668999999999998
Q ss_pred cCCc
Q 039397 259 RGDT 262 (349)
Q Consensus 259 ~~~~ 262 (349)
.+..
T Consensus 228 ~~~~ 231 (312)
T d2b69a1 228 SNVS 231 (312)
T ss_dssp SSCC
T ss_pred hccC
Confidence 7644
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=6.3e-15 Score=135.03 Aligned_cols=207 Identities=11% Similarity=-0.002 Sum_probs=133.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-----hhhHHHHh-cCCCCeEEEEEecccc---------CCCcc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-----LQGSTIDE-YNPINEVTLVSLNNKE---------SKAVD 112 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-----l~~~~~~~-~~~~~~~~~~~~d~~~---------~g~iD 112 (349)
|+||||||+|.||.+++++|.++|++|+.++|.... ++....+. ......+.++.+|... ...+|
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 81 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcccc
Confidence 455999999999999999999999999999996542 22222222 2223467788888322 23567
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------CCCchh
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------LPRMSL 181 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~~~~~~ 181 (349)
+++|.|+........ +.....+++|+.|+.++++++..+-..+..++|++||.+.+-. ......
T Consensus 82 ~v~~~~a~~~~~~~~-----~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~ 156 (347)
T d1t2aa_ 82 EIYNLGAQSHVKISF-----DLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSP 156 (347)
T ss_dssp EEEECCSCCCHHHHH-----HSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSH
T ss_pred eeeeeeeccccchhh-----ccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCH
Confidence 888888765433222 3345678999999999999987765444468999998765421 123467
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHH------------HHhhhcCCCCHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKE------------EREVHVAGGPVEDF 249 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~edv 249 (349)
|+.||.+.+.+++.++.... +.+..+.|+.+..|........... ...... ........+.++|+
T Consensus 157 Yg~sK~~aE~~~~~~~~~~~--~~~~ilr~~~vyGp~~~~~~~~~~~-~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~ 233 (347)
T d1t2aa_ 157 YGAAKLYAYWIVVNFREAYN--LFAVNGILFNHESPRRGANFVTRKI-SRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 233 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEECTTSCTTSHHHHH-HHHHHHHHHTSCSCEEESCTTCEECCEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCEEEEEecceeCCCCCCCcccccc-ceeeehhhcCCcceeecCCCcceeeeeEecHH
Confidence 99999999999999887764 5667777766655432211100000 000000 00112346788999
Q ss_pred HHHHHHHHhcCCc
Q 039397 250 ARLIVSGACRGDT 262 (349)
Q Consensus 250 A~~i~~l~~~~~~ 262 (349)
++++..++..+..
T Consensus 234 ~~a~~~~~~~~~~ 246 (347)
T d1t2aa_ 234 VEAMWLMLQNDEP 246 (347)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHhhcCCC
Confidence 9999999987643
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=1.3e-14 Score=123.31 Aligned_cols=181 Identities=12% Similarity=0.090 Sum_probs=118.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeec
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNT 117 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnn 117 (349)
|..|+|+||||||+||++++++|+++|++|.++.|+.+++.... ...+.++.+| .+...+.|++|++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~------~~~~~~~~gD~~d~~~l~~al~~~d~vi~~ 74 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG------PRPAHVVVGDVLQAADVDKTVAGQDAVIVL 74 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS------CCCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc------ccccccccccccchhhHHHHhcCCCEEEEE
Confidence 45689999999999999999999999999999999988765321 2346677888 2345678999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCC----CchhhHHHHHHHHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLP----RMSLYASAKAALVTF 192 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~----~~~~Y~asKaal~~l 192 (349)
+|...... . . +++..+..++++++ ++.+ .++|++||.......+ ....|...|.+.+.+
T Consensus 75 ~g~~~~~~-----~-~------~~~~~~~~~l~~aa----~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~ 138 (205)
T d1hdoa_ 75 LGTRNDLS-----P-T------TVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKV 138 (205)
T ss_dssp CCCTTCCS-----C-C------CHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHH
T ss_pred eccCCchh-----h-h------hhhHHHHHHHHHHH----HhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHH
Confidence 98642211 1 1 23344555555554 3333 6899999876654332 234567777776655
Q ss_pred HHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 193 YESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 193 ~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
.+. ..+..+.+.||.+......+...... ........++.+|+|+.++.++++++
T Consensus 139 l~~------~~~~~tiirp~~~~~~~~~~~~~~~~--------~~~~~~~~i~~~DvA~~~~~~l~~~~ 193 (205)
T d1hdoa_ 139 LRE------SGLKYVAVMPPHIGDQPLTGAYTVTL--------DGRGPSRVISKHDLGHFMLRCLTTDE 193 (205)
T ss_dssp HHH------TCSEEEEECCSEEECCCCCSCCEEES--------SSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred HHh------cCCceEEEecceecCCCCcccEEEee--------CCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence 432 22888999998875432222111000 01112245788999999999997654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.58 E-value=3.9e-14 Score=130.63 Aligned_cols=201 Identities=13% Similarity=-0.012 Sum_probs=134.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeecCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNTAS 119 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnnAg 119 (349)
+.+||||||+|.||.+++++|.++|++|++++|........ .. ....+...| .+....+|++||.|+
T Consensus 15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~--~~----~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~ 88 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--DM----FCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 88 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG--GG----TCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh--hc----ccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence 44699999999999999999999999999998765432111 11 122344445 222357899999998
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------------------CCchh
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------------PRMSL 181 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------------~~~~~ 181 (349)
........ .+.....+.+|+.++.+++.++...- -.++|++||...+... .....
T Consensus 89 ~~~~~~~~----~~~~~~~~~~n~~gt~~ll~~~~~~~---vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~ 161 (363)
T d2c5aa1 89 DMGGMGFI----QSNHSVIMYNNTMISFNMIEAARING---IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDA 161 (363)
T ss_dssp CCCCHHHH----TTCHHHHHHHHHHHHHHHHHHHHHTT---CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSH
T ss_pred cccccccc----ccccccccccccchhhHHHHhHHhhC---ccccccccccccccccccccccccccccccCCcCCCCCH
Confidence 76443221 24457889999999999999987642 2489999997765321 12467
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHH-HH-----------hhhcCCCCHHHH
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKE-ER-----------EVHVAGGPVEDF 249 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~~edv 249 (349)
|+.||.+.+.+++.+..+.+ +.+..+.|+.+-.+.................. .. ......+..+|+
T Consensus 162 Yg~sK~~~E~~~~~~~~~~g--l~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~ 239 (363)
T d2c5aa1 162 FGLEKLATEELCKHYNKDFG--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDEC 239 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHH
Confidence 99999999999999987775 67888888777655332211111000000000 00 012346778999
Q ss_pred HHHHHHHHhcCCc
Q 039397 250 ARLIVSGACRGDT 262 (349)
Q Consensus 250 A~~i~~l~~~~~~ 262 (349)
++++..++.....
T Consensus 240 ~~~~~~~~~~~~~ 252 (363)
T d2c5aa1 240 VEGVLRLTKSDFR 252 (363)
T ss_dssp HHHHHHHHHSSCC
T ss_pred HHHHHHHHhCCCC
Confidence 9999999987643
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.57 E-value=1.9e-14 Score=131.31 Aligned_cols=209 Identities=14% Similarity=0.013 Sum_probs=134.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc-----hhhhHHHHh-cCCCCeEEEEEecccc---------CCCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN-----RLQGSTIDE-YNPINEVTLVSLNNKE---------SKAV 111 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~-----~l~~~~~~~-~~~~~~~~~~~~d~~~---------~g~i 111 (349)
.|+||||||||.||.+++++|.++|++|++++|... ++.....+. ......+.++.+|... ..++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 389999999999999999999999999999999543 222222222 1123456777787322 2367
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC--CeEEEEeccccccC----------CCCc
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN--GRVVVNASVENWLP----------LPRM 179 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--g~IV~isS~~~~~~----------~~~~ 179 (349)
|++||+|+........ ++....+++|+.|...+..++.....+.. .+++..||...... ....
T Consensus 81 D~Vih~Aa~~~~~~~~-----~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~ 155 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSF-----EIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPR 155 (339)
T ss_dssp SEEEECCSCCCHHHHH-----HSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCC
T ss_pred chhhhccccccccccc-----cCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCc
Confidence 9999999975433211 33467889999999999988865543322 34555555443221 2245
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHH-----------HhhhcCCCCHHH
Q 039397 180 SLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEE-----------REVHVAGGPVED 248 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ed 248 (349)
..|+.+|.+.+.++...+...+ +.+..+.|+.+-.|..........-........ .......+.++|
T Consensus 156 ~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D 233 (339)
T d1n7ha_ 156 SPYAASKCAAHWYTVNYREAYG--LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGD 233 (339)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHH
T ss_pred chhhHHHHHHHHHHHHHHHHhC--CCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeeh
Confidence 7899999999999999887765 788889987776664322110000000000000 001123567899
Q ss_pred HHHHHHHHHhcCCc
Q 039397 249 FARLIVSGACRGDT 262 (349)
Q Consensus 249 vA~~i~~l~~~~~~ 262 (349)
+|+++..++..+..
T Consensus 234 ~a~~~~~~~~~~~~ 247 (339)
T d1n7ha_ 234 YVEAMWLMLQQEKP 247 (339)
T ss_dssp HHHHHHHHHTSSSC
T ss_pred HHHHHHHHHhcCCC
Confidence 99999999998865
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.56 E-value=1e-14 Score=133.56 Aligned_cols=205 Identities=14% Similarity=-0.010 Sum_probs=135.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc----hhhhHHHHh-cCCCCeEEEEEecc-------ccCCCcce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN----RLQGSTIDE-YNPINEVTLVSLNN-------KESKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~----~l~~~~~~~-~~~~~~~~~~~~d~-------~~~g~iDv 113 (349)
+-|++|||||+|.||.+++++|.++|++|++++|... ......... ......+.++..|. ......|.
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~ 94 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 94 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence 4589999999999999999999999999999987332 111111111 11123567777773 23346788
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhh
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLY 182 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y 182 (349)
++|.++....... .++....+++|+.|+.++++++... +..++|++||.+.+... .....|
T Consensus 95 v~~~~a~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~~~~~~---~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y 166 (341)
T d1sb8a_ 95 VLHQAALGSVPRS-----INDPITSNATNIDGFLNMLIAARDA---KVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPY 166 (341)
T ss_dssp EEECCSCCCHHHH-----HHCHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH
T ss_pred ccccccccccccc-----ccCccchhheeehhHHHHHHHHHhc---CCceEEEcccceeeCCCCCCCccCCCCCCCCCcc
Confidence 8888776433221 2445789999999999999998754 22589999998765322 234789
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccch-hh--hhHH--------HHhhhcCCCCHHHHHH
Q 039397 183 ASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGA-EM--QWKE--------EREVHVAGGPVEDFAR 251 (349)
Q Consensus 183 ~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~-~~--~~~~--------~~~~~~~~~~~edvA~ 251 (349)
+.+|.+.+.+++.++...+ +++..+.|+.+-.+..........-- .. .... ........+.++|+|.
T Consensus 167 ~~sK~~~E~~~~~~~~~~~--i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~ 244 (341)
T d1sb8a_ 167 AVTKYVNELYADVFSRCYG--FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ 244 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHC--CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhC--CCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence 9999999999999987765 67778888766655332111000000 00 0000 0011234677899999
Q ss_pred HHHHHHhcC
Q 039397 252 LIVSGACRG 260 (349)
Q Consensus 252 ~i~~l~~~~ 260 (349)
++..++...
T Consensus 245 a~~~~~~~~ 253 (341)
T d1sb8a_ 245 ANLLAATAG 253 (341)
T ss_dssp HHHHHHTCC
T ss_pred hhhhhhhcc
Confidence 999988654
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.56 E-value=2.4e-14 Score=129.67 Aligned_cols=203 Identities=9% Similarity=-0.049 Sum_probs=131.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH-HHHhcCCCCeEEEEEeccccC---------CCcceeeec
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS-TIDEYNPINEVTLVSLNNKES---------KAVDHLVNT 117 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~-~~~~~~~~~~~~~~~~d~~~~---------g~iDvlVnn 117 (349)
|+||||||+|.||++++++|.++|++|+.++|........ ...+ ....++.++..|.... ...++++++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~ 79 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 79 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh-cccCCcEEEEccccChHHhhhhhccccccccccc
Confidence 7899999999999999999999999999999976442221 1122 2234678888884322 245677777
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCCCchhhHHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLPRMSLYASAK 186 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~~~~~Y~asK 186 (349)
|+....... .++....+++|+.|+.+++.++...- ...++++.||..-+. +......|+.+|
T Consensus 80 a~~~~~~~~-----~~~~~~~~~~n~~g~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK 152 (321)
T d1rpna_ 80 AAQSFVGAS-----WNQPVTTGVVDGLGVTHLLEAIRQFS--PETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAK 152 (321)
T ss_dssp CSCCCHHHH-----TTSHHHHHHHHTHHHHHHHHHHHHHC--TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred ccccccccc-----ccchHHHHhhhhhchHHHHHHHHHhC--CCcccccccchhhcCcccCCCCCCCCCccccChhHHHH
Confidence 765433221 13457889999999999999886542 123566666544321 122457899999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHH-------------HHhhhcCCCCHHHHHHHH
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKE-------------EREVHVAGGPVEDFARLI 253 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~edvA~~i 253 (349)
.+.+.+.+.++.+.. +.+..+.|+-+..|........ ..-..... ........+..+|+|+++
T Consensus 153 ~~~E~~~~~~~~~~~--~~~~~lr~~~vyGp~~~~~~~~--~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~ 228 (321)
T d1rpna_ 153 LYGHWITVNYRESFG--LHASSGILFNHESPLRGIEFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM 228 (321)
T ss_dssp HHHHHHHHHHHHHHC--CCEEEEEECCEECTTSCTTSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHhhcC--CcEEEEEEecccCCCccccccH--HHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHH
Confidence 999999999988765 5677777765555432211100 00000000 001112357789999999
Q ss_pred HHHHhcCCc
Q 039397 254 VSGACRGDT 262 (349)
Q Consensus 254 ~~l~~~~~~ 262 (349)
+.++..+..
T Consensus 229 ~~~~~~~~~ 237 (321)
T d1rpna_ 229 WLMLQQDKA 237 (321)
T ss_dssp HHHHHSSSC
T ss_pred HHHHhcCCc
Confidence 999987644
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.54 E-value=1.9e-14 Score=134.26 Aligned_cols=165 Identities=13% Similarity=0.015 Sum_probs=111.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc----------------hhhhHHHHh-cCCCCeEEEEEecccc--
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN----------------RLQGSTIDE-YNPINEVTLVSLNNKE-- 107 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~----------------~l~~~~~~~-~~~~~~~~~~~~d~~~-- 107 (349)
||+||||||+|.||.+++++|+++|++|+++|.-.. ...+..... .....++.++.+|...
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 789999999999999999999999999999972100 001111111 1112457788888321
Q ss_pred -------CCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----
Q 039397 108 -------SKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP----- 175 (349)
Q Consensus 108 -------~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~----- 175 (349)
.-++|+++|.|+......... +.+.....+++|+.|+.++++++...- ...++++.||...+..
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~--~~~~~~~~~~~Nv~gt~nll~~~~~~~--~~~~~i~~ss~~~~~~~~~~~ 156 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMI--DRSRAVYTQHNNVIGTLNVLFAIKEFG--EECHLVKLGTMGEYGTPNIDI 156 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTS--CHHHHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEECCGGGGCCCSSCB
T ss_pred HHHHHHHhhcchheeccccccccccccc--cccccccccccccccccHHHHHHHHhc--cccceeecccccccccccccc
Confidence 125799999998754332221 224456789999999999999887542 1235666666554321
Q ss_pred -------------------CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCC
Q 039397 176 -------------------LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE 217 (349)
Q Consensus 176 -------------------~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~ 217 (349)
......|+.||.+.+.+++.+..+.. +.+.++.|+.+-.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~--l~~~~lR~~~v~G~ 215 (393)
T d1i24a_ 157 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGV 215 (393)
T ss_dssp CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECEEECS
T ss_pred ccccccccccccccccccccccccHHHHHhhhhcccccccccccc--eeeeecccccccCC
Confidence 12235799999999999998887765 67777777666544
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=4.2e-14 Score=122.54 Aligned_cols=194 Identities=13% Similarity=0.053 Sum_probs=128.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCccee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHL 114 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvl 114 (349)
.|++|+||||||||.||.+++++|.++|. +|++++|++........ ..+....+| .+.....|++
T Consensus 11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~------~~i~~~~~D~~~~~~~~~~~~~~d~v 84 (232)
T d2bkaa1 11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY------KNVNQEVVDFEKLDDYASAFQGHDVG 84 (232)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG------GGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccc------ceeeeeeecccccccccccccccccc
Confidence 36789999999999999999999999995 89999998765443221 234444455 3334568999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYE 194 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~ 194 (349)
+|++|... .........++|+.++..+++++... +-.++|++||...... ....|+.+|...+...+
T Consensus 85 i~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~---~v~~fi~~Ss~~~~~~--~~~~Y~~~K~~~E~~l~ 151 (232)
T d2bkaa1 85 FCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKAG---GCKHFNLLSSKGADKS--SNFLYLQVKGEVEAKVE 151 (232)
T ss_dssp EECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHHT---TCCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHH
T ss_pred cccccccc--------cccchhhhhhhcccccceeeeccccc---CccccccCCccccccC--ccchhHHHHHHhhhccc
Confidence 99998641 11334567789999999999988542 2258999998876533 34679999998876553
Q ss_pred HHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhH--HHHhhhcCCCCHHHHHHHHHHHHhcCCc
Q 039397 195 SLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWK--EEREVHVAGGPVEDFARLIVSGACRGDT 262 (349)
Q Consensus 195 ~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~edvA~~i~~l~~~~~~ 262 (349)
. ++. -+++.+.||.+-.+......... -...... .........++++|+|++++.++.++..
T Consensus 152 ~----~~~-~~~~IlRP~~i~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~ 215 (232)
T d2bkaa1 152 E----LKF-DRYSVFRPGVLLCDRQESRPGEW-LVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD 215 (232)
T ss_dssp T----TCC-SEEEEEECCEEECTTGGGSHHHH-HHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred c----ccc-cceEEecCceeecCCCcCcHHHH-HHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc
Confidence 3 232 25778899998766432210000 0000000 0001122456789999999998877644
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.54 E-value=1.4e-14 Score=134.01 Aligned_cols=203 Identities=17% Similarity=0.056 Sum_probs=132.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEE-EecCcchhh-hHHHHhcCCCCeEEEEEeccccC---------CCcceeeec
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVL-VARRENRLQ-GSTIDEYNPINEVTLVSLNNKES---------KAVDHLVNT 117 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~-~~r~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~---------g~iDvlVnn 117 (349)
+||||||+|.||.+++++|+++|++|++ +++...... .....+ .....+.++.+|.... ..+|++||+
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 5899999999999999999999998655 443322111 111122 2234678888883221 268999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc------CCCeEEEEeccccccC----------------
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE------SNGRVVVNASVENWLP---------------- 175 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~------~~g~IV~isS~~~~~~---------------- 175 (349)
|+........ ++....+++|+.|+.++.+++.....+ ...++|++||.+.+-.
T Consensus 81 Aa~~~~~~~~-----~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~ 155 (361)
T d1kewa_ 81 AAESHVDRSI-----TGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLF 155 (361)
T ss_dssp CSCCCHHHHH-----HCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCB
T ss_pred ccccchhhHH-----hCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCc
Confidence 9875432222 223578999999999999998776432 2268999999875521
Q ss_pred -----CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhh-hHHHH--------hhhc
Q 039397 176 -----LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQ-WKEER--------EVHV 241 (349)
Q Consensus 176 -----~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~--------~~~~ 241 (349)
......|+.||.+.+.+++..+...+ +.+.++.|+.+-.|....... -..... ..... ....
T Consensus 156 ~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~--i~~~~lR~~~vyGp~~~~~~~--i~~~i~~~~~g~~~~v~g~g~~~r 231 (361)
T d1kewa_ 156 TETTAYAPSSPYSASKASSDHLVRAWRRTYG--LPTIVTNCSNNYGPYHFPEKL--IPLVILNALEGKPLPIYGKGDQIR 231 (361)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECEEESTTCCTTSH--HHHHHHHHHHTCCEEEETTSCCEE
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CCEEEEecCceECcCCCcCcH--HHHHHHHHHcCCCcEEeCCCCeEE
Confidence 11245699999999999999987774 778888887776654321000 000000 00000 0112
Q ss_pred CCCCHHHHHHHHHHHHhcCC
Q 039397 242 AGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 242 ~~~~~edvA~~i~~l~~~~~ 261 (349)
..+..+|+|+++..++..+.
T Consensus 232 ~~i~v~D~a~ai~~~~~~~~ 251 (361)
T d1kewa_ 232 DWLYVEDHARALHMVVTEGK 251 (361)
T ss_dssp EEEEHHHHHHHHHHHHHHCC
T ss_pred eCEEHHHHHHHHHHHHhcCC
Confidence 34678999999999998763
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.53 E-value=4.1e-14 Score=129.79 Aligned_cols=158 Identities=16% Similarity=0.110 Sum_probs=111.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHH--HHhcCCCCeEEEEEecccc---------CCCcceee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGST--IDEYNPINEVTLVSLNNKE---------SKAVDHLV 115 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~--~~~~~~~~~~~~~~~d~~~---------~g~iDvlV 115 (349)
|+||||||+|.||.+++++|+++|++|+++++.... ..... .... ...+.++.+|... .-++|++|
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 789999999999999999999999999999864322 11111 1222 2346667777321 12689999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC---------------CCCch
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP---------------LPRMS 180 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~---------------~~~~~ 180 (349)
|+|+........ +.-.....+|+.|+.++++++...- -.++|++||...+.. .....
T Consensus 80 hlAa~~~~~~~~-----~~~~~~~~~N~~~t~~ll~~~~~~~---i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~ 151 (347)
T d1z45a2 80 HFAGLKAVGEST-----QIPLRYYHNNILGTVVLLELMQQYN---VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTN 151 (347)
T ss_dssp ECCSCCCHHHHH-----HSHHHHHHHHHHHHHHHHHHHHHHT---CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCS
T ss_pred Eccccccccccc-----cCcccccccchhhhHHHHHHHHhcc---cceEEeecceeeecCcccCCCCCccccccCCCCCC
Confidence 999976433222 2336788899999999999986542 248999999776521 12346
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCccc
Q 039397 181 LYASAKAALVTFYESLRFELNDEVGITIATHGWIG 215 (349)
Q Consensus 181 ~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~ 215 (349)
.|+.||.+.+.+++.+..+....+.+..+.|+.+-
T Consensus 152 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~ 186 (347)
T d1z45a2 152 PYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPI 186 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEE
T ss_pred hhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceE
Confidence 79999999999999988765444667777665443
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.51 E-value=6.8e-14 Score=127.87 Aligned_cols=196 Identities=10% Similarity=-0.002 Sum_probs=134.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc--------cCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK--------ESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~--------~~g~iDvlVnnAg 119 (349)
+||||||+|.||.+++++|+++| ++|+++++..+....... ...+.++.+|.. ...++|++||+|+
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~-----~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~ 76 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-----HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA 76 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT-----CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc-----CCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence 59999999999999999999999 589999887655443321 246788888732 2235899999999
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------------------CCchh
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------------PRMSL 181 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------------~~~~~ 181 (349)
........ ++....+++|+.|+.++++++.. .+-+.+++||...+... .....
T Consensus 77 ~~~~~~~~-----~~~~~~~~~nv~gt~~ll~~~~~----~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 147 (342)
T d2blla1 77 IATPIEYT-----RNPLRVFELDFEENLRIIRYCVK----YRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI 147 (342)
T ss_dssp CCCHHHHH-----HSHHHHHHHHTHHHHHHHHHHHH----TTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGH
T ss_pred cccccccc-----cCCcccccccccccccccccccc----ccccccccccccccccccccccccccccccccccCCCcch
Confidence 76543221 23357899999999999999854 34466777776654321 12367
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccch---hhhhHH------------HHhhhcCCCCH
Q 039397 182 YASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGA---EMQWKE------------EREVHVAGGPV 246 (349)
Q Consensus 182 Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~---~~~~~~------------~~~~~~~~~~~ 246 (349)
|+.||.+.+.+++..+...+ +.++.+.|..+-.+............ ...+.. ........+..
T Consensus 148 Y~~sK~~~E~~~~~~~~~~~--~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v 225 (342)
T d2blla1 148 YSVSKQLLDRVIWAYGEKEG--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 225 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEH
T ss_pred hhhcccchhhhhhhhhcccC--ceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccc
Confidence 99999999999999988765 67888888777665433322111110 000000 00112236788
Q ss_pred HHHHHHHHHHHhcC
Q 039397 247 EDFARLIVSGACRG 260 (349)
Q Consensus 247 edvA~~i~~l~~~~ 260 (349)
+|+|+++..+++.+
T Consensus 226 ~D~~~a~~~~~~~~ 239 (342)
T d2blla1 226 RDGIEALYRIIENA 239 (342)
T ss_dssp HHHHHHHHHHHHCG
T ss_pred ccccceeeeehhhc
Confidence 99999999999874
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.51 E-value=1.2e-13 Score=125.37 Aligned_cols=204 Identities=15% Similarity=0.070 Sum_probs=133.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEE------ecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLV------ARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLV 115 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~------~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlV 115 (349)
+||||||+|.||.+++++|+++|++|..+ ++..................+.++..| .......|+++
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi 81 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIV 81 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceEE
Confidence 58999999999999999999999865443 322111111101111223467788887 23356789999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYAS 184 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~a 184 (349)
|.|+........ +.....+++|+.|+.++++++... +..++|++||.+.+.+. .....|+.
T Consensus 82 ~~a~~~~~~~~~-----~~~~~~~~~N~~gt~~ll~~~~~~---~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~ 153 (322)
T d1r6da_ 82 HFAAESHVDRSI-----AGASVFTETNVQGTQTLLQCAVDA---GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAA 153 (322)
T ss_dssp ECCSCCCHHHHH-----HCCHHHHHHHTHHHHHHHHHHHHT---TCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHH
T ss_pred eecccccccccc-----cchHHHhhhhHHHHHHHHHHHHHc---CCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHH
Confidence 999875443322 234677899999999999998653 23589999998765432 23468999
Q ss_pred HHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCcccc-------ccchhhhhHHHHhhhcCCCCHHHHHHHHHHHH
Q 039397 185 AKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFML-------EDGAEMQWKEEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 185 sKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
+|.+.+.+++.++.+.. +.+..+.|+.+-.|........ ..+...............+..+|+|+++..++
T Consensus 154 sK~~~E~~~~~~~~~~~--~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~ 231 (322)
T d1r6da_ 154 SKAGSDLVARAYHRTYG--LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVL 231 (322)
T ss_dssp HHHHHHHHHHHHHHHHC--CCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC--CCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHH
Confidence 99999999999988765 7888888887766532211000 00000000000111223567899999999999
Q ss_pred hcCCc
Q 039397 258 CRGDT 262 (349)
Q Consensus 258 ~~~~~ 262 (349)
.++..
T Consensus 232 ~~~~~ 236 (322)
T d1r6da_ 232 AGGRA 236 (322)
T ss_dssp HHCCT
T ss_pred hCCCC
Confidence 98753
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.51 E-value=4.5e-14 Score=129.51 Aligned_cols=203 Identities=17% Similarity=0.035 Sum_probs=132.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch---hhhHHHHhcCCCCeEEEEEeccc-------cCCCcceeee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR---LQGSTIDEYNPINEVTLVSLNNK-------ESKAVDHLVN 116 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~---l~~~~~~~~~~~~~~~~~~~d~~-------~~g~iDvlVn 116 (349)
.|.||||||||.||.+++++|.++|++|.+++++.-. ........ ....+.++.+|.. .....|.++|
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~ 79 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKADAIVH 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhhhhhhh
Confidence 3689999999999999999999999987666654211 11111111 2346788888832 2346788999
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC--------------------
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-------------------- 176 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-------------------- 176 (349)
.|+......... +....+++|+.|+.+++.++... +.++|++||...+...
T Consensus 80 ~a~~~~~~~~~~-----~~~~~~~~N~~g~~nll~~~~~~----~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~ 150 (346)
T d1oc2a_ 80 YAAESHNDNSLN-----DPSPFIHTNFIGTYTLLEAARKY----DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE 150 (346)
T ss_dssp CCSCCCHHHHHH-----CCHHHHHHHTHHHHHHHHHHHHH----TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT
T ss_pred hhhcccccchhh-----CcccceeeehHhHHhhhhhhccc----cccccccccceEecccCccccccccccCcccccccC
Confidence 988765433222 23578899999999999887543 3468888777654211
Q ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccc-------cchhhhhHHHHhhhcCCCCH
Q 039397 177 ---PRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLE-------DGAEMQWKEEREVHVAGGPV 246 (349)
Q Consensus 177 ---~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 246 (349)
...+.|+.+|.+.+.+++....+.. +++.++.|+.+-.|......... .+...............+..
T Consensus 151 ~~~~p~s~Y~~sK~~~E~~~~~~~~~~~--i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v 228 (346)
T d1oc2a_ 151 TNYNPSSPYSSTKAASDLIVKAWVRSFG--VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT 228 (346)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcC--CCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccch
Confidence 1236799999999999999887764 78899999877665321100000 00000000011122346678
Q ss_pred HHHHHHHHHHHhcCCc
Q 039397 247 EDFARLIVSGACRGDT 262 (349)
Q Consensus 247 edvA~~i~~l~~~~~~ 262 (349)
+|+|++++.++.++..
T Consensus 229 ~D~a~a~~~~~~~~~~ 244 (346)
T d1oc2a_ 229 NDHSTGVWAILTKGRM 244 (346)
T ss_dssp HHHHHHHHHHHHHCCT
T ss_pred hhHHHHHHHHHhhccc
Confidence 9999999999887644
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=8.3e-14 Score=127.32 Aligned_cols=161 Identities=14% Similarity=0.032 Sum_probs=114.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEecccc---------CCCcceeeecC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNNKE---------SKAVDHLVNTA 118 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~~~---------~g~iDvlVnnA 118 (349)
+||||||+|.||.+++++|+++|++|++++|-........... ......+.++++|... ..++|++||+|
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA 81 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence 4999999999999999999999999999987433322211111 1112367788888221 23689999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------------CCchhhHHHH
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------PRMSLYASAK 186 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------~~~~~Y~asK 186 (349)
+....... .++....+++|+.|+.++++++...- -.++|++||.+.+.+. .....|+.+|
T Consensus 82 a~~~~~~~-----~~~~~~~~~~Nv~gt~nlL~~~~~~~---v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK 153 (338)
T d1udca_ 82 GLKAVGES-----VQKPLEYYDNNVNGTLRLISAMRAAN---VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSK 153 (338)
T ss_dssp SCCCHHHH-----HHCHHHHHHHHHHHHHHHHHHHHHHT---CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHH
T ss_pred CccchhhH-----HhCHHHHHHhHHHHHHHHHHHHHHhC---CCEEEecCcceEEccccccccccccccCCCcchHHHHH
Confidence 96532211 13346889999999999999987542 2479999987765322 2356799999
Q ss_pred HHHHHHHHHHHHHhcCCeeEEEEecCcccCCC
Q 039397 187 AALVTFYESLRFELNDEVGITIATHGWIGIEM 218 (349)
Q Consensus 187 aal~~l~~~la~el~~~I~v~~v~PG~v~T~~ 218 (349)
.+.+.+.+....+... +.+..+.|+.+-.+.
T Consensus 154 ~~~e~~~~~~~~~~~~-~~~~ilR~~~v~G~~ 184 (338)
T d1udca_ 154 LMVEQILTDLQKAQPD-WSIALLRYFNPVGAH 184 (338)
T ss_dssp HHHHHHHHHHHHHSTT-CEEEEEEECEEECCC
T ss_pred hhhhHHHHHHHhhccC-CeEEEEeeccEEecc
Confidence 9999999987776533 577777777665543
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=2.9e-13 Score=122.11 Aligned_cols=193 Identities=15% Similarity=0.026 Sum_probs=124.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch-hhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR-LQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFF 125 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~-l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~ 125 (349)
.|+||||||+|.||.+++++|+++|+.|+++++..+. +... ..+. +.-....+|.++|+|+......
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~~~~~~~-~~~~-----------~~~~~~~~d~v~~~a~~~~~~~ 69 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDS-RAVH-----------DFFASERIDQVYLAAAKVGGIV 69 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCH-HHHH-----------HHHHHHCCSEEEECCCCCCCHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchhccccCH-HHHH-----------HHHhhcCCCEEEEcchhccccc
Confidence 4789999999999999999999999999887654321 1000 0000 0011235799999987653222
Q ss_pred ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC----------------CCchhhHHHHHHH
Q 039397 126 FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL----------------PRMSLYASAKAAL 189 (349)
Q Consensus 126 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~----------------~~~~~Y~asKaal 189 (349)
.. .....+.+++|+.|+.++++++..+ +-.++|++||.+.+.+. +...+|+.||.+.
T Consensus 70 ~~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~ 142 (315)
T d1e6ua_ 70 AN----NTYPADFIYQNMMIESNIIHAAHQN---DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAG 142 (315)
T ss_dssp HH----HHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHH
T ss_pred cc----hhhHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHH
Confidence 11 1234567889999999999988654 22479999998876421 1235799999999
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccc-hhhhh--HHHH-------------hhhcCCCCHHHHHHHH
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDG-AEMQW--KEER-------------EVHVAGGPVEDFARLI 253 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~--~~~~-------------~~~~~~~~~edvA~~i 253 (349)
+.+++.+..+.+ +.+..+.|+.+-.|..........- ..... .... .........+|+++++
T Consensus 143 E~~~~~~~~~~g--l~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~ 220 (315)
T d1e6ua_ 143 IKLCESYNRQYG--RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAAS 220 (315)
T ss_dssp HHHHHHHHHHHC--CEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHH
T ss_pred HHHHHHHHHHhC--CCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHH
Confidence 999999988775 6888889877766543211110000 00000 0000 1123456779999999
Q ss_pred HHHHhcC
Q 039397 254 VSGACRG 260 (349)
Q Consensus 254 ~~l~~~~ 260 (349)
..++...
T Consensus 221 ~~~~~~~ 227 (315)
T d1e6ua_ 221 IHVMELA 227 (315)
T ss_dssp HHHHHSC
T ss_pred HHhhhhc
Confidence 9988554
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.45 E-value=8.7e-13 Score=119.56 Aligned_cols=146 Identities=12% Similarity=0.024 Sum_probs=101.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhh-hHHHHhcCCCCeEEEEEecccc---------CCCcceeeecC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ-GSTIDEYNPINEVTLVSLNNKE---------SKAVDHLVNTA 118 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~-~~~~~~~~~~~~~~~~~~d~~~---------~g~iDvlVnnA 118 (349)
+||||||+|.||.+++++|.++|++|+++++-..... .....+. ...++.++.+|... ..++|++||+|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a 80 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 80 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence 5899999999999999999999999999875322211 1111222 22467788888322 12579999999
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC----------------------
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL---------------------- 176 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~---------------------- 176 (349)
+....... .++....+++|+.|+.++++++... ...+.|+.||..+..+.
T Consensus 81 a~~~~~~~-----~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (338)
T d1orra_ 81 GQVAMTTS-----IDNPCMDFEINVGGTLNLLEAVRQY---NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGY 152 (338)
T ss_dssp CCCCHHHH-----HHCHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCB
T ss_pred cccccccc-----ccChHHHHHHHHHHHHHHHHhhhcc---cccccccccccccccccccccccccccccccccccccCc
Confidence 87643221 1234788999999999999988654 22455666655443221
Q ss_pred ------CCchhhHHHHHHHHHHHHHHHHHhcCC
Q 039397 177 ------PRMSLYASAKAALVTFYESLRFELNDE 203 (349)
Q Consensus 177 ------~~~~~Y~asKaal~~l~~~la~el~~~ 203 (349)
.....|+.+|...+.+.......+...
T Consensus 153 ~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~ 185 (338)
T d1orra_ 153 DESTQLDFHSPYGCSKGAADQYMLDYARIFGLN 185 (338)
T ss_dssp CTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred ccCCccccccccccccchhhhhhhhhhhccCcc
Confidence 135789999999999999988887654
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=4.8e-12 Score=115.53 Aligned_cols=160 Identities=12% Similarity=-0.016 Sum_probs=109.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc------chhhhHHHHh-cCCCCeEEEEEeccc---------cCCCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRE------NRLQGSTIDE-YNPINEVTLVSLNNK---------ESKAV 111 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~------~~l~~~~~~~-~~~~~~~~~~~~d~~---------~~g~i 111 (349)
|+||||||+|.||.+++++|+++|++|+++++.. .........+ ......+.++.+|.. ....+
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 82 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence 7899999999999999999999999999997521 1111111111 112346778888832 22467
Q ss_pred ceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC------------CCc
Q 039397 112 DHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL------------PRM 179 (349)
Q Consensus 112 DvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~------------~~~ 179 (349)
|+++|.|+........ ++....+++|+.|+.++++++... +-.+++++||...+... ...
T Consensus 83 ~~i~h~Aa~~~~~~~~-----~~p~~~~~~Nv~gt~~l~~~~~~~---~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~ 154 (346)
T d1ek6a_ 83 MAVIHFAGLKAVGESV-----QKPLDYYRVNLTGTIQLLEIMKAH---GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCT 154 (346)
T ss_dssp EEEEECCSCCCHHHHH-----HCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred ccccccccccCcHhhH-----hCHHHHHHhhhcccccccchhhhc---CcccccccccceeeeccccccccccccccccC
Confidence 8899999976432211 234678899999999999988643 22479998887655321 234
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccC
Q 039397 180 SLYASAKAALVTFYESLRFELNDEVGITIATHGWIGI 216 (349)
Q Consensus 180 ~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T 216 (349)
..|+.+|...+...+.++..... +....+.|+.+-.
T Consensus 155 ~~Y~~~k~~~e~~~~~~~~~~~~-~~~~~lR~~~v~G 190 (346)
T d1ek6a_ 155 NPYGKSKFFIEEMIRDLCQADKT-WNAVLLRYFNPTG 190 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCTT-CEEEEEEECEEEC
T ss_pred ChHHHHHHHHHHHHHHHHHhccC-CceEEEeecceec
Confidence 57999999999998887654322 5666666654443
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.37 E-value=1.3e-12 Score=112.15 Aligned_cols=197 Identities=14% Similarity=0.017 Sum_probs=119.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCe--EEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKAN--LVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~--Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnnA 118 (349)
++||||||+|+||++++++|+++|++ |+...|++++.+... ..+..+.+| .+....+|.+||+|
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a 76 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG-------GEADVFIGDITDADSINPAFQGIDALVILT 76 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT-------CCTTEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc-------CCcEEEEeeeccccccccccccceeeEEEE
Confidence 69999999999999999999999975 555667765543221 234455666 23345789999999
Q ss_pred cCCCCccccc--------cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHH-HH
Q 039397 119 SLGHTFFFEE--------VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKA-AL 189 (349)
Q Consensus 119 g~~~~~~~~~--------~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKa-al 189 (349)
+......... ............+|+.++.++....... ..+.....++.....+......|..++. ..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 153 (252)
T d2q46a1 77 SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---GVKHIVVVGSMGGTNPDHPLNKLGNGNILVW 153 (252)
T ss_dssp CCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---TCSEEEEEEETTTTCTTCGGGGGGGCCHHHH
T ss_pred eeccccccccchhhhhhcccccccchhhhccccccceeeccccccc---cccccccccccccCCCCcccccccccchhhh
Confidence 8754321111 0012345667788999988888776543 3367888887776655443333322222 22
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
....+.+..+.+ +.++.++||.+-.+........... . ..........++++|+|++++.++.++
T Consensus 154 ~~~~~~~~~~~~--~~~~ilRp~~v~g~~~~~~~~~~~~-~---~~~~~~~~~~i~~~Dva~a~~~~l~~~ 218 (252)
T d2q46a1 154 KRKAEQYLADSG--TPYTIIRAGGLLDKEGGVRELLVGK-D---DELLQTDTKTVPRADVAEVCIQALLFE 218 (252)
T ss_dssp HHHHHHHHHHSS--SCEEEEEECEEECSCTTSSCEEEES-T---TGGGGSSCCEEEHHHHHHHHHHHTTCG
T ss_pred hhhhhhhhhccc--ccceeecceEEECCCcchhhhhhcc-C---cccccCCCCeEEHHHHHHHHHHHhCCc
Confidence 222233333322 7889999998866643321111110 0 011122235678899999999999764
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.37 E-value=3e-12 Score=117.15 Aligned_cols=206 Identities=11% Similarity=-0.067 Sum_probs=133.6
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc---------CCCcceee
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE---------SKAVDHLV 115 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~---------~g~iDvlV 115 (349)
++||+||||||+|.||.+++++|.++|++|++++|+..+......... ....+..+.+|... ...+|+++
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~ 84 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREFQPEIVF 84 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence 478999999999999999999999999999999999877665544332 23357788888422 23679999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC------------CCCchhhH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP------------LPRMSLYA 183 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~------------~~~~~~Y~ 183 (349)
|.|+....... .+..+..+++|+.|+.++++++...- ....++..||...... ......|+
T Consensus 85 ~~aa~~~~~~~-----~~~~~~~~~~Nv~g~~n~l~~~~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~ 157 (356)
T d1rkxa_ 85 HMAAQPLVRLS-----YSEPVETYSTNVMGTVYLLEAIRHVG--GVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYS 157 (356)
T ss_dssp ECCSCCCHHHH-----HHCHHHHHHHHTHHHHHHHHHHHHHC--CCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHH
T ss_pred hhhcccccccc-----ccCCccccccccccchhhhhhhhccc--cccccccccccccccccccccccccccccCCCCccc
Confidence 99986533221 13346789999999999999886531 2234444444333221 12346799
Q ss_pred HHHHHHHHHHHHHHHHhcCC-------eeEEEEecCcccCCCCCCccccccchhhhhHH--------HHhhhcCCCCHHH
Q 039397 184 SAKAALVTFYESLRFELNDE-------VGITIATHGWIGIEMTKGKFMLEDGAEMQWKE--------EREVHVAGGPVED 248 (349)
Q Consensus 184 asKaal~~l~~~la~el~~~-------I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ed 248 (349)
.+|.+.+.+.+..+.++... +.+..+.|+-+..+-.......... ...... ...........+|
T Consensus 158 ~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~v~D 236 (356)
T d1rkxa_ 158 NSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPD-ILRAFEQSQPVIIRNPHAIRPWQHVLE 236 (356)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHH-HHHHHHTTCCEECSCTTCEECCEETHH
T ss_pred cccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHH-HHHHHhCCCceEEeecccccccccccc
Confidence 99999999999988876431 5777888876654421110000000 000000 0011123455799
Q ss_pred HHHHHHHHHhc
Q 039397 249 FARLIVSGACR 259 (349)
Q Consensus 249 vA~~i~~l~~~ 259 (349)
+|.++..++..
T Consensus 237 ~~~a~~~~~~~ 247 (356)
T d1rkxa_ 237 PLSGYLLLAQK 247 (356)
T ss_dssp HHHHHHHHHHH
T ss_pred ccchhhhhhhh
Confidence 99998888775
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.36 E-value=1.6e-11 Score=113.66 Aligned_cols=159 Identities=11% Similarity=-0.034 Sum_probs=109.8
Q ss_pred EEEEeCCCchHHHHHHHHHHH-cCCeEEEEecC---------cchhhhHHHHh--------cCCCCeEEEEEecc-----
Q 039397 49 VVIITGASSDIGEQIAYEYAK-RKANLVLVARR---------ENRLQGSTIDE--------YNPINEVTLVSLNN----- 105 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~-~G~~Vv~~~r~---------~~~l~~~~~~~--------~~~~~~~~~~~~d~----- 105 (349)
+||||||+|.||.+++++|++ .|++|+++|+- .+..+.....+ ........++.+|.
T Consensus 4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~ 83 (383)
T d1gy8a_ 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF 83 (383)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHH
Confidence 699999999999999999986 69999999841 11111111111 11223466777772
Q ss_pred -----ccCCCcceeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----
Q 039397 106 -----KESKAVDHLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP----- 175 (349)
Q Consensus 106 -----~~~g~iDvlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~----- 175 (349)
+...++|+++|.|+........ +.....+++|+.++..+++++...- ..++++++|...+..
T Consensus 84 l~~~~~~~~~~d~ViH~Aa~~~~~~~~-----~~~~~~~~~N~~~t~~~l~~~~~~~---~~~~~~~~s~~~~~~~~~~~ 155 (383)
T d1gy8a_ 84 LNGVFTRHGPIDAVVHMCAFLAVGESV-----RDPLKYYDNNVVGILRLLQAMLLHK---CDKIIFSSSAAIFGNPTMGS 155 (383)
T ss_dssp HHHHHHHSCCCCEEEECCCCCCHHHHH-----HCHHHHHHHHHHHHHHHHHHHHHTT---CCEEEEEEEGGGTBSCCC--
T ss_pred hhhhhhccceeehhhcccccccccccc-----cccccccccccccccccchhhhccC---Cccccccccccccccccccc
Confidence 3446789999999976543222 3346788999999999999887542 246777766654421
Q ss_pred -------------CCCchhhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcccCC
Q 039397 176 -------------LPRMSLYASAKAALVTFYESLRFELNDEVGITIATHGWIGIE 217 (349)
Q Consensus 176 -------------~~~~~~Y~asKaal~~l~~~la~el~~~I~v~~v~PG~v~T~ 217 (349)
......|+.+|.+.+.+++.+...++ +.+.++.|+.+-.+
T Consensus 156 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g--l~~~~lR~~~vyG~ 208 (383)
T d1gy8a_ 156 VSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG--IKGICLRYFNACGA 208 (383)
T ss_dssp ---CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECEEECC
T ss_pred ccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhC--CCEEEEecceeecc
Confidence 12357799999999999999987665 67777777655444
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.36 E-value=8.6e-12 Score=105.92 Aligned_cols=190 Identities=14% Similarity=0.009 Sum_probs=120.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----cccCCCcceeeecCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----NKESKAVDHLVNTAS 119 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----~~~~g~iDvlVnnAg 119 (349)
.|+||||||||.||++++++|.++|+ +|+...|+...... .......| ....+.+|.+|+++|
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~----------~~~~~~~d~~~~~~~~~~~~d~vi~~~g 71 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP----------RLDNPVGPLAELLPQLDGSIDTAFCCLG 71 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCT----------TEECCBSCHHHHGGGCCSCCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcc----------cccccccchhhhhhccccchheeeeeee
Confidence 48999999999999999999999998 66666765432111 11111111 334567899999998
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHH
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFE 199 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e 199 (349)
..... ...-+...++|+.++..+++++... +-.+++++||..+.. .....|..+|...+...+.
T Consensus 72 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~---~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E~~l~~---- 135 (212)
T d2a35a1 72 TTIKE-------AGSEEAFRAVDFDLPLAVGKRALEM---GARHYLVVSALGADA--KSSIFYNRVKGELEQALQE---- 135 (212)
T ss_dssp CCHHH-------HSSHHHHHHHHTHHHHHHHHHHHHT---TCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHTT----
T ss_pred eeccc-------cccccccccchhhhhhhcccccccc---ccccccccccccccc--ccccchhHHHHHHhhhccc----
Confidence 64221 1223577889999999999987542 226899999877653 3456799999887765532
Q ss_pred hcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCCceEE
Q 039397 200 LNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGDTYVK 265 (349)
Q Consensus 200 l~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~~~i~ 265 (349)
+.. -+.+.+.|+.+..+.........-.... ..........+..+|+|++++.++.++...+.
T Consensus 136 ~~~-~~~~I~Rp~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~DvA~ai~~~~~~~~~g~~ 198 (212)
T d2a35a1 136 QGW-PQLTIARPSLLFGPREEFRLAEILAAPI--ARILPGKYHGIEACDLARALWRLALEEGKGVR 198 (212)
T ss_dssp SCC-SEEEEEECCSEESTTSCEEGGGGTTCCC--C----CHHHHHHHHHHHHHHHHHHTCCCSEEE
T ss_pred ccc-ccceeeCCcceeCCcccccHHHHHHHHH--hhccCCCCcEEEHHHHHHHHHHHHcCCCCCCE
Confidence 221 2578889998866543211000000000 00000011235679999999999998876543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.05 E-value=1.3e-13 Score=115.55 Aligned_cols=168 Identities=10% Similarity=0.093 Sum_probs=93.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--------------cccCCCccee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--------------NKESKAVDHL 114 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--------------~~~~g~iDvl 114 (349)
++.|+||+|+||+++|+.|+++|++|++.+|++++++++.+++............| ......+|.+
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA 81 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence 46777888999999999999999999999999999988877763211111122222 1111223443
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCC-CeEEEEeccccccCCCCchhhHHHHHHHHHHH
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESN-GRVVVNASVENWLPLPRMSLYASAKAALVTFY 193 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~ 193 (349)
.++............+ ...+......+..+...+.+.....+.... ...+++.|............|..++++....+
T Consensus 82 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~a 160 (212)
T d1jaya_ 82 RDLKNILREKIVVSPL-VPVSRGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDES 160 (212)
T ss_dssp HHTHHHHTTSEEEECC-CCEECCTTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTCCCCEEEEEEESCHHH
T ss_pred HHhhhhhccccccccc-cccccccccccccccchhhhhhhhhhhhhcccccceeecHHHhcCcccccCccceEEeCCHHH
Confidence 3333322222111111 112222223333333333333333332222 23333344444444445556777777777777
Q ss_pred HHHHHHhcCC-eeEEEEecCcccCC
Q 039397 194 ESLRFELNDE-VGITIATHGWIGIE 217 (349)
Q Consensus 194 ~~la~el~~~-I~v~~v~PG~v~T~ 217 (349)
+..+.++..+ ++++.+.||.+++.
T Consensus 161 ~~~~~~~~~~~~g~~~~~~G~l~~a 185 (212)
T d1jaya_ 161 KKVVMSLISEIDGLRPLDAGPLSNS 185 (212)
T ss_dssp HHHHHHHHHHSTTEEEEEEESGGGH
T ss_pred HHHHHHHHhhCCCeEEEEeChHHHH
Confidence 7777776655 88999999988753
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.04 E-value=2e-10 Score=101.55 Aligned_cols=189 Identities=11% Similarity=-0.011 Sum_probs=103.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH--HHh-cCCCCeEEEEEec-------cccCCCcceeee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST--IDE-YNPINEVTLVSLN-------NKESKAVDHLVN 116 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~--~~~-~~~~~~~~~~~~d-------~~~~g~iDvlVn 116 (349)
.|+||||||||.||++++++|.++|++|++++|+........ ..+ ......+..+..| .+.....|.+++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~ 82 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 82 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeee
Confidence 578999999999999999999999999999999865533221 111 1112235566666 223345788888
Q ss_pred cCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHH
Q 039397 117 TASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESL 196 (349)
Q Consensus 117 nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~l 196 (349)
+++... ..+...+.+++... ...++++.||............+...+.......+..
T Consensus 83 ~~~~~~--------------------~~~~~~~~~a~~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (307)
T d1qyca_ 83 TVGSLQ--------------------IESQVNIIKAIKEV---GTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRA 139 (307)
T ss_dssp CCCGGG--------------------SGGGHHHHHHHHHH---CCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHH
T ss_pred cccccc--------------------cchhhHHHHHHHHh---ccccceeeeccccccccccccccccccccccccccch
Confidence 876421 11122222333221 2245666666544443333344444444444444444
Q ss_pred HHHhcCCeeEEEEecCcccCCCCCC----ccccccchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcC
Q 039397 197 RFELNDEVGITIATHGWIGIEMTKG----KFMLEDGAEMQWKEEREVHVAGGPVEDFARLIVSGACRG 260 (349)
Q Consensus 197 a~el~~~I~v~~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~ 260 (349)
..+.+ +..+.+.|+.+-.+.... ...........+..........+..+|+|++++.++.+.
T Consensus 140 ~~~~~--~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 205 (307)
T d1qyca_ 140 IEAEG--IPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP 205 (307)
T ss_dssp HHHHT--CCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred hhccC--CCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh
Confidence 44433 466677776654322111 111111101111111223345778899999999998754
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=3.6e-09 Score=93.60 Aligned_cols=198 Identities=13% Similarity=-0.004 Sum_probs=117.1
Q ss_pred EEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEe-c-------cccCCCcceeeecCcC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSL-N-------NKESKAVDHLVNTASL 120 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-d-------~~~~g~iDvlVnnAg~ 120 (349)
||||||+|.||.+++++|+++|+ .|+++++-....+. ....... ....... | ......+++++|.|+.
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~ 78 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VNLVDLN--IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 78 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-HHHHTSC--CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-hcccccc--hhhhccchHHHHHHhhhhcccchhhhhhhccc
Confidence 89999999999999999999996 68887643222111 1111111 1111111 1 3455678899998875
Q ss_pred CCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----------CCCchhhHHHHHHH
Q 039397 121 GHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----------LPRMSLYASAKAAL 189 (349)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal 189 (349)
.... ....+...+.|+.+...+.+++... +-++++.||.....+ .+....|+.+|.+.
T Consensus 79 ~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~----~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~ 147 (307)
T d1eq2a_ 79 SSTT-------EWDGKYMMDNNYQYSKELLHYCLER----EIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLF 147 (307)
T ss_dssp CCTT-------CCCHHHHHHHTHHHHHHHHHHHHHH----TCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred cccc-------ccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccchh
Confidence 4322 1234667788899988888877643 224666665554432 23457899999999
Q ss_pred HHHHHHHHHHhcCCeeEEEEecCcccCCCCCCccccccc-hhh--hhH---------HHHhhhcCCCCHHHHHHHHHHHH
Q 039397 190 VTFYESLRFELNDEVGITIATHGWIGIEMTKGKFMLEDG-AEM--QWK---------EEREVHVAGGPVEDFARLIVSGA 257 (349)
Q Consensus 190 ~~l~~~la~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~-~~~--~~~---------~~~~~~~~~~~~edvA~~i~~l~ 257 (349)
+.+.+.+..+.+ +.+..+.|..+-.|..........- ... ... ...........++|+++++..++
T Consensus 148 e~~~~~~~~~~~--~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~ 225 (307)
T d1eq2a_ 148 DEYVRQILPEAN--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 225 (307)
T ss_dssp HHHHHHHGGGCS--SCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred hhhccccccccc--cccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHh
Confidence 999998876654 5666666655544322110000000 000 000 01111224556799999999999
Q ss_pred hcCCce
Q 039397 258 CRGDTY 263 (349)
Q Consensus 258 ~~~~~~ 263 (349)
..+...
T Consensus 226 ~~~~~~ 231 (307)
T d1eq2a_ 226 ENGVSG 231 (307)
T ss_dssp HHCCCE
T ss_pred hhcccc
Confidence 887653
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.02 E-value=2.5e-10 Score=101.60 Aligned_cols=188 Identities=11% Similarity=-0.031 Sum_probs=103.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH----HHHhcCCCCeEEEEEecc-------ccCCCcceee
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS----TIDEYNPINEVTLVSLNN-------KESKAVDHLV 115 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~----~~~~~~~~~~~~~~~~d~-------~~~g~iDvlV 115 (349)
.++||||||||.||++++++|.++|++|+++.|+....... ..... ...+..+.+|. +...+.+.++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~~~~~~~ 80 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQVDVVI 80 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhccCcchhh
Confidence 35699999999999999999999999999999976543211 11112 23466677762 3345678888
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC-----CCCchhhHHHHHHHH
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP-----LPRMSLYASAKAALV 190 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~-----~~~~~~Y~asKaal~ 190 (349)
++++.... ..|..+...++.++... ...+.++.||...... ......|..+|...+
T Consensus 81 ~~~~~~~~----------------~~~~~~~~~~l~~a~~~---~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~ 141 (312)
T d1qyda_ 81 SALAGGVL----------------SHHILEQLKLVEAIKEA---GNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVR 141 (312)
T ss_dssp ECCCCSSS----------------STTTTTHHHHHHHHHHS---CCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHH
T ss_pred hhhhhccc----------------ccchhhhhHHHHHHHHh---cCCcEEEEeeccccCCCcccccchhhhhhHHHHHHH
Confidence 88764321 11233333444444322 2346677776543321 122334555555544
Q ss_pred HHHHHHHHHhcCCeeEEEEecCcccCCCCCC----ccccc-cchhhhhHHHHhhhcCCCCHHHHHHHHHHHHhcCC
Q 039397 191 TFYESLRFELNDEVGITIATHGWIGIEMTKG----KFMLE-DGAEMQWKEEREVHVAGGPVEDFARLIVSGACRGD 261 (349)
Q Consensus 191 ~l~~~la~el~~~I~v~~v~PG~v~T~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~~~~~ 261 (349)
.+ ..+.. +..+.+.||.+..+.... ..... .................+.++|+|++++.++.+++
T Consensus 142 ~~----~~~~~--~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~ 211 (312)
T d1qyda_ 142 RA----IEAAS--IPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ 211 (312)
T ss_dssp HH----HHHTT--CCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG
T ss_pred Hh----hcccc--cceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCcc
Confidence 33 33322 556667776653221111 00000 00011111111223457888999999999997653
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.92 E-value=2.7e-09 Score=93.51 Aligned_cols=184 Identities=14% Similarity=0.115 Sum_probs=114.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccccc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEE 128 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~~~ 128 (349)
+||||||||.||.+++++|.++|++|+.++|++-.+..... +. +.-...++|++||+|+........
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~-~~-----------~~l~~~~~d~vih~a~~~~~~~~~- 69 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLA-VN-----------KFFNEKKPNVVINCAAHTAVDKCE- 69 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHH-HH-----------HHHHHHCCSEEEECCCCCCHHHHH-
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHH-HH-----------HHHHHcCCCEEEeecccccccccc-
Confidence 49999999999999999999999999999997643321110 00 000011579999999875432221
Q ss_pred cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEecccccc-----------CCCCchhhHHHHHHHHHHHHHHH
Q 039397 129 VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWL-----------PLPRMSLYASAKAALVTFYESLR 197 (349)
Q Consensus 129 ~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la 197 (349)
...+..++.|+.....+....... ...+++.||...+. +......|+.+|...+.+.+..
T Consensus 70 ----~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~- 140 (281)
T d1vl0a_ 70 ----EQYDLAYKINAIGPKNLAAAAYSV----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL- 140 (281)
T ss_dssp ----HCHHHHHHHHTHHHHHHHHHHHHH----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH-
T ss_pred ----ccchhhcccccccccccccccccc----cccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh-
Confidence 223567788888877777666432 34566666654332 1234567999998887766442
Q ss_pred HHhcCCeeEEEEecCcccCCCCCCccccccchhhhhHHHH-------hhhcCCCCHHHHHHHHHHHHhcCCceE
Q 039397 198 FELNDEVGITIATHGWIGIEMTKGKFMLEDGAEMQWKEER-------EVHVAGGPVEDFARLIVSGACRGDTYV 264 (349)
Q Consensus 198 ~el~~~I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~edvA~~i~~l~~~~~~~i 264 (349)
. .....+.|+.+-.+-.... .......... .........+|+++++..+++.....+
T Consensus 141 ---~--~~~~i~R~~~vyG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~ 204 (281)
T d1vl0a_ 141 ---N--PKYYIVRTAWLYGDGNNFV-----KTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGT 204 (281)
T ss_dssp ---C--SSEEEEEECSEESSSSCHH-----HHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCCEE
T ss_pred ---C--CCccccceeEEeCCCcccc-----cchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcccCc
Confidence 3 4667788888765432110 0000000000 112356788999999999999886643
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.86 E-value=1.6e-08 Score=91.68 Aligned_cols=143 Identities=11% Similarity=-0.019 Sum_probs=87.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc--------CCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE--------SKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~--------~g~iDvlVnn 117 (349)
+.|+|+||||||.||.+++++|.++|++|+++.|+..+.... .+. ....+..+..|... +...|.++.+
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~-~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~ 78 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQ-AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN 78 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHH-TSTTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhc-ccCCCEEEEeeCCCcHHHHHHHhcCCceEEee
Confidence 468999999999999999999999999999999987664321 211 12356777777322 3445555554
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC--CCchhhHHHHHHHHHHHHH
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL--PRMSLYASAKAALVTFYES 195 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~--~~~~~Y~asKaal~~l~~~ 195 (349)
.... . . .|+....+++.++... +..++++.||....... .....|..+|...+.+.+.
T Consensus 79 ~~~~---------~-~-------~~~~~~~~~~~aa~~a---gv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 138 (350)
T d1xgka_ 79 TTSQ---------A-G-------DEIAIGKDLADAAKRA---GTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ 138 (350)
T ss_dssp CCST---------T-S-------CHHHHHHHHHHHHHHH---SCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT
T ss_pred cccc---------c-c-------hhhhhhhHHHHHHHHh---CCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHh
Confidence 3211 0 0 1222233444444321 23467788886654332 3345677888877665443
Q ss_pred HHHHhcCCeeEEEEecCcccCC
Q 039397 196 LRFELNDEVGITIATHGWIGIE 217 (349)
Q Consensus 196 la~el~~~I~v~~v~PG~v~T~ 217 (349)
. . +....+.||....+
T Consensus 139 ~----~--~~~~~vr~~~~~~~ 154 (350)
T d1xgka_ 139 L----G--LPSTFVYAGIYNNN 154 (350)
T ss_dssp S----S--SCEEEEEECEEGGG
T ss_pred h----c--cCceeeeeceeecc
Confidence 2 1 56677777765443
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=98.79 E-value=1.1e-08 Score=89.91 Aligned_cols=129 Identities=16% Similarity=0.055 Sum_probs=82.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCCCccccc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGHTFFFEE 128 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~~~~~~ 128 (349)
+||||||+|.||.+++++|.++|+.|+ ++++...... ++.+.. .+....+ ..++|++||+||........
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~~~~---Dl~~~~----~~~~~i~-~~~~D~Vih~Aa~~~~~~~~- 71 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKEFCG---DFSNPK----GVAETVR-KLRPDVIVNAAAHTAVDKAE- 71 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSSSCC---CTTCHH----HHHHHHH-HHCCSEEEECCCCCCHHHHT-
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCccccC---cCCCHH----HHHHHHH-HcCCCEEEEecccccccccc-
Confidence 499999999999999999999997554 4444332110 100000 0000011 12579999999976443322
Q ss_pred cCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCC-----------CCchhhHHHHHHHHHHHHH
Q 039397 129 VTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPL-----------PRMSLYASAKAALVTFYES 195 (349)
Q Consensus 129 ~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~ 195 (349)
+.-+..+++|+.+...+..++.. .+.+++++||...+.+. .....|+.+|.+.+.+.+.
T Consensus 72 ----~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 72 ----SEPELAQLLNATSVEAIAKAANE----TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (298)
T ss_dssp ----TCHHHHHHHHTHHHHHHHHHHTT----TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred ----cCccccccccccccccchhhhhc----cccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHh
Confidence 23367889999999999998853 34578888777654321 1346799999988766543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.32 E-value=1.4e-06 Score=70.89 Aligned_cols=99 Identities=16% Similarity=0.112 Sum_probs=67.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEe------ccccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSL------NNKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~------d~~~~g~iDvlVnnAg 119 (349)
+|++|||+||+||+|....+.....|++|+.+.+++++.+...+ + +...+..... .....+++|+++++.|
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l--Ga~~vi~~~~~~~~~~~~~~~~gvD~vid~vg 107 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L--GAKEVLAREDVMAERIRPLDKQRWAAAVDPVG 107 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T--TCSEEEECC---------CCSCCEEEEEECST
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c--ccceeeecchhHHHHHHHhhccCcCEEEEcCC
Confidence 48899999999999999999988999999999999888765443 2 1111111110 1223468999999988
Q ss_pred CCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccC
Q 039397 120 LGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLP 175 (349)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~ 175 (349)
.. .+++. +..| +.+|+++.++...+..+
T Consensus 108 g~------------~~~~~---------------l~~l-~~~Griv~~G~~~g~~~ 135 (176)
T d1xa0a2 108 GR------------TLATV---------------LSRM-RYGGAVAVSGLTGGAEV 135 (176)
T ss_dssp TT------------THHHH---------------HHTE-EEEEEEEECSCCSSSCC
T ss_pred ch------------hHHHH---------------HHHh-CCCceEEEeecccCccc
Confidence 42 23332 2233 45789999988766543
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=98.08 E-value=6e-06 Score=66.62 Aligned_cols=77 Identities=13% Similarity=0.144 Sum_probs=61.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
.+++||.|+|-|+ ||.+++++..|.+.|.+|+++.|+.++.+++...+.... .+..+..+.......|++||+..++
T Consensus 14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~~~~~~~~dliIN~Tp~G 90 (170)
T d1nyta1 14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSMDELEGHEFDLIINATSSG 90 (170)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccccccccccccceeecccccC
Confidence 4678999999997 899999999999999999999999999888877664332 3445555555556789999986544
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.98 E-value=4.3e-05 Score=59.95 Aligned_cols=115 Identities=18% Similarity=0.163 Sum_probs=77.6
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhc----CCCCeEEEEEeccccCCCcceeeec
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEY----NPINEVTLVSLNNKESKAVDHLVNT 117 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~~~~d~~~~g~iDvlVnn 117 (349)
+..+++|.|.|| |.+|..+|..++.+|. +++++|+++++++..+.|+. ...........|.+....-|++|..
T Consensus 3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvit 81 (148)
T d1ldna1 3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVIC 81 (148)
T ss_dssp TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEEC
T ss_pred CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEe
Confidence 445678888897 9999999999999985 79999999988777766662 1233445556778888889999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
||...... + +. .+.+..|..-.-.+.+.+.++ ..++.++++|
T Consensus 82 ag~~~~~~--~-~R----~dl~~~N~~i~~~i~~~i~~~--~p~a~~ivvt 123 (148)
T d1ldna1 82 AGANQKPG--E-TR----LDLVDKNIAIFRSIVESVMAS--GFQGLFLVAT 123 (148)
T ss_dssp CSCCCCTT--T-CS----GGGHHHHHHHHHHHHHHHHHH--TCCSEEEECS
T ss_pred cccccccC--c-ch----hHHHHHHHHHHHHHHHHHHhh--CCCceEEEec
Confidence 99753221 1 11 234455654444444444433 1346666654
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.93 E-value=1e-05 Score=65.90 Aligned_cols=70 Identities=9% Similarity=0.098 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
+|++|+|+||+||+|.+.++.....|++|+.+++++++.+..... +.+..+...| ....+++|++++
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~----Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D 104 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GFDAAFNYKTVNSLEEALKKASPDGYDCYFD 104 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSEEEETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh----hhhhhcccccccHHHHHHHHhhcCCCceeEE
Confidence 589999999999999999999999999999999998776544332 2222222121 224457999999
Q ss_pred cCc
Q 039397 117 TAS 119 (349)
Q Consensus 117 nAg 119 (349)
+.|
T Consensus 105 ~vG 107 (182)
T d1v3va2 105 NVG 107 (182)
T ss_dssp SSC
T ss_pred ecC
Confidence 887
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.92 E-value=1.7e-05 Score=63.90 Aligned_cols=78 Identities=18% Similarity=0.190 Sum_probs=63.2
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCCC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
-++++|.|+|-|+ ||.+++++..|.+.+.+|+++.|+.++.+...+.+... ........|.......|++||+.....
T Consensus 14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~-~~~~~~~~~~~~~~~~diiIN~tp~g~ 91 (171)
T d1p77a1 14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY-GNIQAVSMDSIPLQTYDLVINATSAGL 91 (171)
T ss_dssp CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG-SCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc-cccchhhhccccccccceeeecccccc
Confidence 4678999999987 88899999999998999999999999999888777433 245566666666788999999977654
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.86 E-value=5e-05 Score=59.35 Aligned_cols=112 Identities=19% Similarity=0.183 Sum_probs=71.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcC---CCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYN---PINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~---~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
++++.|.|+ |.+|..+|..|+.+| .+|+++|+++++.+..+.|+.+ ..........|.++....|++|..||..
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvitag~~ 83 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEEecccc
Confidence 457888896 999999999999998 5899999999877766666521 2223445567878888899999999965
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
... . +.-.+.+..|..-.-.+.+.+.++ ..++.++++|
T Consensus 84 ~~~------g-~~r~~l~~~N~~i~~~~~~~i~~~--~p~aivivvt 121 (146)
T d1ez4a1 84 QKP------G-ESRLDLVNKNLNILSSIVKPVVDS--GFDGIFLVAA 121 (146)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHT--TCCSEEEECS
T ss_pred cCC------C-CCHHHHHHHHHHHHHHHHHHHhhc--CCCcEEEEeC
Confidence 322 1 122345566665544445444433 1235555544
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.82 E-value=1.7e-05 Score=63.60 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=65.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnnA 118 (349)
++++|||+||+||+|...++.....|++|+.+.+++++.+.+... +. +......| ....+++|+++.+.
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l---Ga-d~vi~~~~~~~~~~~~~~~~gvd~vid~v 98 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL---GA-SEVISREDVYDGTLKALSKQQWQGAVDPV 98 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH---TC-SEEEEHHHHCSSCCCSSCCCCEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh---cc-cceEeccchhchhhhcccCCCceEEEecC
Confidence 466899999999999999988888999999999998887765432 11 22111111 22335799999988
Q ss_pred cCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc
Q 039397 119 SLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW 173 (349)
Q Consensus 119 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~ 173 (349)
|. +.+.+ .+..+ +.+|+||.++...+.
T Consensus 99 gg------------~~~~~---------------~~~~l-~~~G~iv~~G~~~g~ 125 (167)
T d1tt7a2 99 GG------------KQLAS---------------LLSKI-QYGGSVAVSGLTGGG 125 (167)
T ss_dssp CT------------HHHHH---------------HHTTE-EEEEEEEECCCSSCS
T ss_pred cH------------HHHHH---------------HHHHh-ccCceEEEeeccCCC
Confidence 73 22222 23333 457899999877764
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.80 E-value=2.8e-05 Score=62.56 Aligned_cols=70 Identities=13% Similarity=0.121 Sum_probs=51.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----cccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----NKESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~iDvlVnnAg 119 (349)
+|++|+|+||+|++|...++.+...|++|+.+++++++.+... ++ +...+ ....+ ....+++|+++++.|
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~l--Ga~~~-i~~~~~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL--GAEEA-ATYAEVPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT--TCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cc--cccee-eehhhhhhhhhccccccccccccc
Confidence 6899999999999999999988889999999999887766543 22 22222 11112 234567999998765
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.75 E-value=8.3e-05 Score=51.16 Aligned_cols=42 Identities=26% Similarity=0.310 Sum_probs=37.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
++++++|+||+||+|....+.+...|++|+.+.+++++.+-+
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~ 72 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 578999999999999999998888999999999998877654
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.74 E-value=1.4e-05 Score=63.62 Aligned_cols=71 Identities=20% Similarity=0.291 Sum_probs=56.7
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecCcC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTASL 120 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnAg~ 120 (349)
++++|+++|.|+ |++|+.+++.|.++|+ ++.++.|+.++.+++..++. ......+ .+.....|++|++.+.
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-----~~~~~~~~~~~~l~~~Divi~atss 94 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-----GEAVRFDELVDHLARSDVVVSATAA 94 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-----CEECCGGGHHHHHHTCSEEEECCSS
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-----cccccchhHHHHhccCCEEEEecCC
Confidence 688999999998 9999999999999998 69999999998888877652 2222333 3344578999998774
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.69 E-value=0.00027 Score=55.82 Aligned_cols=116 Identities=16% Similarity=0.176 Sum_probs=78.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhc----CCCCeEEEEEeccccCCCcceee
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEY----NPINEVTLVSLNNKESKAVDHLV 115 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~~~~d~~~~g~iDvlV 115 (349)
...++..+|.|.|+ |.+|..+|..|+.+|. +++++|++++.++..+.|+. ...........|.++...-|++|
T Consensus 14 ~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivv 92 (159)
T d2ldxa1 14 EDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVI 92 (159)
T ss_dssp CCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEE
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEE
Confidence 44566667888896 9999999999999985 89999999988877776762 22233444556788888999999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEec
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNAS 169 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~isS 169 (349)
..||......- +..+ .++.|. ...+...+.+.+. +|.++++|-
T Consensus 93 itag~~~~~~~---~R~d----ll~~N~----~i~~~i~~~i~~~~p~~ivivvtN 137 (159)
T d2ldxa1 93 ITAGARMVSGQ---TRLD----LLQRNV----AIMKAIVPGVIQNSPDCKIIVVTN 137 (159)
T ss_dssp ECCSCCCCTTT---CSSC----TTHHHH----HHHHHHTTTHHHHSTTCEEEECSS
T ss_pred EecccccCCCC---CHHH----HHHHHH----HHHHHHHHHHhccCCCeEEEEeCC
Confidence 99997543321 1112 233333 3456666666433 366666654
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.68 E-value=5.3e-05 Score=61.12 Aligned_cols=70 Identities=11% Similarity=0.086 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvlV 115 (349)
.|++|+|+||+||+|...++.....|++|+++++++++.+...+ + +... .+... ....+++|+++
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l--Ga~~--vi~~~~~d~~~~v~~~t~g~g~d~v~ 102 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A--GAWQ--VINYREEDLVERLKEITGGKKVRVVY 102 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H--TCSE--EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c--CCeE--EEECCCCCHHHHHHHHhCCCCeEEEE
Confidence 47899999999999999999999999999999999988765543 3 1221 22211 12345789999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
++.|.
T Consensus 103 d~~g~ 107 (179)
T d1qora2 103 DSVGR 107 (179)
T ss_dssp ECSCG
T ss_pred eCccH
Confidence 98873
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.64 E-value=5.8e-05 Score=60.70 Aligned_cols=70 Identities=16% Similarity=0.155 Sum_probs=49.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
+|++|+|+||+|++|...++.....|++|+++++++++.+.+. ++ +...+ +...+ .....++|+++.
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~--Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d 103 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QN--GAHEV-FNHREVNYIDKIKKYVGEKGIDIIIE 103 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT--TCSEE-EETTSTTHHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEeccccccccccccccccCccccccccccccccccc-cc--Ccccc-cccccccHHHHhhhhhccCCceEEee
Confidence 5889999999999999999999999999999999877665433 32 22222 11111 112346899888
Q ss_pred cCc
Q 039397 117 TAS 119 (349)
Q Consensus 117 nAg 119 (349)
+.|
T Consensus 104 ~~g 106 (174)
T d1yb5a2 104 MLA 106 (174)
T ss_dssp SCH
T ss_pred ccc
Confidence 776
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.63 E-value=0.0003 Score=54.47 Aligned_cols=110 Identities=23% Similarity=0.245 Sum_probs=69.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCC---CCeEEEEEeccccCCCcceeeecCcCCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNP---INEVTLVSLNNKESKAVDHLVNTASLGHT 123 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~---~~~~~~~~~d~~~~g~iDvlVnnAg~~~~ 123 (349)
++.|.|+ |.+|..+|..++.+|. +++++|++++..+....|+.+. .........|.++...-|++|..||....
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~~~ 81 (142)
T d1y6ja1 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANRK 81 (142)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC---
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEecccccC
Confidence 4566687 9999999999999985 8999999999888777777432 22344455667777888999999996532
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
. . +.-...++.|..-...+++.+.++ ..++.++++|
T Consensus 82 ~------~-~~r~~l~~~N~~i~~~i~~~i~~~--~p~ai~ivvt 117 (142)
T d1y6ja1 82 P------G-ETRLDLAKKNVMIAKEVTQNIMKY--YNHGVILVVS 117 (142)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEECS
T ss_pred c------C-cchhHHhhHHHHHHHHHHHHhhcc--CCCceEEEec
Confidence 1 1 223456677775555555444433 1235566554
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.63 E-value=0.00023 Score=56.62 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=49.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec------------cccCCCcce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN------------NKESKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------------~~~~g~iDv 113 (349)
.|.+|+|+| +|++|...++.+...|++|+++++++++++...+ + +.......... ....+++|+
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~--ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~ 101 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C--GADVTLVVDPAKEEESSIIERIRSAIGDLPNV 101 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T--TCSEEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c--CCcEEEeccccccccchhhhhhhcccccCCce
Confidence 578999997 6899999999999999999999999998765443 2 11111111110 112356899
Q ss_pred eeecCcC
Q 039397 114 LVNTASL 120 (349)
Q Consensus 114 lVnnAg~ 120 (349)
+|.++|.
T Consensus 102 vid~~g~ 108 (170)
T d1e3ja2 102 TIDCSGN 108 (170)
T ss_dssp EEECSCC
T ss_pred eeecCCC
Confidence 9999884
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.58 E-value=6.3e-05 Score=60.83 Aligned_cols=70 Identities=16% Similarity=0.063 Sum_probs=50.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVn 116 (349)
+|++|||+||+|++|...++.+...|++|+++.+++++.+.+. +. +.+..+..-+ .....++|++++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~---Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d 100 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL---GVEYVGDSRSVDFADEILELTDGYGVDVVLN 100 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TT---CCSEEEETTCSTHHHHHHHHTTTCCEEEEEE
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cc---cccccccCCccCHHHHHHHHhCCCCEEEEEe
Confidence 4789999999999999999999899999999999887765433 21 2222211111 112357999999
Q ss_pred cCc
Q 039397 117 TAS 119 (349)
Q Consensus 117 nAg 119 (349)
+.|
T Consensus 101 ~~g 103 (183)
T d1pqwa_ 101 SLA 103 (183)
T ss_dssp CCC
T ss_pred ccc
Confidence 887
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.57 E-value=0.0006 Score=52.66 Aligned_cols=111 Identities=16% Similarity=0.053 Sum_probs=73.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecC--cchhhhHHHHhc---CCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARR--ENRLQGSTIDEY---NPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~--~~~l~~~~~~~~---~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
++.|+||+|.+|..+|..++.+|. ++++.+.+ ++..+..+.|+. ...........|.++...-|++|..||..
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvitaG~~ 81 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGIP 81 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEEecccc
Confidence 588999999999999999999985 79999964 344444444552 12233444556777778899999999964
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
... . ++-.+.++.|..=.-.+.+.+..+- .++.++++|
T Consensus 82 ~~~------g-~~R~dl~~~N~~I~~~i~~~i~~~~--p~~i~ivvt 119 (142)
T d1o6za1 82 RQP------G-QTRIDLAGDNAPIMEDIQSSLDEHN--DDYISLTTS 119 (142)
T ss_dssp CCT------T-CCHHHHHHHHHHHHHHHHHHHHTTC--SCCEEEECC
T ss_pred ccc------C-CchhhHHHHHHHHHHHHHHHHHhcC--CCceEEEec
Confidence 321 1 2335677878766555555554331 235666654
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.56 E-value=2.9e-05 Score=62.32 Aligned_cols=45 Identities=9% Similarity=0.086 Sum_probs=40.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE 91 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~ 91 (349)
.+|.|+|.|| |.+|+.+|+.|+++|++|++++|+.++.++++...
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~ 45 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV 45 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc
Confidence 3689999987 99999999999999999999999999888766543
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.54 E-value=0.00029 Score=54.83 Aligned_cols=74 Identities=16% Similarity=0.190 Sum_probs=57.4
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhc----CCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEY----NPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
|++.|.|+ |.+|..+|..|+.+| .++++.|+++++++....|+. ...........|.+....-|++|..||..
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~~ 80 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNI 80 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCG
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEecccc
Confidence 67778895 899999999999998 489999999988776666652 22233444566777778889999999975
Q ss_pred C
Q 039397 122 H 122 (349)
Q Consensus 122 ~ 122 (349)
.
T Consensus 81 ~ 81 (146)
T d1hyha1 81 K 81 (146)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.52 E-value=0.00017 Score=58.18 Aligned_cols=43 Identities=26% Similarity=0.304 Sum_probs=37.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
+++++||+||+||+|....+.....|++|+.++|++++.+.+.
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~ 73 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK 73 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence 4568999999999999999999999999999999988876544
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.51 E-value=0.00068 Score=53.41 Aligned_cols=116 Identities=15% Similarity=0.145 Sum_probs=76.0
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcC----CCCeEEEEEeccccCCCcceeeec
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYN----PINEVTLVSLNNKESKAVDHLVNT 117 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~~~~d~~~~g~iDvlVnn 117 (349)
.+..+++.|.|+ |.+|..+|..|+.+|. +++++|++++..+..+.|+.+ ..........|.++...-|++|..
T Consensus 17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVit 95 (160)
T d1i0za1 17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVT 95 (160)
T ss_dssp CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEEC
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEe
Confidence 345678888896 9999999999999995 899999998888777766622 122334455667788889999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
||...... ++-...++.|..-.-.+++...+. ..++-++++|-
T Consensus 96 Ag~~~~~g-------~tR~~l~~~N~~i~~~i~~~i~~~--~p~aiiivvtN 138 (160)
T d1i0za1 96 AGVRQQEG-------ESRLNLVQRNVNVFKFIIPQIVKY--SPDCIIIVVSN 138 (160)
T ss_dssp CSCCCCTT-------CCGGGGHHHHHHHHHHHHHHHHHH--CTTCEEEECSS
T ss_pred cCCccccC-------cchHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEeCC
Confidence 99753211 111344455655443334333332 12356666653
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.51 E-value=0.0011 Score=51.26 Aligned_cols=101 Identities=23% Similarity=0.148 Sum_probs=67.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcc--hhhhHHHHhc----CCC--CeEEEEEe-ccccCCCcceeeec
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARREN--RLQGSTIDEY----NPI--NEVTLVSL-NNKESKAVDHLVNT 117 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~--~l~~~~~~~~----~~~--~~~~~~~~-d~~~~g~iDvlVnn 117 (349)
++.|.||+|.+|..+|..++.+| .++++++++++ +++..+.++. ... .++..... |.+....-|++|..
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVit 81 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIIT 81 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEEe
Confidence 48999999999999999999999 49999999863 3444444442 111 22222222 45667788999999
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccc
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPY 156 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 156 (349)
||..... . ++-...++.|..=.-.+.+.+.++
T Consensus 82 AG~~~~~------g-~sR~dl~~~Na~iv~~i~~~i~~~ 113 (145)
T d1hyea1 82 SGVPRKE------G-MSRMDLAKTNAKIVGKYAKKIAEI 113 (145)
T ss_dssp CSCCCCT------T-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCC------C-CChhhhhhhhHHHHHHHHHHHhcc
Confidence 9974321 1 223567778877666666666544
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.50 E-value=8.5e-05 Score=53.22 Aligned_cols=74 Identities=19% Similarity=0.096 Sum_probs=52.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
+++||+++|.|. |.-|.++|+.|.++|++|++.+.+...... .++.. ......-..+......+|.+|...|+.
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~d~vi~SPGi~ 75 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL--DKLPE-AVERHTGSLNDEWLMAADLIVASPGIA 75 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG--GGSCT-TSCEEESBCCHHHHHHCSEEEECTTSC
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH--HHHhh-ccceeecccchhhhccCCEEEECCCCC
Confidence 689999999998 667999999999999999999986543221 12221 222332233334445789999999984
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.43 E-value=0.00023 Score=56.73 Aligned_cols=68 Identities=22% Similarity=0.272 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
++|.|+|-|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+...... .. .+.......|++||+..++
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~-----~~--~~~~~~~~~DliINaTpiG 84 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY-----AY--INSLENQQADILVNVTSIG 84 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC-----EE--ESCCTTCCCSEEEECSSTT
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhh-----hh--hhcccccchhhheeccccC
Confidence 5788999987 9999999999999997 799999999988877765521 11 2222334679999986544
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.43 E-value=0.0012 Score=50.80 Aligned_cols=110 Identities=22% Similarity=0.215 Sum_probs=71.6
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhcCC----CCeEEE-EEeccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEYNP----INEVTL-VSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~-~~~d~~~~g~iDvlVnnAg~~ 121 (349)
++.|+|| |.+|..++..++..| .++++.|+++++++....++... ...... ...|.+.....|++|..||..
T Consensus 2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag~~ 80 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP 80 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEecC
Confidence 4677796 999999999999998 59999999998877655554221 112222 345677778899999999974
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
... . +.-...++.|..-...+.+.+.++ ..++.++++|
T Consensus 81 ~~~------g-~~r~~l~~~N~~i~~~i~~~i~~~--~p~aivivvt 118 (142)
T d1guza1 81 RKP------G-MTREDLLMKNAGIVKEVTDNIMKH--SKNPIIIVVS 118 (142)
T ss_dssp CCT------T-CCHHHHHHHHHHHHHHHHHHHHHH--CSSCEEEECC
T ss_pred CCC------C-CchHHHHHHHHHHHHHHHHHhhcc--CCCeEEEEec
Confidence 321 1 122455666666555555555443 1335555554
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.40 E-value=0.0017 Score=50.14 Aligned_cols=110 Identities=15% Similarity=0.074 Sum_probs=71.9
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcC----CCCeEEEEEeccccCCCcceeeecCcCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYN----PINEVTLVSLNNKESKAVDHLVNTASLGH 122 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~~~~d~~~~g~iDvlVnnAg~~~ 122 (349)
++.|.|+ |.+|.++|..++.+|. ++++.|+++++.+..+.|+.+ ..........|.+....-|++|..||...
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVitaG~~~ 81 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPRQ 81 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCCC
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEEeccccc
Confidence 4667796 9999999999999985 899999999887766655522 12222333445666677899999999743
Q ss_pred CccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 123 TFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
.. . +.-.+.+..|..=.-.+++.+.++ ..++.++++|
T Consensus 82 ~~------g-~~R~dl~~~N~~i~~~i~~~i~~~--~p~ai~ivvt 118 (143)
T d1llda1 82 KP------G-QSRLELVGATVNILKAIMPNLVKV--APNAIYMLIT 118 (143)
T ss_dssp CT------T-CCHHHHHHHHHHHHHHHHHHHHHH--CTTSEEEECC
T ss_pred CC------C-CchhhhhhhhHHHHHHHHHHHHhh--CCCeEEEEeC
Confidence 21 1 222466777775555555554433 1235555554
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.40 E-value=0.001 Score=51.15 Aligned_cols=108 Identities=16% Similarity=0.176 Sum_probs=71.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcC--CeEEEEecCcchhhhHHHHhc---CCCCeEEEEEeccccCCCcceeeecCcCCCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRK--ANLVLVARRENRLQGSTIDEY---NPINEVTLVSLNNKESKAVDHLVNTASLGHT 123 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G--~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~~~~d~~~~g~iDvlVnnAg~~~~ 123 (349)
++.|.|+ |.+|..+|..++.+| .++++.|+++++++....++. ...........|.++...-|++|..||....
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~~~ 80 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVPQK 80 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCCCC
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEecccccC
Confidence 4666796 899999999999988 589999999988776666651 1122344556677778889999999997532
Q ss_pred ccccccCCcchHHHHHHhHhhhhHHHHHHhcccccc--CCCeEEEEe
Q 039397 124 FFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHE--SNGRVVVNA 168 (349)
Q Consensus 124 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~g~IV~is 168 (349)
. . +.-...+..|..= .+...+.+.+ .++.++++|
T Consensus 81 ~------g-~~r~dl~~~N~~I----~~~i~~~i~~~~p~aivivvt 116 (140)
T d1a5za1 81 P------G-ETRLQLLGRNARV----MKEIARNVSKYAPDSIVIVVT 116 (140)
T ss_dssp S------S-CCHHHHHHHHHHH----HHHHHHHHHHHCTTCEEEECS
T ss_pred C------C-cchhhhhccccch----HHHHHHHHHhcCCCcEEEEeC
Confidence 2 1 1224556666543 4444444433 235555554
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.35 E-value=0.00046 Score=54.87 Aligned_cols=71 Identities=20% Similarity=0.159 Sum_probs=50.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----cccCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----NKESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----~~~~g~iDvlVnnAg~ 120 (349)
.|++++|.|+ |++|...++.+...|++|+++++++++++... ++ +...+ +...+ ....+.+|+++.+.|.
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l--Ga~~~-i~~~~~~~~~~~~~~~~d~vi~~~~~ 101 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM--GADHY-IATLEEGDWGEKYFDTFDLIVVCASS 101 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH--TCSEE-EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc--CCcEE-eeccchHHHHHhhhcccceEEEEecC
Confidence 5889999987 89999998888789999999999998877543 33 11111 11111 2334678999988775
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 102 ~ 102 (168)
T d1piwa2 102 L 102 (168)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=97.34 E-value=0.00057 Score=56.01 Aligned_cols=72 Identities=19% Similarity=0.212 Sum_probs=53.5
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
-..+++||+|+|-| .|.+|..+|+.|.+.|++|++++.+.+.+...... ....+..+.-..-.+|+++-||.
T Consensus 21 g~~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~------g~~~~~~~~~~~~~~DI~iPcA~ 92 (201)
T d1c1da1 21 GLGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVAL------GHTAVALEDVLSTPCDVFAPCAM 92 (201)
T ss_dssp TCCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT------TCEECCGGGGGGCCCSEEEECSC
T ss_pred CCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh------cccccCccccccccceeeecccc
Confidence 34579999999998 67799999999999999999999988776654321 12223333333447899998875
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00033 Score=56.61 Aligned_cols=78 Identities=21% Similarity=0.244 Sum_probs=53.8
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHH---HHhc-CCCCeEEEEEec-----cccCCCcc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGST---IDEY-NPINEVTLVSLN-----NKESKAVD 112 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~---~~~~-~~~~~~~~~~~d-----~~~~g~iD 112 (349)
.++++|+|+|.|+ ||.|++++..|.+.|. +++++.|+.++.+.+. +.+. .....+...... .+.....|
T Consensus 14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 92 (182)
T d1vi2a1 14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASAD 92 (182)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccc
Confidence 3789999999998 7999999999999997 7899999987766543 2331 112222222221 12234679
Q ss_pred eeeecCcCC
Q 039397 113 HLVNTASLG 121 (349)
Q Consensus 113 vlVnnAg~~ 121 (349)
++||+....
T Consensus 93 iiIN~Tp~G 101 (182)
T d1vi2a1 93 ILTNGTKVG 101 (182)
T ss_dssp EEEECSSTT
T ss_pred eeccccCCc
Confidence 999997654
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.33 E-value=0.0013 Score=51.49 Aligned_cols=118 Identities=19% Similarity=0.108 Sum_probs=72.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcC-----CCCeEEEEEec-cccCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYN-----PINEVTLVSLN-NKESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~-----~~~~~~~~~~d-~~~~g~iDvlVnnA 118 (349)
+.+++.|.|+ |.+|..+|..++..| +++++.|.+++.++..+.++.+ ..........+ .+....-|++|..|
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvita 84 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 84 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEec
Confidence 3467888897 999999999999988 5899999999887776666521 11112222222 34456789999999
Q ss_pred cCCCCcc-ccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 119 SLGHTFF-FEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 119 g~~~~~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
|...... .... ..-...+..|..-...+++.+.++ ..++.++++|.
T Consensus 85 g~~~~~g~~~~~---~tR~~l~~~n~~iv~~i~~~i~~~--~p~aiviivsN 131 (154)
T d1pzga1 85 GLTKVPGKPDSE---WSRNDLLPFNSKIIREIGQNIKKY--CPKTFIIVVTN 131 (154)
T ss_dssp SCSSCTTCCGGG---CCGGGGHHHHHHHHHHHHHHHHHH--CTTCEEEECCS
T ss_pred ccccCCCCCCcc---cchhhhhhhhHHHHHHHHHHHHhc--CCCcEEEEeCC
Confidence 9864322 1111 111344555665555555554433 12356666553
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.30 E-value=0.00093 Score=51.69 Aligned_cols=110 Identities=15% Similarity=0.051 Sum_probs=71.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCC--eE-EEEEec--cccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPIN--EV-TLVSLN--NKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~--~~-~~~~~d--~~~~g~iDvlVnnAg~~ 121 (349)
++.|+||+|.+|.++|..|+.+|. ++++++.++.+.+ +.++.+... .. ..+..+ .+....-|++|..||..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~ 79 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence 588999999999999999999985 7999998765433 345533221 11 122222 34457789999999974
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... . +.-.+.++.|..-.-.+.+.+.++ ..++.|+++|.
T Consensus 80 ~~~------g-~sR~~ll~~N~~i~~~i~~~i~~~--~p~~iiivvtN 118 (144)
T d1mlda1 80 RKP------G-MTRDDLFNTNATIVATLTAACAQH--CPDAMICIISN 118 (144)
T ss_dssp CCT------T-CCGGGGHHHHHHHHHHHHHHHHHH--CTTSEEEECSS
T ss_pred CCC------C-CCcchHHHHHHHHHHHHHHHHHhc--CCCeEEEEecC
Confidence 321 1 122456777877766666666554 23467777664
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.29 E-value=0.0017 Score=50.51 Aligned_cols=117 Identities=15% Similarity=0.107 Sum_probs=72.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCC----CCeEEEE-EeccccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNP----INEVTLV-SLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~-~~d~~~~g~iDvlVnnAg~~ 121 (349)
.++.|.|+ |++|..+|..++.++ .++++.|++++..+..+.++.+. ....... ..|.+....-|++|..||..
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~~ 82 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGFT 82 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSCS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEecccc
Confidence 46777795 999999999888887 58999999998877766666321 1222222 34567778899999999975
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
....-.+. + .+-...++.|..-...+.+.+..+ ..++.++++|-
T Consensus 83 ~~~g~~~~-~-~~R~~l~~~N~~iv~~i~~~i~~~--~p~aivivvtN 126 (150)
T d1t2da1 83 KAPGKSDK-E-WNRDDLLPLNNKIMIEIGGHIKKN--CPNAFIIVVTN 126 (150)
T ss_dssp SCTTCCST-T-CCGGGGHHHHHHHHHHHHHHHHHH--CTTSEEEECSS
T ss_pred cCCCCCcc-c-cchhHHHHHHHHHHHHHHHHHHhc--CCCeEEEEecC
Confidence 43221111 1 112345666765544444444433 12355666553
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.28 E-value=0.00033 Score=56.31 Aligned_cols=76 Identities=21% Similarity=0.330 Sum_probs=54.2
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC--CCCe--EEEEEeccccCCCcceeeecCc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN--PINE--VTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~--~~~~~~d~~~~g~iDvlVnnAg 119 (349)
+++||.|+|.|+ ||.+++++..|.+.| +|.++.|+.++.+++..++.. .... ..-...........|++||+-.
T Consensus 15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp 92 (177)
T d1nvta1 15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP 92 (177)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCc
Confidence 589999999987 789999999998877 999999999998887765521 1111 1111111334467899999865
Q ss_pred CC
Q 039397 120 LG 121 (349)
Q Consensus 120 ~~ 121 (349)
..
T Consensus 93 ~g 94 (177)
T d1nvta1 93 IG 94 (177)
T ss_dssp TT
T ss_pred cc
Confidence 54
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.26 E-value=0.0014 Score=50.43 Aligned_cols=109 Identities=21% Similarity=0.184 Sum_probs=67.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCC----CCeEEEE-EeccccCCCcceeeecCcCC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNP----INEVTLV-SLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~-~~d~~~~g~iDvlVnnAg~~ 121 (349)
|++.|.|+ |.+|..+|..|+.+| +++++.+.+++..+..+.++.+. ....... ..|.+....-|++|..||..
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvitag~~ 80 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAP 80 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSCC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEEeeecc
Confidence 56777796 999999999999988 59999999998877766666322 1122222 45667777889999999975
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccC--CCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHES--NGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~g~IV~is 168 (349)
.... +.-.+.+..|.. .++...+.+.+. ++.++++|
T Consensus 81 ~~~~-------~~r~dl~~~N~~----i~~~i~~~i~k~~p~aivivvt 118 (142)
T d1uxja1 81 RKPG-------MSREDLIKVNAD----ITRACISQAAPLSPNAVIIMVN 118 (142)
T ss_dssp ----------------CHHHHHH----HHHHHHHHHGGGCTTCEEEECS
T ss_pred CCcC-------cchhHHHhHHHH----HHHHHHHHHhccCCCceEEEeC
Confidence 4221 112344556654 344444444332 35555543
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.25 E-value=0.00086 Score=52.50 Aligned_cols=112 Identities=15% Similarity=0.109 Sum_probs=68.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC---------eEEEEecCcchhhhHHHHhcCC----CCeEEEEEeccccCCCcceee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA---------NLVLVARRENRLQGSTIDEYNP----INEVTLVSLNNKESKAVDHLV 115 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~---------~Vv~~~r~~~~l~~~~~~~~~~----~~~~~~~~~d~~~~g~iDvlV 115 (349)
+|.|+||+|.+|..++..|+..+. +++..+++.+.++....+.... ...+.....+.+.....|++|
T Consensus 6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~advVi 85 (154)
T d1y7ta1 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYAL 85 (154)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccEEE
Confidence 799999999999999999998763 2333345555555555554222 112233333466778899999
Q ss_pred ecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 116 NTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 116 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
..||.... +. ++-++.++.|+.-.-.+.+....+- ...+.|+.+|
T Consensus 86 itaG~~~~------pg-~~r~dl~~~N~~i~~~~~~~i~k~a-~~~~~vivvs 130 (154)
T d1y7ta1 86 LVGAAPRK------AG-MERRDLLQVNGKIFTEQGRALAEVA-KKDVKVLVVG 130 (154)
T ss_dssp ECCCCCCC------TT-CCHHHHHHHHHHHHHHHHHHHHHHS-CTTCEEEECS
T ss_pred eecCcCCC------CC-CcHHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEec
Confidence 99998532 11 2335667777766666655554431 1124455544
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.23 E-value=0.00019 Score=58.46 Aligned_cols=72 Identities=13% Similarity=0.055 Sum_probs=48.7
Q ss_pred CCEEE-EeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------------cccCCC
Q 039397 47 DKVVI-ITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------------NKESKA 110 (349)
Q Consensus 47 ~k~vl-VTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------------~~~~g~ 110 (349)
|++++ ++||+||+|.+..+..-..|++|+.+.|+.++.++..+.+...+.+.. +..+ ....++
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~v-i~~~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV-ITEDQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE-EEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEE-EeccccchhHHHHHHHHHHhhccCC
Confidence 55555 479999999999998888999999999887776655444422222222 2221 112457
Q ss_pred cceeeecCc
Q 039397 111 VDHLVNTAS 119 (349)
Q Consensus 111 iDvlVnnAg 119 (349)
+|+++++.|
T Consensus 108 vdvv~D~vg 116 (189)
T d1gu7a2 108 AKLALNCVG 116 (189)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999998876
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.20 E-value=0.0011 Score=53.28 Aligned_cols=70 Identities=21% Similarity=0.245 Sum_probs=49.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec------------cccCCCcc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN------------NKESKAVD 112 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d------------~~~~g~iD 112 (349)
.|++|+|+|+ |++|...++.+...|+ +|+++++++++++.. .++ +. +..+-..+ .....++|
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l--Ga-~~vi~~~~~~~~~~~~~i~~~~~~~g~D 102 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI--GA-DLTLNRRETSVEERRKAIMDITHGRGAD 102 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT--TC-SEEEETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc--cc-eEEEeccccchHHHHHHHHHhhCCCCce
Confidence 5899999997 8999999999999998 899999999887644 333 11 11111111 11233689
Q ss_pred eeeecCcC
Q 039397 113 HLVNTASL 120 (349)
Q Consensus 113 vlVnnAg~ 120 (349)
++|.+.|.
T Consensus 103 vvid~vG~ 110 (182)
T d1vj0a2 103 FILEATGD 110 (182)
T ss_dssp EEEECSSC
T ss_pred EEeecCCc
Confidence 99999874
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.20 E-value=0.0018 Score=51.70 Aligned_cols=113 Identities=18% Similarity=0.126 Sum_probs=69.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCc--chhhhHHHHhcCC---CC-eEEEEEeccccCCCccee
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA-------NLVLVARRE--NRLQGSTIDEYNP---IN-EVTLVSLNNKESKAVDHL 114 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~--~~l~~~~~~~~~~---~~-~~~~~~~d~~~~g~iDvl 114 (349)
-+|.||||+|.||..++..|++... .+.+.+..+ +.++...-++.+. .. ....-..+.+.+...|++
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDvV 104 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWA 104 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCceE
Confidence 3699999999999999999998532 455556544 3344444444221 11 222222336778889999
Q ss_pred eecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 115 VNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 115 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
|..||.... +-+...+.++.|..-.-...+++.++-. ....|+.+|
T Consensus 105 vi~ag~~rk-------pg~tR~Dll~~N~~I~k~~~~~i~~~a~-~~~~vlvv~ 150 (175)
T d7mdha1 105 LLIGAKPRG-------PGMERAALLDINGQIFADQGKALNAVAS-KNVKVLVVG 150 (175)
T ss_dssp EECCCCCCC-------TTCCHHHHHHHHHHHHHHHHHHHHHHSC-TTCEEEECS
T ss_pred EEeeccCCC-------CCCcHHHHHHHHHHHHHHHHHHHHhhCC-CCcEEEEec
Confidence 999997532 1234567888887666666665554421 124455543
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.19 E-value=0.0044 Score=47.54 Aligned_cols=110 Identities=15% Similarity=0.045 Sum_probs=73.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcC----CCCe-EEEEEeccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYN----PINE-VTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~----~~~~-~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
++.|.|+ |.+|..+|..++.+|. +++++|++++..+..+.|+.+ .... ......|.+....-|++|..||..
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvitag~~ 80 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEEecccc
Confidence 4667786 9999999999999984 799999999887776666621 1122 233345678888899999999965
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
... . +.-.+.+..|..-.....+.+.++ ..++.++++|
T Consensus 81 ~~~------g-~~r~~l~~~n~~i~~~i~~~i~~~--~p~aivivvt 118 (142)
T d1ojua1 81 RKP------G-MTRLDLAHKNAGIIKDIAKKIVEN--APESKILVVT 118 (142)
T ss_dssp CCS------S-CCHHHHHHHHHHHHHHHHHHHHTT--STTCEEEECS
T ss_pred CCC------C-CchHHHHHHhhHHHHHHHHHHHhh--CCCcEEEEec
Confidence 321 2 223566666776655555555443 1235555554
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.00085 Score=53.20 Aligned_cols=69 Identities=17% Similarity=0.147 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----cccCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----NKESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----~~~~g~iDvlVnnAg~ 120 (349)
.|++|+|.|+ |++|...++.+...|++++++++++++.+.. .++. .+. ++... ....+++|+++.+.|.
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~lG---ad~-~i~~~~~~~~~~~~~~~D~vid~~g~ 103 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALG---ADE-VVNSRNADEMAAHLKSFDFILNTVAA 103 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHT---CSE-EEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hccC---CcE-EEECchhhHHHHhcCCCceeeeeeec
Confidence 5889999986 8999999988888999999999998876533 3331 111 12211 3344679999999884
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.06 E-value=0.00084 Score=53.25 Aligned_cols=70 Identities=17% Similarity=0.256 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvl 114 (349)
.|++++|.|++|++|...++.+...|+ +|+++++++++++...+ + +.+ ..+..+ ....+.+|++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~---Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~v 101 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A---GAD-YVINASMQDPLAEIRRITESKGVDAV 101 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H---TCS-EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c---CCc-eeeccCCcCHHHHHHHHhhcccchhh
Confidence 578999999999999999999999994 89999999887665443 2 111 122211 1123568999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
+.++|.
T Consensus 102 id~~g~ 107 (170)
T d1jvba2 102 IDLNNS 107 (170)
T ss_dssp EESCCC
T ss_pred hccccc
Confidence 998874
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.05 E-value=0.00064 Score=56.74 Aligned_cols=73 Identities=21% Similarity=0.222 Sum_probs=51.6
Q ss_pred CCCCCCEEEEeCCC----------------chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--
Q 039397 43 ENMEDKVVIITGAS----------------SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN-- 104 (349)
Q Consensus 43 ~~l~~k~vlVTGas----------------~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-- 104 (349)
.||+||+||||+|. |-.|.+||+++..+||+|.++........ ...+..+...
T Consensus 2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~---------p~~~~~~~~~t~ 72 (223)
T d1u7za_ 2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT---------PPFVKRVDVMTA 72 (223)
T ss_dssp CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC---------CTTEEEEECCSH
T ss_pred cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc---------ccccccceehhh
Confidence 58999999999874 78999999999999999999876432110 0112222221
Q ss_pred -------cccCCCcceeeecCcCCCCc
Q 039397 105 -------NKESKAVDHLVNTASLGHTF 124 (349)
Q Consensus 105 -------~~~~g~iDvlVnnAg~~~~~ 124 (349)
.+.....|++|.+|+++...
T Consensus 73 ~~m~~~~~~~~~~~D~~i~aAAvsDf~ 99 (223)
T d1u7za_ 73 LEMEAAVNASVQQQNIFIGCAAVADYR 99 (223)
T ss_dssp HHHHHHHHHHGGGCSEEEECCBCCSEE
T ss_pred HHHHHHHHhhhccceeEeeeechhhhh
Confidence 23345679999999987543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.04 E-value=0.00043 Score=56.08 Aligned_cols=98 Identities=9% Similarity=0.130 Sum_probs=57.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEE-EecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVL-VARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~-~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnn 117 (349)
++++|||+||+||+|...++-.-..|+++++ +++++++...+..++. ...+.-...+ .....++|+++.+
T Consensus 30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~g--ad~vi~~~~~~~~~~~~~~~~~GvDvv~D~ 107 (187)
T d1vj1a2 30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELG--FDAAVNYKTGNVAEQLREACPGGVDVYFDN 107 (187)
T ss_dssp SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSC--CSEEEETTSSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhccc--ceEEeeccchhHHHHHHHHhccCceEEEec
Confidence 3489999999999999999988889986554 5666666555554431 1111111111 1123469999988
Q ss_pred CcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccc
Q 039397 118 ASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENW 173 (349)
Q Consensus 118 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~ 173 (349)
.|. +.+++ .+..+ +.+|+++.+++.+++
T Consensus 108 vGg------------~~~~~---------------~~~~l-~~~G~iv~~G~~s~~ 135 (187)
T d1vj1a2 108 VGG------------DISNT---------------VISQM-NENSHIILCGQISQY 135 (187)
T ss_dssp SCH------------HHHHH---------------HHTTE-EEEEEEEEC------
T ss_pred CCc------------hhHHH---------------Hhhhc-cccccEEEecccccc
Confidence 872 11222 23333 457899998776654
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.01 E-value=0.00094 Score=53.29 Aligned_cols=70 Identities=9% Similarity=0.102 Sum_probs=50.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvl 114 (349)
.|.+|+|.|+ +|+|...+..+...|+ +|+++++++++++...+. +. .......+ ....+++|++
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~---Ga-~~~i~~~~~~~~~~~~~~~~~~~G~D~v 102 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV---GA-TECVNPQDYKKPIQEVLTEMSNGGVDFS 102 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT---TC-SEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh---CC-eeEEecCCchhHHHHHHHHHhcCCCCEE
Confidence 5789999999 7899999999999985 899999999887754432 11 11111111 2334679999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
|.+.|.
T Consensus 103 id~~G~ 108 (176)
T d2jhfa2 103 FEVIGR 108 (176)
T ss_dssp EECSCC
T ss_pred EecCCc
Confidence 999885
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.98 E-value=0.0031 Score=48.62 Aligned_cols=111 Identities=14% Similarity=0.059 Sum_probs=69.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHc---CCeEEEEecCcchhhhHHHHhcCCCC--eEEEEE-e-ccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGEQIAYEYAKR---KANLVLVARRENRLQGSTIDEYNPIN--EVTLVS-L-NNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~---G~~Vv~~~r~~~~l~~~~~~~~~~~~--~~~~~~-~-d~~~~g~iDvlVnnAg~~ 121 (349)
++.|+|++|.+|.++|..|+.+ +.++++.+..+ ..+..+.|+.+... ....+. . |.+....-|++|..||..
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~~ 80 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVR 80 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSCC
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCcc
Confidence 5789999999999999998754 47899999864 45555566643322 122221 1 233445679999999975
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEec
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNAS 169 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS 169 (349)
... . ++-.+.++.|..-.-.+.+.+.++- .++.+|++|.
T Consensus 81 ~k~------g-~~R~dl~~~N~~i~~~v~~~i~~~~--p~aivivvtN 119 (145)
T d2cmda1 81 RKP------G-MDRSDLFNVNAGIVKNLVQQVAKTC--PKACIGIITN 119 (145)
T ss_dssp CCT------T-CCGGGGHHHHHHHHHHHHHHHHHHC--TTSEEEECSS
T ss_pred CCC------C-cchhhHHHHHHHHHHHHHHHHHhhC--CCcEEEEccC
Confidence 321 1 2224566777666656666555442 3466666664
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.91 E-value=0.0019 Score=47.48 Aligned_cols=71 Identities=18% Similarity=0.096 Sum_probs=47.5
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec--cccCCCcceeeecC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN--NKESKAVDHLVNTA 118 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d--~~~~g~iDvlVnnA 118 (349)
.+++||+++|.|+ |.+|..-++.|.+.|++|++++....+.. ...... ..+...... .+.....+.++.+.
T Consensus 8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~--~~~~~~--~~i~~~~~~~~~~dl~~~~lv~~at 80 (113)
T d1pjqa1 8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQF--TVWANE--GMLTLVEGPFDETLLDSCWLAIAAT 80 (113)
T ss_dssp ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHH--HHHHTT--TSCEEEESSCCGGGGTTCSEEEECC
T ss_pred EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHH--HHHHhc--CCceeeccCCCHHHhCCCcEEeecC
Confidence 4899999999998 55999999999999999999987654322 222222 233333322 34455566666543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.86 E-value=0.0014 Score=49.76 Aligned_cols=50 Identities=14% Similarity=0.329 Sum_probs=41.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d 104 (349)
+|+|.|+ |.+|+.+++.|.++|++|++++++++..+....+. ...++..|
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd 51 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGD 51 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCc
Confidence 6899998 99999999999999999999999999888765542 23455555
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.85 E-value=0.00099 Score=53.25 Aligned_cols=69 Identities=16% Similarity=0.141 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEe-c---------cccCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSL-N---------NKESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~-d---------~~~~g~iDvl 114 (349)
.|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++... ++. . + ..+.. + .....++|++
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lG--a-~-~~i~~~~~~~~~~v~~~t~g~G~D~v 100 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYG--A-T-DILNYKNGHIEDQVMKLTNGKGVDRV 100 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHT--C-S-EEECGGGSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhC--c-c-ccccccchhHHHHHHHHhhccCcceE
Confidence 4789999986 8999999999999998 7999999988866543 331 1 1 12211 1 1223459999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
|.++|.
T Consensus 101 id~~g~ 106 (174)
T d1jqba2 101 IMAGGG 106 (174)
T ss_dssp EECSSC
T ss_pred EEccCC
Confidence 999984
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0017 Score=51.48 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=50.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec----------cccCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN----------NKESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----------~~~~g~iDvl 114 (349)
.|.+|+|.|+ |++|...++.+...|+ +|+++++++++++... ++ +...+.....+ ....+++|++
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~--Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvv 101 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI--GADLVLQISKESPQEIARKVEGQLGCKPEVT 101 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT--TCSEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh--CCcccccccccccccccccccccCCCCceEE
Confidence 4679999987 9999999999999999 7999999998877543 33 12222221111 1223578999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
|.+.|.
T Consensus 102 id~~G~ 107 (171)
T d1pl8a2 102 IECTGA 107 (171)
T ss_dssp EECSCC
T ss_pred EeccCC
Confidence 998884
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.76 E-value=0.002 Score=51.49 Aligned_cols=42 Identities=7% Similarity=0.238 Sum_probs=37.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGST 88 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~ 88 (349)
.|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++...
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak 71 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM 71 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH
Confidence 5889999986 9999999999999995 8999999999987544
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.71 E-value=0.0037 Score=50.76 Aligned_cols=71 Identities=20% Similarity=0.156 Sum_probs=48.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEe--c-------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSL--N-------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~--d-------~~~~g~iDvlV 115 (349)
.|.+|+|.|+ |++|...+......|+ +|+++++++++++...+ . +.+...... | .....++|++|
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~---Ga~~~~~~~~~~~~~~i~~~t~g~g~D~vi 99 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q---GFEIADLSLDTPLHEQIAALLGEPEVDCAV 99 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T---TCEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-c---cccEEEeCCCcCHHHHHHHHhCCCCcEEEE
Confidence 5889999986 8999888888877887 78899999888764432 2 112211111 1 22345799999
Q ss_pred ecCcCC
Q 039397 116 NTASLG 121 (349)
Q Consensus 116 nnAg~~ 121 (349)
.+.|..
T Consensus 100 d~vG~~ 105 (195)
T d1kola2 100 DAVGFE 105 (195)
T ss_dssp ECCCTT
T ss_pred ECcccc
Confidence 998853
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.70 E-value=0.0012 Score=51.31 Aligned_cols=44 Identities=14% Similarity=0.207 Sum_probs=38.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhh
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQ 85 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~ 85 (349)
.++.+-|+|.|.||.|-+|..+|+.|.++|++|.+.+|+.....
T Consensus 4 ~~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~ 47 (152)
T d2pv7a2 4 TINSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA 47 (152)
T ss_dssp CSCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred ccCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence 34556679999999999999999999999999999999876544
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.67 E-value=0.0023 Score=50.96 Aligned_cols=70 Identities=14% Similarity=0.138 Sum_probs=49.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEE--Eec--------cccCCCccee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLV--SLN--------NKESKAVDHL 114 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~--~~d--------~~~~g~iDvl 114 (349)
.|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++...+ + +. +..+. ..| ....+++|++
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l--Ga-~~~i~~~~~d~~~~~~~~~~~~~G~d~v 101 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L--GA-TECLNPKDYDKPIYEVICEKTNGGVDYA 101 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T--TC-SEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c--CC-cEEEcCCCchhHHHHHHHHhcCCCCcEE
Confidence 5789999986 8999999999999996 79999999988875443 2 11 11111 111 2233578999
Q ss_pred eecCcC
Q 039397 115 VNTASL 120 (349)
Q Consensus 115 VnnAg~ 120 (349)
|-+.|.
T Consensus 102 id~~g~ 107 (174)
T d1p0fa2 102 VECAGR 107 (174)
T ss_dssp EECSCC
T ss_pred EEcCCC
Confidence 988874
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=96.63 E-value=0.0062 Score=50.59 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=56.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
..+++||+++|-|- |-+|..+|+.|.+.|++|++++.+...++...... ....+.-+.-..-.+|+++-||.-
T Consensus 34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~-----g~~~~~~~~~~~~~cDIl~PcA~~ 106 (230)
T d1leha1 34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE-----GADAVAPNAIYGVTCDIFAPCALG 106 (230)
T ss_dssp SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CCEECCGGGTTTCCCSEEEECSCS
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc-----CCcccCCcccccccccEecccccc
Confidence 56799999999985 88999999999999999999999888877665543 122233333334578999999964
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.55 E-value=0.00087 Score=52.66 Aligned_cols=70 Identities=13% Similarity=0.041 Sum_probs=46.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeE-EEEEeccccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEV-TLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~-~~~~~d~~~~g~iDvlVnnAg 119 (349)
+|+|.|+ |.+|..++..|++.|++|.+++|+++..+.....-....... .....+.+..+..|+++.+.-
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vk 72 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLK 72 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSC
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeec
Confidence 5888888 999999999999999999999999876543221111111111 122223444567888887553
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.43 E-value=0.0043 Score=49.35 Aligned_cols=71 Identities=10% Similarity=0.086 Sum_probs=49.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEE-Eec--------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLV-SLN--------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~-~~d--------~~~~g~iDvlV 115 (349)
.|.+|+|.|+ ||||...++.+...|+ +|+++++++++++. ++++ +...+... ..| ....+++|++|
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a~~~--Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vi 103 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK-AKAL--GATDCLNPRELDKPVQDVITELTAGGVDYSL 103 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT--TCSEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH-HHHh--CCCcccCCccchhhhhhhHhhhhcCCCcEEE
Confidence 5789999975 9999999999999998 68888998887654 3333 11111110 111 22346799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
.++|.
T Consensus 104 e~~G~ 108 (174)
T d1e3ia2 104 DCAGT 108 (174)
T ss_dssp ESSCC
T ss_pred Eeccc
Confidence 99984
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.40 E-value=0.0044 Score=49.15 Aligned_cols=69 Identities=13% Similarity=0.130 Sum_probs=47.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEE-EEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLV-LVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv-~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlV 115 (349)
.|.+|+|.|+ |++|...++.+...|++++ ++++++++++... ++. .. .++..+ ....+++|++|
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~G--a~--~~i~~~~~~~~~~i~~~t~gg~D~vi 101 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLG--AT--HVINSKTQDPVAAIKEITDGGVNFAL 101 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHT--CS--EEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcC--Ce--EEEeCCCcCHHHHHHHHcCCCCcEEE
Confidence 4789999997 8999999999988998654 5677777666543 331 11 122221 11246799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
.+.|.
T Consensus 102 d~~G~ 106 (174)
T d1f8fa2 102 ESTGS 106 (174)
T ss_dssp ECSCC
T ss_pred EcCCc
Confidence 99884
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.38 E-value=0.0062 Score=47.32 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=47.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-------eEEEEecCcc--hhhhHHHHh---cCCCCeEEEE-EeccccCCCcceee
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-------NLVLVARREN--RLQGSTIDE---YNPINEVTLV-SLNNKESKAVDHLV 115 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-------~Vv~~~r~~~--~l~~~~~~~---~~~~~~~~~~-~~d~~~~g~iDvlV 115 (349)
+|.|+||+|.+|.+++..|+..+- .+++.+.++. +++....++ .......... ..+.+.....|++|
T Consensus 5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvVV 84 (154)
T d5mdha1 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAI 84 (154)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceEEE
Confidence 799999999999999999997653 4666665443 333333322 1122112222 22356778899999
Q ss_pred ecCcCCC
Q 039397 116 NTASLGH 122 (349)
Q Consensus 116 nnAg~~~ 122 (349)
..||...
T Consensus 85 itag~~~ 91 (154)
T d5mdha1 85 LVGSMPR 91 (154)
T ss_dssp ECCSCCC
T ss_pred EecccCC
Confidence 9999754
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.36 E-value=0.004 Score=49.27 Aligned_cols=71 Identities=11% Similarity=0.118 Sum_probs=47.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec-------cccCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN-------NKESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-------~~~~g~iDvlVnn 117 (349)
.|++|+|.|+ |++|...++.+...|+ +|+++++++++++...+ . +...+.....| .....++|++|.+
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~--ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~ 107 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L--GADHVVDARRDPVKQVMELTRGRGVNVAMDF 107 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T--TCSEEEETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c--ccceeecCcccHHHHHHHhhCCCCceEEEEe
Confidence 4789999986 9999999999888886 66778888877665443 2 12122111111 1223469999999
Q ss_pred CcC
Q 039397 118 ASL 120 (349)
Q Consensus 118 Ag~ 120 (349)
+|.
T Consensus 108 ~g~ 110 (172)
T d1h2ba2 108 VGS 110 (172)
T ss_dssp SCC
T ss_pred cCc
Confidence 984
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.32 E-value=0.0059 Score=48.24 Aligned_cols=69 Identities=12% Similarity=0.111 Sum_probs=47.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----------cccCCCcce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----------NKESKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----------~~~~g~iDv 113 (349)
.|.+|+|.|+ +|+|...++.+...|+ +|+++++++++++. ..++. ... .+... ....+++|+
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~lG--a~~--~i~~~~~~~~~~~~~~~~~~~g~D~ 101 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEFG--ATE--CINPQDFSKPIQEVLIEMTDGGVDY 101 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHHT--CSE--EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHhC--CcE--EEeCCchhhHHHHHHHHHcCCCCcE
Confidence 5889999998 5999999999999996 56677777777654 33441 111 11111 122467999
Q ss_pred eeecCcC
Q 039397 114 LVNTASL 120 (349)
Q Consensus 114 lVnnAg~ 120 (349)
++.+.|.
T Consensus 102 vid~~G~ 108 (176)
T d2fzwa2 102 SFECIGN 108 (176)
T ss_dssp EEECSCC
T ss_pred eeecCCC
Confidence 9999883
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.26 E-value=0.0032 Score=49.47 Aligned_cols=42 Identities=12% Similarity=0.147 Sum_probs=36.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
.|++|+|.|+ |++|...++.+...|++|+++++++++++...
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~ 68 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR 68 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh
Confidence 4789999886 99999999988889999999999988876543
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=96.25 E-value=0.0048 Score=48.44 Aligned_cols=48 Identities=15% Similarity=0.155 Sum_probs=42.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI 89 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~ 89 (349)
..+++||.++|.|-|.=+|+-++..|.++|++|+++......+.+...
T Consensus 32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~ 79 (166)
T d1b0aa1 32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE 79 (166)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh
Confidence 447899999999999999999999999999999999888776665443
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.04 E-value=0.0043 Score=49.27 Aligned_cols=42 Identities=14% Similarity=0.122 Sum_probs=37.5
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI 89 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~ 89 (349)
.|++.|.|| |.+|.++|..|+++|++|.+.+|++++.+....
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD 42 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 478999998 999999999999999999999999888776554
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.0066 Score=49.04 Aligned_cols=40 Identities=33% Similarity=0.344 Sum_probs=35.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
|+|.|.|| |-+|..+|..++..|++|++.+++++.++...
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~ 44 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK 44 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence 78999998 77999999999999999999999988766543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=95.84 E-value=0.0088 Score=46.76 Aligned_cols=63 Identities=14% Similarity=0.180 Sum_probs=44.1
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
+.|.|+ |-+|..+|+.|.++|++|++.+|+++..+...+.- . ......+.+.....|++|.+.
T Consensus 3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~---~--~~~~~~~~~~~~~~DiIilav 65 (165)
T d2f1ka2 3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ---L--VDEAGQDLSLLQTAKIIFLCT 65 (165)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT---S--CSEEESCGGGGTTCSEEEECS
T ss_pred EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhh---c--cceeeeecccccccccccccC
Confidence 566665 99999999999999999999999987766544321 1 111223345556778887643
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=95.79 E-value=0.0029 Score=47.82 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=34.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
|.++|.|+ |-+|+.+|+.|.++|++|++++.+++..+...
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~ 40 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA 40 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH
Confidence 55777777 78999999999999999999999998877543
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.73 E-value=0.031 Score=39.44 Aligned_cols=71 Identities=7% Similarity=0.044 Sum_probs=47.6
Q ss_pred CCCEEEEeCCCchHH-HHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 46 EDKVVIITGASSDIG-EQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 46 ~~k~vlVTGas~GIG-~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
+.|.+.+.|- +|+| .++|+.|.++|++|...|+......+...+ .+.. .....+.+.....|.+|...++.
T Consensus 7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~---~Gi~-v~~g~~~~~i~~~d~vV~S~AI~ 78 (96)
T d1p3da1 7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ---AGAK-IYIGHAEEHIEGASVVVVSSAIK 78 (96)
T ss_dssp TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH---TTCE-EEESCCGGGGTTCSEEEECTTSC
T ss_pred hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH---CCCe-EEECCccccCCCCCEEEECCCcC
Confidence 4577888876 5555 667999999999999999875443322222 2222 22333345556789999998874
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.65 E-value=0.0048 Score=47.69 Aligned_cols=37 Identities=22% Similarity=0.466 Sum_probs=33.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR 80 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~ 80 (349)
.+++||++||.|| |.+|..-++.|.+.|++|.+++..
T Consensus 9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999999 669999999999999999999754
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.46 E-value=0.0068 Score=48.69 Aligned_cols=40 Identities=23% Similarity=0.361 Sum_probs=35.1
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
|+|.|.|| |-+|..+|..++..|++|++.+++++.++...
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~ 44 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL 44 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence 56888898 88999999999999999999999988766543
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.40 E-value=0.026 Score=44.36 Aligned_cols=46 Identities=11% Similarity=0.171 Sum_probs=41.1
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
.-+++||.++|.|.|.=+|+-++..|+++|++|.++......+.+.
T Consensus 34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~ 79 (170)
T d1a4ia1 34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE 79 (170)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHH
Confidence 4479999999999999999999999999999999999887766543
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.38 E-value=0.025 Score=44.06 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=37.0
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
....+.||+++|.|= |-||+.+|+.+...|++|+++++++-+
T Consensus 18 t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~ 59 (163)
T d1li4a1 18 TDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN 59 (163)
T ss_dssp HCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred hCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence 345689999999996 589999999999999999999998744
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=95.37 E-value=0.021 Score=44.80 Aligned_cols=69 Identities=12% Similarity=0.137 Sum_probs=46.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEec-----------cccCCCcce
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLN-----------NKESKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d-----------~~~~g~iDv 113 (349)
.|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++... ++ +. .+.+... ....+++|+
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~--GA--d~~in~~~~~~~~~~~~~~~~~~G~d~ 101 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF--GA--TDFVNPNDHSEPISQVLSKMTNGGVDF 101 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT--TC--CEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-Hc--CC--cEEEcCCCcchhHHHHHHhhccCCcce
Confidence 5789999986 6788888888888876 7888999988876543 22 11 1222211 122357899
Q ss_pred eeecCcC
Q 039397 114 LVNTASL 120 (349)
Q Consensus 114 lVnnAg~ 120 (349)
++.+.|.
T Consensus 102 vid~~G~ 108 (175)
T d1cdoa2 102 SLECVGN 108 (175)
T ss_dssp EEECSCC
T ss_pred eeeecCC
Confidence 9998884
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.36 E-value=0.0096 Score=46.48 Aligned_cols=42 Identities=19% Similarity=0.174 Sum_probs=36.4
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHH
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGST 88 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~ 88 (349)
.|++++|.|+ |++|...++.+...|++|+++++++++++...
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k 68 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK 68 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh
Confidence 5789999875 99999999999999999999999998877543
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.24 E-value=0.037 Score=44.75 Aligned_cols=77 Identities=16% Similarity=0.145 Sum_probs=58.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEecc-ccCCCcceeeecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNN-KESKAVDHLVNTAS 119 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~-~~~g~iDvlVnnAg 119 (349)
..+++|++||=-|++.|. ++..++.+|+ +|+.++.+++.++...+.+...+....++..|. +..+++|++|.|.-
T Consensus 42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~~~~fD~Vi~nPP 118 (201)
T d1wy7a1 42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPP 118 (201)
T ss_dssp TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCC
T ss_pred cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhhCCcCcEEEEcCc
Confidence 457899999988887662 3334567786 899999999888877777655556777888884 44578999999986
Q ss_pred CC
Q 039397 120 LG 121 (349)
Q Consensus 120 ~~ 121 (349)
..
T Consensus 119 ~~ 120 (201)
T d1wy7a1 119 FG 120 (201)
T ss_dssp CS
T ss_pred cc
Confidence 53
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.10 E-value=0.0084 Score=47.33 Aligned_cols=39 Identities=21% Similarity=0.203 Sum_probs=36.1
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
.+++||.++|.|-|.=+|+=+|..|+++|++|..+..+.
T Consensus 25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~ 63 (171)
T d1edza1 25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 63 (171)
T ss_dssp CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence 389999999999999999999999999999999988654
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.94 E-value=0.033 Score=43.45 Aligned_cols=67 Identities=13% Similarity=0.102 Sum_probs=45.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
|.++|.|. |-||..+|+.|.+.|+ +|++.+|+++.++...+. ...+......+.......|++|.+.
T Consensus 2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~---~~~~~~~~~~~~~~~~~~dlIila~ 70 (171)
T d2g5ca2 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL---GIIDEGTTSIAKVEDFSPDFVMLSS 70 (171)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT---TSCSEEESCGGGGGGTCCSEEEECS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHh---hcchhhhhhhhhhhccccccccccC
Confidence 46888885 9999999999999996 788899998777654432 1111222222233344678888765
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=94.70 E-value=0.031 Score=46.99 Aligned_cols=71 Identities=14% Similarity=-0.001 Sum_probs=53.1
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc---ccCCCcceeeec
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN---KESKAVDHLVNT 117 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~---~~~g~iDvlVnn 117 (349)
...|++||=.|+++|+ ++..+++.|++|+.++.++..++...+.....+....++..|. ...++.|+++.|
T Consensus 118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~~~~~~fD~V~an 191 (254)
T d2nxca1 118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVAN 191 (254)
T ss_dssp CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEE
T ss_pred cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccccccccccchhhhc
Confidence 3468999999999986 3446778899999999999998877766633333455666662 335789999987
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=94.68 E-value=0.037 Score=42.46 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=44.9
Q ss_pred EEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeec
Q 039397 50 VIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNT 117 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnn 117 (349)
+.+.|+ |-+|.++++.|.+.| ++|++.+|++++.+++.++. .+.. ..+.+.....|++|.+
T Consensus 3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~-----~~~~-~~~~~~v~~~Div~la 64 (152)
T d1yqga2 3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL-----GVET-SATLPELHSDDVLILA 64 (152)
T ss_dssp EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT-----CCEE-ESSCCCCCTTSEEEEC
T ss_pred EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc-----cccc-ccccccccccceEEEe
Confidence 556666 999999999999888 99999999999888776653 1222 2333444567888865
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=94.62 E-value=0.031 Score=47.81 Aligned_cols=38 Identities=18% Similarity=0.231 Sum_probs=34.1
Q ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec
Q 039397 41 YSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR 79 (349)
Q Consensus 41 ~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r 79 (349)
+..+++||+++|-|- |-+|..+|+.|.+.|++|+.++-
T Consensus 30 l~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 30 MTPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp CCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence 456899999999996 89999999999999999998764
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=94.29 E-value=0.039 Score=44.46 Aligned_cols=72 Identities=15% Similarity=0.177 Sum_probs=53.9
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc-CCCcceeeecCc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE-SKAVDHLVNTAS 119 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~g~iDvlVnnAg 119 (349)
..+++||+||=-|++.|+ ++..++..|+ +|+.++.+++.++.....+ .++.++.+|..+ .+++|++|.|.-
T Consensus 44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----~~~~~~~~D~~~l~~~fD~Vi~NPP 116 (197)
T d1ne2a_ 44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC----GGVNFMVADVSEISGKYDTWIMNPP 116 (197)
T ss_dssp HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC----TTSEEEECCGGGCCCCEEEEEECCC
T ss_pred cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc----ccccEEEEehhhcCCcceEEEeCcc
Confidence 468999999999998883 4455777886 6999999988776555543 346677888443 578999999865
Q ss_pred C
Q 039397 120 L 120 (349)
Q Consensus 120 ~ 120 (349)
.
T Consensus 117 f 117 (197)
T d1ne2a_ 117 F 117 (197)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.19 E-value=0.047 Score=46.76 Aligned_cols=33 Identities=18% Similarity=0.312 Sum_probs=28.4
Q ss_pred CEEEEeCCC------------------chHHHHHHHHHHHcCCeEEEEecC
Q 039397 48 KVVIITGAS------------------SDIGEQIAYEYAKRKANLVLVARR 80 (349)
Q Consensus 48 k~vlVTGas------------------~GIG~ala~~la~~G~~Vv~~~r~ 80 (349)
|+||||.|. |-.|.++|+.+..+||+|+++.+.
T Consensus 19 k~VLITaG~T~epID~~pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 19 RVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp CEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cEEEEccCCcCcccCCCCceEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence 458898764 689999999999999999999765
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=94.01 E-value=0.032 Score=43.93 Aligned_cols=42 Identities=7% Similarity=0.168 Sum_probs=36.5
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHH
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTID 90 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~ 90 (349)
+.|-|.|- |-+|..+|+.|+++|++|++.+|++++.+++.++
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~ 44 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN 44 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh
Confidence 45667776 8999999999999999999999999998877654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.70 E-value=0.058 Score=39.64 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=33.2
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchh
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL 84 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l 84 (349)
++|+++|.|| |.+|.++|..|+++|.+|.++.+++.-+
T Consensus 29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l 66 (121)
T d1d7ya2 29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLM 66 (121)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccccc
Confidence 3588888886 8999999999999999999999987543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.70 E-value=0.067 Score=39.36 Aligned_cols=37 Identities=22% Similarity=0.307 Sum_probs=32.2
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
-++|.++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus 28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence 35678888876 89999999999999999999988764
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.68 E-value=0.13 Score=44.24 Aligned_cols=70 Identities=24% Similarity=0.225 Sum_probs=49.9
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHh--cCCCCeEEEEEecccc----CCCcceeee
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDE--YNPINEVTLVSLNNKE----SKAVDHLVN 116 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~~~~d~~~----~g~iDvlVn 116 (349)
.++||+||-.|++.|+ ++..+++.|+ +|+.++.++.... ..... ......+.++..|.++ ..++|++|.
T Consensus 33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~-a~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~D~Ivs 108 (311)
T d2fyta1 33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQ-AMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIIS 108 (311)
T ss_dssp GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHH-HHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEE
T ss_pred cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHH-HHHHHHHhCCCccceEEEeeHHHhcCccccceEEEE
Confidence 4689999999999886 6777888997 7999998875432 22222 3445677888877443 357899987
Q ss_pred c
Q 039397 117 T 117 (349)
Q Consensus 117 n 117 (349)
.
T Consensus 109 e 109 (311)
T d2fyta1 109 E 109 (311)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=93.64 E-value=0.041 Score=43.31 Aligned_cols=37 Identities=11% Similarity=0.161 Sum_probs=33.2
Q ss_pred CCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh
Q 039397 55 ASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE 91 (349)
Q Consensus 55 as~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~ 91 (349)
|.|-+|.++|++|+++|++|.+.+|++++.+++.++-
T Consensus 8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~ 44 (178)
T d1pgja2 8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN 44 (178)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence 5689999999999999999999999999988776654
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=93.49 E-value=0.21 Score=41.16 Aligned_cols=81 Identities=15% Similarity=0.110 Sum_probs=49.6
Q ss_pred ccCCCCCCCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCc-----------chhhhHHHHhc--CCCCeEEEEEec
Q 039397 39 NFYSENMEDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRE-----------NRLQGSTIDEY--NPINEVTLVSLN 104 (349)
Q Consensus 39 ~~~~~~l~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~-----------~~l~~~~~~~~--~~~~~~~~~~~d 104 (349)
.+-..+++||+++|-|- |-+|..+|+.|.++ |++|+.++-.. +++.+....-. ..-.....+..+
T Consensus 24 ~~g~~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~~g~i~~~~G~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 102 (239)
T d1gtma1 24 VLGWDTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNITNE 102 (239)
T ss_dssp HTTCSCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECSSCEEEEEEEECHHHHHHHHHHHSSSTTCTTSEEECHH
T ss_pred HhCCCCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccccccceecCCcCCHHHHHHHHHhccccccCCCCeeeccc
Confidence 33345699999999997 66999999999875 99988775332 22222221110 011122334444
Q ss_pred cccCCCcceeeecCcC
Q 039397 105 NKESKAVDHLVNTASL 120 (349)
Q Consensus 105 ~~~~g~iDvlVnnAg~ 120 (349)
.-..-++|+++-||.-
T Consensus 103 ~i~~~~~DIl~PcA~~ 118 (239)
T d1gtma1 103 ELLELEVDVLAPAAIE 118 (239)
T ss_dssp HHHHSCCSEEEECSCS
T ss_pred ccccccccEEeecccc
Confidence 3333478999999964
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=93.48 E-value=0.097 Score=36.20 Aligned_cols=68 Identities=12% Similarity=0.050 Sum_probs=45.5
Q ss_pred EEEEeCCCchHHH-HHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 49 VVIITGASSDIGE-QIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 49 ~vlVTGas~GIG~-ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
++-+.| -+|+|- ++|+.|.++|+.|...|+++.+.-+ .+...+-.+ ...-+.+.....|.+|...++.
T Consensus 3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~~Gi~i-~~gh~~~~i~~~d~vV~SsAI~ 71 (89)
T d1j6ua1 3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRKLGIPI-FVPHSADNWYDPDLVIKTPAVR 71 (89)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHHTTCCE-ESSCCTTSCCCCSEEEECTTCC
T ss_pred EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHHCCCeE-EeeecccccCCCCEEEEecCcC
Confidence 355554 467776 7899999999999999998654332 232223222 2234455566789999999885
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=93.41 E-value=0.032 Score=44.67 Aligned_cols=41 Identities=12% Similarity=0.208 Sum_probs=35.0
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHH
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTI 89 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~ 89 (349)
+++.|.|| |-.|.++|..|++.|++|.+.+|+++..+....
T Consensus 8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~ 48 (189)
T d1n1ea2 8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE 48 (189)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence 46888887 568999999999999999999999887765543
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=93.35 E-value=0.086 Score=45.66 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=67.0
Q ss_pred CCCCCEEEEeCCC-chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEecc--------ccCCCcce
Q 039397 44 NMEDKVVIITGAS-SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNN--------KESKAVDH 113 (349)
Q Consensus 44 ~l~~k~vlVTGas-~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~--------~~~g~iDv 113 (349)
..+|++||=.++. ||++.+ ++..|++|+.++.++..++...+.. .++-.++.++..|. ...++.|+
T Consensus 143 ~~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~ 218 (318)
T d1wxxa2 143 RFRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDL 218 (318)
T ss_dssp GCCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred HhCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCE
Confidence 4578999866665 444433 4456789999999999988877766 34445678888872 33468999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEE
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVN 167 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~i 167 (349)
+|.+.-....+. .+.... ......+.+.++..++ .+|.++..
T Consensus 219 Vi~DpP~~~~~~-------~~~~~~----~~~~~~l~~~a~~lLk-pGG~Lv~~ 260 (318)
T d1wxxa2 219 VVLDPPAFAKGK-------KDVERA----YRAYKEVNLRAIKLLK-EGGILATA 260 (318)
T ss_dssp EEECCCCSCCST-------TSHHHH----HHHHHHHHHHHHHTEE-EEEEEEEE
T ss_pred EEEcCCccccch-------HHHHHH----HHHHHHHHHHHHHHcC-CCCEEEEE
Confidence 999875432211 111111 1233356666666664 45555543
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=93.35 E-value=0.6 Score=37.07 Aligned_cols=140 Identities=7% Similarity=-0.054 Sum_probs=80.4
Q ss_pred CCCCEEEEeC--CCchHHHHHHHHHHHcCCeEEEEecCcchhh-hHHHHhcCCCCeEEEEEeccccCCCcceeeecCcCC
Q 039397 45 MEDKVVIITG--ASSDIGEQIAYEYAKRKANLVLVARRENRLQ-GSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASLG 121 (349)
Q Consensus 45 l~~k~vlVTG--as~GIG~ala~~la~~G~~Vv~~~r~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~~ 121 (349)
..|..+++.. .....+.+++..|.+.|.+|+.+.-+.+... .....+ ...+.++.+|+-.+..
T Consensus 23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~l~~~~--------------~~~~~~~~vv~l~~~~ 88 (209)
T d2fr1a2 23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDARCGRDELAERL--------------RSVGEVAGVLSLLAVD 88 (209)
T ss_dssp CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTTCCHHHHHHHH--------------TTSCCCSEEEECTTTT
T ss_pred CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCccCHHHHHHHh--------------hccCCCCeEEEeCCCC
Confidence 4565555553 3345888999999999999988766543222 222221 2234677788766543
Q ss_pred CCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHhc
Q 039397 122 HTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVENWLPLPRMSLYASAKAALVTFYESLRFELN 201 (349)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~ 201 (349)
....... +. ....+...+.++|++... ....++.+++..+.... +....-+...+++.+|.|+++.|+.
T Consensus 89 ~~~~~~~----~~----~~~~~~~~l~l~qal~~~--~~~~~l~~vT~~a~~~~-~~d~~~~p~~A~l~Gl~r~~~~E~P 157 (209)
T d2fr1a2 89 EAEPEEA----PL----ALASLADTLSLVQAMVSA--ELGCPLWTVTESAVATG-PFERVRNAAHGALWGVGRVIALENP 157 (209)
T ss_dssp CCCCSSC----GG----GCHHHHHHHHHHHHHHHT--TCCCCEEEEEESCSCSS-TTSCCSCGGGHHHHHHHHHHHHHCG
T ss_pred CCCCcch----hH----HHHHHHHHHHHHHHHHhC--CCCCcEEEEEcCCcccC-CCcccCCHhHHhHHHHHHHHHHhCC
Confidence 2221111 11 112345566677776533 12356777765443222 2223334568999999999999987
Q ss_pred CC-eeEEEE
Q 039397 202 DE-VGITIA 209 (349)
Q Consensus 202 ~~-I~v~~v 209 (349)
.. ++...+
T Consensus 158 ~l~~~~vDl 166 (209)
T d2fr1a2 158 AVWGGLVDV 166 (209)
T ss_dssp GGEEEEEEE
T ss_pred CceEEEEEC
Confidence 64 555554
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.33 E-value=0.091 Score=43.32 Aligned_cols=74 Identities=8% Similarity=-0.041 Sum_probs=56.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccc---cCCCcceeeecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNK---ESKAVDHLVNTAS 119 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~---~~g~iDvlVnnAg 119 (349)
...++++||=.|++.|. ++..|+++|.+|+.++.+++-++.+.......+.++.++..|.. ..++.|+++...+
T Consensus 34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~~~~fD~i~~~~~ 110 (246)
T d1y8ca_ 34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLD 110 (246)
T ss_dssp TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTT
T ss_pred hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcccccccccceeee
Confidence 35667899999999885 88899999999999999998877766555444446788887743 3467898886433
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=93.28 E-value=0.17 Score=40.94 Aligned_cols=75 Identities=15% Similarity=0.089 Sum_probs=55.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEeccc----cCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNNK----ESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~~----~~g~iDvlVnnAg~ 120 (349)
.|.+||-.|+++|--.++.-++...+.+|+.++.+++.++.....+ .....++..+..|.. ..+..|+++.+++.
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~fD~I~~~~~~ 154 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGV 154 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBB
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccchhhhhhhccH
Confidence 4779999998888776666666666779999999988887776665 334456677777733 34679999988875
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=93.16 E-value=0.17 Score=41.85 Aligned_cols=36 Identities=31% Similarity=0.442 Sum_probs=32.4
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEec
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVAR 79 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r 79 (349)
.+++||+|+|-| .|-+|..+|+.|.+.|++|+.++-
T Consensus 27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD 62 (242)
T d1v9la1 27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD 62 (242)
T ss_dssp SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence 379999999997 699999999999999999987763
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=93.14 E-value=0.17 Score=38.43 Aligned_cols=53 Identities=9% Similarity=0.123 Sum_probs=40.8
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d 104 (349)
.++|.|. |-+|+.+++.|.++|.+|++++.++++......+.... .+.++..|
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd 57 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGD 57 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESC
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEcc
Confidence 5888888 79999999999999999999999887665555444322 45566666
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=92.95 E-value=0.41 Score=40.13 Aligned_cols=73 Identities=11% Similarity=0.096 Sum_probs=47.9
Q ss_pred CEEEEeCC-CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEec-----cccCCCcceeeecCc
Q 039397 48 KVVIITGA-SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVTLVSLN-----NKESKAVDHLVNTAS 119 (349)
Q Consensus 48 k~vlVTGa-s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d-----~~~~g~iDvlVnnAg 119 (349)
++++-.|+ ||-|+.++++ ...++|+.++.+++.++-...... .......+...| ....+++|++|.|.-
T Consensus 112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~~~~~~~fDlIVsNPP 188 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPP 188 (271)
T ss_dssp CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCC
T ss_pred cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccccccccCcccEEEEccc
Confidence 45554444 4556655543 367899999999998887776662 223345555555 344589999999987
Q ss_pred CCCC
Q 039397 120 LGHT 123 (349)
Q Consensus 120 ~~~~ 123 (349)
....
T Consensus 189 YI~~ 192 (271)
T d1nv8a_ 189 YVKS 192 (271)
T ss_dssp CBCG
T ss_pred ccCc
Confidence 6543
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=92.93 E-value=0.17 Score=40.45 Aligned_cols=43 Identities=19% Similarity=0.193 Sum_probs=37.1
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
....++.||++.|.|- |.||+.+|+.+..-|++|+..++....
T Consensus 36 ~~g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~ 78 (197)
T d1j4aa1 36 TIGREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNP 78 (197)
T ss_dssp CCBCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred CcCccccCCeEEEecc-cccchhHHHhHhhhcccccccCccccc
Confidence 3445789999999996 899999999999999999999876543
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=92.93 E-value=0.045 Score=42.35 Aligned_cols=62 Identities=15% Similarity=0.165 Sum_probs=42.7
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
|-|.| .|-+|..+|+.|+++|++|++.+|++++.++..+.- ........+.....|+++.+.
T Consensus 3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~------~~~~~~~~e~~~~~d~ii~~v 64 (161)
T d1vpda2 3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG------AETASTAKAIAEQCDVIITML 64 (161)
T ss_dssp EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT------CEECSSHHHHHHHCSEEEECC
T ss_pred EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhh------hhhcccHHHHHhCCCeEEEEc
Confidence 45555 489999999999999999999999998877665431 111111122233568888765
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.92 E-value=0.076 Score=38.56 Aligned_cols=36 Identities=17% Similarity=0.327 Sum_probs=32.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
.|.++|.|| |-+|.++|..|++.|.+|.++.|.+.-
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence 478888887 899999999999999999999987653
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=92.74 E-value=0.3 Score=38.33 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=46.6
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcC
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
..+.||++.|.|. |.||+.+++.+..-|++|+..+|+..+.... ....-.+.....|+++.+.-.
T Consensus 38 ~~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~------------~~~~l~ell~~sDiv~~~~pl 102 (181)
T d1qp8a1 38 PLIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGPWR------------FTNSLEEALREARAAVCALPL 102 (181)
T ss_dssp CCCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSSSC------------CBSCSHHHHTTCSEEEECCCC
T ss_pred CcccCceEEEecc-ccccccceeeeecccccccccccccccccee------------eeechhhhhhccchhhccccc
Confidence 3589999999998 5599999999999999999999976432110 001112334567999887643
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=92.70 E-value=0.089 Score=43.04 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=29.9
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
.|.|+|.|| |-.|..+|..|+++|++|.++.|+.
T Consensus 6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 457888887 7889999999999999999999863
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=92.68 E-value=0.12 Score=37.57 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=32.0
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
..|.++|.|| |-||.++|..|++.|.+|.++.|++.
T Consensus 21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence 4578899987 89999999999999999999998764
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.63 E-value=0.075 Score=39.17 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=31.3
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
.|+++|.|| |-||.++|..|++.|.+|.++.|++.
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence 478899997 67999999999999999999999764
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=92.59 E-value=0.095 Score=41.10 Aligned_cols=44 Identities=9% Similarity=-0.049 Sum_probs=37.8
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY 92 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~ 92 (349)
.|++||..|++.| ..+..|+++|++|+.++.++..++...+...
T Consensus 20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~ 63 (201)
T d1pjza_ 20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERG 63 (201)
T ss_dssp TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHC
T ss_pred CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhc
Confidence 6789999999888 4777999999999999999988887766653
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.57 E-value=0.21 Score=40.47 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=56.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEec----cccCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLN----NKESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d----~~~~g~iDvlVnnAg~ 120 (349)
+|.+||..|+++|--.++.-+++ |.+|+.+.++++-.+.....+ ..+..++.++..| ....++.|.++.++++
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD~Iiv~~a~ 155 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAGA 155 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBB
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcceeEEeeccc
Confidence 46789999999888888877776 677999999977666655555 3445678888888 3445789999998886
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 156 ~ 156 (215)
T d1jg1a_ 156 P 156 (215)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.55 E-value=0.16 Score=40.65 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=52.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc----CCCcceeeecCcC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE----SKAVDHLVNTASL 120 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~----~g~iDvlVnnAg~ 120 (349)
+.+||=.|++.|. ++..|++.|++|+.++.+++.++...+...........+..|... .+..|+++.+..+
T Consensus 38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~~~~fD~I~~~~~l 112 (226)
T d1ve3a1 38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSI 112 (226)
T ss_dssp CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCG
T ss_pred CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccccCcCceEEEEecch
Confidence 4579999999886 677889999999999999888776665553333455666677433 3679999987554
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=92.52 E-value=0.26 Score=38.24 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=43.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHc-----CCeEEEEecCcchhhhHHHHh-----cCCCCeEEEEEec-cccCCCcceeeec
Q 039397 49 VVIITGASSDIGEQIAYEYAKR-----KANLVLVARRENRLQGSTIDE-----YNPINEVTLVSLN-NKESKAVDHLVNT 117 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~-----G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~~~~d-~~~~g~iDvlVnn 117 (349)
++.|.||++.-...+...++.+ +.++++.|.++++++....++ ............| .+....-|++|+.
T Consensus 5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vvit 84 (167)
T d1u8xx1 5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMAH 84 (167)
T ss_dssp EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEEEC
T ss_pred eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEEEC
Confidence 4666677553332333333332 358999999999887544433 1122222333445 3556788999999
Q ss_pred CcCCC
Q 039397 118 ASLGH 122 (349)
Q Consensus 118 Ag~~~ 122 (349)
||...
T Consensus 85 ag~~~ 89 (167)
T d1u8xx1 85 IRVGK 89 (167)
T ss_dssp CCTTH
T ss_pred CCcCC
Confidence 99753
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.46 E-value=0.22 Score=40.52 Aligned_cols=72 Identities=14% Similarity=0.057 Sum_probs=50.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC------------------CCCeEEEEEecc--
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN------------------PINEVTLVSLNN-- 105 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~------------------~~~~~~~~~~d~-- 105 (349)
.+++||.-|++.| ..+..|+++|++|+.++-++..++...+.... ....+.++.+|.
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 121 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD 121 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence 5789999999887 56889999999999999999887765544311 223556666662
Q ss_pred ---ccCCCcceeeecCcC
Q 039397 106 ---KESKAVDHLVNTASL 120 (349)
Q Consensus 106 ---~~~g~iDvlVnnAg~ 120 (349)
...+..|+++.....
T Consensus 122 l~~~~~~~fd~i~~~~~l 139 (229)
T d2bzga1 122 LPRTNIGKFDMIWDRGAL 139 (229)
T ss_dssp GGGSCCCCEEEEEESSST
T ss_pred ccccccCceeEEEEEEEE
Confidence 334566776655443
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=92.41 E-value=0.086 Score=38.43 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=31.4
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
.|+++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence 578888887 89999999999999999999999754
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.38 E-value=0.39 Score=41.34 Aligned_cols=107 Identities=10% Similarity=0.086 Sum_probs=66.9
Q ss_pred CCCEEEEeCCC-chHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHh-cCC-CCeEEEEEecc--------ccCCCcce
Q 039397 46 EDKVVIITGAS-SDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDE-YNP-INEVTLVSLNN--------KESKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGas-~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~-~~~-~~~~~~~~~d~--------~~~g~iDv 113 (349)
+|++||=.|+. |+++.+ ++..|+ +|+.++.+++.++...+.. .++ ...+.++..|. ...++.|+
T Consensus 145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~ 220 (324)
T d2as0a2 145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI 220 (324)
T ss_dssp TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence 47888877765 555554 345676 7999999999888777666 222 24677777772 24568999
Q ss_pred eeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEe
Q 039397 114 LVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNA 168 (349)
Q Consensus 114 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~is 168 (349)
+|.+.-..... ..+... .......+.+.+++.++ .+|.++..|
T Consensus 221 Vi~DpP~~~~~-------~~~~~~----~~~~y~~l~~~a~~ll~-pGG~lv~~s 263 (324)
T d2as0a2 221 VVLDPPAFVQH-------EKDLKA----GLRAYFNVNFAGLNLVK-DGGILVTCS 263 (324)
T ss_dssp EEECCCCSCSS-------GGGHHH----HHHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred hhcCCccccCC-------HHHHHH----HHHHHHHHHHHHHHHcC-CCcEEEEEe
Confidence 99987543211 111122 22345557777777774 455555554
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.27 E-value=0.086 Score=38.63 Aligned_cols=35 Identities=26% Similarity=0.272 Sum_probs=31.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
+|.++|.|| |-+|.++|..|++.|.+|.++.|++.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 467888886 89999999999999999999998764
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.26 E-value=0.078 Score=40.98 Aligned_cols=64 Identities=11% Similarity=0.147 Sum_probs=43.3
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
+|-+.| .|-+|.++|+.|+++|++|.+.+|+.++.+.....- ........+.....|+++.+..
T Consensus 3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~------~~~~~~~~e~~~~~diii~~v~ 66 (162)
T d3cuma2 3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG------ASAARSARDAVQGADVVISMLP 66 (162)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT------CEECSSHHHHHTSCSEEEECCS
T ss_pred EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhh------ccccchhhhhccccCeeeeccc
Confidence 455565 589999999999999999999999988776554321 1111111233445688777653
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=92.25 E-value=0.1 Score=41.42 Aligned_cols=72 Identities=15% Similarity=0.052 Sum_probs=49.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCcC
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTASL 120 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg~ 120 (349)
..++.++++.|.|. |.||+++++.+..-|.+|+..+|........... .........+.+...|+++.+.-.
T Consensus 39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~------~~~~~~~l~~~l~~sD~v~~~~pl 110 (188)
T d2naca1 39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL------NLTWHATREDMYPVCDVVTLNCPL 110 (188)
T ss_dssp CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH------TCEECSSHHHHGGGCSEEEECSCC
T ss_pred ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccc------cccccCCHHHHHHhccchhhcccc
Confidence 45789999999995 8899999999999999999999875432221111 011111113344567888877654
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=92.18 E-value=0.27 Score=39.28 Aligned_cols=43 Identities=14% Similarity=0.227 Sum_probs=37.2
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
+...++.||++.|.|. |.||+++|+.+..-|++|+..++....
T Consensus 38 ~~~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~ 80 (199)
T d1dxya1 38 FIGKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMK 80 (199)
T ss_dssp CCCCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred cccccccceeeeeeec-ccccccccccccccceeeeccCCccch
Confidence 3456889999999996 789999999999999999999987543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=92.12 E-value=0.099 Score=37.92 Aligned_cols=35 Identities=20% Similarity=0.140 Sum_probs=30.6
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
|+++|.|| |-+|.++|..|.+.|.+|.++.|.+.-
T Consensus 22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence 67778776 899999999999999999999997643
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.03 E-value=0.14 Score=39.04 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=29.7
Q ss_pred CCEEEE-eCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 47 DKVVII-TGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 47 ~k~vlV-TGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
++.++| -.+++.||.++|..|+++|++|.++.+...
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 455555 456699999999999999999999998754
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=91.99 E-value=0.078 Score=44.18 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=29.6
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
+|+|+|.|| |--|...|.+|+++|++|.++.++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 588999987 6668999999999999999998754
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=91.87 E-value=0.14 Score=36.94 Aligned_cols=35 Identities=26% Similarity=0.456 Sum_probs=30.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
.|+++|.|| |-+|.++|..|++.|++|.++.|.+.
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence 477888876 89999999999999999999998754
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.86 E-value=0.38 Score=37.80 Aligned_cols=72 Identities=19% Similarity=0.207 Sum_probs=49.6
Q ss_pred cCCCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 40 FYSENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 40 ~~~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
+...++.||++.|.|. |.||+++++.+..-|++|+..++...+....... +..... .+.....|+++.+.-
T Consensus 37 ~~~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~-------~~~~~l-~ell~~sDiv~~~~P 107 (184)
T d1ygya1 37 FSGTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLG-------IELLSL-DDLLARADFISVHLP 107 (184)
T ss_dssp CCBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHT-------CEECCH-HHHHHHCSEEEECCC
T ss_pred cccccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhcC-------ceeccH-HHHHhhCCEEEEcCC
Confidence 4455789999999995 9999999999999999999999876543322211 111111 222345688887765
Q ss_pred C
Q 039397 120 L 120 (349)
Q Consensus 120 ~ 120 (349)
.
T Consensus 108 l 108 (184)
T d1ygya1 108 K 108 (184)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=91.85 E-value=0.15 Score=37.02 Aligned_cols=38 Identities=16% Similarity=0.237 Sum_probs=33.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
..+|.++|.|| |-||.++|..|++.|.+|.++.|.+.-
T Consensus 20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPL 57 (121)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchh
Confidence 35789999886 899999999999999999999997643
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.80 E-value=0.13 Score=39.01 Aligned_cols=67 Identities=19% Similarity=0.167 Sum_probs=44.2
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC---eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA---NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~---~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
.|.|.||||-.|+++.+.|.++++ ++..++.+....+. +.....+......+...+..+|+++.+++
T Consensus 4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~----i~~~~~~~~~~~~~~~~~~~~d~vf~a~p 73 (144)
T d2hjsa1 4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR----MGFAESSLRVGDVDSFDFSSVGLAFFAAA 73 (144)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE----EEETTEEEECEEGGGCCGGGCSEEEECSC
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcc----eeeccccchhccchhhhhccceEEEecCC
Confidence 588999999999999999987654 67766655433332 11222334444445566667888887664
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.67 E-value=0.16 Score=37.16 Aligned_cols=36 Identities=19% Similarity=0.287 Sum_probs=31.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
.|.++|.|| |-||.++|..|++.|++|.++.|++.-
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence 478888886 899999999999999999999987643
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=91.67 E-value=0.12 Score=40.72 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=32.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
-++|.|+|.|| |-.|.+.|..|+++|++|.+..++.
T Consensus 41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence 45789999997 7789999999999999999999875
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=91.61 E-value=0.34 Score=39.45 Aligned_cols=71 Identities=18% Similarity=0.091 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecc----ccCCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNN----KESKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~----~~~g~iDvlVnnAg~ 120 (349)
.|.+||-.|+++|--. ..|++.+.+|+.++++++..+...+.... ..++.++..|. ...++.|.++.+++.
T Consensus 70 ~g~~VLdIG~GsGy~t---a~La~l~~~V~aiE~~~~~~~~A~~~~~~-~~nv~~~~~d~~~g~~~~~pfD~Iiv~~a~ 144 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYT---ALIAEIVDKVVSVEINEKMYNYASKLLSY-YNNIKLILGDGTLGYEEEKPYDRVVVWATA 144 (224)
T ss_dssp TTCEEEEECCTTSHHH---HHHHHHSSEEEEEESCHHHHHHHHHHHTT-CSSEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred ccceEEEecCCCCHHH---HHHHHHhcccccccccHHHHHHHHHHHhc-ccccccccCchhhcchhhhhHHHHHhhcch
Confidence 4679999999988543 45667788999999988777766554443 35788888873 345789999988875
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=91.51 E-value=0.29 Score=40.76 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=32.8
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEe
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVA 78 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~ 78 (349)
..+++||+++|.| .|-+|..+|+.|.+.|++|+.++
T Consensus 31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 4589999999999 69999999999999999998775
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=91.50 E-value=0.35 Score=37.57 Aligned_cols=72 Identities=19% Similarity=0.228 Sum_probs=43.9
Q ss_pred EEEEeCCCchHH--HHHHHHHHHc----CCeEEEEecCcchhhhHHHHh----cCCCCeEEEEE-ec-cccCCCcceeee
Q 039397 49 VVIITGASSDIG--EQIAYEYAKR----KANLVLVARRENRLQGSTIDE----YNPINEVTLVS-LN-NKESKAVDHLVN 116 (349)
Q Consensus 49 ~vlVTGas~GIG--~ala~~la~~----G~~Vv~~~r~~~~l~~~~~~~----~~~~~~~~~~~-~d-~~~~g~iDvlVn 116 (349)
++.|.|| |.+| .++...++.. +.++++.|+++++++....++ ........... .| .+.....|++|+
T Consensus 4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv~ 82 (171)
T d1obba1 4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVIN 82 (171)
T ss_dssp EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEE
T ss_pred EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEee
Confidence 4666675 4444 4455555543 469999999998877654433 11122233333 23 445677899999
Q ss_pred cCcCC
Q 039397 117 TASLG 121 (349)
Q Consensus 117 nAg~~ 121 (349)
.++..
T Consensus 83 ~~~~g 87 (171)
T d1obba1 83 TAMVG 87 (171)
T ss_dssp CCCTT
T ss_pred ecccc
Confidence 98875
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=91.49 E-value=0.44 Score=37.53 Aligned_cols=73 Identities=5% Similarity=0.034 Sum_probs=51.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEecccc---CCCcceeeecCcC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNNKE---SKAVDHLVNTASL 120 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~~~---~g~iDvlVnnAg~ 120 (349)
+++++||=.|++.|. .+..|+++|++|+.++.+++.++...... ..+...+.+...|... .+..|+++.+.-+
T Consensus 29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~fD~I~~~~~~ 105 (198)
T d2i6ga1 29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTFDGEYDFILSTVVM 105 (198)
T ss_dssp SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCCCCCEEEEEEESCG
T ss_pred CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccccccccEEEEeeee
Confidence 456689999986553 56788899999999999998887665444 2333456666667433 3678999876643
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=91.39 E-value=0.31 Score=40.00 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=31.5
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHH-cCCeEEEEe
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAK-RKANLVLVA 78 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~-~G~~Vv~~~ 78 (349)
..+++||+++|-| .|-+|..+|+.|.+ .|++|+.++
T Consensus 26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 4578999999987 79999999999985 599999876
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=91.21 E-value=0.098 Score=39.96 Aligned_cols=63 Identities=11% Similarity=0.076 Sum_probs=43.4
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
+.+. |.|-+|.++++.|.+.|++|++.+|+.++.++..++.... ...-..+....-|+++.+.
T Consensus 3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~-----~~~~~~~~~~~~dvIilav 65 (152)
T d2ahra2 3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALP-----YAMSHQDLIDQVDLVILGI 65 (152)
T ss_dssp EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCC-----BCSSHHHHHHTCSEEEECS
T ss_pred EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccccee-----eechhhhhhhccceeeeec
Confidence 4444 5689999999999999999999999998888776654211 1111112223568888654
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=91.20 E-value=0.2 Score=39.85 Aligned_cols=41 Identities=12% Similarity=0.184 Sum_probs=36.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
..++.||++.|.|. |.||+.+|+.+..-|++|+..++....
T Consensus 44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~ 84 (193)
T d1mx3a1 44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD 84 (193)
T ss_dssp CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcccc
Confidence 45789999999986 899999999999999999999987553
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=91.20 E-value=0.11 Score=38.15 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=32.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchh
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRL 84 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l 84 (349)
.|.++|.|| |-||.++|..|.+.|.+|.++.|++.-+
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l 61 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIV 61 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccC
Confidence 478889887 8999999999999999999999986543
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.20 E-value=0.1 Score=41.02 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=30.1
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCe-EEEEecCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKAN-LVLVARREN 82 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~-Vv~~~r~~~ 82 (349)
+|+|+|.|| |-.|...|..|+++|++ |.+..|+..
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 578888887 88899999999999995 989988753
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.18 E-value=0.17 Score=37.56 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=32.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
.+|+++|.|| |-+|.++|..|++.|.+|.++.+...-
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence 4688888876 899999999999999999999987644
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=91.07 E-value=0.29 Score=39.94 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=52.3
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEecccc---CCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKE---SKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~---~g~iDvlVnn 117 (349)
++|+||=.|++.| .++..|+++|++|+.++.+++-++...+.......++.+...|.+. .+..|.++..
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~~~~fD~I~~~ 112 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMF 112 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEEC
T ss_pred CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcccccccchHhhh
Confidence 5679999999887 5567899999999999999887776666654444467788888443 3578988775
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.71 E-value=0.18 Score=36.86 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=29.7
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
.|.++|.|| |-||.++|..|.+.|.+|.++.|+.
T Consensus 20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~ 53 (122)
T d1h6va2 20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI 53 (122)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence 356788886 8999999999999999999998863
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.21 E-value=0.51 Score=40.36 Aligned_cols=69 Identities=20% Similarity=0.180 Sum_probs=47.8
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHh--cCCCCeEEEEEecccc----CCCcceeeec
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDE--YNPINEVTLVSLNNKE----SKAVDHLVNT 117 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~~~~d~~~----~g~iDvlVnn 117 (349)
.+||+||-.|++.|+ ++..++++|+ +|+.++.++. .....+.. ......+.++..|..+ .+++|+++..
T Consensus 32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~~~~~~D~ivs~ 107 (316)
T d1oria_ 32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISE 107 (316)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEEC
T ss_pred CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcccccceeEEEeee
Confidence 478999999999885 5677888896 6999997754 33332222 3334568888877433 3578999875
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.93 E-value=1.6 Score=37.11 Aligned_cols=70 Identities=7% Similarity=0.004 Sum_probs=48.4
Q ss_pred CCCEEEEeCC-CchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh--c-CCCCeEEEEEecc--------ccCCCcce
Q 039397 46 EDKVVIITGA-SSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE--Y-NPINEVTLVSLNN--------KESKAVDH 113 (349)
Q Consensus 46 ~~k~vlVTGa-s~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~--~-~~~~~~~~~~~d~--------~~~g~iDv 113 (349)
++++||=..+ +|+++.+ ++..|++|+.++.++..++...+.. . .....+.++..|. ....+.|+
T Consensus 132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~~l~~~~~~~~~fD~ 207 (309)
T d2igta1 132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDI 207 (309)
T ss_dssp SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSE
T ss_pred CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHHhHHHHhhcCCCCCE
Confidence 5778875544 4555444 4567999999999998888776655 2 2233578888882 33468999
Q ss_pred eeecCc
Q 039397 114 LVNTAS 119 (349)
Q Consensus 114 lVnnAg 119 (349)
+|.+.-
T Consensus 208 IilDPP 213 (309)
T d2igta1 208 ILTDPP 213 (309)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999853
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.92 E-value=0.11 Score=46.93 Aligned_cols=36 Identities=14% Similarity=0.265 Sum_probs=31.0
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
+++.+|||.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~ 71 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT 71 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34668999998 7899999999999997 899998763
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=89.90 E-value=0.5 Score=37.87 Aligned_cols=72 Identities=13% Similarity=0.032 Sum_probs=52.8
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEecccc----CCCcceeeecCcCC
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNNKE----SKAVDHLVNTASLG 121 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~~~----~g~iDvlVnnAg~~ 121 (349)
+++||=.|++.|.- +..++++|++|+.++-+++-++...+.+ .....++.++..|.+. .+..|+++.+..+.
T Consensus 16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~~~~~fD~v~~~~~l~ 92 (231)
T d1vl5a_ 16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAH 92 (231)
T ss_dssp CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 57899999988843 4667889999999999988777655544 3344567888888443 46799998877653
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=89.77 E-value=0.33 Score=37.54 Aligned_cols=73 Identities=18% Similarity=0.128 Sum_probs=54.3
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec----cccCCCcceeeecCcC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN----NKESKAVDHLVNTASL 120 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d----~~~~g~iDvlVnnAg~ 120 (349)
.+..+|+|.|| |=.|+.-++.....|++|.+.|.+.++++++...... .+.....+ .+....-|++|..+-+
T Consensus 30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~~~~~~~~~l~~~~~~aDivI~aali 105 (168)
T d1pjca1 30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVELLYSNSAEIETAVAEADLLIGAVLV 105 (168)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cceeehhhhhhHHHhhccCcEEEEeeec
Confidence 34578999997 6789999999999999999999999998877665422 23333332 3344567999998876
Q ss_pred C
Q 039397 121 G 121 (349)
Q Consensus 121 ~ 121 (349)
.
T Consensus 106 p 106 (168)
T d1pjca1 106 P 106 (168)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=89.76 E-value=0.15 Score=42.40 Aligned_cols=31 Identities=32% Similarity=0.467 Sum_probs=28.0
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
|+|.|| |-.|..+|.+|+++|.+|++++++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 777776 8899999999999999999999864
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.72 E-value=0.14 Score=41.05 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=31.3
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGS 87 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~ 87 (349)
+.|. |.|-+|..+|..|+++|++|++.|.+++..+.+
T Consensus 3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l 39 (202)
T d1mv8a2 3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI 39 (202)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence 5555 569999999999999999999999988776544
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=89.71 E-value=0.28 Score=35.93 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=31.9
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
..|.++|.|| |-||.++|..|.+.|.+|.++.+.+.
T Consensus 25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 3578999987 89999999999999999999988753
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=89.50 E-value=0.2 Score=38.00 Aligned_cols=69 Identities=12% Similarity=0.133 Sum_probs=41.7
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC----CeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK----ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G----~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
|.|.|.||||-.|+.+.+.|.++. .+++..+++.......... .. ........|...+..+|+++.+++
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~--~~-~~~~~~~~~~~~~~~~DivF~a~~ 74 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG--GT-TGTLQDAFDLEALKALDIIVTCQG 74 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG--TC-CCBCEETTCHHHHHTCSEEEECSC
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc--CC-ceeeecccchhhhhcCcEEEEecC
Confidence 468888999999999999888764 3677776654433221111 01 111111123334567899998875
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=89.49 E-value=0.82 Score=35.56 Aligned_cols=71 Identities=17% Similarity=0.218 Sum_probs=52.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC-C-CCeEEEEEecc----ccCCCcceeeecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN-P-INEVTLVSLNN----KESKAVDHLVNTAS 119 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~-~-~~~~~~~~~d~----~~~g~iDvlVnnAg 119 (349)
+|.+||=.|++.| .++..+++.+.+|+.++.+++.++...+.+.. + ..++.++.+|. ......|.++.+.+
T Consensus 33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D~v~~~~~ 109 (186)
T d1l3ia_ 33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGS 109 (186)
T ss_dssp TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCC
T ss_pred CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcCEEEEeCc
Confidence 5778998888877 34456677889999999999988877776622 2 24788888883 34468899987643
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.44 E-value=0.73 Score=35.49 Aligned_cols=74 Identities=16% Similarity=0.118 Sum_probs=43.0
Q ss_pred EEEEeCC-CchHHHHHHHHHHHc----CCeEEEEecCcch--hhhHHH---H-h-cCCCCeEEEEEec-cccCCCcceee
Q 039397 49 VVIITGA-SSDIGEQIAYEYAKR----KANLVLVARRENR--LQGSTI---D-E-YNPINEVTLVSLN-NKESKAVDHLV 115 (349)
Q Consensus 49 ~vlVTGa-s~GIG~ala~~la~~----G~~Vv~~~r~~~~--l~~~~~---~-~-~~~~~~~~~~~~d-~~~~g~iDvlV 115 (349)
++.|.|| |.|.+..++..+... +.++++.|.++++ ++.... . . ............| .+....-|++|
T Consensus 3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvVv 82 (169)
T d1s6ya1 3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVT 82 (169)
T ss_dssp EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEEE
Confidence 3556665 567777777766653 2499999998854 332221 1 1 1112222223334 34445679999
Q ss_pred ecCcCCC
Q 039397 116 NTASLGH 122 (349)
Q Consensus 116 nnAg~~~ 122 (349)
+.||+..
T Consensus 83 ~ta~~~~ 89 (169)
T d1s6ya1 83 TQFRVGG 89 (169)
T ss_dssp ECCCTTH
T ss_pred EccccCC
Confidence 9999863
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=89.26 E-value=0.32 Score=38.54 Aligned_cols=41 Identities=17% Similarity=0.255 Sum_probs=36.0
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
..++.||++.|.|. |.||+++|+.+..-|.+|+..++....
T Consensus 42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~ 82 (191)
T d1gdha1 42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS 82 (191)
T ss_dssp BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred cceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence 45778999999986 899999999999999999999986554
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=89.24 E-value=0.22 Score=37.77 Aligned_cols=62 Identities=10% Similarity=0.115 Sum_probs=40.3
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
+-|.| .|-+|.++|+.|.++|++|++.+++.++......+-. .+ ...-.+.....|++|.+.
T Consensus 3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~----~~--~~~~~e~~~~~diIi~~v 64 (152)
T d1i36a2 3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTV----GV--TETSEEDVYSCPVVISAV 64 (152)
T ss_dssp EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHH----TC--EECCHHHHHTSSEEEECS
T ss_pred EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcc----cc--cccHHHHHhhcCeEEEEe
Confidence 44454 5999999999999999999999988766544332211 11 111122334578888764
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=89.21 E-value=0.47 Score=36.40 Aligned_cols=41 Identities=20% Similarity=0.203 Sum_probs=36.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
...+.||+++|.|= |-+|+.+|+++...|++|+++..++-+
T Consensus 18 ~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~ 58 (163)
T d1v8ba1 18 DFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC 58 (163)
T ss_dssp CCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred CceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence 34578999999985 889999999999999999999998744
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=89.06 E-value=0.36 Score=36.16 Aligned_cols=38 Identities=13% Similarity=0.090 Sum_probs=33.1
Q ss_pred CCCEEEEeCCC---chHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 46 EDKVVIITGAS---SDIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 46 ~~k~vlVTGas---~GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
+-|++.|.||| +..|..+++.|.+.|++|+.+..+.++
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~ 58 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE 58 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc
Confidence 35899999999 679999999999999999999876544
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=89.05 E-value=0.25 Score=40.38 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=30.0
Q ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 47 DKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 47 ~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
.++|+|.|| |--|..+|..|+++|++|+++.|+.+
T Consensus 4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 467899997 66788999999999999999998754
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.89 E-value=0.51 Score=38.25 Aligned_cols=75 Identities=15% Similarity=0.081 Sum_probs=56.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcC------CCCeEEEEEec----cccCCCcceee
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYN------PINEVTLVSLN----NKESKAVDHLV 115 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~~~~d----~~~~g~iDvlV 115 (349)
+|.+||-.|+++|--.++.-++.....+|+.++++++-++...+.+.. ....+.....| ....+..|.++
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~~~fD~I~ 155 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 155 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccchhhhhhhhh
Confidence 478999999999988888888888899999999998877665544411 12356666666 23456799999
Q ss_pred ecCcC
Q 039397 116 NTASL 120 (349)
Q Consensus 116 nnAg~ 120 (349)
.+++.
T Consensus 156 ~~~~~ 160 (224)
T d1i1na_ 156 VGAAA 160 (224)
T ss_dssp ECSBB
T ss_pred hhcch
Confidence 98875
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=88.85 E-value=0.57 Score=35.35 Aligned_cols=72 Identities=17% Similarity=0.069 Sum_probs=50.7
Q ss_pred CCCCCCEEEEeCCCch-HHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhc--CCCCeEEEEEecc-----ccCCCcce
Q 039397 43 ENMEDKVVIITGASSD-IGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEY--NPINEVTLVSLNN-----KESKAVDH 113 (349)
Q Consensus 43 ~~l~~k~vlVTGas~G-IG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d~-----~~~g~iDv 113 (349)
.+++|++||=.|++.| +|. +.+.+|+ +|+.++.+.+..+...+.+. .....+.++..|. ...++.|+
T Consensus 11 ~~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~~l~~~~~~fDi 86 (152)
T d2esra1 11 PYFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDL 86 (152)
T ss_dssp SCCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEE
T ss_pred hhCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccccccccccccce
Confidence 3578999986666544 554 4567886 89999999888776666552 2334588888882 33567899
Q ss_pred eeecC
Q 039397 114 LVNTA 118 (349)
Q Consensus 114 lVnnA 118 (349)
++.+.
T Consensus 87 If~DP 91 (152)
T d2esra1 87 VFLDP 91 (152)
T ss_dssp EEECC
T ss_pred eEech
Confidence 98764
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=88.83 E-value=0.26 Score=37.66 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=30.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC--eEEEEecCc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA--NLVLVARRE 81 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~--~Vv~~~r~~ 81 (349)
.||+|+|.|| |-+|..+|..|.+.|. +|+++.+++
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4899999998 6779999999999985 788888765
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=88.73 E-value=0.1 Score=41.68 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=28.5
Q ss_pred CEEEEeCCCchHHH-----HHHHHHHHcCCeEEEEec
Q 039397 48 KVVIITGASSDIGE-----QIAYEYAKRKANLVLVAR 79 (349)
Q Consensus 48 k~vlVTGas~GIG~-----ala~~la~~G~~Vv~~~r 79 (349)
|+.+|||.+.|.|+ .+|+.|+++|++|.+++-
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 78999999989987 678999999999999863
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.53 E-value=0.48 Score=34.17 Aligned_cols=59 Identities=17% Similarity=0.226 Sum_probs=41.2
Q ss_pred CEEEEeCCC---chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeec
Q 039397 48 KVVIITGAS---SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNT 117 (349)
Q Consensus 48 k~vlVTGas---~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnn 117 (349)
|++.|.|+| +-.|..+.+.|.+.|++|+.+..+.++.. .........+-...+|+++-.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~-----------G~~~y~sl~~lp~~~D~vvi~ 63 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE-----------GLKCYRSVRELPKDVDVIVFV 63 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET-----------TEECBSSGGGSCTTCCEEEEC
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccccc-----------CccccccchhccccceEEEEE
Confidence 789999999 56999999999999999998876544322 122222223344567877654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=88.20 E-value=0.29 Score=41.95 Aligned_cols=36 Identities=22% Similarity=0.430 Sum_probs=30.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
+.|.|+|.|| |--|..+|..|+++|++|.++.++..
T Consensus 1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 4688999997 66789999999999999999987653
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=88.15 E-value=0.26 Score=41.45 Aligned_cols=36 Identities=28% Similarity=0.328 Sum_probs=30.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
-+.|+|+|.|| |--|...|..|+++|++|.++.++.
T Consensus 28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 35688999997 5669999999999999999998754
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=88.06 E-value=0.42 Score=38.71 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=32.4
Q ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 44 NMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 44 ~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
.-.+|.|+|.|| |-.|...|..|+++|++|.++.++.+
T Consensus 46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 346789999998 66699999999999999999987653
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=87.88 E-value=0.44 Score=37.72 Aligned_cols=73 Identities=10% Similarity=0.040 Sum_probs=56.3
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec---------cccCCCcceeeecC
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN---------NKESKAVDHLVNTA 118 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d---------~~~~g~iDvlVnnA 118 (349)
..+=+|-|+||..+++.+.+ . +.+|+.+|++++.++.....+......+.++..+ ....+++|.++...
T Consensus 26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~Dl 103 (192)
T d1m6ya2 26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDL 103 (192)
T ss_dssp EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeecc
Confidence 33447899999999999887 3 5799999999999888777665555667777765 22247899999999
Q ss_pred cCCC
Q 039397 119 SLGH 122 (349)
Q Consensus 119 g~~~ 122 (349)
|++.
T Consensus 104 GvSs 107 (192)
T d1m6ya2 104 GVST 107 (192)
T ss_dssp SCCH
T ss_pred chhH
Confidence 9853
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=87.17 E-value=0.41 Score=37.73 Aligned_cols=40 Identities=18% Similarity=0.112 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
..++.+|++.|.| -|.||+.+|+.+..-|++|+..++...
T Consensus 39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 78 (188)
T d1sc6a1 39 SFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK 78 (188)
T ss_dssp CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccccceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence 4578999999996 489999999999999999999998654
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=87.06 E-value=0.32 Score=41.36 Aligned_cols=32 Identities=9% Similarity=0.195 Sum_probs=23.8
Q ss_pred CEEEEeCCCchHHH-----HHHHHHHHcCCeEEEEecC
Q 039397 48 KVVIITGASSDIGE-----QIAYEYAKRKANLVLVARR 80 (349)
Q Consensus 48 k~vlVTGas~GIG~-----ala~~la~~G~~Vv~~~r~ 80 (349)
|+|+|++|+.| |. +++++|.++|++|..++..
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 56666665444 54 6899999999999887643
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.01 E-value=1.2 Score=34.87 Aligned_cols=73 Identities=7% Similarity=0.098 Sum_probs=51.7
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh---cCCCCeEEEEEeccc---cCCCcceeeecC
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE---YNPINEVTLVSLNNK---ESKAVDHLVNTA 118 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~---~~~~~~~~~~~~d~~---~~g~iDvlVnnA 118 (349)
..+++||=.|++.| .++..+++.+.+|++++.++...+.....+ ......+.+...|.. ..+..|+++.|.
T Consensus 51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~~~~fD~Ii~~~ 127 (194)
T d1dusa_ 51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNP 127 (194)
T ss_dssp CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECC
T ss_pred CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhccCCceEEEEcc
Confidence 35788998888776 345567778999999999988777665544 222345777777742 245799999886
Q ss_pred cC
Q 039397 119 SL 120 (349)
Q Consensus 119 g~ 120 (349)
-.
T Consensus 128 p~ 129 (194)
T d1dusa_ 128 PI 129 (194)
T ss_dssp CS
T ss_pred cE
Confidence 43
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=86.96 E-value=1.5 Score=37.34 Aligned_cols=109 Identities=15% Similarity=0.005 Sum_probs=63.8
Q ss_pred CCCEEEEeCC-CchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhc-CC--CCeEEEEEecc--------ccCCCcc
Q 039397 46 EDKVVIITGA-SSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEY-NP--INEVTLVSLNN--------KESKAVD 112 (349)
Q Consensus 46 ~~k~vlVTGa-s~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~-~~--~~~~~~~~~d~--------~~~g~iD 112 (349)
+|++||=..+ +||++.+ .+..|+ .|+.++.++..++...+... ++ ..++.++..|. .+..+.|
T Consensus 144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~~fD 219 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYD 219 (317)
T ss_dssp BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcCCCC
Confidence 5888885554 4555543 455787 69999999988887766652 22 24678888882 3456899
Q ss_pred eeeecCcCCCCccccccCCcchHHHHHHhHhhhhHHHHHHhccccccCCCeEEEEeccc
Q 039397 113 HLVNTASLGHTFFFEEVTDTSIFPRLLDINFWGNVYPTFVALPYLHESNGRVVVNASVE 171 (349)
Q Consensus 113 vlVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~g~IV~isS~~ 171 (349)
++|.+.-.....+- . ..... .....+.+.+++.++. +| ++.++|.+
T Consensus 220 ~Ii~DPP~f~~~~~-~---~~~~~-------~~~~~L~~~a~~ll~p-gG-~l~~~scs 265 (317)
T d2b78a2 220 IIIIDPPSFARNKK-E---VFSVS-------KDYHKLIRQGLEILSE-NG-LIIASTNA 265 (317)
T ss_dssp EEEECCCCC------C---CCCHH-------HHHHHHHHHHHHTEEE-EE-EEEEEECC
T ss_pred EEEEcChhhccchh-H---HHHHH-------HHHHHHHHHHHHHcCC-CC-EEEEEeCC
Confidence 99998542221111 1 11111 2334466777777743 44 55555544
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=86.41 E-value=0.32 Score=40.40 Aligned_cols=31 Identities=32% Similarity=0.537 Sum_probs=27.3
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
|+|.|| |-.|..+|.+|+++|++|+++.+..
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 677775 7889999999999999999999864
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=86.35 E-value=0.49 Score=37.06 Aligned_cols=72 Identities=14% Similarity=0.073 Sum_probs=42.2
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhc--CCCCeEEEEEeccccCCCcceeeecCc
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEY--NPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
-+|.|.||||-.|.++.+.|.++- .++..+..+...-+....... ...........+......+|+++.+..
T Consensus 6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp 80 (183)
T d2cvoa1 6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLP 80 (183)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCS
T ss_pred cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccc
Confidence 369999999999999999999974 566666544333332222111 111111112222344456888887664
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=86.04 E-value=0.41 Score=37.35 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=28.7
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
+|.|.|+ |-.|.++|..|++.|++|.+.+|+.+
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~ 34 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD 34 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 4667776 88999999999999999999999644
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.97 E-value=1.6 Score=37.27 Aligned_cols=70 Identities=19% Similarity=0.189 Sum_probs=47.4
Q ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHh--cCCCCeEEEEEecccc----CCCcceeeec
Q 039397 45 MEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDE--YNPINEVTLVSLNNKE----SKAVDHLVNT 117 (349)
Q Consensus 45 l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~~~~d~~~----~g~iDvlVnn 117 (349)
.+||+||-.|++.|+ ++..++++|+ +|++++.++ .++...+.. ......+.++..|..+ ..+.|+++..
T Consensus 37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i~se 112 (328)
T d1g6q1_ 37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISE 112 (328)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEEC
T ss_pred CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccCcccceeEEEEE
Confidence 578999999999884 5667788897 788888774 333222222 3345567788777332 3578999875
Q ss_pred C
Q 039397 118 A 118 (349)
Q Consensus 118 A 118 (349)
-
T Consensus 113 ~ 113 (328)
T d1g6q1_ 113 W 113 (328)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=85.93 E-value=0.49 Score=34.54 Aligned_cols=48 Identities=21% Similarity=0.209 Sum_probs=35.8
Q ss_pred CEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhcCCCCeEEEEEec
Q 039397 48 KVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEYNPINEVTLVSLN 104 (349)
Q Consensus 48 k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d 104 (349)
|.++|.|. |.+|+.+++.| +|.+|++++.+++..+..... ...++..|
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~------~~~~i~Gd 48 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRS------GANFVHGD 48 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHT------TCEEEESC
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhc------Cccccccc
Confidence 56888886 77899999999 577888999888876654322 34566666
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=85.88 E-value=0.71 Score=33.89 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=43.7
Q ss_pred CCCCCEEEEeCCC---chHHHHHHHHHHHcC-CeEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecC
Q 039397 44 NMEDKVVIITGAS---SDIGEQIAYEYAKRK-ANLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTA 118 (349)
Q Consensus 44 ~l~~k~vlVTGas---~GIG~ala~~la~~G-~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnA 118 (349)
-++-|+|.|.||| +..|..+.+.|.+.| .+|+.+..+.++... ...+..-.+-.+.+|.++...
T Consensus 5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G-----------~~~y~sl~dlp~~vDlvvi~v 72 (129)
T d2csua1 5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQG-----------VKAYKSVKDIPDEIDLAIIVV 72 (129)
T ss_dssp TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETT-----------EECBSSTTSCSSCCSEEEECS
T ss_pred hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCC-----------eEeecchhhcCCCCceEEEec
Confidence 3567999999999 899999999987766 699999876544332 112222223345788877643
|
| >d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: D-Alanine ligase N-terminal domain domain: D-Ala-D-Ala ligase, N-domain species: Escherichia coli, gene ddlB [TaxId: 562]
Probab=85.69 E-value=1 Score=31.19 Aligned_cols=39 Identities=21% Similarity=0.324 Sum_probs=31.5
Q ss_pred CCCCEEEEeCCCc-------hHHHHHHHHHHHcCCeEEEEecCcch
Q 039397 45 MEDKVVIITGASS-------DIGEQIAYEYAKRKANLVLVARRENR 83 (349)
Q Consensus 45 l~~k~vlVTGas~-------GIG~ala~~la~~G~~Vv~~~r~~~~ 83 (349)
|+.|++++.||.+ -=|+++.+.|-+.|++|+.++.+...
T Consensus 1 M~~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~~~ 46 (96)
T d1iowa1 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVD 46 (96)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSC
T ss_pred CCceEEEEeCcCchhhHhHHhhHHHHHHHHHHcCeeEeeecCcccc
Confidence 4668999999985 23788889999999999999876544
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=85.67 E-value=0.93 Score=36.48 Aligned_cols=72 Identities=10% Similarity=0.087 Sum_probs=51.7
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh-cCCCCeEEEEEecccc----CCCcceeeecCcC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE-YNPINEVTLVSLNNKE----SKAVDHLVNTASL 120 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~~~~d~~~----~g~iDvlVnnAg~ 120 (349)
.|.+||=.|++.|. ++..|+++|++|+.++-+++-++...+.. .....++.++..|.++ .+.+|+++.+-.+
T Consensus 16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 92 (234)
T d1xxla_ 16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAA 92 (234)
T ss_dssp TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccccccccccccccccccccccccceeeeecee
Confidence 36789999998884 45677788999999999988776655444 2233468888888543 4678988876544
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=85.56 E-value=0.36 Score=40.54 Aligned_cols=32 Identities=25% Similarity=0.414 Sum_probs=27.5
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
.|+|.|| |-+|.++|.+|+++|. +|.+++|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3777886 7999999999999996 699999874
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=85.43 E-value=0.31 Score=40.55 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=32.0
Q ss_pred CCCEEEEeCCCchHHHHH-----HHHHHHcCCeEEEEecCcc
Q 039397 46 EDKVVIITGASSDIGEQI-----AYEYAKRKANLVLVARREN 82 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~al-----a~~la~~G~~Vv~~~r~~~ 82 (349)
.++.++|+.|=||.|+-+ |..|+++|++|.++|-+..
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 467788888899999876 8999999999999999864
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=85.30 E-value=1.5 Score=33.77 Aligned_cols=71 Identities=13% Similarity=0.119 Sum_probs=41.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHc-CCeEEE-EecCcch-----hhhHHHHhcCCCC-eEEEEEeccccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKR-KANLVL-VARRENR-----LQGSTIDEYNPIN-EVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~-G~~Vv~-~~r~~~~-----l~~~~~~~~~~~~-~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
+|.|.||||-.|.++.+.|.++ ..++.. ..+..+. ............. ..............+|+++.+.+
T Consensus 3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~alp 81 (179)
T d2g17a1 3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLATA 81 (179)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECSC
T ss_pred EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeecccc
Confidence 6899999999999999999998 566654 3433221 1111112211111 12222222334567899988764
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=85.24 E-value=0.79 Score=34.66 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=40.1
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCC---eEEEEecCcchhhhHHHHhcCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKA---NLVLVARRENRLQGSTIDEYNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~---~Vv~~~r~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
+|.|.||||-.|.++.+.|.++.+ ++...+.+....+ .+............+...+...|+++.+++
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~----~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~ 72 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGK----SLKFKDQDITIEETTETAFEGVDIALFSAG 72 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTC----EEEETTEEEEEEECCTTTTTTCSEEEECSC
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccc----cccccCCcccccccchhhhhhhhhhhhccC
Confidence 688999999999999999999864 3444433322211 111112223333334455567777777664
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=85.17 E-value=0.3 Score=39.32 Aligned_cols=35 Identities=11% Similarity=0.284 Sum_probs=30.8
Q ss_pred CCEEEEeCCCchHHH-----HHHHHHHHcCCeEEEEecCc
Q 039397 47 DKVVIITGASSDIGE-----QIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 47 ~k~vlVTGas~GIG~-----ala~~la~~G~~Vv~~~r~~ 81 (349)
||++.|+|+-||.|+ ++|..|+++|.+|.++|-+.
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~ 41 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 689999999999987 57889999999999999653
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=85.09 E-value=0.31 Score=40.10 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=33.0
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRE 81 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~ 81 (349)
+++++++|+|.|+ ||+|..++..|++.|- ++.++|.+.
T Consensus 26 ~kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ 64 (247)
T d1jw9b_ 26 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT 64 (247)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcc
Confidence 3578899999995 8999999999999997 888988664
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=85.08 E-value=0.28 Score=34.77 Aligned_cols=40 Identities=8% Similarity=0.127 Sum_probs=33.3
Q ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 42 SENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 42 ~~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
..+++||+|+|.|++ -=|..+|..|++.+.+|+...|+..
T Consensus 27 ~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 27 PELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence 457899999999986 5588899999999999888777654
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.05 E-value=3.6 Score=34.08 Aligned_cols=70 Identities=10% Similarity=0.038 Sum_probs=47.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCeEEEEecCcchhhhHHHHhcCC--CCeEEEEEecc-ccCCCcceeeecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKR-KANLVLVARRENRLQGSTIDEYNP--INEVTLVSLNN-KESKAVDHLVNTA 118 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~-G~~Vv~~~r~~~~l~~~~~~~~~~--~~~~~~~~~d~-~~~g~iDvlVnnA 118 (349)
.|.+||=.|++-| .++..++++ |++|+.++.+++..+...+.+... ...+.....|. +..++.|.++..-
T Consensus 52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~~~~fD~i~si~ 125 (280)
T d2fk8a1 52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIE 125 (280)
T ss_dssp TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEES
T ss_pred CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhhhccchhhhhHhh
Confidence 4789999999866 345556655 999999999998877666555222 33455555563 3346778877644
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=84.60 E-value=0.48 Score=36.35 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=27.5
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKANLVLVARR 80 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~ 80 (349)
+++.|+|.|| |.+|.++|..|.+.|++|.++.+.
T Consensus 2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEec
Confidence 4678888886 899999999999999876655443
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=84.57 E-value=1 Score=36.36 Aligned_cols=76 Identities=11% Similarity=0.120 Sum_probs=53.1
Q ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcC----CeEEEEecCcchhhhHHHHh------cCCCCeEEEEEecc----ccCCC
Q 039397 46 EDKVVIITGASSDIGEQIAYEYA-KRK----ANLVLVARRENRLQGSTIDE------YNPINEVTLVSLNN----KESKA 110 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la-~~G----~~Vv~~~r~~~~l~~~~~~~------~~~~~~~~~~~~d~----~~~g~ 110 (349)
+|.+||..|+++|--.++.-+++ ..| .+|+.+.++++-.+...+.+ .....++.+...|. ...++
T Consensus 80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~~~~~ 159 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAP 159 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCS
T ss_pred CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccccccc
Confidence 57899999999887777766665 445 48999999887655443322 11224677888883 34568
Q ss_pred cceeeecCcCC
Q 039397 111 VDHLVNTASLG 121 (349)
Q Consensus 111 iDvlVnnAg~~ 121 (349)
.|.++.+++..
T Consensus 160 fD~Iiv~~a~~ 170 (223)
T d1r18a_ 160 YNAIHVGAAAP 170 (223)
T ss_dssp EEEEEECSCBS
T ss_pred eeeEEEEeech
Confidence 99999988763
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.97 E-value=0.5 Score=37.49 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=27.5
Q ss_pred EEEeCCCchHHHHHHHHHHHcCCeEEEEecCc
Q 039397 50 VIITGASSDIGEQIAYEYAKRKANLVLVARRE 81 (349)
Q Consensus 50 vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~ 81 (349)
|+|.|| |--|...|..|+++|.+|.++.++.
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 788885 7779999999999999999999875
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=83.70 E-value=0.94 Score=34.84 Aligned_cols=69 Identities=12% Similarity=0.042 Sum_probs=44.3
Q ss_pred CCCEEEEeCCC-chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc--CCCCeEEEEEec------cccCCCcceeee
Q 039397 46 EDKVVIITGAS-SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY--NPINEVTLVSLN------NKESKAVDHLVN 116 (349)
Q Consensus 46 ~~k~vlVTGas-~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d------~~~~g~iDvlVn 116 (349)
+|+++|=.|++ |++| .+.+++|++|+.++.+++.++.+.+.+. ....++....+| .....+.|+++.
T Consensus 41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~If~ 116 (171)
T d1ws6a1 41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccccccccCCccceeEE
Confidence 56677755544 5544 4566789999999999988877665552 222344444444 233467999998
Q ss_pred cC
Q 039397 117 TA 118 (349)
Q Consensus 117 nA 118 (349)
+.
T Consensus 117 DP 118 (171)
T d1ws6a1 117 AP 118 (171)
T ss_dssp CC
T ss_pred cc
Confidence 75
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=83.22 E-value=0.73 Score=33.79 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=26.0
Q ss_pred EEEEeCCCchHHHHHHHHHHHcCCeEEEE
Q 039397 49 VVIITGASSDIGEQIAYEYAKRKANLVLV 77 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~la~~G~~Vv~~ 77 (349)
++.|.|++|-.|+++++.+.++|++++..
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~ 30 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLK 30 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence 48999999999999999999999988754
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=82.87 E-value=0.36 Score=38.82 Aligned_cols=35 Identities=9% Similarity=0.260 Sum_probs=30.5
Q ss_pred CEEEEeCCCchHHH-----HHHHHHHHcCCeEEEEecCcc
Q 039397 48 KVVIITGASSDIGE-----QIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 48 k~vlVTGas~GIG~-----ala~~la~~G~~Vv~~~r~~~ 82 (349)
|++.|+++-||.|+ ++|..|+++|.+|.++|-+..
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~ 41 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT 41 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 78999999999886 568899999999999997753
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=82.87 E-value=1.9 Score=35.06 Aligned_cols=73 Identities=12% Similarity=0.086 Sum_probs=52.6
Q ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-eEEEEecCcchhhhHHHHhc--CCCCeEEEEEeccc-----cCCCcceeeec
Q 039397 46 EDKVVIITGASSDIGEQIAYEYAKRKA-NLVLVARRENRLQGSTIDEY--NPINEVTLVSLNNK-----ESKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~GIG~ala~~la~~G~-~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~~~~d~~-----~~g~iDvlVnn 117 (349)
+|++||=.|++.| ..+..+++.|. +|+.+|.+++.++.+..... .....+.+..+|.. ..+..|+++.+
T Consensus 24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~ 100 (252)
T d1ri5a_ 24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 100 (252)
T ss_dssp TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEc
Confidence 4789999999877 34566777775 79999999998887765542 23346778888842 34579999877
Q ss_pred CcCC
Q 039397 118 ASLG 121 (349)
Q Consensus 118 Ag~~ 121 (349)
-++.
T Consensus 101 ~~l~ 104 (252)
T d1ri5a_ 101 FSFH 104 (252)
T ss_dssp SCGG
T ss_pred ceee
Confidence 6543
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=82.51 E-value=0.8 Score=38.31 Aligned_cols=73 Identities=11% Similarity=0.135 Sum_probs=50.5
Q ss_pred CEEEEeC-CCchHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHhc-CCCCeEEEEEeccc---cCCCcceeeecCcCCC
Q 039397 48 KVVIITG-ASSDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDEY-NPINEVTLVSLNNK---ESKAVDHLVNTASLGH 122 (349)
Q Consensus 48 k~vlVTG-as~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~~~~d~~---~~g~iDvlVnnAg~~~ 122 (349)
..++=.| |||-||.+++..+ ..++|+.++.++..++-+..... ....++.++..|.- ..+++|++|.|.-...
T Consensus 110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~~~~~fDlIvsNPPYi~ 187 (274)
T d2b3ta1 110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYID 187 (274)
T ss_dssp CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCBC
T ss_pred cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeecccccccCCCceeEEEecchhhh
Confidence 3455444 4566777776654 46799999999998887776662 23346888888832 2358999999976553
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=81.59 E-value=1.4 Score=33.54 Aligned_cols=72 Identities=8% Similarity=-0.031 Sum_probs=42.9
Q ss_pred EEEEeCCCchHHHHHHHH-HHH-----cCCeEEEEecCcchhhhHHHHh---cCCCCeEEEEEeccccCCCcceeeecCc
Q 039397 49 VVIITGASSDIGEQIAYE-YAK-----RKANLVLVARRENRLQGSTIDE---YNPINEVTLVSLNNKESKAVDHLVNTAS 119 (349)
Q Consensus 49 ~vlVTGas~GIG~ala~~-la~-----~G~~Vv~~~r~~~~l~~~~~~~---~~~~~~~~~~~~d~~~~g~iDvlVnnAg 119 (349)
++.|.||++ +|...+.. +++ .+.++++.|.++++++...... .........-..+.+....-|++|+.||
T Consensus 2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~ 80 (162)
T d1up7a1 2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFR 80 (162)
T ss_dssp EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCC
T ss_pred EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEecc
Confidence 367778754 45444432 221 1468999999998876543222 2223333333333555677899999998
Q ss_pred CC
Q 039397 120 LG 121 (349)
Q Consensus 120 ~~ 121 (349)
..
T Consensus 81 ~~ 82 (162)
T d1up7a1 81 PG 82 (162)
T ss_dssp TT
T ss_pred cC
Confidence 75
|
| >d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Methyltransferase 10 domain domain: Methyltransferase 10 domain containing protein METT10D species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.71 E-value=7.5 Score=31.43 Aligned_cols=74 Identities=9% Similarity=-0.017 Sum_probs=52.0
Q ss_pred CCCEEEEeCCC-chHHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh--cCCCCeEEEEEecc----------ccCCCcc
Q 039397 46 EDKVVIITGAS-SDIGEQIAYEYAKRKANLVLVARRENRLQGSTIDE--YNPINEVTLVSLNN----------KESKAVD 112 (349)
Q Consensus 46 ~~k~vlVTGas-~GIG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~~~~d~----------~~~g~iD 112 (349)
+...+|=.|.+ |-|+..+++++ .+++|+.++.+++.++-....+ ..-...+..+..+. ...+..|
T Consensus 61 ~~~~~LDiGtGsg~I~~~l~~~~--~~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~~~fD 138 (250)
T d2h00a1 61 TLRRGIDIGTGASCIYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYD 138 (250)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred ccceEEEeCCCchHHHHHHHHhC--CCccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHhhhhhhhhcccCcee
Confidence 34467766655 66999998877 4899999999999888776665 22344566555441 2345799
Q ss_pred eeeecCcCC
Q 039397 113 HLVNTASLG 121 (349)
Q Consensus 113 vlVnnAg~~ 121 (349)
++|.|.-..
T Consensus 139 ~ivsNPPY~ 147 (250)
T d2h00a1 139 FCMCNPPFF 147 (250)
T ss_dssp EEEECCCCC
T ss_pred EEEecCccc
Confidence 999998765
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.50 E-value=6.4 Score=32.62 Aligned_cols=69 Identities=12% Similarity=0.072 Sum_probs=46.9
Q ss_pred CCCEEEEeCCCch-HHHHHHHHHHHcCCeEEEEecCcchhhhHHHHh--cCCCCeEEEEEecccc-CCCcceeeec
Q 039397 46 EDKVVIITGASSD-IGEQIAYEYAKRKANLVLVARRENRLQGSTIDE--YNPINEVTLVSLNNKE-SKAVDHLVNT 117 (349)
Q Consensus 46 ~~k~vlVTGas~G-IG~ala~~la~~G~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~~~~d~~~-~g~iDvlVnn 117 (349)
.|.+||=.|++-| ....+|+ +.|++|+.+..+++..+...+.+ ......+.+..+|... .++.|.++..
T Consensus 62 ~G~~VLDiGCG~G~~a~~~a~---~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~fD~i~si 134 (285)
T d1kpga_ 62 PGMTLLDVGCGWGATMMRAVE---KYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSI 134 (285)
T ss_dssp TTCEEEEETCTTSHHHHHHHH---HHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEE
T ss_pred CCCEEEEecCcchHHHHHHHh---cCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhcccccccceeee
Confidence 5789999998755 3333343 35999999999988777665544 2334567777777433 4677887763
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=80.24 E-value=1 Score=35.73 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=33.9
Q ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCeEEEEecCcc
Q 039397 43 ENMEDKVVIITGASSDIGEQIAYEYAKRKANLVLVARREN 82 (349)
Q Consensus 43 ~~l~~k~vlVTGas~GIG~ala~~la~~G~~Vv~~~r~~~ 82 (349)
.+++||+|+|.|++.- |-.+|.++++.+++++.+.|+..
T Consensus 28 ~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~~ 66 (235)
T d1w4xa2 28 VDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTPH 66 (235)
T ss_dssp CCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCCCCEEEEECCCcc-HHHHHHHHHhhhccccccccccc
Confidence 5789999999998764 89999999999999999988753
|