BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039398
IQAKRHFVIGAQLLAQARSSKSKSSASSLAKQAEAEADKAISFDYKDAAAHILKALALDL
QGFKTSALESFDLALSIPAVKTLTEKEKGDALFKRAEVKMSMNRRAGRVDSAIDDLTEAV
KIQDDNVKALCLLGECYEVKKMRDEAKTAYESALKIEPSWTDAQAALDRLVS

High Scoring Gene Products

Symbol, full name Information P value
AT5G65520 protein from Arabidopsis thaliana 2.8e-27
CHY_0221
TPR domain protein
protein from Carboxydothermus hydrogenoformans Z-2901 4.4e-06
CHY_0221
TPR domain protein
protein from Carboxydothermus hydrogenoformans Z-2901 4.4e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039398
        (172 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2155690 - symbol:AT5G65520 "AT5G65520" species...   306  2.8e-27   1
UNIPROTKB|Q3AFJ1 - symbol:CHY_0221 "TPR domain protein" s...   109  4.4e-06   1
TIGR_CMR|CHY_0221 - symbol:CHY_0221 "TPR domain protein" ...   109  4.4e-06   1


>TAIR|locus:2155690 [details] [associations]
            symbol:AT5G65520 "AT5G65520" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
            Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293 EMBL:CP002688
            GenomeReviews:BA000015_GR Gene3D:1.25.40.10 EMBL:AB026639
            UniGene:At.43470 EMBL:BT005632 EMBL:AK119033 IPI:IPI00530534
            RefSeq:NP_201355.1 ProteinModelPortal:Q9LSM3 SMR:Q9LSM3
            STRING:Q9LSM3 PaxDb:Q9LSM3 PRIDE:Q9LSM3 EnsemblPlants:AT5G65520.1
            GeneID:836678 KEGG:ath:AT5G65520 TAIR:At5g65520 eggNOG:NOG331745
            HOGENOM:HOG000077418 InParanoid:Q9LSM3 OMA:ALLGECY PhylomeDB:Q9LSM3
            ProtClustDB:CLSN2686485 ArrayExpress:Q9LSM3 Genevestigator:Q9LSM3
            Uniprot:Q9LSM3
        Length = 206

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 65/161 (40%), Positives = 97/161 (60%)

Query:     1 IQAKRHFVIGAQXXXXXXXXXXXXXXXXXXXXXXXXXDKAISFDYKDAAAHILKALALDL 60
             +Q +R  +  ++                         D  I+    DAA HI++ALALDL
Sbjct:    42 LQTQRQLIQASRLLARARTTPKKSQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDL 101

Query:    61 QGFKTSALESFDLALSIPAVKTLTEKEKGDALFKRAEVKMSMNRRAGRVDSAIDDLTEAV 120
              G  TSAL+SFD+AL+ P +K+L+  E+ DAL KRAE+K+++NRR  R+DSA++DL EAV
Sbjct:   102 LGHHTSALKSFDMALTYPRLKSLSVGERADALVKRAEMKLAVNRRR-RIDSAVEDLEEAV 160

Query:   121 KIQ--DDNVKALCLLGECYEVKKMRDEAKTAYESALKIEPS 159
             ++    D  +   LLGECYE K ++++A+ A+  ALK +PS
Sbjct:   161 RLAAGTDTARLFRLLGECYEFKGLKEKAQWAFNEALKAQPS 201


>UNIPROTKB|Q3AFJ1 [details] [associations]
            symbol:CHY_0221 "TPR domain protein" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
            EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0457
            Gene3D:1.25.40.10 RefSeq:YP_359093.1 ProteinModelPortal:Q3AFJ1
            STRING:Q3AFJ1 GeneID:3728010 KEGG:chy:CHY_0221 PATRIC:21273627
            HOGENOM:HOG000131210 OMA:NEYLYLY ProtClustDB:CLSK2772353
            BioCyc:CHYD246194:GJCN-222-MONOMER Uniprot:Q3AFJ1
        Length = 218

 Score = 109 (43.4 bits), Expect = 4.4e-06, P = 4.4e-06
 Identities = 33/131 (25%), Positives = 61/131 (46%)

Query:    44 DYKDAAAHILKALALDLQ---GFKTSALESFDLALSIPAVKTLTEKEKGDALFKRAEVKM 100
             DY +A +   KA+ LD +    +    +   +      A  TL            A + +
Sbjct:    85 DYNNALSQYKKAIDLDKKYYPAYLNLGILYIETGKYDLAANTLKNAIALQPKSSNAHLNL 144

Query:   101 SMN-RRAGRVDSAIDDLTEAVKIQDDNVKALCLLGECYEVKKMRDEAKTAYESALKIEPS 159
              +   + G+ + A+ +L EA K+   + + +  +G  YE     +EAK  Y+SAL+ +P 
Sbjct:   145 GIAYTKLGKYNEALKELNEAYKLSPGSTRIIYEIGVTYEKMGKIEEAKYQYKSALEFDPK 204

Query:   160 WTDAQAALDRL 170
             + +A+ AL+RL
Sbjct:   205 FEEAKKALERL 215


>TIGR_CMR|CHY_0221 [details] [associations]
            symbol:CHY_0221 "TPR domain protein" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
            EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0457
            Gene3D:1.25.40.10 RefSeq:YP_359093.1 ProteinModelPortal:Q3AFJ1
            STRING:Q3AFJ1 GeneID:3728010 KEGG:chy:CHY_0221 PATRIC:21273627
            HOGENOM:HOG000131210 OMA:NEYLYLY ProtClustDB:CLSK2772353
            BioCyc:CHYD246194:GJCN-222-MONOMER Uniprot:Q3AFJ1
        Length = 218

 Score = 109 (43.4 bits), Expect = 4.4e-06, P = 4.4e-06
 Identities = 33/131 (25%), Positives = 61/131 (46%)

Query:    44 DYKDAAAHILKALALDLQ---GFKTSALESFDLALSIPAVKTLTEKEKGDALFKRAEVKM 100
             DY +A +   KA+ LD +    +    +   +      A  TL            A + +
Sbjct:    85 DYNNALSQYKKAIDLDKKYYPAYLNLGILYIETGKYDLAANTLKNAIALQPKSSNAHLNL 144

Query:   101 SMN-RRAGRVDSAIDDLTEAVKIQDDNVKALCLLGECYEVKKMRDEAKTAYESALKIEPS 159
              +   + G+ + A+ +L EA K+   + + +  +G  YE     +EAK  Y+SAL+ +P 
Sbjct:   145 GIAYTKLGKYNEALKELNEAYKLSPGSTRIIYEIGVTYEKMGKIEEAKYQYKSALEFDPK 204

Query:   160 WTDAQAALDRL 170
             + +A+ AL+RL
Sbjct:   205 FEEAKKALERL 215


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.130   0.353    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      172       147   0.00091  103 3  10 22  0.46    31
                                                     30  0.50    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  171 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.53u 0.08s 20.61t   Elapsed:  00:00:01
  Total cpu time:  20.53u 0.08s 20.61t   Elapsed:  00:00:01
  Start:  Sat May 11 00:10:18 2013   End:  Sat May 11 00:10:19 2013

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