BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039401
(168 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H0Y0|ATG10_HUMAN Ubiquitin-like-conjugating enzyme ATG10 OS=Homo sapiens GN=ATG10
PE=1 SV=1
Length = 220
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
Query: 39 GTSCFKEEE----PTDSATLVQNYDCDKHY-YDFHVIYNASYRVPVLYFRAYCSGGQPLV 93
G +C EE P D +++ + Y++HV+Y+ SY+VPVLYFRA G+PL
Sbjct: 65 GQTCLPMEEAFELPLDDCEVIETAAASEVIKYEYHVLYSCSYQVPVLYFRASFLDGRPLT 124
Query: 94 LDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKK 153
L +I +G+ C L + W IT +EHP L +P++ LHPC T+E+M + K
Sbjct: 125 LKDIWEGVHECYKMRLLQGPWDTITQQEHPILGQPFFVLHPCKTNEFMTPVLKNSQKINK 184
Query: 154 NGVAIELYLVAWFSV 168
N Y+ +W S+
Sbjct: 185 NVN----YITSWLSI 195
>sp|Q8R1P4|ATG10_MOUSE Ubiquitin-like-conjugating enzyme ATG10 OS=Mus musculus GN=Atg10
PE=1 SV=1
Length = 215
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
+++HV+Y+ SY+VPVLYFRA G+PL L++I +G+ C L + W IT +EHP
Sbjct: 95 HEYHVLYSCSYQVPVLYFRASFLDGRPLALEDIWEGVHECYKPRLLQGPWDTITQQEHPI 154
Query: 125 LNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
L +P++ LHPC T+E+M + +N Y+ +W S+
Sbjct: 155 LGQPFFVLHPCKTNEFMTAVLKNSQKINRNVN----YITSWLSL 194
>sp|Q55EL2|ATG10_DICDI Ubiquitin-like-conjugating enzyme ATG10 OS=Dictyostelium discoideum
GN=atg10 PE=3 SV=1
Length = 230
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCS-GGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHP 123
+ F +IY+ SY+VPVLY + S PL +EI LP + +S +IT EHP
Sbjct: 103 FQFDIIYSKSYQVPVLYLNGFSSFDSSPLSWNEIWNNLPLSNLDKNQQSTIPYITQVEHP 162
Query: 124 YLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIE----LYLVAWFSV 168
L P Y+LHPC T MKL+ L + N E YL++W S+
Sbjct: 163 ILGNPCYQLHPCETDNLMKLILLKEKDYNDNNDKKEYFKDYYLLSWLSI 211
>sp|A7KAI2|ATG3_PICAN Autophagy-related protein 3 OS=Pichia angusta GN=ATG3 PE=3 SV=1
Length = 339
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 59 DCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFIT 118
D K YD ++ Y+ SYRVP +Y + S G PL +E+ + + S+ + +T
Sbjct: 181 DPKKRNYDLYITYSTSYRVPKMYLVGFNSNGVPLSPNEMFEDI-------ASDYRQKTVT 233
Query: 119 HEEHPYL-NRPWYKLHPCGTSEWMKLLF 145
E+ P+L N +HPC + M++L
Sbjct: 234 IEKAPFLSNTTSVSIHPCRHANVMRVLM 261
>sp|Q6FQJ2|ATG3_CANGA Autophagy-related protein 3 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ATG3 PE=3
SV=1
Length = 309
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 63 HYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEI-EKGLPSCSAKALSESKWTFITHEE 121
YYD + Y+ SYRVP +Y + G PL E+ E P K + K F
Sbjct: 155 RYYDLFITYSTSYRVPKMYIVGFNGNGTPLTPKEMFEDITPDYRKKTATIEKLPFYKR-- 212
Query: 122 HPYLNRPWYKLHPCGTSEWMKLLF 145
N P +HPC + MK+L
Sbjct: 213 ----NVPSVSIHPCKHANVMKVLL 232
>sp|O43035|ATG3_SCHPO Autophagy-related protein 3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=atg3 PE=3 SV=1
Length = 275
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 29 RGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSG 88
+G+ + G K+EE D + + YYD +++Y+ YR P L+ R + +G
Sbjct: 126 KGQSKELSDSGPLPLKDEEDDDQMVSPVIKEDEGRYYDLYIVYDKYYRTPRLFLRGWNAG 185
Query: 89 GQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYL--NRPWYKLHPCGTSEWMKLLFL 146
GQ L + +I + + E +T E P+ + +HPC + + L +
Sbjct: 186 GQLLTMKDIYEDVS-------GEHAGKTVTMEPFPHYHSHNTMASVHPCKHASVL-LKLI 237
Query: 147 GDTTQKKNGVAIELYLVAWF 166
++ + + ++ Y+V +
Sbjct: 238 KQHRERNDPIRVDQYMVLFL 257
>sp|A7TK16|ATG3_VANPO Autophagy-related protein 3 OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=ATG3 PE=3 SV=1
Length = 318
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 59 DCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEI-EKGLPSCSAKALSESKWTFI 117
+ D+ YYD ++ Y+ SY+VP +Y + G PL +E+ E P +K + K F
Sbjct: 167 NTDRRYYDLYITYSTSYKVPKMYIVGFNGSGSPLTPEEMFEDIAPDYRSKTATIEKLPF- 225
Query: 118 THEEHPYLNR-PWYKLHPCGTSEWMKLLF 145
Y N +HPC + M++L
Sbjct: 226 ------YKNTISSVSIHPCKHANVMRILL 248
>sp|Q5ABQ7|ATG3_CANAL Autophagy-related protein 3 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=ATG3 PE=3 SV=1
Length = 333
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
+D ++ Y+ SYRVP LY + S G PL+ ++ + + S + + + H
Sbjct: 180 FDLYITYSTSYRVPKLYLVGFDSNGIPLLPQQMFEDINSDYKDKTATIENLPVAH----- 234
Query: 125 LNRPWYKLHPCGTSEWMKLLFLGDTTQKKN 154
N +HPC S MK+L KKN
Sbjct: 235 -NTTSVSIHPCKHSSVMKVLMKHSKLNKKN 263
>sp|Q6CL19|ATG3_KLULA Autophagy-related protein 3 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=ATG3 PE=3 SV=1
Length = 302
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 64 YYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHP 123
+YD ++ Y+ SYRVP +Y Y + G PL D++ +A S++ T E P
Sbjct: 164 FYDLYITYSTSYRVPKMYLCGYDNDGTPLSPDQM---FEDIAADYRSKTA----TIEPLP 216
Query: 124 YL--NRPWYKLHPCGTSEWMKLLF 145
+L N +HPC + MK+L
Sbjct: 217 FLKGNNISVSIHPCKHANVMKVLM 240
>sp|Q6PFS7|ATG3_DANRE Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio GN=atg3 PE=2
SV=1
Length = 317
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
YD ++ Y+ Y+ P L+ Y QPL +D++ + + K +T E HP
Sbjct: 203 YDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDISQDHVKKT-------VTIENHPN 255
Query: 125 LNRPWY-KLHPCGTSEWMKLLFLGDTTQKKNG-VAIELYLVAWF 166
L P +HPC +E MK + +T + G + + +YL+ +
Sbjct: 256 LPPPAMCSVHPCRHAEVMKKII--ETVAEGGGELGVHMYLLIFL 297
>sp|A3LX85|ATG3_PICST Autophagy-related protein 3 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=ATG3 PE=3 SV=2
Length = 318
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
YD ++ Y+ SYRVP +Y + + G PL D++ + + + + + + H
Sbjct: 167 YDMYITYSTSYRVPKMYLVGFNANGIPLTPDQMFEDINADYKDKTATIENLPVAH----- 221
Query: 125 LNRPWYKLHPCGTSEWMKLLFLGDTTQK 152
N +HPC S MK+L ++K
Sbjct: 222 -NTTSVSIHPCKHSSVMKVLMKHSKSKK 248
>sp|P40344|ATG3_YEAST Autophagy-related protein 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ATG3 PE=1 SV=1
Length = 310
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 62 KHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEE 121
+ YYD ++ Y+ SYRVP +Y + S G PL E+ SA +++ T E+
Sbjct: 166 ERYYDLYIAYSTSYRVPKMYIVGFNSNGSPL---SPEQMFEDISADYRTKTA----TIEK 218
Query: 122 HPYLNRPW--YKLHPCGTSEWMKLLF 145
P+ +HPC + MK+L
Sbjct: 219 LPFYKNSVLSVSIHPCKHANVMKILL 244
>sp|A6ZS81|ATG3_YEAS7 Autophagy-related protein 3 OS=Saccharomyces cerevisiae (strain
YJM789) GN=ATG3 PE=3 SV=1
Length = 310
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 62 KHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEE 121
+ YYD ++ Y+ SYRVP +Y + S G PL E+ SA +++ T E+
Sbjct: 166 ERYYDLYIAYSTSYRVPKMYIVGFNSNGSPL---SPEQMFEDISADYRTKTA----TIEK 218
Query: 122 HPYLNRPW--YKLHPCGTSEWMKLLF 145
P+ +HPC + MK+L
Sbjct: 219 LPFYKNSVLSVSIHPCKHANVMKILL 244
>sp|A5DVH6|ATG3_LODEL Autophagy-related protein 3 OS=Lodderomyces elongisporus (strain
ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL
YB-4239) GN=ATG3 PE=3 SV=1
Length = 362
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 54 LVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESK 113
+VQ YD ++ Y+ SYRVP LY + + G PL+ ++ + + S + +
Sbjct: 193 IVQGSHSKLRRYDLYITYSTSYRVPKLYLVGFDANGIPLLPQQMFEDINSDYKDKTATIE 252
Query: 114 WTFITHEEHPYLNRPWYKLHPCGTSEWMKLLF 145
+ H N +HPC S M++L
Sbjct: 253 QLPVAH------NTTSVSIHPCKHSSVMRVLM 278
>sp|Q6BSC4|ATG3_DEBHA Autophagy-related protein 3 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ATG3 PE=3 SV=2
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 46 EEPTDSATLVQ-NYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSC 104
E+ D LV+ N + + YD ++ Y+ SYRVP +Y + S G PL LP
Sbjct: 152 EDENDFEELVETNANSNLRKYDLYITYSTSYRVPKMYLVGFNSNGIPL--------LPKQ 203
Query: 105 SAKALS-ESKWTFITHEEHPY-LNRPWYKLHPCGTSEWMKLLFLGDTTQKK 153
+ +S + + T E P N +HPC S MK+L KK
Sbjct: 204 MFEDISGDYRDKTATIETLPVSYNTMSVSIHPCKHSSVMKVLMAHAAASKK 254
>sp|Q6C4Q9|ATG3_YARLI Autophagy-related protein 3 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=ATG3 PE=3 SV=1
Length = 366
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEI-EKGLPSCSAKALSESKWTFITHEEHP 123
Y+ ++ Y+ SYRVP ++ Y G PL +++ E +P K ++ + TF
Sbjct: 223 YNLYIAYSTSYRVPKMFLSGYSPEGSPLTPEDMFEDIIPEYRDKTVTIERPTFQD----- 277
Query: 124 YLNRPWYKLHPCGTSEWMKLLF 145
N +HPC + M++L
Sbjct: 278 --NITMVAIHPCKHANVMRVLM 297
>sp|A7F172|ATG3_SCLS1 Autophagy-related protein 3 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=atg3 PE=3 SV=1
Length = 362
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 17/97 (17%)
Query: 55 VQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQP----LVLDEIEKGLPSCSAKALS 110
N + + Y ++ Y YR P LY Y S QP L++++I +
Sbjct: 171 ADNANSSRRTYTIYIAYTPYYRTPRLYLSGYLSSSQPLPPHLMMEDI-----------VG 219
Query: 111 ESKWTFITHEEHPYL--NRPWYKLHPCGTSEWMKLLF 145
+ K +T E+ PY N +HPC + MK L
Sbjct: 220 DYKDKTVTLEDFPYFSNNIKMASIHPCKHASVMKTLL 256
>sp|Q9CPX6|ATG3_MOUSE Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus GN=Atg3 PE=1
SV=1
Length = 314
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
YD ++ Y+ Y+ P L+ Y QPL ++ + + + K +T E HP+
Sbjct: 200 YDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKT-------VTIENHPH 252
Query: 125 L-NRPWYKLHPCGTSEWMKLLFLGDTTQKKNG-VAIELYLVAWF 166
L P +HPC +E MK + +T + G + + +YL+ +
Sbjct: 253 LPPPPMCSVHPCRHAEVMKKII--ETVAEGGGELGVHMYLLIFL 294
>sp|Q0VCL3|ATG3_BOVIN Ubiquitin-like-conjugating enzyme ATG3 OS=Bos taurus GN=ATG3 PE=2
SV=1
Length = 314
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
YD ++ Y+ Y+ P L+ Y QPL ++ + + + K +T E HP+
Sbjct: 200 YDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKT-------VTIENHPH 252
Query: 125 L-NRPWYKLHPCGTSEWMKLLFLGDTTQKKNG-VAIELYLVAWF 166
L P +HPC +E MK + +T + G + + +YL+ +
Sbjct: 253 LPPPPMCSVHPCRHAEVMKKII--ETVAEGGGELGVHMYLLIFL 294
>sp|Q9NT62|ATG3_HUMAN Ubiquitin-like-conjugating enzyme ATG3 OS=Homo sapiens GN=ATG3 PE=1
SV=1
Length = 314
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
YD ++ Y+ Y+ P L+ Y QPL ++ + + + K +T E HP+
Sbjct: 200 YDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKT-------VTIENHPH 252
Query: 125 L-NRPWYKLHPCGTSEWMKLLFLGDTTQKKNG-VAIELYLVAWF 166
L P +HPC +E MK + +T + G + + +YL+ +
Sbjct: 253 LPPPPMCSVHPCRHAEVMKKII--ETVAEGGGELGVHMYLLIFL 294
>sp|Q6AZ50|ATG3_RAT Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus GN=Atg3
PE=2 SV=1
Length = 314
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
YD ++ Y+ Y+ P L+ Y QPL ++ + + + K +T E HP+
Sbjct: 200 YDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKT-------VTIENHPH 252
Query: 125 L-NRPWYKLHPCGTSEWMKLLFLGDTTQKKNG-VAIELYLVAWF 166
L P +HPC +E MK + +T + G + + +YL+ +
Sbjct: 253 LPPPPMCSVHPCRHAEVMKKII--ETVAEGGGELGVHMYLLIFL 294
>sp|Q51LD2|ATG3_MAGO7 Autophagy-related protein 3 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=ATG3 PE=3 SV=1
Length = 350
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 62 KHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEE 121
+ Y +++Y+ YR P LY Y + GQPL + + + + + K +T E+
Sbjct: 176 RRTYTLYIMYSPYYRTPRLYLSGYGANGQPLPPHNMMEDI-------MGDYKDKTVTLED 228
Query: 122 HPYL--NRPWYKLHPCGTSEWMKLLF 145
P+ N +HPC + MK L
Sbjct: 229 FPFFANNIKMASVHPCKHAPVMKTLL 254
>sp|Q755K1|ATG3_ASHGO Autophagy-related protein 3 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG3 PE=3 SV=2
Length = 282
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 30 GEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGG 89
G E +E E+ + ++Q +YD ++ Y+ SYRVP +Y + + G
Sbjct: 109 GGEEIDIDEMLQEMDIEDQSGEQDIIQLRPSHTRFYDLYITYSTSYRVPKMYLVGFNNDG 168
Query: 90 QPLVLDEIEKGL-PSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLF 145
PL ++ + + P K + K F +HPC + M++L
Sbjct: 169 TPLTPQQMFQDIAPDYRTKTATIEKLPFFKSAVVA------VSIHPCRHANVMRVLM 219
>sp|Q5I0S6|ATG3_XENTR Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus tropicalis
GN=atg3 PE=2 SV=1
Length = 312
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
YD ++ Y+ Y+ P L+ Y +PL ++ + + + K +T E HP+
Sbjct: 198 YDLYITYDKYYQTPRLWLFGYDEQRRPLTVENMYEDISQDHVKKT-------VTIENHPH 250
Query: 125 LNRPWY-KLHPCGTSEWMKLLFLGDTTQKKNG-VAIELYLVAWF 166
L P +HPC +E MK + +T + G + + +YL+ +
Sbjct: 251 LPPPPMCSVHPCRHAEVMKKII--ETVAEGGGELGVHMYLLIFL 292
>sp|Q6GQE7|ATG3_XENLA Ubiquitin-like-conjugating enzyme ATG3 OS=Xenopus laevis GN=atg3
PE=2 SV=1
Length = 313
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
YD ++ Y+ Y+ P L+ Y +PL ++ + + + K +T E HP+
Sbjct: 199 YDLYITYDKYYQTPRLWLFGYDEQRRPLAVENMYEDISQDHVKKT-------VTIENHPH 251
Query: 125 LNRPWY-KLHPCGTSEWMKLLFLGDTTQKKNG-VAIELYLVAWF 166
L P +HPC +E MK + +T + G + + +YL+ +
Sbjct: 252 LPPPPMCSVHPCRHAEVMKKII--ETVAEGGGELGVHMYLLIFL 293
>sp|A7KAI8|ATG10_PICAN Ubiquitin-like-conjugating enzyme ATG10 OS=Pichia angusta GN=ATG10
PE=3 SV=1
Length = 149
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 69 VIYNASYRVPVLYFRAYCSG------GQPLVLDE--IEKGLPSCSAKALSESKWTFITHE 120
V Y+ +Y P+L FR + + LV D+ I+K + + + IT
Sbjct: 46 VFYHQTYAAPLLTFRIWQLQVSDDIETRRLVFDQTLIDKLVTRNGSLRVDRRVDPAITLV 105
Query: 121 EHPYLNRPWYKLHPCGTSEWMK 142
+HP L +P+Y+LHPC +++ ++
Sbjct: 106 DHPVLGKPFYQLHPCQSAQLLE 127
>sp|A5DN42|ATG3_PICGU Autophagy-related protein 3 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=ATG3 PE=3 SV=3
Length = 293
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 10/97 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALS-ESKWTFITHEEHP 123
YD ++ Y+ SYRVP +Y + G PL LP + +S + + T E P
Sbjct: 154 YDLYITYSTSYRVPKMYLVGFNDNGIPL--------LPHQMFEDISGDYRDKTATIENLP 205
Query: 124 Y-LNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIE 159
N +HPC S MK+L T ++ E
Sbjct: 206 VSFNTTSVSIHPCKHSSVMKVLMKHAKTSREKAREFE 242
>sp|Q550A8|ATG3_DICDI Autophagy-related protein 3 OS=Dictyostelium discoideum GN=atg3
PE=3 SV=3
Length = 338
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
YD + Y+ Y+ P ++ Y +PL +EI + + A +T + HP+
Sbjct: 225 YDISITYDKYYQTPRVWLFGYDENRKPLKPEEIFEDISEDHAHKT-------VTIDSHPH 277
Query: 125 LNRPWYKLHPCGTSEWMKLLFLGDTTQKKNG 155
L + +HPC + MK L Q +NG
Sbjct: 278 LGISFAYIHPCRHAAVMKKLV---DRQSENG 305
>sp|Q0U388|ATG3_PHANO Autophagy-related protein 3 OS=Phaeosphaeria nodorum (strain SN15 /
ATCC MYA-4574 / FGSC 10173) GN=ATG3 PE=3 SV=1
Length = 350
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
Y ++ Y+A YR P LY Y + PL E+ + + + + K +T E+ P+
Sbjct: 179 YTLYICYSAHYRTPRLYLSGYGATSVPLKPQEMMEDI-------VGDYKDKTVTIEDFPF 231
Query: 125 LNRPW--YKLHPCGTSEWMKLLF 145
+HPC + MK+L
Sbjct: 232 FEHALKTASVHPCKHASVMKVLL 254
>sp|Q5AEI2|ATG10_CANAL Ubiquitin-like-conjugating enzyme ATG10 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=ATG10 PE=3 SV=1
Length = 177
Score = 33.9 bits (76), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 66 DFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYL 125
DF + ++ Y VP+L R Y + + L S A+ + H L
Sbjct: 60 DFTISFDDLYGVPLLNMRLY----------DNDTFLTSPMAQRTLAVGICRVDLHNHHLL 109
Query: 126 NRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
+PW ++HPC T + + T K N V YL WF +
Sbjct: 110 QQPWLQVHPCETLQTIDSHLKNTPTCKYNSVI--QYLCCWFGL 150
>sp|Q6FWS7|ATG10_CANGA Ubiquitin-like-conjugating enzyme ATG10 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ATG10 PE=3 SV=1
Length = 159
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 23/114 (20%)
Query: 64 YYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESK--------WT 115
+ + + ++ YR P+L R + + LD IE + SA+ ++ +
Sbjct: 53 HIELLITFSRVYREPLLLIRVWATTA----LDGIETSQLAHSAETMATLRIPSYLTLGLD 108
Query: 116 FITHEEHPY-LNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
I ++P+ L WY +HPC T + +GD ++ YL W SV
Sbjct: 109 TILDAQYPHALQGAWYSVHPCDTRD-----IVGDDVTVRDT-----YLDRWVSV 152
>sp|Q2U7R4|ATG3_ASPOR Autophagy-related protein 3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=atg3 PE=3 SV=1
Length = 356
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 17/87 (19%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQP----LVLDEIEKGLPSCSAKALSESKWTFITHE 120
Y+ ++ Y+ YR P LY Y S +P L+++++ + + K +T E
Sbjct: 180 YNLYITYSNFYRTPRLYMSGYLSPSEPLPPHLMMEDV-----------VGDYKDKTVTLE 228
Query: 121 EHPYL--NRPWYKLHPCGTSEWMKLLF 145
+ P+ N +HPC + MK L
Sbjct: 229 DFPWYDGNVKMASVHPCRHASVMKTLL 255
>sp|C8VDI2|ATG3_EMENI Autophagy-related protein 3 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=atg3
PE=3 SV=1
Length = 365
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 17/87 (19%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQP----LVLDEIEKGLPSCSAKALSESKWTFITHE 120
Y+ ++ Y+ YR P LY Y S +P L++++I + + K +T E
Sbjct: 182 YNLYITYSNFYRTPRLYLSGYLSPSEPLPPKLMMEDI-----------VGDYKDKTVTLE 230
Query: 121 EHPYLNRP--WYKLHPCGTSEWMKLLF 145
+ P+ + +HPC + MK L
Sbjct: 231 DFPWFDGSLQMASVHPCRHASVMKTLL 257
>sp|A1DF15|ATG3_NEOFI Autophagy-related protein 3 OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg3 PE=3
SV=1
Length = 353
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 17/87 (19%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQP----LVLDEIEKGLPSCSAKALSESKWTFITHE 120
Y+ ++ Y+ YR P LY Y S +P L++++I + + K +T E
Sbjct: 180 YNLYITYSNFYRTPRLYLSGYLSPSEPLPPHLMMEDI-----------VGDYKDKTVTLE 228
Query: 121 EHPYLNR--PWYKLHPCGTSEWMKLLF 145
+ P+ + +HPC + MK L
Sbjct: 229 DFPWFDGGLKMASVHPCRHASVMKTLL 255
>sp|Q4WUE5|ATG3_ASPFU Autophagy-related protein 3 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg3 PE=3
SV=1
Length = 353
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 17/87 (19%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQP----LVLDEIEKGLPSCSAKALSESKWTFITHE 120
Y+ ++ Y+ YR P LY Y S +P L++++I + + K +T E
Sbjct: 180 YNLYITYSNFYRTPRLYLSGYLSPSEPLPPHLMMEDI-----------VGDYKDKTVTLE 228
Query: 121 EHPYLNR--PWYKLHPCGTSEWMKLLF 145
+ P+ + +HPC + MK L
Sbjct: 229 DFPWFDGGVKMASVHPCRHASVMKTLL 255
>sp|A1CAN8|ATG3_ASPCL Autophagy-related protein 3 OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=atg3 PE=3 SV=1
Length = 358
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 17/87 (19%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQP----LVLDEIEKGLPSCSAKALSESKWTFITHE 120
Y+ ++ Y+ YR P LY Y S +P L++++I + + K +T E
Sbjct: 182 YNLYITYSNFYRTPRLYLSGYLSPSEPLPPHLMMEDI-----------VGDYKDKTVTLE 230
Query: 121 EHPYLNR--PWYKLHPCGTSEWMKLLF 145
+ P+ + +HPC + MK L
Sbjct: 231 DFPWFDGGVKMATVHPCRHASVMKTLL 257
>sp|Q6BJP0|ATG10_DEBHA Ubiquitin-like-conjugating enzyme ATG10 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=ATG10 PE=3 SV=2
Length = 221
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 66 DFHVIYNASYRVPVLYFRAYCSGGQPLV--LDEIEKGLPSCSAKALSESKWTF------- 116
DF + Y+ Y VPVLYFRA+ + +DE + P S + L + ++
Sbjct: 83 DFTLSYDDFYMVPVLYFRAFKDNSKSTSGNIDE-TRVTPIVSTEELVSNYYSVLGLSSDS 141
Query: 117 -----ITHEEHPYL--NRPWYKLHPCGTSEWMKLLFLGD 148
+T + H + + W+ +HPC T ++ D
Sbjct: 142 NLGPTVTLDSHHLITDSSVWFYVHPCETLHRLREFMEAD 180
>sp|A7KAL4|ATG3_PENCW Autophagy-related protein 3 OS=Penicillium chrysogenum (strain ATCC
28089 / DSM 1075 / Wisconsin 54-1255) GN=atg3 PE=3 SV=1
Length = 363
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 17/87 (19%)
Query: 65 YDFHVIYNASYRVPVLYFRAYCSGGQP----LVLDEIEKGLPSCSAKALSESKWTFITHE 120
Y ++ Y+ YR P LY Y S +P L++++I + + K +T E
Sbjct: 189 YTLYITYSNFYRTPRLYLSGYLSPSEPLPPHLMMEDI-----------VGDYKDKTVTLE 237
Query: 121 EHPYL--NRPWYKLHPCGTSEWMKLLF 145
+ P+ + +HPC + MK L
Sbjct: 238 DFPWFEGSVKMASVHPCRHASVMKTLL 264
>sp|O97398|CTR_PHACE Chymotrypsin OS=Phaedon cochleariae PE=2 SV=1
Length = 276
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 53 TLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSG--GQPLVLDEIEKGLPSCSAKALS 110
T++ N +C+ F ++ + + R+ CSG G PLV+D ++ G+ S +
Sbjct: 195 TIISNKECND---VFKIVQPTEVCLSIAGGRSACSGDSGGPLVIDNVQHGIVSYGSSYCR 251
Query: 111 ESKWTFITHEEHPYLNRPWYKLHPCGTSEW 140
+ F YLN W + H SEW
Sbjct: 252 STPSVFT--RVSSYLN--WLQTH----SEW 273
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,932,079
Number of Sequences: 539616
Number of extensions: 2854718
Number of successful extensions: 4597
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4571
Number of HSP's gapped (non-prelim): 39
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)