Query 039402
Match_columns 1496
No_of_seqs 787 out of 5702
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 09:20:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039402.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039402hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 2E-274 4E-279 2614.1 148.1 1255 222-1487 122-1380(1381)
2 PLN03130 ABC transporter C fam 100.0 1E-213 3E-218 2167.9 173.8 1439 7-1486 29-1478(1622)
3 PLN03232 ABC transporter C fam 100.0 3E-209 6E-214 2128.2 173.1 1435 7-1486 29-1475(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 1E-206 3E-211 2105.1 174.8 1356 99-1482 101-1520(1522)
5 TIGR01271 CFTR_protein cystic 100.0 1E-198 2E-203 2019.5 154.5 1251 222-1484 3-1454(1490)
6 PTZ00243 ABC transporter; Prov 100.0 2E-189 3E-194 1928.4 152.5 1259 220-1486 57-1550(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 6E-145 1E-149 1372.6 115.0 1162 297-1483 21-1226(1228)
8 PTZ00265 multidrug resistance 100.0 2E-136 3E-141 1394.1 141.4 1185 290-1482 49-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 1.8E-90 4E-95 835.0 59.5 518 965-1486 188-708 (716)
10 COG2274 SunT ABC-type bacterio 100.0 7.5E-84 1.6E-88 812.9 67.1 565 911-1482 142-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 4.8E-80 1E-84 786.1 68.1 544 931-1483 20-565 (567)
12 TIGR00958 3a01208 Conjugate Tr 100.0 2.1E-78 4.5E-83 786.2 67.4 558 911-1479 149-711 (711)
13 PRK11174 cysteine/glutathione 100.0 4.3E-78 9.4E-83 772.3 68.8 564 912-1483 11-585 (588)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.8E-77 6.1E-82 776.3 71.4 544 929-1481 140-684 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.4E-77 7.4E-82 779.0 68.6 564 910-1479 141-709 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 5.2E-77 1.1E-81 776.4 68.5 562 910-1480 143-707 (708)
17 PRK10790 putative multidrug tr 100.0 2.3E-76 5.1E-81 756.4 71.1 547 930-1484 28-577 (592)
18 PRK11176 lipid transporter ATP 100.0 1.6E-75 3.5E-80 748.1 69.9 506 971-1482 71-579 (582)
19 TIGR03375 type_I_sec_LssB type 100.0 1.2E-75 2.7E-80 761.8 68.9 554 910-1470 134-689 (694)
20 PRK11160 cysteine/glutathione 100.0 7.3E-75 1.6E-79 737.3 68.9 560 913-1480 6-572 (574)
21 TIGR02203 MsbA_lipidA lipid A 100.0 3.8E-74 8.2E-79 734.5 70.0 547 930-1482 19-568 (571)
22 TIGR01846 type_I_sec_HlyB type 100.0 5.2E-74 1.1E-78 746.0 70.6 565 910-1482 126-692 (694)
23 COG4988 CydD ABC-type transpor 100.0 1.3E-73 2.9E-78 678.6 62.8 512 965-1484 40-557 (559)
24 KOG0056 Heavy metal exporter H 100.0 1.6E-75 3.5E-80 662.1 38.7 498 978-1484 272-776 (790)
25 COG4987 CydC ABC-type transpor 100.0 1E-72 2.2E-77 658.3 60.0 500 974-1480 67-571 (573)
26 TIGR02204 MsbA_rel ABC transpo 100.0 3.2E-72 6.8E-77 717.3 70.2 566 912-1482 7-575 (576)
27 TIGR02868 CydC thiol reductant 100.0 7.2E-73 1.6E-77 715.3 63.6 507 930-1441 18-529 (529)
28 KOG0055 Multidrug/pheromone ex 100.0 1.8E-74 4E-79 731.8 48.8 516 963-1484 69-590 (1228)
29 PRK13657 cyclic beta-1,2-gluca 100.0 5.7E-72 1.2E-76 715.0 71.2 550 927-1484 21-572 (588)
30 KOG0058 Peptide exporter, ABC 100.0 5.2E-72 1.1E-76 675.1 63.4 548 292-842 138-704 (716)
31 PRK11174 cysteine/glutathione 100.0 5.4E-71 1.2E-75 706.9 74.0 547 289-842 10-584 (588)
32 TIGR01192 chvA glucan exporter 100.0 1.2E-70 2.6E-75 699.5 71.0 563 914-1487 10-575 (585)
33 PRK10789 putative multidrug tr 100.0 4.8E-71 1E-75 702.2 66.2 512 967-1484 38-552 (569)
34 KOG0057 Mitochondrial Fe/S clu 100.0 2.9E-71 6.2E-76 646.2 55.1 501 965-1481 74-585 (591)
35 TIGR02857 CydD thiol reductant 100.0 2.3E-70 5E-75 692.5 65.1 518 931-1453 9-529 (529)
36 COG2274 SunT ABC-type bacterio 100.0 2.8E-69 6E-74 680.9 72.5 549 288-840 141-706 (709)
37 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.1E-67 2.3E-72 686.6 75.3 544 289-840 124-683 (686)
38 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.9E-68 1.5E-72 691.5 73.8 544 290-839 143-709 (710)
39 COG5265 ATM1 ABC-type transpor 100.0 8.5E-71 1.8E-75 622.2 39.4 488 985-1480 2-496 (497)
40 TIGR01842 type_I_sec_PrtD type 100.0 5.6E-68 1.2E-72 671.7 67.0 528 930-1469 11-542 (544)
41 TIGR00958 3a01208 Conjugate Tr 100.0 2E-67 4.3E-72 683.6 73.0 540 294-838 154-710 (711)
42 TIGR03375 type_I_sec_LssB type 100.0 3.9E-67 8.6E-72 682.2 73.7 538 289-831 135-689 (694)
43 PTZ00265 multidrug resistance 100.0 6E-68 1.3E-72 722.6 66.4 514 966-1483 98-729 (1466)
44 COG1123 ATPase components of v 100.0 3.5E-69 7.7E-74 644.9 45.5 464 617-1481 5-531 (539)
45 TIGR01193 bacteriocin_ABC ABC- 100.0 4.4E-66 9.6E-71 673.8 74.3 543 291-839 146-706 (708)
46 PRK11176 lipid transporter ATP 100.0 2.4E-65 5.3E-70 654.3 74.3 545 292-841 16-578 (582)
47 TIGR02203 MsbA_lipidA lipid A 100.0 4.9E-65 1.1E-69 650.6 73.5 544 292-840 5-566 (571)
48 PRK10261 glutathione transport 100.0 1.6E-67 3.5E-72 673.4 49.7 485 616-1481 11-566 (623)
49 PRK10790 putative multidrug tr 100.0 1.9E-64 4.1E-69 646.6 75.6 543 292-842 14-575 (592)
50 TIGR01194 cyc_pep_trnsptr cycl 100.0 4.6E-65 9.9E-70 645.1 65.9 514 933-1461 26-551 (555)
51 TIGR02204 MsbA_rel ABC transpo 100.0 3E-64 6.6E-69 643.7 73.7 550 289-840 6-573 (576)
52 PRK15134 microcin C ABC transp 100.0 5.3E-67 1.1E-71 660.2 45.8 449 617-1472 5-518 (529)
53 PRK11160 cysteine/glutathione 100.0 5.6E-64 1.2E-68 637.7 72.9 541 295-840 10-572 (574)
54 TIGR00956 3a01205 Pleiotropic 100.0 3E-66 6.5E-71 705.9 53.3 251 1202-1466 715-990 (1394)
55 TIGR01846 type_I_sec_HlyB type 100.0 1.6E-63 3.4E-68 647.9 75.0 547 289-840 127-690 (694)
56 TIGR02868 CydC thiol reductant 100.0 6.3E-64 1.4E-68 633.8 69.2 505 294-802 6-529 (529)
57 PRK13657 cyclic beta-1,2-gluca 100.0 2.1E-63 4.6E-68 636.0 74.3 541 294-841 12-569 (588)
58 PRK13549 xylose transporter AT 100.0 1.8E-66 3.9E-71 651.9 43.6 443 617-1468 5-493 (506)
59 PRK09700 D-allose transporter 100.0 2.3E-66 5E-71 652.0 43.2 441 617-1466 5-495 (510)
60 PRK10789 putative multidrug tr 100.0 2.3E-63 5E-68 631.9 70.8 529 310-842 4-550 (569)
61 COG1132 MdlB ABC-type multidru 100.0 3.7E-63 8.1E-68 631.1 72.2 540 293-842 8-564 (567)
62 COG4988 CydD ABC-type transpor 100.0 4.1E-63 8.8E-68 589.2 67.4 529 305-843 4-556 (559)
63 TIGR03269 met_CoM_red_A2 methy 100.0 5.5E-66 1.2E-70 650.1 45.1 438 618-1469 1-517 (520)
64 TIGR01842 type_I_sec_PrtD type 100.0 8.1E-63 1.8E-67 624.6 69.9 522 297-830 2-542 (544)
65 PRK15439 autoinducer 2 ABC tra 100.0 1.8E-65 3.8E-70 642.5 45.1 447 617-1470 11-493 (510)
66 TIGR01192 chvA glucan exporter 100.0 3.6E-62 7.8E-67 621.9 75.0 541 294-841 12-569 (585)
67 PRK10762 D-ribose transporter 100.0 1.4E-65 3.1E-70 643.0 43.2 437 617-1468 4-483 (501)
68 PRK15064 ABC transporter ATP-b 100.0 1.2E-64 2.5E-69 639.0 50.9 201 1244-1470 318-526 (530)
69 TIGR01257 rim_protein retinal- 100.0 3E-62 6.6E-67 661.2 76.0 216 1243-1470 1935-2160(2272)
70 TIGR02633 xylG D-xylose ABC tr 100.0 3.4E-65 7.4E-70 640.3 43.1 443 618-1467 2-490 (500)
71 PRK11288 araG L-arabinose tran 100.0 7.5E-65 1.6E-69 636.5 43.0 439 617-1468 4-484 (501)
72 TIGR02857 CydD thiol reductant 100.0 8.3E-62 1.8E-66 614.5 68.2 511 299-814 1-529 (529)
73 PRK10982 galactose/methyl gala 100.0 2.4E-64 5.2E-69 630.8 43.1 436 621-1468 2-479 (491)
74 PRK10938 putative molybdenum t 100.0 3E-64 6.5E-69 630.2 43.2 440 617-1463 3-486 (490)
75 PLN03232 ABC transporter C fam 100.0 4.7E-62 1E-66 671.7 67.1 474 990-1483 366-841 (1495)
76 PRK10522 multidrug transporter 100.0 1.3E-61 2.8E-66 613.5 65.6 467 974-1461 57-530 (547)
77 PLN03130 ABC transporter C fam 100.0 1.1E-61 2.3E-66 667.3 67.7 473 990-1483 366-841 (1622)
78 PRK11819 putative ABC transpor 100.0 1.6E-62 3.4E-67 621.6 51.7 481 617-1471 6-535 (556)
79 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.8E-62 6.1E-67 619.3 51.2 479 617-1469 4-531 (552)
80 COG4172 ABC-type uncharacteriz 100.0 1.9E-62 4.2E-67 549.5 42.1 455 616-1477 5-524 (534)
81 COG4987 CydC ABC-type transpor 100.0 4.6E-60 1E-64 552.4 62.1 544 290-839 6-570 (573)
82 TIGR00957 MRP_assoc_pro multi 100.0 1.2E-59 2.6E-64 648.7 73.6 548 290-841 953-1519(1522)
83 PRK10636 putative ABC transpor 100.0 4.5E-61 9.7E-66 614.4 51.1 200 1244-1469 311-517 (638)
84 KOG0057 Mitochondrial Fe/S clu 100.0 8.8E-59 1.9E-63 541.7 58.6 522 312-840 41-584 (591)
85 PRK11147 ABC transporter ATPas 100.0 1.4E-59 3.1E-64 602.3 50.6 199 1245-1469 319-528 (635)
86 PLN03140 ABC transporter G fam 100.0 1.2E-58 2.7E-63 627.9 61.1 211 1245-1465 867-1106(1470)
87 KOG0056 Heavy metal exporter H 100.0 3.3E-59 7.1E-64 529.7 41.8 529 306-843 220-775 (790)
88 COG4618 ArpD ABC-type protease 100.0 2.2E-58 4.7E-63 532.7 49.3 485 972-1470 70-561 (580)
89 PTZ00243 ABC transporter; Prov 100.0 5E-57 1.1E-61 620.7 72.0 470 370-841 1026-1545(1560)
90 PLN03073 ABC transporter F fam 100.0 6.4E-59 1.4E-63 595.0 46.6 200 1243-1467 506-712 (718)
91 TIGR01194 cyc_pep_trnsptr cycl 100.0 1E-56 2.2E-61 569.0 66.1 513 293-822 9-551 (555)
92 COG4618 ArpD ABC-type protease 100.0 6.7E-57 1.4E-61 520.3 55.5 529 289-831 11-561 (580)
93 COG0488 Uup ATPase components 100.0 1.1E-57 2.4E-62 558.8 45.5 485 617-1470 3-526 (530)
94 TIGR01271 CFTR_protein cystic 100.0 1.2E-54 2.7E-59 597.2 71.8 475 364-843 947-1453(1490)
95 TIGR00954 3a01203 Peroxysomal 100.0 8.8E-56 1.9E-60 567.6 56.1 511 927-1455 98-653 (659)
96 PRK13409 putative ATPase RIL; 100.0 3E-57 6.5E-62 570.7 38.3 191 1245-1463 340-536 (590)
97 PRK10522 multidrug transporter 100.0 6.5E-54 1.4E-58 543.4 65.2 508 291-822 3-530 (547)
98 KOG0054 Multidrug resistance-a 100.0 1.1E-53 2.4E-58 556.2 62.4 491 974-1483 251-744 (1381)
99 COG1129 MglA ABC-type sugar tr 100.0 2.6E-55 5.7E-60 522.7 41.2 444 616-1466 7-487 (500)
100 TIGR00954 3a01203 Peroxysomal 100.0 1.2E-51 2.6E-56 529.5 59.4 503 302-816 97-653 (659)
101 COG3845 ABC-type uncharacteriz 100.0 7.8E-54 1.7E-58 497.8 34.5 440 616-1466 3-489 (501)
102 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.8E-54 6.1E-59 496.2 26.4 238 1244-1483 1-238 (275)
103 COG5265 ATM1 ABC-type transpor 100.0 1.8E-51 3.8E-56 465.6 40.4 468 369-839 9-495 (497)
104 PRK14257 phosphate ABC transpo 100.0 2.3E-50 5E-55 475.4 25.1 258 1209-1473 35-317 (329)
105 KOG0927 Predicted transporter 100.0 6.6E-46 1.4E-50 431.6 28.1 193 1245-1461 389-587 (614)
106 COG1135 AbcC ABC-type metal io 100.0 1.4E-45 3.1E-50 406.4 21.3 225 1246-1481 2-244 (339)
107 cd03288 ABCC_SUR2 The SUR doma 100.0 1.4E-44 3E-49 415.0 28.0 240 1242-1481 16-255 (257)
108 COG1126 GlnQ ABC-type polar am 100.0 9.4E-45 2E-49 381.6 20.9 216 1245-1473 2-229 (240)
109 PRK14257 phosphate ABC transpo 100.0 4.9E-44 1.1E-48 421.7 24.5 264 550-831 22-314 (329)
110 cd03252 ABCC_Hemolysin The ABC 100.0 1.8E-43 3.8E-48 401.5 25.9 234 1246-1480 1-235 (237)
111 COG1126 GlnQ ABC-type polar am 100.0 8.4E-44 1.8E-48 374.4 20.0 203 617-833 2-228 (240)
112 cd03244 ABCC_MRP_domain2 Domai 100.0 2.6E-43 5.6E-48 395.9 25.4 221 1244-1464 1-221 (221)
113 COG1117 PstB ABC-type phosphat 100.0 1.6E-43 3.4E-48 370.0 17.4 220 1244-1472 6-240 (253)
114 COG1125 OpuBA ABC-type proline 100.0 1.1E-42 2.3E-47 372.0 19.2 217 1246-1475 2-231 (309)
115 KOG0062 ATPase component of AB 100.0 9.9E-42 2.2E-46 394.9 28.4 194 1242-1461 359-560 (582)
116 cd03251 ABCC_MsbA MsbA is an e 100.0 5.6E-42 1.2E-46 388.4 25.7 231 1246-1477 1-232 (234)
117 cd03369 ABCC_NFT1 Domain 2 of 100.0 5.5E-42 1.2E-46 381.1 24.8 207 1240-1464 1-207 (207)
118 cd03254 ABCC_Glucan_exporter_l 100.0 1.1E-41 2.3E-46 384.9 24.8 226 1244-1470 1-227 (229)
119 cd03253 ABCC_ATM1_transporter 100.0 1.7E-41 3.6E-46 385.1 26.4 233 1246-1480 1-234 (236)
120 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.9E-41 6.3E-46 383.6 25.7 233 1246-1479 1-235 (238)
121 TIGR02314 ABC_MetN D-methionin 100.0 1.7E-41 3.6E-46 400.6 24.2 223 1246-1479 2-241 (343)
122 cd03245 ABCC_bacteriocin_expor 100.0 4.9E-41 1.1E-45 377.1 24.9 219 1244-1462 1-220 (220)
123 cd03260 ABC_PstB_phosphate_tra 100.0 3.7E-41 7.9E-46 380.0 21.6 211 1246-1467 1-227 (227)
124 COG1124 DppF ABC-type dipeptid 100.0 4.5E-41 9.7E-46 361.6 21.0 225 1245-1480 3-242 (252)
125 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.1E-40 2.5E-45 383.5 25.5 222 617-841 2-236 (275)
126 PRK13631 cbiO cobalt transport 100.0 5.1E-41 1.1E-45 395.0 23.0 218 1243-1470 19-266 (320)
127 COG1116 TauB ABC-type nitrate/ 100.0 3.3E-41 7.3E-46 366.7 19.6 190 617-820 3-212 (248)
128 COG1127 Ttg2A ABC-type transpo 100.0 1.1E-40 2.4E-45 356.2 22.1 223 1244-1479 7-245 (263)
129 COG1120 FepC ABC-type cobalami 100.0 6.4E-41 1.4E-45 372.2 20.2 213 1245-1470 2-229 (258)
130 PRK14269 phosphate ABC transpo 100.0 2.1E-40 4.7E-45 378.1 25.0 219 1245-1472 2-233 (246)
131 COG1122 CbiO ABC-type cobalt t 100.0 1E-40 2.3E-45 371.4 21.0 215 1245-1471 3-230 (235)
132 COG1125 OpuBA ABC-type proline 100.0 6.4E-41 1.4E-45 358.4 18.2 203 618-832 2-227 (309)
133 KOG0065 Pleiotropic drug resis 100.0 3.8E-39 8.2E-44 409.1 37.6 199 1258-1466 802-1018(1391)
134 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-40 3.1E-45 377.1 22.0 212 1246-1470 1-227 (235)
135 PRK14250 phosphate ABC transpo 100.0 4.8E-40 1E-44 374.0 25.6 221 1245-1478 3-230 (241)
136 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.8E-40 4E-45 366.5 20.8 209 1245-1470 4-228 (254)
137 cd03248 ABCC_TAP TAP, the Tran 100.0 2.9E-40 6.4E-45 372.4 22.9 217 1242-1458 8-226 (226)
138 COG1135 AbcC ABC-type metal io 100.0 1.3E-40 2.9E-45 367.2 19.2 207 618-832 2-233 (339)
139 PRK13650 cbiO cobalt transport 100.0 3.2E-40 7E-45 382.9 23.3 215 1245-1470 4-230 (279)
140 COG3839 MalK ABC-type sugar tr 100.0 3E-40 6.6E-45 380.3 22.1 216 1245-1475 3-229 (338)
141 PRK10744 pstB phosphate transp 100.0 1E-39 2.2E-44 375.6 25.3 221 1243-1472 11-247 (260)
142 COG2884 FtsE Predicted ATPase 100.0 2.3E-40 5E-45 340.4 17.5 207 1246-1464 2-221 (223)
143 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.9E-40 1.5E-44 361.9 22.6 200 616-831 3-228 (254)
144 cd03250 ABCC_MRP_domain1 Domai 100.0 7E-40 1.5E-44 363.4 22.8 199 1246-1457 1-204 (204)
145 PRK11153 metN DL-methionine tr 100.0 6.2E-40 1.3E-44 390.2 23.7 220 1246-1476 2-237 (343)
146 PRK14242 phosphate transporter 100.0 1.1E-39 2.3E-44 374.1 24.3 219 1245-1472 6-240 (253)
147 PRK14273 phosphate ABC transpo 100.0 1.2E-39 2.5E-44 374.0 24.5 222 1245-1475 7-244 (254)
148 cd03263 ABC_subfamily_A The AB 100.0 5.8E-40 1.3E-44 368.4 21.3 210 1246-1467 1-219 (220)
149 PRK13637 cbiO cobalt transport 100.0 7.8E-40 1.7E-44 381.0 23.0 215 1245-1470 2-235 (287)
150 PRK11650 ugpC glycerol-3-phosp 100.0 1.3E-39 2.8E-44 387.7 24.6 217 1245-1475 3-230 (356)
151 COG1127 Ttg2A ABC-type transpo 100.0 1.6E-39 3.6E-44 347.2 22.6 207 615-836 6-241 (263)
152 COG1120 FepC ABC-type cobalami 100.0 7.8E-40 1.7E-44 363.6 20.9 201 617-831 2-229 (258)
153 PRK13635 cbiO cobalt transport 100.0 1.3E-39 2.8E-44 377.6 23.6 215 1245-1470 5-230 (279)
154 PRK14259 phosphate ABC transpo 100.0 2.4E-39 5.2E-44 373.8 25.6 223 1241-1472 9-256 (269)
155 TIGR00972 3a0107s01c2 phosphat 100.0 1.9E-39 4.1E-44 370.7 24.4 221 1246-1475 2-238 (247)
156 PRK13647 cbiO cobalt transport 100.0 1.1E-39 2.3E-44 377.5 22.7 212 1245-1468 4-226 (274)
157 cd03291 ABCC_CFTR1 The CFTR su 100.0 5.1E-39 1.1E-43 371.1 27.9 218 1243-1478 37-255 (282)
158 PRK11432 fbpC ferric transport 100.0 1.5E-39 3.3E-44 386.0 24.0 217 1244-1475 5-232 (351)
159 PRK14267 phosphate ABC transpo 100.0 1.6E-39 3.4E-44 372.8 23.3 219 1245-1472 4-240 (253)
160 cd03296 ABC_CysA_sulfate_impor 100.0 1.9E-39 4.2E-44 368.7 23.7 213 1245-1472 2-229 (239)
161 cd03256 ABC_PhnC_transporter A 100.0 1.3E-39 2.8E-44 370.9 22.1 211 1246-1468 1-233 (241)
162 PRK14235 phosphate transporter 100.0 2.7E-39 5.9E-44 373.1 25.0 222 1242-1472 16-254 (267)
163 TIGR00960 3a0501s02 Type II (G 100.0 9.6E-40 2.1E-44 365.6 20.6 202 1246-1458 2-216 (216)
164 PRK14247 phosphate ABC transpo 100.0 2.5E-39 5.4E-44 370.4 24.2 223 1245-1476 3-241 (250)
165 TIGR01186 proV glycine betaine 100.0 9.5E-40 2.1E-44 387.6 21.3 205 1260-1475 6-225 (363)
166 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-39 2.9E-44 369.5 21.5 212 1246-1470 1-233 (236)
167 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.9E-39 4.1E-44 369.5 22.2 215 1246-1472 1-228 (242)
168 COG4178 ABC-type uncharacteriz 100.0 1.3E-36 2.8E-41 369.3 48.0 467 966-1455 87-588 (604)
169 cd03258 ABC_MetN_methionine_tr 100.0 1.7E-39 3.6E-44 368.0 21.5 214 1246-1470 2-231 (233)
170 COG3638 ABC-type phosphate/pho 100.0 1.4E-39 3.1E-44 346.8 19.5 212 1245-1468 3-236 (258)
171 cd03247 ABCC_cytochrome_bd The 100.0 1.8E-39 4E-44 352.0 20.6 178 1246-1462 1-178 (178)
172 TIGR03265 PhnT2 putative 2-ami 100.0 2.1E-39 4.5E-44 385.6 22.9 217 1245-1476 4-231 (353)
173 PRK13646 cbiO cobalt transport 100.0 2.5E-39 5.5E-44 376.7 23.0 216 1245-1470 2-236 (286)
174 PRK14237 phosphate transporter 100.0 4.4E-39 9.4E-44 371.4 24.7 220 1244-1472 19-254 (267)
175 COG1136 SalX ABC-type antimicr 100.0 4.4E-39 9.5E-44 350.9 23.2 204 1246-1460 2-222 (226)
176 PRK14244 phosphate ABC transpo 100.0 1.8E-39 4E-44 371.7 21.2 222 1245-1475 5-243 (251)
177 COG1117 PstB ABC-type phosphat 100.0 6.7E-40 1.4E-44 342.8 15.9 206 616-832 6-239 (253)
178 PRK14251 phosphate ABC transpo 100.0 2.9E-39 6.3E-44 370.1 22.7 222 1245-1475 4-241 (251)
179 PRK14245 phosphate ABC transpo 100.0 3.4E-39 7.4E-44 369.2 23.1 220 1245-1473 3-238 (250)
180 TIGR02315 ABC_phnC phosphonate 100.0 2.7E-39 5.8E-44 368.7 22.1 211 1246-1468 2-234 (243)
181 PRK13640 cbiO cobalt transport 100.0 5.1E-39 1.1E-43 373.4 24.7 216 1244-1470 4-233 (282)
182 PRK13643 cbiO cobalt transport 100.0 3.3E-39 7.2E-44 375.9 22.9 214 1246-1470 2-234 (288)
183 PRK14262 phosphate ABC transpo 100.0 4.9E-39 1.1E-43 368.0 23.9 224 1245-1477 3-242 (250)
184 PRK10851 sulfate/thiosulfate t 100.0 4.8E-39 1E-43 382.5 24.5 216 1245-1475 2-232 (353)
185 PRK14268 phosphate ABC transpo 100.0 5E-39 1.1E-43 369.4 23.7 223 1244-1475 11-248 (258)
186 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.2E-38 4.8E-43 365.8 29.2 217 614-835 36-252 (282)
187 PRK13632 cbiO cobalt transport 100.0 5E-39 1.1E-43 371.7 23.9 215 1245-1470 7-232 (271)
188 PRK14266 phosphate ABC transpo 100.0 5.3E-39 1.1E-43 367.7 23.8 223 1245-1476 3-241 (250)
189 PRK14256 phosphate ABC transpo 100.0 7.3E-39 1.6E-43 366.9 24.9 223 1243-1474 2-241 (252)
190 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.7E-39 1.2E-43 364.2 23.7 211 1246-1470 2-222 (236)
191 cd03259 ABC_Carb_Solutes_like 100.0 2.4E-39 5.2E-44 361.6 20.2 202 1246-1462 1-213 (213)
192 PRK13636 cbiO cobalt transport 100.0 4.1E-39 8.9E-44 374.4 22.9 214 1245-1470 5-232 (283)
193 PRK14239 phosphate transporter 100.0 6.6E-39 1.4E-43 367.4 24.3 219 1245-1472 5-239 (252)
194 cd03224 ABC_TM1139_LivF_branch 100.0 3.7E-39 8.1E-44 362.4 21.6 212 1246-1469 1-221 (222)
195 PRK11629 lolD lipoprotein tran 100.0 4.8E-39 1E-43 364.1 22.6 208 1245-1463 5-228 (233)
196 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3E-39 6.4E-44 373.0 21.1 217 1247-1476 26-257 (269)
197 PRK14274 phosphate ABC transpo 100.0 8.6E-39 1.9E-43 367.7 24.6 221 1245-1474 12-248 (259)
198 PRK10619 histidine/lysine/argi 100.0 7.5E-39 1.6E-43 367.8 23.9 218 1243-1472 3-244 (257)
199 PRK14248 phosphate ABC transpo 100.0 9.9E-39 2.1E-43 369.0 25.0 219 1245-1472 21-255 (268)
200 PRK14240 phosphate transporter 100.0 9.1E-39 2E-43 365.8 24.3 222 1244-1474 2-239 (250)
201 COG3839 MalK ABC-type sugar tr 100.0 3.8E-39 8.3E-44 371.2 21.1 202 617-832 3-225 (338)
202 PRK14260 phosphate ABC transpo 100.0 7.8E-39 1.7E-43 368.0 23.7 221 1244-1473 6-247 (259)
203 PRK11308 dppF dipeptide transp 100.0 1.1E-38 2.4E-43 376.3 25.5 224 1245-1478 5-253 (327)
204 PRK13652 cbiO cobalt transport 100.0 7.9E-39 1.7E-43 371.1 23.9 214 1245-1470 3-228 (277)
205 PRK15079 oligopeptide ABC tran 100.0 9.3E-39 2E-43 377.2 24.8 222 1245-1477 8-259 (331)
206 COG4615 PvdE ABC-type sideroph 100.0 4E-36 8.7E-41 336.5 44.3 467 969-1461 52-529 (546)
207 cd03265 ABC_DrrA DrrA is the A 100.0 6.6E-39 1.4E-43 359.8 22.2 208 1246-1467 1-219 (220)
208 cd03266 ABC_NatA_sodium_export 100.0 6.2E-39 1.4E-43 359.6 22.0 205 1246-1462 2-218 (218)
209 PRK13642 cbiO cobalt transport 100.0 9.4E-39 2E-43 370.4 24.0 215 1245-1470 4-230 (277)
210 PRK13537 nodulation ABC transp 100.0 6.3E-39 1.4E-43 376.0 22.7 213 1244-1470 6-228 (306)
211 PRK14249 phosphate ABC transpo 100.0 1.2E-38 2.7E-43 364.8 24.6 219 1245-1472 4-238 (251)
212 PRK14236 phosphate transporter 100.0 1.4E-38 3.1E-43 368.1 25.3 221 1242-1471 22-258 (272)
213 TIGR03005 ectoine_ehuA ectoine 100.0 8.9E-39 1.9E-43 366.2 23.4 215 1246-1473 1-240 (252)
214 PRK09536 btuD corrinoid ABC tr 100.0 7.5E-39 1.6E-43 384.3 23.7 220 1245-1479 3-236 (402)
215 TIGR03258 PhnT 2-aminoethylpho 100.0 6.5E-39 1.4E-43 381.7 23.0 218 1243-1475 3-234 (362)
216 cd03252 ABCC_Hemolysin The ABC 100.0 2E-38 4.3E-43 360.1 25.8 218 618-837 1-232 (237)
217 cd03226 ABC_cobalt_CbiO_domain 100.0 5.3E-39 1.2E-43 356.6 20.6 198 1247-1459 1-205 (205)
218 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.4E-39 9.5E-44 360.8 20.0 202 1246-1458 1-218 (218)
219 PRK11000 maltose/maltodextrin 100.0 7.2E-39 1.6E-43 384.0 23.1 216 1245-1475 3-229 (369)
220 PRK09452 potA putrescine/sperm 100.0 1.1E-38 2.4E-43 381.0 24.5 217 1244-1475 13-240 (375)
221 PRK14254 phosphate ABC transpo 100.0 1.8E-38 4E-43 368.9 25.7 221 1243-1472 37-272 (285)
222 cd03250 ABCC_MRP_domain1 Domai 100.0 1.3E-38 2.9E-43 353.1 23.4 201 618-818 1-204 (204)
223 PRK11022 dppD dipeptide transp 100.0 1.4E-38 3E-43 375.7 24.9 227 1245-1479 3-253 (326)
224 PRK13634 cbiO cobalt transport 100.0 9.2E-39 2E-43 372.5 23.1 216 1245-1470 2-236 (290)
225 PRK13651 cobalt transporter AT 100.0 1E-38 2.2E-43 373.5 23.4 215 1245-1470 2-255 (305)
226 TIGR03411 urea_trans_UrtD urea 100.0 1E-38 2.3E-43 363.5 22.8 212 1245-1469 2-231 (242)
227 PRK14238 phosphate transporter 100.0 1.4E-38 3.1E-43 367.8 24.1 223 1242-1473 21-259 (271)
228 PRK14270 phosphate ABC transpo 100.0 1.6E-38 3.4E-43 364.0 24.2 218 1245-1471 4-237 (251)
229 PRK13648 cbiO cobalt transport 100.0 1.1E-38 2.3E-43 368.8 23.0 215 1245-1470 7-232 (269)
230 PRK14252 phosphate ABC transpo 100.0 1.4E-38 3.1E-43 367.1 24.0 222 1241-1471 12-251 (265)
231 cd03290 ABCC_SUR1_N The SUR do 100.0 1.2E-38 2.6E-43 357.2 22.7 211 1246-1457 1-218 (218)
232 cd03268 ABC_BcrA_bacitracin_re 100.0 7.9E-39 1.7E-43 356.1 21.0 202 1246-1462 1-208 (208)
233 PRK11831 putative ABC transpor 100.0 1.2E-38 2.7E-43 368.1 23.4 223 1245-1480 7-244 (269)
234 COG3842 PotA ABC-type spermidi 100.0 4E-39 8.7E-44 372.9 19.2 203 616-832 4-228 (352)
235 PRK13644 cbiO cobalt transport 100.0 1.3E-38 2.8E-43 368.5 23.4 213 1246-1470 2-225 (274)
236 cd03264 ABC_drug_resistance_li 100.0 7.3E-39 1.6E-43 357.2 20.4 202 1246-1462 1-211 (211)
237 COG1116 TauB ABC-type nitrate/ 100.0 1.4E-38 3E-43 346.2 21.7 221 1245-1484 3-239 (248)
238 cd03300 ABC_PotA_N PotA is an 100.0 1.1E-38 2.5E-43 360.7 22.0 211 1246-1471 1-222 (232)
239 COG3840 ThiQ ABC-type thiamine 100.0 8.4E-39 1.8E-43 325.7 18.7 211 1246-1473 2-223 (231)
240 PRK11124 artP arginine transpo 100.0 1.5E-38 3.2E-43 362.3 22.9 214 1245-1471 2-232 (242)
241 PRK13633 cobalt transporter AT 100.0 1.5E-38 3.3E-43 369.3 23.5 215 1245-1470 4-234 (280)
242 PRK14243 phosphate transporter 100.0 2.1E-38 4.5E-43 365.2 24.4 219 1245-1472 10-251 (264)
243 TIGR02211 LolD_lipo_ex lipopro 100.0 1.4E-38 3.1E-43 357.4 22.5 203 1246-1459 2-220 (221)
244 PRK09493 glnQ glutamine ABC tr 100.0 1.4E-38 3E-43 362.0 22.5 213 1246-1471 2-227 (240)
245 COG1118 CysA ABC-type sulfate/ 100.0 4.8E-39 1E-43 353.6 17.9 202 617-832 2-229 (345)
246 PRK10575 iron-hydroxamate tran 100.0 1.3E-38 2.8E-43 367.2 22.3 212 1245-1469 11-237 (265)
247 TIGR02769 nickel_nikE nickel i 100.0 2.4E-38 5.2E-43 365.0 24.4 225 1245-1479 2-250 (265)
248 PRK11264 putative amino-acid A 100.0 2.2E-38 4.7E-43 362.8 23.7 215 1245-1472 3-236 (250)
249 PRK14261 phosphate ABC transpo 100.0 2.6E-38 5.7E-43 362.6 24.1 224 1245-1477 6-245 (253)
250 PRK14258 phosphate ABC transpo 100.0 2.6E-38 5.7E-43 363.9 23.9 222 1244-1474 6-250 (261)
251 PRK14263 phosphate ABC transpo 100.0 3.2E-38 7E-43 362.6 24.6 220 1245-1473 8-249 (261)
252 cd03218 ABC_YhbG The ABC trans 100.0 1.2E-38 2.6E-43 360.7 20.8 211 1246-1469 1-222 (232)
253 cd03225 ABC_cobalt_CbiO_domain 100.0 9.2E-39 2E-43 356.4 19.5 200 1247-1457 1-211 (211)
254 PRK09473 oppD oligopeptide tra 100.0 2.4E-38 5.2E-43 373.9 24.1 227 1245-1479 12-261 (330)
255 PRK11231 fecE iron-dicitrate t 100.0 1.6E-38 3.5E-43 364.6 22.0 211 1246-1469 3-227 (255)
256 cd03292 ABC_FtsE_transporter F 100.0 1.2E-38 2.6E-43 356.3 20.2 201 1246-1458 1-214 (214)
257 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.1E-38 2.3E-43 358.1 19.8 203 1246-1464 1-218 (220)
258 cd03246 ABCC_Protease_Secretio 100.0 1.7E-38 3.8E-43 342.7 20.6 172 1246-1458 1-173 (173)
259 PRK14271 phosphate ABC transpo 100.0 4E-38 8.8E-43 364.6 25.1 219 1245-1472 21-254 (276)
260 cd03301 ABC_MalK_N The N-termi 100.0 1.3E-38 2.7E-43 355.8 20.0 202 1246-1462 1-213 (213)
261 PRK14241 phosphate transporter 100.0 2.8E-38 6.2E-43 363.2 23.3 219 1245-1472 4-245 (258)
262 COG1136 SalX ABC-type antimicr 100.0 2.9E-38 6.3E-43 344.5 22.0 193 618-820 2-221 (226)
263 PRK14265 phosphate ABC transpo 100.0 4.8E-38 1E-42 363.7 25.2 220 1244-1472 19-261 (274)
264 PRK11614 livF leucine/isoleuci 100.0 2.8E-38 6E-43 358.8 22.7 212 1245-1469 5-226 (237)
265 cd03299 ABC_ModC_like Archeal 100.0 2.5E-38 5.4E-43 358.5 22.2 210 1246-1471 1-221 (235)
266 PRK13649 cbiO cobalt transport 100.0 2.8E-38 6E-43 367.6 23.1 215 1246-1470 3-235 (280)
267 TIGR02673 FtsE cell division A 100.0 1.3E-38 2.8E-43 356.0 19.5 200 1246-1457 2-214 (214)
268 PRK14253 phosphate ABC transpo 100.0 4.2E-38 9E-43 360.1 24.0 219 1245-1472 3-236 (249)
269 PRK10070 glycine betaine trans 100.0 2.6E-38 5.6E-43 379.5 23.1 204 1261-1475 42-260 (400)
270 PRK13641 cbiO cobalt transport 100.0 4E-38 8.7E-43 366.8 24.1 215 1245-1470 2-235 (287)
271 PRK13645 cbiO cobalt transport 100.0 2.6E-38 5.7E-43 369.2 22.5 218 1243-1470 4-241 (289)
272 TIGR03410 urea_trans_UrtE urea 100.0 2.8E-38 6.1E-43 357.2 21.9 211 1246-1468 1-220 (230)
273 PRK10253 iron-enterobactin tra 100.0 2.9E-38 6.3E-43 364.3 22.4 213 1244-1469 6-233 (265)
274 PRK14264 phosphate ABC transpo 100.0 5.1E-38 1.1E-42 368.7 24.8 220 1243-1471 43-291 (305)
275 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 7.1E-38 1.5E-42 355.8 25.2 214 618-832 1-228 (238)
276 PRK11607 potG putrescine trans 100.0 3.7E-38 8E-43 377.3 24.0 218 1244-1476 18-246 (377)
277 PRK14255 phosphate ABC transpo 100.0 4.2E-38 9.1E-43 360.8 23.4 222 1245-1475 5-242 (252)
278 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.5E-38 7.6E-43 351.7 22.0 200 1246-1462 1-211 (211)
279 PRK14275 phosphate ABC transpo 100.0 5.1E-38 1.1E-42 365.5 24.1 224 1243-1475 37-276 (286)
280 TIGR01288 nodI ATP-binding ABC 100.0 3.5E-38 7.6E-43 370.2 22.9 212 1245-1470 4-225 (303)
281 PRK15112 antimicrobial peptide 100.0 4.3E-38 9.3E-43 363.2 23.1 229 1245-1483 4-254 (267)
282 COG3840 ThiQ ABC-type thiamine 100.0 2.4E-38 5.2E-43 322.3 18.4 197 618-831 2-220 (231)
283 PRK14272 phosphate ABC transpo 100.0 5.8E-38 1.3E-42 359.7 23.8 223 1245-1476 4-243 (252)
284 PRK10895 lipopolysaccharide AB 100.0 4.7E-38 1E-42 357.9 23.0 213 1245-1470 3-227 (241)
285 PRK10584 putative ABC transpor 100.0 5.3E-38 1.1E-42 354.5 23.1 206 1245-1461 6-227 (228)
286 PRK13548 hmuV hemin importer A 100.0 6.2E-38 1.3E-42 360.0 23.8 212 1245-1469 2-230 (258)
287 PRK11247 ssuB aliphatic sulfon 100.0 5.5E-38 1.2E-42 359.0 23.3 203 1245-1465 12-219 (257)
288 TIGR00968 3a0106s01 sulfate AB 100.0 5.7E-38 1.2E-42 356.0 23.1 210 1246-1470 1-221 (237)
289 COG3842 PotA ABC-type spermidi 100.0 2.6E-38 5.6E-43 366.2 20.1 217 1244-1475 4-232 (352)
290 PRK13639 cbiO cobalt transport 100.0 5.7E-38 1.2E-42 363.6 23.1 213 1246-1470 2-227 (275)
291 cd03251 ABCC_MsbA MsbA is an e 100.0 1.5E-37 3.3E-42 352.3 25.9 214 618-833 1-228 (234)
292 PRK13536 nodulation factor exp 100.0 4.7E-38 1E-42 372.2 22.7 212 1245-1470 41-262 (340)
293 cd03288 ABCC_SUR2 The SUR doma 100.0 2E-37 4.4E-42 355.7 26.8 216 615-832 17-245 (257)
294 cd03254 ABCC_Glucan_exporter_l 100.0 1.3E-37 2.8E-42 351.6 24.8 211 617-830 2-226 (229)
295 cd03253 ABCC_ATM1_transporter 100.0 1.6E-37 3.5E-42 352.4 25.7 214 618-834 1-228 (236)
296 PRK13638 cbiO cobalt transport 100.0 5.1E-38 1.1E-42 363.5 21.9 212 1246-1470 2-226 (271)
297 cd03235 ABC_Metallic_Cations A 100.0 2.9E-38 6.3E-43 352.8 19.1 197 1247-1462 1-213 (213)
298 PRK15093 antimicrobial peptide 100.0 1E-37 2.2E-42 369.6 24.7 226 1245-1478 3-257 (330)
299 PRK10771 thiQ thiamine transpo 100.0 1.2E-37 2.6E-42 352.4 24.2 208 1246-1470 2-220 (232)
300 TIGR03522 GldA_ABC_ATP gliding 100.0 8E-38 1.7E-42 366.6 23.3 211 1246-1470 3-222 (301)
301 PRK11300 livG leucine/isoleuci 100.0 7.7E-38 1.7E-42 359.3 22.7 213 1245-1470 5-244 (255)
302 PRK10418 nikD nickel transport 100.0 1.2E-37 2.7E-42 357.0 24.2 223 1245-1480 4-242 (254)
303 PRK10247 putative ABC transpor 100.0 7.4E-38 1.6E-42 352.3 21.6 209 1245-1465 7-223 (225)
304 cd03269 ABC_putative_ATPase Th 100.0 4E-38 8.7E-43 350.9 19.1 200 1246-1462 1-210 (210)
305 COG1131 CcmA ABC-type multidru 100.0 8E-38 1.7E-42 363.1 22.3 213 1245-1470 4-227 (293)
306 cd03257 ABC_NikE_OppD_transpor 100.0 1.2E-37 2.5E-42 351.8 22.9 207 1246-1462 2-228 (228)
307 PRK10908 cell division protein 100.0 9.6E-38 2.1E-42 350.9 22.1 203 1246-1460 2-217 (222)
308 TIGR03873 F420-0_ABC_ATP propo 100.0 8.9E-38 1.9E-42 358.7 22.3 211 1246-1469 2-226 (256)
309 PRK14246 phosphate ABC transpo 100.0 1.4E-37 3E-42 356.6 23.6 223 1245-1476 10-248 (257)
310 cd03244 ABCC_MRP_domain2 Domai 100.0 2.5E-37 5.3E-42 347.4 24.7 206 617-824 2-220 (221)
311 TIGR03415 ABC_choXWV_ATP choli 100.0 1E-37 2.2E-42 371.7 22.7 204 1261-1475 38-260 (382)
312 COG3638 ABC-type phosphate/pho 100.0 4.7E-38 1E-42 335.3 17.6 203 617-829 3-236 (258)
313 COG1122 CbiO ABC-type cobalt t 100.0 9E-38 2E-42 347.9 20.5 202 617-831 3-229 (235)
314 TIGR01277 thiQ thiamine ABC tr 100.0 1.2E-37 2.7E-42 347.7 21.6 201 1246-1463 1-212 (213)
315 cd03262 ABC_HisP_GlnQ_permease 100.0 7.4E-38 1.6E-42 349.6 19.6 200 1246-1458 1-213 (213)
316 PRK11701 phnK phosphonate C-P 100.0 2.6E-37 5.7E-42 355.3 24.5 222 1245-1478 6-250 (258)
317 COG4615 PvdE ABC-type sideroph 100.0 2.1E-34 4.7E-39 322.7 45.9 505 292-822 4-529 (546)
318 TIGR01188 drrA daunorubicin re 100.0 1.2E-37 2.6E-42 365.5 20.8 203 1254-1470 2-214 (302)
319 PRK11144 modC molybdate transp 100.0 2.2E-37 4.7E-42 369.6 23.4 213 1246-1474 2-223 (352)
320 TIGR01978 sufC FeS assembly AT 100.0 1.6E-37 3.4E-42 354.2 20.9 212 1246-1468 1-233 (243)
321 PRK11650 ugpC glycerol-3-phosp 100.0 2.5E-37 5.4E-42 368.3 23.4 203 617-832 3-226 (356)
322 TIGR02314 ABC_MetN D-methionin 100.0 2E-37 4.3E-42 366.1 21.9 203 618-831 2-231 (343)
323 PRK13547 hmuV hemin importer A 100.0 3.7E-37 8E-42 355.1 23.3 211 1246-1469 2-244 (272)
324 PRK00349 uvrA excinuclease ABC 100.0 1.2E-36 2.7E-41 394.1 30.4 228 1245-1481 614-939 (943)
325 TIGR01186 proV glycine betaine 100.0 1.7E-37 3.6E-42 368.5 20.2 190 632-832 5-221 (363)
326 cd03261 ABC_Org_Solvent_Resist 100.0 3.3E-37 7.2E-42 349.6 21.8 200 618-831 1-227 (235)
327 PRK13631 cbiO cobalt transport 100.0 4.9E-37 1.1E-41 361.3 24.0 210 616-831 20-266 (320)
328 COG1124 DppF ABC-type dipeptid 100.0 3.8E-37 8.3E-42 331.3 20.9 205 617-831 3-232 (252)
329 cd03245 ABCC_bacteriocin_expor 100.0 9.1E-37 2E-41 342.6 24.2 205 617-823 2-220 (220)
330 PRK09984 phosphonate/organopho 100.0 6.1E-37 1.3E-41 353.0 23.3 210 1245-1467 4-240 (262)
331 cd03228 ABCC_MRP_Like The MRP 100.0 4.2E-37 9.2E-42 331.2 20.2 171 1246-1457 1-171 (171)
332 PRK11248 tauB taurine transpor 100.0 4.2E-37 9.1E-42 352.2 21.3 201 1246-1464 2-215 (255)
333 COG4178 ABC-type uncharacteriz 100.0 1.2E-33 2.5E-38 343.6 52.2 446 360-815 104-587 (604)
334 COG0410 LivF ABC-type branched 100.0 3.7E-37 8E-42 329.4 19.0 220 1245-1471 3-228 (237)
335 TIGR02982 heterocyst_DevA ABC 100.0 3.2E-37 7E-42 346.1 19.3 202 1246-1458 2-219 (220)
336 PRK11432 fbpC ferric transport 100.0 7.5E-37 1.6E-41 363.1 23.1 202 617-832 6-228 (351)
337 TIGR03740 galliderm_ABC gallid 100.0 1.2E-36 2.7E-41 342.2 23.2 204 1246-1466 1-210 (223)
338 cd03229 ABC_Class3 This class 100.0 7E-37 1.5E-41 331.7 20.0 172 1246-1457 1-178 (178)
339 PRK10419 nikE nickel transport 100.0 1.4E-36 3.1E-41 350.6 23.7 221 1245-1476 3-247 (268)
340 TIGR02142 modC_ABC molybdenum 100.0 8E-37 1.7E-41 365.4 22.4 212 1250-1476 4-228 (354)
341 cd03230 ABC_DR_subfamily_A Thi 100.0 7E-37 1.5E-41 330.2 19.6 170 1246-1458 1-173 (173)
342 PRK13634 cbiO cobalt transport 100.0 1.2E-36 2.5E-41 354.9 22.7 203 618-831 3-236 (290)
343 PRK13643 cbiO cobalt transport 100.0 1.3E-36 2.8E-41 354.1 22.9 202 618-830 2-233 (288)
344 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.1E-36 2.5E-41 336.3 21.1 185 1246-1468 1-192 (200)
345 PRK13637 cbiO cobalt transport 100.0 1.3E-36 2.7E-41 354.1 22.4 204 617-830 2-234 (287)
346 TIGR03265 PhnT2 putative 2-ami 100.0 1.2E-36 2.5E-41 362.1 22.4 202 617-832 4-226 (353)
347 TIGR02323 CP_lyasePhnK phospho 100.0 3E-36 6.4E-41 345.7 24.9 222 1245-1478 3-247 (253)
348 PRK09452 potA putrescine/sperm 100.0 1.8E-36 3.9E-41 362.1 23.5 203 616-832 13-236 (375)
349 PRK09544 znuC high-affinity zi 100.0 2.7E-36 5.8E-41 344.3 23.6 208 1245-1479 4-217 (251)
350 cd03296 ABC_CysA_sulfate_impor 100.0 2.3E-36 5E-41 343.5 23.0 198 618-830 3-226 (239)
351 COG2884 FtsE Predicted ATPase 100.0 9.4E-37 2E-41 313.8 17.3 193 618-823 2-219 (223)
352 PRK13650 cbiO cobalt transport 100.0 3E-36 6.6E-41 349.7 23.5 203 617-831 4-230 (279)
353 COG0444 DppD ABC-type dipeptid 100.0 2.3E-36 5E-41 339.7 21.6 226 1246-1482 2-256 (316)
354 PRK10851 sulfate/thiosulfate t 100.0 2.6E-36 5.6E-41 359.1 23.3 202 617-832 2-228 (353)
355 cd03290 ABCC_SUR1_N The SUR do 100.0 3.6E-36 7.9E-41 337.1 23.2 198 619-818 2-218 (218)
356 PRK13651 cobalt transporter AT 100.0 2.9E-36 6.3E-41 352.7 23.3 203 618-831 3-255 (305)
357 TIGR03258 PhnT 2-aminoethylpho 100.0 1.9E-36 4.2E-41 360.6 21.9 203 616-832 4-230 (362)
358 cd03234 ABCG_White The White s 100.0 2E-36 4.4E-41 341.0 20.9 203 1246-1462 4-226 (226)
359 COG1137 YhbG ABC-type (unclass 100.0 1.2E-37 2.7E-42 322.2 10.0 215 1244-1471 3-230 (243)
360 cd03233 ABC_PDR_domain1 The pl 100.0 1.8E-36 4E-41 335.0 20.1 190 1245-1462 3-202 (202)
361 cd03219 ABC_Mj1267_LivG_branch 100.0 2E-36 4.4E-41 343.5 20.8 203 618-830 1-232 (236)
362 cd03260 ABC_PstB_phosphate_tra 100.0 2E-36 4.4E-41 341.4 20.6 195 618-827 1-226 (227)
363 COG1118 CysA ABC-type sulfate/ 100.0 1.2E-36 2.6E-41 334.8 18.1 216 1245-1475 2-233 (345)
364 cd03215 ABC_Carb_Monos_II This 100.0 1.3E-36 2.8E-41 330.9 18.3 172 1245-1458 4-182 (182)
365 PRK11000 maltose/maltodextrin 100.0 2.7E-36 5.8E-41 361.8 22.8 201 617-831 3-224 (369)
366 cd03213 ABCG_EPDR ABCG transpo 100.0 1.6E-36 3.4E-41 333.4 19.0 182 1245-1462 3-194 (194)
367 PRK13646 cbiO cobalt transport 100.0 2.7E-36 5.8E-41 351.4 22.1 204 617-831 2-236 (286)
368 cd03259 ABC_Carb_Solutes_like 100.0 2.3E-36 5E-41 337.6 20.1 192 618-823 1-213 (213)
369 PRK15056 manganese/iron transp 100.0 4.2E-36 9.1E-41 347.6 22.9 208 1245-1469 6-230 (272)
370 COG4555 NatA ABC-type Na+ tran 100.0 1.4E-36 3E-41 314.8 16.6 213 1246-1471 2-224 (245)
371 PRK14250 phosphate ABC transpo 100.0 6.6E-36 1.4E-40 340.0 23.8 201 617-831 3-222 (241)
372 cd03297 ABC_ModC_molybdenum_tr 100.0 2.6E-36 5.6E-41 337.4 20.0 200 1246-1462 2-214 (214)
373 TIGR02770 nickel_nikD nickel i 100.0 2.8E-36 6E-41 340.8 20.3 206 1262-1477 1-223 (230)
374 cd03265 ABC_DrrA DrrA is the A 100.0 2.9E-36 6.3E-41 338.4 20.1 197 618-828 1-219 (220)
375 cd03223 ABCD_peroxisomal_ALDP 100.0 3.7E-36 8.1E-41 322.0 19.7 164 1246-1457 1-164 (166)
376 TIGR00960 3a0501s02 Type II (G 100.0 2.9E-36 6.2E-41 337.5 19.5 190 618-819 2-216 (216)
377 PRK13537 nodulation ABC transp 100.0 4.9E-36 1.1E-40 351.6 22.3 201 616-831 6-228 (306)
378 PRK13647 cbiO cobalt transport 100.0 4.6E-36 9.9E-41 347.3 21.8 199 617-828 4-225 (274)
379 cd03232 ABC_PDR_domain2 The pl 100.0 2.3E-36 5E-41 331.6 18.3 181 1245-1462 3-192 (192)
380 TIGR02315 ABC_phnC phosphonate 100.0 6.2E-36 1.3E-40 341.0 22.2 197 618-828 2-233 (243)
381 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.9E-36 8.5E-41 337.4 20.3 197 618-825 1-218 (220)
382 PRK14242 phosphate transporter 100.0 5.7E-36 1.2E-40 343.3 22.1 205 616-831 5-238 (253)
383 cd03256 ABC_PhnC_transporter A 100.0 5.4E-36 1.2E-40 341.1 21.6 198 618-828 1-232 (241)
384 cd03268 ABC_BcrA_bacitracin_re 100.0 5.9E-36 1.3E-40 333.0 21.4 192 618-823 1-208 (208)
385 cd03248 ABCC_TAP TAP, the Tran 100.0 9.2E-36 2E-40 335.8 23.2 204 615-819 9-226 (226)
386 TIGR00972 3a0107s01c2 phosphat 100.0 6E-36 1.3E-40 341.8 21.9 203 618-831 2-233 (247)
387 cd03226 ABC_cobalt_CbiO_domain 100.0 4E-36 8.6E-41 333.6 19.9 187 620-820 2-205 (205)
388 PRK11153 metN DL-methionine tr 100.0 6E-36 1.3E-40 356.0 22.5 203 618-831 2-231 (343)
389 PRK14269 phosphate ABC transpo 100.0 6.8E-36 1.5E-40 341.1 22.0 204 617-831 2-231 (246)
390 CHL00131 ycf16 sulfate ABC tra 100.0 7.7E-36 1.7E-40 342.1 22.3 212 1245-1467 7-239 (252)
391 PRK13641 cbiO cobalt transport 100.0 9.1E-36 2E-40 347.1 22.9 203 617-830 2-234 (287)
392 cd03214 ABC_Iron-Siderophores_ 100.0 4.5E-36 9.8E-41 326.0 18.9 177 1247-1462 1-180 (180)
393 PRK11607 potG putrescine trans 100.0 8.7E-36 1.9E-40 356.8 23.1 203 616-832 18-241 (377)
394 TIGR03608 L_ocin_972_ABC putat 100.0 3.2E-36 7E-41 334.6 18.0 193 1248-1453 1-206 (206)
395 cd03224 ABC_TM1139_LivF_branch 100.0 9.1E-36 2E-40 335.0 21.7 199 618-829 1-220 (222)
396 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.8E-35 4E-40 328.7 23.8 189 616-824 5-206 (207)
397 cd03263 ABC_subfamily_A The AB 100.0 7.9E-36 1.7E-40 335.0 21.0 198 618-828 1-219 (220)
398 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5.9E-36 1.3E-40 335.5 19.8 190 618-819 1-218 (218)
399 PRK13635 cbiO cobalt transport 100.0 1.6E-35 3.5E-40 343.4 24.0 202 617-831 5-230 (279)
400 PRK14273 phosphate ABC transpo 100.0 1.3E-35 2.9E-40 340.4 23.1 204 617-831 7-239 (254)
401 PRK13644 cbiO cobalt transport 100.0 1.4E-35 3E-40 343.2 23.3 200 618-830 2-224 (274)
402 cd03235 ABC_Metallic_Cations A 100.0 7.1E-36 1.5E-40 333.6 20.0 189 620-823 2-213 (213)
403 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.4E-35 3E-40 336.5 22.7 203 618-831 2-222 (236)
404 PRK03695 vitamin B12-transport 100.0 9.8E-36 2.1E-40 339.8 21.3 206 1246-1469 1-222 (248)
405 PRK11247 ssuB aliphatic sulfon 100.0 1.7E-35 3.6E-40 338.5 23.2 196 616-826 11-219 (257)
406 cd03218 ABC_YhbG The ABC trans 100.0 1E-35 2.2E-40 336.9 21.2 202 618-830 1-222 (232)
407 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-35 2.5E-40 356.9 22.6 200 617-831 3-229 (402)
408 PRK11629 lolD lipoprotein tran 100.0 1.4E-35 2.9E-40 335.9 22.0 196 617-824 5-228 (233)
409 cd03258 ABC_MetN_methionine_tr 100.0 1.2E-35 2.7E-40 336.3 21.6 202 618-830 2-230 (233)
410 cd03301 ABC_MalK_N The N-termi 100.0 9.1E-36 2E-40 332.8 20.1 192 618-823 1-213 (213)
411 PRK13636 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 344.4 22.9 201 617-831 5-232 (283)
412 TIGR01288 nodI ATP-binding ABC 100.0 1.6E-35 3.5E-40 347.7 22.6 202 616-831 3-225 (303)
413 PRK13536 nodulation factor exp 100.0 1.7E-35 3.8E-40 350.3 22.4 203 615-831 39-262 (340)
414 PRK14235 phosphate transporter 100.0 2.3E-35 4.9E-40 340.5 22.6 205 615-830 17-251 (267)
415 COG1245 Predicted ATPase, RNas 100.0 9.3E-35 2E-39 331.3 27.1 176 1269-1469 363-547 (591)
416 PRK10744 pstB phosphate transp 100.0 2.6E-35 5.7E-40 338.9 22.9 205 616-831 12-245 (260)
417 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.1E-35 2.4E-40 343.4 19.7 197 620-831 27-251 (269)
418 COG1123 ATPase components of v 100.0 1.8E-35 3.9E-40 355.2 22.2 228 1245-1481 5-256 (539)
419 PRK09493 glnQ glutamine ABC tr 100.0 2.4E-35 5.3E-40 335.4 22.2 199 618-831 2-226 (240)
420 cd03266 ABC_NatA_sodium_export 100.0 1.6E-35 3.6E-40 331.9 20.4 195 618-823 2-218 (218)
421 PRK13649 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 343.5 22.0 203 618-830 3-234 (280)
422 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.7E-35 3.6E-40 337.1 20.7 202 618-830 1-225 (242)
423 PRK09580 sufC cysteine desulfu 100.0 1.3E-35 2.7E-40 339.6 19.7 211 1246-1467 2-233 (248)
424 PRK14274 phosphate ABC transpo 100.0 3E-35 6.4E-40 338.4 22.8 205 616-831 11-244 (259)
425 PRK13645 cbiO cobalt transport 100.0 2.4E-35 5.1E-40 344.3 22.3 204 616-830 5-240 (289)
426 cd03269 ABC_putative_ATPase Th 100.0 1.8E-35 4E-40 329.6 20.2 192 618-823 1-210 (210)
427 PRK10619 histidine/lysine/argi 100.0 2.7E-35 5.8E-40 338.4 22.0 201 616-830 4-241 (257)
428 cd03264 ABC_drug_resistance_li 100.0 1.7E-35 3.6E-40 330.1 19.5 190 618-823 1-211 (211)
429 PRK11831 putative ABC transpor 100.0 2.6E-35 5.6E-40 340.4 21.7 201 616-831 6-234 (269)
430 TIGR03415 ABC_choXWV_ATP choli 100.0 2.3E-35 5.1E-40 351.5 21.8 189 632-831 36-255 (382)
431 TIGR01184 ntrCD nitrate transp 100.0 1.5E-35 3.2E-40 334.7 19.1 190 1263-1468 1-203 (230)
432 TIGR00630 uvra excinuclease AB 100.0 1.7E-34 3.7E-39 373.6 31.3 216 1245-1467 612-923 (924)
433 cd03267 ABC_NatA_like Similar 100.0 1.8E-35 3.9E-40 335.2 19.5 191 1260-1462 34-236 (236)
434 COG1131 CcmA ABC-type multidru 100.0 3.4E-35 7.4E-40 341.2 22.2 201 617-830 4-226 (293)
435 TIGR02211 LolD_lipo_ex lipopro 100.0 3.2E-35 7E-40 330.3 21.1 191 618-820 2-220 (221)
436 PRK14245 phosphate ABC transpo 100.0 3.1E-35 6.7E-40 336.6 21.2 204 617-831 3-235 (250)
437 PRK11231 fecE iron-dicitrate t 100.0 4.3E-35 9.3E-40 336.3 22.5 199 618-830 3-227 (255)
438 cd03231 ABC_CcmA_heme_exporter 100.0 3.8E-35 8.2E-40 324.5 21.2 194 1246-1453 1-198 (201)
439 PRK13632 cbiO cobalt transport 100.0 4.9E-35 1.1E-39 338.5 23.0 203 616-830 6-231 (271)
440 PRK14237 phosphate transporter 100.0 5.2E-35 1.1E-39 337.6 23.1 205 616-831 19-252 (267)
441 cd03216 ABC_Carb_Monos_I This 100.0 4.1E-35 8.9E-40 313.0 20.6 159 1246-1460 1-162 (163)
442 TIGR03411 urea_trans_UrtD urea 100.0 3.8E-35 8.1E-40 334.3 21.7 208 617-830 2-231 (242)
443 PRK15079 oligopeptide ABC tran 100.0 4.1E-35 8.8E-40 346.3 22.7 206 616-832 7-253 (331)
444 cd03247 ABCC_cytochrome_bd The 100.0 4.3E-35 9.3E-40 317.8 21.1 166 618-823 1-178 (178)
445 PRK13640 cbiO cobalt transport 100.0 4.5E-35 9.8E-40 340.4 22.7 202 616-830 4-232 (282)
446 PRK14248 phosphate ABC transpo 100.0 4.5E-35 9.9E-40 338.5 22.6 205 616-831 20-253 (268)
447 PRK14259 phosphate ABC transpo 100.0 5.3E-35 1.1E-39 337.7 23.0 205 616-831 12-254 (269)
448 PRK14239 phosphate transporter 100.0 3.8E-35 8.3E-40 336.4 21.7 204 617-831 5-237 (252)
449 PRK11300 livG leucine/isoleuci 100.0 5.2E-35 1.1E-39 335.9 22.6 206 617-830 5-243 (255)
450 PRK14268 phosphate ABC transpo 100.0 4.5E-35 9.7E-40 336.7 21.9 205 616-831 11-243 (258)
451 TIGR03410 urea_trans_UrtE urea 100.0 4E-35 8.6E-40 331.6 21.1 198 618-828 1-219 (230)
452 COG0411 LivG ABC-type branched 100.0 7.6E-36 1.7E-40 321.7 14.4 213 1246-1471 5-241 (250)
453 PRK11264 putative amino-acid A 100.0 3.7E-35 8E-40 336.1 21.1 200 617-831 3-234 (250)
454 PRK10070 glycine betaine trans 100.0 3.2E-35 6.9E-40 352.8 21.4 187 634-831 42-255 (400)
455 PRK13642 cbiO cobalt transport 100.0 6.5E-35 1.4E-39 338.4 23.3 203 617-831 4-230 (277)
456 PRK13548 hmuV hemin importer A 100.0 8.2E-35 1.8E-39 334.2 23.9 199 617-830 2-230 (258)
457 PRK00635 excinuclease ABC subu 100.0 4.7E-34 1E-38 382.5 34.8 207 1245-1469 600-906 (1809)
458 PRK10247 putative ABC transpor 100.0 4.3E-35 9.3E-40 329.9 21.1 197 616-826 6-223 (225)
459 TIGR02769 nickel_nikE nickel i 100.0 6.2E-35 1.3E-39 336.7 22.9 208 617-835 2-245 (265)
460 PRK15439 autoinducer 2 ABC tra 100.0 6.2E-35 1.3E-39 366.7 24.6 212 1245-1469 11-229 (510)
461 PRK10895 lipopolysaccharide AB 100.0 6.5E-35 1.4E-39 332.1 22.5 203 617-830 3-226 (241)
462 PRK11614 livF leucine/isoleuci 100.0 8.8E-35 1.9E-39 330.2 23.5 205 617-830 5-226 (237)
463 PRK14249 phosphate ABC transpo 100.0 6.7E-35 1.5E-39 334.0 22.7 204 617-831 4-236 (251)
464 PRK14251 phosphate ABC transpo 100.0 4.5E-35 9.6E-40 335.5 21.2 204 617-831 4-236 (251)
465 PRK13648 cbiO cobalt transport 100.0 9E-35 1.9E-39 336.1 23.9 202 617-831 7-232 (269)
466 PRK11124 artP arginine transpo 100.0 7.3E-35 1.6E-39 331.9 22.8 199 617-830 2-230 (242)
467 PRK14240 phosphate transporter 100.0 7.1E-35 1.5E-39 333.7 22.6 203 617-830 3-234 (250)
468 PRK13638 cbiO cobalt transport 100.0 5.7E-35 1.2E-39 338.1 22.0 199 618-831 2-226 (271)
469 PRK13633 cobalt transporter AT 100.0 9.5E-35 2.1E-39 337.5 23.9 203 617-831 4-234 (280)
470 PRK14270 phosphate ABC transpo 100.0 7E-35 1.5E-39 333.8 22.5 204 617-831 4-236 (251)
471 PRK13549 xylose transporter AT 100.0 4.3E-35 9.3E-40 368.2 22.7 212 1245-1469 5-232 (506)
472 PRK10575 iron-hydroxamate tran 100.0 6.5E-35 1.4E-39 336.5 22.3 200 616-830 10-237 (265)
473 cd03292 ABC_FtsE_transporter F 100.0 4.1E-35 9E-40 327.7 19.9 189 618-819 1-214 (214)
474 cd03298 ABC_ThiQ_thiamine_tran 100.0 6.4E-35 1.4E-39 325.5 21.2 189 618-823 1-211 (211)
475 COG4175 ProV ABC-type proline/ 100.0 2.4E-35 5.3E-40 324.0 17.4 187 635-832 43-256 (386)
476 TIGR01188 drrA daunorubicin re 100.0 3.6E-35 7.8E-40 344.5 19.9 188 632-830 5-213 (302)
477 PRK10253 iron-enterobactin tra 100.0 7.9E-35 1.7E-39 335.8 22.3 202 615-830 5-233 (265)
478 TIGR02673 FtsE cell division A 100.0 3.7E-35 8E-40 328.1 19.0 188 618-818 2-214 (214)
479 PRK09700 D-allose transporter 100.0 4.5E-35 9.7E-40 368.7 22.0 212 1245-1469 5-234 (510)
480 PRK10584 putative ABC transpor 100.0 9.7E-35 2.1E-39 328.0 22.3 195 617-822 6-227 (228)
481 TIGR03005 ectoine_ehuA ectoine 100.0 8E-35 1.7E-39 333.6 21.9 200 618-831 1-237 (252)
482 cd03225 ABC_cobalt_CbiO_domain 100.0 4.2E-35 9E-40 327.0 19.0 187 620-818 2-211 (211)
483 PRK14247 phosphate ABC transpo 100.0 8.7E-35 1.9E-39 332.9 22.1 204 617-831 3-235 (250)
484 TIGR03522 GldA_ABC_ATP gliding 100.0 6.7E-35 1.4E-39 341.9 21.6 199 618-831 3-222 (301)
485 PRK10762 D-ribose transporter 100.0 5.9E-35 1.3E-39 366.6 22.7 212 1245-1469 4-230 (501)
486 PRK13639 cbiO cobalt transport 100.0 7.2E-35 1.6E-39 337.6 21.7 200 618-831 2-227 (275)
487 PRK14243 phosphate transporter 100.0 1E-34 2.2E-39 334.5 22.7 204 617-831 10-249 (264)
488 PRK13652 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 336.5 23.0 201 617-831 3-228 (277)
489 cd03257 ABC_NikE_OppD_transpor 100.0 4.8E-35 1E-39 330.5 19.5 200 618-823 2-228 (228)
490 COG4619 ABC-type uncharacteriz 100.0 2.6E-35 5.7E-40 296.0 15.1 198 1253-1460 9-214 (223)
491 PRK13538 cytochrome c biogenes 100.0 6.9E-35 1.5E-39 323.3 20.2 194 1246-1453 2-202 (204)
492 TIGR03873 F420-0_ABC_ATP propo 100.0 9.1E-35 2E-39 333.8 21.7 198 618-830 2-226 (256)
493 PRK14238 phosphate transporter 100.0 1.1E-34 2.5E-39 335.3 22.6 205 616-831 23-256 (271)
494 PRK10261 glutathione transport 100.0 5.2E-35 1.1E-39 374.5 21.7 223 1245-1475 12-264 (623)
495 COG0410 LivF ABC-type branched 100.0 7.9E-35 1.7E-39 311.5 19.4 206 617-831 3-227 (237)
496 PRK14236 phosphate transporter 100.0 1.2E-34 2.7E-39 335.3 22.3 205 616-831 24-257 (272)
497 PRK14267 phosphate ABC transpo 100.0 1E-34 2.2E-39 333.0 21.3 204 617-831 4-238 (253)
498 PRK14253 phosphate ABC transpo 100.0 1.2E-34 2.6E-39 331.5 21.8 203 617-830 3-233 (249)
499 PRK14244 phosphate ABC transpo 100.0 9.6E-35 2.1E-39 332.7 21.0 204 617-831 5-238 (251)
500 PRK11248 tauB taurine transpor 100.0 1.2E-34 2.7E-39 331.8 21.8 193 618-825 2-215 (255)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-274 Score=2614.14 Aligned_cols=1255 Identities=47% Similarity=0.777 Sum_probs=1166.9
Q ss_pred CCCcccCch--hHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCcHhHHHHHHHHHHhhccCCCCCCchhhHHHHHHHHh
Q 039402 222 LTPYSRAGV--LSVITYSWINSLIALGNKKTLDLEDVPQLDSGDSVSGAFANFKNKLETEGGVGSGLTTVKLIKAMFCSV 299 (1496)
Q Consensus 222 ~~p~~~a~~--~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~~~~~l~~al~~~~ 299 (1496)
++|.+.++. +|++||||++|++++|||++|+.+|+|+++++|+++.+.++|++.|+++.++ +.++|+++++++++|
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~--~~~~psl~~al~~~f 199 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGR--SGKKPSLLRALLRTF 199 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhcc--ccCCcHHHHHHHHHH
Confidence 344555555 9999999999999999999999999999999999999999999999998622 225689999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 300 WKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAALIA 379 (1496)
Q Consensus 300 ~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L~~ 379 (1496)
|+++++.+++..+.+.+.+++|.+++.+++|+++++...+.||+++++++++.++++++.++|+|..+++|+|+|++|.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~ 279 (1381)
T KOG0054|consen 200 GRTFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALIS 279 (1381)
T ss_pred HHHHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHH
Confidence 99999999999999999999999999999999987555678999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 039402 380 MIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYIHDPWLVLFEVALSILILYKNLGIASLAALFGTVIVMLVNI 459 (1496)
Q Consensus 380 ~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~~~~~~~~ 459 (1496)
+||+|+|++++.+++++++|+|+|+|++|++|+.++++++|.+|.+|+|+++++++||..+|+++++|++++++++|+|.
T Consensus 280 ~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~ 359 (1381)
T KOG0054|consen 280 AIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNS 359 (1381)
T ss_pred HHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 460 PLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFWGAPTFVS 539 (1496)
Q Consensus 460 ~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~ 539 (1496)
+++++++++|++.|+.+|+|++.|+|+|+|||+||+||||+.|.++|++.|++|+++++|..+..+++.++++++|++++
T Consensus 360 ~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~ 439 (1381)
T KOG0054|consen 360 FLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVS 439 (1381)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCccE
Q 039402 540 VATFGTCI-LLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSGSSETAL 618 (1496)
Q Consensus 540 ~~~f~~~~-~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~i 618 (1496)
+++|++|+ ..++.+++.++|+++++|++|+.|+..+|..++.+.|++||++|+++||..+|.+++.....+.+..+..+
T Consensus 440 ~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i 519 (1381)
T KOG0054|consen 440 VVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAI 519 (1381)
T ss_pred HHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceE
Confidence 99999999 77889999999999999999999999999999999999999999999999999888766543444556789
Q ss_pred EEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCeeEEEccCCccCCCcHH
Q 039402 619 DIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGKIE 698 (1496)
Q Consensus 619 ~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~~~yv~Q~~~i~~~ti~ 698 (1496)
+++|++|+|+.++..++|+||||+|++|+++||||++||||||||++|+||+++.+|+|.++|.+|||||+|||||||||
T Consensus 520 ~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvr 599 (1381)
T KOG0054|consen 520 EIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVR 599 (1381)
T ss_pred EEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHH
Confidence 99999999997666679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHH
Q 039402 699 DNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTG 778 (1496)
Q Consensus 699 eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~ 778 (1496)
|||+||.++|++||++|+++|+|++|++.||.||+|+|||||.||||||||||+||||+|+|+||||||||+||||+|++
T Consensus 600 eNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg 679 (1381)
T KOG0054|consen 600 ENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVG 679 (1381)
T ss_pred HhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchHHHHHHhHHHHhhhCCCCCCCCc
Q 039402 779 SHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFMELVGAHEQALLALGSIEGRPAS 858 (1496)
Q Consensus 779 ~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (1496)
+|||++|+++.+++||+|+|||+++++++||+|++|+||+|.++|+|+|+++.+..+.++.... ..+..+..+ .+..
T Consensus 680 ~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~--~~~~~~~~~-~~~~ 756 (1381)
T KOG0054|consen 680 KHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEE--ESEQEEEAS-EKDL 756 (1381)
T ss_pred HHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhcc--chhhccccc-cccc
Confidence 9999999999999999999999999999999999999999999999999999988888873221 111111000 0000
Q ss_pred cCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 039402 859 ERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQ 938 (1496)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~ 938 (1496)
+.. ....... .+ .. + ..+...++..+.+....++.++|+|+.|.|+|++|++|+++.+|++.+++++++.++.+
T Consensus 757 ~~~-~~~~~~~-~~-~~-~--~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~ 830 (1381)
T KOG0054|consen 757 ESG-ESSRESE-SR-SL-E--SLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQ 830 (1381)
T ss_pred ccc-ccccchh-hh-hh-h--hhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 000 0000000 00 00 0 00000000011112245677889999999999999999999888888888888899999
Q ss_pred HHHHHhhhHHHhhcCCCCCCCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Q 039402 939 ILQIASNYWIVWATPGTKDVKPV-VTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFD 1017 (1496)
Q Consensus 939 ~~~~~~~~wl~~~~~~~~~~~~~-~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd 1017 (1496)
+++++++|||++|++........ .+...|+++|.+++++++++.++|++.+...++++|+.+|++|+++++|+||+|||
T Consensus 831 ~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFd 910 (1381)
T KOG0054|consen 831 VLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFD 910 (1381)
T ss_pred HHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcC
Confidence 99999999999998754322221 46778999999999999999999999999999999999999999999999999999
Q ss_pred ccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1018 ATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVG 1097 (1496)
Q Consensus 1018 ~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~ 1097 (1496)
+||+|||+||||+|++.+|..+|..+..++..+++++++++++++++|+++++++|+.++|+++++||++++||++|+++
T Consensus 911 tTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLes 990 (1381)
T KOG0054|consen 911 TTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLES 990 (1381)
T ss_pred CCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 039402 1098 VCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGF 1177 (1496)
Q Consensus 1098 ~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~ 1177 (1496)
++|||+++||+||++|+.|||||+++++|.+++..++|.+++++|+..+++||+++|+|+++++++++++++.+..+.+.
T Consensus 991 itRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~ 1070 (1381)
T KOG0054|consen 991 ITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGL 1070 (1381)
T ss_pred cccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888777666
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCC
Q 039402 1178 IDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAP 1257 (1496)
Q Consensus 1178 ~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~ 1257 (1496)
.+||.+|++++|++++++.++|++++.+++|++|+|||||.||+++|+|+|+..+..+||++||++|+|+|+|+++||+|
T Consensus 1071 ~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp 1150 (1381)
T KOG0054|consen 1071 ISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRP 1150 (1381)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCC
Confidence 88999999999999999999999999999999999999999999999998888777779999999999999999999999
Q ss_pred CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccch
Q 039402 1258 QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTV 1337 (1496)
Q Consensus 1258 ~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTI 1337 (1496)
+.|+|||||||+|+||||||||||||||||||+++|||+.||.+|+|.|||+||+++++||||++++||||||+||+||+
T Consensus 1151 ~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTv 1230 (1381)
T KOG0054|consen 1151 NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTV 1230 (1381)
T ss_pred CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHH
Q 039402 1338 RSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTAT 1417 (1496)
Q Consensus 1338 R~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~T 1417 (1496)
|+||||+++|+|+|||+|||+|+|+++|+++|+|||++|.|+|+|||.||||++||||||||++||||||||||++|++|
T Consensus 1231 R~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~T 1310 (1381)
T KOG0054|consen 1231 RFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPET 1310 (1381)
T ss_pred ccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhhccC
Q 039402 1418 DNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTLRSS 1487 (1496)
Q Consensus 1418 d~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~~~~ 1487 (1496)
|+.||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++.++..++.
T Consensus 1311 D~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~~~~~ 1380 (1381)
T KOG0054|consen 1311 DALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAALSSR 1380 (1381)
T ss_pred HHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999887653
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-213 Score=2167.94 Aligned_cols=1439 Identities=32% Similarity=0.537 Sum_probs=1190.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 039402 7 FLLKPIFLRWFSCSLHLVLLVGLLVSWVWNKIKTGEGDHNRGSREMFKNKKALWYKLTLACCFGVSLFNIVFSLLSYFYW 86 (1496)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1496)
|.||+++.+..++..+|++++.....+..++..+.+ . .. ...........+.++||....+++...++.. ...
T Consensus 29 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 101 (1622)
T PLN03130 29 YTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQ---R-FC--LRSKWYNYFLALLAAYCTAEPLFRLVMGISV-LNL 101 (1622)
T ss_pred CCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccC---C-cc--ccchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcc
Confidence 789999988888877766555544444332211010 0 11 1111222344455555555555554443332 222
Q ss_pred ccC-CccchhhhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhHHHHHHHH---HHHHHHHhhhhh-hhhccchhhh
Q 039402 87 YEN-GWSDYQLVTLLDFGVKTLGWSAICVCLHTVFLNSRQPKLPILLKLWWAFY---VFISCYCLIVDI-VLCEKQVSLQ 161 (1496)
Q Consensus 87 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~ 161 (1496)
.+. ++.......+...++..+++++.......++.++. .+++.+++||++. .++.++ ... ...... ...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~ 175 (1622)
T PLN03130 102 DGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYIREF--RWYVRFAVIYVLVGDAVMLNLV---LSVKEYYSSF-VLY 175 (1622)
T ss_pred ccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcC--CCcceeehhHHHhhHHHHHHHH---HHHHHHHhcc-ccc
Confidence 221 12222333244455555555555553334443333 5789999999887 555544 212 221110 001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccccccCccCCCCCCCCCCCCCCCCCCCCCCCcccCchhHHHHHHhHHH
Q 039402 162 IQYLISDVASAMTGLFLCFVGILSKIEGEDALLLREPLLKADSNETDGTVPSIKSEGADKLTPYSRAGVLSVITYSWINS 241 (1496)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~p 241 (1496)
.......+++..+++++ +.+...++.. ...|... +.. .+.+-++.+...+.+||++||+|||++|+|++|
T Consensus 176 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~-~~~---~~~~~~~~~~~~~~~pe~~a~~~s~~~F~W~~p 245 (1622)
T PLN03130 176 -LYISEVAAQVLFGILLL-VYFPNLDPYP----GYTPIGS-ESV---DDYEYEELPGGEQICPERHANIFSRIFFGWMTP 245 (1622)
T ss_pred -eehhHHHHHHHHHHHHH-HHHhcCCCCc----ccccccc-ccc---ccccccCCcccCCCCcccccCHHHHHHHHHHHH
Confidence 11222233333333331 1111111100 1111100 000 000112223346779999999999999999999
Q ss_pred HHHccccCCCCCCCCCCCCCCCcHhHHHHHHHHHHhhccCCCCCCchhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 039402 242 LIALGNKKTLDLEDVPQLDSGDSVSGAFANFKNKLETEGGVGSGLTTVKLIKAMFCSVWKDVLVTGFLTVLYTLASYVGP 321 (1496)
Q Consensus 242 l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P 321 (1496)
++++||+++|+.+|||+|+++|+++.++++|++.|+++. ++++++++++++++||+.++..+++.++..++.+++|
T Consensus 246 l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P 321 (1622)
T PLN03130 246 LMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL----KKPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQFVGP 321 (1622)
T ss_pred HHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh----ccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999764 2245789999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHH
Q 039402 322 YLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEI 401 (1496)
Q Consensus 322 ~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i 401 (1496)
++++.+++++.+++ ....++.+++++++..++.+++.+++++...++++++|+.++..+|+|.++++...+++.++|++
T Consensus 322 ~ll~~li~~v~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~i 400 (1622)
T PLN03130 322 LLLNLLLESMQNGE-PAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKI 400 (1622)
T ss_pred HHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHH
Confidence 99999999997543 23457777777777767777788888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 402 INFMTVDAERVADFSWYIHDPWLVLFEVALSILILYKNLGIASLAALFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMK 481 (1496)
Q Consensus 402 ~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~ 481 (1496)
+|+|++|++++.+++..+|.+|..|++++++++++|..+|+++++++++++++++++..++++.++.+++.++.+|+|.+
T Consensus 401 vnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~ 480 (1622)
T PLN03130 401 TNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIG 480 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Q 039402 482 ATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFWGAPTFVSVATFGTCILLNVPLESGKMLSA 561 (1496)
Q Consensus 482 ~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~ 561 (1496)
.++|+++|||+||+|+||+.|.+++++.|++|++..++..+..++..++....|.++++++|++|.+.++++|++.+|++
T Consensus 481 ~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~vf~~ 560 (1622)
T PLN03130 481 LMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARAFTS 560 (1622)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999998888888777788888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeE
Q 039402 562 IATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINL 641 (1496)
Q Consensus 562 l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l 641 (1496)
+++++.+..|+..+|..+..+.++++|++||++|++.+|..+.... +.......|+++|++|+|+..+++++|+|+||
T Consensus 561 l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~--~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl 638 (1622)
T PLN03130 561 LSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNP--PLEPGLPAISIKNGYFSWDSKAERPTLSNINL 638 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCC--cccCCCCceEEEeeEEEccCCCCCceeeceeE
Confidence 9999999999999999999999999999999999987664321111 11112246999999999975445789999999
Q ss_pred EEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCc-cEEEEcCeeEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhc
Q 039402 642 KVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS-GTLKLCGTKAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACS 720 (1496)
Q Consensus 642 ~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~-G~i~~~g~~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~ 720 (1496)
+|++||+++|+||+|||||||+++|+|+++|++ |+|.+.|+++||+|+||+|++||||||+||.++|+++|++++++|+
T Consensus 639 ~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~ 718 (1622)
T PLN03130 639 DVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTA 718 (1622)
T ss_pred EecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhC
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred hhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEcc
Q 039402 721 LKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTH 800 (1496)
Q Consensus 721 l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH 800 (1496)
|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.+.+++||+|+|||
T Consensus 719 L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH 798 (1622)
T PLN03130 719 LQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTN 798 (1622)
T ss_pred cHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred CcCccccCCEEEEEeCCeEEEecChHHHHhcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhcc
Q 039402 801 QVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVEN 880 (1496)
Q Consensus 801 ~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1496)
+++.++.||+|++|++|+|+++|+++|+++.++.|.++...+....+.. +.............+. ........
T Consensus 799 ~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~-- 871 (1622)
T PLN03130 799 QLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYV---EENGEEEDDQTSSKPV--ANGNANNL-- 871 (1622)
T ss_pred CHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhcccccccc---cccccccccccccccc--cccccccc--
Confidence 9999999999999999999999999999988877877765432110000 0000000000000000 00000000
Q ss_pred ccCCCCchhhhhhhccchhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCC
Q 039402 881 NKGQNDKADEVAVSKGQLVQEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKP 960 (1496)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~ 960 (1496)
.+.. ............+.++|+++.|.+++++|++|+++.++.+++.+++++.++.+++.+++++|+++|++.... .
T Consensus 872 ~~~~-~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~--~ 948 (1622)
T PLN03130 872 KKDS-SSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTP--K 948 (1622)
T ss_pred cccc-cccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--C
Confidence 0000 000000011123556788999999999999999987766666666666778888999999999998853221 1
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhh
Q 039402 961 VVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIP 1040 (1496)
Q Consensus 961 ~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~ 1040 (1496)
......|+++|++++++..++.+++.++....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++
T Consensus 949 ~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~ 1028 (1622)
T PLN03130 949 THGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVA 1028 (1622)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 12245678889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHh
Q 039402 1041 SLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSF 1120 (1496)
Q Consensus 1041 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf 1120 (1496)
..+..++..++.+++.++++++++|..+++++|+.+++++++++|.+++|+++|++..+++|+++|+.|+++|+.|||+|
T Consensus 1029 ~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf 1108 (1622)
T PLN03130 1029 VFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAY 1108 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhC
Confidence 99999999999999999999998988888888888888888999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHHHHH
Q 039402 1121 DQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFI-----DPAIAGLAVTYGLTLNT 1195 (1496)
Q Consensus 1121 ~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~-----~~g~~gl~l~y~l~l~~ 1195 (1496)
+++++|.+.+.+..|.+.+..+.....++|+++++++++++++.+.+.+.+.. .+.. .++.+|++++|++.+..
T Consensus 1109 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~-~~~~~~~~~~~~~~G~~ls~~~~~~~ 1187 (1622)
T PLN03130 1109 KAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQ-NGRAENQAAFASTMGLLLSYALNITS 1187 (1622)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887766555443332 2211 26889999999999999
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcE
Q 039402 1196 LLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEK 1275 (1496)
Q Consensus 1196 ~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~Gek 1275 (1496)
.+.++++.+.++|+.++|+||+.+|.+.|+|++...++..+++.||.+|.|+|+||+|+|+++.++||+|+||+|+||||
T Consensus 1188 ~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~Gek 1267 (1622)
T PLN03130 1188 LLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEK 1267 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCE
Confidence 99999999999999999999999999999887654444556778999999999999999998878899999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCCCCcHHHHHHH
Q 039402 1276 TGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEA 1355 (1496)
Q Consensus 1276 vgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~a 1355 (1496)
||||||||||||||+++|+|+++|++|+|+|||+||+++++++||++|++|||||+||+||||+||||+++++|+|||+|
T Consensus 1268 VaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~A 1347 (1622)
T PLN03130 1268 VGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWES 1347 (1622)
T ss_pred EEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 039402 1356 LDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVL 1435 (1496)
Q Consensus 1356 L~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI 1435 (1496)
|++|+++|+|.++|+||||+|+|+|.|||||||||+||||||||+|+|||||||||+||.+||+.||++|++.|++||||
T Consensus 1348 l~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI 1427 (1622)
T PLN03130 1348 LERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTML 1427 (1622)
T ss_pred HHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhhcc
Q 039402 1436 TIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTLRS 1486 (1496)
Q Consensus 1436 ~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~~~ 1486 (1496)
+||||++|+++||||+|||+|+|+|+|+|++|+++++|.|++|+++++..+
T Consensus 1428 ~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~~~ 1478 (1622)
T PLN03130 1428 IIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGAAN 1478 (1622)
T ss_pred EEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcChhh
Confidence 999999999999999999999999999999999887899999999887543
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.9e-209 Score=2128.19 Aligned_cols=1435 Identities=31% Similarity=0.517 Sum_probs=1184.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHh-hccCCCCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039402 7 FLLKPIFLRWFSCSLHLVLLVGLLVSWVWN-KIKTGEGDHNRGSREMFKNKKALWYKLTLACCFGVSLFNIVFSLLSYFY 85 (1496)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (1496)
|.||+++.+..++..+|++++.....+... +.+ .+ . .. ...........+.++|+....+++...+... ..
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 100 (1495)
T PLN03232 29 YTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAK-AQ-I---YV--LRKKYYNCVLGILACYCVVEPVLRLVMGISL-FD 100 (1495)
T ss_pred CCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccc-cC-C---cc--ccchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hc
Confidence 789999988877777765555444443331 111 11 0 11 1111122344445555555555443333332 22
Q ss_pred hccC-CccchhhhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhHHHHHHHH---HHHHHHHhhhhh-hhhccchhh
Q 039402 86 WYEN-GWSDYQLVTLLDFGVKTLGWSAICVCLHTVFLNSRQPKLPILLKLWWAFY---VFISCYCLIVDI-VLCEKQVSL 160 (1496)
Q Consensus 86 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~ 160 (1496)
+.+. .+.......+...++..++++++......++.++. .+++.+++||++. .++.+. ... ...... ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~ 174 (1495)
T PLN03232 101 MDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYVKEF--RWYVRFGVVYVLVADAVLLDLV---LPLKNSINRT-AL 174 (1495)
T ss_pred cccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcC--CCCceeeehhHhhhhHHHHHHH---HHHHHHHhcc-cc
Confidence 2221 12122223244556666666666553334443333 5789999999887 555544 212 221110 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccCccCCCCCCCCCCCCCCCCCCCCCCCcccCchhHHHHHHhHH
Q 039402 161 QIQYLISDVASAMTGLFLCFVGILSKIEGEDALLLREPLLKADSNETDGTVPSIKSEGADKLTPYSRAGVLSVITYSWIN 240 (1496)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~ 240 (1496)
. ......++.+..+++. +..+...++.+ ...+... +. ..|.+.+..|...+.+||+++|+|||+||+|++
T Consensus 175 ~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~-~~---~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~w~~ 244 (1495)
T PLN03232 175 Y-LCISSRCCQALFGILL-LVYIPELDPYP----GYHILNN-ES---LDNVEYDALRGGENICPERYASIFSRIYFSWMT 244 (1495)
T ss_pred c-eehhHHHHHHHHHHHH-HHhcccCCCCC----ccccccc-cc---ccccccccccccCCCCccccCCHHHHHHHHHHH
Confidence 1 1112222222222222 11111111000 0000000 00 000111223445678999999999999999999
Q ss_pred HHHHccccCCCCCCCCCCCCCCCcHhHHHHHHHHHHhhccCCCCCCchhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 039402 241 SLIALGNKKTLDLEDVPQLDSGDSVSGAFANFKNKLETEGGVGSGLTTVKLIKAMFCSVWKDVLVTGFLTVLYTLASYVG 320 (1496)
Q Consensus 241 pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~ 320 (1496)
|++++||+++|+.+|||+|+++|+++.++++|++.|+++. +.++++++++++++||+.++..++++++.+++.+++
T Consensus 245 pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 320 (1495)
T PLN03232 245 PLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES----RRPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFVG 320 (1495)
T ss_pred HHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh----ccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999764 224579999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHH
Q 039402 321 PYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAALIAMIYNKGLTLSSQAKQGQSSGE 400 (1496)
Q Consensus 321 P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~ 400 (1496)
|++++.+++++++++. ...++.+++++++..++.+++.+++++...+++.++|..++..+|+|.++++...+++.++|+
T Consensus 321 P~ll~~li~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~ 399 (1495)
T PLN03232 321 PVILSHLLQSMQEGDP-AWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGK 399 (1495)
T ss_pred HHHHHHHHHHHhcCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHH
Confidence 9999999999975432 345777888888888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 401 IINFMTVDAERVADFSWYIHDPWLVLFEVALSILILYKNLGIASLAALFGTVIVMLVNIPLGRVQENFQDKLMKSKDERM 480 (1496)
Q Consensus 401 i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~ 480 (1496)
++|+|++|++++.+++..+|.+|..|++++++++++|..+|++++++++++++++|++..++++.++.+++.++.+|+|.
T Consensus 400 i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~ 479 (1495)
T PLN03232 400 VTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRV 479 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888889999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHH
Q 039402 481 KATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFWGAPTFVSVATFGTCILLNVPLESGKMLS 560 (1496)
Q Consensus 481 ~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft 560 (1496)
+.++|+++|||+||+|+||+.+.+++++.|++|.+..++..+..++..++....|.++.+++|++|.+.++++|++.+|+
T Consensus 480 ~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~ 559 (1495)
T PLN03232 480 GIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFT 559 (1495)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999998888877777777788888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCccEEEEeeEEEecCCCCCCceeeee
Q 039402 561 AIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSGSSETALDIVDGNFSWDISSHNPTLKDIN 640 (1496)
Q Consensus 561 ~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~ 640 (1496)
++++++.+..|+..+|..+..+.++++|++||++|++.+|...+... +.......++++|++|+|+..+++++|+|+|
T Consensus 560 ~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~--~~~~~~~~I~~~~vsF~y~~~~~~~vL~~in 637 (1495)
T PLN03232 560 SLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNP--PLQPGAPAISIKNGYFSWDSKTSKPTLSDIN 637 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccC--CcCCCCCcEEEEeeEEEcCCCCCCceeeeeE
Confidence 99999999999999999999999999999999999987653221111 1111224699999999997544578999999
Q ss_pred EEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCcc-EEEEcCeeEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHh
Q 039402 641 LKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISG-TLKLCGTKAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDAC 719 (1496)
Q Consensus 641 l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G-~i~~~g~~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~ 719 (1496)
|+|++||+++|+||+|||||||+++|+|+++|++| .+.+.+++|||+|+||+|++||||||+||.++++++|++++++|
T Consensus 638 l~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~ 717 (1495)
T PLN03232 638 LEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVT 717 (1495)
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999997 45778999999999999999999999999999999999999999
Q ss_pred chhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEc
Q 039402 720 SLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVT 799 (1496)
Q Consensus 720 ~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvt 799 (1496)
+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.+.+++||+|+||
T Consensus 718 ~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvT 797 (1495)
T PLN03232 718 ALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVT 797 (1495)
T ss_pred CCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred cCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhc
Q 039402 800 HQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVE 879 (1496)
Q Consensus 800 H~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (1496)
|+++.++.||+|++|++|+|+++|+++|+++.++.|.++...+...... . +..+..+.. ....+. .. ...
T Consensus 798 H~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~--~-~~~~~~~~~-~~~~~~--~~--~~~-- 867 (1495)
T PLN03232 798 NQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDAT--Q-EVNTNDENI-LKLGPT--VT--IDV-- 867 (1495)
T ss_pred CChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccc--c-ccccccccc-cccccc--cc--ccc--
Confidence 9999999999999999999999999999998887787776543211000 0 000000000 000000 00 000
Q ss_pred cccCCCCchhhhhhhccchhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCC
Q 039402 880 NNKGQNDKADEVAVSKGQLVQEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVK 959 (1496)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~ 959 (1496)
..+.. ....+.+.....+.++|+++.|.+++++|++|+++.++.+++.+++++.++.+++.+++++|+++|++....
T Consensus 868 ~~~~~-~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-- 944 (1495)
T PLN03232 868 SERNL-GSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTP-- 944 (1495)
T ss_pred ccccc-ccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC--
Confidence 00000 000000011123567788999999999999999997766666666666777888899999999999853211
Q ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhh
Q 039402 960 PVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGI 1039 (1496)
Q Consensus 960 ~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l 1039 (1496)
.......|+++|++++++..++.+++.++....+.++++++|++++++++++|++|||++|+|+|+||+++|++.+|..+
T Consensus 945 ~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l 1024 (1495)
T PLN03232 945 KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNV 1024 (1495)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHH
Confidence 12234678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHH
Q 039402 1040 PSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRS 1119 (1496)
Q Consensus 1040 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRa 1119 (1496)
+..+..++..++.+++.+++++.+++..+++++|+.+++++++.+|.+++|+++|.+..+++|+++|++|+++|+.|||+
T Consensus 1025 ~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIra 1104 (1495)
T PLN03232 1025 ANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRA 1104 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhc
Confidence 99999999999999998888888888777778888888888899999999999999999999999999999999999999
Q ss_pred hccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHHHH
Q 039402 1120 FDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFI-----DPAIAGLAVTYGLTLN 1194 (1496)
Q Consensus 1120 f~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~-----~~g~~gl~l~y~l~l~ 1194 (1496)
|+++++|.+++.+..|.+.+..+.....++|+.+++++++++++.+.+.+.+.. .+.+ .++.+|++++|+..+.
T Consensus 1105 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~~~~~ 1183 (1495)
T PLN03232 1105 YKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYTLNIT 1183 (1495)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988876555544443322 2322 2567889999999999
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCc
Q 039402 1195 TLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGE 1274 (1496)
Q Consensus 1195 ~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~Ge 1274 (1496)
..+.++++.+.++|+.++|+||+.+|.+.|+|++...+...+++.||.+|.|+|+||+|+|+++.++||+|+||+|+|||
T Consensus 1184 ~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~Ge 1263 (1495)
T PLN03232 1184 TLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSE 1263 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCC
Confidence 99999999999999999999999999999888654333344667899999999999999998887889999999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCCCCcHHHHHH
Q 039402 1275 KTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWE 1354 (1496)
Q Consensus 1275 kvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~ 1354 (1496)
|||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|||+
T Consensus 1264 kvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~ 1343 (1495)
T PLN03232 1264 KVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWE 1343 (1495)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEE
Q 039402 1355 ALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTV 1434 (1496)
Q Consensus 1355 aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TV 1434 (1496)
||++|+++|+|+++|+||||+|+|+|.|||||||||+||||||||+|+|||||||||+||++||+.||++|++.+++|||
T Consensus 1344 al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~Tv 1423 (1495)
T PLN03232 1344 ALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTM 1423 (1495)
T ss_pred HHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhhcc
Q 039402 1435 LTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTLRS 1486 (1496)
Q Consensus 1435 I~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~~~ 1486 (1496)
|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|+++.+..+
T Consensus 1424 I~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~~ 1475 (1495)
T PLN03232 1424 LVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPAN 1475 (1495)
T ss_pred EEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChhh
Confidence 9999999999999999999999999999999999987789999999887643
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.2e-206 Score=2105.05 Aligned_cols=1356 Identities=33% Similarity=0.568 Sum_probs=1148.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCcchhHHHHHHHHHHHHHHHhhhhhhhhccch-hhhHHHHHHHHHHHHHHHH
Q 039402 99 LLDFGVKTLGWSAICVCLHTVFLNSRQPKLPILLKLWWAFYVFISCYCLIVDIVLCEKQV-SLQIQYLISDVASAMTGLF 177 (1496)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 177 (1496)
...+++..++|+++.+....++.++.+ .+..+.+||++..++.+..+++.......+. ...........+.+.+.++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~e~~~~~~--~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1522)
T TIGR00957 101 LVSPTLLGITMLLATFLIQLERRKGVQ--SSGIMLTFWLVALVCALAILRSKILLALKEDAIVDPFRDTTFYIYFALVLS 178 (1522)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcccC--CCcchhHHHHHHHHHHHHHHHHHHHHhhcccccccceehhhHHHHHHHHHH
Confidence 344566777777666555455544443 4678999998887776666554431100000 0000000111111111111
Q ss_pred HHHHHHhccccccccccccccCccCCCCCCCCCCCCCCCCCCCCCCCcccCchhHHHHHHhHHHHHHccccCCCCCCCCC
Q 039402 178 LCFVGILSKIEGEDALLLREPLLKADSNETDGTVPSIKSEGADKLTPYSRAGVLSVITYSWINSLIALGNKKTLDLEDVP 257 (1496)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~ 257 (1496)
++ .+... . -..|++.++. .....+||++||++||++|+|+||++++||+++|+.+|||
T Consensus 179 ~~--~~~~~--~-----~~~~~~~~~~-------------~~~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~ 236 (1522)
T TIGR00957 179 QL--VLSCF--S-----DKSPLFSETN-------------HDPNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLW 236 (1522)
T ss_pred HH--HHHhh--c-----CCCCcccccc-------------ccCCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhcc
Confidence 11 11100 0 0123332101 1134579999999999999999999999999999999999
Q ss_pred CCCCCCcHhHHHHHHHHHHhhccCCC-------------------------------------CCCchhhHHHHHHHHhH
Q 039402 258 QLDSGDSVSGAFANFKNKLETEGGVG-------------------------------------SGLTTVKLIKAMFCSVW 300 (1496)
Q Consensus 258 ~l~~~~~~~~~~~~f~~~w~~~~~~~-------------------------------------~~~~~~~l~~al~~~~~ 300 (1496)
+++++++++.++++|++.|+++..+. ++.++++|+++++++||
T Consensus 237 ~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~ 316 (1522)
T TIGR00957 237 SLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFG 316 (1522)
T ss_pred CCCHhHhHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccCCccHHHHHHHHHh
Confidence 99999999999999999998652000 11234789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 301 KDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAALIAM 380 (1496)
Q Consensus 301 ~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L~~~ 380 (1496)
+.++..++++++.+++.+++|++++.+++++.++......||.+++++++..++.+++.++|.+...++++++|++|+..
T Consensus 317 ~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~ 396 (1522)
T TIGR00957 317 PYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGA 396 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997654334468888889999999999999999999999999999999999
Q ss_pred HHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 039402 381 IYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYIHDPWLVLFEVALSILILYKNLGIASLAALFGTVIVMLVNIP 460 (1496)
Q Consensus 381 iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~~~~~~~~~ 460 (1496)
||+|+|+++...+++.++|+++|+|++|++++.++..++|.+|..|++++++++++|..+|+++++++++++++++++..
T Consensus 397 iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~ 476 (1522)
T TIGR00957 397 VYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAV 476 (1522)
T ss_pred HHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 461 LGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFWGAPTFVSV 540 (1496)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~ 540 (1496)
+++..+++++++|+.+|+|++.++|+++|||.||+|+||+.|.+++++.|++|++..++..+...+..+.....|.++.+
T Consensus 477 ~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (1522)
T TIGR00957 477 MAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVAL 556 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888888877777788999999
Q ss_pred HHHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCC-CCCCcc
Q 039402 541 ATFGTCILL--NVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPS-GSSETA 617 (1496)
Q Consensus 541 ~~f~~~~~~--~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~-~~~~~~ 617 (1496)
++|++|.+. ++.++++.+|+++++++.++.|+..+|..+..+.++++|++||++|++.++.++...+.... ......
T Consensus 557 ~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~ 636 (1522)
T TIGR00957 557 ITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNS 636 (1522)
T ss_pred HHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCCCCc
Confidence 999988876 46799999999999999999999999999999999999999999999876654321111111 111236
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCeeEEEccCCccCCCcH
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGKI 697 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~~~yv~Q~~~i~~~ti 697 (1496)
++++|++|+|+. +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++||+|+||++++||
T Consensus 637 i~~~~~~~~~~~-~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~Ti 715 (1522)
T TIGR00957 637 ITVHNATFTWAR-DLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQNDSL 715 (1522)
T ss_pred EEEEEeEEEcCC-CCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEEEEEcCCccccCCcH
Confidence 999999999963 2457999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHH
Q 039402 698 EDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHT 777 (1496)
Q Consensus 698 ~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~ 777 (1496)
+|||.||.++++++|++++++|++.+|++.+|+||+|.+|++|.+|||||||||+||||+|++||||||||||||||+++
T Consensus 716 ~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~ 795 (1522)
T TIGR00957 716 RENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHV 795 (1522)
T ss_pred HHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH--HHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchHHHHHHhHHHHhhhCCCCC-
Q 039402 778 GSHLFQEVLL--GLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFMELVGAHEQALLALGSIEG- 854 (1496)
Q Consensus 778 ~~~i~~~~~~--~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 854 (1496)
++++++.++. +.++++|+|+|||+++.++.||+|++|++|++++.|+++++.+.++.|.++...+..........+.
T Consensus 796 ~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 875 (1522)
T TIGR00957 796 GKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSW 875 (1522)
T ss_pred HHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhccccccccccccc
Confidence 9999998873 4667899999999999999999999999999999999999998777777766433211100000000
Q ss_pred CCC--ccCCCCC--CC--------Cccccccc--hhhhccccCC---CC---chhhhhhhccchhHHHHHhhccchHHHH
Q 039402 855 RPA--SERASGE--NG--------GTVIANRI--VKEVENNKGQ---ND---KADEVAVSKGQLVQEEEREKGKVGFSVY 914 (1496)
Q Consensus 855 ~~~--~~~~~~~--~~--------~~~~~~~~--~~~~~~~~~~---~~---~~~~~~~~~~~~~~~e~~~~g~v~~~~y 914 (1496)
.+. .+..... .. ........ .......... .. +..+......+..++|+++.|+|++++|
T Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 955 (1522)
T TIGR00957 876 TALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVY 955 (1522)
T ss_pred cccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHHhcCcccHHHH
Confidence 000 0000000 00 00000000 0000000000 00 0000001123456778888999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 915 WKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGY 994 (1496)
Q Consensus 915 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~ 994 (1496)
+.|+++.+. ..+++++++.++.+++.+++++|+++|++......+..+...|+++|++++++..++.+++.++....+.
T Consensus 956 ~~Y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~ 1034 (1522)
T TIGR00957 956 WDYMKAIGL-FITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGI 1034 (1522)
T ss_pred HHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998753 4444555556777888899999999998632111122234567789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 039402 995 KTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPA 1074 (1496)
Q Consensus 995 ~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~ 1074 (1496)
++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.++++++.+|+++++++|+
T Consensus 1035 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~ 1114 (1522)
T TIGR00957 1035 QASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPL 1114 (1522)
T ss_pred HHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 039402 1075 VGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLR 1154 (1496)
Q Consensus 1075 ~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~r 1154 (1496)
++++++++++|.+++|+++|++..+++|+++|+.|+++|+.|||+|+++++|.+++.+..|.++++.+.....++|++.+
T Consensus 1115 ~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1194 (1522)
T TIGR00957 1115 GLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVR 1194 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCC
Q 039402 1155 LDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEES 1234 (1496)
Q Consensus 1155 l~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~ 1234 (1496)
+++++.+++.++..+.+ ...+.+++|.+|++++|++.+...+.++++.++++|+.++|+||+.+|.+.|+|++...+..
T Consensus 1195 ~~~~~~~~~~~~~~~~v-~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~ 1273 (1522)
T TIGR00957 1195 LECVGNCIVLFAALFAV-ISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQET 1273 (1522)
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCC
Confidence 99998765554444433 33577899999999999999999999999999999999999999999999888865433444
Q ss_pred CCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCC
Q 039402 1235 RPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI 1314 (1496)
Q Consensus 1235 ~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i 1314 (1496)
.+++.||.+|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++|++|+|+|||+||+++
T Consensus 1274 ~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i 1353 (1522)
T TIGR00957 1274 APPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKI 1353 (1522)
T ss_pred CCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEcccc
Confidence 56778999999999999999998777899999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHhcccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1315 GLHDLRSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1315 ~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
++++||++|++|||||+||+||||+||||+++++|+|||+||++|+++++|.++|+||||+|+|+|.|||||||||+|||
T Consensus 1354 ~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LA 1433 (1522)
T TIGR00957 1354 GLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLA 1433 (1522)
T ss_pred CHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcH
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSS 1474 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~ 1474 (1496)
|||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++|+++||||+|||+|+|+|+|+|++|+++ +|.
T Consensus 1434 RALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~ 1512 (1522)
T TIGR00957 1434 RALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGI 1512 (1522)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 699
Q ss_pred HHHHHHHH
Q 039402 1475 FSQLVAEY 1482 (1496)
Q Consensus 1475 F~~l~~~~ 1482 (1496)
|++|+++.
T Consensus 1513 f~~l~~~~ 1520 (1522)
T TIGR00957 1513 FYSMAKDA 1520 (1522)
T ss_pred HHHHHHHc
Confidence 99999884
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.1e-198 Score=2019.53 Aligned_cols=1251 Identities=28% Similarity=0.466 Sum_probs=1093.0
Q ss_pred CCCcccCchhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCcHhHHHHHHHHHHhhccCCCCCCchhhHHHHHHHHhHH
Q 039402 222 LTPYSRAGVLSVITYSWINSLIALGNKKTLDLEDVPQLDSGDSVSGAFANFKNKLETEGGVGSGLTTVKLIKAMFCSVWK 301 (1496)
Q Consensus 222 ~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~~~~~l~~al~~~~~~ 301 (1496)
.+||++||+|||++|+|+||++++||+++|+.+|||+|+++++++.++++|++.|+++.. ++.++++|+++++++|++
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~--~~~~~~~L~~~l~~~~~~ 80 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELA--SAKKNPKLLNALRRCFFW 80 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHh--ccCCCChHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999987541 123457899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 302 DVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDF-ENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAALIAM 380 (1496)
Q Consensus 302 ~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~-~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L~~~ 380 (1496)
.++..+++.++.+++.+++|++++.+++|++..+.. ...+|.++++++++.++.+++.++++|...++++++|++|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~ 160 (1490)
T TIGR01271 81 RFVFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSL 160 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999543222 2358888999999999999999999999999999999999999
Q ss_pred HHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 039402 381 IYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYIHDPWLVLFEVALSILILYKNLGIASLAALFGTVIVMLVNIP 460 (1496)
Q Consensus 381 iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~~~~~~~~~ 460 (1496)
||+|+|+++....++.++|+++|+|++|++++.+++.++|.+|..|+++++++++||.++|+++++++++++++++++.+
T Consensus 161 iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~ 240 (1490)
T TIGR01271 161 IYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQAC 240 (1490)
T ss_pred HHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 461 LGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFWGAPTFVSV 540 (1496)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~ 540 (1496)
+++...++++++|+++|+|++.++|+++|||+||+|+||+.|.+++++.|++|++..++..+...+..++++..|.++++
T Consensus 241 ~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1490)
T TIGR01271 241 LGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888889999999
Q ss_pred HHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCccEE
Q 039402 541 ATFGTCILLNVPLESGKMLSAIATFRLLQVPIY-NLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSGSSETALD 619 (1496)
Q Consensus 541 ~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~-~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~i~ 619 (1496)
++|++|.+.++ ++++.+|+++++|++++.|+. .+|..+..+.++.+|++||++||..+|.++.... .....++
T Consensus 321 ~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~-----~~~~~i~ 394 (1490)
T TIGR01271 321 LSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEYN-----LTTTEVE 394 (1490)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccc-----CCCCceE
Confidence 99999988754 789999999999999999985 7999999999999999999999988765432111 1123589
Q ss_pred EEeeEEEecCC-------------------------------CCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhc
Q 039402 620 IVDGNFSWDIS-------------------------------SHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILG 668 (1496)
Q Consensus 620 ~~~~~~~~~~~-------------------------------~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG 668 (1496)
++|++|+|+.. ..+++|+|+||+|++|++++|+|||||||||||++|+|
T Consensus 395 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G 474 (1490)
T TIGR01271 395 MVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMG 474 (1490)
T ss_pred EecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999999531 01468999999999999999999999999999999999
Q ss_pred CCCCCccEEEEcCeeEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 669 EVPKISGTLKLCGTKAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 669 ~~~~~~G~i~~~g~~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
+++|++|+|.++|+++||+|+||++++||+|||+||.++++++|++++++|+|.+|++.+|.||+|.+|++|.+||||||
T Consensus 475 ~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqk 554 (1490)
T TIGR01271 475 ELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQR 554 (1490)
T ss_pred CCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l 828 (1496)
|||+||||+|++|+||||||||||||+++++++++.|+.+.++++|+|+|||+++.++.||+|++|++|++++.|+++++
T Consensus 555 qRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l 634 (1490)
T TIGR01271 555 ARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSEL 634 (1490)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999999999999888877789999999999999989999999999999999999999
Q ss_pred HhcCcchHHHHHHhHHHHh---h--------------hC--------CCCC-----CCCcc--CC---C-----------
Q 039402 829 INSGTDFMELVGAHEQALL---A--------------LG--------SIEG-----RPASE--RA---S----------- 862 (1496)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~---~--------------~~--------~~~~-----~~~~~--~~---~----------- 862 (1496)
.+.+..+.+.........+ . .+ +.+. .+... .. .
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1490)
T TIGR01271 635 QAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARK 714 (1490)
T ss_pred HhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8776666555431100000 0 00 0000 00000 00 0
Q ss_pred ---------C----CCCCcc--cc------------------ccch-------------------hhh---ccccCC---
Q 039402 863 ---------G----ENGGTV--IA------------------NRIV-------------------KEV---ENNKGQ--- 884 (1496)
Q Consensus 863 ---------~----~~~~~~--~~------------------~~~~-------------------~~~---~~~~~~--- 884 (1496)
. ..+... .. .... ... ....+.
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1490)
T TIGR01271 715 FSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQT 794 (1490)
T ss_pred cccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccc
Confidence 0 000000 00 0000 000 000000
Q ss_pred -C-----------------------Cch------h--hhhhhccchhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHH
Q 039402 885 -N-----------------------DKA------D--EVAVSKGQLVQEEEREKGKVGFSVYWKYITTAFGGALVPFILL 932 (1496)
Q Consensus 885 -~-----------------------~~~------~--~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~ 932 (1496)
. .++ . +.+.....+.++|+++.|.++|++|++|+++.+++.++.++++
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~ 874 (1490)
T TIGR01271 795 SFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCL 874 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHH
Confidence 0 000 0 0000112346678889999999999999998766555555566
Q ss_pred HHHHHHHHHHHhhhHHHhhcCCC------CCC---C-----Cc--c-cchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 933 AQTLFQILQIASNYWIVWATPGT------KDV---K-----PV--V-TGSTL-LIVYVALAVGSSFCVLARSTLLATAGY 994 (1496)
Q Consensus 933 ~~~~~~~~~~~~~~wl~~~~~~~------~~~---~-----~~--~-~~~~~-l~vy~~l~~~~~~~~~~~~~~~~~~~~ 994 (1496)
+.++++++..+.++|+.+|.... ... . |. . ...+| +++|++++++..++.+++.+++...+.
T Consensus 875 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1490)
T TIGR01271 875 VIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLL 954 (1490)
T ss_pred HHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66778899999999998775311 000 0 00 0 11223 556666666677788889999999999
Q ss_pred HHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 039402 995 KTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPA 1074 (1496)
Q Consensus 995 ~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~ 1074 (1496)
++++.+|.+++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.++++++.+|+++++++|+
T Consensus 955 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l 1034 (1490)
T TIGR01271 955 TVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPV 1034 (1490)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 039402 1075 VGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLR 1154 (1496)
Q Consensus 1075 ~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~r 1154 (1496)
++++++++++|.+++|+++|++..+++|+++||.|+++|+.|||+|+++++|.+++.+..|.+++.++.....++|+..+
T Consensus 1035 ~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 1114 (1490)
T TIGR01271 1035 AVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMR 1114 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCcc--
Q 039402 1155 LDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIE-- 1232 (1496)
Q Consensus 1155 l~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~-- 1232 (1496)
+++++.+.+...+++.+. ...+++|.+|++++|++.+...+.++++.++++|+.+.|+||+.+|.+.|+|++...+
T Consensus 1115 ~~~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~ 1192 (1490)
T TIGR01271 1115 IDIIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGG 1192 (1490)
T ss_pred HHHHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc
Confidence 999877654443333222 2245778899999999999999999999999999999999999999998887542211
Q ss_pred ------------CCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCC
Q 039402 1233 ------------ESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPA 1300 (1496)
Q Consensus 1233 ------------~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~ 1300 (1496)
...+|+.||..|.|+|+||+++|+++.++||+||||+|+||||||||||||||||||+++|+|+++ +
T Consensus 1193 ~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~ 1271 (1490)
T TIGR01271 1193 GKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-T 1271 (1490)
T ss_pred cccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C
Confidence 123456799999999999999999888899999999999999999999999999999999999998 7
Q ss_pred ccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 039402 1301 AGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1380 (1496)
Q Consensus 1301 ~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1380 (1496)
+|+|+|||+||++++++++|++|++|||||+||+||||+||||+++++|++||+||++|+++++|.++|+||||+|+|+|
T Consensus 1272 ~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G 1351 (1490)
T TIGR01271 1272 EGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGG 1351 (1490)
T ss_pred CcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeE
Q 039402 1381 ENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1381 ~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE 1460 (1496)
.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++|+.+||||+|||+|+|+|
T Consensus 1352 ~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE 1431 (1490)
T TIGR01271 1352 YVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQ 1431 (1490)
T ss_pred CcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhhHhhcCCcHHHHHHHHHhh
Q 039402 1461 FDNPANLLENKSSSFSQLVAEYTL 1484 (1496)
Q Consensus 1461 ~g~p~~Ll~~~~s~F~~l~~~~~~ 1484 (1496)
+|+|++|++ ++|.|++|++++..
T Consensus 1432 ~g~p~~Ll~-~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1432 YDSIQKLLN-ETSLFKQAMSAADR 1454 (1490)
T ss_pred eCCHHHHHc-CCcHHHHHHHHhCh
Confidence 999999996 58999999998774
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.6e-189 Score=1928.40 Aligned_cols=1259 Identities=30% Similarity=0.479 Sum_probs=1085.4
Q ss_pred CCCCCcccCchhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCcHhHHHHHHHHH----------HhhccC--------
Q 039402 220 DKLTPYSRAGVLSVITYSWINSLIALGNKKTLDLEDVPQLDSGDSVSGAFANFKNK----------LETEGG-------- 281 (1496)
Q Consensus 220 ~~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~----------w~~~~~-------- 281 (1496)
..+.||+++|||.++++.|++|++.+..|..|+.+|+|+...+.++-++..++.+. |+...+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (1560)
T PTZ00243 57 YTPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLD 136 (1560)
T ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecc
Confidence 45678999999999999999999999999999999999999999886665555443 321000
Q ss_pred --------------C-----------------------------------------------------------------
Q 039402 282 --------------V----------------------------------------------------------------- 282 (1496)
Q Consensus 282 --------------~----------------------------------------------------------------- 282 (1496)
+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (1560)
T PTZ00243 137 ASSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSS 216 (1560)
T ss_pred ccccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecc
Confidence 0
Q ss_pred ---------CCCCchhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHH
Q 039402 283 ---------GSGLTTVKLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKL 353 (1496)
Q Consensus 283 ---------~~~~~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~ 353 (1496)
...++..+|+++++++||+.++..++++++.+++.+++|++++.+++++++++.....|++++++++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~ 296 (1560)
T PTZ00243 217 TGSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQL 296 (1560)
T ss_pred cccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHH
Confidence 00123357999999999999999999999999999999999999999997654323357788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhc--CCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 039402 354 VECLCQRFRVFRLQQLGIRMRAALIAMIYNKGLTLSSQAKQ--GQSSGEIINFMTVDAERVADFSWYIHDPWLVLFEVAL 431 (1496)
Q Consensus 354 ~~~l~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~ls~~~~~--~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~ 431 (1496)
+++++.+++++...+.+.++|++|+..+|+|+++++..+.. +.++|+++|+|++|++++.+++.++|.+|..|+++++
T Consensus 297 ~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~ 376 (1560)
T PTZ00243 297 IQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLL 376 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987665 5689999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHH
Q 039402 432 SILILYKNLGIASLAALFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRK 511 (1496)
Q Consensus 432 ~~~lL~~~lg~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~ 511 (1496)
++++||..+|+++++|+++++++++++.++++++.++++++|+++|+|++.++|++++||+||++|||+.|.++|++.|+
T Consensus 377 ~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~ 456 (1560)
T PTZ00243 377 SILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRA 456 (1560)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 512 RETGWLKKYVYTSAISSFVFWGAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQR 591 (1496)
Q Consensus 512 ~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~R 591 (1496)
+|++.+++..+...+..++.+.+|.++.+++|++|.+.|++||++.+|+++++|++++.|+..+|..++.+.++++|++|
T Consensus 457 ~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~R 536 (1560)
T PTZ00243 457 RELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKR 536 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988988899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCccc----c------------C-----------------CC-------------------------CCC
Q 039402 592 IASFFCLDDLQPDLV----E------------K-----------------QP-------------------------SGS 613 (1496)
Q Consensus 592 i~~fL~~~e~~~~~~----~------------~-----------------~~-------------------------~~~ 613 (1496)
|++||..+|...... + . .+ ...
T Consensus 537 I~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (1560)
T PTZ00243 537 ISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRH 616 (1560)
T ss_pred HHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccc
Confidence 999998766311000 0 0 00 000
Q ss_pred CCccEEEEeeEEEecC-------------------------------------CCCCCceeeeeEEEeCCcEEEEEecCC
Q 039402 614 SETALDIVDGNFSWDI-------------------------------------SSHNPTLKDINLKVFHGMRVAVCGTVG 656 (1496)
Q Consensus 614 ~~~~i~~~~~~~~~~~-------------------------------------~~~~~~L~~i~l~i~~G~~~~ivG~~G 656 (1496)
....+.++|++++|+. .+++++|+|+||+|++|++++|+||||
T Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nG 696 (1560)
T PTZ00243 617 PSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATG 696 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCC
Confidence 0123556666665421 013568999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCCccEEEEcCeeEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccc
Q 039402 657 SGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVI 736 (1496)
Q Consensus 657 sGKSTLl~~ilG~~~~~~G~i~~~g~~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~i 736 (1496)
||||||+++|+|+++|++|+|.++++++||+|+||++++||+|||.|+.++++++|++++++|++++|++.+|+|++|.+
T Consensus 697 sGKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i 776 (1560)
T PTZ00243 697 SGKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEI 776 (1560)
T ss_pred CcHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHh
Confidence 99999999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeC
Q 039402 737 GERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKD 816 (1496)
Q Consensus 737 g~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~ 816 (1496)
|++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+.++|+|+|+|||+++.++.||+|++|++
T Consensus 777 ~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 777 GEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999888777789999999999999999999999999
Q ss_pred CeEEEecChHHHHhcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccC-CCCchhhhhhhc
Q 039402 817 GKITQAGKYNDLINSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKG-QNDKADEVAVSK 895 (1496)
Q Consensus 817 G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 895 (1496)
|+++++|+++++++.+ .+.++........+. .+.....+.......+................ ...+........
T Consensus 857 G~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTS-LYATLAAELKENKDS---KEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAA 932 (1560)
T ss_pred CEEEEecCHHHHHhCh-HHHHHHHhhcccccc---ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999998653 354443321110000 00000000000000000000000000000000 000000001122
Q ss_pred cchhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHH
Q 039402 896 GQLVQEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALA 975 (1496)
Q Consensus 896 ~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~ 975 (1496)
.++.++|+++.|.++|++|++|++..++..++.+++++.++.+++..++++|+++|++.. ...+...|+.+|+++.
T Consensus 933 ~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~----~~~~~~~~l~~y~~~~ 1008 (1560)
T PTZ00243 933 GRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRS----FKLSAATYLYVYLGIV 1008 (1560)
T ss_pred chhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cCCCcccHHHHHHHHH
Confidence 356677888899999999999999877666555555566677888899999999887532 1223456788999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHH
Q 039402 976 VGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILG 1055 (1496)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~ 1055 (1496)
++..++.+++.+.....+.++++.+|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++
T Consensus 1009 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~ 1088 (1560)
T PTZ00243 1009 LLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICS 1088 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHH
Q 039402 1056 TIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMD 1135 (1496)
Q Consensus 1056 ~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d 1135 (1496)
.++++++..|.++++++|+.+++++++++|.+..|+++|++..+++|++++++|+++|+.|||+|+++++|.+++.+..|
T Consensus 1089 ~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d 1168 (1560)
T PTZ00243 1089 SILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLD 1168 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHH
Confidence 99999999998888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 039402 1136 EYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLI---SIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKII 1212 (1496)
Q Consensus 1136 ~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~---~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~ 1212 (1496)
.+.+..+.....++|+..++++++.+++++.+++.+ ....+.+++|.++++++|+..+...+.++++.+.++|+.|+
T Consensus 1169 ~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~ 1248 (1560)
T PTZ00243 1169 VVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMN 1248 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998776544433322 22345578999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-CCCCCCCCc-----------------------cCCCCC---CCCCCcceEEEEeEEeEeCCCCCcccee
Q 039402 1213 SVERIFQYTC-IPSEPPLAI-----------------------EESRPN---DSWPSHGKIDLLDLQVRYAPQMPLVLQG 1265 (1496)
Q Consensus 1213 sveRi~~~~~-~~~E~~~~~-----------------------~~~~~~---~~wp~~g~I~f~nvs~~Y~~~~~~vLk~ 1265 (1496)
|+||+.+|.+ .|+|+.... +...++ +.||..|.|+|+||+|+|+++.|+||+|
T Consensus 1249 s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~ 1328 (1560)
T PTZ00243 1249 SVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRG 1328 (1560)
T ss_pred HHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeec
Confidence 9999999996 444421100 011122 2356779999999999999888889999
Q ss_pred eeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCC
Q 039402 1266 ISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE 1345 (1496)
Q Consensus 1266 iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~ 1345 (1496)
|||+|+||||||||||||||||||+++|+|+++|++|+|+|||+||+++++++||++|++|||||+||+||||+||||++
T Consensus 1329 vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~ 1408 (1560)
T PTZ00243 1329 VSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL 1408 (1560)
T ss_pred ceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccC-CCEEEEEcCCCCCCHHHHHHHHHH
Q 039402 1346 ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKR-SKILMLDEATASVDTATDNLIQQT 1424 (1496)
Q Consensus 1346 ~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~-~~ILiLDEaTsslD~~Td~~Iq~~ 1424 (1496)
+++|+|||+||++|+++++|.++|+||||.|+|+|.||||||||||||||||||+ |+|||||||||+||++||+.||++
T Consensus 1409 ~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~ 1488 (1560)
T PTZ00243 1409 EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT 1488 (1560)
T ss_pred CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999996 899999999999999999999999
Q ss_pred HHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhhcc
Q 039402 1425 LRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTLRS 1486 (1496)
Q Consensus 1425 I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~~~ 1486 (1496)
|++.|++||||+||||++|+.+||+|+|||+|+|+|+|+|++|+++++|.|++|+++.+...
T Consensus 1489 L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~~ 1550 (1560)
T PTZ00243 1489 VMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRSE 1550 (1560)
T ss_pred HHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChhH
Confidence 99999999999999999999999999999999999999999999888899999998876543
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.3e-145 Score=1372.65 Aligned_cols=1162 Identities=21% Similarity=0.262 Sum_probs=858.2
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCC--Ccc----hhHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 039402 297 CSVWKDVLVTGFLTVLYTLASYVGPYL---IDTFVQYLNGRR--DFE----NEGYVLVSAFCVAKLVECLC-QRFRVFRL 366 (1496)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~~~~~~~P~l---l~~~i~~~~~~~--~~~----~~g~~l~~~l~~~~~~~~l~-~~~~~~~~ 366 (1496)
.+-+.++++..+-.+...+....+|++ ...+.+.+.... ... ..++.+. .+.+..++.+++ ...|.+..
T Consensus 21 ~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~-~lg~~~~~~~~~q~~c~~~~g 99 (1228)
T KOG0055|consen 21 FADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFV-YLGVGVFISGFIQVSCWMRTG 99 (1228)
T ss_pred ccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 334566666666666666666677754 355555554322 101 1122111 122222223332 34566666
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhHHHHH
Q 039402 367 QQLGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWY-IHDPWLVLFEVALSILILYKNLGIASL 445 (1496)
Q Consensus 367 ~~~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~~~lL~~~lg~~~l 445 (1496)
.|...|+|... .+..||.....++.+.+|++.+.|+.|++++++.+.. +..+....-.++.++++.+..-...++
T Consensus 100 eRq~~riR~~y----l~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~~W~Ltl 175 (1228)
T KOG0055|consen 100 ERQTARIRSKY----LKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYYGWKLTL 175 (1228)
T ss_pred HHHHHHHHHHH----HHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666555 5566667778888888899999999999999997532 222222222233333333333334556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 446 AALFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSA 525 (1496)
Q Consensus 446 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~ 525 (1496)
+++...+++......+++.+.+...+.+++..+--....|.+.+||++-.|+-|+...++..+.-+.-.+.-.+......
T Consensus 176 v~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~g~~~G 255 (1228)
T KOG0055|consen 176 VMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKKGLFKG 255 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777777778888888888888888888888999999999999999999998888775543333333322222222
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-C
Q 039402 526 ISSFV--FWGAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDL-Q 602 (1496)
Q Consensus 526 ~~~~~--~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~-~ 602 (1496)
+...+ ++........++||..++..+..++|.+++++...-+-...+......+..+..|+++..+|.+.++..+. +
T Consensus 256 ~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~ 335 (1228)
T KOG0055|consen 256 LGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDRKPSID 335 (1228)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcCCCCCC
Confidence 22222 22223344556777777777889999999887666666677888888999999999999999998865432 2
Q ss_pred CccccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe
Q 039402 603 PDLVEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT 682 (1496)
Q Consensus 603 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~ 682 (1496)
+..............++++|++|+|+..++.++|+|+||+|++|+.+|+||||||||||++++|.|+|+|++|+|.++|.
T Consensus 336 ~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~ 415 (1228)
T KOG0055|consen 336 PYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGE 415 (1228)
T ss_pred cccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCc
Confidence 22111112223456899999999999877789999999999999999999999999999999999999999999999984
Q ss_pred -------------eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 -------------KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 -------------~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
+|.|.|+|-+|++||+|||.||+| .++++..++.+....++.+..+|+|++|.+||+|.+||||||
T Consensus 416 di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQK 495 (1228)
T KOG0055|consen 416 DIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQK 495 (1228)
T ss_pred cchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHH
Confidence 599999999999999999999995 678888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l 828 (1496)
|||||||||.+||+||||||||||||++.++. .+++++...+|+|.|+|+||++.++.||+|++|++|+|++.|+|+||
T Consensus 496 QRIAIARalv~~P~ILLLDEaTSaLD~~se~~-Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~EL 574 (1228)
T KOG0055|consen 496 QRIAIARALVRNPKILLLDEATSALDAESERV-VQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDEL 574 (1228)
T ss_pred HHHHHHHHHHhCCCEEEecCcccccCHHHHHH-HHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999998654 47889999999999999999999999999999999999999999999
Q ss_pred HhcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhcc
Q 039402 829 INSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGK 908 (1496)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~ 908 (1496)
++.++.|.+++..++......+..++.+..+...... ..+.......+............+.+...... .+++ -.
T Consensus 575 i~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~-~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~---~~ 649 (1228)
T KOG0055|consen 575 IALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSL-KSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPV-SEED---EK 649 (1228)
T ss_pred HhccchHHHHHHHHhhhhhhhccccccchhhhhhhcc-ccccccccccCCcccccccccccccccccccc-cccc---cc
Confidence 9999999999988765432221000000000000000 00000000000000000000000000000000 1111 12
Q ss_pred chHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCC---cccchHHHHHHHHHHHHHHHHHHH
Q 039402 909 VGFSVYWKYITTAFG-GALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKP---VVTGSTLLIVYVALAVGSSFCVLA 984 (1496)
Q Consensus 909 v~~~~y~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~---~~~~~~~l~vy~~l~~~~~~~~~~ 984 (1496)
++ +++-++.+.+ |.+..+-.++.++..+..-...+.+++........++ ......|..+|+++++++.++.++
T Consensus 650 ~s---~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~ 726 (1228)
T KOG0055|consen 650 VS---FWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFL 726 (1228)
T ss_pred cc---HHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 3444443333 2222222222222222221112222211110000111 112334889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc--cCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 039402 985 RSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDA--TPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQ 1062 (1496)
Q Consensus 985 ~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~--tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~ 1062 (1496)
..+++.+.|.+..++++.++++++++.++.|||. +. |+|.+|+.+|...+...+...+..++.++..++..+++.++
T Consensus 727 q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~ 805 (1228)
T KOG0055|consen 727 QHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFI 805 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999995 45 99999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHh
Q 039402 1063 VAWQVFIVFV---PAVGSCIWYQQYYISS-ARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYS 1138 (1496)
Q Consensus 1063 ~~~~~~~~~i---p~~~l~~~~~~~y~~~-~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~ 1138 (1496)
++|.+.++.+ |++++..+++.+++.. .++.+. ..........|++..++||++|+.|++|.+.+.+.++.-.
T Consensus 806 ~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~----~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~ 881 (1228)
T KOG0055|consen 806 YGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKK----AYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPR 881 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH----HHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999987654 5555555555554443 333332 2333446788999999999999999999999999888776
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHH
Q 039402 1139 RPTFHIAAAMEWLGLRLDMLSSITFAFTLVF----LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISV 1214 (1496)
Q Consensus 1139 ~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~----~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sv 1214 (1496)
+..+.. ..|-++...+-.+++++.-++. ..+...|..++..+-.++.-...-...+.......-++-+...|+
T Consensus 882 ~~~~~~---~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa 958 (1228)
T KOG0055|consen 882 KSSFKR---GLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAA 958 (1228)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHH
Confidence 665543 2355555555444444332222 234457777776654444333333334455556667788889999
Q ss_pred HHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCC-CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHH
Q 039402 1215 ERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQM-PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTL 1293 (1496)
Q Consensus 1215 eRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L 1293 (1496)
.++.+.++-+++-+...+.. ....+.+|+|+|+||+|+|+... .+||+|+|++|++||.+|+||+|||||||++.+|
T Consensus 959 ~~iF~i~dr~~~i~~~~~~~--~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LL 1036 (1228)
T KOG0055|consen 959 GSIFEILDRKPTIDPDSTSG--GKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLL 1036 (1228)
T ss_pred HHHHHHhcCCCCCCCCCCCC--CccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHH
Confidence 99999988665322111111 11113689999999999996332 2699999999999999999999999999999999
Q ss_pred hcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCc
Q 039402 1294 FRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKL 1372 (1496)
Q Consensus 1294 ~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gL 1372 (1496)
-|+|+|++|.|.|||.||++++++.||++|++|.|||+||++||||||... .+.+.+||.+|++.++.++||.++|+||
T Consensus 1037 eRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~Gy 1116 (1228)
T KOG0055|consen 1037 ERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGY 1116 (1228)
T ss_pred HHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcc
Confidence 999999999999999999999999999999999999999999999999987 4579999999999999999999999999
Q ss_pred ccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEE
Q 039402 1373 DSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLL 1452 (1496)
Q Consensus 1373 dt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlV 1452 (1496)
||.|||+|.+||||||||+|||||++||||||+||||||+||.++|+.+|++|.+...++|.|+|||||+||++||.|.|
T Consensus 1117 DT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~V 1196 (1228)
T KOG0055|consen 1117 DTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAV 1196 (1228)
T ss_pred cCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCeEeEecChhhHhhcCCcHHHHHHHHHh
Q 039402 1453 LNHGLIEEFDNPANLLENKSSSFSQLVAEYT 1483 (1496)
Q Consensus 1453 L~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~ 1483 (1496)
+++|+|+|.|+|++|++ ++|.|++|++...
T Consensus 1197 i~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1197 LKNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred EECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 99999999999999997 6899999998653
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.5e-136 Score=1394.09 Aligned_cols=1185 Identities=17% Similarity=0.189 Sum_probs=868.6
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 290 KLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQL 369 (1496)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 369 (1496)
.+++...+.+++.++++.++.++..++..+.|++++.+++.+..... ...+++.+++..++..++...+.+...++
T Consensus 49 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 124 (1466)
T PTZ00265 49 LPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN----VNDIIFSLVLIGIFQFILSFISSFCMDVV 124 (1466)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555555677778888888899999999999999999987642211 11222333344455556666777778888
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 039402 370 GIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFS-WYIHDPWLVLFEVALSILILYKNLGIASLAAL 448 (1496)
Q Consensus 370 ~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l 448 (1496)
+.++...++..+|+|.++++...+++.+.|++.+.++.|++.+.+.+ ..+..+...++.++.++++++..-...+++.+
T Consensus 125 ~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l 204 (1466)
T PTZ00265 125 TTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCIT 204 (1466)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999865 34555555566666666555544443445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 449 FGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISS 528 (1496)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~ 528 (1496)
+++++++.+...+.+..++..++..+..++..+.+.|.++|||+||.|+.|+.+.+++.+..+...+...+.....++..
T Consensus 205 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~ 284 (1466)
T PTZ00265 205 CVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHI 284 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666667778888888888888889999999999999999999999999999987655544444444333333322
Q ss_pred HHHHHH--HHHHHHHHHHHHHHhcC--------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 039402 529 FVFWGA--PTFVSVATFGTCILLNV--------PLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCL 598 (1496)
Q Consensus 529 ~~~~~~--p~~v~~~~f~~~~~~~~--------~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~ 598 (1496)
.+.... -..+.++++|.+.+..+ .++++.+++++....+...++..+...+..+..+.+|.+||.+.++.
T Consensus 285 ~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~ 364 (1466)
T PTZ00265 285 GMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINR 364 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 222211 22344556777776653 57888888776554444455556666789999999999999999976
Q ss_pred CCCCCccccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEE
Q 039402 599 DDLQPDLVEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLK 678 (1496)
Q Consensus 599 ~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~ 678 (1496)
++..+......... ....++++|++|+|+...+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.
T Consensus 365 ~~~~~~~~~~~~~~-~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 443 (1466)
T PTZ00265 365 KPLVENNDDGKKLK-DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDII 443 (1466)
T ss_pred CCCCCCCCCCccCC-CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEE
Confidence 54322111111111 12369999999999744345799999999999999999999999999999999999999999999
Q ss_pred Ec-C-------------eeEEEccCCccCCCcHHHHhccCCC--------------------------------------
Q 039402 679 LC-G-------------TKAYVAQSPWIQSGKIEDNILFGKE-------------------------------------- 706 (1496)
Q Consensus 679 ~~-g-------------~~~yv~Q~~~i~~~ti~eNI~~g~~-------------------------------------- 706 (1496)
++ | .++||+|+|.+|++||+|||.+|..
T Consensus 444 i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (1466)
T PTZ00265 444 INDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLN 523 (1466)
T ss_pred EeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhh
Confidence 95 4 2599999999999999999999741
Q ss_pred --------------------CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEE
Q 039402 707 --------------------MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLF 766 (1496)
Q Consensus 707 --------------------~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illL 766 (1496)
.++++..++++.+++++++..+|+|++|.+|++|.+|||||||||+||||++++|+||||
T Consensus 524 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlL 603 (1466)
T PTZ00265 524 DMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILIL 603 (1466)
T ss_pred hcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 234567778888999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHh--CCcEEEEEccCcCccccCCEEEEEeCC---------------------------
Q 039402 767 DDPFSAVDAHTGSHLFQEVLLGLL--SSKTVIYVTHQVEFLPAADLILVMKDG--------------------------- 817 (1496)
Q Consensus 767 Dep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~d~i~~l~~G--------------------------- 817 (1496)
|||||+||++++..+.+ .+.... +|+|+|+|||+++.+..||+|++|++|
T Consensus 604 DEpTSaLD~~se~~i~~-~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1466)
T PTZ00265 604 DEATSSLDNKSEYLVQK-TINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNN 682 (1466)
T ss_pred eCcccccCHHHHHHHHH-HHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccccc
Confidence 99999999999888864 455543 489999999999999889999999986
Q ss_pred --------------------eEEEecChHHHHh-cCcchHHHHHHhHHHHhhhC-C-CCCCCCccCCCCCCCC-c----c
Q 039402 818 --------------------KITQAGKYNDLIN-SGTDFMELVGAHEQALLALG-S-IEGRPASERASGENGG-T----V 869 (1496)
Q Consensus 818 --------------------~i~~~G~~~~l~~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~----~ 869 (1496)
+|+++|+|+|+++ .++.|..++..+........ . .+.....+........ . .
T Consensus 683 ~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1466)
T PTZ00265 683 KDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPDE 762 (1466)
T ss_pred cccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence 5999999999997 57888888865432211100 0 0000000000000000 0 0
Q ss_pred ccccchhhhcccc-CCCC-c--hh-hhhhhccchhHHHHH----hhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 039402 870 IANRIVKEVENNK-GQND-K--AD-EVAVSKGQLVQEEER----EKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQIL 940 (1496)
Q Consensus 870 ~~~~~~~~~~~~~-~~~~-~--~~-~~~~~~~~~~~~e~~----~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~ 940 (1496)
.......+..... .... . +. .+.....+....+++ ......+..+++++.......+ +.+++.++..++
T Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 840 (1466)
T PTZ00265 763 MNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVT--IIALSILVAGGL 840 (1466)
T ss_pred ccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 0000000000000 0000 0 00 000000000000000 0011123333444433222211 111122222333
Q ss_pred HHHhhhHHHhhcCCC-CCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc-
Q 039402 941 QIASNYWIVWATPGT-KDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDA- 1018 (1496)
Q Consensus 941 ~~~~~~wl~~~~~~~-~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~- 1018 (1496)
....++.++.+.+.. ...........+.+++++++++..++.+++.++....+.+...+++.++++++++.|++|||.
T Consensus 841 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~ 920 (1466)
T PTZ00265 841 YPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQD 920 (1466)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC
Confidence 333333333222100 000001123356667777888888899999999999999999999999999999999999996
Q ss_pred -cCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Q 039402 1019 -TPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYIS--SARELSRL 1095 (1496)
Q Consensus 1019 -tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~--~~r~l~rl 1095 (1496)
+++|++++|+++|++.+...+...+..++..++.+++.++++++.+|.++++++|++++.........+ ..++.++.
T Consensus 921 ~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1466)
T PTZ00265 921 KHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKK 1000 (1466)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 889999999999999999999988999999999999999999999998887776655443322221111 11222111
Q ss_pred -------------HHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1096 -------------VGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSIT 1162 (1496)
Q Consensus 1096 -------------~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~ 1162 (1496)
+....+.....+.|++.|+.|||+|+.|+++.+++.+..+...+..........++....+.+..+.
T Consensus 1001 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1080 (1466)
T PTZ00265 1001 EINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFI 1080 (1466)
T ss_pred hccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223455678999999999999999999999999999988877766555444443333333333333
Q ss_pred HHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCC-CCCC
Q 039402 1163 FAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRP-NDSW 1240 (1496)
Q Consensus 1163 ~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~-~~~w 1240 (1496)
.+++.++ ...+..|.++.|.+..++.+.+.....+..+...+.++++...+.+|+.++++.+++.+...+...+ +...
T Consensus 1081 ~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~ 1160 (1466)
T PTZ00265 1081 NSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKN 1160 (1466)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCC
Confidence 2222222 2334578888887666555544444456667788889999999999999999876543211111111 0112
Q ss_pred CCcceEEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC--------------------
Q 039402 1241 PSHGKIDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-------------------- 1299 (1496)
Q Consensus 1241 p~~g~I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-------------------- 1299 (1496)
+..|.|+|+||+|+|+++ ..+||+|+||+|+|||++||||+||||||||+++|.|+|+|
T Consensus 1161 ~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~ 1240 (1466)
T PTZ00265 1161 DIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQ 1240 (1466)
T ss_pred CCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccc
Confidence 346899999999999743 23699999999999999999999999999999999999999
Q ss_pred ----------------------------------CccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-
Q 039402 1300 ----------------------------------AAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL- 1344 (1496)
Q Consensus 1300 ----------------------------------~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~- 1344 (1496)
++|+|+|||+||+++++++||++|+||||||+||+|||||||...
T Consensus 1241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~ 1320 (1466)
T PTZ00265 1241 DYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGK 1320 (1466)
T ss_pred ccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCC
Confidence 699999999999999999999999999999999999999999876
Q ss_pred CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHH
Q 039402 1345 EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQT 1424 (1496)
Q Consensus 1345 ~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~ 1424 (1496)
++++|+||++|++.++++|+|.++|+||||.|||+|.+|||||||||||||||||+|+|||||||||+||++||+.|+++
T Consensus 1321 ~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~ 1400 (1466)
T PTZ00265 1321 EDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKT 1400 (1466)
T ss_pred CCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhc--CCcEEEEEccCcchhcccCEEEEEeC----CeE-eEecChhhHhhcCCcHHHHHHHHH
Q 039402 1425 LRQHF--SDCTVLTIAHRITSVIDSDLVLLLNH----GLI-EEFDNPANLLENKSSSFSQLVAEY 1482 (1496)
Q Consensus 1425 I~~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~----G~I-vE~g~p~~Ll~~~~s~F~~l~~~~ 1482 (1496)
|++.. +++|+|+||||++|+.+||+|+||++ |++ +|.|+|+||+++++|.|++|++..
T Consensus 1401 L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1401 IVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 99874 68999999999999999999999999 995 599999999976689999998754
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-90 Score=834.98 Aligned_cols=518 Identities=25% Similarity=0.379 Sum_probs=458.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHH
Q 039402 965 STLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVG 1044 (1496)
Q Consensus 965 ~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~ 1044 (1496)
.....+..++.++++++.++|.+++.+.+.+...+++..++++++|+.++|||.+.+|++++|+++|...+.+.++..++
T Consensus 188 ~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls 267 (716)
T KOG0058|consen 188 KRACTILLGLFLIGALANAIRGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLS 267 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHH
Confidence 44567778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHH
Q 039402 1045 AYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQES 1124 (1496)
Q Consensus 1045 ~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~ 1124 (1496)
..+.+.++.++.+++|++.+|.+.++.+..+++...+.++|-+..|++.+...++-+...+...|.++++.|+|+|+.|+
T Consensus 268 ~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~ 347 (716)
T KOG0058|consen 268 DGLRNLVQGFGGLGFMFSLSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEE 347 (716)
T ss_pred HHHHHHHHHHHhHHHHhhhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhH
Confidence 99999999999999999999999887776666666666777777777777777888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1125 RFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWF 1203 (1496)
Q Consensus 1125 ~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~ 1203 (1496)
+..+++.+.++...+.......+..-+.-..++.+.+.+...+.+ ..+...|.+++|..--.+.|...+...+.++...
T Consensus 348 ~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ 427 (716)
T KOG0058|consen 348 QEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSF 427 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888777655544333333222223334443333332222 3345678899999999999999999999999999
Q ss_pred HHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCC-CccceeeeEEeeCCcEEEEEcCC
Q 039402 1204 ACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQM-PLVLQGISCTFPGGEKTGIVGRT 1282 (1496)
Q Consensus 1204 ~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vLk~iS~~I~~GekvgIVGrT 1282 (1496)
+.++-+.+.|.+|+.||++.+|.-+.. ....| . .-+|.|+|+||+|.|+... .+||||+||+|+|||.||+||||
T Consensus 428 ys~lmkgvGAs~rvFel~dr~P~i~~~--G~~~p-~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPS 503 (716)
T KOG0058|consen 428 YSELMKGVGASERVFELMDRKPRIPLT--GTLAP-D-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPS 503 (716)
T ss_pred HHHHHHhcchHHHHHHHhccCCCCCCC--Ccccc-c-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCC
Confidence 999999999999999999876654332 11111 2 4689999999999997542 36999999999999999999999
Q ss_pred CCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCC
Q 039402 1283 GSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQL 1361 (1496)
Q Consensus 1283 GSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L 1361 (1496)
||||||++++|.|+|+|++|+|++||+||++++.+.||++||+|.|||+||+|||||||... ...+||||.+|.++++.
T Consensus 504 GsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANa 583 (716)
T KOG0058|consen 504 GSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANA 583 (716)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhCh
Confidence 99999999999999999999999999999999999999999999999999999999999854 47899999999999999
Q ss_pred cHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCc
Q 039402 1362 GDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRI 1441 (1496)
Q Consensus 1362 ~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl 1441 (1496)
+|||.++|+|+||.|||+|..||||||||++|||||+|||+|||||||||+||.++|..+|++|.+..+++|||+|||||
T Consensus 584 h~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRL 663 (716)
T KOG0058|consen 584 HEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRL 663 (716)
T ss_pred HHHHHhCccccccccCCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhhcc
Q 039402 1442 TSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTLRS 1486 (1496)
Q Consensus 1442 ~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~~~ 1486 (1496)
+||+.+|+|+|+|+|+|+|.|+|+||+++++|.|++|+++.....
T Consensus 664 STV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~gly~~Lv~~q~~~~ 708 (716)
T KOG0058|consen 664 STVRHADQIVVIDKGRVVEMGTHDELLSKPNGLYAKLVQRQLDSG 708 (716)
T ss_pred hHhhhccEEEEEcCCeEEecccHHHHhhCcccHHHHHHHHhcccC
Confidence 999999999999999999999999999999999999999876543
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=7.5e-84 Score=812.93 Aligned_cols=565 Identities=26% Similarity=0.364 Sum_probs=498.2
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 911 FSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLA 990 (1496)
Q Consensus 911 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~ 990 (1496)
+..++.++... +....-+++..++.+++.+++++...+..|..-..........+..++++.++...++.++|.++..
T Consensus 142 ~~~f~~~~~~~--~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 142 LSWFIPLLFKY--RRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred hHhHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555432 2233445666778889999999998877754321111222334455666778888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 039402 991 TAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIV 1070 (1496)
Q Consensus 991 ~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1070 (1496)
+.+.+....+-.++++|+++.|++||.+.++|++++|++ |++.+-..+...+...+..++..+..+++|.+++|+++++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li 298 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLI 298 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999996 6777777888888888888888888899999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 039402 1071 FVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEW 1150 (1496)
Q Consensus 1071 ~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1150 (1496)
.+..++++..+.-+..+..|+..+......+...++..|++.|+.|||+.+.|++|..++.+..+++.+..+.......|
T Consensus 299 ~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~ 378 (709)
T COG2274 299 VLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALI 378 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 87777777666666666666666667777788889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCC
Q 039402 1151 LGLRLDMLSSITFAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPL 1229 (1496)
Q Consensus 1151 l~~rl~~l~~~~~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1229 (1496)
......++..+.....+++ ......|.++.|..-.+.+....+.+++..++..+.++++...+.||+.+.++.|+|.+.
T Consensus 379 ~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~ 458 (709)
T COG2274 379 LNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG 458 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 9888888887766666655 445568889999998889999999999999999999999999999999999999988642
Q ss_pred CccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCe
Q 039402 1230 AIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI 1309 (1496)
Q Consensus 1230 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1309 (1496)
+..+...|+..|+|+|+||+|+|+++.|++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||+
T Consensus 459 ---~~~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~ 535 (709)
T COG2274 459 ---DKTLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGV 535 (709)
T ss_pred ---ccccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 22245566779999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred eCCCCChHHHhcccEEEcccccccccchhhccCCCC-CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1310 DISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE-ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1310 dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
|++.+++++||++|++||||++||+||||||+...+ +.+||||++|++.++++|+|.++|.||||+|+|+|.|||||||
T Consensus 536 dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQr 615 (709)
T COG2274 536 DLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQR 615 (709)
T ss_pred eHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHH
Confidence 999999999999999999999999999999998654 6789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHh
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
||++||||++++|+|||||||||+||++||+.|++.|.+...+||+|+||||++|+++||||+|||+|+|+|+|+|+||+
T Consensus 616 QrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 616 QRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHHHHH
Q 039402 1469 ENKSSSFSQLVAEY 1482 (1496)
Q Consensus 1469 ~~~~s~F~~l~~~~ 1482 (1496)
+. +|.|+++++.+
T Consensus 696 ~~-~g~y~~l~~~q 708 (709)
T COG2274 696 AQ-GGLYARLYQQQ 708 (709)
T ss_pred Hh-cChHHHHHhcc
Confidence 87 89999998754
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.8e-80 Score=786.05 Aligned_cols=544 Identities=28% Similarity=0.389 Sum_probs=458.1
Q ss_pred HHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 039402 931 LLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFR 1010 (1496)
Q Consensus 931 ~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ 1010 (1496)
+++.++...+.+..++++.+..+... ........+...++++.++..++.++..++..+.+.+....++.++++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 97 (567)
T COG1132 20 ILLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLR 97 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445556667777777764442211 0111122344455555666777777778888888899999999999999999
Q ss_pred CccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1011 APMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSAR 1090 (1496)
Q Consensus 1011 ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r 1090 (1496)
.|+++|+.+++|++++|+++|++.++..+......+...++.+++.+++++..+|.+.++++...+++.+....+.+..+
T Consensus 98 ~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~ 177 (567)
T COG1132 98 LPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSR 177 (567)
T ss_pred CCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888666666788888999999999998888777766666666666665668
Q ss_pred HHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 039402 1091 ELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVF- 1169 (1496)
Q Consensus 1091 ~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~- 1169 (1496)
+..+......+.+.+.+.|+++|+.+||+|+.++...+++.+..+...+...........+.....++..+.......+
T Consensus 178 ~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (567)
T COG1132 178 KLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALG 257 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999999999999999887777777766666554444444444333344443333322222
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEE
Q 039402 1170 LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLL 1249 (1496)
Q Consensus 1170 ~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~ 1249 (1496)
......+.++.|.....+.|...+...+..+...+..++....|.||+.++.+.+++... ... +.++..|.|+|+
T Consensus 258 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~--~~~~~~~~I~f~ 332 (567)
T COG1132 258 GFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED---PPD--PLKDTIGSIEFE 332 (567)
T ss_pred HHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCC--CCCCCCCeEEEE
Confidence 223456678999999999999999999999999999999999999999999987654221 111 134567889999
Q ss_pred eEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEccc
Q 039402 1250 DLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQD 1329 (1496)
Q Consensus 1250 nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQd 1329 (1496)
||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++.+||++|++||||
T Consensus 333 ~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 333 NVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred EEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 999999864 4699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhccCCCCC-CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEc
Q 039402 1330 PVMFEGTVRSNLDPLEE-STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDE 1408 (1496)
Q Consensus 1330 p~LF~gTIR~NLdp~~~-~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDE 1408 (1496)
|+||+||||+||++..+ ++|||+++|+++++++|+|.++|+||||.|||+|.+||||||||+|||||+||+|+||||||
T Consensus 412 ~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDE 491 (567)
T COG1132 412 PLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDE 491 (567)
T ss_pred ceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 99999999999998864 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHh
Q 039402 1409 ATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYT 1483 (1496)
Q Consensus 1409 aTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~ 1483 (1496)
|||++|++||+.||+++++..+++|+|+||||++|+.+||+|+|||+|+|+|+|+|+||+++ +|.|++|+++..
T Consensus 492 aTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 492 ATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQG 565 (567)
T ss_pred cccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhh
Confidence 99999999999999999988889999999999999999999999999999999999999986 899999998765
No 12
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.1e-78 Score=786.16 Aligned_cols=558 Identities=22% Similarity=0.317 Sum_probs=460.6
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 911 FSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLA 990 (1496)
Q Consensus 911 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~ 990 (1496)
+..+++|++.... .+...+++.++..++.++.++++....+..............+.+++++.++..++.+++..+..
T Consensus 149 ~~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 226 (711)
T TIGR00958 149 LFRLLGLSGRDWP--WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFN 226 (711)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555554322 22334444566667777777777654432111111111122345556666777888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 039402 991 TAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIV 1070 (1496)
Q Consensus 991 ~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1070 (1496)
..+.+...+++.++++++++.|++||+++++|+++||+++|++.++..+...+..++..++.+++.+++++..+|++.++
T Consensus 227 ~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~ 306 (711)
T TIGR00958 227 YTMARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMV 306 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHH--
Q 039402 1071 FVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAM-- 1148 (1496)
Q Consensus 1071 ~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~-- 1148 (1496)
++..+++.+++..++.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+.........
T Consensus 307 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (711)
T TIGR00958 307 TLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAG 386 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766666666666666666666666667777788899999999999999999999999999988887766554443322
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCC
Q 039402 1149 -EWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEP 1227 (1496)
Q Consensus 1149 -~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~ 1227 (1496)
.|....+..+..+.+... .......|.+++|.+..++.|...+...+..+...+.++++...+.+|+.++++.+++.
T Consensus 387 ~~~~~~~~~~~~~~~il~~--g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~ 464 (711)
T TIGR00958 387 YLWTTSVLGMLIQVLVLYY--GGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNI 464 (711)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 233222222222211111 12234578899999999999999999999999999999999999999999999876654
Q ss_pred CCCccCCCCCCCCCCcceEEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEE
Q 039402 1228 PLAIEESRPNDSWPSHGKIDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILI 1306 (1496)
Q Consensus 1228 ~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I 1306 (1496)
+.. .....++..|.|+|+||+|+|+++ .+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|++
T Consensus 465 ~~~----~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 465 PLT----GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred CCC----CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 321 111223557899999999999753 357999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 039402 1307 DGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1385 (1496)
Q Consensus 1307 DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1385 (1496)
||+|+++++.+++|++|++|||||.+|+|||||||... ++.+|+++++|+++++++++++++|+|+||.++|+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 99999999999999999999999999999999999865 56889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChh
Q 039402 1386 GQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1386 GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~ 1465 (1496)
|||||++||||++|+|+|||||||||+||++|++.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~ 698 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHK 698 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHH
Confidence 99999999999999999999999999999999999999 3445899999999999999999999999999999999999
Q ss_pred hHhhcCCcHHHHHH
Q 039402 1466 NLLENKSSSFSQLV 1479 (1496)
Q Consensus 1466 ~Ll~~~~s~F~~l~ 1479 (1496)
||+++ ++.|++|+
T Consensus 699 eL~~~-~~~y~~lv 711 (711)
T TIGR00958 699 QLMED-QGCYKHLV 711 (711)
T ss_pred HHHhC-CCchHhcC
Confidence 99975 57898874
No 13
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.3e-78 Score=772.29 Aligned_cols=564 Identities=18% Similarity=0.229 Sum_probs=452.8
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 912 SVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPV-VTGSTLLIVYVALAVGSSFCVLARSTLLA 990 (1496)
Q Consensus 912 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~-~~~~~~l~vy~~l~~~~~~~~~~~~~~~~ 990 (1496)
+.+++|++...+.. .+.+++.++..++.++.++.+.+..+........ .....++.+++++.++..++.+++.++..
T Consensus 11 ~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 11 RWLKQQSKPAKRWL--NLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred HHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44666666543332 2333344555566666666666544311000001 11222344455566667778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 039402 991 TAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIV 1070 (1496)
Q Consensus 991 ~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1070 (1496)
..+.+....++.++++++++.|+++|+..++|++++|+++|++.++..+...+..++..++.+++.++++++++|++.++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 168 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLI 168 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888888888888888999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 039402 1071 FVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEW 1150 (1496)
Q Consensus 1071 ~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1150 (1496)
++..+++..++..++.+..++..+......+.+.+++.|+++|+.+||+|++|+++.+++.+..+...+..........+
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK11174 169 LLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFL 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666665566666666667777777777888999999999999999999999999999988888877766655544444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhh
Q 039402 1151 LGLRLDMLSSITFAFTLVFLISIPKGFIDPAIA---------GLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYT 1221 (1496)
Q Consensus 1151 l~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~---------gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~ 1221 (1496)
......++..+...+.+++......|.++.|.. -+++.+...+..++..+...+.++.....+.+|+.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 328 (588)
T PRK11174 249 SSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFL 328 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444332222211111111244444422 22234555667778888888889999999999999999
Q ss_pred cCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCc
Q 039402 1222 CIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAA 1301 (1496)
Q Consensus 1222 ~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~ 1301 (1496)
+.|++++.. ...+ ...+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|++ |++
T Consensus 329 ~~~~~~~~~--~~~~-~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 329 ETPLAHPQQ--GEKE-LASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred cCCCcccCC--Cccc-cCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 877653211 1111 111234679999999988655 56999999999999999999999999999999999999 999
Q ss_pred cEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 039402 1302 GQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1380 (1496)
Q Consensus 1302 G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1380 (1496)
|+|.+||+|+++++.+++|++|+||||||+||+|||||||... ++++|||+++|++.|+++++|.++|+|+||.|||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 9999999999999999999999999999999999999999876 479999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeE
Q 039402 1381 ENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1381 ~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE 1460 (1496)
.|||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e 563 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQ 563 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEee
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred ecChhhHhhcCCcHHHHHHHHHh
Q 039402 1461 FDNPANLLENKSSSFSQLVAEYT 1483 (1496)
Q Consensus 1461 ~g~p~~Ll~~~~s~F~~l~~~~~ 1483 (1496)
.|+|++|+++ ++.|++|++.+.
T Consensus 564 ~G~~~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 564 QGDYAELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred cCCHHHHHhc-chHHHHHHHHhh
Confidence 9999999975 689999987653
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.8e-77 Score=776.32 Aligned_cols=544 Identities=21% Similarity=0.239 Sum_probs=458.9
Q ss_pred HHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 929 FILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCI 1008 (1496)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~l 1008 (1496)
.++++.++..++.++.++.+....+.............+..+++++.++..++.+++.++....+.+....++.++++++
T Consensus 140 ~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 219 (686)
T TIGR03797 140 AILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRL 219 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566677777777777655432111111111122345556666777888899999999999999999999999999
Q ss_pred hcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1009 FRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISS 1088 (1496)
Q Consensus 1009 l~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~ 1088 (1496)
++.|++||++.++|++++|++ |++.+...+...+...+..++..++.++++++++|++.++++.++++++.+..++.+.
T Consensus 220 l~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~ 298 (686)
T TIGR03797 220 LRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLL 298 (686)
T ss_pred HcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997 7888888887777777777777777888888999988877666555555444444444
Q ss_pred HHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1089 ARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLV 1168 (1496)
Q Consensus 1089 ~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~ 1168 (1496)
.+...+......+...+++.|+++|+.|||+|+.|+++.+++.+..+...+..+.......|.......+..+...+..+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 378 (686)
T TIGR03797 299 QVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFA 378 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555556677899999999999999999999999999999999988888888777777776666655443333332
Q ss_pred H-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEE
Q 039402 1169 F-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKID 1247 (1496)
Q Consensus 1169 ~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1247 (1496)
+ ......|.++.|.+-.+.++...+..++..+...+.+++....+.+|+.++++.|+|.+.. ..+ ..+..|.|+
T Consensus 379 ~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~---~~~--~~~~~~~I~ 453 (686)
T TIGR03797 379 AAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA---KTD--PGKLSGAIE 453 (686)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC---cCC--CCCCCceEE
Confidence 2 2334578899998888888999999999999999999999999999999999877664311 111 123457899
Q ss_pred EEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEc
Q 039402 1248 LLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIP 1327 (1496)
Q Consensus 1248 f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1327 (1496)
|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|++||+|+++++.+++|++|++||
T Consensus 454 ~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~ 533 (686)
T TIGR03797 454 VDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVL 533 (686)
T ss_pred EEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEc
Confidence 99999999876678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEE
Q 039402 1328 QDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLD 1407 (1496)
Q Consensus 1328 Qdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLD 1407 (1496)
|||.+|+|||||||.....++|+|+++|++.+++++++.++|+|+||+++|+|.|||||||||++||||++++|+|||||
T Consensus 534 Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLD 613 (686)
T TIGR03797 534 QNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFD 613 (686)
T ss_pred cCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999987668999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHH
Q 039402 1408 EATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAE 1481 (1496)
Q Consensus 1408 EaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~ 1481 (1496)
||||+||++||+.|++.|++. ++|+|+||||++++.+||+|+|||+|+|+|.|+|++|+++ ++.|++|+++
T Consensus 614 EpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~~~ 684 (686)
T TIGR03797 614 EATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLARR 684 (686)
T ss_pred CCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHHHh
Confidence 999999999999999999986 6899999999999999999999999999999999999974 7899999874
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.4e-77 Score=778.96 Aligned_cols=564 Identities=21% Similarity=0.294 Sum_probs=471.3
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 910 GFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLL 989 (1496)
Q Consensus 910 ~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~ 989 (1496)
.++.++.+++...+. ...++++.++.+++.++.++.+....+.............+..+++++.++..++.+++.++.
T Consensus 141 ~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (710)
T TIGR03796 141 LLRALWRRLRGSRGA--LLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYL 218 (710)
T ss_pred cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666776654332 233444456666777777777765543211111111112334555556677778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 039402 990 ATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFI 1069 (1496)
Q Consensus 990 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1069 (1496)
...+.+....++.++++++++.|++||++.++|++++|++.| ..+...+...+..++..++.+++.++++++++|++++
T Consensus 219 ~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 297 (710)
T TIGR03796 219 RRLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTL 297 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 5677777777778888888888888899999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 039402 1070 VFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAME 1149 (1496)
Q Consensus 1070 ~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1149 (1496)
+.+.+++++.++..++.+..++..+......+...+++.|+++|+.+||+++.|+.+.+++.+..++..+..........
T Consensus 298 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (710)
T TIGR03796 298 IGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQ 377 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777666666666666666666666667778889999999999999999999999999999888888877777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCC
Q 039402 1150 WLGLRLDMLSSITFAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPP 1228 (1496)
Q Consensus 1150 wl~~rl~~l~~~~~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~ 1228 (1496)
|.......+..+...+..++ ......|.++.|.+..++++...+...+..+...+.++.....+++|+.++++.|+|.+
T Consensus 378 ~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 457 (710)
T TIGR03796 378 ILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPL 457 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 66665555554433332222 23345788999999999999999999999999999999999999999999998877653
Q ss_pred CCccC--C-CCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEE
Q 039402 1229 LAIEE--S-RPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQIL 1305 (1496)
Q Consensus 1229 ~~~~~--~-~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ 1305 (1496)
..... . ...+.++..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 537 (710)
T TIGR03796 458 LEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEIL 537 (710)
T ss_pred cccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 22100 0 01111345689999999999987667899999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCC-CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCC
Q 039402 1306 IDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE-ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWS 1384 (1496)
Q Consensus 1306 IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1384 (1496)
+||+|+++++.+++|++|++|||||.+|+|||||||..++ +++|+++++|++.+++++++.++|+|+||.++|+|.|||
T Consensus 538 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LS 617 (710)
T TIGR03796 538 FDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLS 617 (710)
T ss_pred ECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCC
Confidence 9999999999999999999999999999999999998764 689999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecCh
Q 039402 1385 MGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNP 1464 (1496)
Q Consensus 1385 ~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p 1464 (1496)
||||||++||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++.+||||+|||+|+|+|.|+|
T Consensus 618 GGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~ 695 (710)
T TIGR03796 618 GGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTH 695 (710)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCH
Confidence 9999999999999999999999999999999999999999987 58999999999999999999999999999999999
Q ss_pred hhHhhcCCcHHHHHH
Q 039402 1465 ANLLENKSSSFSQLV 1479 (1496)
Q Consensus 1465 ~~Ll~~~~s~F~~l~ 1479 (1496)
++|+++ ++.|++|+
T Consensus 696 ~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 696 EELWAV-GGAYARLI 709 (710)
T ss_pred HHHHHc-CCcHHHHh
Confidence 999975 68899886
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5.2e-77 Score=776.40 Aligned_cols=562 Identities=22% Similarity=0.280 Sum_probs=462.0
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 910 GFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLL 989 (1496)
Q Consensus 910 ~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~ 989 (1496)
+++.++.|++...+. ...++++.++..++.++.++++....+.............+..+++++.++..++.+++.++.
T Consensus 143 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 143 SLLKFIPLITRQKKL--IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred hHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667777654332 233445556667777888888876654221111001112233344455566777888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 039402 990 ATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFI 1069 (1496)
Q Consensus 990 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1069 (1496)
...+.+....++.++++++++.|+.||++.++|++++|++ |...+...+...+...+..++.+++.++++++++|++++
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 299 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFL 299 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999999999999999999998 777777666666666666666777777778889999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 039402 1070 VFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAME 1149 (1496)
Q Consensus 1070 ~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1149 (1496)
+++..++++..+...+.+..++..+......+...+++.|+++|+.|||+|+.|+++.+++.+..+...+..+.......
T Consensus 300 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (708)
T TIGR01193 300 LSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQ 379 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666666666666667777777777888899999999999999999999999999998888877777665554444
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCC
Q 039402 1150 WLGLRLDMLSSITFAFTLV-FLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPP 1228 (1496)
Q Consensus 1150 wl~~rl~~l~~~~~~~~~~-~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~ 1228 (1496)
+......++..+...++++ .......|.+++|.+..+.++...+..++..+...+.+++....+++|+.++++.|+|.+
T Consensus 380 ~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 459 (708)
T TIGR01193 380 GQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFI 459 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 4333333333222222111 123345788999999999999999999999999999999999999999999998887753
Q ss_pred CCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC
Q 039402 1229 LAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG 1308 (1496)
Q Consensus 1229 ~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1308 (1496)
... .....++..|.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|+|||
T Consensus 460 ~~~---~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg 535 (708)
T TIGR01193 460 NKK---KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNG 535 (708)
T ss_pred ccc---cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECC
Confidence 211 112234557899999999999744 5699999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChHHHhcccEEEcccccccccchhhccCCC--CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 039402 1309 IDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL--EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1386 (1496)
Q Consensus 1309 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1386 (1496)
+|+++++.+++|++|+||||||.||+|||||||... ++++|+++++|++.+++++++.++|+||||.++|+|.+||||
T Consensus 536 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgG 615 (708)
T TIGR01193 536 FSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGG 615 (708)
T ss_pred EEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHH
Confidence 999999999999999999999999999999999875 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhh
Q 039402 1387 QRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1387 QrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
||||++||||++++|+|||||||||+||++|++.|++.|++ .+++|+|+||||++++..||+|+||++|+++|.|+|++
T Consensus 616 QrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~-~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~ 694 (708)
T TIGR01193 616 QKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLN-LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDE 694 (708)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHH-hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999999997 47899999999999999999999999999999999999
Q ss_pred HhhcCCcHHHHHHH
Q 039402 1467 LLENKSSSFSQLVA 1480 (1496)
Q Consensus 1467 Ll~~~~s~F~~l~~ 1480 (1496)
|+++ +|.|++|++
T Consensus 695 L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 695 LLDR-NGFYASLIH 707 (708)
T ss_pred HHhc-CCcHHHHhh
Confidence 9975 689999874
No 17
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.3e-76 Score=756.44 Aligned_cols=547 Identities=26% Similarity=0.353 Sum_probs=450.4
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 930 ILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTG--STLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYC 1007 (1496)
Q Consensus 930 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~--~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ 1007 (1496)
.+++.++..++.++.++++.+..+......+.... ..+..+++++.++..++.+++.++....+.+...+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 107 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDA 107 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445666667777777777655321110110000 1122334445556667778888888899999999999999999
Q ss_pred HhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1008 IFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYIS 1087 (1496)
Q Consensus 1008 ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~ 1087 (1496)
++++|+++|+..+.|++++|+++|++.++..+...+..++..++.+++.++++++.+|++.++++..+++.+.+...+.+
T Consensus 108 l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~ 187 (592)
T PRK10790 108 ALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQR 187 (592)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888888888888889899998876554433333333444444
Q ss_pred HHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 039402 1088 SARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWL-GLRLDMLSSITFAFT 1166 (1496)
Q Consensus 1088 ~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl-~~rl~~l~~~~~~~~ 1166 (1496)
..+...+......+...+++.|+++|+.+||+|+.++++.+++.+..+...+..+.......+. .....++..+...+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (592)
T PRK10790 188 YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGL 267 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555667788999999999999999999999999999888777666555444333322 222333333222221
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceE
Q 039402 1167 LVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKI 1246 (1496)
Q Consensus 1167 ~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1246 (1496)
.++......|.++.|.+..++.|...+..++..+...+.++++...+.+|+.++++.+++++.. ...++..+.|
T Consensus 268 ~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~------~~~~~~~~~i 341 (592)
T PRK10790 268 LMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN------DDRPLQSGRI 341 (592)
T ss_pred HHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC------CccCCCCCeE
Confidence 1111123578899999999999999999999999999999999999999999998866543211 1123345789
Q ss_pred EEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEE
Q 039402 1247 DLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSII 1326 (1496)
Q Consensus 1247 ~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1326 (1496)
+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||
T Consensus 342 ~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v 420 (592)
T PRK10790 342 DIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMV 420 (592)
T ss_pred EEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999754 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEE
Q 039402 1327 PQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILML 1406 (1496)
Q Consensus 1327 pQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiL 1406 (1496)
||||.+|+||||+||.++++++|+++++|+++++++++++++|+||||.++|+|.+||||||||++||||++++|+||||
T Consensus 421 ~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illl 500 (592)
T PRK10790 421 QQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILIL 500 (592)
T ss_pred ccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999999999999888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhh
Q 039402 1407 DEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTL 1484 (1496)
Q Consensus 1407 DEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~ 1484 (1496)
|||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++|+++...
T Consensus 501 DEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~l~~~~~~ 577 (592)
T PRK10790 501 DEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQMYQLQLA 577 (592)
T ss_pred eCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHHHHHHHhh
Confidence 9999999999999999999999899999999999999999999999999999999999999976 6999999987644
No 18
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.6e-75 Score=748.05 Aligned_cols=506 Identities=23% Similarity=0.317 Sum_probs=447.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHH
Q 039402 971 YVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSI 1050 (1496)
Q Consensus 971 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~ 1050 (1496)
++++.++..++.+++.++....+.+....++..+++++++.|.++|+....|++++|+++|++.+...+...+..++..+
T Consensus 71 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~ 150 (582)
T PRK11176 71 VIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREG 150 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456667777888888888999999999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHH
Q 039402 1051 IRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRN 1130 (1496)
Q Consensus 1051 ~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~ 1130 (1496)
+.+++.++++.+.+|+++++++..+++.+++...+.+..++..+......+...+++.|.++|+.+||+|+.++++.+++
T Consensus 151 ~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~ 230 (582)
T PRK11176 151 ASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRF 230 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHH
Confidence 99999999999999998877666666655555555555566666666777889999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1131 MKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLEN 1209 (1496)
Q Consensus 1131 ~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~ 1209 (1496)
.+..+...+..........|.....+++..+...+.+.+ ......|.+++|.+.+++++...+...+..+...+..++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~ 310 (582)
T PRK11176 231 DKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQR 310 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888777777777776666665544333322 2334568899999999999999999999999999999999
Q ss_pred hHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHH
Q 039402 1210 KIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTL 1289 (1496)
Q Consensus 1210 ~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTL 1289 (1496)
...+.+|+.++.+.++|.+.. +....|..+.|+++||+|+|+++.+++|+|+||+|+|||++||||+||||||||
T Consensus 311 ~~~~~~ri~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTL 385 (582)
T PRK11176 311 GMAACQTLFAILDLEQEKDEG-----KRVIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTI 385 (582)
T ss_pred HHHHHHHHHHHhcCCCcCCCC-----CcCCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHH
Confidence 999999999999877653311 111124457899999999998766779999999999999999999999999999
Q ss_pred HHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC--CCCcHHHHHHHHHHcCCcHHHHh
Q 039402 1290 IQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL--EESTDEQIWEALDKCQLGDEVRK 1367 (1496)
Q Consensus 1290 l~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~i~~ 1367 (1496)
+++|+|+++|++|+|++||+|+++++.+++|++|+||||||++|+||||+||... ++++|+|++++++.+++++++++
T Consensus 386 l~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~ 465 (582)
T PRK11176 386 ANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINK 465 (582)
T ss_pred HHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999854 35899999999999999999999
Q ss_pred ccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhccc
Q 039402 1368 KEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDS 1447 (1496)
Q Consensus 1368 lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~ 1447 (1496)
+|+||||.++|+|.+||||||||++||||++++|+|||||||||+||++|++.|.+.|++..++||+|+||||++++.+|
T Consensus 466 lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~ 545 (582)
T PRK11176 466 MDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKA 545 (582)
T ss_pred cccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred CEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHH
Q 039402 1448 DLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEY 1482 (1496)
Q Consensus 1448 DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~ 1482 (1496)
|+|++|++|+|+|.|+|++|+++ ++.|++|++++
T Consensus 546 D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~ 579 (582)
T PRK11176 546 DEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQ 579 (582)
T ss_pred CEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHH
Confidence 99999999999999999999975 58999998765
No 19
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.2e-75 Score=761.85 Aligned_cols=554 Identities=23% Similarity=0.276 Sum_probs=458.5
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 910 GFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLL 989 (1496)
Q Consensus 910 ~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~ 989 (1496)
+++.++.+++...+. +..++++.++..++.++.++.+....+.............+..+++++.++..++.+++.++.
T Consensus 134 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (694)
T TIGR03375 134 PKHWFWSTLKESWPL--YRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFL 211 (694)
T ss_pred cchHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566666643332 234445556667777778887775543211111111112233344445566778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 039402 990 ATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFI 1069 (1496)
Q Consensus 990 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1069 (1496)
...+.+....++.++++++++.|++| +..++|++++|+ +|++.+...+...+...+..++.++..++++++++|++++
T Consensus 212 ~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 289 (694)
T TIGR03375 212 DVAGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVW 289 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999998 788999999999 7999999988887777777777777778888889998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 039402 1070 VFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAME 1149 (1496)
Q Consensus 1070 ~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1149 (1496)
+.+..+++++.+..++.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..+...+..+.......
T Consensus 290 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (694)
T TIGR03375 290 VPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSN 369 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665555555555566666666666667788899999999999999999999999999999988888777776666555
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCC
Q 039402 1150 WLGLRLDMLSSITFAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPP 1228 (1496)
Q Consensus 1150 wl~~rl~~l~~~~~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~ 1228 (1496)
+.....+++..+...+..++ ......|.+++|.+-.+++|...+...+..+...+.+++....+++|+.++++.|+|.+
T Consensus 370 ~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 449 (694)
T TIGR03375 370 LATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERP 449 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 55544444443322222222 23345788999999899999999999999999999999999999999999998877643
Q ss_pred CCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC
Q 039402 1229 LAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG 1308 (1496)
Q Consensus 1229 ~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1308 (1496)
.. .......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||
T Consensus 450 ~~---~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg 526 (694)
T TIGR03375 450 EG---TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDG 526 (694)
T ss_pred CC---CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 21 111111234678999999999976666799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChHHHhcccEEEcccccccccchhhccCCCC-CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1309 IDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE-ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1309 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
+|+++++++++|+++++|||||++|+|||||||...+ +++|+|+++|++.+++++++.++|+|+||.++|+|.||||||
T Consensus 527 ~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQ 606 (694)
T TIGR03375 527 VDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQ 606 (694)
T ss_pred EEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHH
Confidence 9999999999999999999999999999999999765 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhH
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
|||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|++|
T Consensus 607 rQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eL 686 (694)
T TIGR03375 607 RQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQV 686 (694)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred hhc
Q 039402 1468 LEN 1470 (1496)
Q Consensus 1468 l~~ 1470 (1496)
+++
T Consensus 687 l~~ 689 (694)
T TIGR03375 687 LEA 689 (694)
T ss_pred HHH
Confidence 875
No 20
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.3e-75 Score=737.27 Aligned_cols=560 Identities=20% Similarity=0.234 Sum_probs=451.1
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCC-CCCC---cccchHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 913 VYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTK-DVKP---VVTGSTLLIVYVALAVGSSFCVLARSTL 988 (1496)
Q Consensus 913 ~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~---~~~~~~~l~vy~~l~~~~~~~~~~~~~~ 988 (1496)
.+++|++...+.. .+.+++.++..++.++.++.+.|..+... ...+ ..........+.+++++..++.++..++
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (574)
T PRK11160 6 PFLKLYKRHWFML--SLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLV 83 (574)
T ss_pred HHHHHHhhhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555655433222 22333444555556666666665543110 0010 0001111223444556677778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 039402 989 LATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVF 1068 (1496)
Q Consensus 989 ~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 1068 (1496)
....+.+....++.++++++++.|+.+|++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|++.
T Consensus 84 ~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 84 SHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999899999999999999999999999998
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHH
Q 039402 1069 IVFVPAVGSC-IWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAA 1147 (1496)
Q Consensus 1069 ~~~ip~~~l~-~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~ 1147 (1496)
++++..+++. ..+..++.+..+...+......+.+.+.+.|+++|+.+||+|+.|+++.+++.+..+++.+........
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7664443332 334455556666666666778888999999999999999999999999999999998888877777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCC
Q 039402 1148 MEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYG-LTLNTLLATLIWFACDLENKIISVERIFQYTCIPSE 1226 (1496)
Q Consensus 1148 ~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~-l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E 1226 (1496)
..+.....+++..+..++...+......|.+++|....++.|. +.....+..+...+.++.....+.+|+.++++.|+|
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~ 323 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPE 323 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 6666555565554443333332222235667777655555554 333445666677788888999999999999987665
Q ss_pred CCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEE
Q 039402 1227 PPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILI 1306 (1496)
Q Consensus 1227 ~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I 1306 (1496)
.+.. ...+ ..+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++
T Consensus 324 ~~~~--~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i 399 (574)
T PRK11160 324 VTFP--TTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILL 399 (574)
T ss_pred CCCC--cccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 3211 0111 11345789999999999765557999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 039402 1307 DGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1385 (1496)
Q Consensus 1307 DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1385 (1496)
||+|+++++.+++|++|++|||||.+|+|||||||... ++.+|+++++|++++++++++.+ |+||||.+||+|.+|||
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSg 478 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSG 478 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCH
Confidence 99999999999999999999999999999999999864 46899999999999999999999 99999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChh
Q 039402 1386 GQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1386 GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~ 1465 (1496)
|||||++||||++++|+|||||||||++|++|++.|++.|++..+++|+|+||||++++.+||+|++|++|+++|.|+|+
T Consensus 479 GqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~ 558 (574)
T PRK11160 479 GEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQ 558 (574)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred hHhhcCCcHHHHHHH
Q 039402 1466 NLLENKSSSFSQLVA 1480 (1496)
Q Consensus 1466 ~Ll~~~~s~F~~l~~ 1480 (1496)
||+++ ++.|++|++
T Consensus 559 ~l~~~-~g~y~~l~~ 572 (574)
T PRK11160 559 ELLAQ-QGRYYQLKQ 572 (574)
T ss_pred HHHhc-CcHHHHHHh
Confidence 99975 789999986
No 21
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3.8e-74 Score=734.53 Aligned_cols=547 Identities=24% Similarity=0.325 Sum_probs=474.2
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039402 930 ILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIF 1009 (1496)
Q Consensus 930 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll 1009 (1496)
.+++.++..++....+++++...+.............+..+++++.++..++.+++.++....+.+....++..++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~ 98 (571)
T TIGR02203 19 AGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLL 98 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555566666666665433211111111112223445667777788888999999999999999999999999999
Q ss_pred cCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1010 RAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSA 1089 (1496)
Q Consensus 1010 ~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~ 1089 (1496)
+.|.++|+..+.|++++|+++|++.++..+...+..++..++.+++.++++++++|+++++++.++++..++...+.+..
T Consensus 99 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~ 178 (571)
T TIGR02203 99 GLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRL 178 (571)
T ss_pred cCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888787878888878
Q ss_pred HHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1090 RELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVF 1169 (1496)
Q Consensus 1090 r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~ 1169 (1496)
++..+......++..+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...+.+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (571)
T TIGR02203 179 RRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFI 258 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888889999999999999999999999999999999999999888887777777777666666655443333222
Q ss_pred -HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEE
Q 039402 1170 -LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDL 1248 (1496)
Q Consensus 1170 -~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f 1248 (1496)
......|.+++|.+..+++|...+..++..+...+.++.+...+.+|+.++.+.++|.+.. ..+.+ +..+.|++
T Consensus 259 g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~--~~~~~i~~ 333 (571)
T TIGR02203 259 ALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAIE--RARGDVEF 333 (571)
T ss_pred HHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCC--CCCCeEEE
Confidence 2334578899999999999999999999999999999999999999999999876654311 11111 24578999
Q ss_pred EeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcc
Q 039402 1249 LDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQ 1328 (1496)
Q Consensus 1249 ~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQ 1328 (1496)
+||+|+|+++.+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||+|+++++.+++|++++|+||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999997755679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhccCCCC--CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEE
Q 039402 1329 DPVMFEGTVRSNLDPLE--ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILML 1406 (1496)
Q Consensus 1329 dp~LF~gTIR~NLdp~~--~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiL 1406 (1496)
||.+|+||||+||..+. +++|++++++++++++++++.++|+||||.++|+|.+||||||||+|||||++++|+||+|
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999998663 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHH
Q 039402 1407 DEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEY 1482 (1496)
Q Consensus 1407 DEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~ 1482 (1496)
|||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+++ ++.|++++++.
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~~~~ 568 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYAQLHNMQ 568 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHHHHHHHh
Confidence 9999999999999999999999899999999999999999999999999999999999999976 68999987754
No 22
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.2e-74 Score=746.04 Aligned_cols=565 Identities=23% Similarity=0.305 Sum_probs=469.1
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 910 GFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLL 989 (1496)
Q Consensus 910 ~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~ 989 (1496)
+++.++.+++...+. ...++++.++..++.++.++.+....+.............+..+++++.++..++.+++.++.
T Consensus 126 ~~~~~~~~~~~~~~~--~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 126 GFSWFIPAIIRYRKQ--FREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666643332 223444456666667777777775543211111111122334455666667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 039402 990 ATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFI 1069 (1496)
Q Consensus 990 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1069 (1496)
...+.+....++.++++++++.|+.||+..++|++++|+ +|++.+...+...+..++..++.++..++++++++|++++
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 282 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTG 282 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 6999999888877777776666666677888889999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 039402 1070 VFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAME 1149 (1496)
Q Consensus 1070 ~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1149 (1496)
+++..++++..+..+..+..+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..+.......
T Consensus 283 i~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (694)
T TIGR01846 283 VVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGN 362 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76655555555444444444444455556667888999999999999999999999999999999988888887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCC
Q 039402 1150 WLGLRLDMLSSITFAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPP 1228 (1496)
Q Consensus 1150 wl~~rl~~l~~~~~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~ 1228 (1496)
+.....+++..+..++..++ ......|.++.|.+..+.++...+..++..+...+.+++....+.+|+.++++.|+|++
T Consensus 363 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 442 (694)
T TIGR01846 363 IAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPR 442 (694)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 76666666655443333222 23345788999999889999999999999999999999999999999999998877653
Q ss_pred CCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC
Q 039402 1229 LAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG 1308 (1496)
Q Consensus 1229 ~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1308 (1496)
.. ...+. .+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|+|||
T Consensus 443 ~~--~~~~~--~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 443 SA--GLAAL--PELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred CC--CCCCC--CCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 21 11111 123578999999999987767799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1309 IDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1309 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
+|+++++.+++|+++++|||||.+|+|||||||... ++++|+++++|++++++++++.++|+||||.++|+|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 999999999999999999999999999999999865 4689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhH
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
|||++||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++++..||+|+||++|+|+|.|+|++|
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hhcCCcHHHHHHHHH
Q 039402 1468 LENKSSSFSQLVAEY 1482 (1496)
Q Consensus 1468 l~~~~s~F~~l~~~~ 1482 (1496)
+++ +|.|++|+++.
T Consensus 679 ~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 679 LAL-QGLYARLWQQQ 692 (694)
T ss_pred HHc-CChHHHHHHhh
Confidence 975 68999998753
No 23
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-73 Score=678.64 Aligned_cols=512 Identities=23% Similarity=0.318 Sum_probs=447.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHH
Q 039402 965 STLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVG 1044 (1496)
Q Consensus 965 ~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~ 1044 (1496)
..+++.+++..++-.++.+.+......++.++...++.++++++.+.+..+-...|+|.+.+.++.-++.++..+...+.
T Consensus 40 ~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLP 119 (559)
T COG4988 40 LPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLP 119 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666677777888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhc
Q 039402 1045 AYAFSIIRILGTIAVMSQVAWQVFIVF---VPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFD 1121 (1496)
Q Consensus 1045 ~~~~~~~~~l~~~~~~~~~~~~~~~~~---ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~ 1121 (1496)
..+.+.+..+..++.+++.+|...+++ .|++++++++.. ..++...+..-.+-..+.+||-+.++|+.|+|+|+
T Consensus 120 q~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg---~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~ 196 (559)
T COG4988 120 QMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVG---LAAKDASEKQFSALARLSGHFLDRLRGLETLRAFG 196 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhc
Confidence 999999999999999999999876554 466666554432 23344444455566778899999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 039402 1122 QESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLIS-IPK-GFIDPAIAGLAVTYGLTLNTLLAT 1199 (1496)
Q Consensus 1122 ~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~-~~~-g~~~~g~~gl~l~y~l~l~~~l~~ 1199 (1496)
..+...++..+...++.+.++.....+---...+|++..+.++.++++... +.. |.++-...-+++..+--+..++..
T Consensus 197 ~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~ 276 (559)
T COG4988 197 RTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRD 276 (559)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999999888888888778888999988888777766433 233 566665555667777778888888
Q ss_pred HHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEE
Q 039402 1200 LIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIV 1279 (1496)
Q Consensus 1200 ~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIV 1279 (1496)
+-..+..-.+...+.+.+..+.+.|.+.+... ......|....+|+.+|++++|+++. ++++|+||+++|||++|||
T Consensus 277 lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~--~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~talv 353 (559)
T COG4988 277 LGSFFHAAAAGEAAADKLFTLLESPVATPGSG--EKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTALV 353 (559)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCc--cccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEEEE
Confidence 88888888888899999999998777654321 11123343445677779999998765 7999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCC-CCcHHHHHHHHHH
Q 039402 1280 GRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE-ESTDEQIWEALDK 1358 (1496)
Q Consensus 1280 GrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~ 1358 (1496)
|+||||||||+++|.|+.+|++|+|.+||+|..+++.+++|+++++|||+|++|+|||||||...+ +.+|+||++|+++
T Consensus 354 G~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~ 433 (559)
T COG4988 354 GASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQ 433 (559)
T ss_pred CCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998765 5899999999999
Q ss_pred cCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEc
Q 039402 1359 CQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIA 1438 (1496)
Q Consensus 1359 ~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IA 1438 (1496)
+++.|+++. |+||||.+||+|.+|||||+||++||||+|++++++++|||||+||.+||+.|++.|.+.++++|||+||
T Consensus 434 a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~it 512 (559)
T COG4988 434 AGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVIT 512 (559)
T ss_pred hcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEE
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhh
Q 039402 1439 HRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTL 1484 (1496)
Q Consensus 1439 HRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~ 1484 (1496)
||++.+.++|+|+|||+||++|.|+|++|.++ ++.|++|+++...
T Consensus 513 Hrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~~ 557 (559)
T COG4988 513 HRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQEG 557 (559)
T ss_pred cChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHhc
Confidence 99999999999999999999999999999975 6899999987654
No 24
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-75 Score=662.07 Aligned_cols=498 Identities=21% Similarity=0.334 Sum_probs=414.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 039402 978 SSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTI 1057 (1496)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~ 1057 (1496)
+.++.-+|+++......-+.+.+-.++++|+....+.|.-...+|+++.-+.+-.+.+. .+...+.++.-.++.+...+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~ 350 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAM 350 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhh
Confidence 35667788888888888899999999999999999999999999988877777666665 44444444445555554444
Q ss_pred HHH-HHHhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHH
Q 039402 1058 AVM-SQVAWQVFIVFVPAVGSCIWY----QQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMK 1132 (1496)
Q Consensus 1058 ~~~-~~~~~~~~~~~ip~~~l~~~~----~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~ 1132 (1496)
+.. ...+||+.+++..+..+|.+. ..+-.+..|.+..-+.+++ +.-.+++-+.+|+|-|++|++..+++.+
T Consensus 351 vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesr----Ar~vDsllNFETVKyy~Ae~yEverYre 426 (790)
T KOG0056|consen 351 VYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESR----ARQVDSLLNFETVKYYNAEDYEVERYRE 426 (790)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhh----hhhhhhhhcchhhhccCchhhhHHHHHH
Confidence 433 335778877777666666543 2333333344444444443 3456788899999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 039402 1133 LMDEYSRPTFHIAAAMEWLGLRLDMLSSITFA-FTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKI 1211 (1496)
Q Consensus 1133 ~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~-~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~ 1211 (1496)
.++++++..+........+...-+.+..+... .+++..+....+..+.|..-+..+|.+++.++++|+-..+..++++.
T Consensus 427 Ail~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nf 506 (790)
T KOG0056|consen 427 AILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNF 506 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhh
Confidence 99999998777665555544444333333222 22222333346777888888999999999999999999999999999
Q ss_pred hHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHH
Q 039402 1212 ISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQ 1291 (1496)
Q Consensus 1212 ~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~ 1291 (1496)
+-+||+.+.++.++|- .+.+..++---.+|.|+|+||+|.|.|+.| ||+||||+++||+.+|+||+||+||||+++
T Consensus 507 iDmEnmfdllkee~eV---vd~P~a~pl~~~~G~i~fsnvtF~Y~p~k~-vl~disF~v~pGktvAlVG~SGaGKSTimR 582 (790)
T KOG0056|consen 507 IDMENMFDLLKEEPEV---VDLPGAPPLKVTQGKIEFSNVTFAYDPGKP-VLSDISFTVQPGKTVALVGPSGAGKSTIMR 582 (790)
T ss_pred hhHHHHHHHhhcCchh---hcCCCCCCccccCCeEEEEEeEEecCCCCc-eeecceEEecCCcEEEEECCCCCchhHHHH
Confidence 9999999998754442 222222322235799999999999998864 999999999999999999999999999999
Q ss_pred HHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccC
Q 039402 1292 TLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEG 1370 (1496)
Q Consensus 1292 ~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~ 1370 (1496)
+|||+++.++|+|.|||+||+.+..+.||+.||+||||.+||++||..||... ...+|||+.+|.+.++++|.|.+.|+
T Consensus 583 lLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPe 662 (790)
T KOG0056|consen 583 LLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPE 662 (790)
T ss_pred HHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCch
Confidence 99999999999999999999999999999999999999999999999999864 47899999999999999999999999
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEE
Q 039402 1371 KLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLV 1450 (1496)
Q Consensus 1371 gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrI 1450 (1496)
|++|.|||+|-.||||||||+++||++||+|.|++||||||+||..||+.||..+.+..+++|.|+||||++||.++|.|
T Consensus 663 gY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~I 742 (790)
T KOG0056|consen 663 GYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLI 742 (790)
T ss_pred hhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhh
Q 039402 1451 LLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTL 1484 (1496)
Q Consensus 1451 lVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~ 1484 (1496)
+|+++|+|+|.|+|+||+++++|.|++|++....
T Consensus 743 Lvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qqa 776 (790)
T KOG0056|consen 743 LVISNGRIVERGRHEELLKRDGGAYADMWQAQQA 776 (790)
T ss_pred EEEeCCeEeecCcHHHHHhccCCcHHHHHHHHHh
Confidence 9999999999999999999999999999965554
No 25
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-72 Score=658.34 Aligned_cols=500 Identities=21% Similarity=0.292 Sum_probs=429.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHH
Q 039402 974 LAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRI 1053 (1496)
Q Consensus 974 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~ 1053 (1496)
+++...+.-++-.+......++.-.+++.++++++...+..-...-..|+++||+..|++.+|+..-..+...+..+...
T Consensus 67 ~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~ 146 (573)
T COG4987 67 LAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLI 146 (573)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHH
Confidence 34444455555555666777888899999999999999888899999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHH
Q 039402 1054 LGTIAVMSQVAWQVFIVFVP-AVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMK 1132 (1496)
Q Consensus 1054 l~~~~~~~~~~~~~~~~~ip-~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~ 1132 (1496)
.++.+.+++.+|++.+.+.. ++++...+.-.+.+..|...+.-...+..+.++|.|.+.|....+.||.+++|.+.+..
T Consensus 147 ~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~ 226 (573)
T COG4987 147 AVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEA 226 (573)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHH
Confidence 88888888899888765443 34444556666677777787777888999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Q 039402 1133 LMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFT-LVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLI-WFACDLENK 1210 (1496)
Q Consensus 1133 ~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~-~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i-~~~~~le~~ 1210 (1496)
..+.+.+..........|-.+.+.++.++.++.. +++......|..+...+.+++.-.+.....+.-+. ..+.++...
T Consensus 227 ~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~ 306 (573)
T COG4987 227 TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQV 306 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHH
Confidence 9999999999999999999999999988776633 33344355565553223232222223333333333 455788888
Q ss_pred HhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcc-eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHH
Q 039402 1211 IISVERIFQYTCIPSEPPLAIEESRPNDSWPSHG-KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTL 1289 (1496)
Q Consensus 1211 ~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g-~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTL 1289 (1496)
.-|.+|+.+..+.++|..... +.-|..+ .++++||+|+|+.+.++||+|+||++++||||||+||||||||||
T Consensus 307 ~~Sa~Rl~~i~~q~~e~~~~~------~~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTl 380 (573)
T COG4987 307 IASARRLNDILDQKPEVTFPD------EQTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTL 380 (573)
T ss_pred HHHHHHHhhhccCCcccCCCc------cccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHH
Confidence 999999999887766654321 1112222 899999999999988899999999999999999999999999999
Q ss_pred HHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhc
Q 039402 1290 IQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKK 1368 (1496)
Q Consensus 1290 l~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~l 1368 (1496)
+++|.|.++|++|+|..+|.+++.++.+++|+.|++++|.+++|+||+|+||... ++.||||+|+||++++|.+.+++.
T Consensus 381 lqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~ 460 (573)
T COG4987 381 LQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESA 460 (573)
T ss_pred HHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999753 478999999999999999999999
Q ss_pred cCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccC
Q 039402 1369 EGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSD 1448 (1496)
Q Consensus 1369 p~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~D 1448 (1496)
|+||+|.+||+|.+||||||||++|||+||++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+..+..||
T Consensus 461 p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~d 540 (573)
T COG4987 461 PDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMD 540 (573)
T ss_pred hhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCeEeEecChhhHhhcCCcHHHHHHH
Q 039402 1449 LVLLLNHGLIEEFDNPANLLENKSSSFSQLVA 1480 (1496)
Q Consensus 1449 rIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~ 1480 (1496)
||+|||+|+++|+|+|++|++ ++|.|++|.+
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc-cccHHHHHhc
Confidence 999999999999999999998 5799999875
No 26
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3.2e-72 Score=717.26 Aligned_cols=566 Identities=23% Similarity=0.297 Sum_probs=465.4
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 912 SVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLAT 991 (1496)
Q Consensus 912 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~ 991 (1496)
+.+++|++...+.. .+.+++.++..++.++.++.+....+.............++.+++++.++..++.+++.++...
T Consensus 7 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (576)
T TIGR02204 7 AALWPFVRPYRGRV--LAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTW 84 (576)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556665433222 2333345566666667777666444321000111112223444555555666777888888889
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 039402 992 AGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVF 1071 (1496)
Q Consensus 992 ~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1071 (1496)
.+.+....++..+++++++.|.++|+....|++++|+++|++.++..+...+..++..++.+++.+++++.++|++.+++
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888888888889999899999999988766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 039402 1072 VPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWL 1151 (1496)
Q Consensus 1072 ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1151 (1496)
+..+++.+.+..++.+..+...+.....+....+++.|.++|+.+||+|+.++++.+++.+..+...+..........|+
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555556666667777777788889999999999999999999999999999998888777766665555555
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCC
Q 039402 1152 GLRLDMLSSITFAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLA 1230 (1496)
Q Consensus 1152 ~~rl~~l~~~~~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~ 1230 (1496)
......+..+...+..++ ......|.+++|.+..+..|...+..++..+...+.++.+...+.+|+.++.+.++|.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 554444433222222222 2334578899999999999999999999999999999999999999999998876553211
Q ss_pred ccCCCCCCCCCCcceEEEEeEEeEeCCCC-CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCe
Q 039402 1231 IEESRPNDSWPSHGKIDLLDLQVRYAPQM-PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI 1309 (1496)
Q Consensus 1231 ~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1309 (1496)
. ...+..+|..+.|+++||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|++||+
T Consensus 325 ~--~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~ 402 (576)
T TIGR02204 325 A--HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGV 402 (576)
T ss_pred C--CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCE
Confidence 1 11112234557899999999997543 57999999999999999999999999999999999999999999999999
Q ss_pred eCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1310 DISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1310 dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
|+++++.+++|++++|+||||.+|+||||+||... ++.+|++++++++++++.+++.++|+|+||+++|+|.+||||||
T Consensus 403 ~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~ 482 (576)
T TIGR02204 403 DLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQR 482 (576)
T ss_pred EHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHH
Confidence 99999999999999999999999999999999864 46789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHh
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
||++||||++++|+||+||||||++|++|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+
T Consensus 483 Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~ 562 (576)
T TIGR02204 483 QRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELI 562 (576)
T ss_pred HHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHHHHH
Q 039402 1469 ENKSSSFSQLVAEY 1482 (1496)
Q Consensus 1469 ~~~~s~F~~l~~~~ 1482 (1496)
+ +++.|++|++.+
T Consensus 563 ~-~~~~~~~l~~~~ 575 (576)
T TIGR02204 563 A-KGGLYARLARLQ 575 (576)
T ss_pred H-cCChHHHHHhhc
Confidence 7 578999988653
No 27
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=7.2e-73 Score=715.29 Aligned_cols=507 Identities=22% Similarity=0.272 Sum_probs=415.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 930 ILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLI--VYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYC 1007 (1496)
Q Consensus 930 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~--vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ 1007 (1496)
.+++.++..++.++.++.+++..+..... .. ....+.. .++++.++..++.+++.++....+.+....++.+++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ 95 (529)
T TIGR02868 18 AILLGALALGSAVALLGVSAWLISRAAEM-PP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDR 95 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666666677666654321111 11 1111111 11234455666777788888888999999999999999
Q ss_pred HhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHH
Q 039402 1008 IFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIW-YQQYYI 1086 (1496)
Q Consensus 1008 ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~-~~~~y~ 1086 (1496)
+++.|.+||++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.+.++++..++++.+ ...++.
T Consensus 96 ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~ 175 (529)
T TIGR02868 96 LARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSL 175 (529)
T ss_pred hhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888889999989999999999999988876655444433 334444
Q ss_pred HHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1087 SSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFT 1166 (1496)
Q Consensus 1087 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~ 1166 (1496)
+..+...+......+.+.+++.|+++|+.+||+|+.++++.+++.+..+...+..........+......++..+...++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (529)
T TIGR02868 176 RAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGA 255 (529)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556666777889999999999999999999999999999998888877766665555554444444443333222
Q ss_pred HHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcce
Q 039402 1167 LVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGK 1245 (1496)
Q Consensus 1167 ~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1245 (1496)
.++ ......|.+++|.+...+.|...+...+..+...+.++.+...+.+|+.++.+.|+|.+... ...+...+|..+.
T Consensus 256 ~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~~~~~~~~~~~~ 334 (529)
T TIGR02868 256 LWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGV-VPAAGALGLGKPT 334 (529)
T ss_pred HHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC-CCCCcccCCCCce
Confidence 222 22345788999999999999999999999999999999999999999999998776533211 1111123445678
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+|+||+|+|+++. ++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|++++ .+++|++|++
T Consensus 335 I~~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~ 412 (529)
T TIGR02868 335 LELRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISV 412 (529)
T ss_pred EEEEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEE
Confidence 99999999997653 599999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred EcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEE
Q 039402 1326 IPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKIL 1404 (1496)
Q Consensus 1326 IpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~IL 1404 (1496)
|||||+||+|||||||... ++.+|||+++|++.|+++|++.++|+||||.+||+|.|||||||||+|||||++++|+||
T Consensus 413 V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~il 492 (529)
T TIGR02868 413 FAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPIL 492 (529)
T ss_pred EccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999975 468999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCc
Q 039402 1405 MLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRI 1441 (1496)
Q Consensus 1405 iLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl 1441 (1496)
|||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 493 iLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 493 LLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999988999999999996
No 28
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-74 Score=731.75 Aligned_cols=516 Identities=24% Similarity=0.319 Sum_probs=433.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHH
Q 039402 963 TGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSL 1042 (1496)
Q Consensus 963 ~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~ 1042 (1496)
....+.+.|+.++++..++.++...++.+.+.|...+++.+.+++++|+++.|||++..|.+..|+++|++.+++.+...
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geK 148 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEK 148 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHH
Confidence 34456777888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhcc
Q 039402 1043 VGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQ 1122 (1496)
Q Consensus 1043 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~ 1122 (1496)
+..++..+.++++.+++.++..|++.++.+++.++.......+.+..-.+...+...-+.--+...|++.+++|+.||+.
T Consensus 149 vg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~g 228 (1228)
T KOG0055|consen 149 VGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNG 228 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC
Confidence 99999999999999999999999999988877777666655555555555555556666777889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 039402 1123 ESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAF---TLVFL-ISIPKGFIDPAIAGLAVTYGLTLNTLLA 1198 (1496)
Q Consensus 1123 ~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~---~~~~~-~~~~~g~~~~g~~gl~l~y~l~l~~~l~ 1198 (1496)
|++..+++.+.++...+...... -|.++-....-.++++. ..++. ..+..+..++|.+..++.+.+.-...+.
T Consensus 229 q~~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLg 305 (1228)
T KOG0055|consen 229 EKKEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLG 305 (1228)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhh
Confidence 99999999998887766544332 23333333222222221 12221 2233456667665554444444444455
Q ss_pred HHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCC-CccceeeeEEeeCCcEEE
Q 039402 1199 TLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQM-PLVLQGISCTFPGGEKTG 1277 (1496)
Q Consensus 1199 ~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vLk~iS~~I~~Gekvg 1277 (1496)
...-....+.+...|.++|.+.++..++-....++.+. .--.+|.|||+||+|+|+... .++|+|+||+|++||.||
T Consensus 306 qa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~--~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~va 383 (1228)
T KOG0055|consen 306 QASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRV--LSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVA 383 (1228)
T ss_pred ccccchHHHhccccchHHHHHHhcCCCCCCcccccCCc--ccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEE
Confidence 55555666778888999999987643332111111111 123579999999999997543 369999999999999999
Q ss_pred EEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCC-CCcHHHHHHHH
Q 039402 1278 IVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE-ESTDEQIWEAL 1356 (1496)
Q Consensus 1278 IVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL 1356 (1496)
+||+|||||||++++|.|+|+|++|+|+|||.||.+++.++||++||+|.|||+||++||+|||.... +.|++||.+|+
T Consensus 384 lVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~ 463 (1228)
T KOG0055|consen 384 LVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAA 463 (1228)
T ss_pred EECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998765 78999999999
Q ss_pred HHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 039402 1357 DKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLT 1436 (1496)
Q Consensus 1357 ~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~ 1436 (1496)
+.++.+++|.++|+|+||.|||+|..||||||||+||||||+|+|+||+||||||+||+++|+.+|++|++..+++|.|+
T Consensus 464 k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTiv 543 (1228)
T KOG0055|consen 464 KAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIV 543 (1228)
T ss_pred HHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhh
Q 039402 1437 IAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTL 1484 (1496)
Q Consensus 1437 IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~ 1484 (1496)
|||||+||+++|+|+||++|+|+|.|+|+||++++ |.|++||+....
T Consensus 544 VaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q~~ 590 (1228)
T KOG0055|consen 544 VAHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQEL 590 (1228)
T ss_pred EeeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHHhh
Confidence 99999999999999999999999999999999886 999999987654
No 29
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5.7e-72 Score=714.97 Aligned_cols=550 Identities=19% Similarity=0.262 Sum_probs=452.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 927 VPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHY 1006 (1496)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 1006 (1496)
+.+++++.++..++.++.++++.+..+... +......++..++++.++..+..++...+......+....+..++++
T Consensus 21 ~~~~~~~~i~~~~~~~~~~~~~~~iid~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 97 (588)
T PRK13657 21 GILLAVANVLLAAATFAEPILFGRIIDAIS---GKGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFE 97 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555566777778888888876654321 11111222333444444444444444444455555666667779999
Q ss_pred HHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1007 CIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYI 1086 (1496)
Q Consensus 1007 ~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~ 1086 (1496)
++++.|..+|++.+.|++++|+++|++.+...+...+..++..++..++.+++++..+|+++++++.++++++.+..++.
T Consensus 98 ~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~ 177 (588)
T PRK13657 98 RIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVM 177 (588)
T ss_pred HHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887777777777777777777888888999888877777777777777787
Q ss_pred HHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1087 SSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFT 1166 (1496)
Q Consensus 1087 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~ 1166 (1496)
+..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (588)
T PRK13657 178 RKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAI 257 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888999999999999999999999999999999888888777766555555454444444333332222
Q ss_pred HHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcce
Q 039402 1167 LVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGK 1245 (1496)
Q Consensus 1167 ~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1245 (1496)
.++ ......|.+++|.+..++.|...+...+..+...+.++.....+.+|+.++.+.+++.+.. +...+.+ +..+.
T Consensus 258 ~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-~~~~~~~--~~~~~ 334 (588)
T PRK13657 258 LVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP-PGAIDLG--RVKGA 334 (588)
T ss_pred HHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-CCCCCcC--CCCCe
Confidence 222 3334578899999999999999999999999999999999999999999998765442211 1100111 23568
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++||+|+|+++ +++|+|+||+++|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++|+|
T Consensus 335 I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 413 (588)
T PRK13657 335 VEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAV 413 (588)
T ss_pred EEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEE
Confidence 9999999999744 569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEE
Q 039402 1326 IPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKIL 1404 (1496)
Q Consensus 1326 IpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~IL 1404 (1496)
+||||.+|+||||+||... ++.+|++++++++++++++++.++|+|+||.++|+|.+||||||||+|||||++++|+||
T Consensus 414 v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~il 493 (588)
T PRK13657 414 VFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPIL 493 (588)
T ss_pred EecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999865 468999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhh
Q 039402 1405 MLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTL 1484 (1496)
Q Consensus 1405 iLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~ 1484 (1496)
|||||||+||++|++.|.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++|+.+...
T Consensus 494 iLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 572 (588)
T PRK13657 494 ILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQGM 572 (588)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHhhc
Confidence 999999999999999999999998889999999999999999999999999999999999999975 6899999986643
No 30
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.2e-72 Score=675.13 Aligned_cols=548 Identities=23% Similarity=0.297 Sum_probs=459.7
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 292 IKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNG-RRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLG 370 (1496)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~-~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~ 370 (1496)
++.+.+..|+.+..+.++.++..+.....|.++.+++|.+.. .+. .....-....+....+.++++.....+..+..+
T Consensus 138 l~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~-~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~ 216 (716)
T KOG0058|consen 138 LLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDS-ADALKRACTILLGLFLIGALANAIRGGLLQYAG 216 (716)
T ss_pred HHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667789999999999999999999999999999998876 222 111112233444555667777777777777888
Q ss_pred HHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 039402 371 IRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADF-SWYIHDPWLVLFEVALSILILYKNLGIASLAALF 449 (1496)
Q Consensus 371 ~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~-~~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~ 449 (1496)
.++-..++..+|++.++....+++++.+||++++++.|++.+.+. ..++....-..++.+.++.+++..-.-.+++.++
T Consensus 217 ~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i 296 (716)
T KOG0058|consen 217 ERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLI 296 (716)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHH
Confidence 888888889999999999999999999999999999999999985 4567776667778777777766544444566677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 450 GTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSF 529 (1496)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~ 529 (1496)
.+.+++.+..++++..++..++..++..+-.+...|.|++||+||.|+-|+...++..+.=+.-.+..+|......+...
T Consensus 297 ~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~ 376 (716)
T KOG0058|consen 297 VVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFG 376 (716)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHh
Confidence 77777788888999999999999999999999999999999999999999877776654333323322332222222211
Q ss_pred H--HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccc
Q 039402 530 V--FWGAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVE 607 (1496)
Q Consensus 530 ~--~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~ 607 (1496)
. +......++++.+|.+++.++.+|.|...+++.+-..+..++..+...++.++++..+.+|+.++++.++.-+..-.
T Consensus 377 ~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~ 456 (716)
T KOG0058|consen 377 STNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGT 456 (716)
T ss_pred HHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCc
Confidence 1 11223456778889999999999999999999999999999999999999999999999999999976544332211
Q ss_pred CCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----
Q 039402 608 KQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----- 682 (1496)
Q Consensus 608 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~----- 682 (1496)
..|. ...+.|+++|++|+|+..++.++|+|+||+|+|||.||+|||||+||||+.++|+.+|+|++|+|.+||.
T Consensus 457 ~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~ 535 (716)
T KOG0058|consen 457 LAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDI 535 (716)
T ss_pred cccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhc
Confidence 1222 3456899999999999888889999999999999999999999999999999999999999999999994
Q ss_pred --------eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 --------KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 --------~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
+|+|.|+|-+|++||+|||.+|.+ .++|+.+++.+.++.++++..+|+|++|.+||+|..|||||||||||
T Consensus 536 ~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAI 615 (716)
T KOG0058|consen 536 NHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAI 615 (716)
T ss_pred CHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHH
Confidence 699999999999999999999985 67888999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcC-
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSG- 832 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~- 832 (1496)
||||++||.||||||.|||||++.+. +.++.+...++++|||+|+|+++.++.||+|+++++|++++.|+|+|+++..
T Consensus 616 ARALlr~P~VLILDEATSALDaeSE~-lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~ 694 (716)
T KOG0058|consen 616 ARALLRNPRVLILDEATSALDAESEY-LVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPN 694 (716)
T ss_pred HHHHhcCCCEEEEechhhhcchhhHH-HHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCcc
Confidence 99999999999999999999998854 5588888888999999999999999999999999999999999999999887
Q ss_pred cchHHHHHHh
Q 039402 833 TDFMELVGAH 842 (1496)
Q Consensus 833 ~~~~~~~~~~ 842 (1496)
+.|.++++.+
T Consensus 695 gly~~Lv~~q 704 (716)
T KOG0058|consen 695 GLYAKLVQRQ 704 (716)
T ss_pred cHHHHHHHHh
Confidence 5788887654
No 31
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.4e-71 Score=706.86 Aligned_cols=547 Identities=23% Similarity=0.270 Sum_probs=434.2
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 289 VKLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQ 368 (1496)
Q Consensus 289 ~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 368 (1496)
.+.++.+.+.+++.+++..++.++..++..+.|++++.++|.+..++......+.++.++++..++..++.....+...+
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFK 89 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34466677888999999999999999999999999999999764211111222334445555666777778778888889
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 039402 369 LGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAA 447 (1496)
Q Consensus 369 ~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~ 447 (1496)
.+.++...++..+|+|.++++....+++++|+++|++++|++++.+++. .+..++...+.+++++++++..-...+++.
T Consensus 90 ~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~ 169 (588)
T PRK11174 90 AGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLIL 169 (588)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998764 455566555555555554443333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHH----HHHHHHHHHHHHHHH
Q 039402 448 LFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIIN----LRKRETGWLKKYVYT 523 (1496)
Q Consensus 448 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~----~R~~E~~~l~~~~~~ 523 (1496)
++++++...+...+.+..++..++.++..+++.+.+.|.++|+++||.|+||+.+.+++.+ .++.+.+..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 170 LGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444555566778888888999999999999999999999999999999998888744 444444433332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 524 SAISSFVFWGAPTFVSVATFGTCILLNVPLESG---------KMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIAS 594 (1496)
Q Consensus 524 ~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~---------~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~ 594 (1496)
..+..++.. .+. +.++.++++.+. +.++.| .+++++.+...+..|+..++..+..+.+++++.+||.+
T Consensus 250 ~~~~~~~~~-~~~-~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFAS-ISI-ALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHH-HHH-HHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222211 111 122233333333 344444 44555566777889999999999999999999999999
Q ss_pred hhcCCCCCCccccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCc
Q 039402 595 FFCLDDLQPDLVEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS 674 (1496)
Q Consensus 595 fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~ 674 (1496)
+++.++.++..............++++|++|.|.. ++++|+|+||++++|+++||+||||||||||+++|+|++ |++
T Consensus 327 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 327 FLETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred HHcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 99876532211110001112235999999987742 368999999999999999999999999999999999999 899
Q ss_pred cEEEEcC-------------eeEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCC
Q 039402 675 GTLKLCG-------------TKAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERG 740 (1496)
Q Consensus 675 G~i~~~g-------------~~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g 740 (1496)
|+|.++| .++||||+|++|++||+|||.+|.+ .++++++++++.|+++++++.+|+|++|.+||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 9999999 4799999999999999999999965 8999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEE
Q 039402 741 INLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKIT 820 (1496)
Q Consensus 741 ~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~ 820 (1496)
.+|||||||||+||||+++||+|+||||||||||+++++++.+ .+....+++|+|+|||+++.++.||+|++|++|+++
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~ 562 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIV 562 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEe
Confidence 9999999999999999999999999999999999999999975 566667899999999999999999999999999999
Q ss_pred EecChHHHHhcCcchHHHHHHh
Q 039402 821 QAGKYNDLINSGTDFMELVGAH 842 (1496)
Q Consensus 821 ~~G~~~~l~~~~~~~~~~~~~~ 842 (1496)
++|+|+|++++++.|.+++..+
T Consensus 563 e~G~~~eL~~~~~~y~~l~~~q 584 (588)
T PRK11174 563 QQGDYAELSQAGGLFATLLAHR 584 (588)
T ss_pred ecCCHHHHHhcchHHHHHHHHh
Confidence 9999999999888888877543
No 32
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.2e-70 Score=699.48 Aligned_cols=563 Identities=20% Similarity=0.276 Sum_probs=452.2
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 914 YWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAG 993 (1496)
Q Consensus 914 y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~ 993 (1496)
+++|++...+ .+.+.+++.++..++.++.++.+++..+..... . ....++..++++.++..+..+++..+....+
T Consensus 10 l~~~l~~~k~--~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (585)
T TIGR01192 10 ALSYLNVHKN--RVLLIVIANITLAAITIAEPILFGRIIDAISSK-S--DVLPTLALWAGFGVFNTIAYVLVAREADRLA 84 (585)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455554332 223344455666677777777776654321111 1 1111222222333333334444444444555
Q ss_pred HHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 039402 994 YKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVP 1073 (1496)
Q Consensus 994 ~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip 1073 (1496)
.+....++.++++++++.|++||++.++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.+.++++.
T Consensus 85 ~~~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~ 164 (585)
T TIGR01192 85 HGRRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMV 164 (585)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666677799999999999999999999999999999999998888888887888888888888888999999888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 039402 1074 AVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGL 1153 (1496)
Q Consensus 1074 ~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1153 (1496)
+++++.++.+.+.+..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..+.......+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (585)
T TIGR01192 165 LGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASG 244 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777778888877888889999999999999999999999999999888888776665544433333333
Q ss_pred HHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCcc
Q 039402 1154 RLDMLSSITFAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIE 1232 (1496)
Q Consensus 1154 rl~~l~~~~~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~ 1232 (1496)
...++..+...+..++ ......|.+++|.+..+++|...+...+..+...+.++.....+.+|+.+..+.+++.+.
T Consensus 245 ~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~--- 321 (585)
T TIGR01192 245 LNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREE--- 321 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---
Confidence 2333332222222222 233457889999988889999999999999999999999999999999999876544221
Q ss_pred CCCCCCCCC-CcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeC
Q 039402 1233 ESRPNDSWP-SHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDI 1311 (1496)
Q Consensus 1233 ~~~~~~~wp-~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI 1311 (1496)
...+ ..++ ..+.|+++||+|+|+++ .++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+
T Consensus 322 ~~~~-~~~~~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~ 399 (585)
T TIGR01192 322 PADA-PELPNVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDI 399 (585)
T ss_pred CccC-CCCCCCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEh
Confidence 1111 1122 35689999999999754 3589999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1312 SLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1312 ~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
.+++.+++|++++++||||.+|+||||+||... ++.+|+|++++++.+++++++.++|+|+||.++|+|.+||||||||
T Consensus 400 ~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qr 479 (585)
T TIGR01192 400 NTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQR 479 (585)
T ss_pred hhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHH
Confidence 999999999999999999999999999999865 4679999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
++|||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++
T Consensus 480 l~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 559 (585)
T TIGR01192 480 LAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK 559 (585)
T ss_pred HHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999975
Q ss_pred CCcHHHHHHHHHhhccC
Q 039402 1471 KSSSFSQLVAEYTLRSS 1487 (1496)
Q Consensus 1471 ~~s~F~~l~~~~~~~~~ 1487 (1496)
++.|++|++.+....+
T Consensus 560 -~~~y~~l~~~~~~~~~ 575 (585)
T TIGR01192 560 -DGRFYKLLRRSGLLTN 575 (585)
T ss_pred -CChHHHHHHhCccccC
Confidence 6899999987765443
No 33
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.8e-71 Score=702.19 Aligned_cols=512 Identities=22% Similarity=0.274 Sum_probs=429.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHH
Q 039402 967 LLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAY 1046 (1496)
Q Consensus 967 ~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~ 1046 (1496)
++.+++++.++..++.+++.++....+.+....++.++++++++.|+++|++.++|++++|+++|++.+...+...+..+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~ 117 (569)
T PRK10789 38 WIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTL 117 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34445555556666777777788888999999999999999999999999999999999999999999987777777777
Q ss_pred HHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHH
Q 039402 1047 AFSIIRILGTIAVM-SQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESR 1125 (1496)
Q Consensus 1047 ~~~~~~~l~~~~~~-~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~ 1125 (1496)
+..++..++.++++ +.++|++.++++..+++..++.+.+.+..++..+......+.+.+++.|+++|+.+||+|+.+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~ 197 (569)
T PRK10789 118 VDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR 197 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHH
Confidence 77666655555555 47888887766665555555666665655666666666778899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1126 FRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLV-FLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFA 1204 (1496)
Q Consensus 1126 f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~-~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~ 1204 (1496)
+.+++.+..+...+..+.......+..........+...+... .......|.+++|.+..+..|...+..++..+...+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~ 277 (569)
T PRK10789 198 QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMF 277 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888777766655444444333333322222211111 123345788999998888889988988998999999
Q ss_pred HHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCC
Q 039402 1205 CDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGS 1284 (1496)
Q Consensus 1205 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGS 1284 (1496)
.+++....+.+|+.++.+.++|.+.. ..+.+ +..|.|+++||+|+|+++.+++|+|+||+|+|||++||||+|||
T Consensus 278 ~~~~~~~~a~~ri~~ll~~~~~~~~~---~~~~~--~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGs 352 (569)
T PRK10789 278 NIVERGSAAYSRIRAMLAEAPVVKDG---SEPVP--EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGS 352 (569)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCC---CCCCC--CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCC
Confidence 99999999999999999876543211 11111 23568999999999986556799999999999999999999999
Q ss_pred CHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcH
Q 039402 1285 GKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGD 1363 (1496)
Q Consensus 1285 GKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~ 1363 (1496)
|||||+++|.|+++|++|+|.+||.|+++++.+++|++++++||||.+|+||||+||... ++++|++++++++.+++++
T Consensus 353 GKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~ 432 (569)
T PRK10789 353 GKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHD 432 (569)
T ss_pred CHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999865 4689999999999999999
Q ss_pred HHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcch
Q 039402 1364 EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITS 1443 (1496)
Q Consensus 1364 ~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~t 1443 (1496)
++.++|+|+||.++|+|.+||||||||++||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||||+++
T Consensus 433 ~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~ 512 (569)
T PRK10789 433 DILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSA 512 (569)
T ss_pred HHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred hcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHhh
Q 039402 1444 VIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYTL 1484 (1496)
Q Consensus 1444 i~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~~ 1484 (1496)
+..||+|++|++|+++|.|+|++|+++ ++.|++|+.....
T Consensus 513 ~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 513 LTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred HHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 999999999999999999999999975 6899999976543
No 34
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.9e-71 Score=646.16 Aligned_cols=501 Identities=24% Similarity=0.364 Sum_probs=400.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHH
Q 039402 965 STLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVG 1044 (1496)
Q Consensus 965 ~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~ 1044 (1496)
...+..|.+..+++.+|..++.+.++....++-+....+.+++.+...+++|.+..+|.+-++..+-...+...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999998887777777777666666665
Q ss_pred HHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHH
Q 039402 1045 AYAFSIIRILGTIAVMSQ-VAWQVFIVFVPAVGSCIW----YQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRS 1119 (1496)
Q Consensus 1045 ~~~~~~~~~l~~~~~~~~-~~~~~~~~~ip~~~l~~~----~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRa 1119 (1496)
.++.+++.+......+.+ ..+.+.++++..+..|.. +.++--+..++..+ +.........|++.+-.+||+
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~----Adn~as~~~~dsL~Nye~VKs 229 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNN----ADNSASRRAYDSLINYEIVKS 229 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHh----hhhHHHHHHHHHHhhHHHHHH
Confidence 555555554443333222 233344433333333322 22222222333333 333444567789999999999
Q ss_pred hccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH----hcCCCCCHHHHHHHHHHHHHHH
Q 039402 1120 FDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFL-IS----IPKGFIDPAIAGLAVTYGLTLN 1194 (1496)
Q Consensus 1120 f~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~-~~----~~~g~~~~g~~gl~l~y~l~l~ 1194 (1496)
|+.|++..+++...+..+-+......+...-+ ++....++.+...++ +. ...+.++.+..-+..+...++.
T Consensus 230 fNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~l----nfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~ 305 (591)
T KOG0057|consen 230 FNNEEYEASRYDGSLKTYERAGLKYSSSLAFL----NFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLS 305 (591)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhHHhHHHHH----HHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHH
Confidence 99999999999999888877766554433333 333333333222221 11 1344566667777777778888
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCc
Q 039402 1195 TLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGE 1274 (1496)
Q Consensus 1195 ~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~Ge 1274 (1496)
..+..+-..++++-+.+.-++-.....+.... +.+. +++.-+..|.|+|+||++.|.|+. ++|+|+||+|++||
T Consensus 306 ~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~----i~~~-~~~i~~~~~~I~F~dV~f~y~~k~-~iL~gvsf~I~kGe 379 (591)
T KOG0057|consen 306 LPLNFLGSVYRELRQALTDMRTLFILLEVDED----IQEA-ALPIELFGGSIEFDDVHFSYGPKR-KVLKGVSFTIPKGE 379 (591)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhh----hhhc-cCCcccCCCcEEEEeeEEEeCCCC-ceecceeEEecCCC
Confidence 88888888888888877777665544321111 1111 122223457799999999998764 59999999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCC-CCcHHHHH
Q 039402 1275 KTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE-ESTDEQIW 1353 (1496)
Q Consensus 1275 kvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~ 1353 (1496)
||||||++||||||++++|+|+++ .+|+|+|||+||++++++.+|+.||+||||..||++||-+||...+ ..+|||+.
T Consensus 380 kVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~ 458 (591)
T KOG0057|consen 380 KVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVV 458 (591)
T ss_pred EEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999998654 78999999
Q ss_pred HHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcE
Q 039402 1354 EALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCT 1433 (1496)
Q Consensus 1354 ~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~T 1433 (1496)
+++++++++|.+.++|+|++|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|+....++|
T Consensus 459 e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rT 538 (591)
T KOG0057|consen 459 EACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRT 538 (591)
T ss_pred HHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred EEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHH
Q 039402 1434 VLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAE 1481 (1496)
Q Consensus 1434 VI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~ 1481 (1496)
+|+|+||++++++||+|+|||+|+|+|+|+|+||++ +++.|++++..
T Consensus 539 vI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~ 585 (591)
T KOG0057|consen 539 VIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTT 585 (591)
T ss_pred EEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhcc
Confidence 999999999999999999999999999999999998 77788777653
No 35
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2.3e-70 Score=692.48 Aligned_cols=518 Identities=21% Similarity=0.278 Sum_probs=428.0
Q ss_pred HHHHHHHHHHHHHhhhHHHhhcCCCC-CCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039402 931 LLAQTLFQILQIASNYWIVWATPGTK-DVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIF 1009 (1496)
Q Consensus 931 ~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll 1009 (1496)
+++.++..++.++.++.+.+..+... ..........+...++++.++..++.+++.++....+.+...+++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~ 88 (529)
T TIGR02857 9 GLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVA 88 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556666667776666554221 11111112234455666677778888899999999999999999999999999
Q ss_pred cCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1010 RAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSA 1089 (1496)
Q Consensus 1010 ~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~ 1089 (1496)
+.|..+|+..++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.+.++++..+++..++...+.+..
T Consensus 89 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~ 168 (529)
T TIGR02857 89 ALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAA 168 (529)
T ss_pred hCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888888888888888888888888999877665554444433333444444
Q ss_pred HHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 039402 1090 RELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTL-V 1168 (1496)
Q Consensus 1090 r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~-~ 1168 (1496)
+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..........+......++..+...+.. +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (529)
T TIGR02857 169 QAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVY 248 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555666788999999999999999999999999999888888777666666666666655555544333221 2
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEE
Q 039402 1169 FLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDL 1248 (1496)
Q Consensus 1169 ~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f 1248 (1496)
.......|.+++|.+..++.|...+...+..+...+..+.....+.+|+.++.+.+++... . .+...+..+.|+|
T Consensus 249 ~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~----~-~~~~~~~~~~i~~ 323 (529)
T TIGR02857 249 IGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG----K-APVTAAPAPSLEF 323 (529)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----C-cCCCCCCCCeEEE
Confidence 2222337889999888888888888888999999999999999999999999975543221 1 1111233468999
Q ss_pred EeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcc
Q 039402 1249 LDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQ 1328 (1496)
Q Consensus 1249 ~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQ 1328 (1496)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|+++++|||
T Consensus 324 ~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q 403 (529)
T TIGR02857 324 SGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQ 403 (529)
T ss_pred EEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcC
Confidence 99999998665579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEE
Q 039402 1329 DPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLD 1407 (1496)
Q Consensus 1329 dp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLD 1407 (1496)
||.+|+|||||||... ++.+|+++++|++.++++++++++|+||||.++|+|.+||||||||++||||++++|+|++||
T Consensus 404 ~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililD 483 (529)
T TIGR02857 404 HPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLD 483 (529)
T ss_pred CCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999999999999864 467999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEE
Q 039402 1408 EATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLL 1453 (1496)
Q Consensus 1408 EaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL 1453 (1496)
||||++|++|++.|++.|++..+++|+|+||||++++..||+|+||
T Consensus 484 E~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 484 EPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999988899999999999999999999986
No 36
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.8e-69 Score=680.85 Aligned_cols=549 Identities=24% Similarity=0.327 Sum_probs=472.3
Q ss_pred hhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 288 TVKLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQ 367 (1496)
Q Consensus 288 ~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~ 367 (1496)
..+.++..++-+|+.+.-..+..++..++.++.|++.+.++|.+-...+ ....+++++++++..+++.++.....+...
T Consensus 141 ~~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~-~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 141 GLSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS-RSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred chHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777778889988888999999999999999999999998865443 334566777888888899999988999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 039402 368 QLGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLA 446 (1496)
Q Consensus 368 ~~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~ 446 (1496)
.++.|+...+...+|+|.+++|..+++++++||++++++ |.++|.++.. .+.....-.+-.++.+++++.+-+.-+++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li 298 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLI 298 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999996 8999999864 33333333333444455566666677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 447 ALFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAI 526 (1496)
Q Consensus 447 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~ 526 (1496)
+++.+++.+.+..++.+..++..++.++...++.+.+.|.++||++||..+-|+.+..++++.-.+..+...+.......
T Consensus 299 ~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~ 378 (709)
T COG2274 299 VLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALI 378 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 88888888888888899999999999999999999999999999999999999999999988777777766665555544
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCc
Q 039402 527 SSFVFWGAP--TFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPD 604 (1496)
Q Consensus 527 ~~~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~ 604 (1496)
......... .-+.+++||++.++.+.+|.|.++++..+...+..|+..+.+.+..+.+++++.+|+.+.++.+..++.
T Consensus 379 ~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~ 458 (709)
T COG2274 379 LNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG 458 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 443333322 235567899999999999999999999999999999999999999999999999999999988755332
Q ss_pred cccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--
Q 039402 605 LVEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-- 682 (1496)
Q Consensus 605 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-- 682 (1496)
...........+.|+++|++|.|..+ +.++|+|+||+|++||++||+|+||||||||+|+|+|.++|++|+|.+||.
T Consensus 459 ~~~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl 537 (709)
T COG2274 459 DKTLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDL 537 (709)
T ss_pred ccccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeH
Confidence 21111122245679999999999854 348999999999999999999999999999999999999999999999994
Q ss_pred -----------eEEEccCCccCCCcHHHHhccCCCC-CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 683 -----------KAYVAQSPWIQSGKIEDNILFGKEM-NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 683 -----------~~yv~Q~~~i~~~ti~eNI~~g~~~-~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
++||+|++.+|+|||+|||.++.|. +.|+..++++..+.++++..+|.|++|.+||+|.+||||||||
T Consensus 538 ~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQr 617 (709)
T COG2274 538 NDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQR 617 (709)
T ss_pred HhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHH
Confidence 6999999999999999999999874 4577888888889999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHh
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
++||||++++|+|+||||||||||+++++.+.+. +....+|+|+|+||||++.+..||+|+||++|+|+++|+++|+++
T Consensus 618 lalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~-L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 618 LALARALLSKPKILLLDEATSALDPETEAIILQN-LLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred HHHHHHhccCCCEEEEeCcccccCHhHHHHHHHH-HHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999999999999998765 455667899999999999999999999999999999999999999
Q ss_pred cCcchHHHHH
Q 039402 831 SGTDFMELVG 840 (1496)
Q Consensus 831 ~~~~~~~~~~ 840 (1496)
.++.|.+++.
T Consensus 697 ~~g~y~~l~~ 706 (709)
T COG2274 697 QGGLYARLYQ 706 (709)
T ss_pred hcChHHHHHh
Confidence 9888887764
No 37
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.1e-67 Score=686.64 Aligned_cols=544 Identities=22% Similarity=0.256 Sum_probs=449.5
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 289 VKLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQ 368 (1496)
Q Consensus 289 ~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 368 (1496)
..+++..++.+++.++...++.++..++.++.|++++.++|.+..... ....+.++++++++.++..++.....+...+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (686)
T TIGR03797 124 RDLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD-RSLLVQIALALLAAAVGAAAFQLAQSLAVLR 202 (686)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666677788889999999999999999999999999998754322 2223444555666666777888888888899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 039402 369 LGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWY-IHDPWLVLFEVALSILILYKNLGIASLAA 447 (1496)
Q Consensus 369 ~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~~~lL~~~lg~~~l~~ 447 (1496)
++.++...++..+|+|.++++....++.++|+++++++ |++.+.+++.. +.......+.+++++++++..-++.+++.
T Consensus 203 ~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 281 (686)
T TIGR03797 203 LETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVA 281 (686)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997 89999886543 22222222233444555555555555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 448 LFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAIS 527 (1496)
Q Consensus 448 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~ 527 (1496)
++++++..++...+.+...+..++.++..+++.+...|.++|+++||.++.|+.+.+++++..++..+...+........
T Consensus 282 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (686)
T TIGR03797 282 VALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLL 361 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666677778888888999999999999999999999999999999999998888776655555444444443333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 039402 528 SFVFWGAP--TFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDL 605 (1496)
Q Consensus 528 ~~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~ 605 (1496)
..+..... ..+.++.++++.+.++.+|.|.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 362 ~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 441 (686)
T TIGR03797 362 TVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 33222222 2233455677777889999999999999999999999999999999999999999999999765432211
Q ss_pred ccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---
Q 039402 606 VEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--- 682 (1496)
Q Consensus 606 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--- 682 (1496)
. .........++++|++|+|+.+ ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 442 ~--~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~ 518 (686)
T TIGR03797 442 K--TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLA 518 (686)
T ss_pred c--CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcC
Confidence 1 1111123469999999999643 468999999999999999999999999999999999999999999999984
Q ss_pred ----------eEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 ----------KAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 ----------~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
++||||+|++|++||+|||.+|.+.+++++.++++.++++++++.+|+|++|.+||+|.+|||||||||+
T Consensus 519 ~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRia 598 (686)
T TIGR03797 519 GLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLL 598 (686)
T ss_pred cCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 5999999999999999999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
||||++++|+|+|||||||+||+++++++.+.+ +.. ++|+|+|||+++.++.||+|++|++|+|++.|+++|+++.+
T Consensus 599 lARAll~~p~iLiLDEpTS~LD~~te~~i~~~L-~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~ 675 (686)
T TIGR03797 599 IARALVRKPRILLFDEATSALDNRTQAIVSESL-ERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMARE 675 (686)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999997654 333 68999999999999999999999999999999999999888
Q ss_pred cchHHHHH
Q 039402 833 TDFMELVG 840 (1496)
Q Consensus 833 ~~~~~~~~ 840 (1496)
+.|.++..
T Consensus 676 ~~y~~l~~ 683 (686)
T TIGR03797 676 GLFAQLAR 683 (686)
T ss_pred cHHHHHHH
Confidence 88887764
No 38
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.9e-68 Score=691.50 Aligned_cols=544 Identities=19% Similarity=0.234 Sum_probs=455.1
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 290 KLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQL 369 (1496)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 369 (1496)
+.++..++.+++.++...+..++..++.++.|++++.++|.+..... ....+.++++++++.++..++.....+...++
T Consensus 143 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (710)
T TIGR03796 143 RALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR-QDWLRPLLLGMGLTALLQGVLTWLQLYYLRRL 221 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667778888888889999999999999999999997754332 22234445555666677778888888889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 039402 370 GIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAAL 448 (1496)
Q Consensus 370 ~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l 448 (1496)
+.++...++..+|+|.++++....++.++|+++|+++.| +.+.+++. .+.......+.+++.+++++..-++.+++.+
T Consensus 222 ~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 300 (710)
T TIGR03796 222 QIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGI 300 (710)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 67888653 3444455555555566666655566666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 449 FGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISS 528 (1496)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~ 528 (1496)
+.+++.+.+...+.+...+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++.+.+.++.+...+.........
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (710)
T TIGR03796 301 AFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILG 380 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667777788888888889999999999999999999999999999999999999888777776665555444433
Q ss_pred HHHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccc
Q 039402 529 FVFWGAP--TFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLV 606 (1496)
Q Consensus 529 ~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~ 606 (1496)
.+..... ..+.++.++++.+.++.+|.|.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 381 ~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 460 (710)
T TIGR03796 381 VLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEE 460 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 3222222 23345667888888999999999999999999999999999999999999999999999997754332211
Q ss_pred ----c-CCCC-CCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEc
Q 039402 607 ----E-KQPS-GSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLC 680 (1496)
Q Consensus 607 ----~-~~~~-~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~ 680 (1496)
. .... ......++++|++|+|+.. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++
T Consensus 461 ~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 539 (710)
T TIGR03796 461 EEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFD 539 (710)
T ss_pred ccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 0 0001 1123469999999999743 4689999999999999999999999999999999999999999999999
Q ss_pred Ce-------------eEEEccCCccCCCcHHHHhccCC-CCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChH
Q 039402 681 GT-------------KAYVAQSPWIQSGKIEDNILFGK-EMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGG 746 (1496)
Q Consensus 681 g~-------------~~yv~Q~~~i~~~ti~eNI~~g~-~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 746 (1496)
|. ++||||+|++|++||+|||.++. +.+++++.++++.++++++++.+|.|++|.+||+|.+||||
T Consensus 540 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGG 619 (710)
T TIGR03796 540 GIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGG 619 (710)
T ss_pred CEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHH
Confidence 83 69999999999999999999886 47889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChH
Q 039402 747 QKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||||+||||++++|+|+||||||||||+++++++++.+.+ .++|+|+|||+++.+..||+|++|++|++++.|+++
T Consensus 620 QrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 620 QRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred HHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999876543 589999999999999999999999999999999999
Q ss_pred HHHhcCcchHHHH
Q 039402 827 DLINSGTDFMELV 839 (1496)
Q Consensus 827 ~l~~~~~~~~~~~ 839 (1496)
|+++.++.|.+++
T Consensus 697 ~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 697 ELWAVGGAYARLI 709 (710)
T ss_pred HHHHcCCcHHHHh
Confidence 9998888887764
No 39
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.5e-71 Score=622.20 Aligned_cols=488 Identities=23% Similarity=0.379 Sum_probs=413.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCch---hHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 039402 985 RSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSG---RIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMS 1061 (1496)
Q Consensus 985 ~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G---rIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~ 1061 (1496)
|..++...+..+-+.+--+.+.|+....+.|.-+..+| |.+.|=++-++. .+...+...+..++.+....+++.
T Consensus 2 r~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~---i~~~~l~~i~P~~~Ei~l~~vi~~ 78 (497)
T COG5265 2 RDRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIET---ILRWILFNILPTLVEISLVAVILW 78 (497)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHH---HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34456677778888888889999999999998877666 445555544444 444455555555555554444433
Q ss_pred -HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhH
Q 039402 1062 -QVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRP 1140 (1496)
Q Consensus 1062 -~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~ 1140 (1496)
...|++..+.+..+++|.++.-.-....-..+|.-..+-+...+.-.+++-.-+|++.|+.|+.+..++...++.+.++
T Consensus 79 ~~~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a 158 (497)
T COG5265 79 RVYGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKA 158 (497)
T ss_pred hhcccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHH
Confidence 4678888887777777766544434444445555555666667778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHH
Q 039402 1141 TFHIAAAMEWLGLRLDMLSSITFAFTLVF-LISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQ 1219 (1496)
Q Consensus 1141 ~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~ 1219 (1496)
....+.+..||++--..+.+......... ..-+..|.++.|...+.-.|..+++.+++.+-..+.++.+.....|+..+
T Consensus 159 ~~k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfd 238 (497)
T COG5265 159 AIKVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFD 238 (497)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHH
Confidence 98888888888876655544433322222 22335788899999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCccCCCCCCCCC-CcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC
Q 039402 1220 YTCIPSEPPLAIEESRPNDSWP-SHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE 1298 (1496)
Q Consensus 1220 ~~~~~~E~~~~~~~~~~~~~wp-~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e 1298 (1496)
..+.+.|-. +....|+-|| ..|.|.|+||+|.|.|..| +|+|+||++++|+++||||++|+||||+.++|+|+|+
T Consensus 239 Ll~~~~~v~---d~pda~~L~~~~~g~v~F~~V~F~y~~~r~-iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD 314 (497)
T COG5265 239 LLDVEAEVS---DAPDAPPLWPVRLGAVAFINVSFAYDPRRP-ILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYD 314 (497)
T ss_pred hhccchhhc---cCCCCccccccccceEEEEEEEeeccccch-hhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhC
Confidence 988776543 3334556675 4688999999999998764 9999999999999999999999999999999999999
Q ss_pred CCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccc
Q 039402 1299 PAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVT 1377 (1496)
Q Consensus 1299 p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~ 1377 (1496)
+++|.|.|||.||..+..+.||+.||+||||.+||++|+..|+... +..+++|++.|++.++++++|+++|+|+||.||
T Consensus 315 ~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vg 394 (497)
T COG5265 315 VNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVG 394 (497)
T ss_pred CcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccc
Confidence 9999999999999999999999999999999999999999999865 478999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCe
Q 039402 1378 ENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGL 1457 (1496)
Q Consensus 1378 e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ 1457 (1496)
|.|-.||||||||+++||++||+|+||+||||||+||..||+.||.+|++..+++|.++|||||+||.|+|.|+||++|+
T Consensus 395 erglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~ 474 (497)
T COG5265 395 ERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGR 474 (497)
T ss_pred hheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeEecChhhHhhcCCcHHHHHHH
Q 039402 1458 IEEFDNPANLLENKSSSFSQLVA 1480 (1496)
Q Consensus 1458 IvE~g~p~~Ll~~~~s~F~~l~~ 1480 (1496)
|+|.|+|++|+++ +|.|++|+.
T Consensus 475 i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 475 IVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred EEecCcHHHHHHc-CChHHHHhc
Confidence 9999999999976 899999974
No 40
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.6e-68 Score=671.66 Aligned_cols=528 Identities=18% Similarity=0.163 Sum_probs=423.2
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039402 930 ILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIF 1009 (1496)
Q Consensus 930 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll 1009 (1496)
.+++.++..++.++.++.+....+.............++.+++++.++..++.+++.++....+.+....++.+++++++
T Consensus 11 ~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 90 (544)
T TIGR01842 11 VGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASF 90 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444555666677777776554321101111112234445555666677888889999999999999999999999999
Q ss_pred cCccccccccCchhHHHHHhhhHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1010 RAPMSFFDATPSGRIINRASTDQSAADLGIPS-LVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISS 1088 (1496)
Q Consensus 1010 ~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~ 1088 (1496)
+.|+.. .|...+++++|++.+...+.. .+..++..++.++ .+++++..+|++.++++..+++.+.+..++.+.
T Consensus 91 ~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~ 164 (544)
T TIGR01842 91 SATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLALLNNRA 164 (544)
T ss_pred cCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999843 366789999999999887766 3444444444443 345677888887766554444444444444444
Q ss_pred HHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 039402 1089 ARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTL- 1167 (1496)
Q Consensus 1089 ~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~- 1167 (1496)
.+...+......+...+++.|+++|+.+||+|+.++.+.+++.+..++..+.................++..+...+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (544)
T TIGR01842 165 TKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLG 244 (544)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555667778889999999999999999999999999998888887766655444443333333333332222222
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEE
Q 039402 1168 VFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKID 1247 (1496)
Q Consensus 1168 ~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1247 (1496)
+.......|.+++|.+..++.|...+...+..+...+.+++....+.+|+.++.+.++|.+.. ...+ +..+.|+
T Consensus 245 ~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~---~~~~~i~ 318 (544)
T TIGR01842 245 LGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA---MPLP---EPEGHLS 318 (544)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC---CCCC---CCCCeEE
Confidence 122334578899999999999999999999999999999999999999999999876654211 1111 2356899
Q ss_pred EEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEc
Q 039402 1248 LLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIP 1327 (1496)
Q Consensus 1248 f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1327 (1496)
++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|++++++|
T Consensus 319 ~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~ 398 (544)
T TIGR01842 319 VENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLP 398 (544)
T ss_pred EEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEec
Confidence 99999999765567999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhccCCCC-CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEE
Q 039402 1328 QDPVMFEGTVRSNLDPLE-ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILML 1406 (1496)
Q Consensus 1328 Qdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiL 1406 (1496)
|||.+|+||+|+|+..++ +++|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||++++|+||||
T Consensus 399 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ilil 478 (544)
T TIGR01842 399 QDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVL 478 (544)
T ss_pred CCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999998654 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhh
Q 039402 1407 DEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1407 DEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||||+||++|++.|.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 479 DEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 479 DEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred eCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999875 6799999999999999999999999999999999999985
No 41
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2e-67 Score=683.58 Aligned_cols=540 Identities=21% Similarity=0.242 Sum_probs=431.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 294 AMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRM 373 (1496)
Q Consensus 294 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~i 373 (1496)
.+++.+|+.++...++.++..++..+.|++++.++|.+........ ....+..+++..++..++.....+.....+.++
T Consensus 154 ~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 232 (711)
T TIGR00958 154 GLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPA-LASAIFFMCLLSIASSVSAGLRGGSFNYTMARI 232 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667778888889999999999999999999998864332111 111122223333344444444444555667777
Q ss_pred HHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 039402 374 RAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAALFGTV 452 (1496)
Q Consensus 374 r~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~ 452 (1496)
...++..+|+|.++.+....++.++|+++|++++|++.+.+++. .+..++...+.+++++++++..-+..+++.++.++
T Consensus 233 ~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~ 312 (711)
T TIGR00958 233 NLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLP 312 (711)
T ss_pred HHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 77788888999999999999999999999999999999998653 45556666666666666665544444455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 453 IVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFW 532 (1496)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~ 532 (1496)
+...+...+.+..++..++.++..++..+...|.++|+++||.|++|+.+.+++.+..++..+..++.............
T Consensus 313 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (711)
T TIGR00958 313 LVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTS 392 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566677778888888888899999999999999999999999999998887766554433333322222222211111
Q ss_pred H--HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCC
Q 039402 533 G--APTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQP 610 (1496)
Q Consensus 533 ~--~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~ 610 (1496)
. ....+.++.++.+.+..+.++.|.+++++.++..+..|+..++..+..+.+++++.+|+.++++.++..+......+
T Consensus 393 ~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~ 472 (711)
T TIGR00958 393 VLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAP 472 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCC
Confidence 1 11233445667788888999999999999999999999999999999999999999999999976544322111111
Q ss_pred CCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------
Q 039402 611 SGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------- 682 (1496)
Q Consensus 611 ~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------- 682 (1496)
......++++|++|+|+..+++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.
T Consensus 473 -~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~ 551 (711)
T TIGR00958 473 -LNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHH 551 (711)
T ss_pred -CCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHH
Confidence 11234699999999997544568999999999999999999999999999999999999999999999983
Q ss_pred -----eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHH
Q 039402 683 -----KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 756 (1496)
Q Consensus 683 -----~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 756 (1496)
++||+|+|++|++||||||.+|.+ .+++++.++++.++++++++.+|+|++|.+||+|.+||||||||++||||
T Consensus 552 ~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARA 631 (711)
T TIGR00958 552 YLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARA 631 (711)
T ss_pred HHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHH
Confidence 699999999999999999999965 67889999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchH
Q 039402 757 LYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFM 836 (1496)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~ 836 (1496)
++++|+|+|||||||+||+++++.+.+ ....+++|+|+|||+++.+..||+|++|++|+|++.|+|+|++++++.|.
T Consensus 632 Ll~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~ 708 (711)
T TIGR00958 632 LVRKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGCYK 708 (711)
T ss_pred HhcCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchH
Confidence 999999999999999999999988876 22347899999999999999999999999999999999999998877776
Q ss_pred HH
Q 039402 837 EL 838 (1496)
Q Consensus 837 ~~ 838 (1496)
++
T Consensus 709 ~l 710 (711)
T TIGR00958 709 HL 710 (711)
T ss_pred hc
Confidence 54
No 42
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.9e-67 Score=682.19 Aligned_cols=538 Identities=22% Similarity=0.306 Sum_probs=446.3
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 289 VKLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQ 368 (1496)
Q Consensus 289 ~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 368 (1496)
.+.++..++.+++.+....++.++..++.++.|++++.++|.+..... ....+.+++++++..++..++.....+...+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 135 KHWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA-FETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344666678889989989999999999999999999999998754332 1223334445555566677777777888889
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 039402 369 LGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWY-IHDPWLVLFEVALSILILYKNLGIASLAA 447 (1496)
Q Consensus 369 ~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~~~lL~~~lg~~~l~~ 447 (1496)
++.++...++..+|+|.++++... .+.++|++++++ +|++.+.+++.. +.......+.+++.+++++..-++.+++.
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 291 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVP 291 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999887 678999999999 799999987543 22233322233344444444455556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 448 LFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAIS 527 (1496)
Q Consensus 448 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~ 527 (1496)
++++++.+++..++.+...+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++.+..++..+...+........
T Consensus 292 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (694)
T TIGR03375 292 LVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLA 371 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777777788888899999999999999999999999999999999999999999888877776666655554444
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 039402 528 SFVFWGAP--TFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDL 605 (1496)
Q Consensus 528 ~~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~ 605 (1496)
..+..... ..+.++++|++.+.++.+|.|.+++++.++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 372 ~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~ 451 (694)
T TIGR03375 372 TNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEG 451 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 33322222 2233456788888899999999999999999999999999999999999999999999999876533221
Q ss_pred ccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC----
Q 039402 606 VEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---- 681 (1496)
Q Consensus 606 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g---- 681 (1496)
....+.......|+++|++|+|+. .++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 452 ~~~~~~~~~~~~I~~~~vsf~Y~~-~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~ 530 (694)
T TIGR03375 452 TRFLHRPRLQGEIEFRNVSFAYPG-QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIR 530 (694)
T ss_pred CCCCCCCCccceEEEEEEEEEeCC-CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhh
Confidence 111111112346999999999963 346799999999999999999999999999999999999999999999998
Q ss_pred ---------eeEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 682 ---------TKAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 682 ---------~~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
.++||||+|++|++||+|||.++.+ .+++++.++++.++++++++.+|+|++|.+||+|.+||||||||+
T Consensus 531 ~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRl 610 (694)
T TIGR03375 531 QIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAV 610 (694)
T ss_pred hCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHH
Confidence 3699999999999999999999986 789999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhc
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
+||||++++|+|+|||||||+||+++++.+.+ .+....+++|+|+||||++.++.||+|++|++|++++.|+++|+++.
T Consensus 611 alARall~~p~iliLDE~Ts~LD~~te~~i~~-~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 611 ALARALLRDPPILLLDEPTSAMDNRSEERFKD-RLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999875 45666679999999999999999999999999999999999998754
No 43
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6e-68 Score=722.59 Aligned_cols=514 Identities=17% Similarity=0.221 Sum_probs=426.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHH
Q 039402 966 TLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGA 1045 (1496)
Q Consensus 966 ~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~ 1045 (1496)
.+...+++++++..++.+++.++....+.+...+++.++++++++.|++|||..+.|++.+|++.|+..+...+...+..
T Consensus 98 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~ 177 (1466)
T PTZ00265 98 DIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFIT 177 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556677778888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHH
Q 039402 1046 YAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESR 1125 (1496)
Q Consensus 1046 ~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~ 1125 (1496)
++..++.+++.++++++.+|.+.++++.++++++++..++.+..+...+......+...+.+.|++.|+.|||+|+.|++
T Consensus 178 ~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~ 257 (1466)
T PTZ00265 178 IFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKT 257 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHH
Confidence 99999999999999999999999887776666666666666666666666667777889999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC--------CCCCHHHHHHHHHHHHHHHHH
Q 039402 1126 FRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFL-ISIPK--------GFIDPAIAGLAVTYGLTLNTL 1196 (1496)
Q Consensus 1126 f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~-~~~~~--------g~~~~g~~gl~l~y~l~l~~~ 1196 (1496)
+.+++.+..+.+.+..........+......++..+..++..++. ..... +.+++|.+...+.+.+.....
T Consensus 258 ~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~ 337 (1466)
T PTZ00265 258 ILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFM 337 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHH
Confidence 999999888877776655544443332233333222222222221 11122 235555444443333333333
Q ss_pred HHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCC-CccceeeeEEeeCCcE
Q 039402 1197 LATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQM-PLVLQGISCTFPGGEK 1275 (1496)
Q Consensus 1197 l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vLk~iS~~I~~Gek 1275 (1496)
+..+...+..+.....|.+|+.+.++.+++.+.. ++ ....|..+.|+|+||+|+|+... .++|+|+||+|++||+
T Consensus 338 l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~-~~---~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~ 413 (1466)
T PTZ00265 338 LTIILPNITEYMKSLEATNSLYEIINRKPLVENN-DD---GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKT 413 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CC---CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCE
Confidence 4455667788899999999999999876653211 11 11123345899999999997532 3699999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhcccCCCccEEEE-CCeeCCCCChHHHhcccEEEcccccccccchhhccCCC----------
Q 039402 1276 TGIVGRTGSGKSTLIQTLFRIVEPAAGQILI-DGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL---------- 1344 (1496)
Q Consensus 1276 vgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I-DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---------- 1344 (1496)
+||||+||||||||+++|.|+|+|++|+|+| ||.|+++++.+++|++|++|||||.||++||++||...
T Consensus 414 vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~ 493 (1466)
T PTZ00265 414 YAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEAL 493 (1466)
T ss_pred EEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchh
Confidence 9999999999999999999999999999999 57999999999999999999999999999999999742
Q ss_pred ------------------------------------------------CCCcHHHHHHHHHHcCCcHHHHhccCCccccc
Q 039402 1345 ------------------------------------------------EESTDEQIWEALDKCQLGDEVRKKEGKLDSKV 1376 (1496)
Q Consensus 1345 ------------------------------------------------~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v 1376 (1496)
.+.+|+++++|++++++++++.++|+|+||.+
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~v 573 (1466)
T PTZ00265 494 SNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLV 573 (1466)
T ss_pred ccccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCcee
Confidence 13578999999999999999999999999999
Q ss_pred ccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcccCEEEEEe
Q 039402 1377 TENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVIDSDLVLLLN 1454 (1496)
Q Consensus 1377 ~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~~DrIlVL~ 1454 (1496)
+++|.+||||||||++|||||+++|+|||||||||+||+++++.|++.|++.. +++|+|+||||++++..||+|+||+
T Consensus 574 g~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~ 653 (1466)
T PTZ00265 574 GSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLS 653 (1466)
T ss_pred CCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999875 4799999999999999999999999
Q ss_pred CC-----------------------------------------------eEeEecChhhHhhcCCcHHHHHHHHHh
Q 039402 1455 HG-----------------------------------------------LIEEFDNPANLLENKSSSFSQLVAEYT 1483 (1496)
Q Consensus 1455 ~G-----------------------------------------------~IvE~g~p~~Ll~~~~s~F~~l~~~~~ 1483 (1496)
+| +|+|+|+|++|+++++|.|+.|++...
T Consensus 654 ~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~ 729 (1466)
T PTZ00265 654 NRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQK 729 (1466)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhc
Confidence 96 599999999999877899999996653
No 44
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.5e-69 Score=644.86 Aligned_cols=464 Identities=27% Similarity=0.400 Sum_probs=359.5
Q ss_pred cEEEEeeEEEecCCCC-CCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCC----ccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSH-NPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI----SGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~----~G~i~~~g~--------- 682 (1496)
.++++|++..|...+. .++++||||++.+||.+||+|+|||||||+.++|.|.+++. +|+|.++|+
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975533 25999999999999999999999999999999999999987 899999883
Q ss_pred --------eEEEccCCcc-CC--CcHHHHhc----cCCCCC-HHHHH---HHHHHhchhhHHHhccCCCcccccCCCCCC
Q 039402 683 --------KAYVAQSPWI-QS--GKIEDNIL----FGKEMN-RERYN---AVLDACSLKKDLEILSFGDQTVIGERGINL 743 (1496)
Q Consensus 683 --------~~yv~Q~~~i-~~--~ti~eNI~----~g~~~~-~~~~~---~v~~~~~l~~d~~~l~~g~~t~ig~~g~~L 743 (1496)
+||++|+|+- +| .||.+-|. .....+ ++..+ +.++..++. +.... +..+.+|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~-------~~~~~--~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLP-------DPERR--DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCC-------Chhhh--ccCCccc
Confidence 6999999862 33 35554443 333222 22222 233333332 22222 5678999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh--CCcEEEEEccCcCcccc-CCEEEEEeCCeEE
Q 039402 744 SGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL--SSKTVIYVTHQVEFLPA-ADLILVMKDGKIT 820 (1496)
Q Consensus 744 SGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 820 (1496)
||||||||.||+||..+|+++|+||||+|||+.++.+|.+. ++.+. .|.++|+||||++.+.+ ||+|+||++|+++
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~l-lk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iV 234 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDL-LKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIV 234 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHH-HHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEE
Confidence 99999999999999999999999999999999999999864 44443 48999999999999876 9999999999999
Q ss_pred EecChHHHHhcCcc-hHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchh
Q 039402 821 QAGKYNDLINSGTD-FMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLV 899 (1496)
Q Consensus 821 ~~G~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1496)
+.|+.++++++... |.+.+
T Consensus 235 E~G~~~~i~~~p~hpYT~~L------------------------------------------------------------ 254 (539)
T COG1123 235 ETGPTEEILSNPQHPYTRGL------------------------------------------------------------ 254 (539)
T ss_pred EecCHHHHHhccCCcccHHH------------------------------------------------------------
Confidence 99999998754210 00000
Q ss_pred HHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHH
Q 039402 900 QEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSS 979 (1496)
Q Consensus 900 ~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~ 979 (1496)
.+ ..|.....
T Consensus 255 -------------------l~-------------------------------------a~p~~~~~-------------- 264 (539)
T COG1123 255 -------------------LA-------------------------------------AVPRLGDE-------------- 264 (539)
T ss_pred -------------------Hh-------------------------------------hCCCcccc--------------
Confidence 00 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 039402 980 FCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAV 1059 (1496)
Q Consensus 980 ~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~ 1059 (1496)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhh
Q 039402 1060 MSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSR 1139 (1496)
Q Consensus 1060 ~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~ 1139 (1496)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHH
Q 039402 1140 PTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQ 1219 (1496)
Q Consensus 1140 ~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~ 1219 (1496)
..
T Consensus 265 -----------------------------------~~------------------------------------------- 266 (539)
T COG1123 265 -----------------------------------KI------------------------------------------- 266 (539)
T ss_pred -----------------------------------cc-------------------------------------------
Confidence 00
Q ss_pred hhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCC---------CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHH
Q 039402 1220 YTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAP---------QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLI 1290 (1496)
Q Consensus 1220 ~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~---------~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl 1290 (1496)
...+.+. +. +...-++++|++.+|.. ....+++||||++++||.+||||.||||||||.
T Consensus 267 -~~~~~~~--------~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTla 334 (539)
T COG1123 267 -IRLPRRG--------PL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLA 334 (539)
T ss_pred -ccccccc--------cc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHH
Confidence 0000000 00 01225889999999974 124689999999999999999999999999999
Q ss_pred HHHhcccCCCccEEEECCee--CCCCChHHHhcccEEEccccccc---ccchhhccC-CCCCC-------cHHHHHHHHH
Q 039402 1291 QTLFRIVEPAAGQILIDGID--ISLIGLHDLRSRLSIIPQDPVMF---EGTVRSNLD-PLEES-------TDEQIWEALD 1357 (1496)
Q Consensus 1291 ~~L~rl~ep~~G~I~IDG~d--I~~i~l~~LR~~i~iIpQdp~LF---~gTIR~NLd-p~~~~-------sd~eI~~aL~ 1357 (1496)
++|+|+++|++|+|.++|.| .+.-....+|+++-+|.|||+-. ..||+++|. |...+ ..+.+-+.|+
T Consensus 335 r~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~ 414 (539)
T COG1123 335 RILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLE 414 (539)
T ss_pred HHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHH
Confidence 99999999999999999977 33333566888999999999732 459999995 44311 2234777899
Q ss_pred HcCCcH-HHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEE
Q 039402 1358 KCQLGD-EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTV 1434 (1496)
Q Consensus 1358 ~~~L~~-~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TV 1434 (1496)
+++|.+ +..+.| ..||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|.+.-+ +.|.
T Consensus 415 ~VgL~~~~l~ryP-----------~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~ 483 (539)
T COG1123 415 LVGLPPEFLDRYP-----------HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTY 483 (539)
T ss_pred HcCCCHHHHhcCc-----------hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEE
Confidence 999986 344444 46799999999999999999999999999999999999999999887543 6899
Q ss_pred EEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHH
Q 039402 1435 LTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAE 1481 (1496)
Q Consensus 1435 I~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~ 1481 (1496)
|+|+|++..+.. ||||.||++|+|||.|+.+++.+++...|.+...+
T Consensus 484 lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 484 LFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred EEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 999999999998 99999999999999999999999988777765544
No 45
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.4e-66 Score=673.78 Aligned_cols=543 Identities=22% Similarity=0.315 Sum_probs=440.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 291 LIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLG 370 (1496)
Q Consensus 291 l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~ 370 (1496)
.++..++.+++.++...++.++..++.++.|++++.++|.+..... ....+.+++++++..++..++.....+...+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (708)
T TIGR01193 146 KFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM-MGTLGIISIGLIIAYIIQQILSYIQIFLLNVLG 224 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566778888888888999999999999999999997754332 222233444455556667777777778888999
Q ss_pred HHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 039402 371 IRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWY-IHDPWLVLFEVALSILILYKNLGIASLAALF 449 (1496)
Q Consensus 371 ~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~ 449 (1496)
.++...++..+|+|.++++....++.++|+++++++ |++.+.+++.. +.......+.+++.+++++..-++.+++.++
T Consensus 225 ~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~ 303 (708)
T TIGR01193 225 QRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLL 303 (708)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999999999999999999999998 99999987543 2222222233333444444444444455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 450 GTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSF 529 (1496)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~ 529 (1496)
++++...+...+.+..++..++.++..+++.+...|.++|+++||.+++|+.+.+++.+..++..+...+..........
T Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (708)
T TIGR01193 304 SIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQA 383 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666677788888999999999999999999999999999999999999888877655544443333332222222
Q ss_pred HHHHH--HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccc
Q 039402 530 VFWGA--PTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVE 607 (1496)
Q Consensus 530 ~~~~~--p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~ 607 (1496)
+.... ...+.++++|++.+..+.+|.|.++++..++..+..|+..+...+..+.+++++++|+.++++.++..+....
T Consensus 384 ~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~ 463 (708)
T TIGR01193 384 IKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKK 463 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccc
Confidence 11111 1234456778888889999999999999999999999999999999999999999999999976543322111
Q ss_pred CCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----
Q 039402 608 KQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----- 682 (1496)
Q Consensus 608 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~----- 682 (1496)
..+.......|+++|++|+|+ +++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.
T Consensus 464 ~~~~~~~~~~I~~~~vsf~y~--~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~ 541 (708)
T TIGR01193 464 RTELNNLNGDIVINDVSYSYG--YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDI 541 (708)
T ss_pred ccCCCCCCCcEEEEEEEEEcC--CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHc
Confidence 011112234699999999996 2468999999999999999999999999999999999999999999999984
Q ss_pred --------eEEEccCCccCCCcHHHHhccCC--CCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 --------KAYVAQSPWIQSGKIEDNILFGK--EMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 --------~~yv~Q~~~i~~~ti~eNI~~g~--~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
++||||+|++|++||+|||.+|. ..+++++.++++.++++++++.+|.|++|.+||+|.+|||||||||+
T Consensus 542 ~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRia 621 (708)
T TIGR01193 542 DRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIA 621 (708)
T ss_pred CHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHH
Confidence 69999999999999999999983 47788999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
||||++++|+|+|||||||+||+++++++.+.+. . .+++|+|+|||+++.+..||+|++|++|++++.|+++|+++.+
T Consensus 622 lARall~~p~iliLDE~Ts~LD~~te~~i~~~L~-~-~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~~ 699 (708)
T TIGR01193 622 LARALLTDSKVLILDESTSNLDTITEKKIVNNLL-N-LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDRN 699 (708)
T ss_pred HHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHH-H-hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhcC
Confidence 9999999999999999999999999999876654 3 3789999999999999999999999999999999999999888
Q ss_pred cchHHHH
Q 039402 833 TDFMELV 839 (1496)
Q Consensus 833 ~~~~~~~ 839 (1496)
+.|.+++
T Consensus 700 ~~y~~l~ 706 (708)
T TIGR01193 700 GFYASLI 706 (708)
T ss_pred CcHHHHh
Confidence 8787764
No 46
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.4e-65 Score=654.27 Aligned_cols=545 Identities=19% Similarity=0.231 Sum_probs=441.0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 292 IKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGI 371 (1496)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~ 371 (1496)
++.+++.+++.++...++.++..++..+.|++++.+++.+..... ......++.++++..++..++.....+...+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 94 (582)
T PRK11176 16 LWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD-RSVLKWMPLVVIGLMILRGITSFISSYCISWVSG 94 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777778877788888888888999999999987754321 1112222333334455566666666667788889
Q ss_pred HHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 039402 372 RMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAALFG 450 (1496)
Q Consensus 372 ~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~ 450 (1496)
++...++..+|+|.++++.....+.+.|++++++++|++++.+++. .+..++..++.+++.+++++..-++.+++.+++
T Consensus 95 ~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~ 174 (582)
T PRK11176 95 KVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVI 174 (582)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998643 445556666666666666655545545555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 451 TVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFV 530 (1496)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 530 (1496)
+++..++...+.+..++..++.++..++......|.++|+++||.+++|+.+.+++++.-++-.+...+..........+
T Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (582)
T PRK11176 175 APIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPI 254 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555566677788888888899999999999999999999999999999988888766554444443333333322222
Q ss_pred HHHH--HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccC
Q 039402 531 FWGA--PTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEK 608 (1496)
Q Consensus 531 ~~~~--p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~ 608 (1496)
.... -..+.++.++.+.+..+.+++|.+.++..++..+..|+..+...+..+.+++.+++|+.++++.++..+.....
T Consensus 255 ~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~ 334 (582)
T PRK11176 255 IQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKRV 334 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCcC
Confidence 1111 12334455677777788999999999999999999999999999999999999999999999765442211111
Q ss_pred CCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------
Q 039402 609 QPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------ 682 (1496)
Q Consensus 609 ~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------ 682 (1496)
.......++++|++|+|+. .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 335 --~~~~~~~i~~~~vsf~y~~-~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~ 411 (582)
T PRK11176 335 --IERAKGDIEFRNVTFTYPG-KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYT 411 (582)
T ss_pred --CCCCCCeEEEEEEEEecCC-CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcC
Confidence 1112236999999999963 2468999999999999999999999999999999999999999999999984
Q ss_pred -------eEEEccCCccCCCcHHHHhccCCC--CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 -------KAYVAQSPWIQSGKIEDNILFGKE--MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 -------~~yv~Q~~~i~~~ti~eNI~~g~~--~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++||||+|.+|++||+|||.+|.+ .++++++++++.++++++++.+|+|++|.+|++|.+||||||||++|
T Consensus 412 ~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~L 491 (582)
T PRK11176 412 LASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAI 491 (582)
T ss_pred HHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHH
Confidence 499999999999999999999863 78999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCc
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGT 833 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~ 833 (1496)
|||++++|+|+||||||||||+++++.+++. +....+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++
T Consensus 492 ARall~~~~ililDEptsaLD~~t~~~i~~~-l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~ 570 (582)
T PRK11176 492 ARALLRDSPILILDEATSALDTESERAIQAA-LDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQNG 570 (582)
T ss_pred HHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCCC
Confidence 9999999999999999999999999998754 455567899999999999999999999999999999999999999888
Q ss_pred chHHHHHH
Q 039402 834 DFMELVGA 841 (1496)
Q Consensus 834 ~~~~~~~~ 841 (1496)
.|+++...
T Consensus 571 ~y~~l~~~ 578 (582)
T PRK11176 571 VYAQLHKM 578 (582)
T ss_pred hHHHHHHH
Confidence 88887653
No 47
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.9e-65 Score=650.61 Aligned_cols=544 Identities=21% Similarity=0.257 Sum_probs=450.6
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 292 IKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGI 371 (1496)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~ 371 (1496)
++.+++.+++.+++..++.++..++....|++++.+++....... ....+.+++++++..++..++.....+...+.+.
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD-RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSN 83 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677788889999999999999999999999999886543321 1222333434555556667777777778889999
Q ss_pred HHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 039402 372 RMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAALFG 450 (1496)
Q Consensus 372 ~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~ 450 (1496)
++...++..+|+|.++.+.....+.+.|+++|+++.|++++.+++. .+..++...+.+++++++++..-++.+++.+++
T Consensus 84 ~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~ 163 (571)
T TIGR02203 84 KVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVM 163 (571)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998754 455556556666666666655555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 451 TVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFV 530 (1496)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 530 (1496)
+++.+.+...+.+..++..++..+..+++.+.++|.++|+++||.++.|+.+.+++.+..++..+...+..........+
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (571)
T TIGR02203 164 LPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPI 243 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666677778888889999999999999999999999999999999999998888877666555554444433333333
Q ss_pred HHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccC
Q 039402 531 FWGAP--TFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEK 608 (1496)
Q Consensus 531 ~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~ 608 (1496)
..... ..+.++.++.+.+..+.+|+|.++++..++..+..|+..+...+..+.+++++.+|+.++++.++..+....
T Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~- 322 (571)
T TIGR02203 244 TQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR- 322 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-
Confidence 22222 223445667777888999999999999999999999999999999999999999999999976554322111
Q ss_pred CCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------
Q 039402 609 QPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------ 682 (1496)
Q Consensus 609 ~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------ 682 (1496)
+.......++++|++|+|+.. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 323 -~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~ 400 (571)
T TIGR02203 323 -AIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYT 400 (571)
T ss_pred -CCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcC
Confidence 111123469999999999743 468999999999999999999999999999999999999999999999983
Q ss_pred -------eEEEccCCccCCCcHHHHhccCC--CCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 -------KAYVAQSPWIQSGKIEDNILFGK--EMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 -------~~yv~Q~~~i~~~ti~eNI~~g~--~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++||||+|++|++|++|||.++. +.+++++.++++.|++++++..+|+|.+|.+|++|.+||||||||++|
T Consensus 401 ~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaL 480 (571)
T TIGR02203 401 LASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAI 480 (571)
T ss_pred HHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHH
Confidence 69999999999999999999996 488999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCc
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGT 833 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~ 833 (1496)
|||++++|+|+|||||||+||+++++++.+. +....+++|+|+|||+.+.+..||+|++|++|++++.|+++++++.+.
T Consensus 481 ARall~~~~illLDEpts~LD~~~~~~i~~~-L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~ 559 (571)
T TIGR02203 481 ARALLKDAPILILDEATSALDNESERLVQAA-LERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNG 559 (571)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCC
Confidence 9999999999999999999999999999654 455567899999999999999999999999999999999999998777
Q ss_pred chHHHHH
Q 039402 834 DFMELVG 840 (1496)
Q Consensus 834 ~~~~~~~ 840 (1496)
.|.++..
T Consensus 560 ~~~~~~~ 566 (571)
T TIGR02203 560 LYAQLHN 566 (571)
T ss_pred HHHHHHH
Confidence 7776543
No 48
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-67 Score=673.43 Aligned_cols=485 Identities=25% Similarity=0.364 Sum_probs=358.4
Q ss_pred ccEEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC-------------
Q 039402 616 TALDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 681 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g------------- 681 (1496)
..++++|++++|.... ..++|+||||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 3689999999996322 34799999999999999999999999999999999999999999998765
Q ss_pred --------------eeEEEccCC--ccC-CCcHHHHhccCCC----CCHH----HHHHHHHHhchhhHHHhccCCCcccc
Q 039402 682 --------------TKAYVAQSP--WIQ-SGKIEDNILFGKE----MNRE----RYNAVLDACSLKKDLEILSFGDQTVI 736 (1496)
Q Consensus 682 --------------~~~yv~Q~~--~i~-~~ti~eNI~~g~~----~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~i 736 (1496)
.++||+|+| .++ ..||+|||.++.. .+.. +..++++..++.+ .....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~--------~~~~~ 162 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPE--------AQTIL 162 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCC--------hhhHH
Confidence 379999998 354 4699999987531 2221 2223333333310 01234
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-C-CcEEEEEccCcCcccc-CCEEEE
Q 039402 737 GERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-S-SKTVIYVTHQVEFLPA-ADLILV 813 (1496)
Q Consensus 737 g~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~i~~ 813 (1496)
.+...+|||||||||+|||||+.+|++|||||||++||+.+...+.+ +++.+. + |+|+|+|||+++.+.. ||+|++
T Consensus 163 ~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~-ll~~l~~~~g~tvi~itHdl~~~~~~adri~v 241 (623)
T PRK10261 163 SRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQ-LIKVLQKEMSMGVIFITHDMGVVAEIADRVLV 241 (623)
T ss_pred hCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEE
Confidence 57788999999999999999999999999999999999999888875 454443 3 8999999999999865 999999
Q ss_pred EeCCeEEEecChHHHHhcCc-chHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhh
Q 039402 814 MKDGKITQAGKYNDLINSGT-DFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVA 892 (1496)
Q Consensus 814 l~~G~i~~~G~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (1496)
|++|++++.|+++++..... .|.+ .... . .... ..
T Consensus 242 l~~G~i~~~g~~~~~~~~~~~~~~~-------~l~~--~-----------------------------~~~~--~~---- 277 (623)
T PRK10261 242 MYQGEAVETGSVEQIFHAPQHPYTR-------ALLA--A-----------------------------VPQL--GA---- 277 (623)
T ss_pred eeCCeecccCCHHHhhcCCCChhhh-------hhhh--c-----------------------------cCcc--cc----
Confidence 99999999999877643210 0000 0000 0 0000 00
Q ss_pred hhccchhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHH
Q 039402 893 VSKGQLVQEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYV 972 (1496)
Q Consensus 893 ~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~ 972 (1496)
..|. ..
T Consensus 278 ------------~~~~-------------------------------------------------~~------------- 283 (623)
T PRK10261 278 ------------MKGL-------------------------------------------------DY------------- 283 (623)
T ss_pred ------------cccc-------------------------------------------------cC-------------
Confidence 0000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHH
Q 039402 973 ALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIR 1052 (1496)
Q Consensus 973 ~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~ 1052 (1496)
| ++ .+.
T Consensus 284 ---------------------------------------~---------~~---------------~~~----------- 289 (623)
T PRK10261 284 ---------------------------------------P---------RR---------------FPL----------- 289 (623)
T ss_pred ---------------------------------------C---------cc---------------ccc-----------
Confidence 0 00 000
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHH
Q 039402 1053 ILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMK 1132 (1496)
Q Consensus 1053 ~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~ 1132 (1496)
.+
T Consensus 290 ------------------------------------------------~~------------------------------ 291 (623)
T PRK10261 290 ------------------------------------------------IS------------------------------ 291 (623)
T ss_pred ------------------------------------------------cc------------------------------
Confidence 00
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 039402 1133 LMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKII 1212 (1496)
Q Consensus 1133 ~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~ 1212 (1496)
. .. ...
T Consensus 292 ---~-~~----------------------------------~~~------------------------------------ 297 (623)
T PRK10261 292 ---L-EH----------------------------------PAK------------------------------------ 297 (623)
T ss_pred ---c-cc----------------------------------ccc------------------------------------
Confidence 0 00 000
Q ss_pred HHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCC---------CCccceeeeEEeeCCcEEEEEcCCC
Q 039402 1213 SVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQ---------MPLVLQGISCTFPGGEKTGIVGRTG 1283 (1496)
Q Consensus 1213 sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vLk~iS~~I~~GekvgIVGrTG 1283 (1496)
..+.+.+ . ..+ +...-++++||+++|... ...+|+||||+|++||++||+|+||
T Consensus 298 ---------~~~~~~~----~-~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nG 360 (623)
T PRK10261 298 ---------QEPPIEQ----D-TVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESG 360 (623)
T ss_pred ---------cCccccc----c-ccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCC
Confidence 0000000 0 000 011259999999999621 1359999999999999999999999
Q ss_pred CCHHHHHHHHhcccCCCccEEEECCeeCCCCChH---HHhcccEEEcccc--ccccc-chhhccCC-C---CCC----cH
Q 039402 1284 SGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLRSRLSIIPQDP--VMFEG-TVRSNLDP-L---EES----TD 1349 (1496)
Q Consensus 1284 SGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~~i~iIpQdp--~LF~g-TIR~NLdp-~---~~~----sd 1349 (1496)
||||||+++|.|+.+|++|+|.+||.++...+.. .+|++|++|||+| .++.. |+++|+.. . +.. .+
T Consensus 361 sGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~ 440 (623)
T PRK10261 361 SGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAA 440 (623)
T ss_pred CCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 9999999999999999999999999999877643 4678899999998 36654 99999852 1 111 12
Q ss_pred HHHHHHHHHcCCc-HHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHh
Q 039402 1350 EQIWEALDKCQLG-DEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQH 1428 (1496)
Q Consensus 1350 ~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~ 1428 (1496)
+++.+.|+.+++. +.....| ..||||||||++|||||+.+|+||||||||++||..+.+.|.+.|++.
T Consensus 441 ~~~~~~L~~~gL~~~~~~~~~-----------~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l 509 (623)
T PRK10261 441 ARVAWLLERVGLLPEHAWRYP-----------HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDL 509 (623)
T ss_pred HHHHHHHHHcCCCHHHhhCCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH
Confidence 4577888888885 3333333 468999999999999999999999999999999999999999999886
Q ss_pred cC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHHH-HHHHH
Q 039402 1429 FS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSFS-QLVAE 1481 (1496)
Q Consensus 1429 f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~-~l~~~ 1481 (1496)
.+ +.|||+|||+++.+.. ||||+||++|+|+|.|++++++.++...|. .++..
T Consensus 510 ~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~~ 566 (623)
T PRK10261 510 QRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMAA 566 (623)
T ss_pred HHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHhh
Confidence 43 6899999999999976 999999999999999999999976655454 45543
No 49
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.9e-64 Score=646.61 Aligned_cols=543 Identities=20% Similarity=0.237 Sum_probs=428.3
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 292 IKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEG-YVLVSAFCVAKLVECLCQRFRVFRLQQLG 370 (1496)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g-~~l~~~l~~~~~~~~l~~~~~~~~~~~~~ 370 (1496)
+..+++.+++.++...++.++..++..+.|+++..++|.+.......... ..+++++++..++..++.....+...+.+
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (592)
T PRK10790 14 LLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAA 93 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456667778888888899999999999999999999764322211111 12233344445566677777777888899
Q ss_pred HHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 039402 371 IRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYI-HDPWLVLFEVALSILILYKNLGIASLAALF 449 (1496)
Q Consensus 371 ~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~ 449 (1496)
.++...++..+|+|.++++.....+.++|+++|++++|++.+.+++... ..+....+.+++++++++...++.+++.++
T Consensus 94 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~ 173 (592)
T PRK10790 94 VGVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIM 173 (592)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999875543 333333333333333333322333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 039402 450 GTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAI--- 526 (1496)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~--- 526 (1496)
++++.+.+.....+..++..++.++..++..+...|.++|+++||.|+.|+.+.+++.+..++..+...+.......
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (592)
T PRK10790 174 IFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLR 253 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444455566667777777888888899999999999999999999999999877655444332222221111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 039402 527 -SSFVFWGAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDL 605 (1496)
Q Consensus 527 -~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~ 605 (1496)
...+......++ ++.++.+ ...+.++.|.+++++.++..+..|+..++..+..+.+++.+.+||.++++.++.+...
T Consensus 254 ~~~~~~~~~~~~~-~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~ 331 (592)
T PRK10790 254 PLLSLFSALILCG-LLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN 331 (592)
T ss_pred HHHHHHHHHHHHH-HHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC
Confidence 111111111111 1122223 4577899999999999999999999999999999999999999999999765432211
Q ss_pred ccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---
Q 039402 606 VEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--- 682 (1496)
Q Consensus 606 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--- 682 (1496)
. ..+ .....++++|++|+|+. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 332 ~-~~~--~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~ 406 (592)
T PRK10790 332 D-DRP--LQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLS 406 (592)
T ss_pred C-ccC--CCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhh
Confidence 1 111 12346999999999963 357999999999999999999999999999999999999999999999984
Q ss_pred ----------eEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 ----------KAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 ----------~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
++||||+|++|++||+|||.+|.+.++++..++++.++++++++.+|+|.+|.+||+|.+||||||||++
T Consensus 407 ~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRia 486 (592)
T PRK10790 407 SLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLA 486 (592)
T ss_pred hCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 6999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
||||++++|+|+|||||||+||+++++.+.+ .+....+++|+|+|||+++.++.||+|++|++|++++.|+++|+++.+
T Consensus 487 lARaLl~~~~illlDEpts~LD~~t~~~i~~-~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~ 565 (592)
T PRK10790 487 LARVLVQTPQILILDEATANIDSGTEQAIQQ-ALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQ 565 (592)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999998865 455566789999999999999999999999999999999999999998
Q ss_pred cchHHHHHHh
Q 039402 833 TDFMELVGAH 842 (1496)
Q Consensus 833 ~~~~~~~~~~ 842 (1496)
+.|.++...+
T Consensus 566 ~~y~~l~~~~ 575 (592)
T PRK10790 566 GRYWQMYQLQ 575 (592)
T ss_pred CHHHHHHHHH
Confidence 8999887644
No 50
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=4.6e-65 Score=645.12 Aligned_cols=514 Identities=18% Similarity=0.139 Sum_probs=401.3
Q ss_pred HHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 039402 933 AQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAP 1012 (1496)
Q Consensus 933 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap 1012 (1496)
+.++..+..++.++.++.+.+... ......+..++++.++..++.++..++....+.+....++.++++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~i~~~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 100 (555)
T TIGR01194 26 LGLAGGLAIIALLASINNAIHEEN-----FLGQGSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAP 100 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-----cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 344445555666666665543110 000112233455566667788888888999999999999999999999999
Q ss_pred cccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1013 MSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSAREL 1092 (1496)
Q Consensus 1013 ~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l 1092 (1496)
+.||++.++|++++|+++|++.++..+.. +..++..++.+++.++++++.+|.+.++++.++++.+.+..++.+..++.
T Consensus 101 ~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~ 179 (555)
T TIGR01194 101 IEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKF 179 (555)
T ss_pred HHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988754 66777778888888888999999988876665555555444444444455
Q ss_pred HHHHHHhhchHHHHHHHhhcchHHHHHhccHH--HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1093 SRLVGVCKAPVIQHFAETVSGSTTIRSFDQES--RFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFL 1170 (1496)
Q Consensus 1093 ~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~--~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~ 1170 (1496)
.+......+.+.+++.|.+.|+.+||+|+.++ ...+++.+..+.+.+................+++..+...+.+ .
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 257 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCAL--F 257 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 55555667789999999999999999999954 4456666666655554443222222211112222211111111 1
Q ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCc--cC-CCC--CCCCCCcce
Q 039402 1171 ISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAI--EE-SRP--NDSWPSHGK 1245 (1496)
Q Consensus 1171 ~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~--~~-~~~--~~~wp~~g~ 1245 (1496)
+....+.++.|.+...+.|...+..++..+...+.+++....|.+|+.++.+.+.+++... ++ ... .+.....+.
T Consensus 258 ~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (555)
T TIGR01194 258 AAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDS 337 (555)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCce
Confidence 1112367888888888899999999999999999999999999999999976432221110 00 000 011123578
Q ss_pred EEEEeEEeEeCCC---CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcc
Q 039402 1246 IDLLDLQVRYAPQ---MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~---~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1322 (1496)
|+|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+++++.+++|++
T Consensus 338 i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~ 417 (555)
T TIGR01194 338 IELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDL 417 (555)
T ss_pred EEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhh
Confidence 9999999999753 2369999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 039402 1323 LSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSK 1402 (1496)
Q Consensus 1323 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ 1402 (1496)
++++||||++|++|+|+|+.| +.+|+++++++++++++++++++|+|+||. .+||||||||++||||++++|+
T Consensus 418 i~~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ 490 (555)
T TIGR01194 418 FSAIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRP 490 (555)
T ss_pred CcEEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999753 578999999999999999999999999994 7899999999999999999999
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHH-h-cCCcEEEEEccCcchhcccCEEEEEeCCeEeEe
Q 039402 1403 ILMLDEATASVDTATDNLIQQTLRQ-H-FSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1403 ILiLDEaTsslD~~Td~~Iq~~I~~-~-f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~ 1461 (1496)
|||||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|+||++|+|+|.
T Consensus 491 ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 491 ILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999987643 2 368999999999999999999999999999985
No 51
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3e-64 Score=643.70 Aligned_cols=550 Identities=21% Similarity=0.266 Sum_probs=437.1
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 289 VKLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQ 368 (1496)
Q Consensus 289 ~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 368 (1496)
.+.++.+++.+++.++...++.++..++.++.|++++.++|.+-...... ....++..+++..++..+......+...+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (576)
T TIGR02204 6 LAALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSG-LLNRYFAFLLVVALVLALGTAARFYLVTW 84 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666777888888888999999999999999999999743222111 11222333333444555666667778889
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 039402 369 LGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAA 447 (1496)
Q Consensus 369 ~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~ 447 (1496)
++.++...++..+|+|.++++....++.+.|++++++++|++.+.+++. .+..++...+.+++++++++...++.+++.
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999988889999999999999999988753 344444444455555444443333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 448 LFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAIS 527 (1496)
Q Consensus 448 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~ 527 (1496)
++.+++...+...+.+..++..++.++..+++.+...|.++|+++||.+++|+.+.+++.+..++..+...+........
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444557777888888899999999999999999999999999999998888776665444433333322222
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 039402 528 SFVFW--GAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDL 605 (1496)
Q Consensus 528 ~~~~~--~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~ 605 (1496)
..+.. .....+.++.++++.+..+.++.|.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 22211 1122344455677888889999999999999999999999999999999999999999999999765432111
Q ss_pred ccC-CCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC---
Q 039402 606 VEK-QPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--- 681 (1496)
Q Consensus 606 ~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--- 681 (1496)
... .........++++|++|+|+..+++++|+|+||++++||+++|+|+||||||||+++|+|+++|.+|+|.++|
T Consensus 325 ~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i 404 (576)
T TIGR02204 325 AHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDL 404 (576)
T ss_pred CCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEH
Confidence 111 1111122469999999999754346899999999999999999999999999999999999999999999998
Q ss_pred ----------eeEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 682 ----------TKAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 682 ----------~~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
.++||||+|++|++||+|||.+|.+ .++++..++++.+++.++++.+|.|++|.+|++|.+||||||||
T Consensus 405 ~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qr 484 (576)
T TIGR02204 405 RQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQR 484 (576)
T ss_pred HhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHH
Confidence 3699999999999999999999875 57888999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHh
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
++||||++++|+++|||||||+||+++++.+++ .+....+++|+|+|||+++.++.+|+|++|++|++++.|+++++.+
T Consensus 485 l~laRal~~~~~ililDEpts~lD~~~~~~i~~-~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 485 IAIARAILKDAPILLLDEATSALDAESEQLVQQ-ALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHhCCCeEEEeCcccccCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 999999999999999999999999999888765 4555567999999999999999999999999999999999999998
Q ss_pred cCcchHHHHH
Q 039402 831 SGTDFMELVG 840 (1496)
Q Consensus 831 ~~~~~~~~~~ 840 (1496)
.++.|.++..
T Consensus 564 ~~~~~~~l~~ 573 (576)
T TIGR02204 564 KGGLYARLAR 573 (576)
T ss_pred cCChHHHHHh
Confidence 8877877653
No 52
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=5.3e-67 Score=660.17 Aligned_cols=449 Identities=25% Similarity=0.413 Sum_probs=346.4
Q ss_pred cEEEEeeEEEecCC-CCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcC---------
Q 039402 617 ALDIVDGNFSWDIS-SHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG--------- 681 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~-~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g--------- 681 (1496)
.++++|++++|+.. ..+++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999632 135799999999999999999999999999999999999986 799998876
Q ss_pred --------eeEEEccCCc--cC-CCcHHHHhccCC----CCCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCC
Q 039402 682 --------TKAYVAQSPW--IQ-SGKIEDNILFGK----EMNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGIN 742 (1496)
Q Consensus 682 --------~~~yv~Q~~~--i~-~~ti~eNI~~g~----~~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 742 (1496)
.++|++|+|. ++ ..|+++|+.++. ..+. ++..++++.+++.+.. ....++..+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCCcc
Confidence 2699999985 33 358999986431 1222 2233344444442110 123567789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEEeCCeE
Q 039402 743 LSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVMKDGKI 819 (1496)
Q Consensus 743 LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 819 (1496)
|||||||||+|||||+.+|+++||||||++||+.+...+.+ ++..+ . .++|+|+|||+++.+.. ||+|++|++|++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i 235 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQ-LLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRC 235 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHH-HHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999998875 44443 3 38999999999999865 999999999999
Q ss_pred EEecChHHHHhcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchh
Q 039402 820 TQAGKYNDLINSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLV 899 (1496)
Q Consensus 820 ~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1496)
++.|+++++..... .. .
T Consensus 236 ~~~g~~~~~~~~~~-----------------------------------------------------~~-~--------- 252 (529)
T PRK15134 236 VEQNRAATLFSAPT-----------------------------------------------------HP-Y--------- 252 (529)
T ss_pred EEeCCHHHHhhCCC-----------------------------------------------------CH-H---------
Confidence 99887655421000 00 0
Q ss_pred HHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHH
Q 039402 900 QEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSS 979 (1496)
Q Consensus 900 ~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~ 979 (1496)
.+ .++.. .
T Consensus 253 ---~~-----------~~~~~--------------------------------------~-------------------- 260 (529)
T PRK15134 253 ---TQ-----------KLLNS--------------------------------------E-------------------- 260 (529)
T ss_pred ---HH-----------HHHHh--------------------------------------C--------------------
Confidence 00 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Q 039402 980 FCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAV 1059 (1496)
Q Consensus 980 ~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~ 1059 (1496)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhh
Q 039402 1060 MSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSR 1139 (1496)
Q Consensus 1060 ~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~ 1139 (1496)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHH
Q 039402 1140 PTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQ 1219 (1496)
Q Consensus 1140 ~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~ 1219 (1496)
. +
T Consensus 261 -----------------------------------~----------------------------------------~--- 262 (529)
T PRK15134 261 -----------------------------------P----------------------------------------S--- 262 (529)
T ss_pred -----------------------------------c----------------------------------------c---
Confidence 0 0
Q ss_pred hhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCC---------CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHH
Q 039402 1220 YTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAP---------QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLI 1290 (1496)
Q Consensus 1220 ~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~---------~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl 1290 (1496)
.++..+ ++ +....|+++|++++|.. +...+|+|+||+|++||++||+|+||||||||+
T Consensus 263 ---~~~~~~-------~~---~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl 329 (529)
T PRK15134 263 ---GDPVPL-------PE---PASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTG 329 (529)
T ss_pred ---cccccc-------CC---CCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHH
Confidence 000000 00 00114899999999952 124699999999999999999999999999999
Q ss_pred HHHhcccCCCccEEEECCeeCCCCChHH---HhcccEEEcccc--cccc-cchhhccCC-C--C--CC----cHHHHHHH
Q 039402 1291 QTLFRIVEPAAGQILIDGIDISLIGLHD---LRSRLSIIPQDP--VMFE-GTVRSNLDP-L--E--ES----TDEQIWEA 1355 (1496)
Q Consensus 1291 ~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~i~iIpQdp--~LF~-gTIR~NLdp-~--~--~~----sd~eI~~a 1355 (1496)
++|.|++ |++|+|.+||.++...+..+ +|++++++||+| .+|. .|+++|+.. . . .. .++++.++
T Consensus 330 k~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~ 408 (529)
T PRK15134 330 LALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAV 408 (529)
T ss_pred HHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHH
Confidence 9999998 58999999999998776544 477899999998 3665 499999963 1 1 01 13456778
Q ss_pred HHHcCCcH-HHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--Cc
Q 039402 1356 LDKCQLGD-EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DC 1432 (1496)
Q Consensus 1356 L~~~~L~~-~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~ 1432 (1496)
+++.++.+ ...+. ..+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++
T Consensus 409 l~~~~l~~~~~~~~-----------~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~ 477 (529)
T PRK15134 409 MEEVGLDPETRHRY-----------PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQL 477 (529)
T ss_pred HHHcCCCHHHHhcC-----------CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCC
Confidence 88888753 33222 356899999999999999999999999999999999999999999998642 78
Q ss_pred EEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCC
Q 039402 1433 TVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKS 1472 (1496)
Q Consensus 1433 TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~ 1472 (1496)
|||+|+|+++.+.. ||+|++|++|+|++.|+++++++++.
T Consensus 478 tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 478 AYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred EEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCC
Confidence 99999999999876 99999999999999999999987543
No 53
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.6e-64 Score=637.66 Aligned_cols=541 Identities=20% Similarity=0.224 Sum_probs=424.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 295 MFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLN-GRRDF--ENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGI 371 (1496)
Q Consensus 295 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~-~~~~~--~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~ 371 (1496)
+.+.+++.+++..++.++..++..+.|++++.+++... .+... .......++++++..++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888888899999999999999999999998642 22100 0111112223334445666777777778889999
Q ss_pred HHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 039402 372 RMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWY-IHDPWLVLFEVALSILILYKNLGIASLAALFG 450 (1496)
Q Consensus 372 ~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~ 450 (1496)
++...++..+|+|.++++....++.++|++++++++|++.+.+++.. +..+....+.+++++++++..-...+++.+++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997643 44444445555555444443333223332222
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 451 TVIV-MLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSF 529 (1496)
Q Consensus 451 ~~~~-~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~ 529 (1496)
++++ ..+...+.+..++..++.++..++..+.+.|.++|+++||.|+.|+.+.+++.+..++..+...+..........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (574)
T PRK11160 170 LLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQA 249 (574)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 223345566777778888899999999999999999999999999999998877665554444444333333222
Q ss_pred HHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccc
Q 039402 530 VFWGAP--TFVSVATFGTCILLNVPLESGKMLSAIATFRL-LQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLV 606 (1496)
Q Consensus 530 ~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~-l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~ 606 (1496)
+..... ..+.++.++.+. .++.++.|.+++++.+... ...|+..++..+..+.+++.|++||.++++.++..++..
T Consensus 250 ~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~ 328 (574)
T PRK11160 250 LMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFPT 328 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 222111 222334455555 4678899998887766544 346888899999999999999999999997654322111
Q ss_pred cCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe----
Q 039402 607 EKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT---- 682 (1496)
Q Consensus 607 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~---- 682 (1496)
.. +.......++++|++|+|+.+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 329 ~~-~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~ 406 (574)
T PRK11160 329 TS-TAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIAD 406 (574)
T ss_pred cc-CCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhh
Confidence 11 111123469999999999632 357999999999999999999999999999999999999999999999984
Q ss_pred ---------eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 ---------KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 ---------~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
++||+|+|++|++||+|||.++.+ .++++..++++.++++++++. |+|++|.+||+|.+||||||||++
T Consensus 407 ~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRia 485 (574)
T PRK11160 407 YSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLG 485 (574)
T ss_pred CCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHH
Confidence 599999999999999999999875 688899999999999999999 999999999999999999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
||||++++|+++|||||||+||+++++.+.+ .+....+++|+|+|||+++.++.||+|++|++|++++.|+++|+++++
T Consensus 486 lARall~~~~ililDE~ts~lD~~t~~~i~~-~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 564 (574)
T PRK11160 486 IARALLHDAPLLLLDEPTEGLDAETERQILE-LLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQQ 564 (574)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhcC
Confidence 9999999999999999999999999998865 455566799999999999999999999999999999999999999998
Q ss_pred cchHHHHH
Q 039402 833 TDFMELVG 840 (1496)
Q Consensus 833 ~~~~~~~~ 840 (1496)
+.|.+++.
T Consensus 565 g~y~~l~~ 572 (574)
T PRK11160 565 GRYYQLKQ 572 (574)
T ss_pred cHHHHHHh
Confidence 88888754
No 54
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3e-66 Score=705.94 Aligned_cols=251 Identities=20% Similarity=0.273 Sum_probs=204.6
Q ss_pred HHHHHHHHhHhHHHHHHHhh--cCCCCCCCCccCCCCCCCCCCcc--eEEEEeEEeEeC--CCCCccceeeeEEeeCCcE
Q 039402 1202 WFACDLENKIISVERIFQYT--CIPSEPPLAIEESRPNDSWPSHG--KIDLLDLQVRYA--PQMPLVLQGISCTFPGGEK 1275 (1496)
Q Consensus 1202 ~~~~~le~~~~sveRi~~~~--~~~~E~~~~~~~~~~~~~wp~~g--~I~f~nvs~~Y~--~~~~~vLk~iS~~I~~Gek 1275 (1496)
+...+.|+++.++||..+|. +.+.|.+.......+|. ..| .++++||+++|+ ++.+.+|+|||++|+|||+
T Consensus 715 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~ 791 (1394)
T TIGR00956 715 KAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTL 791 (1394)
T ss_pred hcccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEE
Confidence 33456778889999998873 34444433222211221 134 479999999985 3345799999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhcccC---CCccEEEECCeeCCCCChHHHhcccEEEccccc-ccccchhhccCCC------C
Q 039402 1276 TGIVGRTGSGKSTLIQTLFRIVE---PAAGQILIDGIDISLIGLHDLRSRLSIIPQDPV-MFEGTVRSNLDPL------E 1345 (1496)
Q Consensus 1276 vgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~gTIR~NLdp~------~ 1345 (1496)
+||+||||||||||+++|.|+.+ |++|+|.+||.++. .++|++++||||++. ++..||||||+.. .
T Consensus 792 ~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~ 867 (1394)
T TIGR00956 792 TALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPK 867 (1394)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCC
Confidence 99999999999999999999998 78999999999985 367899999999876 4567999999721 1
Q ss_pred CCcHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC-EEEEEcCCCCCCHHHHHH
Q 039402 1346 ESTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSK-ILMLDEATASVDTATDNL 1420 (1496)
Q Consensus 1346 ~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~-ILiLDEaTsslD~~Td~~ 1420 (1496)
+.+++ .+.++++..++.+ ..|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||+.+...
T Consensus 868 ~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~ 940 (1394)
T TIGR00956 868 SVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWS 940 (1394)
T ss_pred CCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHH
Confidence 33443 3567788777643 46889999888999999999999999999997 999999999999999999
Q ss_pred HHHHHHHh-cCCcEEEEEccCcchh--cccCEEEEEeCC-eEeEecChhh
Q 039402 1421 IQQTLRQH-FSDCTVLTIAHRITSV--IDSDLVLLLNHG-LIEEFDNPAN 1466 (1496)
Q Consensus 1421 Iq~~I~~~-f~~~TVI~IAHRl~ti--~~~DrIlVL~~G-~IvE~g~p~~ 1466 (1496)
|++.|++. .+++|||+++|++++. ..||+|++|++| +++++|++.+
T Consensus 941 i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 941 ICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99999987 4689999999999974 469999999997 9999999743
No 55
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.6e-63 Score=647.88 Aligned_cols=547 Identities=19% Similarity=0.234 Sum_probs=447.9
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 289 VKLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQ 368 (1496)
Q Consensus 289 ~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 368 (1496)
.+.++..++.+++.+....++.++..++.++.|++++.++|.+..... ....+.+++++++..++..++.....+...+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~-~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~ 205 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG-LSTLSVLALAMLAVAIFEPALGGLRTYLFAH 205 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556677788888888899999999999999999999997753322 1223344455555666677778888888889
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 039402 369 LGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAA 447 (1496)
Q Consensus 369 ~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~ 447 (1496)
++.++...++..+|+|.++++....++.++|++++++ +|++.+.+++. .+.......+.+++.+++++..-++.+++.
T Consensus 206 ~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 284 (694)
T TIGR01846 206 LTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVV 284 (694)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 69999998753 333333333333444445554455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 448 LFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAIS 527 (1496)
Q Consensus 448 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~ 527 (1496)
++++++...+...+.+..++..++.++..+++.+.+.|.++|+++||.++.|+.+.+++.+..++..+...+........
T Consensus 285 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (694)
T TIGR01846 285 IGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIA 364 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666666677777788888888999999999999999999999999999999998876665555544444443333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 039402 528 SFVFWGAP--TFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDL 605 (1496)
Q Consensus 528 ~~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~ 605 (1496)
..+..... ..+.++.+|++.+..+.+|.|.++++..+...+..|+..+...+..+.+++++++|+.++++.++..+..
T Consensus 365 ~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 444 (694)
T TIGR01846 365 GQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA 444 (694)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC
Confidence 32222221 2233456788888889999999999999999999999999999999999999999999999766433211
Q ss_pred ccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---
Q 039402 606 VEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--- 682 (1496)
Q Consensus 606 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--- 682 (1496)
...+.......++++|++|+|+.+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 445 -~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~ 522 (694)
T TIGR01846 445 -GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLA 522 (694)
T ss_pred -CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehh
Confidence 111111123469999999999643 457999999999999999999999999999999999999999999999984
Q ss_pred ----------eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 683 ----------KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 683 ----------~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
++||+|+|++|++|++|||.++.+ .++++..++++.++++++++.+|.|.+|.+|++|.+||||||||+
T Consensus 523 ~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri 602 (694)
T TIGR01846 523 IADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRI 602 (694)
T ss_pred hCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHH
Confidence 589999999999999999999864 678888999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhc
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
+||||++++|+|+|||||||+||+++++.+.+. +....+++|+|+|||+++.++.||+|++|++|++++.|+++++++.
T Consensus 603 ~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~ 681 (694)
T TIGR01846 603 AIARALVGNPRILIFDEATSALDYESEALIMRN-MREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL 681 (694)
T ss_pred HHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc
Confidence 999999999999999999999999999988764 4555678999999999999999999999999999999999999998
Q ss_pred CcchHHHHH
Q 039402 832 GTDFMELVG 840 (1496)
Q Consensus 832 ~~~~~~~~~ 840 (1496)
++.|.++..
T Consensus 682 ~~~y~~l~~ 690 (694)
T TIGR01846 682 QGLYARLWQ 690 (694)
T ss_pred CChHHHHHH
Confidence 888888764
No 56
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=6.3e-64 Score=633.83 Aligned_cols=505 Identities=20% Similarity=0.225 Sum_probs=396.0
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 294 AMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRM 373 (1496)
Q Consensus 294 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~i 373 (1496)
.+++.+++.++...++.++..++..+.|++++.++|.+..... ....+.++.++++..++..++.....+...+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRS 84 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677778888888999999999999999999987653321 111111112222334455666666667777889999
Q ss_pred HHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 039402 374 RAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWY-IHDPWLVLFEVALSILILYKNLGIASLAALFGTV 452 (1496)
Q Consensus 374 r~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~ 452 (1496)
...++..+|+|.++++....++.++|+++|++++|++++.+++.. +..+....+.+++++++++..-+..+++.++.++
T Consensus 85 ~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~ 164 (529)
T TIGR02868 85 LGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLL 164 (529)
T ss_pred HHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987653 3344444444444444444333333333333333
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 453 IVMLVNIPL-GRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVF 531 (1496)
Q Consensus 453 ~~~~~~~~~-~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~ 531 (1496)
++.++...+ .+..++..++..+..++..+...|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (529)
T TIGR02868 165 LAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQ 244 (529)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333233 3444556677778889999999999999999999999999999998877665555555444444333332
Q ss_pred HHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCC
Q 039402 532 WGAP--TFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQ 609 (1496)
Q Consensus 532 ~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~ 609 (1496)
.... ..+.++.++.+.+.++.++.|.+.+++.+...+..|+..++..+..+.+++++.+|+.++++.++..++.....
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~ 324 (529)
T TIGR02868 245 LLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPA 324 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCC
Confidence 2222 22334456777778889999999999999999999999999999999999999999999997665322111100
Q ss_pred C--CCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC------
Q 039402 610 P--SGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------ 681 (1496)
Q Consensus 610 ~--~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g------ 681 (1496)
+ .......++++|++|+|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 325 ~~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~ 402 (529)
T TIGR02868 325 AGALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL 402 (529)
T ss_pred CcccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH
Confidence 0 1112346999999999963 34799999999999999999999999999999999999999999999999
Q ss_pred ------eeEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 682 ------TKAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 682 ------~~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
.++||||+|++|++||+|||.+|.+ .++++++++++.++++++++.+|+|++|.+||+|.+||||||||++||
T Consensus 403 ~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiA 482 (529)
T TIGR02868 403 QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALA 482 (529)
T ss_pred HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHH
Confidence 6899999999999999999999865 688999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQV 802 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~ 802 (1496)
||++++|+|+||||||||||+++++.+.+.+ ....+++|+|+||||+
T Consensus 483 Rall~~~~iliLDE~TSaLD~~te~~I~~~l-~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 483 RALLADAPILLLDEPTEHLDAGTESELLEDL-LAALSGKTVVVITHHL 529 (529)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHhcCCCEEEEEecCC
Confidence 9999999999999999999999999997654 4566799999999985
No 57
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.1e-63 Score=635.99 Aligned_cols=541 Identities=20% Similarity=0.272 Sum_probs=425.5
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 294 AMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRM 373 (1496)
Q Consensus 294 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~i 373 (1496)
.+++.+++.+++.+++.++..++.++.|+++..++|.+..... .. .+++.+++..++..+......+...++..++
T Consensus 12 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK13657 12 QYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD---IF-PLLAAWAGFGLFNIIAGVLVARHADRLAHRR 87 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677778888888999999999999999999998764321 11 1122222222333344444555667888899
Q ss_pred HHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 039402 374 RAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAALFGTV 452 (1496)
Q Consensus 374 r~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~ 452 (1496)
+..++..+|+|.++++.....+.+.|+++++++.|++.+.+... .+.......+..++.+++++..-++.+++.+++++
T Consensus 88 ~~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~ 167 (588)
T PRK13657 88 RLAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGI 167 (588)
T ss_pred HHHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987533 33333333333333333333333333344444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 039402 453 IVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFV-- 530 (1496)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~-- 530 (1496)
+...+...+.+..++.+++.++..++......|.++|++.||.|+.|+.+.+++.+.-++..+...+..........+
T Consensus 168 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (588)
T PRK13657 168 VYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNR 247 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566677788888888999999999999999999999999999999888877655443333322222221111111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCC
Q 039402 531 FWGAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQP 610 (1496)
Q Consensus 531 ~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~ 610 (1496)
.......+.+++++++.+..+.+|.|.+++++.++..+..|+..+...+..+.+++.+++|+.++++.++..+......+
T Consensus 248 ~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 327 (588)
T PRK13657 248 AASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAID 327 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCC
Confidence 11122334556778888889999999999999999999999999999999999999999999999876443221111111
Q ss_pred CCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------
Q 039402 611 SGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------- 682 (1496)
Q Consensus 611 ~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------- 682 (1496)
.......++++|++|+|+. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 328 ~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~ 405 (588)
T PRK13657 328 LGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRA 405 (588)
T ss_pred cCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHH
Confidence 1112246999999999963 357999999999999999999999999999999999999999999999983
Q ss_pred -----eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHH
Q 039402 683 -----KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 756 (1496)
Q Consensus 683 -----~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 756 (1496)
++||||+|++|++|++|||.++.+ .++++..++++.++++++++.+|.|.+|.+|++|.+||||||||++||||
T Consensus 406 ~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARa 485 (588)
T PRK13657 406 SLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARA 485 (588)
T ss_pred HHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHH
Confidence 699999999999999999999964 67888899999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchH
Q 039402 757 LYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFM 836 (1496)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~ 836 (1496)
++++|+|+|||||||+||+++++.+++.+ ....+++|+|+||||++.++.||+|++|++|++++.|+++++++.++.|.
T Consensus 486 ll~~~~iliLDEpts~LD~~t~~~i~~~l-~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~y~ 564 (588)
T PRK13657 486 LLKDPPILILDEATSALDVETEAKVKAAL-DELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGRFA 564 (588)
T ss_pred HhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCChHH
Confidence 99999999999999999999999997654 44557899999999999999999999999999999999999998888888
Q ss_pred HHHHH
Q 039402 837 ELVGA 841 (1496)
Q Consensus 837 ~~~~~ 841 (1496)
++...
T Consensus 565 ~l~~~ 569 (588)
T PRK13657 565 ALLRA 569 (588)
T ss_pred HHHHH
Confidence 87753
No 58
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-66 Score=651.89 Aligned_cols=443 Identities=23% Similarity=0.355 Sum_probs=341.1
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC--CccEEEEcCe------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK--ISGTLKLCGT------------ 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~--~~G~i~~~g~------------ 682 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|.
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 589999999995 35799999999999999999999999999999999999996 8999999872
Q ss_pred --eEEEccCCccCC-CcHHHHhccCCCC------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 --KAYVAQSPWIQS-GKIEDNILFGKEM------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 --~~yv~Q~~~i~~-~ti~eNI~~g~~~------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++||+|++.++. .|++||+.++... +.+...+.+ .+-++.+.. .........+|||||||||+|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l--~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRA-----QKLLAQLKL--DINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHH-----HHHHHHcCC--CCCcccchhhCCHHHHHHHHH
Confidence 699999997765 5999999987431 222111111 122333322 223356778999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
|||++.+|+++||||||++||+.....+.+.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+.+++..
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~-- 232 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTE-- 232 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCH--
Confidence 999999999999999999999999988876443333458999999999999865 99999999999988765322100
Q ss_pred cchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccchHH
Q 039402 833 TDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVGFS 912 (1496)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 912 (1496)
++
T Consensus 233 ---------------------------------------------------------------------~~--------- 234 (506)
T PRK13549 233 ---------------------------------------------------------------------DD--------- 234 (506)
T ss_pred ---------------------------------------------------------------------HH---------
Confidence 00
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 913 VYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATA 992 (1496)
Q Consensus 913 ~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~ 992 (1496)
......+ .
T Consensus 235 ----~~~~~~~-----------------------------------~--------------------------------- 242 (506)
T PRK13549 235 ----IITMMVG-----------------------------------R--------------------------------- 242 (506)
T ss_pred ----HHHHhhC-----------------------------------c---------------------------------
Confidence 0000000 0
Q ss_pred HHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 039402 993 GYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFV 1072 (1496)
Q Consensus 993 ~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i 1072 (1496)
+
T Consensus 243 -------------------~------------------------------------------------------------ 243 (506)
T PRK13549 243 -------------------E------------------------------------------------------------ 243 (506)
T ss_pred -------------------C------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 039402 1073 PAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLG 1152 (1496)
Q Consensus 1073 p~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~ 1152 (1496)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCcc
Q 039402 1153 LRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIE 1232 (1496)
Q Consensus 1153 ~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~ 1232 (1496)
.. + . .|.++
T Consensus 244 -------------------------~~------------------------------------~---~--~~~~~----- 252 (506)
T PRK13549 244 -------------------------LT------------------------------------A---L--YPREP----- 252 (506)
T ss_pred -------------------------cc------------------------------------c---c--ccccc-----
Confidence 00 0 0 00000
Q ss_pred CCCCCCCCCCcceEEEEeEEeEeCC-CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-CCccEEEECCee
Q 039402 1233 ESRPNDSWPSHGKIDLLDLQVRYAP-QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-PAAGQILIDGID 1310 (1496)
Q Consensus 1233 ~~~~~~~wp~~g~I~f~nvs~~Y~~-~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-p~~G~I~IDG~d 1310 (1496)
++ +....|+++|++++|.. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.|
T Consensus 253 ---~~---~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~ 326 (506)
T PRK13549 253 ---HT---IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKP 326 (506)
T ss_pred ---cC---CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEE
Confidence 00 11125999999999952 12359999999999999999999999999999999999998 599999999999
Q ss_pred CCCCCh-HHHhcccEEEcccc---cccc-cchhhccCCC--CC------Cc----HHHHHHHHHHcCCc-HHHHhccCCc
Q 039402 1311 ISLIGL-HDLRSRLSIIPQDP---VMFE-GTVRSNLDPL--EE------ST----DEQIWEALDKCQLG-DEVRKKEGKL 1372 (1496)
Q Consensus 1311 I~~i~l-~~LR~~i~iIpQdp---~LF~-gTIR~NLdp~--~~------~s----d~eI~~aL~~~~L~-~~i~~lp~gL 1372 (1496)
+...+. +..|.+++|+||+| .+|. .|+.+|+... .. .+ .+++.++++++++. +. .
T Consensus 327 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~ 399 (506)
T PRK13549 327 VKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTAS-------P 399 (506)
T ss_pred CCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCC-------c
Confidence 875543 34677899999997 3664 5999999631 11 11 13466677777763 12 2
Q ss_pred ccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEE
Q 039402 1373 DSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLV 1450 (1496)
Q Consensus 1373 dt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrI 1450 (1496)
|. ....||||||||++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|
T Consensus 400 ~~----~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v 475 (506)
T PRK13549 400 EL----AIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRV 475 (506)
T ss_pred cc----ccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEE
Confidence 22 235799999999999999999999999999999999999999999998753 47899999999999876 9999
Q ss_pred EEEeCCeEeEecChhhHh
Q 039402 1451 LLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1451 lVL~~G~IvE~g~p~~Ll 1468 (1496)
++|++|+++..|+++++.
T Consensus 476 ~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 476 LVMHEGKLKGDLINHNLT 493 (506)
T ss_pred EEEECCEEEEEeccccCC
Confidence 999999999999998874
No 59
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-66 Score=651.95 Aligned_cols=441 Identities=20% Similarity=0.315 Sum_probs=337.2
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--------------~ 682 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 588999999995 35799999999999999999999999999999999999999999999987 2
Q ss_pred eEEEccCCccCC-CcHHHHhccCCCC----------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKEM----------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~~----------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
++|++|++.++. .|++||+.++... +.+..++. ..+-++.+.. ....+....+|||||||||
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~gl--~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVR-----AAMMLLRVGL--KVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHH-----HHHHHHHcCC--CCCcccchhhCCHHHHHHH
Confidence 699999987765 5999999876420 11111110 1111222221 1223567789999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
+|||||+.+|+++||||||++||+.+...+.+.+.+...+|+|+|+|||+++++.. ||++++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999998876443333458999999999999875 99999999999988776544210
Q ss_pred cCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccch
Q 039402 831 SGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVG 910 (1496)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~ 910 (1496)
. +..
T Consensus 235 ~-----~~~----------------------------------------------------------------------- 238 (510)
T PRK09700 235 D-----DIV----------------------------------------------------------------------- 238 (510)
T ss_pred H-----HHH-----------------------------------------------------------------------
Confidence 0 000
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 911 FSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLA 990 (1496)
Q Consensus 911 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~ 990 (1496)
....+. . ..
T Consensus 239 --------~~~~~~----------------------------~----~~------------------------------- 247 (510)
T PRK09700 239 --------RLMVGR----------------------------E----LQ------------------------------- 247 (510)
T ss_pred --------HHhcCC----------------------------C----cc-------------------------------
Confidence 000000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 039402 991 TAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIV 1070 (1496)
Q Consensus 991 ~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1070 (1496)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 039402 1071 FVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEW 1150 (1496)
Q Consensus 1071 ~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1150 (1496)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCC
Q 039402 1151 LGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLA 1230 (1496)
Q Consensus 1151 l~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~ 1230 (1496)
. + +...++.++
T Consensus 248 ------------------------~----------------------------------------~---~~~~~~~~~-- 258 (510)
T PRK09700 248 ------------------------N----------------------------------------R---FNAMKENVS-- 258 (510)
T ss_pred ------------------------c----------------------------------------c---ccccccccc--
Confidence 0 0 000000000
Q ss_pred ccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCee
Q 039402 1231 IEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGID 1310 (1496)
Q Consensus 1231 ~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~d 1310 (1496)
++ +....|+++|++++|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+
T Consensus 259 -----~~---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~ 326 (510)
T PRK09700 259 -----NL---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKD 326 (510)
T ss_pred -----cC---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEE
Confidence 00 0112599999999773 28999999999999999999999999999999999999999999999999
Q ss_pred CCCCCh-HHHhcccEEEcccc---ccccc-chhhccCCCCC------------Cc----HHHHHHHHHHcCCc-HHHHhc
Q 039402 1311 ISLIGL-HDLRSRLSIIPQDP---VMFEG-TVRSNLDPLEE------------ST----DEQIWEALDKCQLG-DEVRKK 1368 (1496)
Q Consensus 1311 I~~i~l-~~LR~~i~iIpQdp---~LF~g-TIR~NLdp~~~------------~s----d~eI~~aL~~~~L~-~~i~~l 1368 (1496)
+...+. ..+|++++|+||++ .+|.+ |+++|+..... .+ .+++.+++++.++. +.
T Consensus 327 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---- 402 (510)
T PRK09700 327 ISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHS---- 402 (510)
T ss_pred CCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCC----
Confidence 876543 45778999999984 57765 99999863211 01 12355667776653 22
Q ss_pred cCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-
Q 039402 1369 EGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID- 1446 (1496)
Q Consensus 1369 p~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~- 1446 (1496)
.+.+ ...||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..
T Consensus 403 ---~~~~----~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~ 475 (510)
T PRK09700 403 ---VNQN----ITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITV 475 (510)
T ss_pred ---ccCc----cccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh
Confidence 2333 34699999999999999999999999999999999999999999998753 47899999999998865
Q ss_pred cCEEEEEeCCeEeEecChhh
Q 039402 1447 SDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1447 ~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
||+|++|++|++++.+++.+
T Consensus 476 ~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 476 CDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred CCEEEEEECCEEEEEecCcc
Confidence 99999999999999887733
No 60
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.3e-63 Score=631.90 Aligned_cols=529 Identities=22% Similarity=0.291 Sum_probs=419.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 039402 310 TVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAALIAMIYNKGLTLS 389 (1496)
Q Consensus 310 ~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~ls 389 (1496)
.++..++..+.|++++.++|.+..........+.+++.+++..++..++.....+...+.+.++...++..+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45566677788999999999775432111222333444555555666666666677778899999999999999999999
Q ss_pred cchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 390 SQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGI-ASLAALFGTVIVMLVNIPLGRVQEN 467 (1496)
Q Consensus 390 ~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~-~~l~~l~~~~~~~~~~~~~~~~~~~ 467 (1496)
.....++++|++++++++|++.+.+... .+..++..++..++++++++..+++ .+++.++++++.+.+...+.+...+
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986543 3455555545444444444323333 3344444445555555666777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Q 039402 468 FQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFWGA--PTFVSVATFGT 545 (1496)
Q Consensus 468 ~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~--p~~v~~~~f~~ 545 (1496)
..++.++..++..+...|.++|+++||.+++|+.+.+++.+..++..+...+..........+.... ...+.++.+|.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888888999999999999999999999888886654433333333222222222111111 12233455677
Q ss_pred HHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCccEEEEeeEE
Q 039402 546 CILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSGSSETALDIVDGNF 625 (1496)
Q Consensus 546 ~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~ 625 (1496)
+.+.++.++.|.+++++.++..+..|+..++..+..+.+++++.+|+.++++.++..+.... +.......+++++++|
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~--~~~~~~~~I~~~~v~~ 321 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSE--PVPEGRGELDVNIRQF 321 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC--CCCCCCCcEEEEEEEE
Confidence 87888999999999999999999999999999999999999999999999976543221111 1111234699999999
Q ss_pred EecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eEEEccCCcc
Q 039402 626 SWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYVAQSPWI 692 (1496)
Q Consensus 626 ~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~yv~Q~~~i 692 (1496)
+|+.+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++||+|+|++
T Consensus 322 ~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l 400 (569)
T PRK10789 322 TYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFL 400 (569)
T ss_pred ECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCee
Confidence 99743 467999999999999999999999999999999999999999999999984 5999999999
Q ss_pred CCCcHHHHhccCC-CCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCC
Q 039402 693 QSGKIEDNILFGK-EMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFS 771 (1496)
Q Consensus 693 ~~~ti~eNI~~g~-~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~s 771 (1496)
|++|++|||.++. +.++++++++++.+++++++..+|+|++|.+|++|.+||||||||++||||++++|+|+|||||||
T Consensus 401 f~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts 480 (569)
T PRK10789 401 FSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALS 480 (569)
T ss_pred ccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccc
Confidence 9999999999996 478889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchHHHHHHh
Q 039402 772 AVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFMELVGAH 842 (1496)
Q Consensus 772 aLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~ 842 (1496)
+||+++++++.+. +....+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++.|.++...+
T Consensus 481 ~LD~~~~~~i~~~-l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 481 AVDGRTEHQILHN-LRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred cCCHHHHHHHHHH-HHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 9999999998765 455567999999999999999999999999999999999999998888888876543
No 61
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.7e-63 Score=631.10 Aligned_cols=540 Identities=24% Similarity=0.330 Sum_probs=429.1
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 293 KAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIR 372 (1496)
Q Consensus 293 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 372 (1496)
+.+++ ++ .++...++.++..++....|.++..+++.+... ......+...+++..++..++.....+...+++.+
T Consensus 8 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 82 (567)
T COG1132 8 LKYLK-YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD---LGELLELLLLLLLLALLGGVLRALQSYLGSRLGQK 82 (567)
T ss_pred HHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444 67 888888899999999999999999999887611 11122222233333334555566666667777789
Q ss_pred HHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 039402 373 MRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYIHDPWL-VLFEVALSILILYKNLGIASLAALFGT 451 (1496)
Q Consensus 373 ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~-~pl~i~~~~~lL~~~lg~~~l~~l~~~ 451 (1496)
+...++..+|+|.++++...++++++|++++++++|++.+.+++.....+.. .++.++..+++++..-...+++.+++.
T Consensus 83 ~~~~lr~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~ 162 (567)
T COG1132 83 IVADLRRDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLIL 162 (567)
T ss_pred HHHHHHHHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998765433333 334444444444433222333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 039402 452 VIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFV- 530 (1496)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~- 530 (1496)
+++......+.++.++..++..+..++..+.+.|.++|++++|.++.|+...++..+..+...+...+..........+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (567)
T COG1132 163 PLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLM 242 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455556656688888888999999999999999999999999999887776655444333322222222222211
Q ss_pred HH-HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCC
Q 039402 531 FW-GAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQ 609 (1496)
Q Consensus 531 ~~-~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~ 609 (1496)
.. ..-..+.++.++.+.+..+.++.|.+.+++.++..+..|+..+...+..+.++..|.+|+.++++.++...+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~- 321 (567)
T COG1132 243 LLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC-
Confidence 11 1222334455566667788899999999999999999999999999999999999999999999875432221111
Q ss_pred CCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------
Q 039402 610 PSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------- 682 (1496)
Q Consensus 610 ~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------- 682 (1496)
.......++++|++|+|+. ++++|+|+||++++||++|||||+|||||||+++|+|+++|++|+|.+||.
T Consensus 322 -~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~ 398 (567)
T COG1132 322 -LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISL 398 (567)
T ss_pred -CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCH
Confidence 1123346999999999973 468999999999999999999999999999999999999999999999884
Q ss_pred ------eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHH
Q 039402 683 ------KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 755 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 755 (1496)
++||||+|++|++||+|||.+|.+ .++++..++++.++++++++.+|+|.+|.+||+|.+||||||||++|||
T Consensus 399 ~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiAR 478 (567)
T COG1132 399 DSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIAR 478 (567)
T ss_pred HHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHH
Confidence 599999999999999999999987 6889999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcch
Q 039402 756 ALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDF 835 (1496)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~ 835 (1496)
|+++||+|++||||||+||+++++.+.+. +....++||+|+|+||++.+..||+|+||++|+|++.|+|+|++++++.|
T Consensus 479 all~~~~ILILDEaTSalD~~tE~~I~~~-l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y 557 (567)
T COG1132 479 ALLRNPPILILDEATSALDTETEALIQDA-LKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLY 557 (567)
T ss_pred HHhcCCCEEEEeccccccCHHhHHHHHHH-HHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHH
Confidence 99999999999999999999999988654 44555889999999999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 039402 836 MELVGAH 842 (1496)
Q Consensus 836 ~~~~~~~ 842 (1496)
.+++..+
T Consensus 558 ~~l~~~~ 564 (567)
T COG1132 558 ARLYQAQ 564 (567)
T ss_pred HHHHHHh
Confidence 9987654
No 62
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-63 Score=589.16 Aligned_cols=529 Identities=22% Similarity=0.316 Sum_probs=427.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 305 VTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAALIAMIYNK 384 (1496)
Q Consensus 305 ~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L~~~iy~K 384 (1496)
..+++..+..++...+-+++-..++.+-..+. ....+.++++++++.++++++.........+.+.++|..|+..+++|
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL-FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777777777777777766544332 22334556677777888899888888899999999999999999999
Q ss_pred HhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHH---HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 039402 385 GLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPW---LVLFEVALSILILYKNLGIASLAALFGTVIVMLVNIP 460 (1496)
Q Consensus 385 ~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~---~~pl~i~~~~~lL~~~lg~~~l~~l~~~~~~~~~~~~ 460 (1496)
..++++...++.++|++.++++.-++.+..++. |++... ..|+-+.++++...+. ++++-++.+.++.++...
T Consensus 83 l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~---aalIllit~PlIPlfMil 159 (559)
T COG4988 83 LAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWA---AALILLITAPLIPLFMIL 159 (559)
T ss_pred HHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998754 444433 3455555554444433 333444444444445556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 461 LGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKI----INLRKRETGWLKKYVYTSAISSFVFWGAPT 536 (1496)
Q Consensus 461 ~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i----~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~ 536 (1496)
+++..++..+++++.-..-....-+.|+|+.++|.|+..+...++| ++.|+.-|+.+|-.....++.-++...+ +
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~ls-i 238 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLS-I 238 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 6777777788888888888888999999999999999988877777 4567777777776655555444443333 2
Q ss_pred HHHHHHHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccC-CCCCCC
Q 039402 537 FVSVATFGTCILLN-VPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEK-QPSGSS 614 (1496)
Q Consensus 537 ~v~~~~f~~~~~~~-~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~-~~~~~~ 614 (1496)
.+..+ +.+.-+++ ++++-...+.++.+---+..|++.+...++.-.++..+.+.+..|++.+....+.... ......
T Consensus 239 AlvAv-~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~ 317 (559)
T COG4988 239 ALVAV-YIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEP 317 (559)
T ss_pred HHHHH-HHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCC
Confidence 22233 33344556 6999999999998888888999999999999999999999999999887654332221 111112
Q ss_pred CccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 615 ETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
...++.+|++|.|+. ++++++|+||++++|+++||||+||||||||+++|+|+.+|++|+|.+||.
T Consensus 318 ~~ei~~~~l~~~y~~--g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k 395 (559)
T COG4988 318 PIEISLENLSFRYPD--GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRK 395 (559)
T ss_pred CceeeecceEEecCC--CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHh
Confidence 223445588888863 448999999999999999999999999999999999999999999999983
Q ss_pred -eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC
Q 039402 683 -KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 760 (1496)
Q Consensus 683 -~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1496)
++||+|+|.+|++|+||||+++++ .+++...++++..++.+.++. |+|.+|++||+|.+|||||+|||+||||++++
T Consensus 396 ~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~ 474 (559)
T COG4988 396 QISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSP 474 (559)
T ss_pred HeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCC
Confidence 699999999999999999999987 678899999999999999999 99999999999999999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchHHHHH
Q 039402 761 SDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFMELVG 840 (1496)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~ 840 (1496)
+++||||||||+||+++++.|. +.+..+.++||+|+||||++.+..+|+|++|++|+++++|+|+++.++++.|.+++.
T Consensus 475 ~~l~llDEpTA~LD~etE~~i~-~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~ 553 (559)
T COG4988 475 ASLLLLDEPTAHLDAETEQIIL-QALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLK 553 (559)
T ss_pred CCEEEecCCccCCCHhHHHHHH-HHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHH
Confidence 9999999999999999988775 556667788999999999999999999999999999999999999999999999886
Q ss_pred HhH
Q 039402 841 AHE 843 (1496)
Q Consensus 841 ~~~ 843 (1496)
.++
T Consensus 554 ~q~ 556 (559)
T COG4988 554 QQE 556 (559)
T ss_pred HHh
Confidence 543
No 63
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.5e-66 Score=650.09 Aligned_cols=438 Identities=24% Similarity=0.400 Sum_probs=339.4
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCC--CCCccEEEEc---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV--PKISGTLKLC--------------- 680 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~--~~~~G~i~~~--------------- 680 (1496)
++++|++++|. ++++|+|+||++.+||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 46789999985 357999999999999999999999999999999999997 7999999885
Q ss_pred --------C-----------------------eeEEEccC-CccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhc
Q 039402 681 --------G-----------------------TKAYVAQS-PWIQS-GKIEDNILFGKE---MNR----ERYNAVLDACS 720 (1496)
Q Consensus 681 --------g-----------------------~~~yv~Q~-~~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~ 720 (1496)
| .++|++|+ +.++. .|++||+.++.. .+. ++..++++.++
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 157 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQ 157 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 1 26999997 55554 599999987531 222 22333444444
Q ss_pred hhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEc
Q 039402 721 LKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVT 799 (1496)
Q Consensus 721 l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvt 799 (1496)
+.+ ...+...+|||||||||+|||||+.+|+++||||||++||+++..++.+.+.+... .|+|||+||
T Consensus 158 l~~-----------~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivt 226 (520)
T TIGR03269 158 LSH-----------RITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTS 226 (520)
T ss_pred Chh-----------hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe
Confidence 422 22456789999999999999999999999999999999999999998764433323 389999999
Q ss_pred cCcCcccc-CCEEEEEeCCeEEEecChHHHHhcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhh
Q 039402 800 HQVEFLPA-ADLILVMKDGKITQAGKYNDLINSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEV 878 (1496)
Q Consensus 800 H~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1496)
|+++++.. ||+|++|++|+++..|+++++...
T Consensus 227 Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~----------------------------------------------- 259 (520)
T TIGR03269 227 HWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV----------------------------------------------- 259 (520)
T ss_pred CCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH-----------------------------------------------
Confidence 99999865 999999999999876655332100
Q ss_pred ccccCCCCchhhhhhhccchhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCC
Q 039402 879 ENNKGQNDKADEVAVSKGQLVQEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDV 958 (1496)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~ 958 (1496)
|.. .
T Consensus 260 --------------------------------------~~~--------------------------------------~ 263 (520)
T TIGR03269 260 --------------------------------------FME--------------------------------------G 263 (520)
T ss_pred --------------------------------------HHh--------------------------------------h
Confidence 000 0
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhh
Q 039402 959 KPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLG 1038 (1496)
Q Consensus 959 ~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~ 1038 (1496)
T Consensus 264 -------------------------------------------------------------------------------- 263 (520)
T TIGR03269 264 -------------------------------------------------------------------------------- 263 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHH
Q 039402 1039 IPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIR 1118 (1496)
Q Consensus 1039 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIR 1118 (1496)
..
T Consensus 264 -----------------------------------------------------~~------------------------- 265 (520)
T TIGR03269 264 -----------------------------------------------------VS------------------------- 265 (520)
T ss_pred -----------------------------------------------------ch-------------------------
Confidence 00
Q ss_pred HhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 039402 1119 SFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLA 1198 (1496)
Q Consensus 1119 af~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~ 1198 (1496)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCC---CCCccceeeeEEeeCCcE
Q 039402 1199 TLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAP---QMPLVLQGISCTFPGGEK 1275 (1496)
Q Consensus 1199 ~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~---~~~~vLk~iS~~I~~Gek 1275 (1496)
..+. +... + +....|+++|++++|.. +..++|+|+||+|++||+
T Consensus 266 -------~~~~--------------~~~~--------~----~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~ 312 (520)
T TIGR03269 266 -------EVEK--------------ECEV--------E----VGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEI 312 (520)
T ss_pred -------hhcc--------------cccc--------C----CCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCE
Confidence 0000 0000 0 01125999999999953 234699999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhcccCCCccEEEEC-Ce---eCCCCC---hHHHhcccEEEccccccccc-chhhccCC-CC-
Q 039402 1276 TGIVGRTGSGKSTLIQTLFRIVEPAAGQILID-GI---DISLIG---LHDLRSRLSIIPQDPVMFEG-TVRSNLDP-LE- 1345 (1496)
Q Consensus 1276 vgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ID-G~---dI~~i~---l~~LR~~i~iIpQdp~LF~g-TIR~NLdp-~~- 1345 (1496)
+||+|+||||||||+++|.|+.+|++|+|.++ |. ++...+ ...+|++++|+||++.+|.. |+++|+.. ..
T Consensus 313 ~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~ 392 (520)
T TIGR03269 313 FGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGL 392 (520)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHc
Confidence 99999999999999999999999999999996 64 344433 23567889999999988875 99999952 11
Q ss_pred CC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHH
Q 039402 1346 ES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLI 1421 (1496)
Q Consensus 1346 ~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~I 1421 (1496)
.. .++++.++++.+++.+.- .++-++. ....||||||||++|||||+.+|+||||||||++||+.+.+.+
T Consensus 393 ~~~~~~~~~~~~~~l~~~~l~~~~--~~~~~~~----~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l 466 (520)
T TIGR03269 393 ELPDELARMKAVITLKMVGFDEEK--AEEILDK----YPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDV 466 (520)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCcc--chhhhhC----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHH
Confidence 11 224567788888875310 0001122 2356999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1422 QQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1422 q~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
.+.|++..+ +.|||+|+|+++.+.. ||+|++|++|++++.|+|+++.+
T Consensus 467 ~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 467 THSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 999988643 6899999999999976 99999999999999999998864
No 64
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=8.1e-63 Score=624.59 Aligned_cols=522 Identities=19% Similarity=0.228 Sum_probs=416.2
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 297 CSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAA 376 (1496)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~ 376 (1496)
+.+++.++...++.++..++..+.|++++.++|.+..... ....+.+++++++..++..++.....+...+++.++...
T Consensus 2 ~~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (544)
T TIGR01842 2 SKNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS-VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGA 80 (544)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677888888999999999999999999997643222 122333445556666777788888888889999999999
Q ss_pred HHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 039402 377 LIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWY--IHDPWLVLFEVALSILILYKNLGIASLAALFGTVIV 454 (1496)
Q Consensus 377 L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~--~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~~~ 454 (1496)
++..+|+|.++++.. ..++..+.+++|++++.+++.. +..+...++.++..+ +++...++.+++.++++++.
T Consensus 81 lr~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~l~li~l~~~~l~ 154 (544)
T TIGR01842 81 LNQPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLL-VCFLLHPWIGILALGGAVVL 154 (544)
T ss_pred HHHHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHHHhhHHHHHHHHHHHHH
Confidence 999999999999873 2355678889999999987543 333344444433333 33333333333333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 455 MLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFWGA 534 (1496)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~ 534 (1496)
+.+.....+..++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+....
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556777778888999999999999999999999999999999999988776665554444433333332222221
Q ss_pred H--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCC
Q 039402 535 P--TFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSG 612 (1496)
Q Consensus 535 p--~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~ 612 (1496)
. ..+.++.++++.+.++.+|+|.+++++.++..+..|+..++..+..+.+++.+.+|+.++++.++..+... . ..
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~--~~ 311 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-P--LP 311 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-C--CC
Confidence 1 22345567888888999999999999999999999999999999999999999999999997654332111 1 11
Q ss_pred CCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe----------
Q 039402 613 SSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT---------- 682 (1496)
Q Consensus 613 ~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~---------- 682 (1496)
..+..++++|++|+|+. +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 312 ~~~~~i~~~~v~~~y~~-~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~ 390 (544)
T TIGR01842 312 EPEGHLSVENVTIVPPG-GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETF 390 (544)
T ss_pred CCCCeEEEEEEEEEcCC-CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHH
Confidence 12346999999999963 2468999999999999999999999999999999999999999999999983
Q ss_pred ---eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHc
Q 039402 683 ---KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 758 (1496)
Q Consensus 683 ---~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1496)
++||||+|++|++|++|||.++.+ .+++++.++++.++++++++.+|+|++|.+|++|.+||||||||++||||++
T Consensus 391 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 391 GKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 699999999999999999986654 7888899999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHh
Q 039402 759 QDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
++|+++|||||||+||+++++.+.+. +... .+++|+|++||+++.+..||+|++|++|++++.|+++++++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999988754 4444 36899999999999888899999999999999999998864
No 65
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.8e-65 Score=642.53 Aligned_cols=447 Identities=24% Similarity=0.361 Sum_probs=343.1
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 11 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYS---GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 589999999995 357999999999999999999999999999999999999999999999872
Q ss_pred eEEEccCCccCC-CcHHHHhccCCCCCH---HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHc
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKEMNR---ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 758 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~~~~---~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1496)
++|++|++.++. .|++||+.++..... ++..++++..++. .....+..+|||||||||+|||||+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQ-----------LDLDSSAGSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCC-----------ccccCChhhCCHHHHHHHHHHHHHH
Confidence 689999998765 599999998753221 2333334443332 1234667899999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcCcchHH
Q 039402 759 QDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSGTDFME 837 (1496)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~ 837 (1496)
.+|+++||||||++||+.....+.+.+.....+|+|+|++||+++++.. ||+|++|++|++++.|+++++....
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~----- 231 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD----- 231 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-----
Confidence 9999999999999999999998876544333458999999999999865 9999999999999988876543110
Q ss_pred HHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccchHHHHHHH
Q 039402 838 LVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVGFSVYWKY 917 (1496)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y 917 (1496)
... . . .. . ..
T Consensus 232 ~~~----~---~---~~-----------------------------~--~~----------------------------- 241 (510)
T PRK15439 232 IIQ----A---I---TP-----------------------------A--AR----------------------------- 241 (510)
T ss_pred HHH----H---H---hC-----------------------------c--cc-----------------------------
Confidence 000 0 0 00 0 00
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 918 ITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTA 997 (1496)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s 997 (1496)
... ...
T Consensus 242 ---------------------------------~~~----~~~------------------------------------- 247 (510)
T PRK15439 242 ---------------------------------EKS----LSA------------------------------------- 247 (510)
T ss_pred ---------------------------------ccc----ccc-------------------------------------
Confidence 000 000
Q ss_pred HHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 039402 998 TLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGS 1077 (1496)
Q Consensus 998 ~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l 1077 (1496)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 039402 1078 CIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDM 1157 (1496)
Q Consensus 1078 ~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~ 1157 (1496)
.
T Consensus 248 --------------~----------------------------------------------------------------- 248 (510)
T PRK15439 248 --------------S----------------------------------------------------------------- 248 (510)
T ss_pred --------------c-----------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCC
Q 039402 1158 LSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPN 1237 (1496)
Q Consensus 1158 l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~ 1237 (1496)
.+. .+ ..|..++ .++
T Consensus 249 ---------------------------------------------------------~~~-~~-~~~~~~~------~~~ 263 (510)
T PRK15439 249 ---------------------------------------------------------QKL-WL-ELPGNRR------QQA 263 (510)
T ss_pred ---------------------------------------------------------ccc-cc-ccccccc------ccC
Confidence 000 00 0000000 000
Q ss_pred CCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH
Q 039402 1238 DSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH 1317 (1496)
Q Consensus 1238 ~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1317 (1496)
+..-.|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+..
T Consensus 264 ---~~~~~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~ 333 (510)
T PRK15439 264 ---AGAPVLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTA 333 (510)
T ss_pred ---CCCceEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHH
Confidence 0112589999983 169999999999999999999999999999999999999999999999999877665
Q ss_pred H-HhcccEEEcccc---ccccc-chhhccCCC-----C---CC--cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCC
Q 039402 1318 D-LRSRLSIIPQDP---VMFEG-TVRSNLDPL-----E---ES--TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGEN 1382 (1496)
Q Consensus 1318 ~-LR~~i~iIpQdp---~LF~g-TIR~NLdp~-----~---~~--sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1382 (1496)
+ .|.+++|+||+| .+|.. |+++|+..+ . .. .++++.++|++.++.. ...+. ....
T Consensus 334 ~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~----~~~~ 403 (510)
T PRK15439 334 QRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKF------NHAEQ----AART 403 (510)
T ss_pred HHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCC------CCccC----cccc
Confidence 4 467899999996 36654 999998421 1 01 1123556666666531 12233 3356
Q ss_pred CCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeE
Q 039402 1383 WSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1383 LS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE 1460 (1496)
||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|+++.
T Consensus 404 LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~ 483 (510)
T PRK15439 404 LSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISG 483 (510)
T ss_pred CCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998864 47899999999999976 99999999999999
Q ss_pred ecChhhHhhc
Q 039402 1461 FDNPANLLEN 1470 (1496)
Q Consensus 1461 ~g~p~~Ll~~ 1470 (1496)
.|+++++.++
T Consensus 484 ~~~~~~~~~~ 493 (510)
T PRK15439 484 ALTGAAINVD 493 (510)
T ss_pred EEccccCCHH
Confidence 9999888643
No 66
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.6e-62 Score=621.85 Aligned_cols=541 Identities=17% Similarity=0.238 Sum_probs=427.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 294 AMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRM 373 (1496)
Q Consensus 294 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~i 373 (1496)
.+++.+++.++...++.++..++..+.|++++.++|.+...+. . ..+++.+++..++..+......+...+++.++
T Consensus 12 ~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (585)
T TIGR01192 12 SYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD--V--LPTLALWAGFGVFNTIAYVLVAREADRLAHGR 87 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788888888999999999999999999999997754321 1 11111222233445555555666778888999
Q ss_pred HHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 039402 374 RAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAALFGTV 452 (1496)
Q Consensus 374 r~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~ 452 (1496)
+..++..+|+|.++++....+++++|++++++++|++.+.+++. .+......++.+++++++++..-+..+++.+++++
T Consensus 88 ~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 167 (585)
T TIGR01192 88 RATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGI 167 (585)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987654 33334444444444444443333333344444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 453 IVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFW 532 (1496)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~ 532 (1496)
+...+...+.+..++..++..+..++..+.+.|.++|+++||.++.|+.+.+++.+..++-.+...+..........+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (585)
T TIGR01192 168 LYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNR 247 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666777777888888888899999999999999999999999988888766554333322222222222211111
Q ss_pred --HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCC
Q 039402 533 --GAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQP 610 (1496)
Q Consensus 533 --~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~ 610 (1496)
..-..+.++.+|.+.+.++.++.|.+++++.++..+..|+..+...+..+.+++.+++|+.++++.++..++.....+
T Consensus 248 ~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~ 327 (585)
T TIGR01192 248 MASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADAPE 327 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccCCC
Confidence 111233445677888889999999999999999999999999999999999999999999999876432211111001
Q ss_pred CCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------
Q 039402 611 SGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------- 682 (1496)
Q Consensus 611 ~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------- 682 (1496)
.......++++|++|+|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 328 ~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~ 405 (585)
T TIGR01192 328 LPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRE 405 (585)
T ss_pred CCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHH
Confidence 1112346999999999963 357899999999999999999999999999999999999999999999884
Q ss_pred -----eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHH
Q 039402 683 -----KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 756 (1496)
Q Consensus 683 -----~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 756 (1496)
++||+|+|+++++|++|||.++.+ .++++..++++.+++++++..+|+|.+|.+|++|.+||||||||++||||
T Consensus 406 ~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARa 485 (585)
T TIGR01192 406 SLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARA 485 (585)
T ss_pred HHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHH
Confidence 589999999999999999999864 57778888899999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchH
Q 039402 757 LYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFM 836 (1496)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~ 836 (1496)
++++|+++|||||||+||+++++.+.+ .+....+++|+|+|||+++.++.||+|++|++|++++.|++++++++++.|.
T Consensus 486 ll~~p~ililDEpts~LD~~~~~~i~~-~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~ 564 (585)
T TIGR01192 486 ILKNAPILVLDEATSALDVETEARVKN-AIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGRFY 564 (585)
T ss_pred HhcCCCEEEEECCccCCCHHHHHHHHH-HHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCChHH
Confidence 999999999999999999999988865 4555567999999999999998999999999999999999999999888888
Q ss_pred HHHHH
Q 039402 837 ELVGA 841 (1496)
Q Consensus 837 ~~~~~ 841 (1496)
++...
T Consensus 565 ~l~~~ 569 (585)
T TIGR01192 565 KLLRR 569 (585)
T ss_pred HHHHh
Confidence 87653
No 67
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.4e-65 Score=642.96 Aligned_cols=437 Identities=21% Similarity=0.319 Sum_probs=336.7
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 488999999995 357999999999999999999999999999999999999999999999872
Q ss_pred eEEEccCCccCC-CcHHHHhccCCCC-------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKEM-------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~~-------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
++|++|++.++. .|++||+.++... +.+..++.+ .+-++.+..++ .......+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~--~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEA-----DKLLARLNLRF--SSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHH-----HHHHHHcCCCC--CccCchhhCCHHHHHHHHHH
Confidence 689999987765 5999999986431 221111111 11223322221 23566789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcCc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSGT 833 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~~ 833 (1496)
|||+.+|+++||||||++||+.+...+.+.+.....+++|+|++||+++++.. ||+|++|++|+++..|+.+++..
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~--- 230 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE--- 230 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH---
Confidence 99999999999999999999999988875433333458999999999999865 99999999999987664322100
Q ss_pred chHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccchHHH
Q 039402 834 DFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVGFSV 913 (1496)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~ 913 (1496)
++
T Consensus 231 --------------------------------------------------------------------~~---------- 232 (501)
T PRK10762 231 --------------------------------------------------------------------DS---------- 232 (501)
T ss_pred --------------------------------------------------------------------HH----------
Confidence 00
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 914 YWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAG 993 (1496)
Q Consensus 914 y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~ 993 (1496)
..... +. .
T Consensus 233 ---~~~~~-----------------------------~~------~---------------------------------- 240 (501)
T PRK10762 233 ---LIEMM-----------------------------VG------R---------------------------------- 240 (501)
T ss_pred ---HHHHh-----------------------------cC------C----------------------------------
Confidence 00000 00 0
Q ss_pred HHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 039402 994 YKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVP 1073 (1496)
Q Consensus 994 ~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip 1073 (1496)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 039402 1074 AVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGL 1153 (1496)
Q Consensus 1074 ~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1153 (1496)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccC
Q 039402 1154 RLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEE 1233 (1496)
Q Consensus 1154 rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~ 1233 (1496)
+.. ..++..+
T Consensus 241 --------------------------------------------------------------~~~---~~~~~~~----- 250 (501)
T PRK10762 241 --------------------------------------------------------------KLE---DQYPRLD----- 250 (501)
T ss_pred --------------------------------------------------------------Ccc---ccccccc-----
Confidence 000 0000000
Q ss_pred CCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCC
Q 039402 1234 SRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL 1313 (1496)
Q Consensus 1234 ~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~ 1313 (1496)
++ |..-.|+++|+++ .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 251 --~~---~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~ 318 (501)
T PRK10762 251 --KA---PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVT 318 (501)
T ss_pred --cC---CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCC
Confidence 00 1112589999984 27999999999999999999999999999999999999999999999999987
Q ss_pred CCh-HHHhcccEEEcccc---cccc-cchhhccCCC-----CC----Cc----HHHHHHHHHHcCCcHHHHhccCCcccc
Q 039402 1314 IGL-HDLRSRLSIIPQDP---VMFE-GTVRSNLDPL-----EE----ST----DEQIWEALDKCQLGDEVRKKEGKLDSK 1375 (1496)
Q Consensus 1314 i~l-~~LR~~i~iIpQdp---~LF~-gTIR~NLdp~-----~~----~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~ 1375 (1496)
.+. +.+|++++|+||+| .+|. -|+++|+... .. .+ ++++.++++++++.+ +..+
T Consensus 319 ~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~-- 390 (501)
T PRK10762 319 RSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKT------PSME-- 390 (501)
T ss_pred CCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCC------CCcc--
Confidence 665 34678899999997 3554 5999999631 00 11 234666777776631 1122
Q ss_pred cccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEE
Q 039402 1376 VTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLL 1453 (1496)
Q Consensus 1376 v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL 1453 (1496)
.....||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|
T Consensus 391 --~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l 468 (501)
T PRK10762 391 --QAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVM 468 (501)
T ss_pred --CchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEE
Confidence 2345799999999999999999999999999999999999999999999864 47899999999999876 9999999
Q ss_pred eCCeEeEecChhhHh
Q 039402 1454 NHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1454 ~~G~IvE~g~p~~Ll 1468 (1496)
++|++++.|+++++.
T Consensus 469 ~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 469 HEGRISGEFTREQAT 483 (501)
T ss_pred ECCEEEEEeccccCC
Confidence 999999999988764
No 68
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-64 Score=639.03 Aligned_cols=201 Identities=16% Similarity=0.320 Sum_probs=174.2
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
..|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +.++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999964 3599999999999999999999999999999999999999999999998 3579
Q ss_pred EEEccccc--ccc-cchhhccCCCC--CCcHHHHHHHHHHcCCc-HHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1324 SIIPQDPV--MFE-GTVRSNLDPLE--ESTDEQIWEALDKCQLG-DEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1324 ~iIpQdp~--LF~-gTIR~NLdp~~--~~sd~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+|+||++. ++. .|+++|+..+. ...++++.++|+..++. +... ....+||||||||++||||+
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LSgGq~qrv~la~al 453 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIK-----------KSVKVLSGGEKGRMLFGKLM 453 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhc-----------CcccccCHHHHHHHHHHHHH
Confidence 99999984 443 59999986332 23456788889998874 3322 22357899999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEe-EecChhhHhhc
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIE-EFDNPANLLEN 1470 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~Iv-E~g~p~~Ll~~ 1470 (1496)
+++|+||||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||+|++|++|+++ ..|++.++++.
T Consensus 454 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 454 MQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 9999999999999999999999999999886 4699999999999876 9999999999998 77999988754
No 69
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3e-62 Score=661.23 Aligned_cols=216 Identities=16% Similarity=0.225 Sum_probs=188.3
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcc
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSR 1322 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1322 (1496)
...|+++|++++|+....++|+||||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++.+ ..++.|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997533469999999999999999999999999999999999999999999999999975 46678899
Q ss_pred cEEEccccccccc-chhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1323 LSIIPQDPVMFEG-TVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1323 i~iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
|||+||++.+++. |+||||..+ ...+ ++.+.++++.+++.+...+.+ ..||||||||++||
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~-----------~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLA-----------GTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999999998865 999999632 1122 233556788888876544333 46899999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|||+.+|+||+|||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.. ||||++|++|+++..|++++|.++
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999998863 57999999999999976 999999999999999999999654
No 70
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.4e-65 Score=640.29 Aligned_cols=443 Identities=22% Similarity=0.331 Sum_probs=334.6
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC--CccEEEEcCe-------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK--ISGTLKLCGT------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~--~~G~i~~~g~------------- 682 (1496)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.
T Consensus 2 l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 67899999995 35799999999999999999999999999999999999987 7999999872
Q ss_pred -eEEEccCCccCC-CcHHHHhccCCCC-------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 -KAYVAQSPWIQS-GKIEDNILFGKEM-------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 -~~yv~Q~~~i~~-~ti~eNI~~g~~~-------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++||+|++.++. .|++||+.++... +.+...+. ..+-++.+...+. .......+|||||||||+|
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~-~~~~~~~~LSgG~~qrv~i 152 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLR-----AKNLLRELQLDAD-NVTRPVGDYGGGQQQLVEI 152 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHH-----HHHHHHHcCCCCC-cccCchhhCCHHHHHHHHH
Confidence 699999997765 5999999886431 11111111 1122232222110 0123467899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
|||++.+|+++||||||++||+.+...+.+.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..|+.+++.
T Consensus 153 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~--- 229 (500)
T TIGR02633 153 AKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS--- 229 (500)
T ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC---
Confidence 999999999999999999999999998876443333458999999999999875 9999999999998654321100
Q ss_pred cchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccchHH
Q 039402 833 TDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVGFS 912 (1496)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 912 (1496)
. ++
T Consensus 230 -------------------------------------------------------~-------------~~--------- 232 (500)
T TIGR02633 230 -------------------------------------------------------E-------------DD--------- 232 (500)
T ss_pred -------------------------------------------------------H-------------HH---------
Confidence 0 00
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 913 VYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATA 992 (1496)
Q Consensus 913 ~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~ 992 (1496)
. +... . ..
T Consensus 233 ~----~~~~------------------------------~-----~~--------------------------------- 240 (500)
T TIGR02633 233 I----ITMM------------------------------V-----GR--------------------------------- 240 (500)
T ss_pred H----HHHH------------------------------h-----Cc---------------------------------
Confidence 0 0000 0 00
Q ss_pred HHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 039402 993 GYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFV 1072 (1496)
Q Consensus 993 ~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i 1072 (1496)
+
T Consensus 241 -------------------~------------------------------------------------------------ 241 (500)
T TIGR02633 241 -------------------E------------------------------------------------------------ 241 (500)
T ss_pred -------------------c------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 039402 1073 PAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLG 1152 (1496)
Q Consensus 1073 p~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~ 1152 (1496)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCcc
Q 039402 1153 LRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIE 1232 (1496)
Q Consensus 1153 ~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~ 1232 (1496)
.. + ..+.++
T Consensus 242 -------------------------~~------------------------------------~-----~~~~~~----- 250 (500)
T TIGR02633 242 -------------------------IT------------------------------------S-----LYPHEP----- 250 (500)
T ss_pred -------------------------cc------------------------------------c-----cccccc-----
Confidence 00 0 000000
Q ss_pred CCCCCCCCCCcceEEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-CccEEEECCee
Q 039402 1233 ESRPNDSWPSHGKIDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-AAGQILIDGID 1310 (1496)
Q Consensus 1233 ~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-~~G~I~IDG~d 1310 (1496)
.+ +..-.|+++|++++|..+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.+
T Consensus 251 --~~----~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~ 324 (500)
T TIGR02633 251 --HE----IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKP 324 (500)
T ss_pred --cC----CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEE
Confidence 00 011259999999999432 23599999999999999999999999999999999999995 89999999999
Q ss_pred CCCCCh-HHHhcccEEEcccc---cccc-cchhhccCCC-----CC---Cc----HHHHHHHHHHcCCcHHHHhccCCcc
Q 039402 1311 ISLIGL-HDLRSRLSIIPQDP---VMFE-GTVRSNLDPL-----EE---ST----DEQIWEALDKCQLGDEVRKKEGKLD 1373 (1496)
Q Consensus 1311 I~~i~l-~~LR~~i~iIpQdp---~LF~-gTIR~NLdp~-----~~---~s----d~eI~~aL~~~~L~~~i~~lp~gLd 1373 (1496)
+...+. ..+|++++++||++ .+|. .|+++|+... .. .. .+++.++|+++++.+. -.|
T Consensus 325 ~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~ 398 (500)
T TIGR02633 325 VDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTA------SPF 398 (500)
T ss_pred CCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCC------Ccc
Confidence 875443 56788999999997 3665 4999999641 11 11 2346667777766311 123
Q ss_pred cccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEE
Q 039402 1374 SKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVL 1451 (1496)
Q Consensus 1374 t~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIl 1451 (1496)
.+ ...||||||||++||||++++|++|||||||++||+.+.+.+.+.|++.. .+.|||+|+|+++.+.. ||+|+
T Consensus 399 ~~----~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~ 474 (500)
T TIGR02633 399 LP----IGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVL 474 (500)
T ss_pred Cc----cccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEE
Confidence 33 34699999999999999999999999999999999999999999998754 47899999999999976 99999
Q ss_pred EEeCCeEeEecChhhH
Q 039402 1452 LLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1452 VL~~G~IvE~g~p~~L 1467 (1496)
+|++|+++..++..++
T Consensus 475 ~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 475 VIGEGKLKGDFVNHAL 490 (500)
T ss_pred EEECCEEEEEEccccC
Confidence 9999999988766554
No 71
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-65 Score=636.51 Aligned_cols=439 Identities=23% Similarity=0.324 Sum_probs=334.9
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--------------~ 682 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFP---GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEEC---CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 588999999995 35799999999999999999999999999999999999999999999976 2
Q ss_pred eEEEccCCccCC-CcHHHHhccCCC------CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHH
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKE------MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 755 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~------~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 755 (1496)
++|++|++.++. .|++||+.++.. .+....++. ..+.++.+... ........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~--~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYE-----AREQLEHLGVD--IDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHH-----HHHHHHHcCCC--CCcCCchhhCCHHHHHHHHHHH
Confidence 689999998776 499999998631 122111111 11222332221 1234667899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcCcc
Q 039402 756 ALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSGTD 834 (1496)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~~~ 834 (1496)
|++.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..++..+
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~------- 226 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMA------- 226 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccc-------
Confidence 9999999999999999999999998876544433458999999999999865 99999999999975432100
Q ss_pred hHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccchHHHH
Q 039402 835 FMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVGFSVY 914 (1496)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 914 (1496)
. . .. ++
T Consensus 227 ----------------------------------------------~--~--~~-------------~~----------- 232 (501)
T PRK11288 227 ----------------------------------------------Q--V--DR-------------DQ----------- 232 (501)
T ss_pred ----------------------------------------------c--C--CH-------------HH-----------
Confidence 0 0 00 00
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 915 WKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGY 994 (1496)
Q Consensus 915 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~ 994 (1496)
+... .. ..+
T Consensus 233 --~~~~------------------------------~~-----~~~---------------------------------- 241 (501)
T PRK11288 233 --LVQA------------------------------MV-----GRE---------------------------------- 241 (501)
T ss_pred --HHHH------------------------------hc-----CCC----------------------------------
Confidence 0000 00 000
Q ss_pred HHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 039402 995 KTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPA 1074 (1496)
Q Consensus 995 ~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~ 1074 (1496)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 039402 1075 VGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLR 1154 (1496)
Q Consensus 1075 ~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~r 1154 (1496)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCC
Q 039402 1155 LDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEES 1234 (1496)
Q Consensus 1155 l~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~ 1234 (1496)
. ++. .+.++.
T Consensus 242 -----------------------~------------------------------------~~~-----~~~~~~------ 251 (501)
T PRK11288 242 -----------------------I------------------------------------GDI-----YGYRPR------ 251 (501)
T ss_pred -----------------------c------------------------------------ccc-----cccccc------
Confidence 0 000 000000
Q ss_pred CCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCC
Q 039402 1235 RPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI 1314 (1496)
Q Consensus 1235 ~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i 1314 (1496)
+ +....++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 252 -~----~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~ 320 (501)
T PRK11288 252 -P----LGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIR 320 (501)
T ss_pred -C----CCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCC
Confidence 0 01125899999842 389999999999999999999999999999999999999999999999998754
Q ss_pred Ch-HHHhcccEEEccccc---ccc-cchhhccCCCC--C-------C-c---HHHHHHHHHHcCCcHHHHhccCCccccc
Q 039402 1315 GL-HDLRSRLSIIPQDPV---MFE-GTVRSNLDPLE--E-------S-T---DEQIWEALDKCQLGDEVRKKEGKLDSKV 1376 (1496)
Q Consensus 1315 ~l-~~LR~~i~iIpQdp~---LF~-gTIR~NLdp~~--~-------~-s---d~eI~~aL~~~~L~~~i~~lp~gLdt~v 1376 (1496)
.. +..|++++++||+|. +|. .|+.+|+.... . . . ++++.+.|+.+++.+ +..+.+
T Consensus 321 ~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~- 393 (501)
T PRK11288 321 SPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKT------PSREQL- 393 (501)
T ss_pred CHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCccc------CCccCc-
Confidence 43 456789999999983 554 69999986311 0 0 1 234666777776621 112333
Q ss_pred ccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEe
Q 039402 1377 TENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLN 1454 (1496)
Q Consensus 1377 ~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~ 1454 (1496)
..+||||||||++||||++.+|++|||||||++||..+.+.+.+.|++.. .+.|||+|+|+++.+.. ||+|++|+
T Consensus 394 ---~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~ 470 (501)
T PRK11288 394 ---IMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMR 470 (501)
T ss_pred ---cccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEE
Confidence 35799999999999999999999999999999999999999999998764 37899999999999976 99999999
Q ss_pred CCeEeEecChhhHh
Q 039402 1455 HGLIEEFDNPANLL 1468 (1496)
Q Consensus 1455 ~G~IvE~g~p~~Ll 1468 (1496)
+|++++.|++++..
T Consensus 471 ~g~i~~~~~~~~~~ 484 (501)
T PRK11288 471 EGRIAGELAREQAT 484 (501)
T ss_pred CCEEEEEEccccCC
Confidence 99999999998765
No 72
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8.3e-62 Score=614.47 Aligned_cols=511 Identities=22% Similarity=0.271 Sum_probs=403.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 299 VWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLN-GRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAAL 377 (1496)
Q Consensus 299 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~-~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L 377 (1496)
+|+.++...++.++..++..+.|++++.++|.+. .... ....+.+++.+++..++..++.....+...+++.++...+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (529)
T TIGR02857 1 ARRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQL 79 (529)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778888999999999999999999999873 3221 1222333444555556677777777888889999999999
Q ss_pred HHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 039402 378 IAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAALFGTVIVML 456 (1496)
Q Consensus 378 ~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~~~~~~ 456 (1496)
+..+|+|.++++....++.++|+++|++++|++.+.+++. .+..+....+.+++++++++....+.+++.++.+++...
T Consensus 80 r~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 80 RERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998754 355555555555544444443333333333333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 457 VNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFWGAPT 536 (1496)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~ 536 (1496)
+...+.+..++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++.+..++..+...+..........+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777788888999999999999999999999999999998888765444333332222222222222111111
Q ss_pred H--HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCC
Q 039402 537 F--VSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSGSS 614 (1496)
Q Consensus 537 ~--v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~ 614 (1496)
+ +.++.++++.+..+.++.|.+++++.+...+..|+..+...+..+.+++++++|+.++++.++.+.+.. ..+. ..
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~-~~~~-~~ 317 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA-PVTA-AP 317 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc-CCCC-CC
Confidence 1 122234455556788999999999999999999999999999999999999999999997543221111 1111 11
Q ss_pred CccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 615 ETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
...++++|++|+|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 318 ~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 2469999999999732 358999999999999999999999999999999999999999999999984
Q ss_pred -eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC
Q 039402 683 -KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 760 (1496)
Q Consensus 683 -~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1496)
++||+|+|++|++||+|||.++.+ .++++..++++.++++++++.+|+|.+|.+||+|.+||||||||++||||++++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 699999999999999999999865 678889999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEE
Q 039402 761 SDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVM 814 (1496)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l 814 (1496)
|+++|||||||+||+++++.+++. +....+++|+|+|||+++.+..||+|++|
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEA-LRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHH-HHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999754 45556799999999999999999999986
No 73
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-64 Score=630.85 Aligned_cols=436 Identities=22% Similarity=0.331 Sum_probs=330.5
Q ss_pred EeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------eEEE
Q 039402 621 VDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------KAYV 686 (1496)
Q Consensus 621 ~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------~~yv 686 (1496)
+|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+ ++|+
T Consensus 2 ~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 2 SNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 57788885 357999999999999999999999999999999999999999999999873 6899
Q ss_pred ccCCccC-CCcHHHHhccCCC------CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHcc
Q 039402 687 AQSPWIQ-SGKIEDNILFGKE------MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQ 759 (1496)
Q Consensus 687 ~Q~~~i~-~~ti~eNI~~g~~------~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~ 759 (1496)
+|++.++ +.|++||+.++.. .+.++..+. ..+-++.+ |......+...+|||||||||+||||++.
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRD-----TKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHH-----HHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHh
Confidence 9999765 4599999988642 122211111 11122322 22223456778999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcCcchHHH
Q 039402 760 DSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSGTDFMEL 838 (1496)
Q Consensus 760 ~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~ 838 (1496)
+|+++||||||++||+.+...+.+.+.....+|+|+|++||+++++.. ||+|++|++|++++.|+.+++..
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~-------- 223 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM-------- 223 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH--------
Confidence 999999999999999999998876543333458999999999999865 99999999999988765422100
Q ss_pred HHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccchHHHHHHHH
Q 039402 839 VGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVGFSVYWKYI 918 (1496)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 918 (1496)
. +. .
T Consensus 224 -------------------------------------------------~-------------~~--------------~ 227 (491)
T PRK10982 224 -------------------------------------------------D-------------KI--------------I 227 (491)
T ss_pred -------------------------------------------------H-------------HH--------------H
Confidence 0 00 0
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 919 TTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAGYKTAT 998 (1496)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~ 998 (1496)
... . ..
T Consensus 228 ~~~------------------------------~-----~~--------------------------------------- 233 (491)
T PRK10982 228 AMM------------------------------V-----GR--------------------------------------- 233 (491)
T ss_pred HHH------------------------------h-----CC---------------------------------------
Confidence 000 0 00
Q ss_pred HHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 039402 999 LLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVPAVGSC 1078 (1496)
Q Consensus 999 ~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~ 1078 (1496)
+
T Consensus 234 -------------~------------------------------------------------------------------ 234 (491)
T PRK10982 234 -------------S------------------------------------------------------------------ 234 (491)
T ss_pred -------------C------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 039402 1079 IWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDML 1158 (1496)
Q Consensus 1079 ~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l 1158 (1496)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCC
Q 039402 1159 SSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPND 1238 (1496)
Q Consensus 1159 ~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~ 1238 (1496)
+ .+ ..+.++ .+
T Consensus 235 ----------------------------------------------------~---~~-----~~~~~~-------~~-- 245 (491)
T PRK10982 235 ----------------------------------------------------L---TQ-----RFPDKE-------NK-- 245 (491)
T ss_pred ----------------------------------------------------c---cc-----cccccc-------CC--
Confidence 0 00 000000 00
Q ss_pred CCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH
Q 039402 1239 SWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD 1318 (1496)
Q Consensus 1239 ~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~ 1318 (1496)
|....|+++|++++| +.+|+|+||+|++||++||+|+||||||||+++|+|+.+|++|+|.+||.++...+..+
T Consensus 246 --~~~~~i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 319 (491)
T PRK10982 246 --PGEVILEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANE 319 (491)
T ss_pred --CCCcEEEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHH
Confidence 111259999999985 24899999999999999999999999999999999999999999999999998776544
Q ss_pred -HhcccEEEccccc---ccc-cchhhc-----cCCC----CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 039402 1319 -LRSRLSIIPQDPV---MFE-GTVRSN-----LDPL----EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1380 (1496)
Q Consensus 1319 -LR~~i~iIpQdp~---LF~-gTIR~N-----Ldp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1380 (1496)
+|+.++++||++. +|. .|+++| +... +..+ ++++.+.++..++.+ +.+|. ..
T Consensus 320 ~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~----~~ 389 (491)
T PRK10982 320 AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKT------PGHRT----QI 389 (491)
T ss_pred HHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccC------CCccc----cc
Confidence 5778999999963 565 377666 3211 1111 223455555555421 11233 34
Q ss_pred CCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeE
Q 039402 1381 ENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLI 1458 (1496)
Q Consensus 1381 ~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~I 1458 (1496)
..||||||||++||||++++|+||||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||||++|++|++
T Consensus 390 ~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i 469 (491)
T PRK10982 390 GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLV 469 (491)
T ss_pred ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEE
Confidence 5799999999999999999999999999999999999999999997753 47899999999999976 999999999999
Q ss_pred eEecChhhHh
Q 039402 1459 EEFDNPANLL 1468 (1496)
Q Consensus 1459 vE~g~p~~Ll 1468 (1496)
+..++++++.
T Consensus 470 ~~~~~~~~~~ 479 (491)
T PRK10982 470 AGIVDTKTTT 479 (491)
T ss_pred EEEEccccCC
Confidence 9888776544
No 74
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3e-64 Score=630.23 Aligned_cols=440 Identities=20% Similarity=0.282 Sum_probs=334.7
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLS---DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcC---CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 378999999995 346999999999999999999999999999999999999999999998762 5
Q ss_pred EEEccCCcc---------CCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 684 AYVAQSPWI---------QSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 684 ~yv~Q~~~i---------~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+|++|++.. +..|++||+.++.. ++++..++++..++.+ ..+....+||||||||++||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITA-----------LLDRRFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHh-----------hhhCCcccCCHHHHHHHHHH
Confidence 899998643 14589999876532 2344455555555432 22456789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcCc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSGT 833 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~~ 833 (1496)
||++.+|+++||||||++||+...+.+.+.+.+...+|+|+|++||+++.+.. ||+|++|++|+++..|+++++.....
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 227 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQAL 227 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcchh
Confidence 99999999999999999999999998876544433458999999999999865 99999999999999887665432100
Q ss_pred chHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccchHHH
Q 039402 834 DFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVGFSV 913 (1496)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~ 913 (1496)
... .. .. +
T Consensus 228 -~~~-------------------------------------------~~----~~-------------~----------- 235 (490)
T PRK10938 228 -VAQ-------------------------------------------LA----HS-------------E----------- 235 (490)
T ss_pred -hhh-------------------------------------------hh----hh-------------h-----------
Confidence 000 00 00 0
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 914 YWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLATAG 993 (1496)
Q Consensus 914 y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~~~ 993 (1496)
. +... ..+
T Consensus 236 ------~------------------------------~~~~---~~~--------------------------------- 243 (490)
T PRK10938 236 ------Q------------------------------LEGV---QLP--------------------------------- 243 (490)
T ss_pred ------c------------------------------cCcc---ccC---------------------------------
Confidence 0 0000 000
Q ss_pred HHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 039402 994 YKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVFVP 1073 (1496)
Q Consensus 994 ~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ip 1073 (1496)
T Consensus 244 -------------------------------------------------------------------------------- 243 (490)
T PRK10938 244 -------------------------------------------------------------------------------- 243 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 039402 1074 AVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGL 1153 (1496)
Q Consensus 1074 ~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1153 (1496)
T Consensus 244 -------------------------------------------------------------------------------- 243 (490)
T PRK10938 244 -------------------------------------------------------------------------------- 243 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccC
Q 039402 1154 RLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAIEE 1233 (1496)
Q Consensus 1154 rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~ 1233 (1496)
. ..++.. +.
T Consensus 244 ---------------------~------------------------------------------------~~~~~~--~~ 252 (490)
T PRK10938 244 ---------------------E------------------------------------------------PDEPSA--RH 252 (490)
T ss_pred ---------------------c------------------------------------------------cccccc--cc
Confidence 0 000000 00
Q ss_pred CCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-CccEEEECCeeCC
Q 039402 1234 SRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-AAGQILIDGIDIS 1312 (1496)
Q Consensus 1234 ~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-~~G~I~IDG~dI~ 1312 (1496)
..+ +....|+++|++++|.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 253 -~~~---~~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~ 326 (490)
T PRK10938 253 -ALP---ANEPRIVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRG 326 (490)
T ss_pred -ccC---CCCceEEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCC
Confidence 000 01225999999999964 3599999999999999999999999999999999998875 6999999998764
Q ss_pred C-CChHHHhcccEEEcccccccc---cchhhccCC-C-------CCCc---HHHHHHHHHHcCCcH-HHHhccCCccccc
Q 039402 1313 L-IGLHDLRSRLSIIPQDPVMFE---GTVRSNLDP-L-------EEST---DEQIWEALDKCQLGD-EVRKKEGKLDSKV 1376 (1496)
Q Consensus 1313 ~-i~l~~LR~~i~iIpQdp~LF~---gTIR~NLdp-~-------~~~s---d~eI~~aL~~~~L~~-~i~~lp~gLdt~v 1376 (1496)
. ......|++++++||++.++. -|+++++.. + .... ++++.++++.+++.+ ... .
T Consensus 327 ~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~-- 397 (490)
T PRK10938 327 SGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTAD-------A-- 397 (490)
T ss_pred CCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhcc-------C--
Confidence 2 234457889999999987643 477777642 1 1111 245677888888754 322 2
Q ss_pred ccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC-C-cEEEEEccCcchhcc--cCEEEE
Q 039402 1377 TENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS-D-CTVLTIAHRITSVID--SDLVLL 1452 (1496)
Q Consensus 1377 ~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~-~-~TVI~IAHRl~ti~~--~DrIlV 1452 (1496)
....||||||||++|||||+++|+||+|||||++||+.+...+.+.|++..+ + +|||+|+|+++.+.. ||+|++
T Consensus 398 --~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~ 475 (490)
T PRK10938 398 --PFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEF 475 (490)
T ss_pred --chhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEE
Confidence 2356999999999999999999999999999999999999999999998653 3 479999999999975 799999
Q ss_pred EeCCeEeEecC
Q 039402 1453 LNHGLIEEFDN 1463 (1496)
Q Consensus 1453 L~~G~IvE~g~ 1463 (1496)
|++|+|++.-+
T Consensus 476 l~~G~i~~~~~ 486 (490)
T PRK10938 476 VPDGDIYRYVQ 486 (490)
T ss_pred ecCCceEEeec
Confidence 99999988643
No 75
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.7e-62 Score=671.71 Aligned_cols=474 Identities=19% Similarity=0.225 Sum_probs=373.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 039402 990 ATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFI 1069 (1496)
Q Consensus 990 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1069 (1496)
...+.+....+...+++++++.|..+++...+|+++||+++|++.++... ..+..+....+.++..++++...-.+..+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l 444 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASL 444 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 46677777888889999999999999999999999999999999999875 34444444444444443333221001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 039402 1070 VFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAME 1149 (1496)
Q Consensus 1070 ~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1149 (1496)
+.++++++++.+..++.+..+..++.....+....+.+.|.++|+++||+|++|+.|.+++.+..+...+..........
T Consensus 445 ~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~ 524 (1495)
T PLN03232 445 FGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSA 524 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112222222333444445555555566677788999999999999999999999999998877766655444433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCC
Q 039402 1150 WLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPL 1229 (1496)
Q Consensus 1150 wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1229 (1496)
+..+.......+ +.+..+.......|.+++|.+-.++++...+...+..+...+..+.+..+|.+|+.++++.+++.+.
T Consensus 525 ~~~~~~~~~~~~-~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~ 603 (1495)
T PLN03232 525 FNSFILNSIPVV-VTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILA 603 (1495)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 332221111111 1111112222346789999999999999999988998999999999999999999999986654221
Q ss_pred CccCCCCCCCCCCcceEEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC
Q 039402 1230 AIEESRPNDSWPSHGKIDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG 1308 (1496)
Q Consensus 1230 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1308 (1496)
. .++ ..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 604 ~----~~~-~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~--- 675 (1495)
T PLN03232 604 Q----NPP-LQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV--- 675 (1495)
T ss_pred c----cCC-cCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE---
Confidence 1 111 11234679999999999753 35799999999999999999999999999999999999999998763
Q ss_pred eeCCCCChHHHhcccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1309 IDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1309 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
.+|++|+||||+|.||+|||||||....++++++++++++.|++.+.++.+|+|+||.|||+|.|||||||
T Consensus 676 ---------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQk 746 (1495)
T PLN03232 676 ---------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQK 746 (1495)
T ss_pred ---------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHH
Confidence 46889999999999999999999998778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHH-HHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhH
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLI-QQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~I-q~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
||++||||++++|+|++||||||+||++|++.| ++.++...+++|+|+||||++++..||+|++|++|+|+|.|+|++|
T Consensus 747 QRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL 826 (1495)
T PLN03232 747 QRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAEL 826 (1495)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHH
Confidence 999999999999999999999999999999877 5567777789999999999999999999999999999999999999
Q ss_pred hhcCCcHHHHHHHHHh
Q 039402 1468 LENKSSSFSQLVAEYT 1483 (1496)
Q Consensus 1468 l~~~~s~F~~l~~~~~ 1483 (1496)
++ +++.|++++++..
T Consensus 827 ~~-~~~~~~~l~~~~~ 841 (1495)
T PLN03232 827 SK-SGSLFKKLMENAG 841 (1495)
T ss_pred Hh-cchhHHHHHHhcc
Confidence 96 4688999987654
No 76
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-61 Score=613.53 Aligned_cols=467 Identities=18% Similarity=0.223 Sum_probs=365.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHH
Q 039402 974 LAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRI 1053 (1496)
Q Consensus 974 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~ 1053 (1496)
+.++..++.+++.++....+.+...+++.++++++++.|++||+..++|++++|+++|++.+...+. .+..++..++.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~ 135 (547)
T PRK10522 57 LLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILT 135 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHH
Confidence 3334455667788888899999999999999999999999999999999999999999999987654 466777888888
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccH---HHHHHHH
Q 039402 1054 LGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQE---SRFRDRN 1130 (1496)
Q Consensus 1054 l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~---~~f~~~~ 1130 (1496)
++.++++++++|+++++++..+++.+++..++.+..+...+......+...+++.|.++|+.+++ ++.+ +++.+++
T Consensus 136 i~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~ 214 (547)
T PRK10522 136 LGSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEY 214 (547)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHH
Confidence 88888999999999887776666655555555555555555556677889999999999999996 4433 4566666
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1131 MKLMDEYSRPTFHIAAAMEWLGLRLDMLSSIT-FAFTLVFLISI-PKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLE 1208 (1496)
Q Consensus 1131 ~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~-~~~~~~~~~~~-~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le 1208 (1496)
.+..+...+....... +......+..+. ..+.+++++.. ..+..+.+.+++...+.+.+...+..+...+.++.
T Consensus 215 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~ 290 (547)
T PRK10522 215 EPDAQEYRHHIIRADT----FHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLL 290 (547)
T ss_pred hHHHHHHHhhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655544333221 111111111111 11111111111 11112333444444444556677888888889999
Q ss_pred HhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHH
Q 039402 1209 NKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKST 1288 (1496)
Q Consensus 1209 ~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKST 1288 (1496)
....+.+|+.++.+.|.|++. +...+. |..+.|+++||+|+|+++ +++|+|+||+|+|||++||||+|||||||
T Consensus 291 ~~~~a~~ri~~l~~~~~~~~~--~~~~~~---~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKST 364 (547)
T PRK10522 291 SAQVAFNKLNKLALAPYKAEF--PRPQAF---PDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKST 364 (547)
T ss_pred HHHHHHHHHHHHhcccccccc--cccccc---CcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHH
Confidence 999999999998765543321 111111 223689999999999743 46999999999999999999999999999
Q ss_pred HHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhc
Q 039402 1289 LIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKK 1368 (1496)
Q Consensus 1289 Ll~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~l 1368 (1496)
|+++|+|+++|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ..+.+|++++++++++++.+.+..
T Consensus 365 L~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~- 440 (547)
T PRK10522 365 LAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL- 440 (547)
T ss_pred HHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-
Confidence 9999999999999999999999999999999999999999999999999999 246788999999999999877653
Q ss_pred cCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc
Q 039402 1369 EGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID 1446 (1496)
Q Consensus 1369 p~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~ 1446 (1496)
++|. .+|.+||||||||++||||++++|+|||||||||+||++|++.|.+.+.+.. +++|+|+||||++++..
T Consensus 441 ~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~ 515 (547)
T PRK10522 441 EDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIH 515 (547)
T ss_pred cccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHh
Confidence 4442 2588999999999999999999999999999999999999999999998665 47999999999999999
Q ss_pred cCEEEEEeCCeEeEe
Q 039402 1447 SDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1447 ~DrIlVL~~G~IvE~ 1461 (1496)
||+|++|++|+++|.
T Consensus 516 ~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 516 ADRLLEMRNGQLSEL 530 (547)
T ss_pred CCEEEEEECCEEEEe
Confidence 999999999999998
No 77
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-61 Score=667.31 Aligned_cols=473 Identities=18% Similarity=0.215 Sum_probs=375.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 039402 990 ATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFI 1069 (1496)
Q Consensus 990 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1069 (1496)
...+.+....+...+++++++.|..+++...+|+++|++++|++.++.... .+..+....+.++..++++...-.+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777777888899999999999999999999999999999999998863 3455555555555444443332111122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 039402 1070 VFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAME 1149 (1496)
Q Consensus 1070 ~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1149 (1496)
+.++++++.+.++.++.+..+..++.....+....+.+.|.++|+.+||+|++|+.|.+++.+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233333444444445555666666777888999999999999999999999999998877665544333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCC
Q 039402 1150 WLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPL 1229 (1496)
Q Consensus 1150 wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1229 (1496)
+..+....... .+.+..+.......|.++++.+..++++...+..++..+...+..+.+..+|.+|+.+|++.+++.+.
T Consensus 525 ~~~~~~~~~~~-~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~ 603 (1622)
T PLN03130 525 FNSFILNSIPV-LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLL 603 (1622)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 22222111111 11111112223347889999988888888888888888889999999999999999999976543211
Q ss_pred CccCCCCCCCCCCcceEEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCc-cEEEEC
Q 039402 1230 AIEESRPNDSWPSHGKIDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAA-GQILID 1307 (1496)
Q Consensus 1230 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~-G~I~ID 1307 (1496)
. .++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++ |+|.+
T Consensus 604 ~----~~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l- 677 (1622)
T PLN03130 604 P----NPP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI- 677 (1622)
T ss_pred c----CCc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-
Confidence 0 111 11224579999999999753 3579999999999999999999999999999999999999999 99973
Q ss_pred CeeCCCCChHHHhcccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1308 GIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1308 G~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
|.+|+||||+|.+|+|||||||....+++++++++|++.|+|.+.++.+|+|+||.|||+|.||||||
T Consensus 678 ------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQ 745 (1622)
T PLN03130 678 ------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQ 745 (1622)
T ss_pred ------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHH
Confidence 67899999999999999999999887889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHH-HHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhh
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLI-QQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~I-q~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
|||++||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|.|+|++
T Consensus 746 KQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~e 825 (1622)
T PLN03130 746 KQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEE 825 (1622)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999876 567887778999999999999999999999999999999999999
Q ss_pred HhhcCCcHHHHHHHHHh
Q 039402 1467 LLENKSSSFSQLVAEYT 1483 (1496)
Q Consensus 1467 Ll~~~~s~F~~l~~~~~ 1483 (1496)
|++ +++.|++++++..
T Consensus 826 L~~-~~~~~~~l~~~~~ 841 (1622)
T PLN03130 826 LSN-NGPLFQKLMENAG 841 (1622)
T ss_pred HHh-cchhHHHHHHhcc
Confidence 996 4688999987654
No 78
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.6e-62 Score=621.58 Aligned_cols=481 Identities=22% Similarity=0.322 Sum_probs=336.1
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--eeEEEccCCccCC
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS 694 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--~~~yv~Q~~~i~~ 694 (1496)
.++++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++||+|+|++++
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 83 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLDP 83 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCC
Confidence 5899999999952 36799999999999999999999999999999999999999999999864 6899999999875
Q ss_pred C-cHHHHhccCCC-CC----------------HH-------HHHHHHHHh----------chhhHHHhccCCCcccccCC
Q 039402 695 G-KIEDNILFGKE-MN----------------RE-------RYNAVLDAC----------SLKKDLEILSFGDQTVIGER 739 (1496)
Q Consensus 695 ~-ti~eNI~~g~~-~~----------------~~-------~~~~v~~~~----------~l~~d~~~l~~g~~t~ig~~ 739 (1496)
. |++||+.++.. +. .+ ++.++.+.+ .+.+.++.+... ....+
T Consensus 84 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~~ 160 (556)
T PRK11819 84 EKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP---PWDAK 160 (556)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC---cccCc
Confidence 4 99999987631 00 00 000000000 011122222221 23567
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCe
Q 039402 740 GINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGK 818 (1496)
Q Consensus 740 g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 818 (1496)
..+|||||||||+||||++.+|+++|||||||+||+.+..++.+ ++... +.|+|+|||+++++.. ||+|++|++|+
T Consensus 161 ~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~-~L~~~--~~tviiisHd~~~~~~~~d~i~~l~~g~ 237 (556)
T PRK11819 161 VTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQ-FLHDY--PGTVVAVTHDRYFLDNVAGWILELDRGR 237 (556)
T ss_pred hhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEeCCE
Confidence 78999999999999999999999999999999999999888864 45443 3599999999999876 99999999999
Q ss_pred EE-EecChHHHHhcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccc
Q 039402 819 IT-QAGKYNDLINSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQ 897 (1496)
Q Consensus 819 i~-~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (1496)
++ +.|+++++.+... ...... ..
T Consensus 238 i~~~~g~~~~~~~~~~-------~~~~~~-----------------------------------------~~-------- 261 (556)
T PRK11819 238 GIPWEGNYSSWLEQKA-------KRLAQE-----------------------------------------EK-------- 261 (556)
T ss_pred EEEecCCHHHHHHHHH-------HHHHHH-----------------------------------------HH--------
Confidence 86 7888877643210 000000 00
Q ss_pred hhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHH
Q 039402 898 LVQEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVG 977 (1496)
Q Consensus 898 ~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~ 977 (1496)
..+..++ .++... -|..
T Consensus 262 --~~~~~~~----------~~~~~~-----------------------~~~~---------------------------- 278 (556)
T PRK11819 262 --QEAARQK----------ALKREL-----------------------EWVR---------------------------- 278 (556)
T ss_pred --HHHHHHH----------HHHHHH-----------------------HHHH----------------------------
Confidence 0000000 000000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 039402 978 SSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTI 1057 (1496)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~ 1057 (1496)
T Consensus 279 -------------------------------------------------------------------------------- 278 (556)
T PRK11819 279 -------------------------------------------------------------------------------- 278 (556)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHH
Q 039402 1058 AVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEY 1137 (1496)
Q Consensus 1058 ~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~ 1137 (1496)
+ ++.. + .. +
T Consensus 279 ------------------------------------~------~~~~-------------~----~~----~-------- 287 (556)
T PRK11819 279 ------------------------------------Q------SPKA-------------R----QA----K-------- 287 (556)
T ss_pred ------------------------------------H------hhhh-------------h----HH----H--------
Confidence 0 0000 0 00 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHH
Q 039402 1138 SRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERI 1217 (1496)
Q Consensus 1138 ~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi 1217 (1496)
.+......+|.
T Consensus 288 ---------------------------------------------------------------------~~~~~~~~~~~ 298 (556)
T PRK11819 288 ---------------------------------------------------------------------SKARLARYEEL 298 (556)
T ss_pred ---------------------------------------------------------------------HHHHHHHHHHh
Confidence 00000000111
Q ss_pred HHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 039402 1218 FQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIV 1297 (1496)
Q Consensus 1218 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ 1297 (1496)
.+. .+.+++.......++...+....|+++||+++|.+. .+|+|+||+|++||++||+|+||||||||+++|.|+.
T Consensus 299 ~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~ 374 (556)
T PRK11819 299 LSE--EYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGDR--LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQE 374 (556)
T ss_pred hcc--cccccCCCceeecCCCCCCCCeEEEEEeEEEEECCe--eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 000 000000000000011111223469999999999643 5999999999999999999999999999999999999
Q ss_pred CCCccEEEECCeeCCCCChHHHhcccEEEcccc-cccc-cchhhccCCCC---C--CcHHHHHHHHHHcCCcHHHHhccC
Q 039402 1298 EPAAGQILIDGIDISLIGLHDLRSRLSIIPQDP-VMFE-GTVRSNLDPLE---E--STDEQIWEALDKCQLGDEVRKKEG 1370 (1496)
Q Consensus 1298 ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~-gTIR~NLdp~~---~--~sd~eI~~aL~~~~L~~~i~~lp~ 1370 (1496)
+|++|+|.+++ + .+++|+||++ .++. -|+++|+.... . ..+++..++++..++.+..
T Consensus 375 ~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----- 438 (556)
T PRK11819 375 QPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGD----- 438 (556)
T ss_pred CCCCeEEEECC-c----------eEEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhH-----
Confidence 99999999964 2 1699999997 5665 49999986321 1 1234455677777764211
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCE
Q 039402 1371 KLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDL 1449 (1496)
Q Consensus 1371 gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~Dr 1449 (1496)
++. ....||||||||++||||++.+|++|||||||++||+.+...+.+.|++. + .|||+|||+++.+.. ||+
T Consensus 439 -~~~----~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~ 511 (556)
T PRK11819 439 -QQK----KVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATH 511 (556)
T ss_pred -hcC----chhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCE
Confidence 122 23469999999999999999999999999999999999999999999875 4 489999999999876 999
Q ss_pred EEEEeC-CeEeE-ecChhhHhhcC
Q 039402 1450 VLLLNH-GLIEE-FDNPANLLENK 1471 (1496)
Q Consensus 1450 IlVL~~-G~IvE-~g~p~~Ll~~~ 1471 (1496)
|++|++ |++.+ .|+++++++++
T Consensus 512 i~~l~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 512 ILAFEGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred EEEEECCCeEEEecCCHHHHHHHH
Confidence 999996 88875 67888887653
No 79
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.8e-62 Score=619.30 Aligned_cols=479 Identities=22% Similarity=0.317 Sum_probs=335.5
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--eeEEEccCCccCC
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS 694 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--~~~yv~Q~~~i~~ 694 (1496)
.++++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++||+|+|+++.
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 81 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDP 81 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCC
Confidence 5889999999951 35799999999999999999999999999999999999999999999974 6899999999875
Q ss_pred -CcHHHHhccCCCC------------------CH---------HHHHHHHHHhchh-------hHHHhccCCCcccccCC
Q 039402 695 -GKIEDNILFGKEM------------------NR---------ERYNAVLDACSLK-------KDLEILSFGDQTVIGER 739 (1496)
Q Consensus 695 -~ti~eNI~~g~~~------------------~~---------~~~~~v~~~~~l~-------~d~~~l~~g~~t~ig~~ 739 (1496)
.|++|||.++... ++ +++.++++.++.. +-++.+.. . .....
T Consensus 82 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~-~~~~~ 158 (552)
T TIGR03719 82 TKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRC--P-PWDAD 158 (552)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCC--C-cccCc
Confidence 5999999875310 01 1223333444322 11222222 1 13567
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCe
Q 039402 740 GINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGK 818 (1496)
Q Consensus 740 g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 818 (1496)
..+|||||||||+||||++.+|+++||||||++||+++..++.+ .+... ++|+|+|||+++++.. ||++++|++|+
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~-~L~~~--~~tvIiisHd~~~~~~~~d~v~~l~~g~ 235 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQ-HLQEY--PGTVVAVTHDRYFLDNVAGWILELDRGR 235 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEECCE
Confidence 78999999999999999999999999999999999999988865 44433 4699999999999876 99999999999
Q ss_pred EE-EecChHHHHhcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccc
Q 039402 819 IT-QAGKYNDLINSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQ 897 (1496)
Q Consensus 819 i~-~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (1496)
++ ..|+++++.+... ...+.. ....
T Consensus 236 i~~~~g~~~~~~~~~~-------~~~~~~-----------------------------------------~~~~------ 261 (552)
T TIGR03719 236 GIPWEGNYSSWLEQKE-------KRLEQE-----------------------------------------EKEE------ 261 (552)
T ss_pred EEEecCCHHHHHHHHH-------HHHHHH-----------------------------------------HHHH------
Confidence 76 7798887653210 000000 0000
Q ss_pred hhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHH
Q 039402 898 LVQEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVG 977 (1496)
Q Consensus 898 ~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~ 977 (1496)
+..++ .+.... .|+.
T Consensus 262 --~~~~~------------~~~~~~-----------------------~~~~---------------------------- 276 (552)
T TIGR03719 262 --SARQK------------ALKREL-----------------------EWVR---------------------------- 276 (552)
T ss_pred --HHHHH------------HHHHHH-----------------------HHHH----------------------------
Confidence 00000 000000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 039402 978 SSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTI 1057 (1496)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~ 1057 (1496)
T Consensus 277 -------------------------------------------------------------------------------- 276 (552)
T TIGR03719 277 -------------------------------------------------------------------------------- 276 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHH
Q 039402 1058 AVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEY 1137 (1496)
Q Consensus 1058 ~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~ 1137 (1496)
+ .+.. . ++ +.
T Consensus 277 ------------------------------------~------~~~~---~---------~~---------~~------- 286 (552)
T TIGR03719 277 ------------------------------------S------SPKA---R---------QA---------KS------- 286 (552)
T ss_pred ------------------------------------h------hhhh---H---------HH---------HH-------
Confidence 0 0000 0 00 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHH
Q 039402 1138 SRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERI 1217 (1496)
Q Consensus 1138 ~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi 1217 (1496)
+......++.
T Consensus 287 ----------------------------------------------------------------------~~~~~~~~~~ 296 (552)
T TIGR03719 287 ----------------------------------------------------------------------KARLARYEEL 296 (552)
T ss_pred ----------------------------------------------------------------------HHHHHHHHhh
Confidence 0000000111
Q ss_pred HHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 039402 1218 FQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIV 1297 (1496)
Q Consensus 1218 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ 1297 (1496)
.+. . ++.++.......+...-+.+..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.
T Consensus 297 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~ 372 (552)
T TIGR03719 297 LSQ-E-FQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQE 372 (552)
T ss_pred hhh-c-ccccCCCceeecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCC
Confidence 110 0 0000000000000000012336999999999964 35999999999999999999999999999999999999
Q ss_pred CCCccEEEECCeeCCCCChHHHhcccEEEccccc-ccc-cchhhccCCCC---CC--cHHHHHHHHHHcCCcHHHHhccC
Q 039402 1298 EPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPV-MFE-GTVRSNLDPLE---ES--TDEQIWEALDKCQLGDEVRKKEG 1370 (1496)
Q Consensus 1298 ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~-gTIR~NLdp~~---~~--sd~eI~~aL~~~~L~~~i~~lp~ 1370 (1496)
+|++|+|.+++ + .+|+|+||++. ++. -|+++|+.... .. .+.+..+++++.++.+..
T Consensus 373 ~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----- 436 (552)
T TIGR03719 373 QPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSD----- 436 (552)
T ss_pred CCCCeEEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhH-----
Confidence 99999999964 2 16999999973 664 49999996321 11 133455677777764221
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCE
Q 039402 1371 KLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDL 1449 (1496)
Q Consensus 1371 gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~Dr 1449 (1496)
.+ .....||||||||++||||++.+|++|||||||++||+.+...+.+.|++. . .|||+|+|+++.+.. ||+
T Consensus 437 -~~----~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~ 509 (552)
T TIGR03719 437 -QQ----KKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATH 509 (552)
T ss_pred -hc----CchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCE
Confidence 12 223569999999999999999999999999999999999999999999986 3 489999999999876 999
Q ss_pred EEEEeC-CeEeEe-cChhhHhh
Q 039402 1450 VLLLNH-GLIEEF-DNPANLLE 1469 (1496)
Q Consensus 1450 IlVL~~-G~IvE~-g~p~~Ll~ 1469 (1496)
|++|++ |+++++ |+++++.+
T Consensus 510 i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 510 ILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred EEEEECCCeEEEeCCCHHHHHH
Confidence 999997 688754 67766654
No 80
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.9e-62 Score=549.48 Aligned_cols=455 Identities=26% Similarity=0.434 Sum_probs=351.3
Q ss_pred ccEEEEeeEEEecCC-CCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcC--------
Q 039402 616 TALDIVDGNFSWDIS-SHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG-------- 681 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~-~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g-------- 681 (1496)
..++++|.+.++... ....++++|||++++||.+|+||++|||||--.++|+|+++. -+|+|.++|
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 357889988888643 346789999999999999999999999999999999999975 478999887
Q ss_pred ---------eeEEEccCCcc-CC--CcH----HHHhccCCCCCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCC
Q 039402 682 ---------TKAYVAQSPWI-QS--GKI----EDNILFGKEMNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGI 741 (1496)
Q Consensus 682 ---------~~~yv~Q~~~i-~~--~ti----~eNI~~g~~~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~ 741 (1496)
+|++++|+|-- .| .|| .|-|...+..+.+ +.-+.++..++.+ -...+...+.
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~--------p~~rl~~yPH 156 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPE--------PEKRLDAYPH 156 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCc--------hhhhhhhCCc
Confidence 47999999964 22 244 4555544444332 2223333333322 1223567789
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh--CCcEEEEEccCcCcccc-CCEEEEEeCCe
Q 039402 742 NLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL--SSKTVIYVTHQVEFLPA-ADLILVMKDGK 818 (1496)
Q Consensus 742 ~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 818 (1496)
+|||||||||.||.||..+||+||-||||.|||..+..+|.+ +++.+. .|..+++||||+..+.+ ||+|+||.+|+
T Consensus 157 eLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~-Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ 235 (534)
T COG4172 157 ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILD-LLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGE 235 (534)
T ss_pred ccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHH-HHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccE
Confidence 999999999999999999999999999999999999999975 454443 38999999999999987 99999999999
Q ss_pred EEEecChHHHHhcCcc-hHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccc
Q 039402 819 ITQAGKYNDLINSGTD-FMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQ 897 (1496)
Q Consensus 819 i~~~G~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (1496)
+++.|+.+++...... |.+.+-
T Consensus 236 ivE~~~t~~lF~~PqHpYTr~Ll--------------------------------------------------------- 258 (534)
T COG4172 236 IVETGTTETLFAAPQHPYTRKLL--------------------------------------------------------- 258 (534)
T ss_pred EeecCcHHHHhhCCCChHHHHHH---------------------------------------------------------
Confidence 9999987776543210 100000
Q ss_pred hhHHHHHhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHH
Q 039402 898 LVQEEEREKGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVG 977 (1496)
Q Consensus 898 ~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~ 977 (1496)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 039402 978 SSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTI 1057 (1496)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~ 1057 (1496)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHH
Q 039402 1058 AVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEY 1137 (1496)
Q Consensus 1058 ~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~ 1137 (1496)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHH
Q 039402 1138 SRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERI 1217 (1496)
Q Consensus 1138 ~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi 1217 (1496)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCC---------CCccceeeeEEeeCCcEEEEEcCCCCCHHH
Q 039402 1218 FQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQ---------MPLVLQGISCTFPGGEKTGIVGRTGSGKST 1288 (1496)
Q Consensus 1218 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vLk~iS~~I~~GekvgIVGrTGSGKST 1288 (1496)
..||. ...+|..-...--++.+||.+.|+-. .-.+.+||||++++||.+||||+|||||||
T Consensus 259 ------~aeP~----g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsT 328 (534)
T COG4172 259 ------AAEPS----GDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKST 328 (534)
T ss_pred ------hcCCC----CCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcch
Confidence 00110 00011000112246667777766421 124789999999999999999999999999
Q ss_pred HHHHHhcccCCCccEEEECCeeCCCCChHH---HhcccEEEccccc--ccc-cchhhccC----CCC-CC----cHHHHH
Q 039402 1289 LIQTLFRIVEPAAGQILIDGIDISLIGLHD---LRSRLSIIPQDPV--MFE-GTVRSNLD----PLE-ES----TDEQIW 1353 (1496)
Q Consensus 1289 Ll~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~i~iIpQdp~--LF~-gTIR~NLd----p~~-~~----sd~eI~ 1353 (1496)
|-++|+|+.++. |+|..+|.||...+.++ +|+++-+|.|||+ |=. -||-+-+. -.. .. .|+.+.
T Consensus 329 lG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~ 407 (534)
T COG4172 329 LGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVI 407 (534)
T ss_pred HHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHH
Confidence 999999999876 99999999999988666 6899999999997 221 24444442 111 22 356789
Q ss_pred HHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CC
Q 039402 1354 EALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SD 1431 (1496)
Q Consensus 1354 ~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~ 1431 (1496)
+||+.+||+...... | ...||||||||++||||+.-+|++++||||||+||..-.++|.+.+|+.- .+
T Consensus 408 ~aL~EVGLDp~~r~R---Y-------PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~ 477 (534)
T COG4172 408 EALEEVGLDPATRNR---Y-------PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHG 477 (534)
T ss_pred HHHHHcCCChhHhhc---C-------CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhC
Confidence 999999998765432 2 24689999999999999999999999999999999999999999998764 35
Q ss_pred cEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHHHH
Q 039402 1432 CTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSFSQ 1477 (1496)
Q Consensus 1432 ~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~ 1477 (1496)
-+-++|+|++..++. ||+|+||.+|+|||+|+-+++++++...|.+
T Consensus 478 LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 478 LSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred CeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 699999999999987 9999999999999999999999999877753
No 81
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.6e-60 Score=552.37 Aligned_cols=544 Identities=21% Similarity=0.256 Sum_probs=409.6
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 290 KLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRD-FENEGYVLVSAFCVAKLVECLCQRFRVFRLQQ 368 (1496)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~-~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 368 (1496)
++++..++ .|+.++++++++++..++....=.+-+.+|.-..-... ....-++-+++.=...+..+...+.-...+..
T Consensus 6 p~i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~ 84 (573)
T COG4987 6 PYLRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHD 84 (573)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 34555555 77777777777776666554444444555533211111 01112222333334455666777777777788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH--HHHhHHHHHH
Q 039402 369 LGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYIHDPWLVLFEVALSILIL--YKNLGIASLA 446 (1496)
Q Consensus 369 ~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~~~lL--~~~lg~~~l~ 446 (1496)
...++-+.|+..+|+|...+++.-.....+|++.|++..|++.+++.+..+..+|...+-++.+..+. +..++.+.+.
T Consensus 85 AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll 164 (573)
T COG4987 85 ATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLL 164 (573)
T ss_pred HHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 88999999999999999999999888999999999999999999999999888888766555444433 4556666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 447 ALFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAI 526 (1496)
Q Consensus 447 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~ 526 (1496)
++...+.++.+...+.+..++..++..+.+..-.+...+.+.|+..++++|.++.|.+.++..-..-.+..+|......+
T Consensus 165 ~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~ 244 (573)
T COG4987 165 GLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGL 244 (573)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666667777888888888888888889999999999999999999999988765333222222333322222
Q ss_pred HHHHHHHHH-HHHHHHHH-HHHHHhcCCcC-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 039402 527 SSFVFWGAP-TFVSVATF-GTCILLNVPLE-SGKMLSAIATFRLLQVPIY-NLPDVISMIIQTKVSLQRIASFFCLDDLQ 602 (1496)
Q Consensus 527 ~~~~~~~~p-~~v~~~~f-~~~~~~~~~L~-~~~vft~l~l~~~l~~pl~-~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~ 602 (1496)
..+...... .++....+ ..+..-.+..+ +..+...+..|..+. +.. ..|..+....+...|.+|+.+.++.++..
T Consensus 245 ~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~e-af~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~ 323 (573)
T COG4987 245 SDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALE-AFEPLAPGAFQHLGQVIASARRLNDILDQKPEV 323 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHH-HHhhhcchhHHHhhHHHHHHHHHhhhccCCccc
Confidence 222222111 11111111 11111122333 233333333333333 232 23377888999999999999988765543
Q ss_pred CccccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe
Q 039402 603 PDLVEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT 682 (1496)
Q Consensus 603 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~ 682 (1496)
....++.+ .....++++|++|+|+.+ +.++|+|+||++++||++||+|++|||||||++.|.|-++|++|+|..+|.
T Consensus 324 ~~~~~~~~--~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~ 400 (573)
T COG4987 324 TFPDEQTA--TTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGV 400 (573)
T ss_pred CCCccccC--CccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCc
Confidence 32211111 122279999999999854 568999999999999999999999999999999999999999999999982
Q ss_pred -------------eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 -------------KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 -------------~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
+++++|.+++|++|+|||+..+++ .++|...++++..+|++.++..|+|.+|.+||.|..||||||
T Consensus 401 ~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~ 480 (573)
T COG4987 401 EIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGER 480 (573)
T ss_pred ChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHH
Confidence 578999999999999999999986 577888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l 828 (1496)
||++|||++.+|++++||||||.+||+.|++++.+.+ ....+|||+|+|||++..++.+|+|++|++|+++++|+|.++
T Consensus 481 rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll-~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~L 559 (573)
T COG4987 481 RRLALARALLHDAPLWLLDEPTEGLDPITERQVLALL-FEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAEL 559 (573)
T ss_pred HHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHH-HHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhh
Confidence 9999999999999999999999999999999998654 445679999999999999999999999999999999999999
Q ss_pred HhcCcchHHHH
Q 039402 829 INSGTDFMELV 839 (1496)
Q Consensus 829 ~~~~~~~~~~~ 839 (1496)
+.+++.|.++.
T Consensus 560 l~~~g~~~~l~ 570 (573)
T COG4987 560 LANNGRYKRLY 570 (573)
T ss_pred hccccHHHHHh
Confidence 99888888765
No 82
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.2e-59 Score=648.69 Aligned_cols=548 Identities=16% Similarity=0.165 Sum_probs=404.5
Q ss_pred hHHHHHHHHhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 290 KLIKAMFCSVWKDV-LVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQ 368 (1496)
Q Consensus 290 ~l~~al~~~~~~~~-~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 368 (1496)
+.++..++..++.. ++.+++.++..++....|+.++...+............+.+ ..+++..++..++.....+....
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~-~iy~~l~i~~~~~~~~~~~~~~~ 1031 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRL-SVYGALGILQGFAVFGYSMAVSI 1031 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666553322 23333444555666677777776654211010011111111 12222223333333333444556
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 039402 369 LGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAA 447 (1496)
Q Consensus 369 ~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~ 447 (1496)
.+.+.-..+...+|++.++.+...+++.++|+++|++++|++.+.+.+. .+..+...++.++.++++++....+.+++.
T Consensus 1032 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~ 1111 (1522)
T TIGR00957 1032 GGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII 1111 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888888888999999999999999999999999999999998654 444555566666666555544434433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 448 LFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAIS 527 (1496)
Q Consensus 448 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~ 527 (1496)
++++++...+..++.+..++.++...+.++...+..+|.++|+++||.|++|+.|.++..+..+...+..........+.
T Consensus 1112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1522)
T TIGR00957 1112 PPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWL 1191 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444445555555566677778899999999999999999999998887665554443322222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccc
Q 039402 528 SFVFWGAPTFVSVATFGTCILL-NVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLV 606 (1496)
Q Consensus 528 ~~~~~~~p~~v~~~~f~~~~~~-~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~ 606 (1496)
.........+ .++..+.+.+. .+.+++|.+..++.+...+..|+..+...+..+.++.+|.+|+.+|++.++..+...
T Consensus 1192 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1270 (1522)
T TIGR00957 1192 AVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQI 1270 (1522)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 1111111111 11222333333 567999999999999999999999999999999999999999999997654332111
Q ss_pred -cCCCCC--CCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-
Q 039402 607 -EKQPSG--SSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT- 682 (1496)
Q Consensus 607 -~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~- 682 (1496)
...+.. +..+.|+++|++|+|+.+ .+++|+|+||+|++||++||||++|||||||+++|+|+++|++|+|.+||.
T Consensus 1271 ~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1271 QETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLN 1349 (1522)
T ss_pred cCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEE
Confidence 111111 234579999999999743 357999999999999999999999999999999999999999999999994
Q ss_pred ------------eEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 683 ------------KAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 683 ------------~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
++||||+|.+|+|||||||....++++++..++++.|++++.++.+|+|.+|.+||+|.+||||||||
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQr 1429 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQL 1429 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHH
Confidence 59999999999999999998333688889999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHh
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
++||||++++|+|+|||||||+||+++.+.| ++.++...+++|+|+|+||++.+..+|+|+||++|+|++.|+|+|+++
T Consensus 1430 l~LARALLr~~~ILiLDEaTSalD~~Te~~I-q~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~ 1508 (1522)
T TIGR00957 1430 VCLARALLRKTKILVLDEATAAVDLETDNLI-QSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQ 1508 (1522)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHH-HHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999998777 456676778999999999999999999999999999999999999998
Q ss_pred cCcchHHHHHH
Q 039402 831 SGTDFMELVGA 841 (1496)
Q Consensus 831 ~~~~~~~~~~~ 841 (1496)
+++.|.+++..
T Consensus 1509 ~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1509 QRGIFYSMAKD 1519 (1522)
T ss_pred CCCHHHHHHHH
Confidence 88888887653
No 83
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-61 Score=614.36 Aligned_cols=200 Identities=20% Similarity=0.350 Sum_probs=169.1
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
..|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+++. .++
T Consensus 311 ~~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 311 PLLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred ceEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 36999999999964 35999999999999999999999999999999999999999999999741 269
Q ss_pred EEEcccc--cccc-cchhhccCC-CCCCcHHHHHHHHHHcCCcH-HHHhccCCcccccccCCCCCCchHHHHHHHHHHHc
Q 039402 1324 SIIPQDP--VMFE-GTVRSNLDP-LEESTDEQIWEALDKCQLGD-EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLL 1398 (1496)
Q Consensus 1324 ~iIpQdp--~LF~-gTIR~NLdp-~~~~sd~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALL 1398 (1496)
+|+||++ .+.. .|+.+++.. .....++++.+.|+..++.+ ..... ...||||||||++||||++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~-----------~~~LSgGekqRl~La~~l~ 446 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKVTEE-----------TRRFSGGEKARLVLALIVW 446 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHhcCc-----------hhhCCHHHHHHHHHHHHHh
Confidence 9999985 3443 378887632 22334567788888888753 22222 2468999999999999999
Q ss_pred cCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEe-EecChhhHhh
Q 039402 1399 KRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIE-EFDNPANLLE 1469 (1496)
Q Consensus 1399 r~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~Iv-E~g~p~~Ll~ 1469 (1496)
++|++|||||||++||..+...+.+.|++. +.|||+|+|+...+.. ||+|++|++|+++ ..|++++..+
T Consensus 447 ~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 447 QRPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 999999999999999999999999999886 4599999999999976 9999999999998 5688888753
No 84
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.8e-59 Score=541.65 Aligned_cols=522 Identities=21% Similarity=0.299 Sum_probs=417.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 039402 312 LYTLASYVGPYLIDTFVQYLNGRRDFE---NEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAALIAMIYNKGLTL 388 (1496)
Q Consensus 312 ~~~~~~~~~P~ll~~~i~~~~~~~~~~---~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l 388 (1496)
..-.+....|++++..++-+.+.+..+ ......+.+++++.+..+.++....+....+..++-......+|++.+.+
T Consensus 41 ~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~l 120 (591)
T KOG0057|consen 41 GAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSL 120 (591)
T ss_pred hhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334666778999999999886322212 12234555677777888888888888888889999899999999999999
Q ss_pred CcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 039402 389 SSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAAL-FGTVIVMLVNIPLGRVQE 466 (1496)
Q Consensus 389 s~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l-~~~~~~~~~~~~~~~~~~ 466 (1496)
+.+.+.+..+|++.+.|..-...|.++.. .+..+.-..+++.+....++...|.+..+.. ..+.....+.......-.
T Consensus 121 d~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn 200 (591)
T KOG0057|consen 121 DLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRN 200 (591)
T ss_pred hHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHH
Confidence 99999999999999999988888888653 3445556667888888889999997654433 333344445556678888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 039402 467 NFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIIN-LRKRETGWLKKYVYTSAISSFVFWG--APTFVSVATF 543 (1496)
Q Consensus 467 ~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~-~R~~E~~~l~~~~~~~~~~~~~~~~--~p~~v~~~~f 543 (1496)
+++++++++.++-.+..-+.|.|-.+||.|+-|+...++... +++.|...++....+. +.++..-. +..++.++..
T Consensus 201 ~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~-~lnfgQ~~iFsv~~~~im~l 279 (591)
T KOG0057|consen 201 RFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLA-FLNFGQKAIFSVALTFIMVL 279 (591)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998888754 3444444333332222 22221111 1111222222
Q ss_pred HHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCccEEEEee
Q 039402 544 GTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSGSSETALDIVDG 623 (1496)
Q Consensus 544 ~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~ 623 (1496)
+..-+.++.+|.+...-..+++..|..|+..|...+..+.|+..-++-.......++...+ ...|....+..|+++|+
T Consensus 280 ~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~--~~~~i~~~~~~I~F~dV 357 (591)
T KOG0057|consen 280 GSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE--AALPIELFGGSIEFDDV 357 (591)
T ss_pred HhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh--ccCCcccCCCcEEEEee
Confidence 3333456789999999999999999999999999999999988877765443322221111 11122233456999999
Q ss_pred EEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eEEEccCC
Q 039402 624 NFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYVAQSP 690 (1496)
Q Consensus 624 ~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~yv~Q~~ 690 (1496)
+|+|. +++++|+++||+|++||++||+|+|||||||++++|+++++ ++|+|.+||. +|||||+.
T Consensus 358 ~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~ 434 (591)
T KOG0057|consen 358 HFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDS 434 (591)
T ss_pred EEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcc
Confidence 99997 34679999999999999999999999999999999999999 9999999994 69999999
Q ss_pred ccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecC
Q 039402 691 WIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDP 769 (1496)
Q Consensus 691 ~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep 769 (1496)
.+||+||.+||.+|.+ ...++..++++..++++-+..+|+|++|.+||+|..|||||||||+||||+.+||+|+++|||
T Consensus 435 ~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEa 514 (591)
T KOG0057|consen 435 VLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEA 514 (591)
T ss_pred cccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCc
Confidence 9999999999999986 566777788888899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchHHHHH
Q 039402 770 FSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFMELVG 840 (1496)
Q Consensus 770 ~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~ 840 (1496)
||+||.+|++.+++. +.....+||+|+|.|+++.++.||+|+++++|++.+.|+++|++.+.+.|.+++.
T Consensus 515 TS~LD~~TE~~i~~~-i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~ 584 (591)
T KOG0057|consen 515 TSALDSETEREILDM-IMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWT 584 (591)
T ss_pred ccccchhhHHHHHHH-HHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhc
Confidence 999999999999875 4457789999999999999999999999999999999999999997777777653
No 85
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.4e-59 Score=602.30 Aligned_cols=199 Identities=22% Similarity=0.336 Sum_probs=167.1
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++||+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|+
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEcccc-ccccc-chhhccCCC-CCC--c--HHHHHHHHHHcCCcH-HHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDP-VMFEG-TVRSNLDPL-EES--T--DEQIWEALDKCQLGD-EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp-~LF~g-TIR~NLdp~-~~~--s--d~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
|+||++ .++.. |+++|+... ... . +.++.+.|+..++.+ ... .+ ...||||||||++||||
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~----~~~LSgGekqRl~la~a 454 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRAM-------TP----VKALSGGERNRLLLARL 454 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHHh-------Ch----hhhCCHHHHHHHHHHHH
Confidence 999986 46655 999999632 111 2 445677787777642 222 22 24699999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEe-CCeEeEe-cChhhHhh
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLN-HGLIEEF-DNPANLLE 1469 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~-~G~IvE~-g~p~~Ll~ 1469 (1496)
++++|++|||||||++||..+...+.+.|++. ++|||+|||+.+.+.. ||+|++|+ +|+|.++ |++.+.++
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999875 5699999999999875 99999998 8999986 56666643
No 86
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.2e-58 Score=627.90 Aligned_cols=211 Identities=22% Similarity=0.275 Sum_probs=177.1
Q ss_pred eEEEEeEEeEeCC-----------CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC--CccEEEECCeeC
Q 039402 1245 KIDLLDLQVRYAP-----------QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP--AAGQILIDGIDI 1311 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~-----------~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep--~~G~I~IDG~dI 1311 (1496)
.+.|+||++..+. +...+|+|||++++|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999988742 123699999999999999999999999999999999999763 689999999886
Q ss_pred CCCChHHHhcccEEEccccccccc-chhhccCCC------CCCcHH----HHHHHHHHcCCcHHHHhccCCcccccccCC
Q 039402 1312 SLIGLHDLRSRLSIIPQDPVMFEG-TVRSNLDPL------EESTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENG 1380 (1496)
Q Consensus 1312 ~~i~l~~LR~~i~iIpQdp~LF~g-TIR~NLdp~------~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1380 (1496)
. ...+|+.++|++|++.++.. |+||||... .+.+++ .+.++++..+|.+. .|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 24577889999999987764 999999521 122332 36678888887543 356666544
Q ss_pred -CCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcch-h-cccCEEEEEeC-
Q 039402 1381 -ENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITS-V-IDSDLVLLLNH- 1455 (1496)
Q Consensus 1381 -~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~t-i-~~~DrIlVL~~- 1455 (1496)
..||||||||++|||+|+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6799999999999999999999999999999999999999999999864 47899999999984 4 56999999996
Q ss_pred CeEeEecChh
Q 039402 1456 GLIEEFDNPA 1465 (1496)
Q Consensus 1456 G~IvE~g~p~ 1465 (1496)
|+++.+|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999874
No 87
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-59 Score=529.65 Aligned_cols=529 Identities=21% Similarity=0.313 Sum_probs=402.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 306 TGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVE------CLCQRFRVFRLQQLGIRMRAALIA 379 (1496)
Q Consensus 306 ~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~------~l~~~~~~~~~~~~~~~ir~~L~~ 379 (1496)
..++..+.-+.....|.+.+.+++-+..+..+.+ .++....+.++++ .+......|..-++..-....+-.
T Consensus 220 cl~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~---~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~ 296 (790)
T KOG0056|consen 220 CLFLLIIGRLINVSLPILSKWIVDELTAPDTFQY---SLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIET 296 (790)
T ss_pred HHHHHHHHHHHhhhhHHhHHHHHHhhcCcchhhH---HHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHH
Confidence 3445555566677779999999998875433322 2222222222222 334444455555566666667788
Q ss_pred HHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHH
Q 039402 380 MIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYI-HDPWLVLFEVALSILILYKNL-GIASLAALFGTVIVMLV 457 (1496)
Q Consensus 380 ~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~~~~~lL~~~l-g~~~l~~l~~~~~~~~~ 457 (1496)
.+|++.+.||....-+..+||+...|....+.+. +..++ ..+--..+-++++++..+... -|-.++.++.+.+...+
T Consensus 297 ~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~ 375 (790)
T KOG0056|consen 297 ELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYV 375 (790)
T ss_pred HHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhhe
Confidence 8999999999998888899999999887666665 33222 222223344555544333222 23334444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 458 NIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSK----IINLRKRETGWLKKYVYTSAISSFVFWG 533 (1496)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~----i~~~R~~E~~~l~~~~~~~~~~~~~~~~ 533 (1496)
...+.....++++++..+-.+-...-.+.+-|..++|.|+-|+...++ |.+..++|.+.+....++......++-.
T Consensus 376 Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~l 455 (790)
T KOG0056|consen 376 TIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGL 455 (790)
T ss_pred eeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 455566777888888777777777788999999999999999765544 4555555655544433333332222211
Q ss_pred HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCC
Q 039402 534 APTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSGS 613 (1496)
Q Consensus 534 ~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~ 613 (1496)
.++....+.+|.+..+.++.|...-+..++..|..|++.+.....+++.+.+-++|+.+.+++++.-.+.....|-..
T Consensus 456 --gll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~ 533 (790)
T KOG0056|consen 456 --GLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKV 533 (790)
T ss_pred --HHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccc
Confidence 122222344555667789999999999999999999999999999999999999999999976544333222222223
Q ss_pred CCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------
Q 039402 614 SETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----------- 682 (1496)
Q Consensus 614 ~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~----------- 682 (1496)
..+.|+++|++|+|++ ++|+|+||||++++|+.+|+|||+|+||||+++++.++++..+|.|.++|+
T Consensus 534 ~~G~i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLR 611 (790)
T KOG0056|consen 534 TQGKIEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLR 611 (790)
T ss_pred cCCeEEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHH
Confidence 4567999999999974 689999999999999999999999999999999999999999999999995
Q ss_pred --eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHcc
Q 039402 683 --KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQ 759 (1496)
Q Consensus 683 --~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~ 759 (1496)
+|.|||+.-+||.||..||.++++ ...|+..++.++++.++.+-.+|+|+.|.+||||-.||||+|||||+||++.+
T Consensus 612 s~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK 691 (790)
T KOG0056|consen 612 SSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILK 691 (790)
T ss_pred HhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhc
Confidence 599999999999999999999987 34455667788999999999999999999999999999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhc-CcchHHH
Q 039402 760 DSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINS-GTDFMEL 838 (1496)
Q Consensus 760 ~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~-~~~~~~~ 838 (1496)
+|.|++|||.|||||.++++.| +.++..+.+++|-|+|.|+++.+-.||.|+++++|+|++.|+|+|++.+ ++.|.++
T Consensus 692 ~P~iIlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~M 770 (790)
T KOG0056|consen 692 APSIILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADM 770 (790)
T ss_pred CCcEEEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHH
Confidence 9999999999999999999988 6788888899999999999999999999999999999999999999987 7889998
Q ss_pred HHHhH
Q 039402 839 VGAHE 843 (1496)
Q Consensus 839 ~~~~~ 843 (1496)
++++.
T Consensus 771 Wq~qq 775 (790)
T KOG0056|consen 771 WQAQQ 775 (790)
T ss_pred HHHHH
Confidence 87543
No 88
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.2e-58 Score=532.67 Aligned_cols=485 Identities=20% Similarity=0.227 Sum_probs=365.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHH
Q 039402 972 VALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSII 1051 (1496)
Q Consensus 972 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~ 1051 (1496)
+++.++..++..+|+..+...+.+.-.++....+...+++|..--...+....+ +|.+.+-.++...-...++..=
T Consensus 70 l~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaP 145 (580)
T COG4618 70 LGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAP 145 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCc
Confidence 344566777888999999999999999999999999988877644333333333 3555555554432222222111
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHH
Q 039402 1052 RILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNM 1131 (1496)
Q Consensus 1052 ~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~ 1131 (1496)
..-..+++++...|++.++.+.-.++.+.+.-.--...|+--+.-++....-.++..-+..+.++|+|.|+.....+++.
T Consensus 146 W~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~ 225 (580)
T COG4618 146 WMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWG 225 (580)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHH
Confidence 12233455556677776655443333322222222223333333444555667788889999999999999887777766
Q ss_pred HHHHHHhh----HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1132 KLMDEYSR----PTFHIAAAMEWL-GLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACD 1206 (1496)
Q Consensus 1132 ~~~d~~~~----~~~~~~~~~~wl-~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~ 1206 (1496)
+....+.. +.-.......-- .+|+- +.+.+.... ..+...|.+++|..-..-...-..-.++...+..|-+
T Consensus 226 ~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~-lQs~iLg~G---A~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq 301 (580)
T COG4618 226 RFNAAYLSAQERASDRNGAFGALSRALRMA-LQSAVLGLG---AWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQ 301 (580)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHH-HHHHHHhcc---eeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHH
Confidence 55444333 222221111111 11111 111111111 2334578888886544433334445667788899999
Q ss_pred HHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCH
Q 039402 1207 LENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGK 1286 (1496)
Q Consensus 1207 le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGK 1286 (1496)
+-....|..|+.+.++..+++....+ -| ..+|.+.++++++.-++...++|+||||+++|||-+||||||||||
T Consensus 302 ~~~Ar~s~~Rl~~lL~~~p~~~~~m~--LP----~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGK 375 (580)
T COG4618 302 FVAARQSYKRLNELLAELPAAAERMP--LP----APQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGK 375 (580)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCC--CC----CCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccH
Confidence 99999999999999875444322111 11 1268999999999766666789999999999999999999999999
Q ss_pred HHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCC-CCcHHHHHHHHHHcCCcHHH
Q 039402 1287 STLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE-ESTDEQIWEALDKCQLGDEV 1365 (1496)
Q Consensus 1287 STLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i 1365 (1496)
|||.++|.|...|++|.|.+||-|+.+.+.+++-++|||.|||..||+|||.+||.-|+ +.+++.|.+|.+.++.||.|
T Consensus 376 STLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelI 455 (580)
T COG4618 376 STLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELI 455 (580)
T ss_pred HHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHH
Confidence 99999999999999999999999999999999999999999999999999999998877 77888899999999999999
Q ss_pred HhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchh
Q 039402 1366 RKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSV 1444 (1496)
Q Consensus 1366 ~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti 1444 (1496)
.++|+||||.|||+|..||||||||++||||++.+|+++|||||-||||.+-|+.+.++|.+.. +++|+|+||||++.+
T Consensus 456 l~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L 535 (580)
T COG4618 456 LRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSAL 535 (580)
T ss_pred HhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998764 689999999999999
Q ss_pred cccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1445 IDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1445 ~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
..+|+|+||++|++..||+-+|.+++
T Consensus 536 ~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 536 ASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred hhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999999864
No 89
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5e-57 Score=620.67 Aligned_cols=470 Identities=17% Similarity=0.150 Sum_probs=362.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 039402 370 GIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIASLAAL 448 (1496)
Q Consensus 370 ~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l 448 (1496)
+.+....+...+|++.++.+...+++++.|+|+|++++|++.+.+.+. .+..+....+.++.++++++....+..++.+
T Consensus 1026 ~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i 1105 (1560)
T PTZ00243 1026 MRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALV 1105 (1560)
T ss_pred HHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445677888999999999999999999999999999999998654 3444555555555555554433333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 449 FGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISS 528 (1496)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~ 528 (1496)
.++++...+...+.+..+..++.....++.....++|.++|+++||.|++|+.|.++..+.-+...+...+......+..
T Consensus 1106 ~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~ 1185 (1560)
T PTZ00243 1106 PCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLG 1185 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333334445555666666667777888999999999999999999999988876544433332222111111111
Q ss_pred HHHH-H-HHHHHHHHHHHHHH--HhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-
Q 039402 529 FVFW-G-APTFVSVATFGTCI--LLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQP- 603 (1496)
Q Consensus 529 ~~~~-~-~p~~v~~~~f~~~~--~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~- 603 (1496)
.... . ....+.++.++.+. ...+.+++|.+..++.+...+..|+..+...+..+.++.+|++|+.++++..+.++
T Consensus 1186 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~ 1265 (1560)
T PTZ00243 1186 VRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDM 1265 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 1111 1 11111222222222 22345788988888888888999999999999999999999999999996322110
Q ss_pred cc-----------------------c-cCC-----CCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEec
Q 039402 604 DL-----------------------V-EKQ-----PSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGT 654 (1496)
Q Consensus 604 ~~-----------------------~-~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~ 654 (1496)
.. . ... +.....+.|+++|++|+|+.+ .+++|+|+||+|++||++||||+
T Consensus 1266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGr 1344 (1560)
T PTZ00243 1266 PELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGR 1344 (1560)
T ss_pred ccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECC
Confidence 00 0 000 001123469999999999643 35699999999999999999999
Q ss_pred CCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhch
Q 039402 655 VGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSL 721 (1496)
Q Consensus 655 ~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l 721 (1496)
+|||||||+++|+|+++|++|+|.+||. ++||||+|.+|+|||||||..+.++++++..++++.|++
T Consensus 1345 TGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l 1424 (1560)
T PTZ00243 1345 TGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGL 1424 (1560)
T ss_pred CCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999984 599999999999999999988778889999999999999
Q ss_pred hhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC-CCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEcc
Q 039402 722 KKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD-SDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTH 800 (1496)
Q Consensus 722 ~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~-~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH 800 (1496)
++.++.+|.|.+|.+||+|.+||||||||++|||||+++ |+|+|||||||+||+++.+.|. +.++...+++|+|+|+|
T Consensus 1425 ~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq-~~L~~~~~~~TvI~IAH 1503 (1560)
T PTZ00243 1425 RERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQ-ATVMSAFSAYTVITIAH 1503 (1560)
T ss_pred hHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHH-HHHHHHCCCCEEEEEec
Confidence 999999999999999999999999999999999999996 8999999999999999988874 56666778999999999
Q ss_pred CcCccccCCEEEEEeCCeEEEecChHHHHhc-CcchHHHHHH
Q 039402 801 QVEFLPAADLILVMKDGKITQAGKYNDLINS-GTDFMELVGA 841 (1496)
Q Consensus 801 ~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~-~~~~~~~~~~ 841 (1496)
+++.+..||+|++|++|+|++.|+++|++++ ++.|.+++..
T Consensus 1504 Rl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~ 1545 (1560)
T PTZ00243 1504 RLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEA 1545 (1560)
T ss_pred cHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHH
Confidence 9999999999999999999999999999974 6788887754
No 90
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=6.4e-59 Score=595.02 Aligned_cols=200 Identities=19% Similarity=0.288 Sum_probs=166.9
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcc
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSR 1322 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1322 (1496)
...|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ +.+
T Consensus 506 ~~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~ 573 (718)
T PLN03073 506 PPIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVR 573 (718)
T ss_pred CceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------cee
Confidence 3469999999999643 3599999999999999999999999999999999999999999999875 357
Q ss_pred cEEEcccccccccchhhccC-----CCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1323 LSIIPQDPVMFEGTVRSNLD-----PLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1323 i~iIpQdp~LF~gTIR~NLd-----p~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
|+|+||++. ...++.+|.. .+...+++++.++|+..++.+.... .....||||||||++||||+
T Consensus 574 igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~----------~~~~~LSgGqkqRvaLAraL 642 (718)
T PLN03073 574 MAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLAL----------QPMYTLSGGQKSRVAFAKIT 642 (718)
T ss_pred EEEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhc----------CCccccCHHHHHHHHHHHHH
Confidence 999999973 2234445421 1223467888999999998642211 12357999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEe-EecChhhH
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIE-EFDNPANL 1467 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~Iv-E~g~p~~L 1467 (1496)
+++|++|||||||++||+.+...+.+.+++. + .|||+|||+++.+.. ||+|++|++|+++ ..|++++.
T Consensus 643 ~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 643 FKKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 9999999999999999999999999999875 3 599999999999986 9999999999998 45777664
No 91
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1e-56 Score=569.00 Aligned_cols=513 Identities=16% Similarity=0.132 Sum_probs=381.3
Q ss_pred HHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 293 KAMFC-SVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGI 371 (1496)
Q Consensus 293 ~al~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~ 371 (1496)
..+++ .+++.+++..++.++..++..+.|++++.+++...... ....+.+++ + .++..++.....+...+.+.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 82 (555)
T TIGR01194 9 LALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLG--QGSLFSFGG-L---CLLALLFRIGADIFPAYAGM 82 (555)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--chHHHHHHH-H---HHHHHHHHHHHHHHHHHHHH
Confidence 33677 88899999999999999999999999998875321110 011111111 1 22333445555666778899
Q ss_pred HHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 039402 372 RMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYIHDPWLVLFEVALSILILYKNLGIASLAALFGT 451 (1496)
Q Consensus 372 ~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~~ 451 (1496)
++...++..+|+|.++++....+++++|++++++++|++.+.+++..+.......+.+++++++++..-...+++.++.+
T Consensus 83 ~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~ 162 (555)
T TIGR01194 83 HIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAITISAI 162 (555)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997655444455455455444444433333333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 452 VIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEM--KFLSKIINLRKRETGWLKKYVYTSAISSF 529 (1496)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~--~~~~~i~~~R~~E~~~l~~~~~~~~~~~~ 529 (1496)
++.+.+..+..++.++...+..+..++..+...|.++|++++|.++.++ ...+++.+..++..+...+..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (555)
T TIGR01194 163 IIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAEN 242 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444455566667777788888899999999999999999999854 33444433322222222111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHH---hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcc-
Q 039402 530 VFWGAPTFVSVATFGTCIL---LNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDL- 605 (1496)
Q Consensus 530 ~~~~~p~~v~~~~f~~~~~---~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~- 605 (1496)
+..... .+.++.+++ ..+.++.|.+++++.+...+..|+..+...+..+.++++|++||.++++.++.++..
T Consensus 243 ~~~~~~----~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~ 318 (555)
T TIGR01194 243 FGQLLF----FLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPEL 318 (555)
T ss_pred HHHHHH----HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 111111 111111111 125799999999999999999999999999999999999999999998632211100
Q ss_pred --ccCC-----CCCCCCccEEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccE
Q 039402 606 --VEKQ-----PSGSSETALDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGT 676 (1496)
Q Consensus 606 --~~~~-----~~~~~~~~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~ 676 (1496)
.+.. +.......++++|++|+|+..+ .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~ 398 (555)
T TIGR01194 319 ELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGE 398 (555)
T ss_pred cccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcE
Confidence 0000 1111234699999999997432 246999999999999999999999999999999999999999999
Q ss_pred EEEcCe-------------eEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCC
Q 039402 677 LKLCGT-------------KAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINL 743 (1496)
Q Consensus 677 i~~~g~-------------~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~L 743 (1496)
|.++|. ++||+|+|++|++|+++|+ ....++++.+++++.++++++++.+|+|++|. .+|
T Consensus 399 i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~L 471 (555)
T TIGR01194 399 ILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TAL 471 (555)
T ss_pred EEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccC
Confidence 999984 4899999999999999995 33456777888999999999999999999984 799
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCccccCCEEEEEeCCeEEEe
Q 039402 744 SGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPAADLILVMKDGKITQA 822 (1496)
Q Consensus 744 SGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 822 (1496)
|||||||++||||++++|+|+|||||||+||+++++.+.+.+++.. .+++|+|+|||+++.+..||+|++|++|++++.
T Consensus 472 SgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 472 STGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999987666443 468999999999999889999999999999864
No 92
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=6.7e-57 Score=520.34 Aligned_cols=529 Identities=21% Similarity=0.294 Sum_probs=432.0
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 289 VKLIKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQ 368 (1496)
Q Consensus 289 ~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~ 368 (1496)
.....+..-.+++.++..+++..+-.++...+|+.+-++-|-+-...+.+ ....+.++....+++..+++....+...|
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~-TLv~Ltvlal~ly~~~glLd~iR~~~l~R 89 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVP-TLVMLTVLALGLYAFQGLLDAIRSRVLVR 89 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777778888888999999999999999999888877765544322 23445555666777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH------HhhHHHHHHHHHHHHHHHHHHHhHH
Q 039402 369 LGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW------YIHDPWLVLFEVALSILILYKNLGI 442 (1496)
Q Consensus 369 ~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~------~~~~~~~~pl~i~~~~~lL~~~lg~ 442 (1496)
+|.++-..|...+|.-+++............+.+ .|.+.+..|.. .+..+|. |+.+.+ ++++.-.+|+
T Consensus 90 ig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~-P~yl~v-~fl~Hp~lG~ 163 (580)
T COG4618 90 IGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWM-PLYLAV-IFLFHPWLGL 163 (580)
T ss_pred HHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchH-HHHHHH-HHHHHHHHHH
Confidence 9999999999999999976555443222223332 58888888853 4555665 544433 3556668899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 443 ASLAALFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVY 522 (1496)
Q Consensus 443 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~ 522 (1496)
.+++|.++++.+..+|-.++ ++--++-.+..-+|.......++|..+|+.+|......+++.+.....+.+......
T Consensus 164 ~a~~ga~iLv~la~ln~~~t---~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd 240 (580)
T COG4618 164 IALAGAIILVVLALLNERAT---RKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASD 240 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHH
Confidence 88888888887777765554 444555677778888999999999999999999999999999888877777666555
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 039402 523 TSAISSFVFWGAPTFV--SVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDD 600 (1496)
Q Consensus 523 ~~~~~~~~~~~~p~~v--~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e 600 (1496)
.......+.-..-.+. .++..|.|+++.+++|+|.+++.-.+..-.-.|+......+.++..++.|.+|++++|....
T Consensus 241 ~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p 320 (580)
T COG4618 241 RNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELP 320 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 4444333333333333 34556788888999999999999888888888999999999999999999999999997543
Q ss_pred CCCccccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEc
Q 039402 601 LQPDLVEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLC 680 (1496)
Q Consensus 601 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~ 680 (1496)
..... .+-+.++..+.++++++.-+ +.++++++|+||++++||-++||||||||||||.++|.|..+|.+|.|++|
T Consensus 321 ~~~~~---m~LP~P~g~L~Ve~l~~~PP-g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLD 396 (580)
T COG4618 321 AAAER---MPLPAPQGALSVERLTAAPP-GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLD 396 (580)
T ss_pred cccCC---CCCCCCCceeeEeeeeecCC-CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEec
Confidence 32221 22223456799999999664 456899999999999999999999999999999999999999999999999
Q ss_pred C-------------eeEEEccCCccCCCcHHHHhc-cCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChH
Q 039402 681 G-------------TKAYVAQSPWIQSGKIEDNIL-FGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGG 746 (1496)
Q Consensus 681 g-------------~~~yv~Q~~~i~~~ti~eNI~-~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 746 (1496)
| ++||.||+..+|.|||.|||. |+.+.|.+++-++.+..+.++-+-.+|+|++|.||+.|.+||||
T Consensus 397 ga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgG 476 (580)
T COG4618 397 GADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGG 476 (580)
T ss_pred chhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCch
Confidence 8 479999999999999999996 77788999888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChH
Q 039402 747 QKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||||+||||+|.||.+++||||-|+||.+.+..+.+.+..-..+|.|+|+|||+++.+..+|+|++|++|++...|+.+
T Consensus 477 QRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~ 556 (580)
T COG4618 477 QRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPRE 556 (580)
T ss_pred HHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHH
Confidence 99999999999999999999999999999999998766555556799999999999999999999999999999999999
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
|++++
T Consensus 557 eVLa~ 561 (580)
T COG4618 557 EVLAK 561 (580)
T ss_pred HHHHH
Confidence 98753
No 93
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.1e-57 Score=558.83 Aligned_cols=485 Identities=24% Similarity=0.358 Sum_probs=346.7
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--eeEEEccCCccCC
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS 694 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--~~~yv~Q~~~i~~ 694 (1496)
.+.+++++++|+ ++++++|+||++.+|++++|||+|||||||||++|.|+..|++|+|...+ +++|++|++....
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 478899999994 57899999999999999999999999999999999999999999999987 7999999999875
Q ss_pred C-cHHHHhccCCCCC---HHHHHHHHH---------------------HhchhhHHHhc--cCCCcccccCCCCCCChHH
Q 039402 695 G-KIEDNILFGKEMN---RERYNAVLD---------------------ACSLKKDLEIL--SFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 695 ~-ti~eNI~~g~~~~---~~~~~~v~~---------------------~~~l~~d~~~l--~~g~~t~ig~~g~~LSGGQ 747 (1496)
. |+.|.+..+...- ..+++.... ...++.+++.. ..|.... .....+|||||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LSGG~ 158 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLSGGW 158 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcCHHH
Confidence 5 9999998875311 111111111 00111112111 1233322 56778999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEE-EecCh
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKIT-QAGKY 825 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~-~~G~~ 825 (1496)
|.||+|||||..+||+|||||||++||..+..++- +.+.. .+| |+|+||||.+||.. |++|+.++.|++. +.|+|
T Consensus 159 r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe-~~L~~-~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny 235 (530)
T COG0488 159 RRRVALARALLEEPDLLLLDEPTNHLDLESIEWLE-DYLKR-YPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNY 235 (530)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHH-HHHHh-CCC-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCH
Confidence 99999999999999999999999999999998884 44433 346 99999999999987 9999999999876 77888
Q ss_pred HHHHhcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHh
Q 039402 826 NDLINSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEERE 905 (1496)
Q Consensus 826 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 905 (1496)
+.+++....-.+. ... ..+ . ++++.+
T Consensus 236 ~~~~~~r~~~~~~----~~~--------------------------------------------~~~-~-----~~~~~~ 261 (530)
T COG0488 236 SSYLEQKAERLRQ----EAA--------------------------------------------AYE-K-----QQKELA 261 (530)
T ss_pred HHHHHHHHHHHHH----HHH--------------------------------------------HHH-H-----HHHHHH
Confidence 7765432100000 000 000 0 000000
Q ss_pred hccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHH
Q 039402 906 KGKVGFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLAR 985 (1496)
Q Consensus 906 ~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~ 985 (1496)
+ -..++.. ..
T Consensus 262 ~-------~~~~i~r------------------------------~~--------------------------------- 271 (530)
T COG0488 262 K-------EQEWIRR------------------------------GK--------------------------------- 271 (530)
T ss_pred H-------HHHHHHH------------------------------HH---------------------------------
Confidence 0 0000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhH
Q 039402 986 STLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAW 1065 (1496)
Q Consensus 986 ~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 1065 (1496)
.
T Consensus 272 --------------------------------------------~----------------------------------- 272 (530)
T COG0488 272 --------------------------------------------A----------------------------------- 272 (530)
T ss_pred --------------------------------------------h-----------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHH
Q 039402 1066 QVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIA 1145 (1496)
Q Consensus 1066 ~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~ 1145 (1496)
...++++
T Consensus 273 -------------------~~~~~k~------------------------------------------------------ 279 (530)
T COG0488 273 -------------------AASKAKK------------------------------------------------------ 279 (530)
T ss_pred -------------------ccchHHH------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHh--hcC
Q 039402 1146 AAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQY--TCI 1223 (1496)
Q Consensus 1146 ~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~--~~~ 1223 (1496)
.+..+...+|+.+- ...
T Consensus 280 -------------------------------------------------------------a~sr~k~l~k~~~~~~~~~ 298 (530)
T COG0488 280 -------------------------------------------------------------AKSRIKRLEKLEARLAEER 298 (530)
T ss_pred -------------------------------------------------------------HHHHHHHHHHHHhhhhhcc
Confidence 00000011111110 001
Q ss_pred CCCCCCCcc-CCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCcc
Q 039402 1224 PSEPPLAIE-ESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAG 1302 (1496)
Q Consensus 1224 ~~E~~~~~~-~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G 1302 (1496)
|.+...... ...+++.-+.+-.++++|+++.|.++ .++++++||.|.+|+||||||+||+|||||+++|.|-..|.+|
T Consensus 299 ~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G 377 (530)
T COG0488 299 PVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSG 377 (530)
T ss_pred cccccccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCc
Confidence 111000000 00011111224469999999999765 5699999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCChHHHhcccEEEcccc-cccc-cchhhccCCCC-CCcHHHHHHHHHHcCCcHHHHhccCCcccccccC
Q 039402 1303 QILIDGIDISLIGLHDLRSRLSIIPQDP-VMFE-GTVRSNLDPLE-ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTEN 1379 (1496)
Q Consensus 1303 ~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~-gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~ 1379 (1496)
+|.+.- .-++||.+|+- .++. .|+-+++.... +..+.++...|.+.++...-... +|
T Consensus 378 ~v~~g~-----------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~~~------~v--- 437 (530)
T COG0488 378 TVKVGE-----------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGEDQEK------PV--- 437 (530)
T ss_pred eEEeCC-----------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHHHhC------ch---
Confidence 999863 23699999997 4443 38999987543 44588999999999986543322 22
Q ss_pred CCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeE
Q 039402 1380 GENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLI 1458 (1496)
Q Consensus 1380 G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~I 1458 (1496)
..||||||-|+.||+.++.+|.+|||||||.+||.+|-..+.++|.++ +.|||+|+|+-..+.. |++|+++++ ++
T Consensus 438 -~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~ 513 (530)
T COG0488 438 -GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KV 513 (530)
T ss_pred -hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ce
Confidence 469999999999999999999999999999999999999999999876 5699999999999987 999999999 88
Q ss_pred eEe-cChhhHhhc
Q 039402 1459 EEF-DNPANLLEN 1470 (1496)
Q Consensus 1459 vE~-g~p~~Ll~~ 1470 (1496)
.++ |++++..+.
T Consensus 514 ~~~~g~y~~y~~~ 526 (530)
T COG0488 514 EEFEGGYEDYLEQ 526 (530)
T ss_pred eEcCCCHHHHHHh
Confidence 888 888887754
No 94
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.2e-54 Score=597.15 Aligned_cols=475 Identities=20% Similarity=0.192 Sum_probs=364.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHH
Q 039402 364 FRLQQLGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGI 442 (1496)
Q Consensus 364 ~~~~~~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~ 442 (1496)
+...+.+.+.-..+...+|++.++.+...+++.++|+++|+++.|++.+.+.+. .+..+....+.+++.+++++...++
T Consensus 947 ~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~ 1026 (1490)
T TIGR01271 947 LPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPY 1026 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677777888888999999999999999999999999999999998654 4445555555555555555544444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 443 ASLAALFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVY 522 (1496)
Q Consensus 443 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~ 522 (1496)
.+++.+.++++...+..++.+..++.++.....+....+...|.++|+.+||.|++|+.|.++..+.-+...+.......
T Consensus 1027 l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~ 1106 (1490)
T TIGR01271 1027 IFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLS 1106 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333444445555566666677778888999999999999999999999998887654432211111111
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 039402 523 TSAISSFVFWG-APTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDL 601 (1496)
Q Consensus 523 ~~~~~~~~~~~-~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~ 601 (1496)
...+....... ...++..+++ ..+.....++|.+-.++++...+..++..+...+..+..+.+|++||.+|++.++.
T Consensus 1107 ~~~wl~~~~~~i~~~~~~~~~~--l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e 1184 (1490)
T TIGR01271 1107 TLRWFQMRIDIIFVFFFIAVTF--IAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQE 1184 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 11111111100 0011111111 11112234566666666677777888888888899999999999999999976543
Q ss_pred CCcccc--------------C-C-C-CCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHH
Q 039402 602 QPDLVE--------------K-Q-P-SGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLS 664 (1496)
Q Consensus 602 ~~~~~~--------------~-~-~-~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~ 664 (1496)
.+...+ . . + .-+..+.|+++|++|+|+.+ .+++|+|+||+|++||++||||++|||||||++
T Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~ 1263 (1490)
T TIGR01271 1185 EPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLS 1263 (1490)
T ss_pred cccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHH
Confidence 221100 0 0 0 01223579999999999743 468999999999999999999999999999999
Q ss_pred HHhcCCCCCccEEEEcCe-------------eEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCC
Q 039402 665 CILGEVPKISGTLKLCGT-------------KAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFG 731 (1496)
Q Consensus 665 ~ilG~~~~~~G~i~~~g~-------------~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g 731 (1496)
+|+|+++ .+|+|.++|. ++||||+|.+|+|||||||....++++++..++++.|++.+.++.+|.|
T Consensus 1264 lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~G 1342 (1490)
T TIGR01271 1264 ALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDK 1342 (1490)
T ss_pred HHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccc
Confidence 9999997 7999999984 5999999999999999999877778899999999999999999999999
Q ss_pred CcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEE
Q 039402 732 DQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLI 811 (1496)
Q Consensus 732 ~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i 811 (1496)
.+|.+||+|.+||||||||++|||||+++|+|+|||||||+||+++.+.|. +.++...+++|||+|||+++.+..+|+|
T Consensus 1343 Ldt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~-~~L~~~~~~~TvI~IaHRl~ti~~~DrI 1421 (1490)
T TIGR01271 1343 LDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIR-KTLKQSFSNCTVILSEHRVEALLECQQF 1421 (1490)
T ss_pred cccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHhCCEE
Confidence 999999999999999999999999999999999999999999999988885 5566667899999999999999999999
Q ss_pred EEEeCCeEEEecChHHHHhcCcchHHHHHHhH
Q 039402 812 LVMKDGKITQAGKYNDLINSGTDFMELVGAHE 843 (1496)
Q Consensus 812 ~~l~~G~i~~~G~~~~l~~~~~~~~~~~~~~~ 843 (1496)
++|++|+|++.|+++++++.++.|.+++....
T Consensus 1422 lvL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1422 LVIEGSSVKQYDSIQKLLNETSLFKQAMSAAD 1453 (1490)
T ss_pred EEEECCEEEEeCCHHHHHcCCcHHHHHHHHhC
Confidence 99999999999999999987778888876543
No 95
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=8.8e-56 Score=567.59 Aligned_cols=511 Identities=13% Similarity=0.082 Sum_probs=400.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 927 VPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGS----TLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFN 1002 (1496)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~----~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 1002 (1496)
..+.+++.++...+.+..++++....+.....+. .... .++.++++++++..+..++...+......+..+.+|+
T Consensus 98 l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~-~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 98 LILIAFLLVSRTYLSVYVATLDGQIESSIVRRSP-RNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566667777778877755432110110 0011 1222333344445555555666666667777788888
Q ss_pred HHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHH
Q 039402 1003 EMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQ-VAWQVFIVFVPAVGSCIWY 1081 (1496)
Q Consensus 1003 ~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~ip~~~l~~~~ 1081 (1496)
+.+++....++.|||. ++|++++|+++|++.+...+...+..++..++.+++.++.+.. .+|.+.++++...++..++
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8888877888889987 8999999999999999999999999999999999988887775 8898888877777788888
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 039402 1082 QQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSI 1161 (1496)
Q Consensus 1082 ~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~ 1161 (1496)
.+++.+..+++.+......+.+.+.+.|.++|+.+||+|+.++.+.+++.+..++..+..........++....+++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 88888888888888888999999999999999999999999999999999888888887777777777776666665432
Q ss_pred HHH---H-HHHHHHHhc----CCCCCHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCC-
Q 039402 1162 TFA---F-TLVFLISIP----KGFIDPAI-AGLAVTY---GLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPP- 1228 (1496)
Q Consensus 1162 ~~~---~-~~~~~~~~~----~g~~~~g~-~gl~l~y---~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~- 1228 (1496)
... . .....+... .|.++.|. ++..++| ..++...+..+...+.++.....+.+|+.++.+.++|..
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~ 415 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKS 415 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 1 111112222 25677664 3434444 456677888899999999999999999999986533210
Q ss_pred ------CCcc--CC-----CCC------CCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHH
Q 039402 1229 ------LAIE--ES-----RPN------DSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTL 1289 (1496)
Q Consensus 1229 ------~~~~--~~-----~~~------~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTL 1289 (1496)
...+ +. .++ ......+.|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKSTL 494 (659)
T TIGR00954 416 GNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSSL 494 (659)
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHHH
Confidence 0000 00 000 000134679999999999644 469999999999999999999999999999
Q ss_pred HHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCC--------CCCcHHHHHHHHHHcCC
Q 039402 1290 IQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPL--------EESTDEQIWEALDKCQL 1361 (1496)
Q Consensus 1290 l~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--------~~~sd~eI~~aL~~~~L 1361 (1496)
+++|.|+++|++|+|.+|+ |++++++||+|.+|++|+|+|+... .+.++++++++++++++
T Consensus 495 l~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 495 FRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred HHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999874 6789999999999999999999632 24678899999999999
Q ss_pred cHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCc
Q 039402 1362 GDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRI 1441 (1496)
Q Consensus 1362 ~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl 1441 (1496)
.+++.. |.|+|+..+ .+.+||||||||++||||++++|++||||||||+||+++++.+++.+++. ++|+|+||||+
T Consensus 564 ~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~ 639 (659)
T TIGR00954 564 THILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRK 639 (659)
T ss_pred HHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCch
Confidence 999877 899999876 56799999999999999999999999999999999999999999999874 89999999999
Q ss_pred chhcccCEEEEEeC
Q 039402 1442 TSVIDSDLVLLLNH 1455 (1496)
Q Consensus 1442 ~ti~~~DrIlVL~~ 1455 (1496)
+++..||+|++|+.
T Consensus 640 ~~~~~~d~il~l~~ 653 (659)
T TIGR00954 640 SLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHhCCEEEEEeC
Confidence 99999999999973
No 96
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3e-57 Score=570.67 Aligned_cols=191 Identities=23% Similarity=0.330 Sum_probs=163.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.++++|++++|.. ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5999999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEcccccc-cccchhhccCCC-CCC-cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 039402 1325 IIPQDPVM-FEGTVRSNLDPL-EES-TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS 1401 (1496)
Q Consensus 1325 iIpQdp~L-F~gTIR~NLdp~-~~~-sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~ 1401 (1496)
|+||++.+ ++.|+++|+... ..+ .+..+.++|+..++.+...+. ...||||||||++|||||+++|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~-----------~~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLDKN-----------VKDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHhCC-----------cccCCHHHHHHHHHHHHHhcCC
Confidence 99999875 466999999632 122 234567788888886543322 3468999999999999999999
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecC
Q 039402 1402 KILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDN 1463 (1496)
Q Consensus 1402 ~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~ 1463 (1496)
+||||||||++||.++...+.+.|++..+ ++|||+|+|++..+.. ||||++|++ ++...|+
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999999998643 7899999999999876 999999965 8877766
No 97
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=6.5e-54 Score=543.37 Aligned_cols=508 Identities=15% Similarity=0.139 Sum_probs=366.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 291 LIKAMFCSVWKDVLVTGFLTVLYTLASYVG-PYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLVECLCQRFRVFRLQQL 369 (1496)
Q Consensus 291 l~~al~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 369 (1496)
+++.+++.+++.++...++.++..++.++. |++.+.+++.+... ....+.+++.+++.. ++.....+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 75 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTS---LLVLPEFLGLLLLLM----AVTLGSQLALTTL 75 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---chHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 567778888888998888999988888774 77778888765321 111111111111111 2233444556667
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 039402 370 GIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYIHDPWLVLFEVALSILILYKNLGIASLAALF 449 (1496)
Q Consensus 370 ~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~ 449 (1496)
+.++...++..+|+|.++++....+++++|+++|++++|++.+..++..+..++...+.+++++++++..-+..+++.++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 155 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAI 155 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 78888888999999999999999999999999999999999999876556667777777777777666655555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 450 GTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQG--WEMKFLSKIINLRKRETGWLKKYVYTSAIS 527 (1496)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~--wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~ 527 (1496)
++++...+...+.++..+..++.++..+++.+.+.|.++|++++++.+ .++.+.+++.+..++..+...+........
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (547)
T PRK10522 156 WMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSA 235 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 555556666777788888888899999999999999999999997433 233445555443322221111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCc
Q 039402 528 SFVFWGAPTFVSVATFGTCILLNVP---LESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPD 604 (1496)
Q Consensus 528 ~~~~~~~p~~v~~~~f~~~~~~~~~---L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~ 604 (1496)
.... .++..+.++.+++.++. .+.+.+..+..+...+..|+..+...+..+.+++.+++|+.+++..++.++.
T Consensus 236 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~ 311 (547)
T PRK10522 236 VNWS----NIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF 311 (547)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 1111 11111122222222211 2222222222233346689999999999999999999999999755432211
Q ss_pred cccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--
Q 039402 605 LVEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-- 682 (1496)
Q Consensus 605 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-- 682 (1496)
. ...+. +....++++|++|+|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 312 ~-~~~~~-~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~ 387 (547)
T PRK10522 312 P-RPQAF-PDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPV 387 (547)
T ss_pred c-ccccc-CcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEC
Confidence 1 11111 11236999999999962 357999999999999999999999999999999999999999999999884
Q ss_pred -----------eEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 683 -----------KAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 683 -----------~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
++||+|+|.+|++|++|| +...++++.+++++.+++..+++. +.|. .+|.+||||||||+
T Consensus 388 ~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq~qRl 458 (547)
T PRK10522 388 TAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQKKRL 458 (547)
T ss_pred CCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHHHHHH
Confidence 589999999999999999 445666777777777777655542 2221 24889999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCccccCCEEEEEeCCeEEEe
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPAADLILVMKDGKITQA 822 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 822 (1496)
+||||++++|+++|||||||+||+++++.+.+.+.+... +++|+|+|||+++.+..||+|++|++|++++.
T Consensus 459 ~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 459 ALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999988765544332 48999999999999989999999999999876
No 98
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-53 Score=556.15 Aligned_cols=491 Identities=18% Similarity=0.215 Sum_probs=379.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHH
Q 039402 974 LAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRI 1053 (1496)
Q Consensus 974 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~ 1053 (1496)
..++.+++.--..+.....|.+.-..+-..++++.+|..-.--..+.+|+|+|-++.|.+.+++...+. ..+...-+++
T Consensus 251 ~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~-h~~w~~Plqi 329 (1381)
T KOG0054|consen 251 ASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFL-HLLWSAPLQI 329 (1381)
T ss_pred HHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHH-HHHHHHHHHH
Confidence 334444443334444557777777788888888888888877778889999999999999999876553 3333344444
Q ss_pred HHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHH
Q 039402 1054 LGTIAVMSQ-VAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMK 1132 (1496)
Q Consensus 1054 l~~~~~~~~-~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~ 1132 (1496)
+..+.++.. +.|. +++.+.++++++-++.+.-+..+..++.....+..-....+|.++|+++||.|+||+.|.++..+
T Consensus 330 ~~~l~lLy~~LG~s-a~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~ 408 (1381)
T KOG0054|consen 330 ILALYLLYGLLGPS-ALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIED 408 (1381)
T ss_pred HHHHHHHHHHhChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHH
Confidence 444433332 2222 22222233344444445555555566666667777788899999999999999999999999887
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 039402 1133 LMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKII 1212 (1496)
Q Consensus 1133 ~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~ 1212 (1496)
.-++-.+.............+.......++.+++....+....+..+|..+-.++++.-.+..++..+-.....+-+..+
T Consensus 409 ~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~V 488 (1381)
T KOG0054|consen 409 LRQKELKLLRKSAYLSALNSFLNFFSPVLVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKV 488 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665554444333333333332222222222222222214456678878888888887777778777777888888899
Q ss_pred HHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHH
Q 039402 1213 SVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQ 1291 (1496)
Q Consensus 1213 sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~ 1291 (1496)
|++|+.+|+..++..+...+. .+.-+.+-.|+++|.++++.++ .++.|+||||+|++||.+||||++|||||||++
T Consensus 489 S~~Ri~~fl~~~e~~~~~~~~---~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~ 565 (1381)
T KOG0054|consen 489 SLKRLKEFLLSEELDPDSVER---SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLS 565 (1381)
T ss_pred HHHHHHHHhcCcccCcccccc---CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHH
Confidence 999999999766544322211 1122345579999999999763 445999999999999999999999999999999
Q ss_pred HHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCC
Q 039402 1292 TLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGK 1371 (1496)
Q Consensus 1292 ~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~g 1371 (1496)
+++|-.+..+|++.++|. ++|+||.|-+|+|||||||-...+++++.-.++++.|+|...++.+|.|
T Consensus 566 AiLGEm~~~sG~v~v~gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~G 632 (1381)
T KOG0054|consen 566 AILGEMPKLSGSVAVNGS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFG 632 (1381)
T ss_pred HHhcCcccccceEEEcCe-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCC
Confidence 999999999999999984 9999999999999999999988899999999999999999999999999
Q ss_pred cccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHH-HHHHHHHHhcCCcEEEEEccCcchhcccCEE
Q 039402 1372 LDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDN-LIQQTLRQHFSDCTVLTIAHRITSVIDSDLV 1450 (1496)
Q Consensus 1372 Ldt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~-~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrI 1450 (1496)
=.|.|||+|.|||||||||++||||++++++|.+||+|-|+||.++.+ ..++.|+...+++|+|.+||.++.+.+||+|
T Consensus 633 D~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~I 712 (1381)
T KOG0054|consen 633 DLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQI 712 (1381)
T ss_pred CcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEE
Confidence 999999999999999999999999999999999999999999999965 5567888888999999999999999999999
Q ss_pred EEEeCCeEeEecChhhHhhcCCcHHHHHHHHHh
Q 039402 1451 LLLNHGLIEEFDNPANLLENKSSSFSQLVAEYT 1483 (1496)
Q Consensus 1451 lVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~ 1483 (1496)
+||++|+|+|.|+++||++ .++.|.+|..+..
T Consensus 713 ivl~~G~I~~~Gty~el~~-~~~~~~~l~~~~~ 744 (1381)
T KOG0054|consen 713 IVLKDGKIVESGTYEELLK-SGGDFAELAHEEE 744 (1381)
T ss_pred EEecCCeEecccCHHHHHh-cchhHHHHhhccc
Confidence 9999999999999999995 4678888865443
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-55 Score=522.75 Aligned_cols=444 Identities=25% Similarity=0.357 Sum_probs=335.9
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
..++++|++.+|+ ..++|+|+||++.+||++|++|+||||||||+|.|.|.++|++|+|.++|+
T Consensus 7 ~ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 7 PLLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAA 83 (500)
T ss_pred ceeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhC
Confidence 3588999999996 568999999999999999999999999999999999999999999999995
Q ss_pred -eEEEccCCccC-CCcHHHHhccCCCCC-------HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 -KAYVAQSPWIQ-SGKIEDNILFGKEMN-------RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 -~~yv~Q~~~i~-~~ti~eNI~~g~~~~-------~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
|+.|+|++.+. +.||.|||.+|++.. ..+.++..+ +.++.+....+ ......+||+||||-|+|
T Consensus 84 GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~-----~~l~~lg~~~~--~~~~v~~LsiaqrQ~VeI 156 (500)
T COG1129 84 GIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRAR-----ELLARLGLDID--PDTLVGDLSIAQRQMVEI 156 (500)
T ss_pred CcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHH-----HHHHHcCCCCC--hhhhhhhCCHHHHHHHHH
Confidence 48999999875 669999999987532 222222111 11222222111 456678999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecCh-HHHHhc
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKY-NDLINS 831 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~-~~l~~~ 831 (1496)
|||++.+++|+|||||||+|+.+..+++|+.+.+...+|.++|+|||+++++.. ||+|.||+||+.+..++. .++
T Consensus 157 ArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~--- 233 (500)
T COG1129 157 ARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAET--- 233 (500)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCC---
Confidence 999999999999999999999999999997554444579999999999999866 999999999999875431 100
Q ss_pred CcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccchH
Q 039402 832 GTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKVGF 911 (1496)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~ 911 (1496)
..++ ++
T Consensus 234 -------------------------------------------------------~~~~-------lv------------ 239 (500)
T COG1129 234 -------------------------------------------------------SEDE-------LV------------ 239 (500)
T ss_pred -------------------------------------------------------CHHH-------HH------------
Confidence 0000 00
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 912 SVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLLAT 991 (1496)
Q Consensus 912 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~~~ 991 (1496)
+..
T Consensus 240 -------~~M---------------------------------------------------------------------- 242 (500)
T COG1129 240 -------RLM---------------------------------------------------------------------- 242 (500)
T ss_pred -------HHh----------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 039402 992 AGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFIVF 1071 (1496)
Q Consensus 992 ~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1071 (1496)
+||
T Consensus 243 -----------------------------vGr------------------------------------------------ 245 (500)
T COG1129 243 -----------------------------VGR------------------------------------------------ 245 (500)
T ss_pred -----------------------------hCc------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 039402 1072 VPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWL 1151 (1496)
Q Consensus 1072 ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1151 (1496)
++
T Consensus 246 -------------------~~----------------------------------------------------------- 247 (500)
T COG1129 246 -------------------EL----------------------------------------------------------- 247 (500)
T ss_pred -------------------ch-----------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCc
Q 039402 1152 GLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPLAI 1231 (1496)
Q Consensus 1152 ~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~ 1231 (1496)
+ ..| |. ++
T Consensus 248 ---------------------------------------------------------------~--~~~---~~-~~--- 255 (500)
T COG1129 248 ---------------------------------------------------------------E--DLF---PE-PP--- 255 (500)
T ss_pred ---------------------------------------------------------------h--hhc---cc-cc---
Confidence 0 000 00 00
Q ss_pred cCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeC
Q 039402 1232 EESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDI 1311 (1496)
Q Consensus 1232 ~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI 1311 (1496)
++ -+..-.++++|++..- .++|+||++++||.+||.|-=|||+|-++++|||.-++.+|+|.+||.++
T Consensus 256 ----~~--~~~~~~l~v~~l~~~~------~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v 323 (500)
T COG1129 256 ----EE--GIGEPVLEVRNLSGGG------KVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPV 323 (500)
T ss_pred ----cc--CCCCcEEEEecCCCCC------ceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEc
Confidence 00 0112246777776421 58999999999999999999999999999999999999999999999988
Q ss_pred CCCChH-HHhcccEEEccccc---cc-ccchhhccCCC--CCCcHH-HHHHHHHHcCCcHHHHhc---cCCcccccccCC
Q 039402 1312 SLIGLH-DLRSRLSIIPQDPV---MF-EGTVRSNLDPL--EESTDE-QIWEALDKCQLGDEVRKK---EGKLDSKVTENG 1380 (1496)
Q Consensus 1312 ~~i~l~-~LR~~i~iIpQdp~---LF-~gTIR~NLdp~--~~~sd~-eI~~aL~~~~L~~~i~~l---p~gLdt~v~e~G 1380 (1496)
.--+++ ..+..|+|||-|-- +| .-+|++|+... ..++.. -+...-++.-..++++++ ....+.+ -
T Consensus 324 ~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~----v 399 (500)
T COG1129 324 RIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP----I 399 (500)
T ss_pred cCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch----h
Confidence 877765 58899999998863 44 55999999632 111100 122222222233344433 1233333 3
Q ss_pred CCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeE
Q 039402 1381 ENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLI 1458 (1496)
Q Consensus 1381 ~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~I 1458 (1496)
.+||||.+|+++|||.|..+|+||||||||.++|..+.+.|.+.|++.. ++.+||+|+-.++.+.. ||||+||.+|+|
T Consensus 400 ~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri 479 (500)
T COG1129 400 GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRI 479 (500)
T ss_pred hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEE
Confidence 5799999999999999999999999999999999999999999999876 57999999999999984 999999999999
Q ss_pred eEecChhh
Q 039402 1459 EEFDNPAN 1466 (1496)
Q Consensus 1459 vE~g~p~~ 1466 (1496)
+..=+.++
T Consensus 480 ~~e~~~~~ 487 (500)
T COG1129 480 VGELDREE 487 (500)
T ss_pred EEEecccc
Confidence 97544443
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.2e-51 Score=529.49 Aligned_cols=503 Identities=17% Similarity=0.158 Sum_probs=372.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 302 DVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRD--FENEGYVLVSAFCVAKLVECLCQRFRVFRLQQLGIRMRAALIA 379 (1496)
Q Consensus 302 ~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~--~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~ir~~L~~ 379 (1496)
.++...++.++.+++....|++++.+++.+...+. +....+.+++++++..++.++... ...++..++|..+..
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~----~~~~~~~~~r~~l~~ 172 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKY----LLKELKLRFRVRLTR 172 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 46677888889999999999999999998765432 111112222233333344444443 344555555555555
Q ss_pred HHHHHHhc----CCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHH
Q 039402 380 MIYNKGLT----LSSQAKQGQSSGEIINFMTVDAERVADFSW-YIHDPWLVLFEVALSILILYKNLGIAS-LAALFGTVI 453 (1496)
Q Consensus 380 ~iy~K~L~----ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~~~lL~~~lg~~~-l~~l~~~~~ 453 (1496)
.++++.++ .+....++ ++|++++++++|++.+.+.+. .+..+...++.++.+++.++..+++.. ++.++.+++
T Consensus 173 ~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l 251 (659)
T TIGR00954 173 YLYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFA 251 (659)
T ss_pred HHHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 55555544 33333333 579999999999999998654 445556666777777777776566543 444455566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 454 VMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAISSFVFWG 533 (1496)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~ 533 (1496)
...+...+.+...+..++..+..++-....+|.++|+++||.|+-|+.+.+++.+.-++..+...+.....+....+...
T Consensus 252 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 331 (659)
T TIGR00954 252 TGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNI 331 (659)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 66677778888899999999999999999999999999999999999998888776666555555555444443333222
Q ss_pred HH----HHHHHHHHHHHHHh-c----CCcCHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 039402 534 AP----TFVSVATFGTCILL-N----VPLESGKMLS-AI---ATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDD 600 (1496)
Q Consensus 534 ~p----~~v~~~~f~~~~~~-~----~~L~~~~vft-~l---~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e 600 (1496)
.. ..+..+..+..++. . +.+|.|..+. ++ .++..+..|+..+.+.+..+.++.++.+|+.++++.++
T Consensus 332 i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~ 411 (659)
T TIGR00954 332 VAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLD 411 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 11222222232332 1 5688887654 33 34667789999999999999999999999999996432
Q ss_pred CCC------ccccC-----------------CCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCC
Q 039402 601 LQP------DLVEK-----------------QPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGS 657 (1496)
Q Consensus 601 ~~~------~~~~~-----------------~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~Gs 657 (1496)
... ..... .........++++|++|+|+. ++++|+|+||++++||+++|+|||||
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 412 DVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred HHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCCCEEEEECCCCC
Confidence 100 00000 000012245999999999852 35799999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCccEEEEcC--eeEEEccCCccCCCcHHHHhccCC--------CCCHHHHHHHHHHhchhhHHHh
Q 039402 658 GKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQSGKIEDNILFGK--------EMNRERYNAVLDACSLKKDLEI 727 (1496)
Q Consensus 658 GKSTLl~~ilG~~~~~~G~i~~~g--~~~yv~Q~~~i~~~ti~eNI~~g~--------~~~~~~~~~v~~~~~l~~d~~~ 727 (1496)
|||||+++|+|+++|++|+|.+++ .++||||+|+++++|++|||.++. ..++++..++++.+++.+.++.
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 999999999999999999999875 589999999999999999999874 2456677888999999887776
Q ss_pred ccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc
Q 039402 728 LSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA 807 (1496)
Q Consensus 728 l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~ 807 (1496)
|.|.+|..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+. +.. .|+|+|+|||+++.++.
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~-l~~--~~~tvI~isH~~~~~~~ 644 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRL-CRE--FGITLFSVSHRKSLWKY 644 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHH--cCCEEEEEeCchHHHHh
Confidence 889999876 5789999999999999999999999999999999999998888654 333 38999999999999989
Q ss_pred CCEEEEEeC
Q 039402 808 ADLILVMKD 816 (1496)
Q Consensus 808 ~d~i~~l~~ 816 (1496)
||++++|+.
T Consensus 645 ~d~il~l~~ 653 (659)
T TIGR00954 645 HEYLLYMDG 653 (659)
T ss_pred CCEEEEEeC
Confidence 999999973
No 101
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=7.8e-54 Score=497.77 Aligned_cols=440 Identities=23% Similarity=0.374 Sum_probs=343.1
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
..+++++.+..|+ +..+++||||+|++||++|++|+||+|||||+++|.|.++|++|+|.++|+
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~ 79 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRL 79 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHc
Confidence 4689999999996 567999999999999999999999999999999999999999999999996
Q ss_pred -eEEEccCCccC-CCcHHHHhccCCCC------CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 683 -KAYVAQSPWIQ-SGKIEDNILFGKEM------NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 683 -~~yv~Q~~~i~-~~ti~eNI~~g~~~------~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
||+|.|++-+. +.|+.|||..|.+- +. ++.++..+.+++.-| ..++..+||-|||||
T Consensus 80 GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vd-----------p~~~V~dLsVG~qQR 148 (501)
T COG3845 80 GIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVD-----------PDAKVADLSVGEQQR 148 (501)
T ss_pred CCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCC-----------ccceeecCCcchhHH
Confidence 58999999886 45999999999753 22 233333344443322 346678999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHH
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLI 829 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~ 829 (1496)
|.|-+|||++|+++|||||||.|-|...+++|+.+-+....|+|||+|||.++++.. ||++-||++|+++..-+ ..
T Consensus 149 VEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~--~~- 225 (501)
T COG3845 149 VEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD--PV- 225 (501)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec--CC-
Confidence 999999999999999999999999999999997655555679999999999999876 99999999999764321 00
Q ss_pred hcCcchHHHHHHhHHHHhhhCCCCCCCCccCCCCCCCCccccccchhhhccccCCCCchhhhhhhccchhHHHHHhhccc
Q 039402 830 NSGTDFMELVGAHEQALLALGSIEGRPASERASGENGGTVIANRIVKEVENNKGQNDKADEVAVSKGQLVQEEEREKGKV 909 (1496)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v 909 (1496)
. + . .. ++-.
T Consensus 226 -----------------------------------~-~-------------~-----t~-------------~ela---- 234 (501)
T COG3845 226 -----------------------------------A-E-------------T-----TE-------------EELA---- 234 (501)
T ss_pred -----------------------------------C-C-------------C-----CH-------------HHHH----
Confidence 0 0 0 00 0000
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 910 GFSVYWKYITTAFGGALVPFILLAQTLFQILQIASNYWIVWATPGTKDVKPVVTGSTLLIVYVALAVGSSFCVLARSTLL 989 (1496)
Q Consensus 910 ~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~vy~~l~~~~~~~~~~~~~~~ 989 (1496)
. + +
T Consensus 235 ----------~--------l-M---------------------------------------------------------- 237 (501)
T COG3845 235 ----------E--------L-M---------------------------------------------------------- 237 (501)
T ss_pred ----------H--------H-h----------------------------------------------------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 039402 990 ATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAFSIIRILGTIAVMSQVAWQVFI 1069 (1496)
Q Consensus 990 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1069 (1496)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 039402 1070 VFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAME 1149 (1496)
Q Consensus 1070 ~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1149 (1496)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhcCCCCCCC
Q 039402 1150 WLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTCIPSEPPL 1229 (1496)
Q Consensus 1150 wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1229 (1496)
. ...+. .+.+
T Consensus 238 -----------------------v-G~~v~-------------------------------------------~~~~--- 247 (501)
T COG3845 238 -----------------------V-GREVV-------------------------------------------LRVV--- 247 (501)
T ss_pred -----------------------c-CCccc-------------------------------------------cccc---
Confidence 0 00000 0000
Q ss_pred CccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCe
Q 039402 1230 AIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI 1309 (1496)
Q Consensus 1230 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1309 (1496)
. ++.-|..-.++++|+++.-+.+ -+.+++|||++++||.+||.|-.|.|-+.|+.+|.|+..|.+|+|.++|.
T Consensus 248 -----~-~~~~pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~ 320 (501)
T COG3845 248 -----K-PPSTPGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGK 320 (501)
T ss_pred -----c-CCCCCCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCE
Confidence 0 1111334468999999976543 35799999999999999999999999999999999999999999999999
Q ss_pred eC-CCCChHHHh-cccEEEccccc----ccccchhhccCCCCCC----------cHHHHHHHHHHcCCcHHHHh---ccC
Q 039402 1310 DI-SLIGLHDLR-SRLSIIPQDPV----MFEGTVRSNLDPLEES----------TDEQIWEALDKCQLGDEVRK---KEG 1370 (1496)
Q Consensus 1310 dI-~~i~l~~LR-~~i~iIpQdp~----LF~gTIR~NLdp~~~~----------sd~eI~~aL~~~~L~~~i~~---lp~ 1370 (1496)
|+ ...+....| ..+++||.|.. ..+-|+.+|+-+.... .-.++.+..+ +.+++ .+.
T Consensus 321 ~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~-----~li~~fdVr~~ 395 (501)
T COG3845 321 DVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAR-----ELIEEFDVRAP 395 (501)
T ss_pred eccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHH-----HHHHHcCccCC
Confidence 97 677877765 46999999984 5667999998532211 1123332221 12222 123
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cC
Q 039402 1371 KLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SD 1448 (1496)
Q Consensus 1371 gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~D 1448 (1496)
+.+++ ..+||||+.|++-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +++.|+.|+-.|+.+.. ||
T Consensus 396 ~~~~~----a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsD 471 (501)
T COG3845 396 SPDAP----ARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSD 471 (501)
T ss_pred CCCcc----hhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhh
Confidence 33333 35799999999999999999999999999999999999999999998865 68999999999999987 99
Q ss_pred EEEEEeCCeEeEecChhh
Q 039402 1449 LVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1449 rIlVL~~G~IvE~g~p~~ 1466 (1496)
||.||.+|+++....|++
T Consensus 472 rIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 472 RIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred eeeeeeCCceeccccccc
Confidence 999999999999888776
No 102
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.8e-54 Score=496.15 Aligned_cols=238 Identities=35% Similarity=0.661 Sum_probs=229.4
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
|.|+|+|++++|+++.+++|+|+||+|++||++||+|+||||||||+++|+|+++ ++|+|+|||.|+.+++.+++|++|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999998666679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCE
Q 039402 1324 SIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKI 1403 (1496)
Q Consensus 1324 ~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~I 1403 (1496)
+||||+|.+|++|+++|++|+...+++++|++++.+++.+++.++|++||+.++|+|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999887889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHHHh
Q 039402 1404 LMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAEYT 1483 (1496)
Q Consensus 1404 LiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~~~ 1483 (1496)
|||||||++||+.+++.+++.|++.+++||||+||||++++..||||+||++|+|+|+|+|++|+++ .+.|++++.+..
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 9999999999999999999999998889999999999999999999999999999999999999985 589999998776
No 103
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-51 Score=465.58 Aligned_cols=468 Identities=21% Similarity=0.295 Sum_probs=368.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 039402 369 LGIRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYI-HDPWLVLFEVALSILILYKNLGIASLAA 447 (1496)
Q Consensus 369 ~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~~~~~lL~~~lg~~~l~~ 447 (1496)
++......+.-..|++.++|+.....+..+|.+---+..-..-|+...+++ ..+....+++++..++++...||.....
T Consensus 9 v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~ 88 (497)
T COG5265 9 VGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALT 88 (497)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHH
Confidence 344444556677799999999988888888877666666566666665543 3344556788888888888888655444
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039402 448 LF-GTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEMKFLSKIINLRKRETGWLKKYVYTSAI 526 (1496)
Q Consensus 448 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~~~~~~i~~~R~~E~~~l~~~~~~~~~ 526 (1496)
.+ .+++...+.......-..+++++.++-.+-.....+.|-|..++|.|+-|+.+..+..+..+...+...|......+
T Consensus 89 t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~ 168 (497)
T COG5265 89 TLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLV 168 (497)
T ss_pred HHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHH
Confidence 44 44444444444445555566665555555567778999999999999999998888766554444333332222222
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCc
Q 039402 527 SSFVFW--GAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPD 604 (1496)
Q Consensus 527 ~~~~~~--~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~ 604 (1496)
.++... .+..+....+.+..-+..+.+|.|.+....++...+..|+..+......+.|++...+++.+.+..+-...+
T Consensus 169 Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d 248 (497)
T COG5265 169 LNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSD 248 (497)
T ss_pred HHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhcc
Confidence 221110 011122223334444567889999999999999999999999999999999999999999888765433222
Q ss_pred cccCCCCC-CCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-
Q 039402 605 LVEKQPSG-SSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT- 682 (1496)
Q Consensus 605 ~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~- 682 (1496)
.....+-. .....+.+++++|.|++ .+++|+++||++++|+.++||||+|+||||++++|.+++++.+|.|.++|+
T Consensus 249 ~pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qd 326 (497)
T COG5265 249 APDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQD 326 (497)
T ss_pred CCCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchh
Confidence 21111111 23457999999999974 579999999999999999999999999999999999999999999999995
Q ss_pred ------------eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHH
Q 039402 683 ------------KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 749 (1496)
Q Consensus 683 ------------~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 749 (1496)
+|.|||+.-+||.|+..||.+|++ ..++...++.++.++++.++.+|+|++|.+||+|-.||||+||
T Consensus 327 ir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekq 406 (497)
T COG5265 327 IRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQ 406 (497)
T ss_pred HHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHH
Confidence 599999999999999999999987 5667777889999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHH
Q 039402 750 RIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLI 829 (1496)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~ 829 (1496)
||++||+++++|+|++|||.|||||.||++.| +..++...+|+|.++|.|+++.+-.||.|+||++|+|++.|+|+|++
T Consensus 407 rvaiar~ilk~p~il~~deatsaldt~te~~i-q~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll 485 (497)
T COG5265 407 RVAIARTILKNPPILILDEATSALDTHTEQAI-QAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELL 485 (497)
T ss_pred HHHHHHHHhcCCCEEEEehhhhHhhhhHHHHH-HHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHH
Confidence 99999999999999999999999999999888 55677777899999999999999999999999999999999999999
Q ss_pred hcCcchHHHH
Q 039402 830 NSGTDFMELV 839 (1496)
Q Consensus 830 ~~~~~~~~~~ 839 (1496)
..++.|.+++
T Consensus 486 ~~~g~ya~mw 495 (497)
T COG5265 486 AAGGLYAEMW 495 (497)
T ss_pred HcCChHHHHh
Confidence 9999888875
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-50 Score=475.36 Aligned_cols=258 Identities=21% Similarity=0.408 Sum_probs=223.2
Q ss_pred HhHhHHHHHHHhhcCCCCCCCCcc------CCCC---CCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEE
Q 039402 1209 NKIISVERIFQYTCIPSEPPLAIE------ESRP---NDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIV 1279 (1496)
Q Consensus 1209 ~~~~sveRi~~~~~~~~E~~~~~~------~~~~---~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIV 1279 (1496)
..+.+++|+.+|...+.|.....+ +..+ +..||..+.|+|+|++++|+++.+++|+|+||+|++||++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~Iv 114 (329)
T PRK14257 35 QKLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFI 114 (329)
T ss_pred hccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEE
Confidence 456778888888777665432111 1111 3469999999999999999765567999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCC--CCChHHHhcccEEEcccccccccchhhccC--C-CCCCcH
Q 039402 1280 GRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDIS--LIGLHDLRSRLSIIPQDPVMFEGTVRSNLD--P-LEESTD 1349 (1496)
Q Consensus 1280 GrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~--~i~l~~LR~~i~iIpQdp~LF~gTIR~NLd--p-~~~~sd 1349 (1496)
||||||||||+++|+|+++ |++|+|.|||+||. .+++.++|++++||||+|.+|++|+++||+ | +..+++
T Consensus 115 G~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~ 194 (329)
T PRK14257 115 GPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGIND 194 (329)
T ss_pred CCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCCh
Confidence 9999999999999999997 57999999999997 456788999999999999999999999998 3 234555
Q ss_pred HHH-----HHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHH
Q 039402 1350 EQI-----WEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQT 1424 (1496)
Q Consensus 1350 ~eI-----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~ 1424 (1496)
++. .++++.+++.+ ++++.+++.|.+||||||||+|||||++++|+||||||||++||+++++.+++.
T Consensus 195 ~~~~~~~~~~~l~~~~L~~-------~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~ 267 (329)
T PRK14257 195 RKILEKIVEKSLKSAALWD-------EVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL 267 (329)
T ss_pred HHHHHHHHHHHHHHcCCcc-------hhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 554 55678887643 456778899999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCc
Q 039402 1425 LRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSS 1473 (1496)
Q Consensus 1425 I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s 1473 (1496)
|++.++++|+|+|||+++++.+ ||||+||++|+|+|.|+|+++++++..
T Consensus 268 i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~~ 317 (329)
T PRK14257 268 ILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPKN 317 (329)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCc
Confidence 9999999999999999999998 999999999999999999999976653
No 105
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6.6e-46 Score=431.59 Aligned_cols=193 Identities=19% Similarity=0.346 Sum_probs=163.1
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|.++||+|+|.++. ..+++++|-|.++++|++|||+|+|||||++++.+.+.|+.|.+.-.-.. +++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cch
Confidence 599999999998764 79999999999999999999999999999999999999999987654322 233
Q ss_pred EEcc---cccccccchhhccCC-CC-CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1325 IIPQ---DPVMFEGTVRSNLDP-LE-ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1325 iIpQ---dp~LF~gTIR~NLdp-~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
.--| |-...+-|.-+|+.| +. +-..+++...|.++||....+..| + ++||+|||.|+++||.+++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p------~----~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVP------M----SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccc------h----hhcccccchhHHHHHHHhc
Confidence 3333 345566777788765 34 356678889999999975443333 2 5799999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEe
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~ 1461 (1496)
+|.||||||||++||.+|-....++|++. +.+||+|+|+...|.. +++|++.++|.+..+
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 99999999999999999999999999876 5699999999999987 999999999998875
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-45 Score=406.39 Aligned_cols=225 Identities=29% Similarity=0.458 Sum_probs=197.8
Q ss_pred EEEEeEEeEeCCC---CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC---hHHH
Q 039402 1246 IDLLDLQVRYAPQ---MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG---LHDL 1319 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~---~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---l~~L 1319 (1496)
|+++||++.|... ...+|+||||+|++||..||||+||||||||++++-+|-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999763 356999999999999999999999999999999999999999999999999988876 6667
Q ss_pred hcccEEEcccccccc-cchhhccC-CCC--CCcHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1320 RSRLSIIPQDPVMFE-GTVRSNLD-PLE--ESTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1320 R~~i~iIpQdp~LF~-gTIR~NLd-p~~--~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
|++||+|+|.+-|++ -|+.+|+. |+. ..+.+ .+.+.|+.+||.|.-..-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 899999999999998 69999997 543 34444 4567899999887766555 57899999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
+|||||..+|+||+.|||||+|||+|.+.|.+.|++.- -+-|+++|||-++.|++ ||||.||++|+|+|.|+-.+++
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999888754 37899999999999998 9999999999999999999999
Q ss_pred hcCCc-HHHHHHHH
Q 039402 1469 ENKSS-SFSQLVAE 1481 (1496)
Q Consensus 1469 ~~~~s-~F~~l~~~ 1481 (1496)
.++.. .=++++.+
T Consensus 231 ~~Pk~~~t~~fi~~ 244 (339)
T COG1135 231 ANPKHAITQEFIGE 244 (339)
T ss_pred cCcchHHHHHHHHh
Confidence 98754 33445543
No 107
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.4e-44 Score=415.00 Aligned_cols=240 Identities=50% Similarity=0.823 Sum_probs=224.7
Q ss_pred CcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhc
Q 039402 1242 SHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRS 1321 (1496)
Q Consensus 1242 ~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~ 1321 (1496)
..|.|+++|++++|+.....+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754356999999999999999999999999999999999999999999999999999998889999
Q ss_pred ccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 039402 1322 RLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS 1401 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~ 1401 (1496)
+++++||+|.+|++|+++|+++.....+++++++++.+++.+.+..+|.|+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555667889999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHHH
Q 039402 1402 KILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVAE 1481 (1496)
Q Consensus 1402 ~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~~ 1481 (1496)
++|||||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||||++|++|++++.|+++++.+.+++.|+.++.+
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999998767899999999999999999999999999999999999998877888887653
No 108
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-45 Score=381.59 Aligned_cols=216 Identities=28% Similarity=0.441 Sum_probs=194.1
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCC-CChHHHhccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL-IGLHDLRSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~-i~l~~LR~~i 1323 (1496)
-|+++||+.+|... .||||||++|++||.+.|+||||||||||+++|.+|-+|++|+|.|||.++.. .++..+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999754 59999999999999999999999999999999999999999999999987743 3788999999
Q ss_pred EEEccccccccc-chhhccCCCC----CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLE----EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
|+|+|...||+- |+-+|+.... ..+ .+.-.+.|++++|.|.....|. +|||||+||++||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHHH
Confidence 999999999977 9999996321 222 2334567999999998888775 5699999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCC
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKS 1472 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~ 1472 (1496)
|||.-+|+|+++|||||+|||+.-..+.+.+++.. .+-|+|+|||.+....+ +|||+.||+|+|+|.|+|++++.++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999999876 46799999999999988 99999999999999999999998876
Q ss_pred c
Q 039402 1473 S 1473 (1496)
Q Consensus 1473 s 1473 (1496)
+
T Consensus 229 ~ 229 (240)
T COG1126 229 S 229 (240)
T ss_pred C
Confidence 4
No 109
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-44 Score=421.70 Aligned_cols=264 Identities=24% Similarity=0.322 Sum_probs=221.3
Q ss_pred cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCccEEEEeeEEEecC
Q 039402 550 NVPLESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDLVEKQPSGSSETALDIVDGNFSWDI 629 (1496)
Q Consensus 550 ~~~L~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 629 (1496)
.+++++..+|+.+++|+.+..|+..+|..... .+|+..|+..++.+...... ..+....++++|++++|..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~nls~~y~~ 92 (329)
T PRK14257 22 LNELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--DFNHANVFEIRNFNFWYMN 92 (329)
T ss_pred cchhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--CCCcCceEEEEeeEEEecC
Confidence 35789999999999999999999988865443 56999998776644321111 1123357999999999963
Q ss_pred CCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcC---------------eeEEEccC
Q 039402 630 SSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG---------------TKAYVAQS 689 (1496)
Q Consensus 630 ~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g---------------~~~yv~Q~ 689 (1496)
..+++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++| .++||||+
T Consensus 93 -~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~ 171 (329)
T PRK14257 93 -RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQK 171 (329)
T ss_pred -CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecC
Confidence 24579999999999999999999999999999999999996 5799998765 36899999
Q ss_pred CccCCCcHHHHhccCCCC---C-HH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCC
Q 039402 690 PWIQSGKIEDNILFGKEM---N-RE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDS 761 (1496)
Q Consensus 690 ~~i~~~ti~eNI~~g~~~---~-~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 761 (1496)
||++++|++|||.|+..+ + ++ .+.++++.|++.+++ ++.+++++.+|||||||||+||||++++|
T Consensus 172 ~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l-------~~~~~~~~~~LSgGqkqRl~LARAl~~~p 244 (329)
T PRK14257 172 PTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEV-------KDDLDKAGNALSGGQQQRLCIARAIALEP 244 (329)
T ss_pred CccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchh-------hhhhhCCcccCCHHHHHHHHHHHHHHhCC
Confidence 999999999999987432 2 22 256677788775544 36788999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 762 DIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 762 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
+|+||||||+|||+++.+++ .+++..+.+++|+|+|||+++++.. ||+|++|++|+|++.|+++++...
T Consensus 245 ~IlLLDEPts~LD~~~~~~i-~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 245 EVLLMDEPTSALDPIATAKI-EELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred CEEEEeCCcccCCHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999998885 5677777778999999999999887 999999999999999999998754
No 110
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.8e-43 Score=401.47 Aligned_cols=234 Identities=32% Similarity=0.526 Sum_probs=215.9
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EcccccccccchhhccCCCC-CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEE
Q 039402 1326 IPQDPVMFEGTVRSNLDPLE-ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKIL 1404 (1496)
Q Consensus 1326 IpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~IL 1404 (1496)
+||+|.+|+.|+++||.... ..+.+++.++++..++.+.+..+|.|+++.....+.+||+|||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999997533 34566788888999999999999999999888999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHH
Q 039402 1405 MLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVA 1480 (1496)
Q Consensus 1405 iLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~ 1480 (1496)
||||||++||+.+.+.+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|++++++++ .+.|+.+++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 999999999999999999999998778999999999999988999999999999999999999965 577777664
No 111
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-44 Score=374.42 Aligned_cols=203 Identities=30% Similarity=0.426 Sum_probs=173.8
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.|+++|++.+|. +..+|+|||++|++||.++|||||||||||||+||.|+.+|++|+|.++|.
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 478999999996 568999999999999999999999999999999999999999999999993
Q ss_pred eEEEccCCccCC-CcHHHHhccCC----CCCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGK----EMNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~----~~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
+|+|+|+..+|. .|+.|||..+. ...++ +..+.++..+|.+-. ...+.+|||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka-----------~~yP~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKA-----------DAYPAQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhh-----------hhCccccCcHHHHHHHH
Confidence 479999999986 59999999874 22322 222334444444333 45668999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
||||..+|+++|+|||||||||+...++.+-.......|.|.|+|||++.|.+. ||||+.|++|+|+++|+++++..+.
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999998876544455679999999999999987 9999999999999999999998664
Q ss_pred c
Q 039402 833 T 833 (1496)
Q Consensus 833 ~ 833 (1496)
.
T Consensus 228 ~ 228 (240)
T COG1126 228 K 228 (240)
T ss_pred C
Confidence 3
No 112
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.6e-43 Score=395.90 Aligned_cols=221 Identities=61% Similarity=1.001 Sum_probs=209.8
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
|.|+++|++++|+....++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56999999999975445699999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCE
Q 039402 1324 SIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKI 1403 (1496)
Q Consensus 1324 ~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~I 1403 (1496)
+++||+|.+|++|+++|++++...+++++.++++..++.+.+..+|.|+++...+.+.+||+|||||++||||++++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998777778899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecCh
Q 039402 1404 LMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNP 1464 (1496)
Q Consensus 1404 LiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p 1464 (1496)
|+|||||++||+.+.+.+.+.|++..++.|||+++|+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999988778999999999999999999999999999998864
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-43 Score=369.97 Aligned_cols=220 Identities=27% Similarity=0.449 Sum_probs=198.8
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCc-----cEEEECCeeCCC--CCh
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAA-----GQILIDGIDISL--IGL 1316 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~-----G~I~IDG~dI~~--i~l 1316 (1496)
..++++||++-|.. ..+|+|||+.|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 359999999999999999999999999999999999999875 999999999976 578
Q ss_pred HHHhcccEEEcccccccccchhhccCCCC---C----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1317 HDLRSRLSIIPQDPVMFEGTVRSNLDPLE---E----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1317 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
-.||+++|+|.|.|.-|+.||+||+.... . .-|+-+.++|+++.|||.|... | .+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDr---L----~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDR---L----HKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHH---h----hCCccCCChhHHH
Confidence 89999999999999999999999997431 1 2245578899999999998754 3 3456789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
||||||||.-+|+||+||||||+|||.+...|.+.|.+..++-||++|||.+.-... +|+...+..|+++|+|..+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999889999999999988766 9999999999999999999999
Q ss_pred hcCC
Q 039402 1469 ENKS 1472 (1496)
Q Consensus 1469 ~~~~ 1472 (1496)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8764
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-42 Score=371.96 Aligned_cols=217 Identities=28% Similarity=0.454 Sum_probs=195.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+|+||+++|.+ ..+++|+||+|++||.+.++|+|||||||+++++.|+++|++|+|+|||.||++++..+||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999984 459999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eccccccccc-chhhccCCC---CCCc----HHHHHHHHHHcCCcH--HHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPL---EEST----DEQIWEALDKCQLGD--EVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~--~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
|-|..-||+- ||.+|+..- ...+ ++++.|-|+.++|.. +....| ..|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHHH
Confidence 9999999976 999999632 2233 455677888999863 555555 457999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCC
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKS 1472 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~ 1472 (1496)
||..+|+||+||||.++||+-|+..+|+-+.+.-+ ++|+|+|||+++.... +|||.||++|+|+.+|+|+++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 99999999999999999999999999998876543 7899999999987654 99999999999999999999999987
Q ss_pred cHH
Q 039402 1473 SSF 1475 (1496)
Q Consensus 1473 s~F 1475 (1496)
..|
T Consensus 229 n~F 231 (309)
T COG1125 229 NDF 231 (309)
T ss_pred HHH
Confidence 766
No 115
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.9e-42 Score=394.88 Aligned_cols=194 Identities=21% Similarity=0.307 Sum_probs=168.0
Q ss_pred CcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhc
Q 039402 1242 SHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRS 1321 (1496)
Q Consensus 1242 ~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~ 1321 (1496)
+...+++.+|+|.|.|+.++.++++++.++.-+|+++||.+|+||||+++++.+-.+|..|.+-+.+ |.
T Consensus 359 ~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 3457999999999999887899999999999999999999999999999999999999999998886 78
Q ss_pred ccEEEcccccccccchhhcc---C----CCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1322 RLSIIPQDPVMFEGTVRSNL---D----PLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~gTIR~NL---d----p~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
||++-.|--+=| ..-|. | -++.-+++|+.+.|...|+...+...+ -..||||||-|+++|
T Consensus 428 ri~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA 494 (582)
T KOG0062|consen 428 RIKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFA 494 (582)
T ss_pred eecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHH
Confidence 999999976643 22332 1 123348999999999998876554432 146899999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEe
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~ 1461 (1496)
-....+|.+|||||||..||.++-..+-++|+.. +.-||+|+|+.+.|.. |+.++|.++|+|.-+
T Consensus 495 ~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 495 ACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred HHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 9999999999999999999999999999999875 4479999999999987 999999999999873
No 116
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-42 Score=388.44 Aligned_cols=231 Identities=33% Similarity=0.529 Sum_probs=212.2
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+....++++|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997543359999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEE
Q 039402 1326 IPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKIL 1404 (1496)
Q Consensus 1326 IpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~IL 1404 (1496)
+||+|.+|++|+++|+... ..++.+++.+.++.+++.+.+..+|.|+++.......+||+|||||++|||||+++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999754 234566777888999999999999999999998889999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHH
Q 039402 1405 MLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQ 1477 (1496)
Q Consensus 1405 iLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~ 1477 (1496)
+|||||++||+.+...+.+.|++..++.|||+++|+++.+..||+|++|++|++++.|+++++.++ .+.|+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~ 232 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAK 232 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhh
Confidence 999999999999999999999988788999999999999989999999999999999999999865 455554
No 117
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.5e-42 Score=381.06 Aligned_cols=207 Identities=59% Similarity=0.990 Sum_probs=189.9
Q ss_pred CCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH
Q 039402 1240 WPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL 1319 (1496)
Q Consensus 1240 wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L 1319 (1496)
||..+.++++|++++|+....++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+..++
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543469999999999999999999999999999999999999999999999999998888889
Q ss_pred hcccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1320 RSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1320 R~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
|++++++||+|.+|++|+++|+..+..++++++.++++ +......||+|||||++||||+++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999998765556666666554 234567899999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecCh
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNP 1464 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p 1464 (1496)
+|+||||||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||+|++|++|++++.|+|
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999998778999999999999988999999999999998875
No 118
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=384.89 Aligned_cols=226 Identities=39% Similarity=0.612 Sum_probs=210.0
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
|.|+++|++++|... .++++|+||+|++||++||+|++|||||||+++|.|+++|.+|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 469999999999643 3599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcccccccccchhhccCCCC-CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 039402 1324 SIIPQDPVMFEGTVRSNLDPLE-ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSK 1402 (1496)
Q Consensus 1324 ~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ 1402 (1496)
+|+||+|.+|++|+++|+.... ...++++.++++.+++.+.+..+|.|+++.++....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997543 345678888999999999999999999999998999999999999999999999999
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1403 ILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1403 ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
+|+|||||++||+.+.+.+.+.|++..+++|||+|+|+++.+..||+|++|++|++++.|++++++++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999987678999999999999988999999999999999999888754
No 119
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-41 Score=385.09 Aligned_cols=233 Identities=36% Similarity=0.592 Sum_probs=214.5
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+.+ ..+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+++..+...+|+.+++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999643 359999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEE
Q 039402 1326 IPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKIL 1404 (1496)
Q Consensus 1326 IpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~IL 1404 (1496)
+||+|.+|++|+++|+... ...+++++.++++.+++.+.+..+|.|+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999743 345677888999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHHH
Q 039402 1405 MLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLVA 1480 (1496)
Q Consensus 1405 iLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~~ 1480 (1496)
||||||++||+++...+.+.|++..++.|||+++|+++.+..||++++|++|++++.|+++++.++ .+.|+.++.
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~ 234 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWK 234 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHh
Confidence 999999999999999999999987668899999999999999999999999999999999999864 566766554
No 120
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.9e-41 Score=383.60 Aligned_cols=233 Identities=34% Similarity=0.616 Sum_probs=211.4
Q ss_pred EEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1246 IDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 5789999999653 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCE
Q 039402 1325 IIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKI 1403 (1496)
Q Consensus 1325 iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~I 1403 (1496)
++||+|.+|+.|+++|+... .....+++.+.++.+++.+.+..+|.|+++.......+||+|||||++||||++++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999753 33456678888999999999999999999999888999999999999999999999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHHH
Q 039402 1404 LMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQLV 1479 (1496)
Q Consensus 1404 LiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l~ 1479 (1496)
|||||||++||+.+.+.+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|+++++.+. .+..++++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHh
Confidence 9999999999999999999999987678999999999999989999999999999999999999864 44444443
No 121
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.7e-41 Score=400.62 Aligned_cols=223 Identities=27% Similarity=0.453 Sum_probs=194.2
Q ss_pred EEEEeEEeEeCCC--CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH---Hh
Q 039402 1246 IDLLDLQVRYAPQ--MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LR 1320 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~--~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1320 (1496)
|+++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEcccccccc-cchhhccC-CC--CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1321 SRLSIIPQDPVMFE-GTVRSNLD-PL--EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1321 ~~i~iIpQdp~LF~-gTIR~NLd-p~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
++|++|||++.+|. .|+++|+. |. ...+ ++++.++|+.+++.+.....| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999995 69999996 22 1222 345778899999887655443 468999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||||+.+|+||+||||||+||+.|...|.+.|++..+ +.|||+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998754 7899999999999976 99999999999999999999987
Q ss_pred cCCcHH-HHHH
Q 039402 1470 NKSSSF-SQLV 1479 (1496)
Q Consensus 1470 ~~~s~F-~~l~ 1479 (1496)
++...+ +.++
T Consensus 231 ~p~~~~~~~~~ 241 (343)
T TIGR02314 231 HPKTPLAQKFI 241 (343)
T ss_pred CCCcHHHHHHH
Confidence 765444 3444
No 122
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.9e-41 Score=377.12 Aligned_cols=219 Identities=36% Similarity=0.551 Sum_probs=201.6
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
|.|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999965334699999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEcccccccccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 039402 1324 SIIPQDPVMFEGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSK 1402 (1496)
Q Consensus 1324 ~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ 1402 (1496)
+++||+|.+|..|+++|+... ...+++++.++++..++.+.+...|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999989999999753 2345667888999999999999999999999998899999999999999999999999
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEec
Q 039402 1403 ILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1403 ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g 1462 (1496)
+|||||||++||+++...+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988779999999999998764
No 123
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.7e-41 Score=379.98 Aligned_cols=211 Identities=33% Similarity=0.526 Sum_probs=186.6
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc-----CCCccEEEECCeeCCCCC--hHH
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIV-----EPAAGQILIDGIDISLIG--LHD 1318 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~-----ep~~G~I~IDG~dI~~i~--l~~ 1318 (1496)
|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.+||.++...+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 5789999999643 5999999999999999999999999999999999999 999999999999998876 667
Q ss_pred HhcccEEEcccccccccchhhccCCCC---C-C----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1319 LRSRLSIIPQDPVMFEGTVRSNLDPLE---E-S----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1319 LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
+|++++++||+|.+|..|+++|+.... . . .++++.++++.+++.+...+.++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 889999999999999889999996421 1 1 23567888999988766544321 46799999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
++||||++++|++|+|||||++||+++.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+|+++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999988666899999999999875 999999999999999998764
No 124
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-41 Score=361.59 Aligned_cols=225 Identities=29% Similarity=0.437 Sum_probs=190.5
Q ss_pred eEEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC-hHHHhc
Q 039402 1245 KIDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG-LHDLRS 1321 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~-l~~LR~ 1321 (1496)
.++++|+++.|+... -++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.+..... ....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997543 25999999999999999999999999999999999999999999999997765543 346788
Q ss_pred ccEEEcccccc-c--ccchhhccC-CCCC----CcHHHHHHHHHHcCCcHHHH-hccCCcccccccCCCCCCchHHHHHH
Q 039402 1322 RLSIIPQDPVM-F--EGTVRSNLD-PLEE----STDEQIWEALDKCQLGDEVR-KKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1322 ~i~iIpQdp~L-F--~gTIR~NLd-p~~~----~sd~eI~~aL~~~~L~~~i~-~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
.+.+|+|||.- + .-||++-|. |... -..++++++|+.+||.+... ..| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 89999999962 2 236776664 4332 23456999999999976553 444 357999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCc--EEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDC--TVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~--TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||||.-+|++||+|||||+||.-..+.|.+.+.+.-+++ |.|+|+|++..+.. ||||+||++|+++|.++-+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999998877655 99999999999988 99999999999999999999998
Q ss_pred cCCcHHHHHHH
Q 039402 1470 NKSSSFSQLVA 1480 (1496)
Q Consensus 1470 ~~~s~F~~l~~ 1480 (1496)
.+...|.+..-
T Consensus 232 ~~~h~ytr~Ll 242 (252)
T COG1124 232 HPSHPYTRELL 242 (252)
T ss_pred CCccHHHHHHH
Confidence 75555554443
No 125
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-40 Score=383.49 Aligned_cols=222 Identities=26% Similarity=0.359 Sum_probs=199.9
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC-------------ee
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g-------------~~ 683 (1496)
.++++|+++.|+.+ ..++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++| .+
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 48899999999632 4579999999999999999999999999999999999998 799999998 26
Q ss_pred EEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 039402 684 AYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDI 763 (1496)
Q Consensus 684 ~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1496)
+||||+|++|++|++||+....+.+++++.++++.+++.+.+..+|.+++|.+++.|.+||||||||++||||++.+|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999964444667788889999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchHHHHHH
Q 039402 764 YLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFMELVGA 841 (1496)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~~~~~ 841 (1496)
+||||||++||+.+.+.+.+ .+....+++|+|+|||+++.+..||+|++|++|++++.|++++++++...|.+++..
T Consensus 160 lllDEpts~LD~~~~~~l~~-~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRK-TLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred EEEECccccCCHHHHHHHHH-HHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 99999999999999887754 555555689999999999998889999999999999999999999876666666543
No 126
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-41 Score=394.96 Aligned_cols=218 Identities=25% Similarity=0.357 Sum_probs=185.5
Q ss_pred cceEEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCC-----
Q 039402 1243 HGKIDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----- 1314 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----- 1314 (1496)
...|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 34699999999997432 3599999999999999999999999999999999999999999999999998753
Q ss_pred -----------ChHHHhcccEEEcccc--cccccchhhccCCCC---CCcHHH----HHHHHHHcCCcHHHHhccCCccc
Q 039402 1315 -----------GLHDLRSRLSIIPQDP--VMFEGTVRSNLDPLE---ESTDEQ----IWEALDKCQLGDEVRKKEGKLDS 1374 (1496)
Q Consensus 1315 -----------~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd~e----I~~aL~~~~L~~~i~~lp~gLdt 1374 (1496)
....+|++++++||+| .+|++|+++|+.... ..++++ +.++++.+++.+ .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~ 168 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----------S 168 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------h
Confidence 3567899999999998 699999999996321 223333 334455555431 2
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhc-ccCEEEE
Q 039402 1375 KVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVI-DSDLVLL 1452 (1496)
Q Consensus 1375 ~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~-~~DrIlV 1452 (1496)
.....+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+. .||+|+|
T Consensus 169 ~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~v 248 (320)
T PRK13631 169 YLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIV 248 (320)
T ss_pred HhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEE
Confidence 2455677899999999999999999999999999999999999999999998753 4789999999999885 5999999
Q ss_pred EeCCeEeEecChhhHhhc
Q 039402 1453 LNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1453 L~~G~IvE~g~p~~Ll~~ 1470 (1496)
|++|++++.|+|++++++
T Consensus 249 l~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 249 MDKGKILKTGTPYEIFTD 266 (320)
T ss_pred EECCEEEEeCCHHHHhcC
Confidence 999999999999998754
No 127
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-41 Score=366.68 Aligned_cols=190 Identities=37% Similarity=0.467 Sum_probs=163.2
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------eEEEcc
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVAQ 688 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------~~yv~Q 688 (1496)
.+.+++++.+|.. ..+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|+ ++||+|
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 4788999999963 68999999999999999999999999999999999999999999999884 599999
Q ss_pred CCccCCC-cHHHHhccCCCCC-------HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC
Q 039402 689 SPWIQSG-KIEDNILFGKEMN-------RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 760 (1496)
Q Consensus 689 ~~~i~~~-ti~eNI~~g~~~~-------~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1496)
++-++.- ||+|||.||.+.. +++..+.++.++|...- +..+.+|||||||||+|||||..+
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~-----------~~~P~qLSGGMrQRVaiARAL~~~ 148 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFE-----------DKYPHQLSGGMRQRVAIARALATR 148 (248)
T ss_pred cCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchh-----------hcCccccChHHHHHHHHHHHHhcC
Confidence 9887764 9999999987642 23455566666665443 355689999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeC--CeEE
Q 039402 761 SDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKD--GKIT 820 (1496)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~--G~i~ 820 (1496)
|+|+||||||+|||+.|+.++.+++.+... .++||++||||+++.-. +|||++|.+ |+|.
T Consensus 149 P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 149 PKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999999999777666554 37999999999988654 999999998 4453
No 128
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-40 Score=356.16 Aligned_cols=223 Identities=28% Similarity=0.480 Sum_probs=196.9
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH---HHh
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLR 1320 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR 1320 (1496)
-.|++++|+++|... .||+||+|+|++||..||+|+||||||||++++.|+..|++|+|.|+|.||.+++-+ .+|
T Consensus 7 ~~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 469999999999654 599999999999999999999999999999999999999999999999999999854 569
Q ss_pred cccEEEccccccccc-chhhccC-CCCCC---cHHHHH----HHHHHcCCcHHH-HhccCCcccccccCCCCCCchHHHH
Q 039402 1321 SRLSIIPQDPVMFEG-TVRSNLD-PLEES---TDEQIW----EALDKCQLGDEV-RKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1321 ~~i~iIpQdp~LF~g-TIR~NLd-p~~~~---sd~eI~----~aL~~~~L~~~i-~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
+++|++.|.--||+. ||+||+. |..+| +++++. .-|+.+||...+ ...| +.||||.|.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999987 9999997 55554 444443 458888888773 3444 4689999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
++||||+.-+|+||++|||||++||.+...|-+.|++.. -+.|+|+|||+++++.. ||||+++.+|+|+-.|+|++|
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999888754 37899999999999987 899999999999999999999
Q ss_pred hhcCCcHHHHHH
Q 039402 1468 LENKSSSFSQLV 1479 (1496)
Q Consensus 1468 l~~~~s~F~~l~ 1479 (1496)
.+.++-..++.+
T Consensus 234 ~~sd~P~v~qf~ 245 (263)
T COG1127 234 LASDDPWVRQFF 245 (263)
T ss_pred HhCCCHHHHHHh
Confidence 988776655544
No 129
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.4e-41 Score=372.25 Aligned_cols=213 Identities=32% Similarity=0.503 Sum_probs=188.8
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.++++|++++|.. .++|+|+||+|++||.++|+||||||||||+++|.|+..|.+|+|++||.||.+++..++-++++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 4789999999973 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccccc-ccccchhhccC----C----CCCCc--HH-HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1325 IIPQDPV-MFEGTVRSNLD----P----LEEST--DE-QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1325 iIpQdp~-LF~gTIR~NLd----p----~~~~s--d~-eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
|+||++. -|.-||+|-+. | +...+ |+ .+.+||+.+++.++..+. + ..||||||||++
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~---~--------~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP---V--------DELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc---c--------cccChhHHHHHH
Confidence 9999975 45559988774 3 22222 33 477889999998775432 2 458999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchh-cccCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSV-IDSDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti-~~~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||||.++|+||+|||||++||....-.|.+.+++.. ++.|||+|.|+++.. +.||++++|++|+|+..|+|++.+.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999876 369999999999775 5699999999999999999999986
Q ss_pred c
Q 039402 1470 N 1470 (1496)
Q Consensus 1470 ~ 1470 (1496)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 4
No 130
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=378.11 Aligned_cols=219 Identities=24% Similarity=0.424 Sum_probs=194.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCccEEEECCeeCCCCChHHHhc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE---PAAGQILIDGIDISLIGLHDLRS 1321 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~LR~ 1321 (1496)
.|+++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.|+...+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999964 469999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ccEEEcccccccccchhhccCCCC---------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1322 RLSIIPQDPVMFEGTVRSNLDPLE---------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~gTIR~NLdp~~---------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
+++|+||+|.+|..|+++|+.... ...++++.++++.+++.+.+..+ ..+.+.+||+|||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHHH
Confidence 999999999999999999996421 11234578889999987655432 33456789999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcC
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~ 1471 (1496)
||||++++|++|+|||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999999987778999999999998865 9999999999999999999998654
Q ss_pred C
Q 039402 1472 S 1472 (1496)
Q Consensus 1472 ~ 1472 (1496)
.
T Consensus 233 ~ 233 (246)
T PRK14269 233 K 233 (246)
T ss_pred C
Confidence 3
No 131
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-40 Score=371.38 Aligned_cols=215 Identities=30% Similarity=0.475 Sum_probs=195.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCC-CCChHHHhccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS-LIGLHDLRSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~-~i~l~~LR~~i 1323 (1496)
.|+++|++++|.++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999887 77999999999999999999999999999999999999999999999999999 48899999999
Q ss_pred EEEcccc--cccccchhhccCCCC---CCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDP--VMFEGTVRSNLDPLE---ESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
|+|.|+| .+|..||.+.+.... ..+. +.+.++|+.+++.+.....| .+||||||||++||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999997432 2333 34778899999987744443 57899999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCC--cEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcC
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSD--CTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~--~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~ 1471 (1496)
.+|..+|+|||||||||+||+...+.+.+.+++..++ .|+|+|+|+++.+.+ |||++||++|+++.+|+|++++++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 9999999999999999999999999999999987644 699999999999998 9999999999999999999999764
No 132
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-41 Score=358.37 Aligned_cols=203 Identities=29% Similarity=0.416 Sum_probs=173.3
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~ 684 (1496)
|+++|+++.|. ++.+++|+||+|++||+++++|||||||||+|++|.++++|++|+|.++|. +|
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 68999999996 578999999999999999999999999999999999999999999999994 59
Q ss_pred EEccCCccCC-CcHHHHhccCCC---CCHHHHH----HHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHH
Q 039402 685 YVAQSPWIQS-GKIEDNILFGKE---MNRERYN----AVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 756 (1496)
Q Consensus 685 yv~Q~~~i~~-~ti~eNI~~g~~---~~~~~~~----~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 756 (1496)
||-|+.-+|. .||.|||..-.. +++++.+ +.++..+|++ .....+.+.+|||||+|||.+|||
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p---------~~~~~RyP~eLSGGQQQRVGv~RA 149 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDP---------SEYADRYPHELSGGQQQRVGVARA 149 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCH---------HHHhhcCchhcCcchhhHHHHHHH
Confidence 9999999874 699999987542 4555443 3444444432 112356789999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcc-ccCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 757 LYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFL-PAADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
|..+|+|+|+||||+||||-++..+-++..+... -++|+|+||||+++. +.+|||.+|++|+|++.+++++++.+.
T Consensus 150 LAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 150 LAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 9999999999999999999999998666554333 389999999999885 569999999999999999999998764
No 133
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-39 Score=409.10 Aligned_cols=199 Identities=27% Similarity=0.338 Sum_probs=166.5
Q ss_pred CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC--CCccEEEECCeeCCCCChHHHhcccEEEcccc-cccc
Q 039402 1258 QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE--PAAGQILIDGIDISLIGLHDLRSRLSIIPQDP-VMFE 1334 (1496)
Q Consensus 1258 ~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~ 1334 (1496)
+....|+|||=-++||--+|++|.||||||||++.|.+-.. ..+|+|+|||.+..+ +..++++|||-|++ ++=+
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44568999999999999999999999999999999998764 357999999998765 77999999999977 5656
Q ss_pred cchhhccCC------CCCCcHHH----HHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC-CE
Q 039402 1335 GTVRSNLDP------LEESTDEQ----IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS-KI 1403 (1496)
Q Consensus 1335 gTIR~NLdp------~~~~sd~e----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~-~I 1403 (1496)
-||||-|.. -.+.+++| +.++.+-.+|.+. =|..||.-|+-||..||.||.||--|+.|| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 699999842 13445544 4455555555433 356688888999999999999999999999 89
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchh--cccCEEEEEeC-CeEeEecChhh
Q 039402 1404 LMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSV--IDSDLVLLLNH-GLIEEFDNPAN 1466 (1496)
Q Consensus 1404 LiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti--~~~DrIlVL~~-G~IvE~g~p~~ 1466 (1496)
|.||||||+||+++...|.+++|+.. .|+||++.-|.++.. ..+|+++.|++ |+.|-+|++-+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999865 689999999999874 45999999986 69998887644
No 134
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-40 Score=377.09 Aligned_cols=212 Identities=28% Similarity=0.431 Sum_probs=186.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCCh---HHHhcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL---HDLRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR~~ 1322 (1496)
|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999964 359999999999999999999999999999999999999999999999999987764 567889
Q ss_pred cEEEccccccccc-chhhccCCC----CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHH
Q 039402 1323 LSIIPQDPVMFEG-TVRSNLDPL----EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCL 1393 (1496)
Q Consensus 1323 i~iIpQdp~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~L 1393 (1496)
++++||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+...+.+ .+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP-----------AELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHH
Confidence 9999999999986 999999632 1122 234677888888865543332 4689999999999
Q ss_pred HHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1394 GRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1394 ARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998653 7899999999999876 999999999999999999998754
No 135
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-40 Score=373.95 Aligned_cols=221 Identities=30% Similarity=0.511 Sum_probs=193.7
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.++++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+...+..++|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcccccccccchhhccCCCC---CCcHHHHHHHHHHcCCc-HHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccC
Q 039402 1325 IIPQDPVMFEGTVRSNLDPLE---ESTDEQIWEALDKCQLG-DEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKR 1400 (1496)
Q Consensus 1325 iIpQdp~LF~gTIR~NLdp~~---~~sd~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~ 1400 (1496)
++||+|.+|+.|+++|+.... ...++++.+.++..++. +... ....+||+|||||++||||++++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYAT-----------RDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhh-----------CCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999997422 22345677888888875 2222 23467999999999999999999
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHHHH
Q 039402 1401 SKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSFSQ 1477 (1496)
Q Consensus 1401 ~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~ 1477 (1496)
|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+|++++.++...+.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999999864 37899999999999876 9999999999999999999998765444544
Q ss_pred H
Q 039402 1478 L 1478 (1496)
Q Consensus 1478 l 1478 (1496)
.
T Consensus 230 ~ 230 (241)
T PRK14250 230 L 230 (241)
T ss_pred H
Confidence 3
No 136
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=366.49 Aligned_cols=209 Identities=31% Similarity=0.447 Sum_probs=183.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|... + ||+||||+|++||.+||+||||||||||+++++|++.|++|+|.++|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~-~-vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR-P-VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE-e-eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999865 4 9999999999999999999999999999999999999999999999988765433 67999
Q ss_pred EEcccc---cccccchhhccCCCC-----------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1325 IIPQDP---VMFEGTVRSNLDPLE-----------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1325 iIpQdp---~LF~gTIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
||||.. .-|+-||+|-+.... ..+.+++.+||+++++.++..+ ++ ..|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i----~~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QI----GELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------cc----cccCcHHHHH
Confidence 999955 358889999886421 1134789999999999877543 23 3589999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS-DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
+.|||||+.+|++|+|||||++||+.++..|.+.|++..+ +|||++|+|+++.+++ ||+|+.|+ +++.-.|+|++.+
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 9999999999999999999999999999999999998764 8999999999999987 99999995 5678899999998
Q ss_pred hc
Q 039402 1469 EN 1470 (1496)
Q Consensus 1469 ~~ 1470 (1496)
+.
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 64
No 137
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.9e-40 Score=372.36 Aligned_cols=217 Identities=35% Similarity=0.534 Sum_probs=198.1
Q ss_pred CcceEEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHh
Q 039402 1242 SHGKIDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLR 1320 (1496)
Q Consensus 1242 ~~g~I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR 1320 (1496)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999643 23699999999999999999999999999999999999999999999999999888878888
Q ss_pred cccEEEcccccccccchhhccCC-CCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1321 SRLSIIPQDPVMFEGTVRSNLDP-LEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1321 ~~i~iIpQdp~LF~gTIR~NLdp-~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
++++++||+|.+|++|+++|++. ......+++++..++.++.+.+..++.|+++.+.+...+||+|||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999984 33334556777777788889999998899988899999999999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeE
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLI 1458 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~I 1458 (1496)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|+|+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987777999999999999988999999999975
No 138
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=367.16 Aligned_cols=207 Identities=25% Similarity=0.342 Sum_probs=173.8
Q ss_pred EEEEeeEEEecCC--CCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 618 LDIVDGNFSWDIS--SHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~--~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
|+++++++.|... ...++|+||||+|++||+.+|+|.||+|||||+++|.++-.|++|+|.++|.
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999742 1246899999999999999999999999999999999999999999999993
Q ss_pred ---eEEEccCCccCC-CcHHHHhccCCC---CC-HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 683 ---KAYVAQSPWIQS-GKIEDNILFGKE---MN-RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 683 ---~~yv~Q~~~i~~-~ti~eNI~~g~~---~~-~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+|+++|++.+++ .||.|||.|..+ .. ++..++|.+.+.+ . |.....+..+.+|||||||||+||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLel------V--gL~dk~~~yP~qLSGGQKQRVaIA 153 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLEL------V--GLSDKADRYPAQLSGGQKQRVAIA 153 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHH------c--CChhhhccCchhcCcchhhHHHHH
Confidence 699999999987 799999999754 22 2333444443322 1 111223577899999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
|||..+|+|||.|||||||||+|.+.|.+.+..-- .-|-|+++|||.++.++. |||+.||++|+++++|+..++..+.
T Consensus 154 RALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~P 233 (339)
T COG1135 154 RALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANP 233 (339)
T ss_pred HHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCc
Confidence 99999999999999999999999999986443222 348999999999999987 9999999999999999999987654
No 139
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-40 Score=382.86 Aligned_cols=215 Identities=28% Similarity=0.422 Sum_probs=191.3
Q ss_pred eEEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1245 KIDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
.|+++||+++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999643 34599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcccc--cccccchhhccCCCC---CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDP--VMFEGTVRSNLDPLE---EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
+++||+| .++..||++||.... ..+ ++++.++++.+++.+.....| .+||+|||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 356779999997321 122 345788999999876655443 57899999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++++.|+++++.++
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998653 7899999999999988999999999999999999998764
No 140
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-40 Score=380.28 Aligned_cols=216 Identities=25% Similarity=0.455 Sum_probs=196.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++||+.+|.+.. +|+|+|++|+.||.+.++||||||||||+++|.||.+|++|+|.|||.|++++++.+ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 699999999997653 999999999999999999999999999999999999999999999999999998877 6899
Q ss_pred EEccccccccc-chhhccCC-CC------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVMFEG-TVRSNLDP-LE------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp-~~------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
+|+|+..||+. ||++||.. .. +--++++.++++..++.+.+..+|. .||||||||++||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 99999999987 99999973 22 1235678899999999999888885 569999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCc
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSS 1473 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s 1473 (1496)
|.++|++++||||.|+||......+...|++..+ +.|+|.|||+....+. +|||.||++|+|.+.|+|.++.+++..
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999998888887543 5799999999988776 999999999999999999999999887
Q ss_pred HH
Q 039402 1474 SF 1475 (1496)
Q Consensus 1474 ~F 1475 (1496)
.|
T Consensus 228 ~f 229 (338)
T COG3839 228 LF 229 (338)
T ss_pred hh
Confidence 76
No 141
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=375.56 Aligned_cols=221 Identities=29% Similarity=0.457 Sum_probs=192.6
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCC--CC
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IG 1315 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~ 1315 (1496)
.+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 467999999999964 359999999999999999999999999999999999986 589999999999864 45
Q ss_pred hHHHhcccEEEcccccccccchhhccCCC----CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1316 LHDLRSRLSIIPQDPVMFEGTVRSNLDPL----EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1316 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
...+|++++++||+|.+|..|+++|+... ...+ +++++++++.+++.+.+.. ...+...+||+||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKD-------KLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHH-------HHhcCCCCCCHHH
Confidence 66789999999999999999999999632 1122 3567888999888654332 2334567899999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhh
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
|||++||||++++|+||||||||++||+.+.+.+.+.|++..++.|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988677899999999999865 99999999999999999999
Q ss_pred HhhcCC
Q 039402 1467 LLENKS 1472 (1496)
Q Consensus 1467 Ll~~~~ 1472 (1496)
+++.+.
T Consensus 242 ~~~~~~ 247 (260)
T PRK10744 242 IFTKPA 247 (260)
T ss_pred HHhCCC
Confidence 986543
No 142
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.3e-40 Score=340.40 Aligned_cols=207 Identities=27% Similarity=0.397 Sum_probs=187.1
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH---Hhcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~ 1322 (1496)
|+|+||+.+|+.+ +++|+||||+|++||.+=++|+||||||||+++|++...|++|+|.++|.|++++.-++ ||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 8999999999877 78999999999999999999999999999999999999999999999999999987554 8999
Q ss_pred cEEEccccccccc-chhhccC-CCC--CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1323 LSIIPQDPVMFEG-TVRSNLD-PLE--EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1323 i~iIpQdp~LF~g-TIR~NLd-p~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
||+|.||--|... |+.||+. |.. ..+ .+++.++|+.++|.+....+|. .|||||+||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHHH
Confidence 9999999987755 9999997 332 222 3457889999999999999985 5699999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecCh
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNP 1464 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p 1464 (1496)
||+..+|++|+=||||-|||+++...|.+.+.+.- .|.||++.||+.+.+.+ --|++.+++|+++..+.+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999998754 58999999999999988 467999999999987654
No 143
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-40 Score=361.93 Aligned_cols=200 Identities=32% Similarity=0.525 Sum_probs=171.0
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC----------eeEE
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------TKAY 685 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g----------~~~y 685 (1496)
..|+++|++++|+. . ++|+||||++++|++++|+||||||||||+++|+|.++|.+|+|.+.| ++||
T Consensus 3 ~~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 3 PMIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred cEEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEE
Confidence 35899999999963 2 699999999999999999999999999999999999999999999876 4899
Q ss_pred EccCC---ccCCCcHHHHhccCCCC-----------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 686 VAQSP---WIQSGKIEDNILFGKEM-----------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 686 v~Q~~---~i~~~ti~eNI~~g~~~-----------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
|||.. |-|..||+|-+.+|... |.++.+++++..++.+ + ..++..+|||||+|||
T Consensus 80 VPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~-~----------~~r~i~~LSGGQ~QRV 148 (254)
T COG1121 80 VPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMED-L----------RDRQIGELSGGQKQRV 148 (254)
T ss_pred cCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchh-h----------hCCcccccCcHHHHHH
Confidence 99965 66888999999998432 2356667777776652 2 2466788999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHH
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLI 829 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~ 829 (1496)
.|||||.++||+|+|||||+|+|+.++..+++ ++..+ .+|+||++||||++.+.. +|+|+.|+ +++...|++++..
T Consensus 149 ~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~-lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 149 LLARALAQNPDLLLLDEPFTGVDVAGQKEIYD-LLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred HHHHHhccCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 99999999999999999999999999998875 45544 459999999999998765 99999996 4688899999886
Q ss_pred hc
Q 039402 830 NS 831 (1496)
Q Consensus 830 ~~ 831 (1496)
+.
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 53
No 144
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7e-40 Score=363.36 Aligned_cols=199 Identities=25% Similarity=0.412 Sum_probs=183.3
Q ss_pred EEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcc
Q 039402 1246 IDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1322 (1496)
|+++||+++|.+.. +++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997642 4699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 039402 1323 LSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSK 1402 (1496)
Q Consensus 1323 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ 1402 (1496)
|+|+||+|.+|++|+++|+......++++.+++++.+++.+.+...|.|+++.+.+.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765566778889999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCCCHHHHHHHHH-HHHHhcC-CcEEEEEccCcchhcccCEEEEEeCCe
Q 039402 1403 ILMLDEATASVDTATDNLIQQ-TLRQHFS-DCTVLTIAHRITSVIDSDLVLLLNHGL 1457 (1496)
Q Consensus 1403 ILiLDEaTsslD~~Td~~Iq~-~I~~~f~-~~TVI~IAHRl~ti~~~DrIlVL~~G~ 1457 (1496)
+++|||||++||+++.+.+.+ .+++..+ +.|||+++|+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999877766 5665543 689999999999999999999999985
No 145
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-40 Score=390.16 Aligned_cols=220 Identities=26% Similarity=0.426 Sum_probs=190.7
Q ss_pred EEEEeEEeEeCC--CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH---Hh
Q 039402 1246 IDLLDLQVRYAP--QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LR 1320 (1496)
Q Consensus 1246 I~f~nvs~~Y~~--~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1320 (1496)
|+++||+++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cccEEEcccccccc-cchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1321 SRLSIIPQDPVMFE-GTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1321 ~~i~iIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
++|+++||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+. ..+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRY-----------PAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999986 6999999632 1222 24567788888876654433 3578999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||||+++|+||+|||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999987
Q ss_pred cCCcHHH
Q 039402 1470 NKSSSFS 1476 (1496)
Q Consensus 1470 ~~~s~F~ 1476 (1496)
++...+.
T Consensus 231 ~~~~~~~ 237 (343)
T PRK11153 231 HPKHPLT 237 (343)
T ss_pred CCCcHHH
Confidence 6544443
No 146
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=374.12 Aligned_cols=219 Identities=25% Similarity=0.416 Sum_probs=190.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1317 (1496)
.|+++||+++|.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. ....
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999975 589999999999875 3456
Q ss_pred HHhcccEEEcccccccccchhhccCCC----CC----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPL----EE----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++|+||+|.+|.+|+++|+... +. ..++++.++++.+++.+.+.. .......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHHH
Confidence 788999999999999999999999631 11 124567888999988765432 223446789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|+||+|||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|+|++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hcCC
Q 039402 1469 ENKS 1472 (1496)
Q Consensus 1469 ~~~~ 1472 (1496)
+++.
T Consensus 237 ~~~~ 240 (253)
T PRK14242 237 TRPR 240 (253)
T ss_pred cCCC
Confidence 6544
No 147
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=373.97 Aligned_cols=222 Identities=25% Similarity=0.394 Sum_probs=191.9
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l~ 1317 (1496)
.|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ....
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999964 3599999999999999999999999999999999999997 48999999999864 3455
Q ss_pred HHhcccEEEcccccccccchhhccCCC----CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPL----EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++|+||+|.+|..|+++|+... ... .++++.++++.+++.+.+. +.+|+ ...+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~----~~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---DKLNT----NALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---HHHhC----CcccCCHHHHH
Confidence 688999999999999999999999632 111 2456778888888865432 23443 45789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|||+|+|+++.+.+ ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998667999999999999866 9999999999999999999998
Q ss_pred hcCCcHH
Q 039402 1469 ENKSSSF 1475 (1496)
Q Consensus 1469 ~~~~s~F 1475 (1496)
+++.-.|
T Consensus 238 ~~~~~~~ 244 (254)
T PRK14273 238 FNPKNTK 244 (254)
T ss_pred hCCCChH
Confidence 7654433
No 148
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.8e-40 Score=368.44 Aligned_cols=210 Identities=23% Similarity=0.356 Sum_probs=183.6
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++||+++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.... .++|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999653246999999999999999999999999999999999999999999999999987643 667889999
Q ss_pred Eccccccc-ccchhhccCCCC---CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMF-EGTVRSNLDPLE---EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF-~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+| ..|+++|+.... ..+ ++++.++++..++.+..... ..+||+|||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKR-----------ARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhCh-----------hhhCCHHHHHHHHHHHHH
Confidence 99999998 579999986311 112 34577888888876543322 257999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
+++|++|+|||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999988777999999999999976 999999999999999998875
No 149
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-40 Score=380.98 Aligned_cols=215 Identities=28% Similarity=0.478 Sum_probs=186.7
Q ss_pred eEEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC--hHHH
Q 039402 1245 KIDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG--LHDL 1319 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--l~~L 1319 (1496)
.|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ...+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 389999999997532 36999999999999999999999999999999999999999999999999998754 4578
Q ss_pred hcccEEEcccc--cccccchhhccCCCC---CCcH----HHHHHHHHHcCCc--HHHHhccCCcccccccCCCCCCchHH
Q 039402 1320 RSRLSIIPQDP--VMFEGTVRSNLDPLE---ESTD----EQIWEALDKCQLG--DEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1320 R~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~--~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
|++++|+||+| .+|+.|+++|+.... ..++ +++.++++.+++. +. .......||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~~LSgGq~ 150 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDY-----------KDKSPFELSGGQK 150 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhh-----------ccCCcccCCHHHH
Confidence 89999999998 578899999996321 2233 3467888888875 22 2233467999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChh
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~ 1465 (1496)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|+|+++.+.. ||||++|++|++++.|+++
T Consensus 151 qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 151 RRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998753 6899999999999864 9999999999999999999
Q ss_pred hHhhc
Q 039402 1466 NLLEN 1470 (1496)
Q Consensus 1466 ~Ll~~ 1470 (1496)
+++++
T Consensus 231 ~~~~~ 235 (287)
T PRK13637 231 EVFKE 235 (287)
T ss_pred HHHhC
Confidence 98753
No 150
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=387.74 Aligned_cols=217 Identities=24% Similarity=0.407 Sum_probs=191.8
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|+.+ ..+|+|+||+|++||.+||+|+||||||||+++|.|+.+|++|+|.+||.++..++.+ +++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999433 4599999999999999999999999999999999999999999999999999887754 47899
Q ss_pred EEccccccccc-chhhccCCC-C--CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPL-E--EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
+|||++.+|.. |+++|+... . ..+ ++++.++++.+++.+...+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 999999732 1 122 245778899999987766655 4689999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCc
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSS 1473 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s 1473 (1496)
|+++|+||+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999999988654 6899999999998865 999999999999999999999988765
Q ss_pred HH
Q 039402 1474 SF 1475 (1496)
Q Consensus 1474 ~F 1475 (1496)
.|
T Consensus 229 ~~ 230 (356)
T PRK11650 229 TF 230 (356)
T ss_pred HH
Confidence 55
No 151
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-39 Score=347.22 Aligned_cols=207 Identities=28% Similarity=0.436 Sum_probs=179.3
Q ss_pred CccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 615 ETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
...|++++++++|. ++.+++|+||+|++||+++|+|||||||||||++|.|+++|++|+|.++|.
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 35799999999995 578999999999999999999999999999999999999999999999984
Q ss_pred ----eEEEccCCccCCC-cHHHHhccCC----CCCHHHHHH----HHHHhchhhH-HHhccCCCcccccCCCCCCChHHH
Q 039402 683 ----KAYVAQSPWIQSG-KIEDNILFGK----EMNRERYNA----VLDACSLKKD-LEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 ----~~yv~Q~~~i~~~-ti~eNI~~g~----~~~~~~~~~----v~~~~~l~~d-~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
+|+++|+--+|+. ||+||+.|.. ...++.+++ -++.++|..+ .+.+| .+||||++
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~ 151 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMR 151 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHH
Confidence 5999999999976 9999999963 344444443 3567777766 44444 78999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC--CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecCh
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS--SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKY 825 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~ 825 (1496)
+|++||||+..||+|+++|||||+|||.++..+ ++++..+.+ +-|+|+||||++.+.. ||+++++.||+|+..|++
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~~~-~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~ 230 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAGVI-DELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTP 230 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHHHH-HHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCH
Confidence 999999999999999999999999999986654 677776544 8999999999998765 999999999999999999
Q ss_pred HHHHhcCcchH
Q 039402 826 NDLINSGTDFM 836 (1496)
Q Consensus 826 ~~l~~~~~~~~ 836 (1496)
+|+.+++..+-
T Consensus 231 ~el~~sd~P~v 241 (263)
T COG1127 231 EELLASDDPWV 241 (263)
T ss_pred HHHHhCCCHHH
Confidence 99988765443
No 152
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.8e-40 Score=363.61 Aligned_cols=201 Identities=30% Similarity=0.456 Sum_probs=173.0
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC-------------ee
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g-------------~~ 683 (1496)
.++++|++|+|+ ++++++|+||++++||+++|+|||||||||||++|+|.++|.+|+|.++| .+
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999996 57899999999999999999999999999999999999999999999999 46
Q ss_pred EEEccCCcc-CCCcHHHHhccCCC-C----------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 684 AYVAQSPWI-QSGKIEDNILFGKE-M----------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 684 ~yv~Q~~~i-~~~ti~eNI~~g~~-~----------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
|||||++.. +.-||+|-+.+|+. + |++...++++.+++.+.. .+...+|||||||||
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHHHHH
Confidence 999999755 56699999999952 1 223345556776665432 355678999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcc-ccCCEEEEEeCCeEEEecChHHHH
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFL-PAADLILVMKDGKITQAGKYNDLI 829 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~G~~~~l~ 829 (1496)
.|||||+++|+|+|||||||+||....-++++.+.+.. .+|+|+|+|+||++.. .+||++++|++|+++.+|+++|++
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999987554443 3589999999999986 569999999999999999999887
Q ss_pred hc
Q 039402 830 NS 831 (1496)
Q Consensus 830 ~~ 831 (1496)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 54
No 153
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=377.55 Aligned_cols=215 Identities=29% Similarity=0.423 Sum_probs=192.2
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+..+++++|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999654456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcccc--cccccchhhccCCCC---CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1325 IIPQDP--VMFEGTVRSNLDPLE---EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1325 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
|+||+| .+++.|+++||.... ..+ ++++.++++.++|.+.+...| ..||+|||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 567789999996421 122 245778889889887766555 368999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||+++|+||||||||++||+.+...+.+.|++..+ ++|||+++|+++.+..||+|++|++|++++.|+++++.+.
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998764 7899999999999989999999999999999999998753
No 154
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=373.82 Aligned_cols=223 Identities=24% Similarity=0.479 Sum_probs=191.8
Q ss_pred CCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCC--
Q 039402 1241 PSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL-- 1313 (1496)
Q Consensus 1241 p~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~-- 1313 (1496)
|....|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 33457999999999964 359999999999999999999999999999999999987 689999999999863
Q ss_pred CChHHHhcccEEEcccccccccchhhccCCCC---CC---cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1314 IGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE---ES---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1314 i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
.+..++|++++++||+|.+|.+|+++|+.... .+ .++++.++++.+++.+.+. ........+||+||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 159 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQ 159 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHH
Confidence 56678899999999999999999999997432 11 2455777888887754332 22334457899999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeC-----------
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNH----------- 1455 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~----------- 1455 (1496)
|||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+++|+++.+.+ ||+|++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 99999999999999999999999999999999999999988667899999999999876 999999996
Q ss_pred CeEeEecChhhHhhcCC
Q 039402 1456 GLIEEFDNPANLLENKS 1472 (1496)
Q Consensus 1456 G~IvE~g~p~~Ll~~~~ 1472 (1496)
|+++|.|+++++++++.
T Consensus 240 g~~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 240 GYLVEFNETKKIFNSPK 256 (269)
T ss_pred ceEEEeCCHHHHHhCcC
Confidence 67999999999987543
No 155
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.9e-39 Score=370.68 Aligned_cols=221 Identities=27% Similarity=0.456 Sum_probs=191.2
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----ccEEEECCeeCCCC--ChHH
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPA-----AGQILIDGIDISLI--GLHD 1318 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~i--~l~~ 1318 (1496)
|+++||+++|+.. .+++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... ....
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999743 5999999999999999999999999999999999999998 99999999999763 4566
Q ss_pred HhcccEEEcccccccccchhhccCCC---CC-Cc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1319 LRSRLSIIPQDPVMFEGTVRSNLDPL---EE-ST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1319 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
.|++++|+||+|.+|..|+++|+... .. .+ ++++.++++..++.+.+.. .......+||+|||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD-------RLHDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh-------HhhCCcccCCHHHHHH
Confidence 78899999999999999999999631 11 11 3457788999998744421 1223446899999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999987
Q ss_pred cCCcHH
Q 039402 1470 NKSSSF 1475 (1496)
Q Consensus 1470 ~~~s~F 1475 (1496)
++...+
T Consensus 233 ~~~~~~ 238 (247)
T TIGR00972 233 NPKEKR 238 (247)
T ss_pred CCCChH
Confidence 655544
No 156
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=377.54 Aligned_cols=212 Identities=27% Similarity=0.399 Sum_probs=188.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999643 45999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcccc--cccccchhhccCCCC---CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1325 IIPQDP--VMFEGTVRSNLDPLE---EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1325 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
|+||+| .+|..|+++|+.... ..+ ++++.++++.+++.+...+.| ..||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999998 688899999997321 122 356788899999876655544 368999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
||+++|++|||||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999998864 47899999999999865 9999999999999999997653
No 157
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.1e-39 Score=371.14 Aligned_cols=218 Identities=24% Similarity=0.352 Sum_probs=194.7
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcc
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSR 1322 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1322 (1496)
.+.|+++|++++ + .++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~---~-~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLV---G-APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEe---c-ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 457999999985 2 3599999999999999999999999999999999999999999999998 4
Q ss_pred cEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 039402 1323 LSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSK 1402 (1496)
Q Consensus 1323 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ 1402 (1496)
++|+||++.+|++|+++|+.....+.+.++.++++.+++.+.+..+|.++++.+.+.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998543445556778889899999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCCCHHHHHHHHHH-HHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhcCCcHHHHH
Q 039402 1403 ILMLDEATASVDTATDNLIQQT-LRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLENKSSSFSQL 1478 (1496)
Q Consensus 1403 ILiLDEaTsslD~~Td~~Iq~~-I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l 1478 (1496)
||||||||++||+++...+.+. +++..+++|||+|+|+++.+..||+|++|++|+++++|+++++.+. .+.|.+-
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~ 255 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSK 255 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHH
Confidence 9999999999999999888765 4555567999999999999989999999999999999999999854 3344433
No 158
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=386.03 Aligned_cols=217 Identities=24% Similarity=0.433 Sum_probs=192.2
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
..|+++|++++|.. ..+|+|+||+|++||.+||+|+||||||||+++|.|+.+|++|+|.+||.++...+. .++++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 46999999999964 458999999999999999999999999999999999999999999999999987664 35789
Q ss_pred EEEccccccccc-chhhccCC-CC--CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDP-LE--EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp-~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
++++|++.+|.. |+++|+.. .. ..+ ++++.++++..++.+...+.| ..||||||||++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 99999973 21 122 356788899999876654443 468999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCC
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKS 1472 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~ 1472 (1496)
||+++|+||+||||||+||+.+.+.+++.|++..+ ++|+|+|||+.+.+.. ||+|+||++|+|++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999999866 99999999999999999999998877
Q ss_pred cHH
Q 039402 1473 SSF 1475 (1496)
Q Consensus 1473 s~F 1475 (1496)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 655
No 159
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=372.77 Aligned_cols=219 Identities=29% Similarity=0.426 Sum_probs=189.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCC--CCChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDIS--LIGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~--~i~l~ 1317 (1496)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 3599999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HHhcccEEEccccccccc-chhhccCCC---CC------CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1318 DLRSRLSIIPQDPVMFEG-TVRSNLDPL---EE------STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~g-TIR~NLdp~---~~------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
.+|++++++||+|.+|.+ |+++|+... .. ..++++.++++..++.+.+.. .......+||+||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD-------RLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh-------hhccChhhCCHHH
Confidence 788999999999999976 999999631 11 112457788888887644322 1234457899999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhh
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
|||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987677999999999999876 99999999999999999999
Q ss_pred HhhcCC
Q 039402 1467 LLENKS 1472 (1496)
Q Consensus 1467 Ll~~~~ 1472 (1496)
+++++.
T Consensus 235 ~~~~~~ 240 (253)
T PRK14267 235 VFENPE 240 (253)
T ss_pred HHhCCC
Confidence 986543
No 160
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=368.72 Aligned_cols=213 Identities=26% Similarity=0.408 Sum_probs=184.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 2 SIEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 3789999999964 459999999999999999999999999999999999999999999999999876553 367899
Q ss_pred EEcccccccc-cchhhccCCCC---CC----c----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1325 IIPQDPVMFE-GTVRSNLDPLE---ES----T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1325 iIpQdp~LF~-gTIR~NLdp~~---~~----s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
|+||+|.+|. .|+++|+.... .. + ++++.++++..++.+...+. ..+||+|||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----------PAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 9999999986 59999997421 11 1 23466778888876544333 3578999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||||+++|++|+|||||++||+++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998643 6899999999998765 99999999999999999999986
Q ss_pred cCC
Q 039402 1470 NKS 1472 (1496)
Q Consensus 1470 ~~~ 1472 (1496)
++.
T Consensus 227 ~~~ 229 (239)
T cd03296 227 HPA 229 (239)
T ss_pred CCC
Confidence 543
No 161
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-39 Score=370.86 Aligned_cols=211 Identities=29% Similarity=0.443 Sum_probs=184.1
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC---hHHHhcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG---LHDLRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---l~~LR~~ 1322 (1496)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 45999999999999999999999999999999999999999999999999998876 4568889
Q ss_pred cEEEcccccccc-cchhhccCCC------------C---CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 039402 1323 LSIIPQDPVMFE-GTVRSNLDPL------------E---ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1386 (1496)
Q Consensus 1323 i~iIpQdp~LF~-gTIR~NLdp~------------~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1386 (1496)
++++||++.+|. .|+++|+... + ...++++.++++..++.+.. ...+.+||+|
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKA-----------YQRADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhh-----------CCCcccCCHH
Confidence 999999998887 6999999521 1 11234567778888775433 2245679999
Q ss_pred HHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecC
Q 039402 1387 QRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDN 1463 (1496)
Q Consensus 1387 QrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~ 1463 (1496)
||||++||||++++|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999865 37899999999999984 99999999999999999
Q ss_pred hhhHh
Q 039402 1464 PANLL 1468 (1496)
Q Consensus 1464 p~~Ll 1468 (1496)
++++.
T Consensus 229 ~~~~~ 233 (241)
T cd03256 229 PAELT 233 (241)
T ss_pred HHHhh
Confidence 99974
No 162
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=373.12 Aligned_cols=222 Identities=23% Similarity=0.411 Sum_probs=192.4
Q ss_pred CcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCC--C
Q 039402 1242 SHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--I 1314 (1496)
Q Consensus 1242 ~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i 1314 (1496)
+.+.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 4568999999999964 3599999999999999999999999999999999999975 89999999999875 3
Q ss_pred ChHHHhcccEEEcccccccccchhhccCCC---CCC------cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 039402 1315 GLHDLRSRLSIIPQDPVMFEGTVRSNLDPL---EES------TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1385 (1496)
Q Consensus 1315 ~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~------sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1385 (1496)
+...+|++++++||+|.+|.+|+++|+... ... .++++.++++.+++.+.+.. .....+.+||+
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCH
Confidence 456788999999999999999999999631 111 13457888999988654432 12344578999
Q ss_pred hHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecCh
Q 039402 1386 GQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNP 1464 (1496)
Q Consensus 1386 GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p 1464 (1496)
|||||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667899999999999965 899999999999999999
Q ss_pred hhHhhcCC
Q 039402 1465 ANLLENKS 1472 (1496)
Q Consensus 1465 ~~Ll~~~~ 1472 (1496)
++++.++.
T Consensus 247 ~~~~~~~~ 254 (267)
T PRK14235 247 EKMFTNPD 254 (267)
T ss_pred HHHHhCCC
Confidence 99986543
No 163
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=9.6e-40 Score=365.58 Aligned_cols=202 Identities=25% Similarity=0.371 Sum_probs=177.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH---HHhcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~~ 1322 (1496)
|+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999965434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred cEEEcccccccc-cchhhccCCC----C---CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1323 LSIIPQDPVMFE-GTVRSNLDPL----E---ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1323 i~iIpQdp~LF~-gTIR~NLdp~----~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
++++||+|.+|. .|+++|+... + +..++++.++++.+++.+.....| .+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999887 4999999631 1 113456888999999876655443 46899999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeE
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLI 1458 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~I 1458 (1496)
|||+++|+||+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|+|
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998764 37899999999999976 999999999985
No 164
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=370.41 Aligned_cols=223 Identities=30% Similarity=0.475 Sum_probs=192.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCCCChHHH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLIGLHDL 1319 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i~l~~L 1319 (1496)
.|+++||+++|.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 3599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcccEEEccccccc-ccchhhccCCC---CC---C---cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1320 RSRLSIIPQDPVMF-EGTVRSNLDPL---EE---S---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1320 R~~i~iIpQdp~LF-~gTIR~NLdp~---~~---~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
|++++++||+|.+| +.|+++|+... .. . .++++.++++.+++.+.+.. .+|. ...+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~~----~~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKD---RLDA----PAGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhh---hhcC----CcccCCHHHHH
Confidence 99999999999755 67999999631 11 1 13567889999988654321 2333 34679999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999999987678999999999999865 9999999999999999999998
Q ss_pred hcCCcHHH
Q 039402 1469 ENKSSSFS 1476 (1496)
Q Consensus 1469 ~~~~s~F~ 1476 (1496)
+++...+.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14247 234 TNPRHELT 241 (250)
T ss_pred cCCccHHH
Confidence 76544343
No 165
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.5e-40 Score=387.57 Aligned_cols=205 Identities=28% Similarity=0.398 Sum_probs=182.2
Q ss_pred CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH----hcccEEEccccccccc
Q 039402 1260 PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL----RSRLSIIPQDPVMFEG 1335 (1496)
Q Consensus 1260 ~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L----R~~i~iIpQdp~LF~g 1335 (1496)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|+|||.|+...+..++ |++++|+||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999998887 7899999999999975
Q ss_pred -chhhccCCC---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEE
Q 039402 1336 -TVRSNLDPL---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLD 1407 (1496)
Q Consensus 1336 -TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLD 1407 (1496)
||++|+... ... .++++.++|+.++|.++..+.| .+||||||||++|||||+++|+||+||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999631 112 2356788899998876655544 478999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHH
Q 039402 1408 EATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSF 1475 (1496)
Q Consensus 1408 EaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F 1475 (1496)
||||+||+.+.+.+++.+++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+|+++++++...|
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999999999998764 37899999999998755 99999999999999999999998765444
No 166
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-39 Score=369.47 Aligned_cols=212 Identities=27% Similarity=0.432 Sum_probs=182.9
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH-hcccE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RSRLS 1324 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i~ 1324 (1496)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |.+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999964 359999999999999999999999999999999999999999999999999988876664 57899
Q ss_pred EEccccccccc-chhhccCCCC----CC-------------cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPLE----ES-------------TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1386 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~~----~~-------------sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1386 (1496)
++||+|.+|.+ |+++|+.... .. .++++.++++..++.+. .......||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG 147 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADL-----------ADRPAGELSYG 147 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccch-----------hhCChhhCCHH
Confidence 99999999987 9999985321 10 12235566666665432 23344679999
Q ss_pred HHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecCh
Q 039402 1387 QRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNP 1464 (1496)
Q Consensus 1387 QrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p 1464 (1496)
||||++||||++++|++|+|||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++
T Consensus 148 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (236)
T cd03219 148 QQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTP 227 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCH
Confidence 9999999999999999999999999999999999999998865 57899999999999976 999999999999999999
Q ss_pred hhHhhc
Q 039402 1465 ANLLEN 1470 (1496)
Q Consensus 1465 ~~Ll~~ 1470 (1496)
++++++
T Consensus 228 ~~~~~~ 233 (236)
T cd03219 228 DEVRNN 233 (236)
T ss_pred HHhccC
Confidence 998754
No 167
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=369.47 Aligned_cols=215 Identities=25% Similarity=0.392 Sum_probs=188.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 459999999999999999999999999999999999999999999999999998888888999999
Q ss_pred Ecccccccc-cchhhccCCC---CCCc----HHHHHHHHHHcCCcH--HHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1326 IPQDPVMFE-GTVRSNLDPL---EEST----DEQIWEALDKCQLGD--EVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1326 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~--~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
+||+|.+|. .|+++|+... ...+ ++++.+++++.++.+ .. .....+||+|||||++|||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-----------~~~~~~LS~G~~qrv~lar 148 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFA-----------DRYPHELSGGQQQRVGVAR 148 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHH-----------hcChhhCCHHHHHHHHHHH
Confidence 999999996 6999999632 1112 345677888887763 22 2334679999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCC
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKS 1472 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~ 1472 (1496)
|++++|++|+|||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 149 al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 228 (242)
T cd03295 149 ALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPA 228 (242)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCC
Confidence 99999999999999999999999999999998653 7999999999998765 99999999999999999999976543
No 168
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=369.31 Aligned_cols=467 Identities=19% Similarity=0.172 Sum_probs=338.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCch------hHHHHHhhhHHHHHhhh
Q 039402 966 TLLIVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSG------RIINRASTDQSAADLGI 1039 (1496)
Q Consensus 966 ~~l~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G------rIlnR~s~D~~~vd~~l 1039 (1496)
..+.+|..++.+...+...+.++......+.-.-+-+.++++-+..- .||...-.| ..=+|...|+...-..-
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t 165 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RYYRLAQAGGIGLIDNPDQRIQEDIRNFTETT 165 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhcccccCCCChHHhHHHHHHHHHhhH
Confidence 34678888888888888888888888888888888888888887766 555444333 33468888887776655
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH---------------hHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039402 1040 PSLVGAYAFSIIRILGTIAVMSQV---------------AWQVFIV----FVPAVGSCIWYQQYYISSARELSRLVGVCK 1100 (1496)
Q Consensus 1040 ~~~~~~~~~~~~~~l~~~~~~~~~---------------~~~~~~~----~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~ 1100 (1496)
-.....++.+++++++..+++... ...++.+ ++...++..++.+...+-.-+-.++|+.-|
T Consensus 166 ~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR 245 (604)
T COG4178 166 LDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFR 245 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHH
Confidence 555666666666666555554411 1111111 111222334666777777777777777777
Q ss_pred chHHHHHHHhhcchHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCC
Q 039402 1101 APVIQHFAETVSGSTTIRSFDQESRFRDRNMKLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAF-TLVFLISIPKGFID 1179 (1496)
Q Consensus 1101 sp~~~~~~Etl~G~~tIRaf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~-~~~~~~~~~~g~~~ 1179 (1496)
+.+.. .-+....|-.|+-|+...++..+..+.-...+......+.++...-...+-+.+.+ ..+..-....|.++
T Consensus 246 ~~Lvr----v~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~ 321 (604)
T COG4178 246 YSLVR----VRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQIT 321 (604)
T ss_pred HHHHH----HHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcCh
Confidence 65443 34566778888888776666655555544444443333333333222222221111 11111123478889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhc------CCCCCCCCccCCCCCCCCCCcceEEEEeEEe
Q 039402 1180 PAIAGLAVTYGLTLNTLLATLIWFACDLENKIISVERIFQYTC------IPSEPPLAIEESRPNDSWPSHGKIDLLDLQV 1253 (1496)
Q Consensus 1180 ~g~~gl~l~y~l~l~~~l~~~i~~~~~le~~~~sveRi~~~~~------~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~ 1253 (1496)
-|.+..+.+-..++...+.|++..+..+..-.....|+.++.+ .+.+.+.... .+-...-.....|.|+|+++
T Consensus 322 ~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l 400 (604)
T COG4178 322 FGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLSL 400 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeeeE
Confidence 8888888888889999999999999999999999999999863 2222211100 00000000146899999999
Q ss_pred EeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEccccccc
Q 039402 1254 RYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMF 1333 (1496)
Q Consensus 1254 ~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF 1333 (1496)
.-+++. ..|++++|+++|||.+-|.|+||||||||+++|.|+.+-.+|+|.+-. -+++-++||.|.+-
T Consensus 401 ~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p 468 (604)
T COG4178 401 RTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLP 468 (604)
T ss_pred ECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCC
Confidence 987665 689999999999999999999999999999999999999999987751 24689999999999
Q ss_pred ccchhhccC-CCC--CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCC
Q 039402 1334 EGTVRSNLD-PLE--ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEAT 1410 (1496)
Q Consensus 1334 ~gTIR~NLd-p~~--~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaT 1410 (1496)
.||+|+-|. |.. +++|+|+.++|.+|+|.+.+.++.+--+ =..-||+||||||++||.+|++|++++|||||
T Consensus 469 ~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEAT 543 (604)
T COG4178 469 QGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEAT 543 (604)
T ss_pred CccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecch
Confidence 999999997 443 3899999999999999999988743221 23569999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeC
Q 039402 1411 ASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNH 1455 (1496)
Q Consensus 1411 sslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~ 1455 (1496)
|+||++++..+.+.++++.+++|||.|+||.....-.++.+-+++
T Consensus 544 sALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 544 SALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred hccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 999999999999999999999999999999888777777666654
No 169
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-39 Score=367.97 Aligned_cols=214 Identities=30% Similarity=0.443 Sum_probs=186.5
Q ss_pred EEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH---Hh
Q 039402 1246 IDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LR 1320 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1320 (1496)
|+++|++++|+... .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431 26999999999999999999999999999999999999999999999999998776543 57
Q ss_pred cccEEEcccccccc-cchhhccCCC---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1321 SRLSIIPQDPVMFE-GTVRSNLDPL---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1321 ~~i~iIpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
++++++||+|.+|. .|+++|+... ... .++++.++++..++.+...+. ..+||+|||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAY-----------PAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 89999999999997 5999998631 111 234678888888886554433 2578999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
||||++++|++|||||||++||+.+...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998653 7899999999999876 99999999999999999999875
Q ss_pred c
Q 039402 1470 N 1470 (1496)
Q Consensus 1470 ~ 1470 (1496)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 170
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=346.82 Aligned_cols=212 Identities=26% Similarity=0.403 Sum_probs=190.9
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC---hHHHhc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG---LHDLRS 1321 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---l~~LR~ 1321 (1496)
.|+++||+.+|+. ...+|+||||+|++||.|+|+|+||||||||+++|.|+.+|++|+|.++|.++.... ++++|.
T Consensus 3 ~i~~~nl~k~yp~-~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPG-GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCC-CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 5899999999974 456999999999999999999999999999999999999999999999999999987 778899
Q ss_pred ccEEEccccccccc-chhhccCC------------CCCCcH---HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 039402 1322 RLSIIPQDPVMFEG-TVRSNLDP------------LEESTD---EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1385 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~g-TIR~NLdp------------~~~~sd---~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1385 (1496)
++|+|.|+|-|-+. |+-+|+.- |+-++. ....+||+++++.|..-.. .++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qr-----------a~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQR-----------ASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHH-----------hccCCc
Confidence 99999999998865 99999741 233443 4578899999998876554 357899
Q ss_pred hHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1386 GQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1386 GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
||+||++|||||..+|+|++=|||||+||+.+.+.|++.|++.. .+.|||+.-|.++..+. ||||+-|++|+|+-.|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999865 46899999999999976 9999999999999999
Q ss_pred ChhhHh
Q 039402 1463 NPANLL 1468 (1496)
Q Consensus 1463 ~p~~Ll 1468 (1496)
++.+|-
T Consensus 231 ~~~el~ 236 (258)
T COG3638 231 PASELT 236 (258)
T ss_pred Chhhhh
Confidence 999964
No 171
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.8e-39 Score=351.99 Aligned_cols=178 Identities=34% Similarity=0.564 Sum_probs=167.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975434699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred EcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEE
Q 039402 1326 IPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILM 1405 (1496)
Q Consensus 1326 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILi 1405 (1496)
+||+|.+|++|+++|+ ..+||+|||||++||||++++|++|+
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 46799999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCeEeEec
Q 039402 1406 LDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1406 LDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g 1462 (1496)
|||||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999887789999999999999889999999999999865
No 172
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.1e-39 Score=385.58 Aligned_cols=217 Identities=26% Similarity=0.418 Sum_probs=191.8
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|.. ..+|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 5899999999964 3589999999999999999999999999999999999999999999999999877654 67899
Q ss_pred EEcccccccc-cchhhccCC-CC--CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVMFE-GTVRSNLDP-LE--EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~LF~-gTIR~NLdp-~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
++||++.+|. .|+++|+.. .. ..+ ++++.++++..++.+.....| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 599999963 21 122 356778888888876655444 5789999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCc
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSS 1473 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s 1473 (1496)
|+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|+++++|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPAT 228 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999988654 6899999999999866 999999999999999999999988776
Q ss_pred HHH
Q 039402 1474 SFS 1476 (1496)
Q Consensus 1474 ~F~ 1476 (1496)
.|.
T Consensus 229 ~~~ 231 (353)
T TIGR03265 229 PFV 231 (353)
T ss_pred HHH
Confidence 663
No 173
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=376.72 Aligned_cols=216 Identities=24% Similarity=0.385 Sum_probs=184.3
Q ss_pred eEEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCC----ChH
Q 039402 1245 KIDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~ 1317 (1496)
.|+++||+++|++.. +++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 389999999996432 3699999999999999999999999999999999999999999999999999754 346
Q ss_pred HHhcccEEEcccc--cccccchhhccCCC--C-CCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1318 DLRSRLSIIPQDP--VMFEGTVRSNLDPL--E-ESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~--~-~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
.+|++|+|+||+| .+|+.|+++|+... . ..+. +++.++++.+++... .......+||+|||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHH
Confidence 7899999999998 68889999999632 1 2232 334556666665411 12234568999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhc-ccCEEEEEeCCeEeEecChh
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVI-DSDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~-~~DrIlVL~~G~IvE~g~p~ 1465 (1496)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+. .||||++|++|++++.|+|+
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~ 231 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPK 231 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999864 4799999999999986 49999999999999999999
Q ss_pred hHhhc
Q 039402 1466 NLLEN 1470 (1496)
Q Consensus 1466 ~Ll~~ 1470 (1496)
+++++
T Consensus 232 ~~~~~ 236 (286)
T PRK13646 232 ELFKD 236 (286)
T ss_pred HHHhC
Confidence 98864
No 174
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=371.44 Aligned_cols=220 Identities=26% Similarity=0.457 Sum_probs=192.0
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCC--CCh
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGL 1316 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l 1316 (1496)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 36999999999953 469999999999999999999999999999999999997 589999999999864 346
Q ss_pred HHHhcccEEEcccccccccchhhccCCC----CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1317 HDLRSRLSIIPQDPVMFEGTVRSNLDPL----EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1317 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
..+|++++++||+|.+|.+|+++|+... +.. .++++.++++.+++.+.+.. ........||+|||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKD-------DLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhh-------hhcCCcccCCHHHH
Confidence 6789999999999999999999999631 111 23557788999988655432 23455678999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
||++||||++++|++|+|||||++||+.+...+.+.|++..++.|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhcCC
Q 039402 1468 LENKS 1472 (1496)
Q Consensus 1468 l~~~~ 1472 (1496)
.+.+.
T Consensus 250 ~~~~~ 254 (267)
T PRK14237 250 FTNPK 254 (267)
T ss_pred hcCCC
Confidence 86543
No 175
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.4e-39 Score=350.95 Aligned_cols=204 Identities=30% Similarity=0.435 Sum_probs=177.5
Q ss_pred EEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH---HH-
Q 039402 1246 IDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DL- 1319 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~L- 1319 (1496)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||++.|-++-.|++|+|.++|.|+..++-+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67899999996543 3699999999999999999999999999999999999999999999999999999843 34
Q ss_pred hcccEEEccccccccc-chhhccC-C--CCCC----cHHHHHHHHHHcCCcHHHH-hccCCcccccccCCCCCCchHHHH
Q 039402 1320 RSRLSIIPQDPVMFEG-TVRSNLD-P--LEES----TDEQIWEALDKCQLGDEVR-KKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1320 R~~i~iIpQdp~LF~g-TIR~NLd-p--~~~~----sd~eI~~aL~~~~L~~~i~-~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
|++||+|+|+..|++. |++||+. | +... .++.+.+.++..++.+... +.| ..||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 5679999999998876 9999997 2 2222 2445667778888876655 444 4689999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcccCEEEEEeCCeEeE
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVIDSDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE 1460 (1496)
++|||||+.+|+|++.||||++||.+|.+.|.+.+++.. .++|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999875 3689999999999999999999999999543
No 176
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=371.66 Aligned_cols=222 Identities=24% Similarity=0.426 Sum_probs=191.1
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCCCC--hH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISLIG--LH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i~--l~ 1317 (1496)
.-+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++...+ ..
T Consensus 5 ~~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 5 HASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 3578999999963 469999999999999999999999999999999999986 47999999999987653 34
Q ss_pred HHhcccEEEcccccccccchhhccCCC---CC------CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPL---EE------STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
.+|++++|+||+|.+|.+|+++|+... .. ..++++.++++..++.+.+. +.+...+.+||+|||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 678999999999999999999999631 11 12356778889988865432 122344678999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
||++||||++++|+||+|||||++||+.+.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999999
Q ss_pred hhcCCcHH
Q 039402 1468 LENKSSSF 1475 (1496)
Q Consensus 1468 l~~~~s~F 1475 (1496)
++++...+
T Consensus 236 ~~~~~~~~ 243 (251)
T PRK14244 236 FKNPQSSK 243 (251)
T ss_pred hcCCCChH
Confidence 97765544
No 177
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-40 Score=342.79 Aligned_cols=206 Identities=29% Similarity=0.433 Sum_probs=178.2
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCc-----cEEEEcCe--------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS-----GTLKLCGT-------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~-----G~i~~~g~-------- 682 (1496)
..++++|+++.|. ++.+|+|||++|++++++|++||+||||||||+++.+..+..+ |+|.++|+
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 4689999999996 5789999999999999999999999999999999999887765 99999884
Q ss_pred -------eEEEccCCccCCCcHHHHhccCCCC---C----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 -------KAYVAQSPWIQSGKIEDNILFGKEM---N----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 -------~~yv~Q~~~i~~~ti~eNI~~g~~~---~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
+|+|+|.|.-|..||+|||.+|... . ++..++.++.++|-+..+ ..+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVK-------DrL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVK-------DRLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhH-------HHhhCCccCCChhHH
Confidence 4999999999999999999999542 1 233445555555544332 124577889999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
||++|||||.-+|+|+|||||||||||.+..+| ++++..+.++-|+|+|||+++...+ +|+...+.+|++++.|+.++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 999999999999999999999999999998888 7788888889999999999998776 99999999999999999999
Q ss_pred HHhcC
Q 039402 828 LINSG 832 (1496)
Q Consensus 828 l~~~~ 832 (1496)
+..+.
T Consensus 235 iF~~P 239 (253)
T COG1117 235 IFTNP 239 (253)
T ss_pred hhcCc
Confidence 87653
No 178
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=370.12 Aligned_cols=222 Identities=27% Similarity=0.418 Sum_probs=189.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1317 (1496)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 359999999999999999999999999999999999997 479999999999864 3455
Q ss_pred HHhcccEEEcccccccccchhhccCCCC---CC-----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPLE---ES-----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~-----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|+.++++||+|.+|++|+++|+.... .. .++++.++++.+++++... ..+ .....+||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~----~~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK---DNL----DRNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH---HHh----ccChhhCCHHHHH
Confidence 6788999999999999999999997421 11 2345677788888753211 122 2345789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|++|||||||++||+++...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988777899999999999876 9999999999999999999998
Q ss_pred hcCCcHH
Q 039402 1469 ENKSSSF 1475 (1496)
Q Consensus 1469 ~~~~s~F 1475 (1496)
..+.-.|
T Consensus 235 ~~~~~~~ 241 (251)
T PRK14251 235 IAPKKQI 241 (251)
T ss_pred hCCCCHH
Confidence 6554334
No 179
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=369.23 Aligned_cols=220 Identities=25% Similarity=0.427 Sum_probs=189.8
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc---cCC--CccEEEECCeeCCCC--ChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRI---VEP--AAGQILIDGIDISLI--GLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl---~ep--~~G~I~IDG~dI~~i--~l~ 1317 (1496)
.|+++|++++|++ ..+|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999964 3599999999999999999999999999999999997 344 589999999999764 346
Q ss_pred HHhcccEEEcccccccccchhhccCC-CC--C-----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDP-LE--E-----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp-~~--~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++|+||+|.+|.+|+++|+.. .. . ..++++.++++.+++.+.+.. .....+.+||+||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHHH
Confidence 77889999999999999999999963 11 1 123467888888888654432 123456789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|+||||||||++||+.+.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999865 9999999999999999999998
Q ss_pred hcCCc
Q 039402 1469 ENKSS 1473 (1496)
Q Consensus 1469 ~~~~s 1473 (1496)
+++..
T Consensus 234 ~~~~~ 238 (250)
T PRK14245 234 TNPEK 238 (250)
T ss_pred cCCCC
Confidence 76543
No 180
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.7e-39 Score=368.67 Aligned_cols=211 Identities=29% Similarity=0.424 Sum_probs=183.2
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCCh---HHHhcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL---HDLRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR~~ 1322 (1496)
|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999633 459999999999999999999999999999999999999999999999999987654 457889
Q ss_pred cEEEcccccccc-cchhhccCCCC---------------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 039402 1323 LSIIPQDPVMFE-GTVRSNLDPLE---------------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1386 (1496)
Q Consensus 1323 i~iIpQdp~LF~-gTIR~NLdp~~---------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1386 (1496)
++++||++.+|. .|+++|+.... ...++++.++++.+++.+... ....+||+|
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAY-----------QRADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHH
Confidence 999999999886 59999995210 112345777888887754432 234679999
Q ss_pred HHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecC
Q 039402 1387 QRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDN 1463 (1496)
Q Consensus 1387 QrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~ 1463 (1496)
||||++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|+|+++.+.+ ||+|++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 99999999999999999999999999999999999999998643 7899999999999865 99999999999999999
Q ss_pred hhhHh
Q 039402 1464 PANLL 1468 (1496)
Q Consensus 1464 p~~Ll 1468 (1496)
++++.
T Consensus 230 ~~~~~ 234 (243)
T TIGR02315 230 PSELD 234 (243)
T ss_pred HHHhC
Confidence 99874
No 181
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-39 Score=373.45 Aligned_cols=216 Identities=26% Similarity=0.423 Sum_probs=191.8
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCc---cEEEECCeeCCCCChHHHh
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAA---GQILIDGIDISLIGLHDLR 1320 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~---G~I~IDG~dI~~i~l~~LR 1320 (1496)
+.|+++|++++|++...++|+|+||+|++||.+||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999996543459999999999999999999999999999999999999988 8999999999888877889
Q ss_pred cccEEEcccc--cccccchhhccCCC---CCCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1321 SRLSIIPQDP--VMFEGTVRSNLDPL---EESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1321 ~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
++++|+||+| .+++.|+++||... ...++ +++.++++.+++.+.....| .+||+|||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999998 46788999999732 12333 34778899999877655544 57899999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhh
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
+|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||+++|+++.+..||+|++|++|++++.|+++++++
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998753 689999999999998899999999999999999999875
Q ss_pred c
Q 039402 1470 N 1470 (1496)
Q Consensus 1470 ~ 1470 (1496)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 3
No 182
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-39 Score=375.90 Aligned_cols=214 Identities=28% Similarity=0.399 Sum_probs=185.3
Q ss_pred EEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCC----CChHH
Q 039402 1246 IDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL----IGLHD 1318 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~----i~l~~ 1318 (1496)
|+++||+++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997543 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcccEEEcccc--cccccchhhccCCCC---CCc----HHHHHHHHHHcCCcH-HHHhccCCcccccccCCCCCCchHH
Q 039402 1319 LRSRLSIIPQDP--VMFEGTVRSNLDPLE---EST----DEQIWEALDKCQLGD-EVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1319 LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
+|+++++++|+| .+|.+|+.+|+.... ..+ ++++.++++.+++.+ +.. ....+||+|||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWE-----------KSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhcc-----------CCcccCCHHHH
Confidence 899999999998 799999999996321 122 234677788888753 322 23467999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhh
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|+|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998754 47899999999998864 99999999999999999999
Q ss_pred Hhhc
Q 039402 1467 LLEN 1470 (1496)
Q Consensus 1467 Ll~~ 1470 (1496)
++++
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 9753
No 183
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-39 Score=367.99 Aligned_cols=224 Identities=23% Similarity=0.429 Sum_probs=192.2
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCCC--ChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1317 (1496)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4599999999999999999999999999999999999984 899999999998753 345
Q ss_pred HHhcccEEEcccccccccchhhccCCC----CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPL----EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++++||+|.+|..|+++|+... +.. .++++.++++..++.+.+.. .......+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHHH
Confidence 678899999999999999999999631 111 23456778888888654422 234456789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999987778999999999998765 9999999999999999999998
Q ss_pred hcCCcHHHH
Q 039402 1469 ENKSSSFSQ 1477 (1496)
Q Consensus 1469 ~~~~s~F~~ 1477 (1496)
+++...|.+
T Consensus 234 ~~~~~~~~~ 242 (250)
T PRK14262 234 ERPKNKLTE 242 (250)
T ss_pred hCCCChHHH
Confidence 765444443
No 184
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4.8e-39 Score=382.47 Aligned_cols=216 Identities=25% Similarity=0.414 Sum_probs=190.1
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 4899999999964 359999999999999999999999999999999999999999999999999987653 467899
Q ss_pred EEccccccccc-chhhccCCC-C------CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPL-E------EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~-~------~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
|+||++.+|.. |+++|+... . ..+ ++++.++|+.+++.+...+.| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 99999999975 999999732 1 122 346778899998876655443 468999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||||+++|++|+|||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+|+++++
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998764 6899999999999876 99999999999999999999998
Q ss_pred cCCcHH
Q 039402 1470 NKSSSF 1475 (1496)
Q Consensus 1470 ~~~s~F 1475 (1496)
++...|
T Consensus 227 ~p~~~~ 232 (353)
T PRK10851 227 EPATRF 232 (353)
T ss_pred CccchH
Confidence 766544
No 185
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-39 Score=369.40 Aligned_cols=223 Identities=26% Similarity=0.403 Sum_probs=190.5
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCCC--Ch
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GL 1316 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l 1316 (1496)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 11 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 11 PQIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eeEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 36999999999963 3599999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHHhcccEEEcccccccccchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1317 HDLRSRLSIIPQDPVMFEGTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1317 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
..+|++++|+||+|.+|..|+++|+... ...+ ++++.++++.+++.+.+. ..++ .....||+||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~----~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS---DRLK----SPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh---hhhc----CChhhCCHHHHH
Confidence 5678899999999999999999999631 1122 234677888888754321 1223 345689999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+|+|+++.+.+ ||+|++|++|++++.|+|+++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667999999999999876 9999999999999999999998
Q ss_pred hcCCcHH
Q 039402 1469 ENKSSSF 1475 (1496)
Q Consensus 1469 ~~~~s~F 1475 (1496)
+++...+
T Consensus 242 ~~~~~~~ 248 (258)
T PRK14268 242 HNPREKS 248 (258)
T ss_pred cCCCCHH
Confidence 7654443
No 186
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.2e-38 Score=365.83 Aligned_cols=217 Identities=40% Similarity=0.684 Sum_probs=194.9
Q ss_pred CCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCeeEEEccCCccC
Q 039402 614 SETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQ 693 (1496)
Q Consensus 614 ~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~~~yv~Q~~~i~ 693 (1496)
....++++|+++.+ +++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.++|++|+++++
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~~~l~ 110 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQFSWIM 110 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCccccc
Confidence 44579999999852 4699999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCC
Q 039402 694 SGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAV 773 (1496)
Q Consensus 694 ~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saL 773 (1496)
+.|++||+.++....+.++.+.++++++.+.+..++.+.++.+++++.+||||||||++||||++.+|+++||||||++|
T Consensus 111 ~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gL 190 (282)
T cd03291 111 PGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYL 190 (282)
T ss_pred ccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 99999999997655555667778888888888889998888999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcch
Q 039402 774 DAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDF 835 (1496)
Q Consensus 774 D~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~ 835 (1496)
|+.+...+.+.++....+++|+|++||+++.+..||++++|++|+++..|+.+++.....++
T Consensus 191 D~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 252 (282)
T cd03291 191 DVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLRPDF 252 (282)
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcchHH
Confidence 99998888766655555689999999999998889999999999999999999887543333
No 187
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-39 Score=371.75 Aligned_cols=215 Identities=28% Similarity=0.432 Sum_probs=188.8
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|+++.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 59999999999744456999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcccc--cccccchhhccCCC---CCCcHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1325 IIPQDP--VMFEGTVRSNLDPL---EESTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1325 iIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
|+||+| .++..|+++|+... ...+++ .+.+++++.++.+...+. ..+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKE-----------PQNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------cccCCHHHHHHHHHHH
Confidence 999998 45677999999642 122333 356677888876654443 3589999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||+++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998653 4899999999999888999999999999999999998764
No 188
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-39 Score=367.74 Aligned_cols=223 Identities=24% Similarity=0.428 Sum_probs=193.8
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1317 (1496)
.++++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|+|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 4789999999964 359999999999999999999999999999999999975 389999999999875 3467
Q ss_pred HHhcccEEEcccccccccchhhccCCC-C--CC-----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPL-E--ES-----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~-~--~~-----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
++|++++|+||+|.+|.+|+++|+... . .. .++++.++++.+++.+.+... ....+.+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHHH
Confidence 789999999999999999999999732 1 11 124567789999987765432 23456789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|+|||||++++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999887 8999999999999999999998
Q ss_pred hcCCcHHH
Q 039402 1469 ENKSSSFS 1476 (1496)
Q Consensus 1469 ~~~~s~F~ 1476 (1496)
+.+.+.+.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14266 234 INPKDKRT 241 (250)
T ss_pred hCCCChHH
Confidence 77665543
No 189
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-39 Score=366.93 Aligned_cols=223 Identities=24% Similarity=0.442 Sum_probs=191.5
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CccEEEECCeeCCCC--C
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE--P---AAGQILIDGIDISLI--G 1315 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~i--~ 1315 (1496)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999974 359999999999999999999999999999999999986 4 689999999999754 4
Q ss_pred hHHHhcccEEEcccccccc-cchhhccCC-C---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 039402 1316 LHDLRSRLSIIPQDPVMFE-GTVRSNLDP-L---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1386 (1496)
Q Consensus 1316 l~~LR~~i~iIpQdp~LF~-gTIR~NLdp-~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1386 (1496)
...+|++++++||++.+|. .|+++|+.. + ...+ ++++.++++.+++.+.+... ....+.+||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR-------LKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH-------hhCCcCcCCHH
Confidence 4578899999999999998 599999963 1 1111 34567788888886544322 22346789999
Q ss_pred HHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChh
Q 039402 1387 QRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1387 QrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~ 1465 (1496)
||||++||||++++|++|||||||++||+.+...+.+.|++..++.|||+++|+++.+.. ||+|++|++|+|++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988777899999999999865 9999999999999999999
Q ss_pred hHhhcCCcH
Q 039402 1466 NLLENKSSS 1474 (1496)
Q Consensus 1466 ~Ll~~~~s~ 1474 (1496)
++..++...
T Consensus 233 ~~~~~~~~~ 241 (252)
T PRK14256 233 KIFTTPEKK 241 (252)
T ss_pred HHHhCCCcH
Confidence 998765443
No 190
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.7e-39 Score=364.17 Aligned_cols=211 Identities=27% Similarity=0.390 Sum_probs=182.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.+. ++++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 789999999964 35999999999999999999999999999999999999999999999999998776543 458999
Q ss_pred Ecccccc-cccchhhccCCCC---CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVM-FEGTVRSNLDPLE---EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~L-F~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+ +..|+++|+.... ..+ ++++.+.++..++.+. ......+||+|||||++||||+
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHHH
Confidence 9999987 5679999996421 122 2345666776666433 2334468999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999999875 37899999999999988999999999999999999999864
No 191
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-39 Score=361.60 Aligned_cols=202 Identities=26% Similarity=0.402 Sum_probs=176.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++++.+ ..++++++
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998654 35778999
Q ss_pred Ecccccccc-cchhhccCCC-C--CC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFE-GTVRSNLDPL-E--ES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~-gTIR~NLdp~-~--~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|. .|+++|+... . .. .++++.++++.+++.+...+.+ .+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999886 5999999631 1 11 2345778888888876544433 57999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
+++|++|||||||++||+++...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999998866 9999999999998865
No 192
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-39 Score=374.39 Aligned_cols=214 Identities=29% Similarity=0.429 Sum_probs=187.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCC--CCChHHHhcc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS--LIGLHDLRSR 1322 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~--~i~l~~LR~~ 1322 (1496)
.|+++|++++|+++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+..++|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 59999999999633 45999999999999999999999999999999999999999999999999984 3446678999
Q ss_pred cEEEcccc--cccccchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHH
Q 039402 1323 LSIIPQDP--VMFEGTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCL 1393 (1496)
Q Consensus 1323 i~iIpQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~L 1393 (1496)
++|+||+| .+|+.|+++|+... ...+ ++.+.++++.+++.+... ....+||+|||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKD-----------KPTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-----------CCcccCCHHHHHHHHH
Confidence 99999998 57899999999631 1223 234677788888865432 3356899999999999
Q ss_pred HHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhc-ccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1394 GRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVI-DSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1394 ARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||||+.+|+||||||||++||+.+...+.+.|++..+ ++|||+++|+++.+. .||||++|++|++++.|+++++++.
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998754 789999999999997 4999999999999999999999863
No 193
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-39 Score=367.43 Aligned_cols=219 Identities=29% Similarity=0.430 Sum_probs=188.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CccEEEECCeeCCCC--ChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE--P---AAGQILIDGIDISLI--GLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~i--~l~ 1317 (1496)
.++++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ | ++|+|.+||.++... ...
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 5899999999964 359999999999999999999999999999999999953 6 499999999999753 345
Q ss_pred HHhcccEEEcccccccccchhhccCCC----CC----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPL----EE----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++++||+|.+|+.|+++|+... +. ..++++.++++.+++.+.+.. .......+||+||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999999621 11 123456778888887654332 233455789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|++|||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999865 9999999999999999999998
Q ss_pred hcCC
Q 039402 1469 ENKS 1472 (1496)
Q Consensus 1469 ~~~~ 1472 (1496)
+++.
T Consensus 236 ~~~~ 239 (252)
T PRK14239 236 MNPK 239 (252)
T ss_pred hCCC
Confidence 7654
No 194
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.7e-39 Score=362.42 Aligned_cols=212 Identities=25% Similarity=0.443 Sum_probs=179.7
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH-hcccE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RSRLS 1324 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i~ 1324 (1496)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988877664 67899
Q ss_pred EEccccccccc-chhhccCCCCC-Cc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHc
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPLEE-ST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLL 1398 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~~~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALL 1398 (1496)
++||+|.+|.+ |+++|+..... +. .+++.++++..+ +++........+||+|||||++||||++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~laral~ 148 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP----------RLKERRKQLAGTLSGGEQQMLAIARALM 148 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH----------hhhhhhhCchhhCCHHHHHHHHHHHHHh
Confidence 99999999987 99999964221 11 122333444331 1222233445679999999999999999
Q ss_pred cCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1399 KRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1399 r~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
++|++|+|||||++||+++...+.+.|++.. .++|+|+++|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 149 SRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999998865 47899999999999866 99999999999999999988764
No 195
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-39 Score=364.10 Aligned_cols=208 Identities=25% Similarity=0.344 Sum_probs=181.2
Q ss_pred eEEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH---H
Q 039402 1245 KIDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---L 1319 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---L 1319 (1496)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.+. +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cccEEEccccccccc-chhhccCC---CCCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1320 R-SRLSIIPQDPVMFEG-TVRSNLDP---LEES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1320 R-~~i~iIpQdp~LF~g-TIR~NLdp---~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
| ++++|+||+|.+|.+ |+++|+.. +... .++++.++++.+++.+...+. ..+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHR-----------PSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHH
Confidence 3 679999999999876 99999863 1121 234577888888876544332 35799999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcccCEEEEEeCCeEeEecC
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDN 1463 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~ 1463 (1496)
++||||++++|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+..+|++++|++|+|++.++
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999864 4789999999999999999999999999998765
No 196
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-39 Score=373.05 Aligned_cols=217 Identities=27% Similarity=0.404 Sum_probs=187.3
Q ss_pred EEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH----hcc
Q 039402 1247 DLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL----RSR 1322 (1496)
Q Consensus 1247 ~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L----R~~ 1322 (1496)
.++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 46688888864 358999999999999999999999999999999999999999999999999988765543 468
Q ss_pred cEEEcccccccc-cchhhccCCC---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1323 LSIIPQDPVMFE-GTVRSNLDPL---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1323 i~iIpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
++++||+|.+|. .|+++|+... ... .++++.++++.+++.+.+...| .+||+|||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 999999999885 5999999631 111 2345778899999877665554 36899999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcC
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~ 1471 (1496)
||++++|+||||||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999998643 7899999999999865 9999999999999999999998766
Q ss_pred CcHHH
Q 039402 1472 SSSFS 1476 (1496)
Q Consensus 1472 ~s~F~ 1476 (1496)
...|.
T Consensus 253 ~~~~~ 257 (269)
T cd03294 253 ANDYV 257 (269)
T ss_pred CcHHH
Confidence 55443
No 197
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-39 Score=367.74 Aligned_cols=221 Identities=24% Similarity=0.412 Sum_probs=189.4
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE--P---AAGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~--i~l~ 1317 (1496)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999987 3 59999999999864 4456
Q ss_pred HHhcccEEEcccccccccchhhccCCC----CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPL----EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++|+||+|.+|.+|+++|+... +..+ ++++.++++..++.+.+.. .......+||+||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD-------RLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHH
Confidence 788999999999999999999999532 1112 2345667888887654422 123455689999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.+ ||+|++|++|++++.|+|++++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999987677999999999999875 9999999999999999999998
Q ss_pred hcCCcH
Q 039402 1469 ENKSSS 1474 (1496)
Q Consensus 1469 ~~~~s~ 1474 (1496)
+++...
T Consensus 243 ~~~~~~ 248 (259)
T PRK14274 243 SNPDDQ 248 (259)
T ss_pred hCCCCH
Confidence 765443
No 198
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=7.5e-39 Score=367.81 Aligned_cols=218 Identities=28% Similarity=0.434 Sum_probs=188.7
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC-------
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG------- 1315 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~------- 1315 (1496)
.+.++++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 35999999999999999999999999999999999999999999999999986431
Q ss_pred ------hHHHhcccEEEccccccccc-chhhccCCC----CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 039402 1316 ------LHDLRSRLSIIPQDPVMFEG-TVRSNLDPL----EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1380 (1496)
Q Consensus 1316 ------l~~LR~~i~iIpQdp~LF~g-TIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1380 (1496)
...+|++++++||+|.+|.+ |+++|+... ... .++++.+++++.++.+... ....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCCc
Confidence 34678899999999999975 999999631 111 2345778888888865532 1234
Q ss_pred CCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeE
Q 039402 1381 ENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLI 1458 (1496)
Q Consensus 1381 ~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~I 1458 (1496)
..||+|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6799999999999999999999999999999999999999999998864 37999999999999987 999999999999
Q ss_pred eEecChhhHhhcCC
Q 039402 1459 EEFDNPANLLENKS 1472 (1496)
Q Consensus 1459 vE~g~p~~Ll~~~~ 1472 (1496)
++.|+++++++.+.
T Consensus 231 ~~~~~~~~~~~~~~ 244 (257)
T PRK10619 231 EEEGAPEQLFGNPQ 244 (257)
T ss_pred EEeCCHHHhhhCcc
Confidence 99999999986543
No 199
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-39 Score=368.97 Aligned_cols=219 Identities=25% Similarity=0.466 Sum_probs=188.7
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1317 (1496)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 6999999999964 459999999999999999999999999999999999865 789999999999875 3445
Q ss_pred HHhcccEEEcccccccccchhhccCCC----CC----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPL----EE----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++|+||+|.+|.+|+++|+... .. ..++.+.++++.+++.+.+.. .......+||+||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKD-------RLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999998631 11 123457778888887533321 123446789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|++++++
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988667899999999998865 9999999999999999999998
Q ss_pred hcCC
Q 039402 1469 ENKS 1472 (1496)
Q Consensus 1469 ~~~~ 1472 (1496)
.++.
T Consensus 252 ~~~~ 255 (268)
T PRK14248 252 TSPK 255 (268)
T ss_pred hCCC
Confidence 7643
No 200
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-39 Score=365.81 Aligned_cols=222 Identities=28% Similarity=0.464 Sum_probs=190.8
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCC--CCh
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGL 1316 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l 1316 (1496)
|.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999964 3599999999999999999999999999999999999863 69999999999875 455
Q ss_pred HHHhcccEEEcccccccccchhhccCCCC---C-C----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1317 HDLRSRLSIIPQDPVMFEGTVRSNLDPLE---E-S----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1317 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
..+|++++++||+|.+|..|+++|+.... . . .++++.++++.+++.+.+.. .......+||+|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD-------RLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH-------HHhcCCCCCCHHHH
Confidence 67899999999999999999999996321 1 1 23456777888887654432 22345578999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
||++||||++++|++|+|||||++||+.+...+.+.|++.-+++|||+++|+++.+.+ ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999998876 999999999999999999999
Q ss_pred hhcCCcH
Q 039402 1468 LENKSSS 1474 (1496)
Q Consensus 1468 l~~~~s~ 1474 (1496)
..++...
T Consensus 233 ~~~~~~~ 239 (250)
T PRK14240 233 FTNPKDK 239 (250)
T ss_pred HhCCCCh
Confidence 8654433
No 201
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-39 Score=371.19 Aligned_cols=202 Identities=33% Similarity=0.439 Sum_probs=174.5
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEE
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~y 685 (1496)
.++++|++.+|.. ..+++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++|+ +|+
T Consensus 3 ~i~l~~v~K~yg~---~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGS---FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 5899999999962 12999999999999999999999999999999999999999999999995 599
Q ss_pred EccCCccCC-CcHHHHhccCCCCC-------HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 686 VAQSPWIQS-GKIEDNILFGKEMN-------RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 686 v~Q~~~i~~-~ti~eNI~~g~~~~-------~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
|+|+.-++. .||+|||.||.... +++.+++.+..++++.++ +++.+|||||||||||||||
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~-----------r~P~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLN-----------RKPLQLSGGQRQRVALARAL 148 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHh-----------cCcccCChhhHHHHHHHHHH
Confidence 999999875 59999999997542 455566666666665554 56789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
.++|+++|||||+|+||++....+-.++.+... -+.|+|+||||..++. .+|+|++|++|+|.+.|++.|+.+..
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 999999999999999999998888666544332 3789999999987765 59999999999999999999997653
No 202
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-39 Score=367.96 Aligned_cols=221 Identities=27% Similarity=0.414 Sum_probs=190.6
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCC--CCh
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGL 1316 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l 1316 (1496)
+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ...
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 3599999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHHhcccEEEcccccccccchhhccCCC-------CCCc-HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1317 HDLRSRLSIIPQDPVMFEGTVRSNLDPL-------EEST-DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1317 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~-------~~~s-d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
..+|.+++++||+|.+|+.|+++|+... .+.. ++.+.++++.+++.+.+... ....+..||+|||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK-------LNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 6788899999999999999999999631 1112 23466888888887554322 2345678999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEe-----CCeEeEec
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLN-----HGLIEEFD 1462 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~-----~G~IvE~g 1462 (1496)
||+||||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999987777999999999999976 99999998 59999999
Q ss_pred ChhhHhhcCCc
Q 039402 1463 NPANLLENKSS 1473 (1496)
Q Consensus 1463 ~p~~Ll~~~~s 1473 (1496)
+++++++++..
T Consensus 237 ~~~~~~~~~~~ 247 (259)
T PRK14260 237 VTTQIFSNPLD 247 (259)
T ss_pred CHHHHhcCCCC
Confidence 99999876543
No 203
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=376.32 Aligned_cols=224 Identities=25% Similarity=0.397 Sum_probs=190.2
Q ss_pred eEEEEeEEeEeCCC--------CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCCh
Q 039402 1245 KIDLLDLQVRYAPQ--------MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL 1316 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~--------~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l 1316 (1496)
-|+++|++++|+.. ...+|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 58999999999631 2469999999999999999999999999999999999999999999999999998864
Q ss_pred ---HHHhcccEEEccccc--cccc-chhhccC-CC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCC
Q 039402 1317 ---HDLRSRLSIIPQDPV--MFEG-TVRSNLD-PL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGEN 1382 (1496)
Q Consensus 1317 ---~~LR~~i~iIpQdp~--LF~g-TIR~NLd-p~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1382 (1496)
..+|++|++|||||. |+.. |+.+|+. +. ...+ .+++.++|+++++.+. .++. ....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~------~~~~----~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPE------HYDR----YPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChH------HhcC----CCcc
Confidence 356889999999994 5553 8888874 21 1112 3457888999988632 1222 2357
Q ss_pred CCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEe
Q 039402 1383 WSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIE 1459 (1496)
Q Consensus 1383 LS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~Iv 1459 (1496)
||||||||++|||||+.+|+|||+||||++||..+.+.|.+.|++..+ ++|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999988653 7899999999999975 9999999999999
Q ss_pred EecChhhHhhcCCcHHHHH
Q 039402 1460 EFDNPANLLENKSSSFSQL 1478 (1496)
Q Consensus 1460 E~g~p~~Ll~~~~s~F~~l 1478 (1496)
|.|+++++++++...|.+.
T Consensus 235 e~g~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQA 253 (327)
T ss_pred EECCHHHHhcCCCCHHHHH
Confidence 9999999998765555543
No 204
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-39 Score=371.10 Aligned_cols=214 Identities=23% Similarity=0.361 Sum_probs=189.4
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
-++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999643 34999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcccc--cccccchhhccCCCC---CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1325 IIPQDP--VMFEGTVRSNLDPLE---EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1325 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
++||+| .+|+.|+++|+.... ..+ ++.+.++++.+++.+.....| ..||+|||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 478889999996211 222 345788899999876655543 468999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhc-ccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVI-DSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999988653 789999999999996 5999999999999999999999854
No 205
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.3e-39 Score=377.21 Aligned_cols=222 Identities=23% Similarity=0.366 Sum_probs=189.7
Q ss_pred eEEEEeEEeEeCCC-----------CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCC
Q 039402 1245 KIDLLDLQVRYAPQ-----------MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL 1313 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~-----------~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~ 1313 (1496)
-++++|++++|... ...+++|+||+|++||.+||||+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 59999999999631 2469999999999999999999999999999999999999999999999999998
Q ss_pred CChHH---HhcccEEEcccc--ccc-ccchhhccCC----CC-CCcH----HHHHHHHHHcCCcH-HHHhccCCcccccc
Q 039402 1314 IGLHD---LRSRLSIIPQDP--VMF-EGTVRSNLDP----LE-ESTD----EQIWEALDKCQLGD-EVRKKEGKLDSKVT 1377 (1496)
Q Consensus 1314 i~l~~---LR~~i~iIpQdp--~LF-~gTIR~NLdp----~~-~~sd----~eI~~aL~~~~L~~-~i~~lp~gLdt~v~ 1377 (1496)
++..+ +|++++|||||| .+| ..||++|+.. +. ..+. +.+.++++.+++.+ ...+
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~---------- 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINR---------- 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcC----------
Confidence 87544 678999999999 477 4699999851 11 2332 34567788888743 2222
Q ss_pred cCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEe
Q 039402 1378 ENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLN 1454 (1496)
Q Consensus 1378 e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~ 1454 (1496)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|++.-+ +.|+|+|||+++.+.. ||||+||+
T Consensus 158 -~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~ 236 (331)
T PRK15079 158 -YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMY 236 (331)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 3457999999999999999999999999999999999999999999987643 7899999999999986 99999999
Q ss_pred CCeEeEecChhhHhhcCCcHHHH
Q 039402 1455 HGLIEEFDNPANLLENKSSSFSQ 1477 (1496)
Q Consensus 1455 ~G~IvE~g~p~~Ll~~~~s~F~~ 1477 (1496)
+|+|+|.|+++++++++...|.+
T Consensus 237 ~G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 237 LGHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CCEEEEEcCHHHHHcCCCCHHHH
Confidence 99999999999999876555654
No 206
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-36 Score=336.54 Aligned_cols=467 Identities=21% Similarity=0.289 Sum_probs=335.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCchhHHHHHhhhHHHHHhhhhHHHHHHHH
Q 039402 969 IVYVALAVGSSFCVLARSTLLATAGYKTATLLFNEMHYCIFRAPMSFFDATPSGRIINRASTDQSAADLGIPSLVGAYAF 1048 (1496)
Q Consensus 969 ~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~GrIlnR~s~D~~~vd~~l~~~~~~~~~ 1048 (1496)
.-|.++..+-.+...+.......+|.+.-.+++.++.++++.+|+.-+++-..+|++.++++|+.++... ...+..+.+
T Consensus 52 ~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~-~s~lp~~~q 130 (546)
T COG4615 52 PEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFA-FSRLPELVQ 130 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeeh-HhhhHHHHH
Confidence 3344444444455566677788899999999999999999999999999999999999999999999843 333455778
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhcchHHHHHhccHHHHHH
Q 039402 1049 SIIRILGTIAVMSQVAWQVFIVFVPAVGSCIWYQQYYISSARELSRLVGVCKAPVIQHFAETVSGSTTIRSFDQESRFRD 1128 (1496)
Q Consensus 1049 ~~~~~l~~~~~~~~~~~~~~~~~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~~~~f~~ 1128 (1496)
+.+..+++.+.+++.+|+++.+.+..+++.++.+..-++..-+-.+.-.++...+.++++..++|.+..+..+...+...
T Consensus 131 a~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h 210 (546)
T COG4615 131 AIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVH 210 (546)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHH
Confidence 88888999999999999988776655554444332221111111112223345678899999999999888765544433
Q ss_pred HHH------HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH---HHHHHHHHH
Q 039402 1129 RNM------KLMDEYSRPTFHIAAAMEWLGLRLDMLSSITFAFTLVFLISIPKGFIDPAIAGLAVTYG---LTLNTLLAT 1199 (1496)
Q Consensus 1129 ~~~------~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~g~~~~g~~gl~l~y~---l~l~~~l~~ 1199 (1496)
... ..-+...+.......+..|..+.+-.+..++ +.+.+..+.-+.. .+.++. +-+-.++..
T Consensus 211 ~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlv------f~lal~~~w~st~---~a~tivlvlLflr~pL~s 281 (546)
T COG4615 211 NNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLV------FWLALSLGWASTN---VAATIVLVLLFLRTPLLS 281 (546)
T ss_pred hhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHH------HHHHHhhccchhh---HHHHHHHHHHHHhhHHHH
Confidence 322 1111222222222344455554332222211 1111111211111 222233 334556666
Q ss_pred HHHHHHHHHHhHhHHHHHHHhhcCCCCCCCCccCCCCCCCCCCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEE
Q 039402 1200 LIWFACDLENKIISVERIFQYTCIPSEPPLAIEESRPNDSWPSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIV 1279 (1496)
Q Consensus 1200 ~i~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIV 1279 (1496)
++-..-.+-..-++..||.++...|..+. .+...+.++| ..||++||.|.|.++. --+..||++|+.||.|=|+
T Consensus 282 ~vgilP~l~~AqvA~~kiakle~~~~~a~--~~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFli 355 (546)
T COG4615 282 AVGILPTLLTAQVAFNKIAKLELAPYKAD--FPRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFLI 355 (546)
T ss_pred HHhhhhHHHHHHHHHHHHHHhhcCCcccc--CCCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEEEE
Confidence 77777777788899999998876333221 1222233335 4799999999998764 3478899999999999999
Q ss_pred cCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHc
Q 039402 1280 GRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKC 1359 (1496)
Q Consensus 1280 GrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~ 1359 (1496)
|.+||||||++++|.|++.|++|+|++||.+++.-++++.|+-++-|.-|-+||+.++ -|-+..+.+.|-.-|++.
T Consensus 356 G~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~LqrL 431 (546)
T COG4615 356 GGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQRL 431 (546)
T ss_pred CCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998765 344456777777777777
Q ss_pred CCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEE
Q 039402 1360 QLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTI 1437 (1496)
Q Consensus 1360 ~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~I 1437 (1496)
.+.....-..+.+. ...||-|||.|+++--|+|-+.+|+++||=-|--||.=++...+.+--.. .|+||+.|
T Consensus 432 el~~ktsl~d~~fs------~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aI 505 (546)
T COG4615 432 ELAHKTSLNDGRFS------NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAI 505 (546)
T ss_pred HHhhhhcccCCccc------ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEE
Confidence 66544332222121 13589999999999999999999999999999999999998887764433 48999999
Q ss_pred ccCcchhcccCEEEEEeCCeEeEe
Q 039402 1438 AHRITSVIDSDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1438 AHRl~ti~~~DrIlVL~~G~IvE~ 1461 (1496)
+|+=+-...+||++-|++|+++|.
T Consensus 506 sHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 506 SHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred ecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999985
No 207
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-39 Score=359.81 Aligned_cols=208 Identities=27% Similarity=0.386 Sum_probs=182.2
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++|+++++
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999998763 3567889999
Q ss_pred Eccccccccc-chhhccCCC---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPL---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|.+ |+++|+... ... .++++.++++..++.+.....+ .+||+|||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----------KTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999998876 999999531 111 2456788899998876544433 46899999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
+.+|++|+|||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999988653 6899999999999876 999999999999999998764
No 208
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6.2e-39 Score=359.58 Aligned_cols=205 Identities=26% Similarity=0.402 Sum_probs=178.8
Q ss_pred EEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1246 IDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 78999999996532 269999999999999999999999999999999999999999999999999976 456788999
Q ss_pred EEEccccccccc-chhhccCCC---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPL---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
+++||+|.+|.+ |+++|+... ... .++++.+++++.++.+...+ ...+||+|||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDR-----------RVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhh-----------hhhhcCHHHHHHHHHHH
Confidence 999999999986 999998521 111 23467788888887655443 34578999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
|++++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|+|+++.+.+ ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999864 47899999999999876 9999999999998865
No 209
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-39 Score=370.45 Aligned_cols=215 Identities=27% Similarity=0.389 Sum_probs=190.1
Q ss_pred eEEEEeEEeEeCCC-CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1245 KIDLLDLQVRYAPQ-MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~-~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
-|+++||+++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcccc--cccccchhhccCCC-C--CCcHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDP--VMFEGTVRSNLDPL-E--ESTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp--~LF~gTIR~NLdp~-~--~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
+|+||+| .++..|+.+||... . ..+++ ++.++++.+++.+..... ...||+|||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 47788999999632 1 23333 356788888887654433 357899999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|||+++|+||||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+..||+|++|++|++++.|++++++++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999987754 7899999999999988999999999999999999999864
No 210
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.3e-39 Score=375.96 Aligned_cols=213 Identities=27% Similarity=0.413 Sum_probs=186.2
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
..|+++||+++|.. ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.|+|.|+...+ ...|++|
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 46999999999999999999999999999999999999999999999999998754 4578999
Q ss_pred EEEcccccccc-cchhhccCCCC---CCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1324 SIIPQDPVMFE-GTVRSNLDPLE---ESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1324 ~iIpQdp~LF~-gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
||+||+|.+|. .|+++|+..+. ..++ +++.++++.+++.+. .++++ .+||+|||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-------ADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-------hcCch----hhCCHHHHHHHHHHH
Confidence 99999999886 59999997322 1222 345677777777543 33333 469999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||+++|++|+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+|+++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999875 37899999999999976 999999999999999999999764
No 211
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=364.81 Aligned_cols=219 Identities=26% Similarity=0.434 Sum_probs=189.7
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----ccEEEECCeeCCCC--ChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPA-----AGQILIDGIDISLI--GLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~i--~l~ 1317 (1496)
.|+++|++++|.. +++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 6899999999964 45999999999999999999999999999999999999987 69999999998753 456
Q ss_pred HHhcccEEEcccccccccchhhccCCCC---C-C----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPLE---E-S----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++++||+|.+|.+|+++|+.... . . .++.+.++++..++.+.+.. .....+.+||+||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHHH
Confidence 7899999999999999999999996321 1 1 12345667777777654432 234567789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|++|||||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999987 7999999999999999999997
Q ss_pred hcCC
Q 039402 1469 ENKS 1472 (1496)
Q Consensus 1469 ~~~~ 1472 (1496)
..+.
T Consensus 235 ~~~~ 238 (251)
T PRK14249 235 SRPR 238 (251)
T ss_pred hCCC
Confidence 6543
No 212
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=368.14 Aligned_cols=221 Identities=25% Similarity=0.414 Sum_probs=192.3
Q ss_pred CcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCC--C
Q 039402 1242 SHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--I 1314 (1496)
Q Consensus 1242 ~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i 1314 (1496)
..+.|+++|++++|.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.|+.. .
T Consensus 22 ~~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 22 EQTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CCcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 3457999999999964 3599999999999999999999999999999999999884 89999999999875 3
Q ss_pred ChHHHhcccEEEcccccccccchhhccCCC---CC--C---cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 039402 1315 GLHDLRSRLSIIPQDPVMFEGTVRSNLDPL---EE--S---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1386 (1496)
Q Consensus 1315 ~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~--~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1386 (1496)
+...+|++++|+||++.+|.+|+++|+... .. . .++++.++++.+++.+.+.. .....+.+||+|
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHH
Confidence 456789999999999999999999999632 11 1 13457888888888765432 234456789999
Q ss_pred HHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChh
Q 039402 1387 QRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1387 QrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~ 1465 (1496)
||||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999988778999999999999875 9999999999999999999
Q ss_pred hHhhcC
Q 039402 1466 NLLENK 1471 (1496)
Q Consensus 1466 ~Ll~~~ 1471 (1496)
++.+++
T Consensus 253 ~~~~~~ 258 (272)
T PRK14236 253 TLFTSP 258 (272)
T ss_pred HHhcCC
Confidence 998654
No 213
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=8.9e-39 Score=366.21 Aligned_cols=215 Identities=27% Similarity=0.440 Sum_probs=186.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC----------
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG---------- 1315 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---------- 1315 (1496)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 35999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHHHhcccEEEcccccccc-cchhhccCCC----CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 039402 1316 ---LHDLRSRLSIIPQDPVMFE-GTVRSNLDPL----EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1383 (1496)
Q Consensus 1316 ---l~~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1383 (1496)
...+|++++++||++.+|. .|+++|+... ... .++++.++++..++.+...+. ...|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHM-----------PAQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcC-----------hhhc
Confidence 2467889999999999885 7999999631 111 234577888888876654433 3578
Q ss_pred CchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeE
Q 039402 1384 SMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1384 S~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE 1460 (1496)
|+|||||++||||++++|++|+|||||++||+.+...+.+.|++..+ ++|+|+|+|+++.+.+ ||++++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999965 99999999999999
Q ss_pred ecChhhHhhcCCc
Q 039402 1461 FDNPANLLENKSS 1473 (1496)
Q Consensus 1461 ~g~p~~Ll~~~~s 1473 (1496)
.|+++++.+++..
T Consensus 228 ~g~~~~~~~~~~~ 240 (252)
T TIGR03005 228 QGKPDEIFRQPKE 240 (252)
T ss_pred eCCHHHHhcCCCc
Confidence 9999999876543
No 214
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.5e-39 Score=384.32 Aligned_cols=220 Identities=27% Similarity=0.436 Sum_probs=194.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.++++|++++|.. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+++..++|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccccc-cccchhhccCCCC-----------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1325 IIPQDPVM-FEGTVRSNLDPLE-----------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1325 iIpQdp~L-F~gTIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
++||++.+ |+.|+++|+.... ..+++.+.++++.+++.+...+. ..+||+|||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----------~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----------VTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHH
Confidence 99999987 6779999995321 12245688999999997665432 3579999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|||||+++|+||+|||||++||+.+...+.+.|++.. .+.|||+++|+++.+.. ||||++|++|++++.|+|++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999875 47899999999999965 999999999999999999999854
Q ss_pred CCcHHHHHH
Q 039402 1471 KSSSFSQLV 1479 (1496)
Q Consensus 1471 ~~s~F~~l~ 1479 (1496)
..+.+++
T Consensus 230 --~~l~~~~ 236 (402)
T PRK09536 230 --DTLRAAF 236 (402)
T ss_pred --HHHHHHh
Confidence 2344444
No 215
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6.5e-39 Score=381.74 Aligned_cols=218 Identities=23% Similarity=0.413 Sum_probs=192.4
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCc--cEEEECCeeCCCCChHHHh
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAA--GQILIDGIDISLIGLHDLR 1320 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~--G~I~IDG~dI~~i~l~~LR 1320 (1496)
.|.|+++||+++|.. ..+|+|+||+|++||.+||+|+||||||||+++|.|+.+|++ |+|.+||.++...+. .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 478999999999964 359999999999999999999999999999999999999999 999999999987665 35
Q ss_pred cccEEEccccccccc-chhhccCC-CC--CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1321 SRLSIIPQDPVMFEG-TVRSNLDP-LE--EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1321 ~~i~iIpQdp~LF~g-TIR~NLdp-~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
++|++++|++.+|.. |+++|+.. .. ..+ ++++.++++.++|.+...+.| .+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 789999999999976 99999962 21 222 245777888888877666555 468999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC---CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS---DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~---~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|||||+++|++|+||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999987654 6899999999999866 9999999999999999999999
Q ss_pred hcCCcHH
Q 039402 1469 ENKSSSF 1475 (1496)
Q Consensus 1469 ~~~~s~F 1475 (1496)
+++...|
T Consensus 228 ~~p~~~~ 234 (362)
T TIGR03258 228 DAPADGF 234 (362)
T ss_pred hCcCcHH
Confidence 8876655
No 216
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2e-38 Score=360.08 Aligned_cols=218 Identities=29% Similarity=0.434 Sum_probs=190.3
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~ 684 (1496)
++++|+++.|+. ..+++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~-~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKP-DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCC-CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 468899999953 2357999999999999999999999999999999999999999999999883 69
Q ss_pred EEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 039402 685 YVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDI 763 (1496)
Q Consensus 685 yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1496)
|++|++++++.|++||+.++.. ...++..+.++..++.+.++.+|.|.++..++++.+|||||||||+||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999999999999998653 334445555666777777888888888888999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcchHH
Q 039402 764 YLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTDFME 837 (1496)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~~~~ 837 (1496)
+||||||++||+.+...+.+. +..+.+++|+|++||+++++..||++++|++|++++.|+.+++.+....|..
T Consensus 160 lllDEP~~~LD~~~~~~l~~~-l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 232 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRN-MHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAY 232 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHH-HHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHH
Confidence 999999999999998888654 5545568999999999999877999999999999999999998876554544
No 217
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.3e-39 Score=356.56 Aligned_cols=198 Identities=25% Similarity=0.382 Sum_probs=174.2
Q ss_pred EEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEE
Q 039402 1247 DLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSII 1326 (1496)
Q Consensus 1247 ~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1326 (1496)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 459999999999999999999999999999999999999999999999999864 4577889999
Q ss_pred cccc--cccccchhhccCCCC---CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 039402 1327 PQDP--VMFEGTVRSNLDPLE---ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS 1401 (1496)
Q Consensus 1327 pQdp--~LF~gTIR~NLdp~~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~ 1401 (1496)
||+| .+|..|+++|+.... ...++++.++++.+++.+...+.| ..||+|||||++||||++++|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhCC
Confidence 9998 467899999997421 123457889999999877655444 368999999999999999999
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEe
Q 039402 1402 KILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIE 1459 (1496)
Q Consensus 1402 ~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~Iv 1459 (1496)
++|+|||||++||+.+.+.+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999863 57899999999999976 9999999999985
No 218
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.4e-39 Score=360.82 Aligned_cols=202 Identities=29% Similarity=0.418 Sum_probs=175.3
Q ss_pred EEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH----H
Q 039402 1246 IDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD----L 1319 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~----L 1319 (1496)
|+++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996531 46999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcccEEEccccccccc-chhhccCCC---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1320 RSRLSIIPQDPVMFEG-TVRSNLDPL---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1320 R~~i~iIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
|++++|+||+|.+|.+ |+++|+... ... .++++.++++..++.+...+. ..+||+|||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHY-----------PSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcC-----------hhhcCHHHHHHH
Confidence 6789999999999987 999999632 111 234677888888876554333 357999999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEeCCeE
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLNHGLI 1458 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~I 1458 (1496)
+||||++++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888999999999975
No 219
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-39 Score=383.96 Aligned_cols=216 Identities=20% Similarity=0.360 Sum_probs=189.3
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCEE
Confidence 4899999999964 359999999999999999999999999999999999999999999999999987664 356899
Q ss_pred EEccccccccc-chhhccCCC-C--CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPL-E--EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
|+||++.+|.. |+++|+... . ..+ ++++.++++.+++.+...+.| .+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 999999632 1 122 345788899998876554443 4689999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCc
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSS 1473 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s 1473 (1496)
|+++|++|+||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++..
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~ 227 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPAN 227 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999988653 7899999999998875 999999999999999999999987665
Q ss_pred HH
Q 039402 1474 SF 1475 (1496)
Q Consensus 1474 ~F 1475 (1496)
.|
T Consensus 228 ~~ 229 (369)
T PRK11000 228 RF 229 (369)
T ss_pred HH
Confidence 54
No 220
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.1e-38 Score=380.99 Aligned_cols=217 Identities=24% Similarity=0.415 Sum_probs=192.7
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
..++++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++..++.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999964 3589999999999999999999999999999999999999999999999999877654 5689
Q ss_pred EEEccccccccc-chhhccCC-CC--CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDP-LE--EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp-~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
++++|++.+|.. ||++|+.. .. ..+ ++++.++++..++.+...+.| ..||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 99999963 21 122 345778899999987776665 468999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCC
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKS 1472 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~ 1472 (1496)
||+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+.+.+.. ||+|++|++|+|++.|+|+++++++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998764 7899999999999765 99999999999999999999998876
Q ss_pred cHH
Q 039402 1473 SSF 1475 (1496)
Q Consensus 1473 s~F 1475 (1496)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 555
No 221
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=368.87 Aligned_cols=221 Identities=25% Similarity=0.458 Sum_probs=190.7
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCCC--C
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISLI--G 1315 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i--~ 1315 (1496)
...|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 37 ~~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 37 ETVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 346999999999964 359999999999999999999999999999999999997 6899999999998653 4
Q ss_pred hHHHhcccEEEcccccccccchhhccCCC------CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1316 LHDLRSRLSIIPQDPVMFEGTVRSNLDPL------EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1316 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~------~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
...+|++++++||+|.+|.+|+++|+... ....++++.++++..++.+.+... ......+||+||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQ-------LDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHH-------HhCCcccCCHHHHH
Confidence 56788999999999999999999999631 111345688889998886544321 23445689999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEE-EEeCCeEeEecChhhH
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVL-LLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIl-VL~~G~IvE~g~p~~L 1467 (1496)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|+|+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5799999999999999
Q ss_pred hhcCC
Q 039402 1468 LENKS 1472 (1496)
Q Consensus 1468 l~~~~ 1472 (1496)
++++.
T Consensus 268 ~~~~~ 272 (285)
T PRK14254 268 FENPE 272 (285)
T ss_pred HhCcC
Confidence 86544
No 222
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-38 Score=353.13 Aligned_cols=201 Identities=59% Similarity=0.988 Sum_probs=182.8
Q ss_pred EEEEeeEEEecCCCC--CCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCeeEEEccCCccCCC
Q 039402 618 LDIVDGNFSWDISSH--NPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSG 695 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~~~yv~Q~~~i~~~ 695 (1496)
++++|+++.|..... +++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|+++|++|+|.+++.
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~ 80 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNG 80 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccC
Confidence 468999999963211 379999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCH
Q 039402 696 KIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDA 775 (1496)
Q Consensus 696 ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~ 775 (1496)
|++||+.++...++++..++.+.+++.+.+..+|.|.++..++++.+||||||||++||||++.+|+++||||||++||+
T Consensus 81 t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~ 160 (204)
T cd03250 81 TIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDA 160 (204)
T ss_pred cHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCH
Confidence 99999999877766677778888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCcEEEEEccCcCccccCCEEEEEeCCe
Q 039402 776 HTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPAADLILVMKDGK 818 (1496)
Q Consensus 776 ~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~ 818 (1496)
+..+.+++.++... .+++|+|++||+++.+..||++++|++|+
T Consensus 161 ~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 161 HVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 99888887666544 34799999999999987899999999985
No 223
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=375.71 Aligned_cols=227 Identities=21% Similarity=0.337 Sum_probs=188.4
Q ss_pred eEEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC----CCccEEEECCeeCCCCChHH
Q 039402 1245 KIDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE----PAAGQILIDGIDISLIGLHD 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e----p~~G~I~IDG~dI~~i~l~~ 1318 (1496)
-++++|+++.|+... ..+|+||||+|++||.+||||+||||||||+++|.|+++ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 489999999996532 359999999999999999999999999999999999997 48999999999999998776
Q ss_pred Hhc----ccEEEccccc--cccc-chhhcc----CCCCCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 039402 1319 LRS----RLSIIPQDPV--MFEG-TVRSNL----DPLEES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1383 (1496)
Q Consensus 1319 LR~----~i~iIpQdp~--LF~g-TIR~NL----dp~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1383 (1496)
+|+ +|++|||||. ++.. |+.+|+ ...... .++++.++|+++++.+.... ......+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR--------LDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhCCchhC
Confidence 653 6999999995 4432 555544 322111 23567888999998643211 12345679
Q ss_pred CchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhc-ccCEEEEEeCCeEeE
Q 039402 1384 SMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVI-DSDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1384 S~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~IvE 1460 (1496)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+. .||||+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 789999999999995 499999999999999
Q ss_pred ecChhhHhhcCCcHHHHHH
Q 039402 1461 FDNPANLLENKSSSFSQLV 1479 (1496)
Q Consensus 1461 ~g~p~~Ll~~~~s~F~~l~ 1479 (1496)
.|+++++++++...|.+..
T Consensus 235 ~g~~~~~~~~p~hpyt~~l 253 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQAL 253 (326)
T ss_pred ECCHHHHhhCCCChHHHHH
Confidence 9999999987665565433
No 224
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-39 Score=372.53 Aligned_cols=216 Identities=25% Similarity=0.386 Sum_probs=185.3
Q ss_pred eEEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCC----CChH
Q 039402 1245 KIDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL----IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~----i~l~ 1317 (1496)
.|+++|++++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 389999999996432 359999999999999999999999999999999999999999999999999863 3466
Q ss_pred HHhcccEEEcccc--cccccchhhccCCC---CCCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1318 DLRSRLSIIPQDP--VMFEGTVRSNLDPL---EESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
..|++++|+||+| .+|+.|+++|+... ...+. +.+.++++.++|.+.+. ......||+|||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHH
Confidence 7888999999998 68889999999521 11232 34567788888753221 123457999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChh
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~ 1465 (1496)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|+|+++.+.. ||||++|++|++++.|+++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999988653 7899999999999865 9999999999999999999
Q ss_pred hHhhc
Q 039402 1466 NLLEN 1470 (1496)
Q Consensus 1466 ~Ll~~ 1470 (1496)
+++++
T Consensus 232 ~~~~~ 236 (290)
T PRK13634 232 EIFAD 236 (290)
T ss_pred HHhcC
Confidence 98754
No 225
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=373.47 Aligned_cols=215 Identities=21% Similarity=0.314 Sum_probs=184.3
Q ss_pred eEEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCC--------
Q 039402 1245 KIDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL-------- 1313 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~-------- 1313 (1496)
.|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999996543 259999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChHHHhcccEEEcccc--cccccchhhccCCCC---CCc----HHHHHHHHHHcCCc-HHHHh
Q 039402 1314 ----------------IGLHDLRSRLSIIPQDP--VMFEGTVRSNLDPLE---EST----DEQIWEALDKCQLG-DEVRK 1367 (1496)
Q Consensus 1314 ----------------i~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~-~~i~~ 1367 (1496)
.....+|++++|+||+| .+|..|+++||.... ..+ ++++.++++.++|. +...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~- 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ- 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh-
Confidence 13467889999999987 688899999996321 222 34567788888875 3332
Q ss_pred ccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc
Q 039402 1368 KEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID 1446 (1496)
Q Consensus 1368 lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~ 1446 (1496)
....+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+..
T Consensus 161 ----------~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 161 ----------RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ----------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 2345799999999999999999999999999999999999999999998764 47899999999998755
Q ss_pred -cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1447 -SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1447 -~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||||++|++|++++.|+|++++++
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999864
No 226
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1e-38 Score=363.54 Aligned_cols=212 Identities=25% Similarity=0.366 Sum_probs=186.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH-hccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i 1323 (1496)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |.++
T Consensus 2 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 2 ILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred eEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 3789999999964 359999999999999999999999999999999999999999999999999988876654 5679
Q ss_pred EEEccccccccc-chhhccCCCCC------------C---cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLEE------------S---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~~------------~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
+++||++.+|.+ |+++|++.... . .++++.++++..++.+.. .....+||+||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-----------DRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHH
Confidence 999999999987 99999964211 1 234567777777765432 23346799999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhh
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
|||++||||++++|++|+|||||++||+++...+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999976 99999999999999999999
Q ss_pred Hhh
Q 039402 1467 LLE 1469 (1496)
Q Consensus 1467 Ll~ 1469 (1496)
+++
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 874
No 227
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=367.81 Aligned_cols=223 Identities=25% Similarity=0.443 Sum_probs=190.0
Q ss_pred CcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCC--C
Q 039402 1242 SHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--I 1314 (1496)
Q Consensus 1242 ~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i 1314 (1496)
..-.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 21 ~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 98 (271)
T PRK14238 21 KKVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSY 98 (271)
T ss_pred CceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccc
Confidence 3346999999999964 359999999999999999999999999999999999987 699999999999854 3
Q ss_pred ChHHHhcccEEEcccccccccchhhccCC---CCCCc-----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 039402 1315 GLHDLRSRLSIIPQDPVMFEGTVRSNLDP---LEEST-----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1386 (1496)
Q Consensus 1315 ~l~~LR~~i~iIpQdp~LF~gTIR~NLdp---~~~~s-----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1386 (1496)
....+|++++|+||+|.+|.+|+++|+.. ..+.+ ++.+.++++..++.+.+. ......+.+||+|
T Consensus 99 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-------~~~~~~~~~LSgG 171 (271)
T PRK14238 99 SVEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELK-------DRLHDNAYGLSGG 171 (271)
T ss_pred cHHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHH-------HHHhcCcccCCHH
Confidence 55678899999999999999999999963 11222 223456676666543332 2234556789999
Q ss_pred HHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChh
Q 039402 1387 QRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1387 QrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~ 1465 (1496)
||||++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++
T Consensus 172 e~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~ 251 (271)
T PRK14238 172 QQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTD 251 (271)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778999999999999876 9999999999999999999
Q ss_pred hHhhcCCc
Q 039402 1466 NLLENKSS 1473 (1496)
Q Consensus 1466 ~Ll~~~~s 1473 (1496)
++.+++..
T Consensus 252 ~~~~~~~~ 259 (271)
T PRK14238 252 KIFSNPSD 259 (271)
T ss_pred HHHcCCCC
Confidence 99876543
No 228
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=364.01 Aligned_cols=218 Identities=24% Similarity=0.397 Sum_probs=189.3
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCCC--ChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1317 (1496)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999964 4599999999999999999999999999999999999875 799999999999753 345
Q ss_pred HHhcccEEEcccccccccchhhccCCCC---CC-c----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPLE---ES-T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++|+||+|.+|..|+++|+.... .. + ++++.++++.+++.+.+... .......||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDD-------LKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhH-------hhCCcccCCHHHHH
Confidence 6789999999999999999999996321 11 1 24567888888886544321 23345689999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|+||+|||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|++++++
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988777899999999999876 9999999999999999999998
Q ss_pred hcC
Q 039402 1469 ENK 1471 (1496)
Q Consensus 1469 ~~~ 1471 (1496)
.++
T Consensus 235 ~~~ 237 (251)
T PRK14270 235 LEP 237 (251)
T ss_pred cCC
Confidence 654
No 229
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=368.75 Aligned_cols=215 Identities=24% Similarity=0.418 Sum_probs=188.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 59999999999754446999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccccc--ccccchhhccCCC---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1325 IIPQDPV--MFEGTVRSNLDPL---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1325 iIpQdp~--LF~gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
++||+|. ++..|+++|+... ... .++++.++++..++.+.... ...+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADY-----------EPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHH
Confidence 9999994 4456899998532 111 23456778888887654432 34579999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+..||||++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998653 6899999999999988999999999999999999999764
No 230
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=367.06 Aligned_cols=222 Identities=24% Similarity=0.386 Sum_probs=193.1
Q ss_pred CCcceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCC---
Q 039402 1241 PSHGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDIS--- 1312 (1496)
Q Consensus 1241 p~~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~--- 1312 (1496)
|..+.|+++|++++|+. +++|+|+||+|++||++||+|++|||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 56788999999999964 3599999999999999999999999999999999999875 7999999998874
Q ss_pred -CCChHHHhcccEEEcccccccccchhhccCCCC--------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 039402 1313 -LIGLHDLRSRLSIIPQDPVMFEGTVRSNLDPLE--------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1383 (1496)
Q Consensus 1313 -~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~--------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1383 (1496)
....+.+|++++++||+|.+|.+|+++|+.... +..++++.++++.+++.+.+. ........+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCcccC
Confidence 234567889999999999999999999996321 123467788898888765332 2234456789
Q ss_pred CchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1384 SMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1384 S~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
|+|||||++||||++++|++++|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999987767899999999999975 9999999999999999
Q ss_pred ChhhHhhcC
Q 039402 1463 NPANLLENK 1471 (1496)
Q Consensus 1463 ~p~~Ll~~~ 1471 (1496)
+++++..++
T Consensus 243 ~~~~~~~~~ 251 (265)
T PRK14252 243 ATDTIFIKP 251 (265)
T ss_pred CHHHHHhCC
Confidence 999998654
No 231
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.2e-38 Score=357.20 Aligned_cols=211 Identities=21% Similarity=0.345 Sum_probs=187.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCCh----HHHhc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL----HDLRS 1321 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l----~~LR~ 1321 (1496)
+.+.|+.++|+++ .++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 1 ~~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 1 VQVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred CeeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 3578999999766 469999999999999999999999999999999999999999999999998876542 34577
Q ss_pred ccEEEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 039402 1322 RLSIIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS 1401 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~ 1401 (1496)
.++++||+|.+|+.|+++|+.....+++++..++++.+++.+.+...|.|+++.+.....+||+|||||++||||++++|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 89999999999999999999865445667788899999999989889999999998889999999999999999999999
Q ss_pred CEEEEEcCCCCCCHHHHHHHHH--HHHHhc-CCcEEEEEccCcchhcccCEEEEEeCCe
Q 039402 1402 KILMLDEATASVDTATDNLIQQ--TLRQHF-SDCTVLTIAHRITSVIDSDLVLLLNHGL 1457 (1496)
Q Consensus 1402 ~ILiLDEaTsslD~~Td~~Iq~--~I~~~f-~~~TVI~IAHRl~ti~~~DrIlVL~~G~ 1457 (1496)
+||||||||++||+.+.+.+.+ .++... .+.|+|+++|+.+.+..||+|++|++|+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999887776 444332 3689999999999999999999999984
No 232
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7.9e-39 Score=356.08 Aligned_cols=202 Identities=27% Similarity=0.396 Sum_probs=179.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|.. .++|+|+||++++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++... .++|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred Eccccccc-ccchhhccCCC---CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 039402 1326 IPQDPVMF-EGTVRSNLDPL---EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS 1401 (1496)
Q Consensus 1326 IpQdp~LF-~gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~ 1401 (1496)
+||++.+| ..|+++|+... ...+++++.++++..++.+...+. ...||+|||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 99999887 46999999632 123567788899999987665443 3568999999999999999999
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1402 KILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1402 ~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
++|+|||||++||+.+.+.+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999998764 47899999999999876 9999999999999865
No 233
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.2e-38 Score=368.06 Aligned_cols=223 Identities=22% Similarity=0.344 Sum_probs=190.3
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH---HHhc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLRS 1321 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~ 1321 (1496)
.|+++||+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5999999999963 3599999999999999999999999999999999999999999999999999876643 4578
Q ss_pred ccEEEccccccccc-chhhccCC----CCCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1322 RLSIIPQDPVMFEG-TVRSNLDP----LEEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~g-TIR~NLdp----~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
+++++||++.+|.+ |+++|+.. ....+ ++++.++++..++.+..... ..+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLM-----------PSELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999987 99999963 11122 23466678888775543332 3579999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998643 6899999999999876 99999999999999999999987
Q ss_pred cCCcHHHHHHH
Q 039402 1470 NKSSSFSQLVA 1480 (1496)
Q Consensus 1470 ~~~s~F~~l~~ 1480 (1496)
+++.....++.
T Consensus 234 ~~~~~~~~~~~ 244 (269)
T PRK11831 234 NPDPRVRQFLD 244 (269)
T ss_pred CCcHHHHHHHH
Confidence 65444455543
No 234
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-39 Score=372.92 Aligned_cols=203 Identities=33% Similarity=0.446 Sum_probs=176.5
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eE
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 684 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~ 684 (1496)
..++++|++.+|. +..+++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++|+ ++
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 4689999999996 578999999999999999999999999999999999999999999999995 49
Q ss_pred EEccCCccCC-CcHHHHhccCCCC----C-H---HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHH
Q 039402 685 YVAQSPWIQS-GKIEDNILFGKEM----N-R---ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 755 (1496)
Q Consensus 685 yv~Q~~~i~~-~ti~eNI~~g~~~----~-~---~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 755 (1496)
+|+|+.-+|. .||+|||.||... . + +++.++++..+|.+. -.+++.+|||||||||||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~-----------~~R~p~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGF-----------ADRKPHQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhh-----------hhhChhhhChHHHHHHHHHH
Confidence 9999999985 5999999999762 2 2 245555555555442 24678999999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCc-cccCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 756 ALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEF-LPAADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~-l~~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
||..+|+++|||||+||||.+.+.++-.++.+... .|.|.|+||||.++ +..+|||.+|++|+|.+.|+++|+....
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999988777655443 38999999999977 5669999999999999999999997654
No 235
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=368.50 Aligned_cols=213 Identities=27% Similarity=0.413 Sum_probs=186.3
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC-hHHHhcccE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG-LHDLRSRLS 1324 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~-l~~LR~~i~ 1324 (1496)
++++|++++|+++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999643 35999999999999999999999999999999999999999999999999998775 467889999
Q ss_pred EEccccc--ccccchhhccCCCC---CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1325 IIPQDPV--MFEGTVRSNLDPLE---EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1325 iIpQdp~--LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
++||+|. ++..|+++|+.... ..+ ++++.++++..++.+..... ...||+|||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRS-----------PKTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------cccCCHHHHHHHHHHH
Confidence 9999985 56789999996421 122 34567778888876554333 3579999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||+++|+||+|||||++||+.+...+.+.|++.. +++|||+++|+++.+..||+|++|++|++++.|+++++...
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999998764 47899999999999988999999999999999999998754
No 236
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-39 Score=357.18 Aligned_cols=202 Identities=31% Similarity=0.445 Sum_probs=178.6
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+. .++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 579999999964 35999999999999 99999999999999999999999999999999999998776 778999999
Q ss_pred Eccccccccc-chhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+..... ..+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKK-----------IGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCc-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999986 999998631 1111 34678889998886553322 256999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
+++|++|+|||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999988777999999999999975 9999999999999865
No 237
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=346.25 Aligned_cols=221 Identities=28% Similarity=0.381 Sum_probs=186.2
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.+++++|+..|.. ..||+||||+|++||.|+||||||||||||++++.|+..|++|+|.+||.++... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5899999999976 4699999999999999999999999999999999999999999999999887433 46799
Q ss_pred EEccccccccc-chhhccCC-CCC--C----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVMFEG-TVRSNLDP-LEE--S----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp-~~~--~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
||+|++.||+- ||++|+.. ... . ..+.+.+.|+++||.++-.+.|. .||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHH
Confidence 99999999998 99999963 221 1 23468889999999999888875 569999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeC--CeE---eEecChhhHh
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNH--GLI---EEFDNPANLL 1468 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~--G~I---vE~g~p~~Ll 1468 (1496)
|+.+|+||+||||.++||..|...+|+-+.+.- .++||++|||+++.... +|||+||.+ |+| ++.+-|..-
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~~~~~i~l~rpR- 223 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIGEELEIDLPRPR- 223 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcceeeEEecCCCCCc-
Confidence 999999999999999999999999999888755 35899999999988655 999999999 545 333333221
Q ss_pred hcCCcHHHHHHHHHhh
Q 039402 1469 ENKSSSFSQLVAEYTL 1484 (1496)
Q Consensus 1469 ~~~~s~F~~l~~~~~~ 1484 (1496)
...+..|..+.++-+.
T Consensus 224 ~~~~~~f~~l~~~i~~ 239 (248)
T COG1116 224 IRGDPEFLELREELLE 239 (248)
T ss_pred cccChHHHHHHHHHHH
Confidence 2345668777766554
No 238
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-38 Score=360.71 Aligned_cols=211 Identities=28% Similarity=0.428 Sum_probs=186.7
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+. .++++|+||+|++||++||+|++|||||||+++|+|+++|.+|+|++||.++...+. .++.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999987654 3678999
Q ss_pred Eccccccccc-chhhccCCC-------CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPL-------EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~-------~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|.+ |+++|+... ....++++.++++..++.+.....+ .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 999999621 1122456788888888877665544 47899999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcC
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~ 1471 (1496)
+++|++|||||||+++|..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 999999999999999999999999999998653 7899999999999876 9999999999999999999998654
No 239
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=8.4e-39 Score=325.69 Aligned_cols=211 Identities=30% Similarity=0.465 Sum_probs=187.1
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|.+++|.++|.. .|. ..+++|++||+|||+|+||||||||++++.|+..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~~---~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LPM---RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ceE---EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999964 343 57899999999999999999999999999999999999999999999877654 456999
Q ss_pred Eccccccccc-chhhccC----CCCC---CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLD----PLEE---STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLd----p~~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+.||.-||.- ||++|+. |.-. ...+.+..++.++|+.++...+|+ .||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999976 9999997 3222 234668999999999999999986 4699999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCc
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSS 1473 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s 1473 (1496)
+|+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +|+++++|+|||+..|+-++++..++.
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~~ 223 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKAS 223 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCCh
Confidence 99999999999999999999999888887765 46799999999999876 999999999999999999999976543
No 240
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=362.31 Aligned_cols=214 Identities=23% Similarity=0.335 Sum_probs=183.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCC------CCChHH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS------LIGLHD 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~------~i~l~~ 1318 (1496)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ......
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999964 35999999999999999999999999999999999999999999999999874 123456
Q ss_pred HhcccEEEccccccccc-chhhccCC--C--CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1319 LRSRLSIIPQDPVMFEG-TVRSNLDP--L--EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1319 LR~~i~iIpQdp~LF~g-TIR~NLdp--~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
+|++++++||+|.+|.+ |+++|+.. . ...+ .+++.++++..++.+.....+ .+||+||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFP-----------LHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHH
Confidence 78899999999999976 99999962 1 1111 234566777777765544433 578999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
|++||||++++|+||||||||++||+++...+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999864 37899999999999976 999999999999999999988
Q ss_pred hhcC
Q 039402 1468 LENK 1471 (1496)
Q Consensus 1468 l~~~ 1471 (1496)
.+.+
T Consensus 229 ~~~~ 232 (242)
T PRK11124 229 TQPQ 232 (242)
T ss_pred cCcc
Confidence 6543
No 241
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=369.31 Aligned_cols=215 Identities=24% Similarity=0.395 Sum_probs=189.5
Q ss_pred eEEEEeEEeEeCCC----CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC-hHHH
Q 039402 1245 KIDLLDLQVRYAPQ----MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG-LHDL 1319 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~----~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~-l~~L 1319 (1496)
-|+++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 58999999999743 246999999999999999999999999999999999999999999999999997654 4668
Q ss_pred hcccEEEccccc--ccccchhhccCCCC---CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1320 RSRLSIIPQDPV--MFEGTVRSNLDPLE---EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1320 R~~i~iIpQdp~--LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
|++++++||+|. +|..|+++|+.... ..+ ++++.++++.+++.+...+.| ..||+|||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 67679999996321 112 456788899999977665544 4789999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcccCEEEEEeCCeEeEecChhhHh
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVIDSDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
++|||||+++|++|||||||++||+.+...+.+.|++.- .++|||+|+|+++.+..||+|++|++|++++.|+|+++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999864 378999999999999889999999999999999999997
Q ss_pred hc
Q 039402 1469 EN 1470 (1496)
Q Consensus 1469 ~~ 1470 (1496)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 54
No 242
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=365.19 Aligned_cols=219 Identities=22% Similarity=0.435 Sum_probs=189.7
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1317 (1496)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5999999999964 359999999999999999999999999999999999986 479999999999853 4556
Q ss_pred HHhcccEEEcccccccccchhhccCCCC---CC---cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPLE---ES---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
.+|++++++||+|.+|..|+++|+.... .. .++++.++++.+++.+.+... ....+.+||+|||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDK-------LKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHH-------hcCCcccCCHHHHHHH
Confidence 7889999999999999899999996421 11 234566778888886655321 2345678999999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEe---------CCeEeEe
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLN---------HGLIEEF 1461 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~---------~G~IvE~ 1461 (1496)
+||||++++|+||||||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||||++|+ +|+|++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999988777899999999999876 99999998 8999999
Q ss_pred cChhhHhhcCC
Q 039402 1462 DNPANLLENKS 1472 (1496)
Q Consensus 1462 g~p~~Ll~~~~ 1472 (1496)
|+++++.+++.
T Consensus 241 ~~~~~~~~~~~ 251 (264)
T PRK14243 241 DRTEKIFNSPQ 251 (264)
T ss_pred CCHHHHHhCCC
Confidence 99999987654
No 243
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.4e-38 Score=357.42 Aligned_cols=203 Identities=27% Similarity=0.419 Sum_probs=175.4
Q ss_pred EEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH---Hh
Q 039402 1246 IDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LR 1320 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1320 (1496)
|+++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996432 35999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -cccEEEcccccccc-cchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1321 -SRLSIIPQDPVMFE-GTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1321 -~~i~iIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
++++++||+|.+|. .|+++|+... ...+ ++++.++++..++.+..... ...||+|||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHR-----------PSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHH
Confidence 67999999999986 5999999631 1121 23567778887776544332 357999999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcccCEEEEEeCCeEe
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVIDSDLVLLLNHGLIE 1459 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~Iv 1459 (1496)
+||||++++|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999764 368999999999999889999999999986
No 244
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.4e-38 Score=361.99 Aligned_cols=213 Identities=24% Similarity=0.390 Sum_probs=184.1
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC--hHHHhccc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG--LHDLRSRL 1323 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--l~~LR~~i 1323 (1496)
++++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999964 45999999999999999999999999999999999999999999999999998643 45678899
Q ss_pred EEEcccccccc-cchhhccCCCC----CC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDPVMFE-GTVRSNLDPLE----ES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp~LF~-gTIR~NLdp~~----~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
+++||++.+|. .|+++|+.... .. .++++.++++..++.+.... ....||+|||||++||
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la 148 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHH-----------YPSELSGGQQQRVAIA 148 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhc-----------ChhhcCHHHHHHHHHH
Confidence 99999999886 59999996321 11 12345667777776544433 3357999999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcC
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~ 1471 (1496)
||++++|++|+|||||++||+++...+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|++++.|++.++++++
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 149 RALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999999999998764 47899999999999965 9999999999999999999998654
No 245
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-39 Score=353.63 Aligned_cols=202 Identities=31% Similarity=0.419 Sum_probs=171.9
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.|.+++.+..|+ ..++++|||++|+.||.+|+.|||||||||||++|+|+..|++|+|.++|+
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 366777777775 467999999999999999999999999999999999999999999999996
Q ss_pred eEEEccCCccC-CCcHHHHhccCCCC---------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 KAYVAQSPWIQ-SGKIEDNILFGKEM---------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 ~~yv~Q~~~i~-~~ti~eNI~~g~~~---------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
+|||+|+.-+| ..||.|||.||.+. .+.+..+.++.|+|+..- ...+.+||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la-----------~ryP~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLA-----------DRYPAQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchh-----------hcCchhcChHHHHHHH
Confidence 59999999887 56999999999732 234555567777765432 3566899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
|||||..+|++|||||||+|||++..+.+-+.+.+-..+ |.|+++||||.++.- .||+|++|++|+|.+.|+++|+..
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 999999999999999999999999988885544433334 899999999998865 599999999999999999999975
Q ss_pred cC
Q 039402 831 SG 832 (1496)
Q Consensus 831 ~~ 832 (1496)
..
T Consensus 228 ~P 229 (345)
T COG1118 228 HP 229 (345)
T ss_pred CC
Confidence 43
No 246
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=367.24 Aligned_cols=212 Identities=27% Similarity=0.399 Sum_probs=188.3
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+..++|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccccccccc-chhhccCCCC-----------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPLE-----------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
++||++.++.+ |+++|+.... ...++++.++++.+++.+.....+ .+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHHH
Confidence 99999877665 9999996310 112456888999999866544433 368999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
||||++.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 99999999999999999999999999999999988642 7899999999999965 99999999999999999999874
No 247
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.4e-38 Score=365.03 Aligned_cols=225 Identities=28% Similarity=0.380 Sum_probs=188.1
Q ss_pred eEEEEeEEeEeCCC-------CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH
Q 039402 1245 KIDLLDLQVRYAPQ-------MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~-------~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1317 (1496)
.|+++||+++|++. ...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999642 34699999999999999999999999999999999999999999999999999887654
Q ss_pred H---HhcccEEEccccc--cc-ccchhhccCC----CCC----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 039402 1318 D---LRSRLSIIPQDPV--MF-EGTVRSNLDP----LEE----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1383 (1496)
Q Consensus 1318 ~---LR~~i~iIpQdp~--LF-~gTIR~NLdp----~~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1383 (1496)
+ +|++++++||+|. ++ ..|+++|+.. ... ..++++.++++..++.+.. ......+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED----------ADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh----------hhCChhhC
Confidence 3 6788999999983 44 3699999841 111 2234677788888774321 12344679
Q ss_pred CchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeE
Q 039402 1384 SMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1384 S~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE 1460 (1496)
|+|||||++||||++.+|+||||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999975 99999999999999
Q ss_pred ecChhhHhhcCCcHHHHHH
Q 039402 1461 FDNPANLLENKSSSFSQLV 1479 (1496)
Q Consensus 1461 ~g~p~~Ll~~~~s~F~~l~ 1479 (1496)
.|+++++++.++...+.+.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 232 ECDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred ECCHHHHcCCCCHHHHHHH
Confidence 9999999875433333343
No 248
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.2e-38 Score=362.76 Aligned_cols=215 Identities=27% Similarity=0.400 Sum_probs=184.7
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC--------h
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG--------L 1316 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--------l 1316 (1496)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcccEEEcccccccc-cchhhccCCC----CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1317 HDLRSRLSIIPQDPVMFE-GTVRSNLDPL----EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1317 ~~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
..+|++++++||+|.+|. .|+++|+... .... ++.+.++++..++.+.. .....+||+||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKE-----------TSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----------hCChhhCChHH
Confidence 467889999999999886 6999999631 1112 23456677777765432 23456899999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChh
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS-DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~ 1465 (1496)
|||++||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999988653 7899999999999976 9999999999999999999
Q ss_pred hHhhcCC
Q 039402 1466 NLLENKS 1472 (1496)
Q Consensus 1466 ~Ll~~~~ 1472 (1496)
++++.+.
T Consensus 230 ~~~~~~~ 236 (250)
T PRK11264 230 ALFADPQ 236 (250)
T ss_pred HHhcCCC
Confidence 9986543
No 249
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=362.55 Aligned_cols=224 Identities=24% Similarity=0.415 Sum_probs=191.7
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCCC--ChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1317 (1496)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5999999999963 3599999999999999999999999999999999999763 489999999999876 456
Q ss_pred HHhcccEEEcccccccccchhhccCCCC---C-----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPLE---E-----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
+.|++++++||+|.+|++|+++|+.... . ..++.+.++++.+++.+.+. ......+.+||+||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVK-------DRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhH-------HHhhcChhhCCHHHHH
Confidence 7888999999999999999999997321 1 11345677788887754433 2234556789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++.+|++++|||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999987777999999999999975 9999999999999999999998
Q ss_pred hcCCcHHHH
Q 039402 1469 ENKSSSFSQ 1477 (1496)
Q Consensus 1469 ~~~~s~F~~ 1477 (1496)
+++...+.+
T Consensus 237 ~~~~~~~~~ 245 (253)
T PRK14261 237 ENPHEELTE 245 (253)
T ss_pred hCCCcHHHH
Confidence 655433333
No 250
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=363.89 Aligned_cols=222 Identities=25% Similarity=0.413 Sum_probs=191.4
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----ccEEEECCeeCCC--CCh
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPA-----AGQILIDGIDISL--IGL 1316 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~--i~l 1316 (1496)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 47999999999964 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHHhcccEEEcccccccccchhhccCCC----CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1317 HDLRSRLSIIPQDPVMFEGTVRSNLDPL----EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1317 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
..+|+.++++||++.+|..|+++|+... +..+ ++++.++++.+++.+++..+ .......||+|||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHK-------IHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 6788999999999999999999999631 1112 34567788888887655432 2345678999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeC-----CeEeE
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNH-----GLIEE 1460 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~-----G~IvE 1460 (1496)
||++||||++++|++|||||||+++|+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999999743 47999999999999876 999999999 99999
Q ss_pred ecChhhHhhcCCcH
Q 039402 1461 FDNPANLLENKSSS 1474 (1496)
Q Consensus 1461 ~g~p~~Ll~~~~s~ 1474 (1496)
.|+|+++.+++...
T Consensus 237 ~~~~~~~~~~~~~~ 250 (261)
T PRK14258 237 FGLTKKIFNSPHDS 250 (261)
T ss_pred eCCHHHHHhCCCCH
Confidence 99999998766553
No 251
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-38 Score=362.64 Aligned_cols=220 Identities=22% Similarity=0.352 Sum_probs=192.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCCC--ChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1317 (1496)
.+.+++.+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... ...
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 3599999999999999999999999999999999999986 799999999998753 444
Q ss_pred HHhcccEEEcccccccccchhhccCCCC------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPLE------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
.+|++++++||+|.+|..|+++|+.... ...++++.++++.+++.+.+... ..+...+||+|||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDK-------LKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhh-------hhCCcccCCHHHHHHH
Confidence 6788999999999999999999997421 11235688899999987655432 2345678999999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEe--------CCeEeEec
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLN--------HGLIEEFD 1462 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~--------~G~IvE~g 1462 (1496)
+||||++++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.+ ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999988777899999999999876 99999996 89999999
Q ss_pred ChhhHhhcCCc
Q 039402 1463 NPANLLENKSS 1473 (1496)
Q Consensus 1463 ~p~~Ll~~~~s 1473 (1496)
+++++++++..
T Consensus 239 ~~~~~~~~~~~ 249 (261)
T PRK14263 239 PTAQIFQNPRE 249 (261)
T ss_pred CHHHHHhCCCc
Confidence 99999876543
No 252
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.2e-38 Score=360.73 Aligned_cols=211 Identities=27% Similarity=0.446 Sum_probs=181.6
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH-hcccE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RSRLS 1324 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i~ 1324 (1496)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988776654 57899
Q ss_pred EEccccccccc-chhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
++||+|.+|.+ |+++|+... .... ++++.+.++..++.+. ......+||+|||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~a 147 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHL-----------RKSKASSLSGGERRRVEIARA 147 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHHHHHHH
Confidence 99999999987 999999631 1112 2234556666665433 233446799999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
++++|++|+|||||++||+++.+.+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 148 LATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999999998765 47899999999987766 99999999999999999999874
No 253
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.2e-39 Score=356.36 Aligned_cols=200 Identities=31% Similarity=0.458 Sum_probs=174.2
Q ss_pred EEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEE
Q 039402 1247 DLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSII 1326 (1496)
Q Consensus 1247 ~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1326 (1496)
+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 47899999975334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred cccc--cccccchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1327 PQDP--VMFEGTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1327 pQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
||+| .++..|+++|+... ...+ ++++.++++..++.+...+. ...||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRS-----------PFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCC-----------cccCCHHHHHHHHHHHHH
Confidence 9998 36788999999642 1122 23566778888776544332 357999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCe
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGL 1457 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ 1457 (1496)
+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999998865 37899999999999987 99999999985
No 254
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.4e-38 Score=373.91 Aligned_cols=227 Identities=25% Similarity=0.373 Sum_probs=189.3
Q ss_pred eEEEEeEEeEeCC--CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCC---ccEEEECCeeCCCCChHHH
Q 039402 1245 KIDLLDLQVRYAP--QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPA---AGQILIDGIDISLIGLHDL 1319 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~--~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~---~G~I~IDG~dI~~i~l~~L 1319 (1496)
.++++|++++|+. +...+|+||||+|++||++||||+||||||||+++|+|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 6999999999963 2246999999999999999999999999999999999999996 9999999999999987765
Q ss_pred h----cccEEEcccc--cccc-cchhhccC----CCCCCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCC
Q 039402 1320 R----SRLSIIPQDP--VMFE-GTVRSNLD----PLEESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWS 1384 (1496)
Q Consensus 1320 R----~~i~iIpQdp--~LF~-gTIR~NLd----p~~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1384 (1496)
| ++|++||||| .++. -|+.+|+. .....+. +++.+.|+.+++.+ +. ..+......||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~-------~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPE-------AR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCC-------hH-HHhcCCcccCC
Confidence 4 4799999999 4554 37777662 2222222 34566777777642 11 11344567899
Q ss_pred chHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEe
Q 039402 1385 MGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1385 ~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~ 1461 (1496)
||||||++|||||+.+|++||+||||++||..+...|.+.|++.-+ +.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999987654 7899999999999975 999999999999999
Q ss_pred cChhhHhhcCCcHHHHHH
Q 039402 1462 DNPANLLENKSSSFSQLV 1479 (1496)
Q Consensus 1462 g~p~~Ll~~~~s~F~~l~ 1479 (1496)
|+++++++++...|.+..
T Consensus 244 g~~~~i~~~p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGL 261 (330)
T ss_pred CCHHHHHhCCCCHHHHHH
Confidence 999999988766665533
No 255
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=364.59 Aligned_cols=211 Identities=25% Similarity=0.439 Sum_probs=187.4
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++++.+++
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999988888888899999
Q ss_pred Eccccccccc-chhhccCCC--------CC---CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPL--------EE---STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCL 1393 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~--------~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~L 1393 (1496)
+||++.+|.+ |+++|++.. +. ..++++.++++.+++.+.... ....||+|||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADR-----------RLTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcC-----------CcccCCHHHHHHHHH
Confidence 9999998877 999999742 11 123457788888888654433 235789999999999
Q ss_pred HHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1394 GRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1394 ARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999998864 47899999999999875 99999999999999999999874
No 256
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.2e-38 Score=356.26 Aligned_cols=201 Identities=26% Similarity=0.380 Sum_probs=175.3
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCCh---HHHhcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL---HDLRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR~~ 1322 (1496)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 459999999999999999999999999999999999999999999999999987754 357889
Q ss_pred cEEEccccccccc-chhhccCCC---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1323 LSIIPQDPVMFEG-TVRSNLDPL---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1323 i~iIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
++++||+|.+|.+ |+++|+... ... .++++.++++.+++.+.....+ .+||+|||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHHH
Confidence 9999999999985 999999632 111 2346778888888866544333 47899999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeE
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLI 1458 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~I 1458 (1496)
||++++|+|++|||||++||+.+.+.+.+.|++.- +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999863 47999999999999986 899999999975
No 257
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-38 Score=358.09 Aligned_cols=203 Identities=27% Similarity=0.342 Sum_probs=176.7
Q ss_pred EEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1246 IDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEcccccccc-cchhhccCCC-C--C----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1324 SIIPQDPVMFE-GTVRSNLDPL-E--E----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1324 ~iIpQdp~LF~-gTIR~NLdp~-~--~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
+++||+|.+|. .|+++|+... . . ..++++.+++++.++.+...+.+ .+||+|||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999987 6999999631 1 1 12456788899988876555443 468999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEe--CCeEeEecCh
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLN--HGLIEEFDNP 1464 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~--~G~IvE~g~p 1464 (1496)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999864 37899999999998865 99999999 7999998764
No 258
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.7e-38 Score=342.67 Aligned_cols=172 Identities=32% Similarity=0.573 Sum_probs=162.7
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+....++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544469999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEE
Q 039402 1326 IPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILM 1405 (1496)
Q Consensus 1326 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILi 1405 (1496)
+||+|.+|++|+++|+ ||+|||||++||||++++|++|+
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 89999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcccCEEEEEeCCeE
Q 039402 1406 LDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVIDSDLVLLLNHGLI 1458 (1496)
Q Consensus 1406 LDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~~DrIlVL~~G~I 1458 (1496)
|||||++||+.+...+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998864 47899999999999988999999999975
No 259
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-38 Score=364.55 Aligned_cols=219 Identities=27% Similarity=0.422 Sum_probs=189.1
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCCCC-hHH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLIG-LHD 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i~-l~~ 1318 (1496)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 6899999999964 3599999999999999999999999999999999999986 6999999999998763 456
Q ss_pred HhcccEEEcccccccccchhhccCCC----CCCcHHHH----HHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1319 LRSRLSIIPQDPVMFEGTVRSNLDPL----EESTDEQI----WEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1319 LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~sd~eI----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
+|++++|+||+|.+|..|+++|+... ...+++++ .+.++.+++.+.+. +.......+||+|||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVK-------DRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhCCcccCCHHHHHH
Confidence 78999999999999999999999632 12344443 45567777654321 22345567899999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
++|||||+++|+||||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.+ ||||++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667999999999999876 99999999999999999999987
Q ss_pred cCC
Q 039402 1470 NKS 1472 (1496)
Q Consensus 1470 ~~~ 1472 (1496)
.+.
T Consensus 252 ~~~ 254 (276)
T PRK14271 252 SPK 254 (276)
T ss_pred CcC
Confidence 643
No 260
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.3e-38 Score=355.83 Aligned_cols=202 Identities=23% Similarity=0.414 Sum_probs=175.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ++++++
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999999766543 568999
Q ss_pred Ecccccccc-cchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFE-GTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||++.+|. .|+++|+... ...+ ++++.+++++.++.+.....+ ..||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999885 5999999642 1122 335667788888866544433 57899999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
+++|++|+|||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999999876 9999999999999986
No 261
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=363.23 Aligned_cols=219 Identities=26% Similarity=0.456 Sum_probs=187.2
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l~ 1317 (1496)
.++++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 48999999999643 599999999999999999999999999999999999974 69999999999864 4456
Q ss_pred HHhcccEEEcccccccc-cchhhccCC-C---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1318 DLRSRLSIIPQDPVMFE-GTVRSNLDP-L---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~-gTIR~NLdp-~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
.+|+.++++||++.+|. .|+++|+.. . +.. .++.+.++++.+++.+.+.. .......+||+|||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD-------RLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 78899999999999997 499999852 1 111 13456778888887544321 22344568999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEe------CCeEeEe
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLN------HGLIEEF 1461 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~------~G~IvE~ 1461 (1496)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999987667899999999999865 99999997 8999999
Q ss_pred cChhhHhhcCC
Q 039402 1462 DNPANLLENKS 1472 (1496)
Q Consensus 1462 g~p~~Ll~~~~ 1472 (1496)
|+|+++++++.
T Consensus 235 ~~~~~~~~~~~ 245 (258)
T PRK14241 235 DDTEKIFSNPT 245 (258)
T ss_pred CCHHHHHhCcC
Confidence 99999986543
No 262
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.9e-38 Score=344.51 Aligned_cols=193 Identities=30% Similarity=0.427 Sum_probs=158.4
Q ss_pred EEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 618 LDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
++++|+...|.... ..++|+++||+|++||+++|+|||||||||||++|.|...|++|+|.++|.
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 46788888886432 247899999999999999999999999999999999999999999999983
Q ss_pred ---eEEEccCCccC-CCcHHHHhccCC----CCC---HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 683 ---KAYVAQSPWIQ-SGKIEDNILFGK----EMN---RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 683 ---~~yv~Q~~~i~-~~ti~eNI~~g~----~~~---~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
+|||+|+..+. +.|++|||.+.. ... .++.+..++..++.+.. ...++.+|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~----------~~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRL----------LKKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhh----------ccCCchhcCHHHHHHH
Confidence 59999998875 569999999532 111 22333333433443222 1356789999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCccccCCEEEEEeCCeEE
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPAADLILVMKDGKIT 820 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~ 820 (1496)
||||||+.+|+++|.||||.+||.++++.+++.+..... .|+|+|+||||.+....|||++.|+||++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999865444433 489999999999999999999999999954
No 263
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=363.75 Aligned_cols=220 Identities=22% Similarity=0.403 Sum_probs=190.2
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCCC--CCh
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGL 1316 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l 1316 (1496)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ...
T Consensus 19 ~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 19 SVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred ceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 37999999999964 3599999999999999999999999999999999999863 59999999999864 344
Q ss_pred HHHhcccEEEcccccccccchhhccCCCC---C---CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1317 HDLRSRLSIIPQDPVMFEGTVRSNLDPLE---E---STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1317 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
..+|++++|+||++.+|.+|+++|+.... . ..++++.++++.+++.+.+... .......||+|||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDK-------LKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHH-------hcCCcccCCHHHHHH
Confidence 56789999999999999999999996421 1 1245567788888886554321 234457899999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEe---------CCeEeE
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLN---------HGLIEE 1460 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~---------~G~IvE 1460 (1496)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999988778999999999999975 99999997 899999
Q ss_pred ecChhhHhhcCC
Q 039402 1461 FDNPANLLENKS 1472 (1496)
Q Consensus 1461 ~g~p~~Ll~~~~ 1472 (1496)
.|+++++..++.
T Consensus 250 ~g~~~~~~~~~~ 261 (274)
T PRK14265 250 FSPTEQMFGSPQ 261 (274)
T ss_pred eCCHHHHHhCCC
Confidence 999999986644
No 264
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-38 Score=358.85 Aligned_cols=212 Identities=24% Similarity=0.363 Sum_probs=180.3
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH-Hhccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1323 (1496)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .|+++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998887655 67889
Q ss_pred EEEccccccccc-chhhccCCCCC-CcH----HHHHHHHHHc-CCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLEE-STD----EQIWEALDKC-QLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~~-~sd----~eI~~aL~~~-~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
+++||++.+|.+ |+++|+..... .+. +++.++++.. ++.+ ........||+|||||++||||
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~a 151 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-----------RRIQRAGTMSGGEQQMLAIGRA 151 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-----------HHhCchhhCCHHHHHHHHHHHH
Confidence 999999999986 99999964211 122 2233334433 1211 1223456799999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
++++|+||+|||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 152 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 152 LMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 999999999999999999999999999998764 47999999999998765 99999999999999999999975
No 265
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-38 Score=358.54 Aligned_cols=210 Identities=26% Similarity=0.428 Sum_probs=185.5
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|.. + +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999964 3 7999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred Ecccccccc-cchhhccCC---CCCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFE-GTVRSNLDP---LEES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~-gTIR~NLdp---~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||++.+|. .|+++|+.. .... .++++.++++.+++.+.+.+.+ .+||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999995 699999962 1111 2346788899999877655443 46899999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcC
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~ 1471 (1496)
+++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999998643 7999999999999886 9999999999999999999998754
No 266
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-38 Score=367.60 Aligned_cols=215 Identities=26% Similarity=0.391 Sum_probs=183.6
Q ss_pred EEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCC----ChHH
Q 039402 1246 IDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLHD 1318 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~~ 1318 (1496)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 3599999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcccEEEcccc--cccccchhhccCCC---CCCcHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1319 LRSRLSIIPQDP--VMFEGTVRSNLDPL---EESTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1319 LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
+|++|+|+||+| .+|++|+++|+... ...+++ .+.++++..++.+.. ......+||+||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESL----------FEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcccCCHHHHH
Confidence 889999999998 68889999999631 112332 245566777765311 12334679999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
|++||||++++|++|||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998864 37899999999999865 999999999999999999998
Q ss_pred hhc
Q 039402 1468 LEN 1470 (1496)
Q Consensus 1468 l~~ 1470 (1496)
+++
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 764
No 267
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.3e-38 Score=355.97 Aligned_cols=200 Identities=25% Similarity=0.375 Sum_probs=176.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH---HHhcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~~ 1322 (1496)
|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999533 4699999999999999999999999999999999999999999999999999887643 46889
Q ss_pred cEEEcccccccc-cchhhccCCC----C---CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1323 LSIIPQDPVMFE-GTVRSNLDPL----E---ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1323 i~iIpQdp~LF~-gTIR~NLdp~----~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
++++||+|.+|. .|+++|+... + +..+++++++++..++.+.....| .+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999986 5999998632 1 112457888999999876554443 47899999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCe
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGL 1457 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ 1457 (1496)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47999999999999987 99999999985
No 268
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=360.12 Aligned_cols=219 Identities=25% Similarity=0.430 Sum_probs=189.3
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCeeCC-CCChHH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDIS-LIGLHD 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~-~i~l~~ 1318 (1496)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999964 4599999999999999999999999999999999999986 5999999999986 455677
Q ss_pred HhcccEEEcccccccccchhhccCCC---CCC-c----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1319 LRSRLSIIPQDPVMFEGTVRSNLDPL---EES-T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1319 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
+|+.++|+||+|.+|.+|+++|+... ... . ++++.++++.+++.+.+. .........||+|||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHHH
Confidence 89999999999999999999999632 111 1 234567788888765442 12234456899999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
++||||++++|+||||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999988777999999999999887 99999999999999999999876
Q ss_pred cCC
Q 039402 1470 NKS 1472 (1496)
Q Consensus 1470 ~~~ 1472 (1496)
++.
T Consensus 234 ~~~ 236 (249)
T PRK14253 234 NPK 236 (249)
T ss_pred CCC
Confidence 543
No 269
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=379.47 Aligned_cols=204 Identities=29% Similarity=0.437 Sum_probs=179.7
Q ss_pred ccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH----hcccEEEccccccccc-
Q 039402 1261 LVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL----RSRLSIIPQDPVMFEG- 1335 (1496)
Q Consensus 1261 ~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L----R~~i~iIpQdp~LF~g- 1335 (1496)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+...+..++ |++++|+||++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876654 3589999999999975
Q ss_pred chhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEc
Q 039402 1336 TVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDE 1408 (1496)
Q Consensus 1336 TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDE 1408 (1496)
|+++|+... ...+ ++++.++++.+++.+...+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 999999631 1112 356778899999987665554 4789999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHH
Q 039402 1409 ATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSF 1475 (1496)
Q Consensus 1409 aTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F 1475 (1496)
||++||+.+.+.+++.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+|+++++++...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999998864 47899999999999865 99999999999999999999987665433
No 270
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-38 Score=366.84 Aligned_cols=215 Identities=29% Similarity=0.433 Sum_probs=184.0
Q ss_pred eEEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCC----ChH
Q 039402 1245 KIDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~ 1317 (1496)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999997432 3599999999999999999999999999999999999999999999999998754 245
Q ss_pred HHhcccEEEcccc--cccccchhhccCCC---CCCc----HHHHHHHHHHcCCc-HHHHhccCCcccccccCCCCCCchH
Q 039402 1318 DLRSRLSIIPQDP--VMFEGTVRSNLDPL---EEST----DEQIWEALDKCQLG-DEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
..|++++++||+| .+|..|+++|+... ...+ ++.+.++++.+++. +... ....+||+||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLIS-----------KSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhh-----------CCcccCCHHH
Confidence 6788999999998 58888999999521 1222 23456778888775 3322 2345799999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChh
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~ 1465 (1496)
|||++|||||+++|++|||||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999864 46899999999999865 9999999999999999999
Q ss_pred hHhhc
Q 039402 1466 NLLEN 1470 (1496)
Q Consensus 1466 ~Ll~~ 1470 (1496)
+++++
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 98753
No 271
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=369.17 Aligned_cols=218 Identities=24% Similarity=0.365 Sum_probs=183.4
Q ss_pred cceEEEEeEEeEeCCCC---CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCC----C-
Q 039402 1243 HGKIDLLDLQVRYAPQM---PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL----I- 1314 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~---~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~----i- 1314 (1496)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 47899999999996532 259999999999999999999999999999999999999999999999999853 2
Q ss_pred ChHHHhcccEEEcccc--cccccchhhccCCCC---CCcHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 039402 1315 GLHDLRSRLSIIPQDP--VMFEGTVRSNLDPLE---ESTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1385 (1496)
Q Consensus 1315 ~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1385 (1496)
+...+|++++++||+| .+|.+|+++|+.... ..+.+ .+.+.++..++.+. .......+||+
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~----------~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPED----------YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhcCChhhCCH
Confidence 3567888999999998 478889999996321 12222 34455666655211 12234567999
Q ss_pred hHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1386 GQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1386 GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999988653 7899999999998865 9999999999999999
Q ss_pred ChhhHhhc
Q 039402 1463 NPANLLEN 1470 (1496)
Q Consensus 1463 ~p~~Ll~~ 1470 (1496)
++++++++
T Consensus 234 ~~~~~~~~ 241 (289)
T PRK13645 234 SPFEIFSN 241 (289)
T ss_pred CHHHHhcC
Confidence 99998753
No 272
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.8e-38 Score=357.23 Aligned_cols=211 Identities=27% Similarity=0.427 Sum_probs=179.4
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH-HhcccE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRSRLS 1324 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i~ 1324 (1496)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999974 35999999999999999999999999999999999999999999999999998887654 467899
Q ss_pred EEccccccccc-chhhccCCC-CC--CcHHH-HHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPL-EE--STDEQ-IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~-~~--~sd~e-I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
++||++.+|.+ |+++|+... .. ..+++ ..++++..+ +++........+||+|||||++||||+++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999987 999999631 11 12222 233343332 22223344556899999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999998653 6899999999999986 9999999999999999999983
No 273
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-38 Score=364.31 Aligned_cols=213 Identities=23% Similarity=0.362 Sum_probs=188.9
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
-.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999974 3599999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEcccccccc-cchhhccCCC--C---------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1324 SIIPQDPVMFE-GTVRSNLDPL--E---------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1324 ~iIpQdp~LF~-gTIR~NLdp~--~---------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
+|+||++.+|. .|+++|+... . +..++++.++++..++.+...+ ...+||+|||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQ-----------SVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCChHHHHHH
Confidence 99999998875 5999999642 1 1123467888988888654332 3467999999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
+||||++++|++|+|||||++||+.+...+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999988643 7899999999998876 9999999999999999999987
Q ss_pred h
Q 039402 1469 E 1469 (1496)
Q Consensus 1469 ~ 1469 (1496)
+
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 274
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-38 Score=368.67 Aligned_cols=220 Identities=28% Similarity=0.501 Sum_probs=190.8
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCCC--C
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISLI--G 1315 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i--~ 1315 (1496)
...|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 447999999999965 359999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHHHhcccEEEcccccccccchhhccCCC-C-------------------CCcHHHHHHHHHHcCCcHHHHhccCCcccc
Q 039402 1316 LHDLRSRLSIIPQDPVMFEGTVRSNLDPL-E-------------------ESTDEQIWEALDKCQLGDEVRKKEGKLDSK 1375 (1496)
Q Consensus 1316 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~-------------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~ 1375 (1496)
...+|++++|+||++.+|.+|+++|+... . +..++++.++++.+++.+.+. ..
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN-------DR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh-------HH
Confidence 66788999999999999999999999631 0 012455788888888754432 23
Q ss_pred cccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEE-EEE
Q 039402 1376 VTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLV-LLL 1453 (1496)
Q Consensus 1376 v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrI-lVL 1453 (1496)
......+||+|||||++|||||+++|+||||||||++||+.+...+.+.|++..++.|||+|+|+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 34556789999999999999999999999999999999999999999999988777899999999999876 9997 578
Q ss_pred eCCeEeEecChhhHhhcC
Q 039402 1454 NHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1454 ~~G~IvE~g~p~~Ll~~~ 1471 (1496)
++|++++.|+++++++.+
T Consensus 274 ~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 274 TGGELVEYDDTDKIFENP 291 (305)
T ss_pred cCCEEEEeCCHHHHHhCc
Confidence 999999999999998654
No 275
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=7.1e-38 Score=355.81 Aligned_cols=214 Identities=32% Similarity=0.507 Sum_probs=187.8
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC-------------eeE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TKA 684 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g-------------~~~ 684 (1496)
++++|+++.|+..+++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 3678999999643335799999999999999999999999999999999999999999999988 269
Q ss_pred EEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 039402 685 YVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDI 763 (1496)
Q Consensus 685 yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1496)
|++|++++++.|++||+.++.. ...++..+.++.+++.+.++.+|.|.++..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999988999999998753 334455566777788888888988888888999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 764 YLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
+||||||++||+.+...+.+. +....+++|+|++||+++.+..||++++|++|++++.|+.+++....
T Consensus 161 lllDEP~~gLD~~~~~~l~~~-l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEA-LDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred EEEeCccccCCHHHHHHHHHH-HHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 999999999999998888654 44444789999999999998889999999999999999988876543
No 276
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-38 Score=377.26 Aligned_cols=218 Identities=26% Similarity=0.437 Sum_probs=190.7
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
..|+++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++..++. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 36999999999964 359999999999999999999999999999999999999999999999999987664 46789
Q ss_pred EEEccccccccc-chhhccCC-CC--CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDP-LE--EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp-~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
++++|++.+|.. |+++|+.. .. ..+ ++++.++++..++.+.....| .+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 99999973 21 222 345678888888876655544 468999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCC
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKS 1472 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~ 1472 (1496)
||+++|++|+||||||+||..+.+.+.+.|++.. .+.|+|+|||+++.+.. ||+|+||++|++++.|+|+++.+++.
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~ 242 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPT 242 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCc
Confidence 9999999999999999999999999988887654 36899999999998765 99999999999999999999998877
Q ss_pred cHHH
Q 039402 1473 SSFS 1476 (1496)
Q Consensus 1473 s~F~ 1476 (1496)
..|-
T Consensus 243 ~~~~ 246 (377)
T PRK11607 243 TRYS 246 (377)
T ss_pred cHHH
Confidence 6553
No 277
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=360.75 Aligned_cols=222 Identities=27% Similarity=0.411 Sum_probs=189.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE--P---AAGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~--i~l~ 1317 (1496)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999974 459999999999999999999999999999999999975 4 59999999999864 3455
Q ss_pred HHhcccEEEcccccccccchhhccCCC---CC--C---cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1318 DLRSRLSIIPQDPVMFEGTVRSNLDPL---EE--S---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~--~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
.+|++++++||+|.+|.+|+++|+... .. . .++++.++++.+++.+.+. ........+||+||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHHH
Confidence 678899999999999999999999621 11 1 1345677788887754332 1233445789999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|+||||||||++||..+.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|++.+..
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988667899999999999976 9999999999999999999998
Q ss_pred hcCCcHH
Q 039402 1469 ENKSSSF 1475 (1496)
Q Consensus 1469 ~~~~s~F 1475 (1496)
.++...+
T Consensus 236 ~~~~~~~ 242 (252)
T PRK14255 236 LNPKEKE 242 (252)
T ss_pred cCCCChH
Confidence 7655443
No 278
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-38 Score=351.66 Aligned_cols=200 Identities=29% Similarity=0.417 Sum_probs=175.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|++. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999986653 4678999
Q ss_pred Eccccccccc-chhhccCCC-C---C---CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPL-E---E---STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~-~---~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|.+ |+++|+... . . .+++++.++++.+++.+.....| .+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 999999732 1 1 23557889999999876655544 36899999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
+++|++|||||||++||+++...+.+.|++.. .++|+|+|+|+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999865 37899999999999976 9999999999998864
No 279
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-38 Score=365.55 Aligned_cols=224 Identities=24% Similarity=0.388 Sum_probs=189.9
Q ss_pred cceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCeeCCCC--C
Q 039402 1243 HGKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISLI--G 1315 (1496)
Q Consensus 1243 ~g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i--~ 1315 (1496)
...|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... .
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346999999999964 359999999999999999999999999999999999865 4999999999998653 3
Q ss_pred hHHHhcccEEEcccccccccchhhccCCC---CCC-c----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1316 LHDLRSRLSIIPQDPVMFEGTVRSNLDPL---EES-T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1316 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
...+|++++|+||+|.+|.+|+++|+... ... + ++++.++++..++.+.+.. .+ ......|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~----~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSD---RL----DKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhh---Hh----hCChhhCCHHH
Confidence 34678999999999999999999999631 111 1 2456678888877543321 12 33456899999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhh
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
|||++|||||+++|++|||||||++||+++...+.+.|++..+++|||+++|+++.+.+ ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999876 99999999999999999999
Q ss_pred HhhcCCcHH
Q 039402 1467 LLENKSSSF 1475 (1496)
Q Consensus 1467 Ll~~~~s~F 1475 (1496)
+.+++...+
T Consensus 268 ~~~~~~~~~ 276 (286)
T PRK14275 268 LFTNPKDRM 276 (286)
T ss_pred HHhCCCcHH
Confidence 987654433
No 280
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.5e-38 Score=370.18 Aligned_cols=212 Identities=26% Similarity=0.372 Sum_probs=182.9
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 3599999999999999999999999999999999999999999999999998754 356789999
Q ss_pred EEcccccccc-cchhhccCCC---CCCcHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVMFE-GTVRSNLDPL---EESTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~LF~-gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
++||+|.+|. .|+++|+..+ ...++. ++.++++.+++.+. ++.. ...||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-------~~~~----~~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADVR----VALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-------hcCc----hhhCCHHHHHHHHHHHH
Confidence 9999999885 5999999621 122322 34556777766543 2333 34699999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|+++|++|+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.+.
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47899999999999976 999999999999999999999754
No 281
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.3e-38 Score=363.18 Aligned_cols=229 Identities=25% Similarity=0.347 Sum_probs=190.7
Q ss_pred eEEEEeEEeEeCC-------CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH
Q 039402 1245 KIDLLDLQVRYAP-------QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~-------~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1317 (1496)
.|+++||+++|.. ...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++....+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 4899999999952 123699999999999999999999999999999999999999999999999999765666
Q ss_pred HHhcccEEEccccc--cccc-chhhccCC----C----CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 039402 1318 DLRSRLSIIPQDPV--MFEG-TVRSNLDP----L----EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1386 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~--LF~g-TIR~NLdp----~----~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1386 (1496)
..|++++++||+|. ++.. |+.+|+.. . ....++++.++++.+++.+... +. ...+||+|
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~~----~~~~LS~G 153 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA------SY----YPHMLAPG 153 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH------hc----CchhcCHH
Confidence 66778999999985 4444 78888741 1 1112356788999999843221 11 23579999
Q ss_pred HHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecC
Q 039402 1387 QRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDN 1463 (1496)
Q Consensus 1387 QrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~ 1463 (1496)
||||++||||++++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+
T Consensus 154 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 233 (267)
T PRK15112 154 QKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGS 233 (267)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCC
Confidence 99999999999999999999999999999999999999998643 7899999999999987 99999999999999999
Q ss_pred hhhHhhcCC-cHHHHHHHHHh
Q 039402 1464 PANLLENKS-SSFSQLVAEYT 1483 (1496)
Q Consensus 1464 p~~Ll~~~~-s~F~~l~~~~~ 1483 (1496)
++++.+++. ..+++++.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~ 254 (267)
T PRK15112 234 TADVLASPLHELTKRLIAGHF 254 (267)
T ss_pred HHHHhcCCCCHHHHHHHHhcc
Confidence 999987643 34556665543
No 282
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.4e-38 Score=322.35 Aligned_cols=197 Identities=31% Similarity=0.447 Sum_probs=169.9
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~yv 686 (1496)
+.++++.|+|.. .=-..+++|++||++||+||+||||||||++|+|+..|.+|+|.++|. ++++
T Consensus 2 l~L~~V~~~y~~-----~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGH-----LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCc-----ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 456778888852 223578899999999999999999999999999999999999999995 4799
Q ss_pred ccCCccCCC-cHHHHhccCCC-------CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHc
Q 039402 687 AQSPWIQSG-KIEDNILFGKE-------MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 758 (1496)
Q Consensus 687 ~Q~~~i~~~-ti~eNI~~g~~-------~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1496)
+|+..+|.- ||++||-+|.. .++++.+.++...++....+.+| .+|||||||||+|||++.
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARclv 145 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARCLV 145 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHHHh
Confidence 999999965 99999999953 24567777888888887777666 689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHH--hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 759 QDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL--LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~--~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
++.+|+|||||||||||.-+..+.. ++..+ .++.|+++|||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 146 R~~PilLLDEPFsALdP~LR~eMl~-Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 146 REQPILLLDEPFSALDPALRAEMLA-LVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred ccCCeEEecCchhhcCHHHHHHHHH-HHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 9999999999999999998887754 34333 358899999999999876 999999999999999999988754
No 283
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-38 Score=359.65 Aligned_cols=223 Identities=24% Similarity=0.400 Sum_probs=187.3
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----ccEEEECCeeCCC--CChH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPA-----AGQILIDGIDISL--IGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~--i~l~ 1317 (1496)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.+++. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4889999999964 35999999999999999999999999999999999999874 8999999999975 3455
Q ss_pred HHhcccEEEccccccccc-chhhccCC-C--CC-CcHHH----HHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1318 DLRSRLSIIPQDPVMFEG-TVRSNLDP-L--EE-STDEQ----IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~LF~g-TIR~NLdp-~--~~-~sd~e----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
.+|++++|+||+|.+|.+ |+++|+.. . .. ..+++ ..+.++..++.+.+. +.++. ...+||+|||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~----~~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVK---DRLKT----PATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhh---hhhcC----CcccCCHHHH
Confidence 788999999999999985 99999962 1 11 12333 333455566544322 22333 3568999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
||++||||++++|+||||||||++||..+...+.+.|++..+++|+|+++|+++.+.+ ||+|++|++|++++.|+|+++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999986 999999999999999999999
Q ss_pred hhcCCcHHH
Q 039402 1468 LENKSSSFS 1476 (1496)
Q Consensus 1468 l~~~~s~F~ 1476 (1496)
++++...+.
T Consensus 235 ~~~~~~~~~ 243 (252)
T PRK14272 235 FTNPRDERT 243 (252)
T ss_pred HhCcCcHHH
Confidence 877655443
No 284
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-38 Score=357.88 Aligned_cols=213 Identities=26% Similarity=0.429 Sum_probs=182.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH-Hhccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1323 (1496)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998877654 57889
Q ss_pred EEEccccccccc-chhhccCCCC----CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLE----EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
+++||+|.+|.+ |+++|+.... ..+ ++.+.+.++..++.+. .......||+|||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHL-----------RDSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHH-----------hhcchhhCCHHHHHHHHHH
Confidence 999999999885 9999997431 112 2235555666555432 3334567999999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||++++|++|+|||||++||+.+...+.+.+++.- .++|+|+++|+++.+.+ ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999999998754 47899999999987765 999999999999999999999753
No 285
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.3e-38 Score=354.50 Aligned_cols=206 Identities=22% Similarity=0.323 Sum_probs=179.9
Q ss_pred eEEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH---H
Q 039402 1245 KIDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---L 1319 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---L 1319 (1496)
.|+++|++++|+++. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 599999999997532 25999999999999999999999999999999999999999999999999998887654 3
Q ss_pred -hcccEEEccccccccc-chhhccCC---CCCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1320 -RSRLSIIPQDPVMFEG-TVRSNLDP---LEES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1320 -R~~i~iIpQdp~LF~g-TIR~NLdp---~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
+++++++||+|.+|.+ |+++|+.. +... ..+++.++++.+++.+.....| ..||+|||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3679999999999885 99999863 1111 2356788899998876655443 4689999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEeCCeEeEe
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~IvE~ 1461 (1496)
++|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999988643 6899999999999988999999999999874
No 286
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-38 Score=360.02 Aligned_cols=212 Identities=27% Similarity=0.391 Sum_probs=186.8
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999964 35999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEcccccc-cccchhhccCCCC--C-----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVM-FEGTVRSNLDPLE--E-----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~L-F~gTIR~NLdp~~--~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
++||++.+ +..|+++|+.... . ..++++.++++..++.+...+. ...||+|||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRD-----------YPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCC-----------cccCCHHHHHHHHHHHH
Confidence 99999987 6779999986321 1 1234577888888886543332 35799999999999999
Q ss_pred Hc------cCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1397 LL------KRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1397 LL------r~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
|+ ++|++|+|||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999864 47899999999999875 999999999999999999998
Q ss_pred hh
Q 039402 1468 LE 1469 (1496)
Q Consensus 1468 l~ 1469 (1496)
.+
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 75
No 287
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-38 Score=358.97 Aligned_cols=203 Identities=28% Similarity=0.400 Sum_probs=179.3
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++
T Consensus 12 ~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 5999999999964 35999999999999999999999999999999999999999999999998763 5688999
Q ss_pred EEcccccccc-cchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 039402 1325 IIPQDPVMFE-GTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSK 1402 (1496)
Q Consensus 1325 iIpQdp~LF~-gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ 1402 (1496)
++||+|.+|. .|+++|+... ....++++.++++..++.+...+ ...+||||||||++|||||+++|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANE-----------WPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999987 5999999742 22235678888999988665433 235799999999999999999999
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChh
Q 039402 1403 ILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPA 1465 (1496)
Q Consensus 1403 ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~ 1465 (1496)
+|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999998864 37899999999999865 9999999999999988754
No 288
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=5.7e-38 Score=356.03 Aligned_cols=210 Identities=24% Similarity=0.424 Sum_probs=184.5
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+. +++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999986653 4788999
Q ss_pred Eccccccccc-chhhccCCCC---CC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPLE---ES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~~---~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|.+ |+++|+.... .. .++++.+++++.++.+...+. ..+||+||+||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 11 235677888888886554433 257999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
+++|++++|||||++||.++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|+++|.|+++++++.
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999998654 6899999999999876 999999999999999999999854
No 289
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-38 Score=366.21 Aligned_cols=217 Identities=25% Similarity=0.418 Sum_probs=194.8
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhccc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRL 1323 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1323 (1496)
..|+++||+.+|. ...+++|+|++|++||.+.++|||||||||++++|.||..|++|+|.|||.||..++.+ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999998 34699999999999999999999999999999999999999999999999999998876 4779
Q ss_pred EEEccccccccc-chhhccCC-CC---CCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDP-LE---ESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp-~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
++|+|+.-||+- ||++|+.. +. ...+ +.+.++|+.++|.++-...|. .|||||+||++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 999999999977 99999863 22 1232 367899999999998777764 5699999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhc-ccCEEEEEeCCeEeEecChhhHhhcC
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVI-DSDLVLLLNHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~-~~DrIlVL~~G~IvE~g~p~~Ll~~~ 1471 (1496)
|||..+|++|+||||-|+||..-...+|.-+++.. .+.|.|.|||+-+... -+|||.||++|+|...|+|+|+..++
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999998888754 3789999999987765 59999999999999999999999998
Q ss_pred CcHH
Q 039402 1472 SSSF 1475 (1496)
Q Consensus 1472 ~s~F 1475 (1496)
.+.|
T Consensus 229 ~~~f 232 (352)
T COG3842 229 ATRF 232 (352)
T ss_pred chHH
Confidence 8776
No 290
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-38 Score=363.56 Aligned_cols=213 Identities=26% Similarity=0.400 Sum_probs=184.6
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCC--CChHHHhccc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL--IGLHDLRSRL 1323 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~--i~l~~LR~~i 1323 (1496)
|+++||+++|+.. +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.+++. .+...+|++|
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 7899999999633 359999999999999999999999999999999999999999999999999853 2345688999
Q ss_pred EEEcccc--cccccchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDP--VMFEGTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
+|+||+| .+|..|+++|+... ...+ .+++.++++.+++.+..... ...||+|||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKP-----------PHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999998 57889999999521 1122 24577888888886543322 357999999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
||++++|++|||||||++||+.+...+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999865 37899999999999875 999999999999999999999863
No 291
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-37 Score=352.25 Aligned_cols=214 Identities=33% Similarity=0.519 Sum_probs=189.3
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~ 684 (1496)
++++|++++|+.. .+++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4688999999632 247999999999999999999999999999999999999999999999873 68
Q ss_pred EEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 039402 685 YVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDI 763 (1496)
Q Consensus 685 yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1496)
|++|++++++.|++||+.++.. ...+.+.+.++.+.+.+.++.++.|..+..++++.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998753 345556667777788888899988888889999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCc
Q 039402 764 YLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGT 833 (1496)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~ 833 (1496)
+||||||++||+.+...+.+ ++....+++|+|++||+++.+..||++++|++|++++.|+.+++.....
T Consensus 160 llLDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 228 (234)
T cd03251 160 LILDEATSALDTESERLVQA-ALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGG 228 (234)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCc
Confidence 99999999999999888864 5555556899999999999988899999999999999999988865543
No 292
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.7e-38 Score=372.16 Aligned_cols=212 Identities=28% Similarity=0.429 Sum_probs=184.2
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++||+++|+. ..+|+||||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+.... ...|++|+
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999997654 56889999
Q ss_pred EEccccccc-ccchhhccCCCC---CCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVMF-EGTVRSNLDPLE---ESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~LF-~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
|+||++.+| ..|+++|+..+. ..+. +.+.++++.+++.+. .+..+ .+||+|||||++||||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-------~~~~~----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADARV----SDLSGGMKRRLTLARA 186 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-------hCCCh----hhCCHHHHHHHHHHHH
Confidence 999999987 459999996321 1222 234566777776543 33333 4799999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|+++|++|||||||++||+.+...+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47999999999999976 999999999999999999999764
No 293
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2e-37 Score=355.69 Aligned_cols=216 Identities=28% Similarity=0.416 Sum_probs=193.0
Q ss_pred CccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 615 ETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
...++++|++++|+.. .+++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 17 ~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 17 GGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 3569999999999632 357999999999999999999999999999999999999999999999873
Q ss_pred -eEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCC
Q 039402 683 -KAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDS 761 (1496)
Q Consensus 683 -~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 761 (1496)
++|++|+|+++++|++||+........+++..+++..++.+.++.+|.|.++.+++.+.+||||||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 6999999999999999999876544556667778888898889999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 762 DIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 762 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
+++||||||++||+++...+++ ++....+++|+|++||+++.+..||+|++|++|++++.|+++++.+..
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 245 (257)
T cd03288 176 SILIMDEATASIDMATENILQK-VVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQE 245 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHH-HHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhcc
Confidence 9999999999999999877754 455555689999999999998889999999999999999999887543
No 294
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-37 Score=351.62 Aligned_cols=211 Identities=32% Similarity=0.510 Sum_probs=188.8
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|++++|+. .+++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 4789999999952 346999999999999999999999999999999999999999999999872 6
Q ss_pred EEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCC
Q 039402 684 AYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSD 762 (1496)
Q Consensus 684 ~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1496)
+|++|+++++..|++||+.++.+ ...++..+.++.+++.+.++.+|.|.++..+....+|||||||||+||||++++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999998754 34456667778888888889999899998999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHh
Q 039402 763 IYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
++||||||++||+.+.+.+.+ ++....+++|+|++||+++.++.||++++|++|++++.|+.+++..
T Consensus 160 llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQE-ALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999999999999888865 4555556899999999999988899999999999999999887754
No 295
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=352.42 Aligned_cols=214 Identities=31% Similarity=0.523 Sum_probs=188.8
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~ 684 (1496)
++++|+++.|+. ++++++|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 367899999852 356999999999999999999999999999999999999999999999883 68
Q ss_pred EEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 039402 685 YVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDI 763 (1496)
Q Consensus 685 yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1496)
|++|++++++.|++||+.++.. ...+...+.++.+++.+.++.+|.|.++.+++++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998753 344445666777888888899999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhcCcc
Q 039402 764 YLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINSGTD 834 (1496)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~~~~ 834 (1496)
+||||||++||+++...+.+ ++....+++|+|++||+.+.+..||++++|++|++++.|+.+++......
T Consensus 159 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~ 228 (236)
T cd03253 159 LLLDEATSALDTHTEREIQA-ALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGL 228 (236)
T ss_pred EEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccH
Confidence 99999999999999888865 44444458999999999999878999999999999999998887664433
No 296
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-38 Score=363.51 Aligned_cols=212 Identities=28% Similarity=0.405 Sum_probs=182.9
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCC--CCChHHHhccc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS--LIGLHDLRSRL 1323 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~--~i~l~~LR~~i 1323 (1496)
|+++||+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999964 35999999999999999999999999999999999999999999999999985 34456788899
Q ss_pred EEEccccc--ccccchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDPV--MFEGTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp~--LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
+++||+|. +|..|+.+|+... ...+ ++++.++++..++.+.... ...+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQ-----------PIQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcC-----------CchhCCHHHHHHHHHH
Confidence 99999985 6778999998631 1122 2345677888887554322 2457999999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++++++..
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998864 47899999999999965 999999999999999999998754
No 297
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.9e-38 Score=352.83 Aligned_cols=197 Identities=31% Similarity=0.447 Sum_probs=170.2
Q ss_pred EEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEE
Q 039402 1247 DLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSII 1326 (1496)
Q Consensus 1247 ~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1326 (1496)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++++
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999964 35999999999999999999999999999999999999999999999998874 578899999
Q ss_pred cccccc---cccchhhccCCC-CC----------CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1327 PQDPVM---FEGTVRSNLDPL-EE----------STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1327 pQdp~L---F~gTIR~NLdp~-~~----------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
||+|.+ |..|+++|+... .. ..++++.++++..++.+...+. ..+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----------IGELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHH
Confidence 999976 668999998632 11 1235678889999887654432 3579999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
|||||+++|++|||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999999864 57899999999999976 8999999987 55543
No 298
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=369.62 Aligned_cols=226 Identities=22% Similarity=0.328 Sum_probs=188.7
Q ss_pred eEEEEeEEeEeCC--CCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC----CCccEEEECCeeCCCCChHH
Q 039402 1245 KIDLLDLQVRYAP--QMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE----PAAGQILIDGIDISLIGLHD 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~--~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e----p~~G~I~IDG~dI~~i~l~~ 1318 (1496)
-++++|++++|.. +...+|+||||+|++||.+||||+||||||||+++|.|+.+ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22459999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----cccEEEccccc--ccc-cchhhccC-C---C---C----C--CcHHHHHHHHHHcCCcHHHHhccCCccccccc
Q 039402 1319 LR----SRLSIIPQDPV--MFE-GTVRSNLD-P---L---E----E--STDEQIWEALDKCQLGDEVRKKEGKLDSKVTE 1378 (1496)
Q Consensus 1319 LR----~~i~iIpQdp~--LF~-gTIR~NLd-p---~---~----~--~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e 1378 (1496)
++ ++|++|||||. ++. -||.+|+. + . + . ..++++.++|++++|.+.-.. + ..
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~----~----~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDA----M----RS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHH----H----hC
Confidence 53 47999999996 333 48888874 1 1 1 0 113467889999998643110 1 12
Q ss_pred CCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeC
Q 039402 1379 NGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNH 1455 (1496)
Q Consensus 1379 ~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~ 1455 (1496)
....||||||||++|||||+.+|+|||+||||++||+.+...|.+.|++..+ ++|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 2357899999999999999999999999999999999999999999998653 7899999999999976 999999999
Q ss_pred CeEeEecChhhHhhcCCcHHHHH
Q 039402 1456 GLIEEFDNPANLLENKSSSFSQL 1478 (1496)
Q Consensus 1456 G~IvE~g~p~~Ll~~~~s~F~~l 1478 (1496)
|+|+|.|+++++++++...|.+.
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~ 257 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQA 257 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHH
Confidence 99999999999998766666553
No 299
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=352.38 Aligned_cols=208 Identities=26% Similarity=0.381 Sum_probs=183.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++||+++|+. . ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~-~---~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHH-L---PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECC-c---cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 789999999964 2 249999999999999999999999999999999999999999999999886644 3578999
Q ss_pred Eccccccccc-chhhccCC-CC-C-----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDP-LE-E-----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp-~~-~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|.+ |+++|+.. +. . ..++++.++++.+++.+.+.+.| ..||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 99999973 21 1 23456889999999877666555 36899999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
+++|+++||||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999998653 7899999999999876 999999999999999999999854
No 300
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=8e-38 Score=366.59 Aligned_cols=211 Identities=24% Similarity=0.346 Sum_probs=187.1
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++|++++|.+ ..+|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999964 459999999999999999999999999999999999999999999999999977 44678999999
Q ss_pred Eccccccccc-chhhccCCCC---CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPLE---EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|.+ |+++||.... ..+ .+++.++++..++.+...+ ...+||+|||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHK-----------KIGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcC-----------chhhCCHHHHHHHHHHHHH
Confidence 9999999987 9999996321 122 3456777888877655332 2457999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
+++|++|+|||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||||++|++|++++.|+++++.++
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999998778999999999999987 999999999999999999999754
No 301
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-38 Score=359.27 Aligned_cols=213 Identities=23% Similarity=0.364 Sum_probs=182.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH-hccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i 1323 (1496)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |.++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5999999999964 369999999999999999999999999999999999999999999999999998876664 4569
Q ss_pred EEEccccccccc-chhhccCCCCC-------------------C---cHHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLEE-------------------S---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1380 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~~-------------------~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1380 (1496)
+++||+|.+|.+ |+++|+..... . ..+++.++++..++.+ ......
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~ 151 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLE-----------HANRQA 151 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhh-----------hhhCCh
Confidence 999999999986 99999974210 0 0123445555555533 333445
Q ss_pred CCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCe
Q 039402 1381 ENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGL 1457 (1496)
Q Consensus 1381 ~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ 1457 (1496)
.+||+|||||++||||++.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|+
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 68999999999999999999999999999999999999999999987643 6899999999999976 99999999999
Q ss_pred EeEecChhhHhhc
Q 039402 1458 IEEFDNPANLLEN 1470 (1496)
Q Consensus 1458 IvE~g~p~~Ll~~ 1470 (1496)
+++.|+++++.++
T Consensus 232 i~~~~~~~~~~~~ 244 (255)
T PRK11300 232 PLANGTPEEIRNN 244 (255)
T ss_pred EEecCCHHHHhhC
Confidence 9999999998753
No 302
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.2e-37 Score=357.03 Aligned_cols=223 Identities=23% Similarity=0.336 Sum_probs=186.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC----CccEEEECCeeCCCCChHHHh
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP----AAGQILIDGIDISLIGLHDLR 1320 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep----~~G~I~IDG~dI~~i~l~~LR 1320 (1496)
.|+++|++++| . .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 59999999999 2 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cccEEEccccc-ccc--cchhhccCC----C-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1321 SRLSIIPQDPV-MFE--GTVRSNLDP----L-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1321 ~~i~iIpQdp~-LF~--gTIR~NLdp----~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
++++|+||+|. .|. .|+.+|+.. . ....+++++++++++++.+. ++.+......||+|||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHHH
Confidence 67999999985 443 477777531 1 12345678999999988642 11233445789999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998653 6899999999999975 99999999999999999999987
Q ss_pred cCCc-HHHHHHH
Q 039402 1470 NKSS-SFSQLVA 1480 (1496)
Q Consensus 1470 ~~~s-~F~~l~~ 1480 (1496)
++.. .++.++.
T Consensus 231 ~~~~~~~~~~~~ 242 (254)
T PRK10418 231 APKHAVTRSLVS 242 (254)
T ss_pred CCCCHHHHHHHH
Confidence 6554 4544554
No 303
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=7.4e-38 Score=352.31 Aligned_cols=209 Identities=26% Similarity=0.374 Sum_probs=181.8
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++||+++|.. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcccccccccchhhccCC----CCC-CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1325 IIPQDPVMFEGTVRSNLDP----LEE-STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1325 iIpQdp~LF~gTIR~NLdp----~~~-~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
++||+|.+|+.|+++|+.. ... ..++++.++++..++.+.. ......+||+|||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTI----------LTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHH----------hcCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999963 111 1234566788888775321 223456899999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEe-CCeEeEecChh
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLN-HGLIEEFDNPA 1465 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~-~G~IvE~g~p~ 1465 (1496)
+|+++||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|+ ++..++.|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999998653 789999999999998899999995 55566778775
No 304
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-38 Score=350.94 Aligned_cols=200 Identities=27% Similarity=0.445 Sum_probs=173.4
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999963 359999999999999999999999999999999999999999999999998753 56789999
Q ss_pred Eccccccccc-chhhccCCCC---CC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPLE---ES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~~---~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||++.+|.+ |+++|+.... .. .++++.++++..++.+...+ ...+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANK-----------RVEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhC-----------cHhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999985321 11 13456677777777554432 3457999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998864 46899999999999876 9999999999998865
No 305
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8e-38 Score=363.15 Aligned_cols=213 Identities=31% Similarity=0.501 Sum_probs=189.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.|+++||+.+|..+ ..+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 47899999999742 3599999999999999999999999999999999999999999999999998765 778999999
Q ss_pred EEccccccccc-chhhccCCCC-------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPLE-------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~~-------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARA 1396 (1496)
|+||+|.+++. |++|||+.+. ...++.+.+.++..+|.+.- +. ....||+|||||+.||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~----~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NK----KVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Cc----chhhcCHHHHHHHHHHHH
Confidence 99999998876 9999997532 12356788999999997622 11 235689999999999999
Q ss_pred HccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC-C-cEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1397 LLKRSKILMLDEATASVDTATDNLIQQTLRQHFS-D-CTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1397 LLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~-~-~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|+.+|++|||||||++||+.+...+.+.|++..+ + +||++.+|.++.+.. ||+|++|++|+++.+|+++++.+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999875 4 699999999999988 999999999999999999998654
No 306
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.2e-37 Score=351.80 Aligned_cols=207 Identities=28% Similarity=0.398 Sum_probs=173.5
Q ss_pred EEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCCh---HHHh
Q 039402 1246 IDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL---HDLR 1320 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR 1320 (1496)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 269999999999999999999999999999999999999999999999999988763 5788
Q ss_pred cccEEEcccc--ccc-ccchhhccCC----CC-CCcHHH---H-HHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1321 SRLSIIPQDP--VMF-EGTVRSNLDP----LE-ESTDEQ---I-WEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1321 ~~i~iIpQdp--~LF-~gTIR~NLdp----~~-~~sd~e---I-~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
++++|+||+| .++ ..|+++|+.. .. ...+++ . .++++..++.+ ........+||+|||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 8999999999 344 4699999852 11 112221 1 25566666531 122334467999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
||++||||++++|+||+|||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999999998754 7899999999999984 9999999999998865
No 307
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=9.6e-38 Score=350.91 Aligned_cols=203 Identities=28% Similarity=0.398 Sum_probs=175.5
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH---Hhcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LRSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~ 1322 (1496)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999533 46999999999999999999999999999999999999999999999999998876543 6889
Q ss_pred cEEEccccccc-ccchhhccCCC---CCCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1323 LSIIPQDPVMF-EGTVRSNLDPL---EESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1323 i~iIpQdp~LF-~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
++|+||+|.+| ..|+++|+... ...++ +++.++++..++.+...+. ..+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNF-----------PIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------chhCCHHHHHHHHHH
Confidence 99999999874 66999999632 12222 3466788888876654433 357999999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeE
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE 1460 (1496)
||++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999864 46899999999999986 89999999999864
No 308
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8.9e-38 Score=358.69 Aligned_cols=211 Identities=26% Similarity=0.381 Sum_probs=185.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999999888888889999
Q ss_pred Eccccc-ccccchhhccCCCC---------C--CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHH
Q 039402 1326 IPQDPV-MFEGTVRSNLDPLE---------E--STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCL 1393 (1496)
Q Consensus 1326 IpQdp~-LF~gTIR~NLdp~~---------~--~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~L 1393 (1496)
+||+|. .+..|+++|+.... . ..++++.++++++++.+...+ ....||+|||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADR-----------DMSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHH
Confidence 999985 45679999995321 0 123467888988888654332 235799999999999
Q ss_pred HHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1394 GRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS-DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1394 ARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
|||++.+|+++||||||++||+.+...+.+.|++..+ +.|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999997643 6899999999999954 99999999999999999999864
No 309
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=356.55 Aligned_cols=223 Identities=25% Similarity=0.397 Sum_probs=189.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC------eeCCCCChHH
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG------IDISLIGLHD 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG------~dI~~i~l~~ 1318 (1496)
.|+++|++++|.. +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.++| .|+.+.+...
T Consensus 10 ~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 5999999999964 4599999999999999999999999999999999999999997666655 6777777778
Q ss_pred HhcccEEEccccccccc-chhhccCCC----CCCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1319 LRSRLSIIPQDPVMFEG-TVRSNLDPL----EESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1319 LR~~i~iIpQdp~LF~g-TIR~NLdp~----~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
+|++++|+||+|.+|.+ |+++|+... +...+ +.+.++++..++.+.+.. .....+..||+||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~LS~G~~q 160 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD-------RLNSPASQLSGGQQQ 160 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh-------hhcCCcccCCHHHHH
Confidence 89999999999999976 999999721 11122 235677788887654311 123345679999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
|++||||++++|++|+|||||++||..+...+.+.|++..+++|||+++|+++.+.. ||++++|++|+++++|+++++.
T Consensus 161 rl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 161 RLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999988777999999999999955 9999999999999999999998
Q ss_pred hcCCcHHH
Q 039402 1469 ENKSSSFS 1476 (1496)
Q Consensus 1469 ~~~~s~F~ 1476 (1496)
+++...+.
T Consensus 241 ~~~~~~~~ 248 (257)
T PRK14246 241 TSPKNELT 248 (257)
T ss_pred hCCCcHHH
Confidence 76554443
No 310
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.5e-37 Score=347.42 Aligned_cols=206 Identities=30% Similarity=0.430 Sum_probs=186.6
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|+++.|+.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 37899999999632 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 039402 684 AYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDI 763 (1496)
Q Consensus 684 ~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1496)
+|++|++.+++.|++||+.+......++..+.++..++.+.+..+|.|.++..++.+.+||||||||++||||++.+|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987766667777778888899888999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecC
Q 039402 764 YLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGK 824 (1496)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~ 824 (1496)
+||||||++||+.+...+.+ .+....+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQK-TIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999888765 5555556799999999999988899999999999998775
No 311
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1e-37 Score=371.68 Aligned_cols=204 Identities=22% Similarity=0.330 Sum_probs=177.3
Q ss_pred ccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCe----eCCCCChHHH---h-cccEEEcccccc
Q 039402 1261 LVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI----DISLIGLHDL---R-SRLSIIPQDPVM 1332 (1496)
Q Consensus 1261 ~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~----dI~~i~l~~L---R-~~i~iIpQdp~L 1332 (1496)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+.+.+ | ++++++||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 4899999999999999999999999999999999999999999999996 6777765554 3 579999999999
Q ss_pred cc-cchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEE
Q 039402 1333 FE-GTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKIL 1404 (1496)
Q Consensus 1333 F~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~IL 1404 (1496)
|+ .|+++|+... ...+ .++..++++.++|.+.....| .+||||||||++|||||+++|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 6999999631 1122 245678899999876654433 468999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHH
Q 039402 1405 MLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSF 1475 (1496)
Q Consensus 1405 iLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F 1475 (1496)
+||||||+||+.+...+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++...|
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~ 260 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDY 260 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHH
Confidence 99999999999999999999988653 7899999999999865 99999999999999999999997665433
No 312
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-38 Score=335.26 Aligned_cols=203 Identities=32% Similarity=0.434 Sum_probs=170.5
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.++++|++..|+ +++.+|+||||+|++||+++|+|++||||||||++|.|..+|++|+|.++|.
T Consensus 3 ~i~~~nl~k~yp--~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYP--GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecC--CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 589999999996 4678999999999999999999999999999999999999999999999982
Q ss_pred --eEEEccCCccC-CCcHHHHhccCCC------------CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHH
Q 039402 683 --KAYVAQSPWIQ-SGKIEDNILFGKE------------MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 683 --~~yv~Q~~~i~-~~ti~eNI~~g~~------------~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 747 (1496)
+||++|++.+- ..|+.+|++.|+- +.++....++++ ++.+ |.....-.+..+|||||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~a------Lerv--gi~~~A~qra~~LSGGQ 152 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDA------LERV--GILDKAYQRASTLSGGQ 152 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHH------HHHc--CcHHHHHHHhccCCcch
Confidence 69999999875 5699999998752 233443334332 1211 11112246778999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCccc-cCCEEEEEeCCeEEEecCh
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKY 825 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~ 825 (1496)
+|||+|||||+++|+|+|-|||+|+|||.+++++++.+.+.. ..|.|+|+.-|++++.. +||||+-|++|+|++.|+.
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999987655433 45899999999999976 5999999999999999999
Q ss_pred HHHH
Q 039402 826 NDLI 829 (1496)
Q Consensus 826 ~~l~ 829 (1496)
+|+-
T Consensus 233 ~el~ 236 (258)
T COG3638 233 SELT 236 (258)
T ss_pred hhhh
Confidence 8863
No 313
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-38 Score=347.88 Aligned_cols=202 Identities=34% Similarity=0.503 Sum_probs=175.4
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.+++++++|+|+.. .++|+|+||++++|+.++|+|+||||||||++++.|.++|++|.|.++|.
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 47889999999743 68999999999999999999999999999999999999999999999873
Q ss_pred eEEEccCC--ccCCCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 KAYVAQSP--WIQSGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 ~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
+|||+|+| .++..||.|.+.||.. ..+ ++.+++++.|++.+.. .+...+|||||||||+|
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~-----------~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELL-----------DRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhc-----------cCCccccCCcceeeHHh
Confidence 69999999 6789999999999953 333 4455667777775543 35668999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|.+|..+|+++|||||||+||+...+.+.+.+.+...+ ++|+|++|||++.+.. ||++++|++|+++.+|+++++.+.
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999987654433334 6899999999999876 999999999999999999888754
No 314
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.2e-37 Score=347.66 Aligned_cols=201 Identities=25% Similarity=0.419 Sum_probs=176.9
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++||+++|.. +++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+.. .+|+++++
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999963 568999999999999999999999999999999999999999999999987643 46788999
Q ss_pred Eccccccccc-chhhccCC-CC---C---CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDP-LE---E---STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp-~~---~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|.+ |+++|+.. .. . ..++++.++++..++.+...+.| .+||+|||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999975 99999862 21 1 13456788999999876665554 36899999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecC
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDN 1463 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~ 1463 (1496)
+++|+|++|||||+++|.++...+.+.|++..+ ++|+|+|+|+++.+.+ ||+|++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998653 7899999999999876 99999999999999874
No 315
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=7.4e-38 Score=349.64 Aligned_cols=200 Identities=28% Similarity=0.459 Sum_probs=173.1
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCC--CChHHHhccc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL--IGLHDLRSRL 1323 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~--i~l~~LR~~i 1323 (1496)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 578999999964 359999999999999999999999999999999999999999999999999853 3456788999
Q ss_pred EEEcccccccc-cchhhccCCC----CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 039402 1324 SIIPQDPVMFE-GTVRSNLDPL----EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1324 ~iIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LA 1394 (1496)
+|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+. ..+||+|||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAY-----------PAQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhC-----------ccccCHHHHHHHHHH
Confidence 99999999986 5999999642 1222 23466777777775544333 357999999999999
Q ss_pred HHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeE
Q 039402 1395 RVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLI 1458 (1496)
Q Consensus 1395 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~I 1458 (1496)
||++++|++|||||||++||+++.+.+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|+|
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999864 47899999999999976 999999999985
No 316
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.6e-37 Score=355.25 Aligned_cols=222 Identities=21% Similarity=0.356 Sum_probs=184.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCee-----CCCCChHH-
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGID-----ISLIGLHD- 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~d-----I~~i~l~~- 1318 (1496)
.|+++|++++|.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5999999999964 359999999999999999999999999999999999999999999999999 87776655
Q ss_pred ---HhcccEEEccccc--ccc-cchhhccC----CCCCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCC
Q 039402 1319 ---LRSRLSIIPQDPV--MFE-GTVRSNLD----PLEES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWS 1384 (1496)
Q Consensus 1319 ---LR~~i~iIpQdp~--LF~-gTIR~NLd----p~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1384 (1496)
.|++++|+||+|. ++. .|+++|+. .+... .++++.++++..++.+ ......+.+||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 153 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTFS 153 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccCC
Confidence 3567999999984 333 47888874 12211 1234555666665532 12335567899
Q ss_pred chHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEe
Q 039402 1385 MGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1385 ~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~ 1461 (1496)
+|||||++||||++++|+||+|||||++||+.+.+.+.+.|++..+ +.|||+|+|+++.+.+ ||+|++|++|++++.
T Consensus 154 ~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~ 233 (258)
T PRK11701 154 GGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVES 233 (258)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987653 7899999999999985 999999999999999
Q ss_pred cChhhHhhcCCcHHHHH
Q 039402 1462 DNPANLLENKSSSFSQL 1478 (1496)
Q Consensus 1462 g~p~~Ll~~~~s~F~~l 1478 (1496)
|+|+++..++...|.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~ 250 (258)
T PRK11701 234 GLTDQVLDDPQHPYTQL 250 (258)
T ss_pred CCHHHHhcCCCCHHHHH
Confidence 99999987655445443
No 317
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-34 Score=322.71 Aligned_cols=505 Identities=16% Similarity=0.137 Sum_probs=341.3
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 039402 292 IKAMFCSVWKDVLVTGFLTVLYTLASYVGPYLIDTFVQYLNGRRDFENEGYVLVSAFCVAKLV-ECLCQRFRVFRLQQLG 370 (1496)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~~i~~~~~~~~~~~~g~~l~~~l~~~~~~-~~l~~~~~~~~~~~~~ 370 (1496)
.-.++|.+++.++....+.++..+.. ..++-.+-+++............+.+++++..++ +.+++. ...-+|
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~~g---~~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~is~l----g~t~~g 76 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGALG---IGLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLISQL----GLTTLG 76 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHHHHH----HHHHHH
Confidence 45678889988887766666555443 3334333344432221111111111122222222 222222 223345
Q ss_pred HHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 039402 371 IRMRAALIAMIYNKGLTLSSQAKQGQSSGEIINFMTVDAERVADFSWYIHDPWLVLFEVALSILILYKNLGIASLAALFG 450 (1496)
Q Consensus 371 ~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~~~lL~~~lg~~~l~~l~~ 450 (1496)
.+.-..++..+-+|.+.-+....++.+++.++..++.|+..|.-.+..+.+...+.+-+..++..|++.-+..++..++.
T Consensus 77 q~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ 156 (546)
T COG4615 77 QHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVW 156 (546)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 55555666677888888888888888999999999999999996666777666666556666666766777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHH--HHHHHH-HHHHHHHHHHHHHHHHHHHH-
Q 039402 451 TVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGWEM--KFLSKI-INLRKRETGWLKKYVYTSAI- 526 (1496)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~wE~--~~~~~i-~~~R~~E~~~l~~~~~~~~~- 526 (1496)
+++.+..+.....+..+...+..+..|+-.+..+.++.|-|.+|++.-.. .+.+.+ .+.++.+- ...+...+
T Consensus 157 ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~----~~~~~n~f~ 232 (546)
T COG4615 157 IVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRH----HIIRANTFH 232 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHh----hhhhhhHHH
Confidence 77777777777777777777888899999999999999999999886432 222222 11222221 11111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 039402 527 SSFVFWGAPTFVSVATFGTCILLNVPL-ESGKMLSAIATFRLLQVPIYNLPDVISMIIQTKVSLQRIASFFCLDDLQPDL 605 (1496)
Q Consensus 527 ~~~~~~~~p~~v~~~~f~~~~~~~~~L-~~~~vft~l~l~~~l~~pl~~lp~~i~~~~~a~vs~~Ri~~fL~~~e~~~~~ 605 (1496)
+....|...++.+++....|+...-.. +...+.|....+-.++.|+.++...+..+.+|.++++||.++=..|+...-
T Consensus 233 ~la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~- 311 (546)
T COG4615 233 LLAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADF- 311 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccC-
Confidence 123345544454444444333332111 222445555556678899999999999999999999999997543332211
Q ss_pred ccCCCCCCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCee--
Q 039402 606 VEKQPSGSSETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTK-- 683 (1496)
Q Consensus 606 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~~-- 683 (1496)
...++. +.-..++++|+.|+|... ..-+..||++|++||++-|+|.||||||||++++.|+++|++|+|.+||+.
T Consensus 312 ~~~q~~-p~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~ 388 (546)
T COG4615 312 PRPQAF-PDWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVS 388 (546)
T ss_pred CCCCcC-CcccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccCC
Confidence 111111 123469999999999743 377899999999999999999999999999999999999999999999964
Q ss_pred -----------EEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 684 -----------AYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 684 -----------~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
+-|+-+-|+|..++ -+.. .+++..++-++...+..-.+ +.+|.-+ ...||.|||+|+
T Consensus 389 ~e~ledYR~LfSavFsDyhLF~~ll-----~~e~~as~q~i~~~LqrLel~~kts-l~d~~fs-----~~kLStGQkKRl 457 (546)
T COG4615 389 AEQLEDYRKLFSAVFSDYHLFDQLL-----GPEGKASPQLIEKWLQRLELAHKTS-LNDGRFS-----NLKLSTGQKKRL 457 (546)
T ss_pred CCCHHHHHHHHHHHhhhHhhhHhhh-----CCccCCChHHHHHHHHHHHHhhhhc-ccCCccc-----ccccccchHHHH
Confidence 23444455554332 1222 34555555555544433222 2222221 247999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCccccCCEEEEEeCCeEEEe
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPAADLILVMKDGKITQA 822 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 822 (1496)
++--|+..+.|||+|||=-+--||+=++..++..+-.+ ..||||+.||||-.+...|||++.|++|++++.
T Consensus 458 All~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 458 ALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 99999999999999999999999999998888777544 359999999999999999999999999999874
No 318
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.2e-37 Score=365.50 Aligned_cols=203 Identities=26% Similarity=0.408 Sum_probs=177.1
Q ss_pred EeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEccccccc
Q 039402 1254 RYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMF 1333 (1496)
Q Consensus 1254 ~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF 1333 (1496)
+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++++||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4643 359999999999999999999999999999999999999999999999999976 3456789999999999999
Q ss_pred cc-chhhccCCCC---CC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEE
Q 039402 1334 EG-TVRSNLDPLE---ES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILM 1405 (1496)
Q Consensus 1334 ~g-TIR~NLdp~~---~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILi 1405 (1496)
.+ |+++|+.... .. .++++.++++.+++.+...+. ..+||||||||++|||||+++|++|+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRP-----------VGTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCc-----------hhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 76 9999996421 11 134577888888886543322 35799999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhc
Q 039402 1406 LDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1406 LDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999999864 46899999999999976 999999999999999999999764
No 319
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-37 Score=369.61 Aligned_cols=213 Identities=23% Similarity=0.388 Sum_probs=186.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCC----ChHHHhc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLHDLRS 1321 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~~LR~ 1321 (1496)
|++ |++++|... . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... .....|+
T Consensus 2 l~~-~l~k~~~~~---~-~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---C-LTVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---E-EEEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 2 399999999999999999999999999999999999999999999998753 2456788
Q ss_pred ccEEEcccccccc-cchhhccCC-CCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1322 RLSIIPQDPVMFE-GTVRSNLDP-LEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~-gTIR~NLdp-~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
+++|+||++.+|. .|+++|+.. .....++++.++++.+++.+.....| .+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 9999999999997 499999974 23345667889999998876655544 4789999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcH
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSS 1474 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~ 1474 (1496)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++...
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~~ 223 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAMR 223 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcchh
Confidence 9999999999999999999999999998754 6899999999998876 9999999999999999999999877543
No 320
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.6e-37 Score=354.19 Aligned_cols=212 Identities=25% Similarity=0.297 Sum_probs=178.7
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc--CCCccEEEECCeeCCCCChHHH-hcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIV--EPAAGQILIDGIDISLIGLHDL-RSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~L-R~~ 1322 (1496)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 35999999999999999999999999999999999994 7999999999999988877664 456
Q ss_pred cEEEccccccccc-chhhccCCC----CC------Cc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1323 LSIIPQDPVMFEG-TVRSNLDPL----EE------ST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1323 i~iIpQdp~LF~g-TIR~NLdp~----~~------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
++++||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.. ++..+. ..||+||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G~ 149 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGGE 149 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHHH
Confidence 9999999999987 899998421 10 11 24566777777775321 121111 2499999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc--cCEEEEEeCCeEeEecCh
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID--SDLVLLLNHGLIEEFDNP 1464 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~--~DrIlVL~~G~IvE~g~p 1464 (1496)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++
T Consensus 150 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (243)
T TIGR01978 150 KKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDV 229 (243)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCH
Confidence 999999999999999999999999999999999999999865 46899999999999986 799999999999999999
Q ss_pred hhHh
Q 039402 1465 ANLL 1468 (1496)
Q Consensus 1465 ~~Ll 1468 (1496)
++.-
T Consensus 230 ~~~~ 233 (243)
T TIGR01978 230 ELAK 233 (243)
T ss_pred HHhc
Confidence 8654
No 321
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=368.26 Aligned_cols=203 Identities=28% Similarity=0.407 Sum_probs=171.8
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEE
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~y 685 (1496)
.++++|++++|+ +++++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~--~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYD--GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeC--CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 478999999994 1357999999999999999999999999999999999999999999999984 699
Q ss_pred EccCCccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 686 VAQSPWIQS-GKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 686 v~Q~~~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
|+|++.+|. .|++|||.|+.. .+. ++..++++..++.+. .++...+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPL-----------LDRKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhH-----------hhCChhhCCHHHHHHHHHHHHH
Confidence 999999985 699999999753 222 233344555554332 3456689999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
+.+|+++|||||||+||+.+...+.+.+.+...+ +.|+|+|||+.+.+. .||+|++|++|++++.|+++++.+..
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 9999999999999999999999887655433333 899999999998875 49999999999999999999987653
No 322
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2e-37 Score=366.06 Aligned_cols=203 Identities=24% Similarity=0.354 Sum_probs=169.7
Q ss_pred EEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 618 LDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
++++|++++|+..+ ..++|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|.
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 68999999996322 347999999999999999999999999999999999999999999999873
Q ss_pred --eEEEccCCccCC-CcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 --KAYVAQSPWIQS-GKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 --~~yv~Q~~~i~~-~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
++|++|++.++. .|++|||.++.. .+++ +..++++..++.+ .....+.+|||||||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~-----------~~~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGD-----------KHDSYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHHHHHHH
Confidence 699999999885 699999998642 2222 2233344444322 234667899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
|||||+.+|+++|||||||+||+.+...+.+.+.+...+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 999999999999999999999999999887544333233 8999999999999865 99999999999999999999875
Q ss_pred c
Q 039402 831 S 831 (1496)
Q Consensus 831 ~ 831 (1496)
.
T Consensus 231 ~ 231 (343)
T TIGR02314 231 H 231 (343)
T ss_pred C
Confidence 4
No 323
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=355.08 Aligned_cols=211 Identities=26% Similarity=0.353 Sum_probs=184.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCC--------ccEEEECCeeCCCCChH
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPA--------AGQILIDGIDISLIGLH 1317 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~--------~G~I~IDG~dI~~i~l~ 1317 (1496)
|+++|++++|.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999888888
Q ss_pred HHhcccEEEccccc-ccccchhhccCCCC--------CC---cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 039402 1318 DLRSRLSIIPQDPV-MFEGTVRSNLDPLE--------ES---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1385 (1496)
Q Consensus 1318 ~LR~~i~iIpQdp~-LF~gTIR~NLdp~~--------~~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1385 (1496)
.+|+.++++||++. +|..|+++|+.... .. .++.++++++..++.+.. ......||+
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALV-----------GRDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCH
Confidence 88889999999986 67889999996321 11 234567788888775432 234467999
Q ss_pred hHHHHHHHHHHHc---------cCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEE
Q 039402 1386 GQRQLVCLGRVLL---------KRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLL 1453 (1496)
Q Consensus 1386 GQrQll~LARALL---------r~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL 1453 (1496)
|||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999998653 6899999999999975 9999999
Q ss_pred eCCeEeEecChhhHhh
Q 039402 1454 NHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1454 ~~G~IvE~g~p~~Ll~ 1469 (1496)
++|++++.|+++++++
T Consensus 229 ~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 229 ADGAIVAHGAPADVLT 244 (272)
T ss_pred ECCeEEEecCHHHHcC
Confidence 9999999999999975
No 324
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.2e-36 Score=394.10 Aligned_cols=228 Identities=22% Similarity=0.292 Sum_probs=156.7
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHh------ccc---CCCccEEEECC-------
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLF------RIV---EPAAGQILIDG------- 1308 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~------rl~---ep~~G~I~IDG------- 1308 (1496)
.++++|++. ..|+|+|++|++||.+||+|.+|||||||+.-++ ++. .+..+...++|
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 588888852 2599999999999999999999999999998764 212 12333333444
Q ss_pred -----eeCCC---------CCh-HHHhcccEE---------Ecccccccc-----------cchhhccCCCCC-------
Q 039402 1309 -----IDISL---------IGL-HDLRSRLSI---------IPQDPVMFE-----------GTVRSNLDPLEE------- 1346 (1496)
Q Consensus 1309 -----~dI~~---------i~l-~~LR~~i~i---------IpQdp~LF~-----------gTIR~NLdp~~~------- 1346 (1496)
.+|.. .+. +.+|.-.+= -++.-.+.. |+++.|+....+
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 33321 111 334444332 223222221 456655542211
Q ss_pred -----------------CcHHH-----HHHHHHHc----CCc---HHHHhccCCccc-ccccCCCCCCchHHHHHHHHHH
Q 039402 1347 -----------------STDEQ-----IWEALDKC----QLG---DEVRKKEGKLDS-KVTENGENWSMGQRQLVCLGRV 1396 (1496)
Q Consensus 1347 -----------------~sd~e-----I~~aL~~~----~L~---~~i~~lp~gLdt-~v~e~G~nLS~GQrQll~LARA 1396 (1496)
.+-.| +.++++-. .+. +.+.. -||+. .++.....||||||||+.|||+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~--vgL~~l~l~~~~~tLSgGEkQRl~LAra 844 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVD--VGLGYIKLGQPATTLSGGEAQRVKLAKE 844 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHH--CCCCcccccCCcccCCHHHHHHHHHHHH
Confidence 11111 22222221 011 11111 25554 3567778999999999999999
Q ss_pred HccCC---CEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcccCEEEEE------eCCeEeEecChhh
Q 039402 1397 LLKRS---KILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVIDSDLVLLL------NHGLIEEFDNPAN 1466 (1496)
Q Consensus 1397 LLr~~---~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~~DrIlVL------~~G~IvE~g~p~~ 1466 (1496)
|+++| +++||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|++
T Consensus 845 L~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~e 924 (943)
T PRK00349 845 LSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEE 924 (943)
T ss_pred HhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHH
Confidence 99999 9999999999999999999999998864 578999999999999999999999 7999999999999
Q ss_pred HhhcCCcHHHHHHHH
Q 039402 1467 LLENKSSSFSQLVAE 1481 (1496)
Q Consensus 1467 Ll~~~~s~F~~l~~~ 1481 (1496)
+.+++.|.=.+...+
T Consensus 925 l~~~~~s~t~~~l~~ 939 (943)
T PRK00349 925 VAKVEASYTGRYLKP 939 (943)
T ss_pred HHhCcccHHHHHHHH
Confidence 998776655555443
No 325
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.7e-37 Score=368.48 Aligned_cols=190 Identities=27% Similarity=0.382 Sum_probs=162.3
Q ss_pred CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC-----------------eeEEEccCCccCC
Q 039402 632 HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-----------------TKAYVAQSPWIQS 694 (1496)
Q Consensus 632 ~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g-----------------~~~yv~Q~~~i~~ 694 (1496)
++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++||+|++++++
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 46799999999999999999999999999999999999999999999988 3699999999987
Q ss_pred -CcHHHHhccCCCC---CH-HHHHHH---HHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEE
Q 039402 695 -GKIEDNILFGKEM---NR-ERYNAV---LDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLF 766 (1496)
Q Consensus 695 -~ti~eNI~~g~~~---~~-~~~~~v---~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illL 766 (1496)
.||+|||.|+.++ +. ++.+++ ++..+| ....++.+.+|||||||||+|||||+.+|+|+||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL-----------~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGL-----------EEYEHRYPDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCC-----------chhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 5999999987532 22 222333 333333 2335677889999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 039402 767 DDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 767 Dep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
||||||||+.+++.+++.+..... .++|+|+|||+++++.. ||+|++|++|++++.|++++++.+.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p 221 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNP 221 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCc
Confidence 999999999999999877665443 48999999999998654 9999999999999999999987653
No 326
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-37 Score=349.61 Aligned_cols=200 Identities=30% Similarity=0.376 Sum_probs=165.4
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 36789999995 357999999999999999999999999999999999999999999999772
Q ss_pred -eEEEccCCccCCC-cHHHHhccCCC----CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 -KAYVAQSPWIQSG-KIEDNILFGKE----MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 -~~yv~Q~~~i~~~-ti~eNI~~g~~----~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
++|++|++.++.. |++||+.++.. .+.+ +..++++.+++.+ .......+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRG-----------AEDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHHH
Confidence 5899999988875 99999987632 2222 2223333333321 234566799999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
||||++.+|+++||||||++||+.+...+.+.+..... .++|+|+|||+++++.. ||+|++|++|++++.|+++++..
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999998888754433333 38999999999998765 99999999999999999988764
Q ss_pred c
Q 039402 831 S 831 (1496)
Q Consensus 831 ~ 831 (1496)
.
T Consensus 227 ~ 227 (235)
T cd03261 227 S 227 (235)
T ss_pred C
Confidence 4
No 327
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-37 Score=361.26 Aligned_cols=210 Identities=26% Similarity=0.399 Sum_probs=170.6
Q ss_pred ccEEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC------------
Q 039402 616 TALDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------ 681 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g------------ 681 (1496)
..++++|++|+|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 4689999999996321 24699999999999999999999999999999999999999999999875
Q ss_pred -----------------eeEEEccCC--ccCCCcHHHHhccCCC---CCHHHHHHHHHHhchhhHHHhccCCCcccccCC
Q 039402 682 -----------------TKAYVAQSP--WIQSGKIEDNILFGKE---MNRERYNAVLDACSLKKDLEILSFGDQTVIGER 739 (1496)
Q Consensus 682 -----------------~~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~ 739 (1496)
.++||+|+| ++++.|++|||.|+.. .+.+...+.. .+.++.+... ....++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~l~~~gL~-~~~~~~~ 173 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLA-----KFYLNKMGLD-DSYLERS 173 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHH-----HHHHHHcCCC-hhHhcCC
Confidence 158999998 7888999999998742 2222221111 1122222211 1235678
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccc-cCCEEEEEeCCe
Q 039402 740 GINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLP-AADLILVMKDGK 818 (1496)
Q Consensus 740 g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~ 818 (1496)
+.+||||||||++|||||+.+|+++||||||++||+.+...+.+.+.....+|+|+|+|||+++++. .||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 8999999999999999999999999999999999999998887544333346899999999999875 599999999999
Q ss_pred EEEecChHHHHhc
Q 039402 819 ITQAGKYNDLINS 831 (1496)
Q Consensus 819 i~~~G~~~~l~~~ 831 (1496)
+++.|+++++...
T Consensus 254 i~~~g~~~~~~~~ 266 (320)
T PRK13631 254 ILKTGTPYEIFTD 266 (320)
T ss_pred EEEeCCHHHHhcC
Confidence 9999999988654
No 328
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-37 Score=331.30 Aligned_cols=205 Identities=26% Similarity=0.418 Sum_probs=171.7
Q ss_pred cEEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 617 ALDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
.++++|.++.|+... ..++|+||||++.+||..+|+|+||||||||.++|+|..+|++|+|.++|+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 588999999997321 125999999999999999999999999999999999999999999999993
Q ss_pred -eEEEccCCcc---CCCcHHHHhccCCC-----CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 -KAYVAQSPWI---QSGKIEDNILFGKE-----MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 -~~yv~Q~~~i---~~~ti~eNI~~g~~-----~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
+-+|+|+|.- ...||++-|.-+.. -.+++..++++..+|.+.. ..+++.+|||||+|||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~----------l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF----------LDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH----------HhcCchhcChhHHHHHHH
Confidence 4699999963 34578777754332 2344566777777775543 346778999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||||..+|+++|||||||+||+.+...|++-+.+.. ..+-|.|+||||+..+.+ ||||.||++|++++.++.+++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 999999999999999999999999999986544332 236799999999999987 999999999999999999998765
No 329
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=9.1e-37 Score=342.56 Aligned_cols=205 Identities=36% Similarity=0.537 Sum_probs=181.7
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|+++.|+. ..+++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~-~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPN-QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCC-CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 4789999999953 2357999999999999999999999999999999999999999999999883 6
Q ss_pred EEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCC
Q 039402 684 AYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSD 762 (1496)
Q Consensus 684 ~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1496)
+|++|+++++..|++||+.++.. .++++..+.++.+++.+.++..|.|.+|.+.+...+||||||||++||||+..+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 89999999988899999988753 34556677888889988888999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEec
Q 039402 763 IYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAG 823 (1496)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G 823 (1496)
++||||||++||+.+...+.+ .+....+++|+|++||+++.+..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKE-RLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999888865 455554458999999999988679999999999998654
No 330
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.1e-37 Score=352.99 Aligned_cols=210 Identities=21% Similarity=0.302 Sum_probs=181.6
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCC---ccEEEECCeeCCCC-----Ch
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPA---AGQILIDGIDISLI-----GL 1316 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~---~G~I~IDG~dI~~i-----~l 1316 (1496)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... ..
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 5899999999963 35999999999999999999999999999999999999986 49999999998754 24
Q ss_pred HHHhcccEEEccccccccc-chhhccCCCC---------------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 039402 1317 HDLRSRLSIIPQDPVMFEG-TVRSNLDPLE---------------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1380 (1496)
Q Consensus 1317 ~~LR~~i~iIpQdp~LF~g-TIR~NLdp~~---------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1380 (1496)
..+|++++|+||++.+|.+ |+++|+.... ...++++.++++..++.+.... ..
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------RV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------Cc
Confidence 5678899999999998875 9999996210 1123457778888887654433 33
Q ss_pred CCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCe
Q 039402 1381 ENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGL 1457 (1496)
Q Consensus 1381 ~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ 1457 (1496)
.+||+|||||++||||++.+|++|||||||++||.++.+.+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 5799999999999999999999999999999999999999999999875 37899999999998755 99999999999
Q ss_pred EeEecChhhH
Q 039402 1458 IEEFDNPANL 1467 (1496)
Q Consensus 1458 IvE~g~p~~L 1467 (1496)
+++.|+|+++
T Consensus 231 i~~~g~~~~~ 240 (262)
T PRK09984 231 VFYDGSSQQF 240 (262)
T ss_pred EEEeCCHHHh
Confidence 9999999996
No 331
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-37 Score=331.23 Aligned_cols=171 Identities=42% Similarity=0.729 Sum_probs=162.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+...+.+++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 57899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEE
Q 039402 1326 IPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILM 1405 (1496)
Q Consensus 1326 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILi 1405 (1496)
+||+|.+|++|+++|+ ||+|||||++||||++++|++|+
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 89999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCe
Q 039402 1406 LDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGL 1457 (1496)
Q Consensus 1406 LDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ 1457 (1496)
|||||++||+.+...+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998877799999999999998899999999985
No 332
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-37 Score=352.18 Aligned_cols=201 Identities=25% Similarity=0.301 Sum_probs=174.1
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +.++++
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4599999999999999999999999999999999999999999999999998642 346899
Q ss_pred Ecccccccc-cchhhccCCC---CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFE-GTVRSNLDPL---EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+||+|.+|. .|+++|+... .... ++++.++++..++.+...+ ...+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKR-----------YIWQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 999999887 5999999632 1122 2457788888887654433 2357999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEe--CCeEeEecCh
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLN--HGLIEEFDNP 1464 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~--~G~IvE~g~p 1464 (1496)
+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|+ +|++++.+++
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999999863 37999999999999876 99999998 5999998764
No 333
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=343.60 Aligned_cols=446 Identities=18% Similarity=0.204 Sum_probs=314.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCCCH--H---HHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHH
Q 039402 360 RFRVFRLQQLGIRMRAALIAMIYNKGLTLSSQAKQGQSS--G---EIINFMTVDAERVADFSWYIH-DPWLVLFEVALSI 433 (1496)
Q Consensus 360 ~~~~~~~~~~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~--G---~i~nl~s~D~~~i~~~~~~~~-~~~~~pl~i~~~~ 433 (1496)
....|..+++..+.|..|...+.+|=+.-....+-.... + ..=+++..|+..+.+....+. .+.-..++++.-.
T Consensus 104 v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~ 183 (604)
T COG4178 104 VAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFT 183 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 345667789999999999999999988877544322111 1 233688899888877544332 3333344444444
Q ss_pred HHHHHHhHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCc
Q 039402 434 LILYKNLGI---------------ASLAALFGTVIVMLVNIPLGRVQENFQDKLMKSKDERMKATSEILRNMRILKLQGW 498 (1496)
Q Consensus 434 ~lL~~~lg~---------------~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~L~~ir~IK~~~w 498 (1496)
.+||...|. ...+.++-+++...+...++|...+...+..+.-..-......+.++...|-+|+-
T Consensus 184 ~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~G 263 (604)
T COG4178 184 GILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRG 263 (604)
T ss_pred HHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcC
Confidence 566644331 11111111222222233344444443333333333334455677888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH
Q 039402 499 EMKFLSKIINLRKRETGWLKKY----VYTSAISSFVFWGAPTFVSVATFGTCILLNVPLESGKMLSAIATFRLLQVPIYN 574 (1496)
Q Consensus 499 E~~~~~~i~~~R~~E~~~l~~~----~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~l~l~~~l~~pl~~ 574 (1496)
|+...+++.+.-..=++..++. ..+..+.....++++++-..+ .+=.++.+.++-|.+..+...|+.+...++.
T Consensus 264 E~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li--~ap~~f~g~i~~G~lmqa~~aF~~v~sslsw 341 (604)
T COG4178 264 EKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILI--AAPRYFSGQITFGGLMQAVGAFGQVHSSLSW 341 (604)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHh--ccHhhhcCcChHHHHHHHHHHHHHHHHHHHH
Confidence 9988777765333222221111 111111222222222111111 1122467899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCC--CCccccCCCC------CCCCccEEEEeeEEEecCCCCCCceeeeeEEEeCC
Q 039402 575 LPDVISMIIQTKVSLQRIASFFCLDDL--QPDLVEKQPS------GSSETALDIVDGNFSWDISSHNPTLKDINLKVFHG 646 (1496)
Q Consensus 575 lp~~i~~~~~a~vs~~Ri~~fL~~~e~--~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G 646 (1496)
+-+.+..+.+=++++.|+.+|-..-|. .++.....+. ...+..|.++|++..-+ ++++.+++.||++++|
T Consensus 342 fi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p--~~~~ll~~l~~~v~~G 419 (604)
T COG4178 342 FIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTP--DGQTLLSELNFEVRPG 419 (604)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECC--CCCeeeccceeeeCCC
Confidence 999999999999999999999854321 0111100000 11146799999999875 3458999999999999
Q ss_pred cEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--eeEEEccCCccCCCcHHHHhccCCC---CCHHHHHHHHHHhch
Q 039402 647 MRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQSGKIEDNILFGKE---MNRERYNAVLDACSL 721 (1496)
Q Consensus 647 ~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--~~~yv~Q~~~i~~~ti~eNI~~g~~---~~~~~~~~v~~~~~l 721 (1496)
|.+.|.||||||||||+++|.|..|--+|+|.... ..-|+||.|.+..||.||-|++... ++++.+.+++..|+|
T Consensus 420 ~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL 499 (604)
T COG4178 420 ERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGL 499 (604)
T ss_pred CEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCc
Confidence 99999999999999999999999999999998873 3689999999999999999999753 678999999999999
Q ss_pred hhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccC
Q 039402 722 KKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQ 801 (1496)
Q Consensus 722 ~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~ 801 (1496)
.+-.+.+...++ -...||+|||||+++||.++++|++++|||.|||||++++..+++ .++..+.+.|+|-|.|+
T Consensus 500 ~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q-~l~~~lp~~tvISV~Hr 573 (604)
T COG4178 500 GDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQ-LLKEELPDATVISVGHR 573 (604)
T ss_pred HHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHH-HHHhhCCCCEEEEeccc
Confidence 998888765443 346899999999999999999999999999999999999999985 56666789999999999
Q ss_pred cCccccCCEEEEEe
Q 039402 802 VEFLPAADLILVMK 815 (1496)
Q Consensus 802 ~~~l~~~d~i~~l~ 815 (1496)
.......++.+.+.
T Consensus 574 ~tl~~~h~~~l~l~ 587 (604)
T COG4178 574 PTLWNFHSRQLELL 587 (604)
T ss_pred hhhHHHHhhheeec
Confidence 88777666666554
No 334
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-37 Score=329.41 Aligned_cols=220 Identities=26% Similarity=0.438 Sum_probs=185.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH-Hhccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1323 (1496)
-++++||+..|.+ -.+|+||||++++||.++++||||+|||||+++|+|+.+|.+|+|.++|.||+..+.|+ .|..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3789999999976 35999999999999999999999999999999999999999999999999999999988 58889
Q ss_pred EEEccccccccc-chhhccCCCCCC-cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLEES-TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS 1401 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~~~-sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~ 1401 (1496)
++|||...+|.. ||.|||...... .+++-++. .+ |.+-++---|.......+.+|||||+|.++|||||..+|
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~-e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~P 155 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DL-EEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRP 155 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccc----cH-HHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCC
Confidence 999999999976 999999742211 11011100 01 111121112444455668899999999999999999999
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcC
Q 039402 1402 KILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1402 ~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~ 1471 (1496)
|+|+|||||.+|-|.--+.|.++|++..+ +-||+.|-++.....+ +||.+||++|+|+..|++++|++++
T Consensus 156 klLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 156 KLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 99999999999999999999999998874 4599999999998876 9999999999999999999999765
No 335
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=3.2e-37 Score=346.08 Aligned_cols=202 Identities=25% Similarity=0.349 Sum_probs=176.6
Q ss_pred EEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH---HHh
Q 039402 1246 IDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLR 1320 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR 1320 (1496)
++++|++++|+++. ..+|+|+||++++||++||+|++|||||||+++|.|+++|++|+|++||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996532 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cccEEEcccccccc-cchhhccCCCC----CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1321 SRLSIIPQDPVMFE-GTVRSNLDPLE----EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1321 ~~i~iIpQdp~LF~-gTIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
++++++||+|.+|. .|+.+|+.... ..+ ++++.++++++++.+...+.| .+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999987 69999997321 222 235677888888876665544 46899999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcccCEEEEEeCCeE
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVIDSDLVLLLNHGLI 1458 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~I 1458 (1496)
+||||++++|++|+|||||++||+++.+.+.+.|++..+ ++|||+|+|+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999988753 7999999999997767999999999986
No 336
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-37 Score=363.05 Aligned_cols=202 Identities=27% Similarity=0.386 Sum_probs=170.1
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEE
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~y 685 (1496)
.++++|++++|. ++++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 6 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 82 (351)
T PRK11432 6 FVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICM 82 (351)
T ss_pred EEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 589999999995 357899999999999999999999999999999999999999999999884 699
Q ss_pred EccCCccCC-CcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 686 VAQSPWIQS-GKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 686 v~Q~~~i~~-~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
|+|++.+|. .|++|||.|+.. .+++ +.+++++..++.. ...+...+|||||||||+|||||
T Consensus 83 vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~-----------~~~r~~~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 83 VFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAG-----------FEDRYVDQISGGQQQRVALARAL 151 (351)
T ss_pred EeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHHHHHHHH
Confidence 999999986 599999999743 2222 2233333333321 23566789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
+.+|+++|||||||+||+.+...+.+.+.....+ ++|+|+|||+.+++.. ||+|++|++|++++.|+++++....
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999887654333333 8999999999998754 9999999999999999999987543
No 337
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.2e-36 Score=342.15 Aligned_cols=204 Identities=26% Similarity=0.427 Sum_probs=178.9
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++||+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999964 35999999999999999999999999999999999999999999999999876422 357999
Q ss_pred Ecccccccc-cchhhccCC---CCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 039402 1326 IPQDPVMFE-GTVRSNLDP---LEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS 1401 (1496)
Q Consensus 1326 IpQdp~LF~-gTIR~NLdp---~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~ 1401 (1496)
+||++.+|. .|+++|+.. ....+++++.++++..++.+..... ..+||+|||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 599999863 1233567888999999987654332 3578999999999999999999
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhh
Q 039402 1402 KILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1402 ~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++.+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999999864 46899999999999865 99999999999999999875
No 338
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-37 Score=331.71 Aligned_cols=172 Identities=34% Similarity=0.521 Sum_probs=159.5
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC--hHHHhccc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG--LHDLRSRL 1323 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--l~~LR~~i 1323 (1496)
|+++|++++|+. .++++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEccccccccc-chhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSK 1402 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ 1402 (1496)
+++||+|.+|.+ |+++|+... ||+|||||++||||++++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999998753 89999999999999999999
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCe
Q 039402 1403 ILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGL 1457 (1496)
Q Consensus 1403 ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ 1457 (1496)
+++|||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999998654 5899999999999985 99999999985
No 339
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.4e-36 Score=350.59 Aligned_cols=221 Identities=27% Similarity=0.371 Sum_probs=184.4
Q ss_pred eEEEEeEEeEeCCC-------CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH
Q 039402 1245 KIDLLDLQVRYAPQ-------MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH 1317 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~-------~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1317 (1496)
.|+++||+++|+.+ ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999741 24699999999999999999999999999999999999999999999999999887653
Q ss_pred ---HHhcccEEEccccc--cc-ccchhhccCC-C---CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 039402 1318 ---DLRSRLSIIPQDPV--MF-EGTVRSNLDP-L---EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1383 (1496)
Q Consensus 1318 ---~LR~~i~iIpQdp~--LF-~gTIR~NLdp-~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1383 (1496)
.+|++++++||+|. ++ ..|+++|+.. . ... .++.+.++++..++... ........|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----------~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDS----------VLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChh----------HhhCCCccC
Confidence 46889999999983 43 4699999742 1 111 12245566666655421 123345689
Q ss_pred CchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeE
Q 039402 1384 SMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1384 S~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE 1460 (1496)
|+|||||++|||||+++|+||||||||++||..+...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 99999999999999999999999999999999999999999988653 7899999999999986 99999999999999
Q ss_pred ecChhhHhhcCCcHHH
Q 039402 1461 FDNPANLLENKSSSFS 1476 (1496)
Q Consensus 1461 ~g~p~~Ll~~~~s~F~ 1476 (1496)
.|+++++.. .++.|.
T Consensus 233 ~g~~~~~~~-~~~~~~ 247 (268)
T PRK10419 233 TQPVGDKLT-FSSPAG 247 (268)
T ss_pred eCChhhccC-CCCHHH
Confidence 999999985 345444
No 340
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=8e-37 Score=365.37 Aligned_cols=212 Identities=25% Similarity=0.389 Sum_probs=182.1
Q ss_pred eEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCC----hHHHhcccEE
Q 039402 1250 DLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG----LHDLRSRLSI 1325 (1496)
Q Consensus 1250 nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~----l~~LR~~i~i 1325 (1496)
|++++|... .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 24 999999999999999999999999999999999999999999999987542 3457889999
Q ss_pred Eccccccccc-chhhccCCC-CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1326 IPQDPVMFEG-TVRSNLDPL-EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~-~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
+||+|.+|.+ |+++|+... .... ++++.+.++..++.+..... ...||||||||++|||||++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRL-----------PGRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHHc
Confidence 9999999976 999999732 1111 23477788888776554433 35789999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHHH
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSFS 1476 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~ 1476 (1496)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++...|.
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 228 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPWL 228 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCcccc
Confidence 9999999999999999999999999998653 6899999999999876 999999999999999999999987765553
No 341
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-37 Score=330.18 Aligned_cols=170 Identities=33% Similarity=0.557 Sum_probs=157.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++|++++|+.. ++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ .++|+++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGKK--TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 4789999999642 5999999999999999999999999999999999999999999999999998765 678899999
Q ss_pred Eccccccccc-chhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEE
Q 039402 1326 IPQDPVMFEG-TVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKIL 1404 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~IL 1404 (1496)
+||+|.+|.+ |+++|+. ||+|||||++||||++++|+||
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999987 9999974 8999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeE
Q 039402 1405 MLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLI 1458 (1496)
Q Consensus 1405 iLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~I 1458 (1496)
+|||||++||+.+.+.+.+.|++.. ++.|+|+++|+.+.+.+ ||+|++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999865 35899999999999884 999999999974
No 342
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=354.91 Aligned_cols=203 Identities=26% Similarity=0.437 Sum_probs=170.0
Q ss_pred EEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 618 LDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996322 246999999999999999999999999999999999999999999999873
Q ss_pred ----eEEEccCC--ccCCCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHH
Q 039402 683 ----KAYVAQSP--WIQSGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 749 (1496)
Q Consensus 683 ----~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 749 (1496)
++||+|+| .+++.|++|||.|+.. .+. ++..++++.++|.+++ .+.++.+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCHHHHH
Confidence 58999998 5778899999998732 222 2334455555553222 24567899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 750 RIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|++|||||+.+|+++||||||++||+.+...+.+. ++.+ . .|.|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~-L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEM-FYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999998888754 4444 3 38999999999999865 9999999999999999998
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
++.+.
T Consensus 232 ~~~~~ 236 (290)
T PRK13634 232 EIFAD 236 (290)
T ss_pred HHhcC
Confidence 87643
No 343
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=354.14 Aligned_cols=202 Identities=25% Similarity=0.436 Sum_probs=169.2
Q ss_pred EEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 618 LDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
++++|++++|+... .+++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 68999999996321 136999999999999999999999999999999999999999999999873
Q ss_pred ----eEEEccCC--ccCCCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHH
Q 039402 683 ----KAYVAQSP--WIQSGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 749 (1496)
Q Consensus 683 ----~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 749 (1496)
++||+|+| .++..|+.||+.|+.. .+. +++.++++..++.++ ..++...+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~----------~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADE----------FWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hccCCcccCCHHHHH
Confidence 58999998 6888899999998742 222 233444444444222 124667899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 750 RIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
|++|||||+.+|+++||||||++||+.+.+.+.+ ++..+ .+|+|||++||+++++.. ||+|++|++|++++.|++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~-~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQ-LFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999888875 44444 358999999999998864 99999999999999999998
Q ss_pred HHh
Q 039402 828 LIN 830 (1496)
Q Consensus 828 l~~ 830 (1496)
+..
T Consensus 231 ~~~ 233 (288)
T PRK13643 231 VFQ 233 (288)
T ss_pred HHc
Confidence 864
No 344
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.1e-36 Score=336.28 Aligned_cols=185 Identities=26% Similarity=0.349 Sum_probs=164.4
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc--cCCCccEEEECCeeCCCCChHHH-hcc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRI--VEPAAGQILIDGIDISLIGLHDL-RSR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~ep~~G~I~IDG~dI~~i~l~~L-R~~ 1322 (1496)
++++|++++|.. .++|+|+||++++||++||+|++|||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 3599999999999999999999999999999999999 58999999999999998876654 567
Q ss_pred cEEEccccccccc-chhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 039402 1323 LSIIPQDPVMFEG-TVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS 1401 (1496)
Q Consensus 1323 i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~ 1401 (1496)
++|+||+|.+|.+ |+++|++ . ...+||+|||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~------------------------~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR------------------------Y-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHHh------------------------h-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999986 6666550 0 12469999999999999999999
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEccCcchhc--ccCEEEEEeCCeEeEecChhhHh
Q 039402 1402 KILMLDEATASVDTATDNLIQQTLRQHFS-DCTVLTIAHRITSVI--DSDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1402 ~ILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TVI~IAHRl~ti~--~~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
+||+|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+. .||+|++|++|++++.| +.++.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999999988643 789999999999998 59999999999999999 66665
No 345
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=354.06 Aligned_cols=204 Identities=26% Similarity=0.430 Sum_probs=169.4
Q ss_pred cEEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 617 ALDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
.++++|+++.|+... .+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999996322 247999999999999999999999999999999999999999999999872
Q ss_pred ---eEEEccCC--ccCCCcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 683 ---KAYVAQSP--WIQSGKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 683 ---~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
++||+|+| .+++.|++|||.|+.. .+.+ +..++++.+++. +.+..++.+.+||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHH
Confidence 58999998 5678899999998642 2322 233444444442 1123457788999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHH
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~ 827 (1496)
++|||||+.+|+++||||||++||+.+...+.+ ++..+ . .|+|||+|||+++++. .||+|++|++|++++.|+.++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILN-KIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999988875 45444 3 3899999999999875 599999999999999999988
Q ss_pred HHh
Q 039402 828 LIN 830 (1496)
Q Consensus 828 l~~ 830 (1496)
+.+
T Consensus 232 ~~~ 234 (287)
T PRK13637 232 VFK 234 (287)
T ss_pred HHh
Confidence 764
No 346
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.2e-36 Score=362.06 Aligned_cols=202 Identities=35% Similarity=0.420 Sum_probs=171.0
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEE
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~y 685 (1496)
.++++|++++|+ ++.+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|+ ++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 4 YLSIDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 589999999995 356899999999999999999999999999999999999999999999984 699
Q ss_pred EccCCccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 686 VAQSPWIQS-GKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 686 v~Q~~~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
|+|++.+|. .|++|||.|+.. .+. ++.+++++..++. ....+++.+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~-----------~~~~~~~~~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLP-----------GSERKYPGQLSGGQQQRVALARAL 149 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-----------chhhCChhhCCHHHHHHHHHHHHH
Confidence 999999985 699999999743 222 2233333433332 234567789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
+.+|+++|||||||+||+.+..++.+.+.+...+ +.|+|+|||+.+++.. ||+|++|++|++++.|+++++.+..
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999887654433333 8999999999998754 9999999999999999999998653
No 347
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3e-36 Score=345.67 Aligned_cols=222 Identities=20% Similarity=0.342 Sum_probs=183.9
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCee-----CCCCChHH-
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGID-----ISLIGLHD- 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~d-----I~~i~l~~- 1318 (1496)
.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++..+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 5899999999964 358999999999999999999999999999999999999999999999988 77766543
Q ss_pred ---HhcccEEEccccc--c-cccchhhccC----CCCC----CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCC
Q 039402 1319 ---LRSRLSIIPQDPV--M-FEGTVRSNLD----PLEE----STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWS 1384 (1496)
Q Consensus 1319 ---LR~~i~iIpQdp~--L-F~gTIR~NLd----p~~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1384 (1496)
++++++++||+|. + +..|+.+|+. .+.. ..++++.+.+++.++.+ +.......+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~LS 150 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAFS 150 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhcC
Confidence 3467999999985 2 3457888863 1111 12345666666666542 12233456899
Q ss_pred chHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEe
Q 039402 1385 MGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1385 ~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~ 1461 (1496)
+|||||++|||||+++|++|+|||||++||+.+.+.+.+.|++..+ +.|+|+|+|+++.+.. ||++++|++|++++.
T Consensus 151 gG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~ 230 (253)
T TIGR02323 151 GGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVES 230 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988643 7899999999999986 999999999999999
Q ss_pred cChhhHhhcCCcHHHHH
Q 039402 1462 DNPANLLENKSSSFSQL 1478 (1496)
Q Consensus 1462 g~p~~Ll~~~~s~F~~l 1478 (1496)
|+++++..++...|.++
T Consensus 231 ~~~~~~~~~~~~~~~~~ 247 (253)
T TIGR02323 231 GLTDQVLDDPQHPYTQL 247 (253)
T ss_pred CCHHHHhcCCCCHHHHH
Confidence 99999987655555443
No 348
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.8e-36 Score=362.09 Aligned_cols=203 Identities=28% Similarity=0.372 Sum_probs=171.2
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eE
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 684 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~ 684 (1496)
..++++|++++|. ++++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++
T Consensus 13 ~~L~l~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 89 (375)
T PRK09452 13 PLVELRGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVN 89 (375)
T ss_pred ceEEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 3589999999995 357899999999999999999999999999999999999999999999984 69
Q ss_pred EEccCCccCC-CcHHHHhccCCCC---CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHH
Q 039402 685 YVAQSPWIQS-GKIEDNILFGKEM---NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 756 (1496)
Q Consensus 685 yv~Q~~~i~~-~ti~eNI~~g~~~---~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 756 (1496)
||+|++.+|. .||+|||.|+... .+ ++.+++++..++.+. ..++..+|||||||||+||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~p~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEF-----------AQRKPHQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHHHHHH
Confidence 9999999885 5999999997532 22 223344444444332 345668999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 757 LYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
|+.+|+++|||||||+||++....+.+.+.+... .+.|+|+|||+.+++. .||+|++|++|+|++.|+++++.+..
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999998888655443333 3899999999999865 59999999999999999999987653
No 349
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.7e-36 Score=344.35 Aligned_cols=208 Identities=30% Similarity=0.427 Sum_probs=181.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLS 1324 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1324 (1496)
.++++||+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +.+++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 5899999999964 3599999999999999999999999999999999999999999999987 35799
Q ss_pred EEcccccccc---cchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 039402 1325 IIPQDPVMFE---GTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRS 1401 (1496)
Q Consensus 1325 iIpQdp~LF~---gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~ 1401 (1496)
++||+|.++. .|+++|+......+++++.++++.+++.+..... ...||+|||||++||||++++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDAP-----------MQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhCC-----------hhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998765 3899997543345678899999999987665432 3579999999999999999999
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHHHHH
Q 039402 1402 KILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSFSQL 1478 (1496)
Q Consensus 1402 ~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~l 1478 (1496)
++|+|||||++||+.+...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++ ++++.|+++++.+ +..|.++
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~--~~~~~~~ 216 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSL--HPEFISM 216 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhC--CHHHHHH
Confidence 99999999999999999999999987643 7899999999999865 999999965 7999999999874 3445555
Q ss_pred H
Q 039402 1479 V 1479 (1496)
Q Consensus 1479 ~ 1479 (1496)
+
T Consensus 217 ~ 217 (251)
T PRK09544 217 F 217 (251)
T ss_pred h
Confidence 4
No 350
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=343.52 Aligned_cols=198 Identities=31% Similarity=0.446 Sum_probs=165.6
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~yv 686 (1496)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 3 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v 79 (239)
T cd03296 3 IEVRNVSKRFG---DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFV 79 (239)
T ss_pred EEEEeEEEEEC---CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEE
Confidence 78899999995 357999999999999999999999999999999999999999999999873 6899
Q ss_pred ccCCccCC-CcHHHHhccCCCC-------CHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 687 AQSPWIQS-GKIEDNILFGKEM-------NRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 687 ~Q~~~i~~-~ti~eNI~~g~~~-------~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+|+|.++. .|++||+.++... +.+ +..+.++.+++. ....+...+||||||||++||
T Consensus 80 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~la 148 (239)
T cd03296 80 FQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLD-----------WLADRYPAQLSGGQRQRVALA 148 (239)
T ss_pred ecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCCh-----------hhhhcChhhCCHHHHHHHHHH
Confidence 99998875 6999999986421 111 122233333332 233566789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
||++.+|+++||||||++||+++.+.+.+ ++... .+ ++|+|++||+++.+.. ||++++|++|++++.|+.+++.+
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 149 RALAVEPKVLLLDEPFGALDAKVRKELRR-WLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999888865 44444 33 7999999999998765 99999999999999999988764
No 351
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=9.4e-37 Score=313.81 Aligned_cols=193 Identities=25% Similarity=0.378 Sum_probs=167.6
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
|++++++..|.. ++++|+||||+|++||++-|+||||||||||+++|.++..|++|+|.++|.
T Consensus 2 I~f~~V~k~Y~~--g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPG--GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCC--CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 688999999974 477999999999999999999999999999999999999999999999983
Q ss_pred -eEEEccCCccC-CCcHHHHhccCCC---CC----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 -KAYVAQSPWIQ-SGKIEDNILFGKE---MN----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 -~~yv~Q~~~i~-~~ti~eNI~~g~~---~~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
+|+|+|+.-+. ..|+.||+.|... .. +++..++++..+|.+-...+| .+|||||||||+|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 69999999764 5699999999753 22 345556777788877666665 6899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
|||+..+|++||-||||.+|||..+..|++-..+--..|.||+++|||.+.+.. --+++.+++|+++...
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999999986433334569999999999999887 5789999999998653
No 352
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-36 Score=349.66 Aligned_cols=203 Identities=29% Similarity=0.447 Sum_probs=170.3
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|++++|+....+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 488999999996432356999999999999999999999999999999999999999999999883 5
Q ss_pred EEEccCCc--cCCCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 684 AYVAQSPW--IQSGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 684 ~yv~Q~~~--i~~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+|++|+|. ++..|++|||.|+.. .++ ++..++++..++.+. ..+...+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDF-----------KEREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhH-----------hhCCcccCCHHHHHHHHHH
Confidence 89999984 566799999998742 232 234445555555432 2455689999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hC-CcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LS-SKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||++.+|+++||||||++||+.+.+.+.+ ++..+ .+ |+|+|++||+++.+..||+|++|++|+++..|+.+++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIK-TIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999888865 45444 33 8999999999998877999999999999999999887654
No 353
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-36 Score=339.70 Aligned_cols=226 Identities=25% Similarity=0.426 Sum_probs=187.0
Q ss_pred EEEEeEEeEeCCCC--CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC-C----CccEEEECCeeCCCCChHH
Q 039402 1246 IDLLDLQVRYAPQM--PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE-P----AAGQILIDGIDISLIGLHD 1318 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~--~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-p----~~G~I~IDG~dI~~i~l~~ 1318 (1496)
++++|+++.|.... -.+++||||++++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+.+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999997543 368999999999999999999999999999999999997 3 5799999999999999875
Q ss_pred Hh----cccEEEcccccc-ccc--chhhccC----CCCCC-c----HHHHHHHHHHcCCcHH---HHhccCCcccccccC
Q 039402 1319 LR----SRLSIIPQDPVM-FEG--TVRSNLD----PLEES-T----DEQIWEALDKCQLGDE---VRKKEGKLDSKVTEN 1379 (1496)
Q Consensus 1319 LR----~~i~iIpQdp~L-F~g--TIR~NLd----p~~~~-s----d~eI~~aL~~~~L~~~---i~~lp~gLdt~v~e~ 1379 (1496)
+| ++|++|||||.- |+- ||.+-+. -.... + .++..+.|+++++.+- +.+-|
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP---------- 151 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYP---------- 151 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCC----------
Confidence 43 479999999841 221 3333331 11111 1 3457888999988753 23333
Q ss_pred CCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCC
Q 039402 1380 GENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHG 1456 (1496)
Q Consensus 1380 G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G 1456 (1496)
..||||||||+.||-||+.+|++||-||||++||..+.++|.+.|++.- .++|+|+|||++..+.. ||||.||.+|
T Consensus 152 -helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG 230 (316)
T COG0444 152 -HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAG 230 (316)
T ss_pred -cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECc
Confidence 5689999999999999999999999999999999999999999998876 48999999999999987 9999999999
Q ss_pred eEeEecChhhHhhcCCcHHHHHHHHH
Q 039402 1457 LIEEFDNPANLLENKSSSFSQLVAEY 1482 (1496)
Q Consensus 1457 ~IvE~g~p~~Ll~~~~s~F~~l~~~~ 1482 (1496)
+|||.|+.+++++++.--|.+..-.+
T Consensus 231 ~iVE~g~~~~i~~~P~HPYT~~Ll~s 256 (316)
T COG0444 231 RIVEEGPVEEIFKNPKHPYTRGLLNS 256 (316)
T ss_pred EEEEeCCHHHHhcCCCChHHHHHHHh
Confidence 99999999999999887776554433
No 354
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=359.12 Aligned_cols=202 Identities=33% Similarity=0.457 Sum_probs=169.5
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEE
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~y 685 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+ ++|
T Consensus 2 ~L~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFG---RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 378999999995 357999999999999999999999999999999999999999999999883 699
Q ss_pred EccCCccCC-CcHHHHhccCCCC-------CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 686 VAQSPWIQS-GKIEDNILFGKEM-------NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 686 v~Q~~~i~~-~ti~eNI~~g~~~-------~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
|+|++.++. .|++|||.|+... +. ++..+.++..++. ....++..+|||||||||+|
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~LSgGq~QRval 147 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLA-----------HLADRYPAQLSGGQKQRVAL 147 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCc-----------hhhhCChhhCCHHHHHHHHH
Confidence 999999986 5999999997431 21 1223334443332 22346778999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||||+.+|+++|||||||+||+.+...+.+.+.+...+ ++|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 148 ArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 148 ARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999998887654333333 7999999999998765 999999999999999999998765
Q ss_pred C
Q 039402 832 G 832 (1496)
Q Consensus 832 ~ 832 (1496)
.
T Consensus 228 p 228 (353)
T PRK10851 228 P 228 (353)
T ss_pred c
Confidence 3
No 355
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.6e-36 Score=337.14 Aligned_cols=198 Identities=51% Similarity=0.890 Sum_probs=177.3
Q ss_pred EEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC-----------------
Q 039402 619 DIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------------- 681 (1496)
Q Consensus 619 ~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g----------------- 681 (1496)
.+.+++|.|+. ..++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~--~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGS--GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 56788999863 35799999999999999999999999999999999999999999999966
Q ss_pred eeEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCC
Q 039402 682 TKAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDS 761 (1496)
Q Consensus 682 ~~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 761 (1496)
.++|++|+|.+++.|++||+.++.+.+.++.+++++.+++.+.++.+|.|+++..++...+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 26899999999989999999987766666677888999998888889999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHH-HHHHHh-CCcEEEEEccCcCccccCCEEEEEeCCe
Q 039402 762 DIYLFDDPFSAVDAHTGSHLFQE-VLLGLL-SSKTVIYVTHQVEFLPAADLILVMKDGK 818 (1496)
Q Consensus 762 ~illLDep~saLD~~~~~~i~~~-~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~ 818 (1496)
+++||||||++||+.+...+.+. +++... +++|+|++||+.+.+..||++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999998888763 454443 4799999999999988899999999874
No 356
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=352.71 Aligned_cols=203 Identities=24% Similarity=0.393 Sum_probs=167.8
Q ss_pred EEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--------------
Q 039402 618 LDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 681 (1496)
Q Consensus 618 i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g-------------- 681 (1496)
++++|++++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999996321 23699999999999999999999999999999999999999999999864
Q ss_pred -----------------------eeEEEccCC--ccCCCcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhcc
Q 039402 682 -----------------------TKAYVAQSP--WIQSGKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILS 729 (1496)
Q Consensus 682 -----------------------~~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~ 729 (1496)
.++||+|+| .++..|++|||.|+.. .+++ +..++++.++|..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----- 157 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDES----- 157 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh-----
Confidence 158999986 5677899999998742 2322 23344444444321
Q ss_pred CCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCccc-c
Q 039402 730 FGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLP-A 807 (1496)
Q Consensus 730 ~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~ 807 (1496)
..++...+||||||||++|||||+.+|+++||||||++||+.....+.+. +..+ .+|+|||+|||+++++. .
T Consensus 158 -----~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 158 -----YLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEI-FDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -----hhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeeCHHHHHHh
Confidence 23467789999999999999999999999999999999999998888654 4443 45899999999999875 4
Q ss_pred CCEEEEEeCCeEEEecChHHHHhc
Q 039402 808 ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 808 ~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||+|++|++|++++.|+.+++...
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999887653
No 357
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.9e-36 Score=360.59 Aligned_cols=203 Identities=31% Similarity=0.441 Sum_probs=171.3
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCc--cEEEEcCe-----------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS--GTLKLCGT----------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~--G~i~~~g~----------- 682 (1496)
..++++|++++|. ++.+|+|+||++++||+++|+|||||||||||++|+|+.+|++ |+|.++|.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYG---ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEEC---CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 4689999999996 3579999999999999999999999999999999999999999 99999884
Q ss_pred eEEEccCCccCCC-cHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 683 KAYVAQSPWIQSG-KIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 683 ~~yv~Q~~~i~~~-ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
++||+|++.+|.. |++|||.|+.. ..+ ++.+++++..+|.+ ...++..+|||||||||+||
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~-----------~~~~~~~~LSgGq~QRvaLA 149 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGD-----------AAAHLPAQLSGGMQQRIAIA 149 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCc-----------hhhCChhhCCHHHHHHHHHH
Confidence 6999999998854 99999998742 222 22333444444432 23566789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC--CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS--SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|||..+|+++|||||||+||+.....+.+.+.+...+ |.|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 150 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 150 RAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999887654433333 7899999999998765 999999999999999999999765
Q ss_pred C
Q 039402 832 G 832 (1496)
Q Consensus 832 ~ 832 (1496)
.
T Consensus 230 p 230 (362)
T TIGR03258 230 P 230 (362)
T ss_pred c
Confidence 3
No 358
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2e-36 Score=341.01 Aligned_cols=203 Identities=26% Similarity=0.341 Sum_probs=169.4
Q ss_pred EEEEeEEeEeCCC--CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCccEEEECCeeCCCCChHHHh
Q 039402 1246 IDLLDLQVRYAPQ--MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE---PAAGQILIDGIDISLIGLHDLR 1320 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~--~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~LR 1320 (1496)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999765 3679999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cccEEEccccccccc-chhhccCCC---C--CCcHH-----HHHH-HHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1321 SRLSIIPQDPVMFEG-TVRSNLDPL---E--ESTDE-----QIWE-ALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1321 ~~i~iIpQdp~LF~g-TIR~NLdp~---~--~~sd~-----eI~~-aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
++++++||++.+|.+ |+++|+... . ...++ .+.+ .++..++. ........+||+|||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALT-----------RIGGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcch-----------hhhcccccCcCHHHH
Confidence 899999999999988 999999631 1 11111 1122 34444332 222334568999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCc-chh-cccCEEEEEeCCeEeEec
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRI-TSV-IDSDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl-~ti-~~~DrIlVL~~G~IvE~g 1462 (1496)
||++||||++++|+||||||||++||+.+...+.+.|++.. +++|+|+++|++ ..+ ..||+|++|++|++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999999864 468999999998 355 459999999999999875
No 359
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-37 Score=322.23 Aligned_cols=215 Identities=25% Similarity=0.398 Sum_probs=184.7
Q ss_pred ceEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH-Hhcc
Q 039402 1244 GKIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRSR 1322 (1496)
Q Consensus 1244 g~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~ 1322 (1496)
+.+..+|+..+|... .|++|+||++++||.||+.||+||||||.+..+.|++.|++|+|.+||.||+.++.+. -|-.
T Consensus 3 ~~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 467889999999754 5999999999999999999999999999999999999999999999999999999987 5778
Q ss_pred cEEEccccccccc-chhhccCCCCCCcH---------HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 039402 1323 LSIIPQDPVMFEG-TVRSNLDPLEESTD---------EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1392 (1496)
Q Consensus 1323 i~iIpQdp~LF~g-TIR~NLdp~~~~sd---------~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~ 1392 (1496)
|||+||||.+|.+ ||++||...-+..+ +++.+-|+..++... -...|..||||||+|+-
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hl-----------r~~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHL-----------RDSKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHH-----------hcCcccccccchHHHHH
Confidence 9999999999988 99999964322221 223344554444322 22346789999999999
Q ss_pred HHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcc-hhcccCEEEEEeCCeEeEecChhhHhhc
Q 039402 1393 LGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRIT-SVIDSDLVLLLNHGLIEEFDNPANLLEN 1470 (1496)
Q Consensus 1393 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~-ti~~~DrIlVL~~G~IvE~g~p~~Ll~~ 1470 (1496)
|||||..+|+.++||||.|++||.+-..||+.|+..- ++--|++.-|... |+.-|||.+++.+|+|...|+|+++.++
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 9999999999999999999999999999999998764 4678999999985 5566999999999999999999999987
Q ss_pred C
Q 039402 1471 K 1471 (1496)
Q Consensus 1471 ~ 1471 (1496)
+
T Consensus 230 ~ 230 (243)
T COG1137 230 E 230 (243)
T ss_pred h
Confidence 5
No 360
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=335.01 Aligned_cols=190 Identities=24% Similarity=0.293 Sum_probs=162.2
Q ss_pred eEEEEeEEeEeCCC--CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCccEEEECCeeCCCCChHHH
Q 039402 1245 KIDLLDLQVRYAPQ--MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVE---PAAGQILIDGIDISLIGLHDL 1319 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~--~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~L 1319 (1496)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.... ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999753 4579999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcccEEEccccccccc-chhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHc
Q 039402 1320 RSRLSIIPQDPVMFEG-TVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLL 1398 (1496)
Q Consensus 1320 R~~i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALL 1398 (1496)
|++++++||++.+|.+ |+++|+...... . . .+....||+|||||++||||++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~--------------~----~~~~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K--------------G----NEFVRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c--------------c----ccchhhCCHHHHHHHHHHHHHh
Confidence 8899999999988875 999999642110 0 1 2233579999999999999999
Q ss_pred cCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEc-cCcchhc-ccCEEEEEeCCeEeEec
Q 039402 1399 KRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIA-HRITSVI-DSDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1399 r~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IA-HRl~ti~-~~DrIlVL~~G~IvE~g 1462 (1496)
++|+||+|||||+++|+++.+.+.+.|++..+ ++|+|+++ |+.+.+. .||+|++|++|++++.|
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999998654 46766655 5556665 59999999999999865
No 361
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2e-36 Score=343.47 Aligned_cols=203 Identities=23% Similarity=0.336 Sum_probs=165.9
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------e
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 683 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------~ 683 (1496)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 35789999995 356999999999999999999999999999999999999999999999872 6
Q ss_pred EEEccCCccCCC-cHHHHhccCCCCC-------------HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHH
Q 039402 684 AYVAQSPWIQSG-KIEDNILFGKEMN-------------RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 749 (1496)
Q Consensus 684 ~yv~Q~~~i~~~-ti~eNI~~g~~~~-------------~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 749 (1496)
+|++|++.++.. |++||+.++.... .+...+ ...+.++.+ |.....+.+..+|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARE-----RAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHH-----HHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 899999988775 9999998764211 111111 112223333 2233456778899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHH
Q 039402 750 RIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l 828 (1496)
|++||||++.+|+++||||||++||+.+...+++.+.....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999988876443333368999999999999865 999999999999999998887
Q ss_pred Hh
Q 039402 829 IN 830 (1496)
Q Consensus 829 ~~ 830 (1496)
..
T Consensus 231 ~~ 232 (236)
T cd03219 231 RN 232 (236)
T ss_pred cc
Confidence 54
No 362
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2e-36 Score=341.40 Aligned_cols=195 Identities=30% Similarity=0.455 Sum_probs=162.0
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCC-----CCCccEEEEcCe----------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV-----PKISGTLKLCGT---------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~-----~~~~G~i~~~g~---------- 682 (1496)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|.+ +|++|+|.++|.
T Consensus 1 i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYG---DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 46889999985 357999999999999999999999999999999999999 999999999873
Q ss_pred -----eEEEccCCccCCCcHHHHhccCCCC----C----HHHHHHHHHHhchhhHHHhccCCCcccccCC--CCCCChHH
Q 039402 683 -----KAYVAQSPWIQSGKIEDNILFGKEM----N----RERYNAVLDACSLKKDLEILSFGDQTVIGER--GINLSGGQ 747 (1496)
Q Consensus 683 -----~~yv~Q~~~i~~~ti~eNI~~g~~~----~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~--g~~LSGGQ 747 (1496)
++|++|++.+++.|++||+.++... . +++..++++.+++.+.. .++ +.+|||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~~LSgG~ 146 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEV-----------KDRLHALGLSGGQ 146 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHH-----------hccCCcccCCHHH
Confidence 5899999998888999999875321 1 12333444444443322 223 57999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||++||||++.+|+++||||||++||+.+...+++ ++....+.+|+|++||+++++.. ||++++|++|++++.|+.+
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 225 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEE-LIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTE 225 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcc
Confidence 999999999999999999999999999999988875 44444334899999999998765 9999999999999998875
Q ss_pred H
Q 039402 827 D 827 (1496)
Q Consensus 827 ~ 827 (1496)
+
T Consensus 226 ~ 226 (227)
T cd03260 226 Q 226 (227)
T ss_pred c
Confidence 4
No 363
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=334.83 Aligned_cols=216 Identities=27% Similarity=0.416 Sum_probs=190.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCe---eCCCCChHHHhc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI---DISLIGLHDLRS 1321 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~---dI~~i~l~~LR~ 1321 (1496)
.|+++|++..|+.- ++++|||++|+.||.+|+.|+||||||||+++|.|+..|++|+|.+||. |.+++.. -.+
T Consensus 2 ~i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~--~~R 77 (345)
T COG1118 2 SIRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAV--RDR 77 (345)
T ss_pred ceeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccch--hhc
Confidence 37788888888643 5899999999999999999999999999999999999999999999999 8777443 346
Q ss_pred ccEEEccccccccc-chhhccCCCC---------CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1322 RLSIIPQDPVMFEG-TVRSNLDPLE---------ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~g-TIR~NLdp~~---------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
+||+|.|+.-||.- ||++|+...- ...+..+.+-|+.|+|...-...| .+||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHH
Confidence 79999999999865 9999997432 123456777799999987766666 46799999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
+|||||.-.|++|+||||.++||.+-.+.+++-+++.. -++|+++|||+.+.+.. ||||+||++|+|...|+|+|..
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 99999999999999999999999999999999998765 37899999999988876 9999999999999999999999
Q ss_pred hcCCcHH
Q 039402 1469 ENKSSSF 1475 (1496)
Q Consensus 1469 ~~~~s~F 1475 (1496)
..+++.|
T Consensus 227 ~~P~s~f 233 (345)
T COG1118 227 DHPASRF 233 (345)
T ss_pred cCCCccc
Confidence 9998877
No 364
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.3e-36 Score=330.90 Aligned_cols=172 Identities=27% Similarity=0.473 Sum_probs=157.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCCh-HHHhccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL-HDLRSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l-~~LR~~i 1323 (1496)
.|+++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999999 8999999999999999999999999999999999999999999999999988874 4568899
Q ss_pred EEEcccc----cccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1324 SIIPQDP----VMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1324 ~iIpQdp----~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
+++||+| .++..|+++|+..... ||+|||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 3445799999864211 89999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeE
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLI 1458 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~I 1458 (1496)
+|++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999864 47899999999999987 999999999975
No 365
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-36 Score=361.83 Aligned_cols=201 Identities=30% Similarity=0.428 Sum_probs=169.6
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEE
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~y 685 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+ ++|
T Consensus 3 ~l~i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 478999999995 357999999999999999999999999999999999999999999999873 699
Q ss_pred EccCCccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 686 VAQSPWIQS-GKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 686 v~Q~~~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
|+|++.++. .|++|||.|+.. .+. ++..++++.+++.+ .......+|||||||||+|||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-----------~~~~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAH-----------LLDRKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChh-----------hhcCChhhCCHHHHHHHHHHHHH
Confidence 999999885 599999998743 222 23344444444432 23456789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
+.+|+++|||||||+||+.+...+.+.+.+...+ ++|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999998887654333333 8999999999998765 999999999999999999998754
No 366
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.6e-36 Score=333.40 Aligned_cols=182 Identities=27% Similarity=0.417 Sum_probs=161.6
Q ss_pred eEEEEeEEeEeCCC----CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc--CCCccEEEECCeeCCCCChHH
Q 039402 1245 KIDLLDLQVRYAPQ----MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIV--EPAAGQILIDGIDISLIGLHD 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~----~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~ 1318 (1496)
.|+++||+++|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++.. .+
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 246999999999999999999999999999999999999 9999999999999875 36
Q ss_pred HhcccEEEccccccccc-chhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1319 LRSRLSIIPQDPVMFEG-TVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1319 LR~~i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
+|++++++||++.+|.+ |+++|+... . +.. .||+|||||++||||+
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~---------~---~~~---------------------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFA---------A---KLR---------------------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHH---------H---Hhc---------------------cCCHHHHHHHHHHHHH
Confidence 78899999999998875 999998421 0 000 7999999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcc-hhcc-cCEEEEEeCCeEeEec
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRIT-SVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~-ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
+++|++++|||||++||..+.+.+.+.|++.. +++|+|+|+|+++ .+.+ ||+|++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999865 4789999999997 4544 9999999999998764
No 367
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-36 Score=351.38 Aligned_cols=204 Identities=25% Similarity=0.457 Sum_probs=168.0
Q ss_pred cEEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 617 ALDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
.++++|++++|+... .+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 247999999999999999999999999999999999999999999999872
Q ss_pred -----eEEEccCC--ccCCCcHHHHhccCCC---CCHHHH----HHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 -----KAYVAQSP--WIQSGKIEDNILFGKE---MNRERY----NAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 -----~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~~~~----~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++||+|+| .++..|++|||.|+.. .+.++. .+.++.+++.. ...++.+.+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSR----------DVMSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHH
Confidence 58999997 5777899999998742 233222 22333333321 123567889999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCccc-cCCEEEEEeCCeEEEecCh
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKY 825 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~ 825 (1496)
||++|||||+.+|+++||||||++||+.+...+.+ +++.+ . .|+|+|+|||+++++. .||+|++|++|++++.|++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMR-LLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999988865 45443 3 4899999999999876 5999999999999999999
Q ss_pred HHHHhc
Q 039402 826 NDLINS 831 (1496)
Q Consensus 826 ~~l~~~ 831 (1496)
+++.+.
T Consensus 231 ~~~~~~ 236 (286)
T PRK13646 231 KELFKD 236 (286)
T ss_pred HHHHhC
Confidence 887653
No 368
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=337.55 Aligned_cols=192 Identities=33% Similarity=0.447 Sum_probs=158.9
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~yv 686 (1496)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYG---SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeC---CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 36789999995 357999999999999999999999999999999999999999999999873 6899
Q ss_pred ccCCccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHc
Q 039402 687 AQSPWIQS-GKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 758 (1496)
Q Consensus 687 ~Q~~~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1496)
+|++.++. .|++||+.++.. .+. ++..+.++.+++.+ ...+...+||||||||++|||||+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrl~la~al~ 146 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEG-----------LLNRYPHELSGGQQQRVALARALA 146 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhcChhhCCHHHHHHHHHHHHHh
Confidence 99998775 699999987632 122 22333444444432 234566899999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 759 QDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
.+|+++||||||++||+.+...+.+.+..... .++|+|++||+++++.. ||++++|++|++++.|
T Consensus 147 ~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 147 REPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999998888754433333 38999999999998765 9999999999998765
No 369
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-36 Score=347.56 Aligned_cols=208 Identities=26% Similarity=0.357 Sum_probs=176.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHh-ccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLR-SRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR-~~i 1323 (1496)
.|+++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..+ +++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~----~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ----ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH----hhccceE
Confidence 59999999999643 459999999999999999999999999999999999999999999999998752 233 469
Q ss_pred EEEcccccc---cccchhhccCCC--------C---CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 039402 1324 SIIPQDPVM---FEGTVRSNLDPL--------E---ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1389 (1496)
Q Consensus 1324 ~iIpQdp~L---F~gTIR~NLdp~--------~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1389 (1496)
+|+||+|.+ +..++++|+... . ...++++.++++..++.+...+ . ..+||+||||
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~----~~~LSgG~~q 149 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHR-------Q----IGELSGGQKK 149 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcC-------C----cccCCHHHHH
Confidence 999999865 456889987521 0 1123456788899888655432 2 2469999999
Q ss_pred HHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhH
Q 039402 1390 LVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANL 1467 (1496)
Q Consensus 1390 ll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~L 1467 (1496)
|++|||||+++|+||+|||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+++++ +|++++.|+++++
T Consensus 150 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 150 RVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 9999999999999999999999999999999999998864 47899999999998865 9999777 8999999999998
Q ss_pred hh
Q 039402 1468 LE 1469 (1496)
Q Consensus 1468 l~ 1469 (1496)
.+
T Consensus 229 ~~ 230 (272)
T PRK15056 229 FT 230 (272)
T ss_pred cC
Confidence 74
No 370
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=314.81 Aligned_cols=213 Identities=25% Similarity=0.386 Sum_probs=184.5
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
+++.+++.+|.+ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|+|||+|+..-+ ...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcce
Confidence 688999999987 334899999999999999999999999999999999999999999999999998754 678999999
Q ss_pred Eccccccccc-chhhccCCCC---CCcHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 039402 1326 IPQDPVMFEG-TVRSNLDPLE---ESTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1397 (1496)
Q Consensus 1326 IpQdp~LF~g-TIR~NLdp~~---~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARAL 1397 (1496)
++-+.-++.. |.||||..|+ +.++. ++-+.-++.++.+...+ .+ .+||-|+||+++|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~r-------Rv----~~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDR-------RV----GEFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHH-------HH----hhhchhhHHHHHHHHHH
Confidence 9977667755 9999998664 23333 44555555666555433 23 45899999999999999
Q ss_pred ccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEccCcchhc-ccCEEEEEeCCeEeEecChhhHhhcC
Q 039402 1398 LKRSKILMLDEATASVDTATDNLIQQTLRQHFS-DCTVLTIAHRITSVI-DSDLVLLLNHGLIEEFDNPANLLENK 1471 (1496)
Q Consensus 1398 Lr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TVI~IAHRl~ti~-~~DrIlVL~~G~IvE~g~p~~Ll~~~ 1471 (1496)
.++|+|+|||||||+||.-|...+++.|++... +++||.-+|-++.+. -||+|+++.+|+++..|++++|.++.
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 999999999999999999999999999998764 899999999999998 49999999999999999999998753
No 371
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-36 Score=340.04 Aligned_cols=201 Identities=27% Similarity=0.428 Sum_probs=169.9
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSF---GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 478999999985 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCccCCCcHHHHhccCCCC---CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC
Q 039402 684 AYVAQSPWIQSGKIEDNILFGKEM---NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 760 (1496)
Q Consensus 684 ~yv~Q~~~i~~~ti~eNI~~g~~~---~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1496)
+|++|++.++..|++||+.++... ..++..+.++.+++.++. ..+...+||||||||++||||++.+
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHHhcC
Confidence 899999999889999999876432 123444555555553221 2356789999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 761 SDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|+++||||||++||+.+.+.+.+ ++... . .|+|+|++||+++++.. ||+|++|++|++++.|+.+++...
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEE-LIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 99999999999999999888765 44443 3 38999999999999875 999999999999999999888653
No 372
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-36 Score=337.36 Aligned_cols=200 Identities=24% Similarity=0.361 Sum_probs=170.8
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCC----ChHHHhc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLHDLRS 1321 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~~LR~ 1321 (1496)
+++ ||+++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+
T Consensus 2 ~~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 345 899999753 24 99999999 99999999999999999999999999999999999998643 2346788
Q ss_pred ccEEEccccccccc-chhhccCCC-CCC----cHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1322 RLSIIPQDPVMFEG-TVRSNLDPL-EES----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~g-TIR~NLdp~-~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
+++++||++.+|.+ |+++|+... ..+ .++++.+++++.++.+... .....||+|||||++|||
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~ 144 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLLN-----------RYPAQLSGGEKQRVALAR 144 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhh-----------cCcccCCHHHHHHHHHHH
Confidence 99999999999864 999999632 111 2345777888887754433 334679999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
|++++|+||+|||||++||+++.+.+.+.|++..+ ++|+|+|+|+++.+.+ ||+|++|++|++++.|
T Consensus 145 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 145 ALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998643 7899999999999865 9999999999999875
No 373
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.8e-36 Score=340.75 Aligned_cols=206 Identities=25% Similarity=0.347 Sum_probs=172.0
Q ss_pred cceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC----CccEEEECCeeCCCCChHHHhcccEEEccccc-ccc--
Q 039402 1262 VLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP----AAGQILIDGIDISLIGLHDLRSRLSIIPQDPV-MFE-- 1334 (1496)
Q Consensus 1262 vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep----~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~-- 1334 (1496)
+|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++... ...+++++++||+|. .|.
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 223468999999995 343
Q ss_pred cchhhccC-C---CCC---CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEE
Q 039402 1335 GTVRSNLD-P---LEE---STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLD 1407 (1496)
Q Consensus 1335 gTIR~NLd-p---~~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLD 1407 (1496)
-|+.+|+. + ... ..++++.++++++++.+. +........+||+|||||++||||++++|+||+||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 48888863 1 111 123458888999888631 11223345679999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhhcCCcHHHH
Q 039402 1408 EATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLENKSSSFSQ 1477 (1496)
Q Consensus 1408 EaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~~~~s~F~~ 1477 (1496)
|||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|++++++..+...|.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999999998653 6899999999999975 9999999999999999999998765555544
No 374
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-36 Score=338.41 Aligned_cols=197 Identities=20% Similarity=0.326 Sum_probs=163.2
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC------------eeEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TKAY 685 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g------------~~~y 685 (1496)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYG---DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEEC---CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 46889999995 35799999999999999999999999999999999999999999999987 2689
Q ss_pred EccCCccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 686 VAQSPWIQS-GKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 686 v~Q~~~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
++|++.++. .|++||+.++.. .+. ++..+.++.+++.+. ......+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEA-----------ADRLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhCCHHHHHHHHHHHHH
Confidence 999998776 499999987421 221 233444555544322 2345679999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHH
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l 828 (1496)
+.+|+++||||||++||+++...+.+.+.....+ ++|+|++||+++++.. ||++++|++|++++.|+.+++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999988887544333344 7899999999999875 999999999999999887653
No 375
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=3.7e-36 Score=321.98 Aligned_cols=164 Identities=29% Similarity=0.391 Sum_probs=151.2
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+.+ +++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.++|. +++++
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999644 45999999999999999999999999999999999999999999999983 68999
Q ss_pred EcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEE
Q 039402 1326 IPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILM 1405 (1496)
Q Consensus 1326 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILi 1405 (1496)
+||+|.++++|+++|+... ....||+|||||++||||++++|++++
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999999642 236799999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEccCcchhcccCEEEEEeCCe
Q 039402 1406 LDEATASVDTATDNLIQQTLRQHFSDCTVLTIAHRITSVIDSDLVLLLNHGL 1457 (1496)
Q Consensus 1406 LDEaTsslD~~Td~~Iq~~I~~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ 1457 (1496)
|||||+++|+++.+.+.+.|++. ++|+|+++|+++....||+|++|++|-
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99999999999999999999986 689999999999888899999999863
No 376
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.9e-36 Score=337.54 Aligned_cols=190 Identities=25% Similarity=0.408 Sum_probs=157.2
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|++++|+.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6789999999522 246999999999999999999999999999999999999999999999873
Q ss_pred -eEEEccCCccCC-CcHHHHhccCCC---CC----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 -KAYVAQSPWIQS-GKIEDNILFGKE---MN----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 -~~yv~Q~~~i~~-~ti~eNI~~g~~---~~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++|++|++.++. .|++||+.++.. .+ +++..++++.+++.+. ..+...+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGK-----------AHALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHHHH
Confidence 589999998875 599999987521 11 2233444555554322 234567999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeE
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKI 819 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 819 (1496)
|||++.+|+++||||||++||+.+.+.+.+.+.....+++|+|+|||+++++.. ||++++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999988876443333358999999999999875 999999999975
No 377
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.9e-36 Score=351.57 Aligned_cols=201 Identities=24% Similarity=0.412 Sum_probs=168.0
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------e
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------K 683 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------~ 683 (1496)
..++++|+++.|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 4689999999995 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCccCC-CcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHH
Q 039402 684 AYVAQSPWIQS-GKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 755 (1496)
Q Consensus 684 ~yv~Q~~~i~~-~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 755 (1496)
|||||++.++. .|++||+.|... .+.. +..++++.+++.+ ....+..+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLEN-----------KADAKVGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------HhcCchhhCCHHHHHHHHHHH
Confidence 99999998875 699999985321 1222 2223333333321 123456789999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 756 ALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||+++|++++|||||++||+.+.+.+++. +..+ .+|+|+|++||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999988764 5444 358999999999999876 999999999999999999998644
No 378
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=347.29 Aligned_cols=199 Identities=29% Similarity=0.422 Sum_probs=167.1
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|+++.|+. .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5889999999952 356999999999999999999999999999999999999999999999883 6
Q ss_pred EEEccCC--ccCCCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 684 AYVAQSP--WIQSGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 684 ~yv~Q~~--~i~~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+|++|+| .++..|++||+.|+.. .+. +++.++++.+++.+. ......+||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDF-----------RDKPPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCChhhCCHHHHHHHHHH
Confidence 9999998 5778899999998642 222 234445555555432 2345679999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHHH
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~l 828 (1496)
|||+.+|+++||||||++||+.+...+.+.+.....+|+|+|++||+++++. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999998886544333345899999999999985 5999999999999999998654
No 379
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=331.65 Aligned_cols=181 Identities=27% Similarity=0.354 Sum_probs=160.5
Q ss_pred eEEEEeEEeEeCCC--CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc--CCCccEEEECCeeCCCCChHHHh
Q 039402 1245 KIDLLDLQVRYAPQ--MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIV--EPAAGQILIDGIDISLIGLHDLR 1320 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~--~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~LR 1320 (1496)
.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999642 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cccEEEccccccccc-chhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1321 SRLSIIPQDPVMFEG-TVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1321 ~~i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
++++++||+|.+|.+ |+++|+... ..++ +||+|||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 899999999988875 999998621 0000 799999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcch-h-cccCEEEEEeC-CeEeEec
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITS-V-IDSDLVLLLNH-GLIEEFD 1462 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~t-i-~~~DrIlVL~~-G~IvE~g 1462 (1496)
+|++|+|||||+++|+++...+.+.|++.. +++|+|+|+|+++. + ..||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999864 47899999999984 4 56999999999 9999875
No 380
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.2e-36 Score=341.04 Aligned_cols=197 Identities=34% Similarity=0.463 Sum_probs=163.7
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|++++|+ .++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~--~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYP--NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecC--CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 67899999985 1357999999999999999999999999999999999999999999999872
Q ss_pred -eEEEccCCccCC-CcHHHHhccCCCC------------C---HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCCh
Q 039402 683 -KAYVAQSPWIQS-GKIEDNILFGKEM------------N---RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSG 745 (1496)
Q Consensus 683 -~~yv~Q~~~i~~-~ti~eNI~~g~~~------------~---~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 745 (1496)
++|++|++.++. .|++||+.++... . .++..++++.+++. ......+.+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLA-----------DKAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcH-----------hhhcCCcccCCH
Confidence 589999998875 6999999875321 1 11223333333332 233567789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEe
Q 039402 746 GQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQA 822 (1496)
Q Consensus 746 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~ 822 (1496)
|||||++||||++.+|+++||||||++||+.+...+.+ ++... . .++|+|++||+++++.. ||++++|++|++++.
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~ 227 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMD-YLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFD 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 99999999999999999999999999999999888865 44443 3 37999999999999864 999999999999999
Q ss_pred cChHHH
Q 039402 823 GKYNDL 828 (1496)
Q Consensus 823 G~~~~l 828 (1496)
|+++++
T Consensus 228 ~~~~~~ 233 (243)
T TIGR02315 228 GAPSEL 233 (243)
T ss_pred CCHHHh
Confidence 998875
No 381
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-36 Score=337.36 Aligned_cols=197 Identities=35% Similarity=0.465 Sum_probs=161.5
Q ss_pred EEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--------eeEEEcc
Q 039402 618 LDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------TKAYVAQ 688 (1496)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--------~~~yv~Q 688 (1496)
++++|++++|+... .+++|+|+||+|++|++++|+||||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 36789999996311 15799999999999999999999999999999999999999999999987 3699999
Q ss_pred CCccCC-CcHHHHhccCCC---CC----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC
Q 039402 689 SPWIQS-GKIEDNILFGKE---MN----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 760 (1496)
Q Consensus 689 ~~~i~~-~ti~eNI~~g~~---~~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1496)
++.++. .|++||+.++.. .+ .++..+.++.+++.+ ...+...+||||||||++||||++.+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrl~la~al~~~ 149 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSG-----------FENAYPHQLSGGMRQRVALARALAVD 149 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 998876 699999987532 11 123334444444432 23455679999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEe--CCeEEEecCh
Q 039402 761 SDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMK--DGKITQAGKY 825 (1496)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~--~G~i~~~G~~ 825 (1496)
|+++||||||++||+.+...+++.+.+... .++|+|++||+++++.. ||++++|+ +|++++.++.
T Consensus 150 p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 150 PDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999988764433323 48999999999998765 99999999 7999988764
No 382
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-36 Score=343.31 Aligned_cols=205 Identities=27% Similarity=0.421 Sum_probs=170.3
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcC---------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 681 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g--------- 681 (1496)
+.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYG---DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEEC---CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 4689999999995 3579999999999999999999999999999999999864 5899999877
Q ss_pred ------eeEEEccCCccCCCcHHHHhccCCC---C-C----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHH
Q 039402 682 ------TKAYVAQSPWIQSGKIEDNILFGKE---M-N----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 682 ------~~~yv~Q~~~i~~~ti~eNI~~g~~---~-~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 747 (1496)
.++|++|++.+++.|++||+.++.. . . +++.++.++.+++.+.+. +..++.+.+|||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 154 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQ 154 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHH
Confidence 2689999999988899999987631 1 1 123334445444433221 23467788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
||||+||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++.. ||++++|++|++++.|+++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 233 (253)
T PRK14242 155 QQRLCIARALAVEPEVLLMDEPASALDPIATQKIEE-LIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTE 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888865 45555568999999999999865 9999999999999999998
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
++.+.
T Consensus 234 ~~~~~ 238 (253)
T PRK14242 234 QIFTR 238 (253)
T ss_pred HHHcC
Confidence 88643
No 383
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-36 Score=341.13 Aligned_cols=198 Identities=31% Similarity=0.419 Sum_probs=163.1
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|++++|+. ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 367899999852 257999999999999999999999999999999999999999999999872
Q ss_pred -eEEEccCCccCC-CcHHHHhccCCCC------------CH---HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCCh
Q 039402 683 -KAYVAQSPWIQS-GKIEDNILFGKEM------------NR---ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSG 745 (1496)
Q Consensus 683 -~~yv~Q~~~i~~-~ti~eNI~~g~~~------------~~---~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 745 (1496)
++|++|++.++. .|++||+.++... .+ ++..+.++..++ ....+..+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGL-----------LDKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCC-----------hhhhCCCcccCCH
Confidence 689999998776 6999999875321 11 112222333322 2234567889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCccc-cCCEEEEEeCCeEEEec
Q 039402 746 GQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLP-AADLILVMKDGKITQAG 823 (1496)
Q Consensus 746 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G 823 (1496)
|||||++||||++.+|+++||||||++||+.+...+.+.+..... .|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999999999999999888764433333 3899999999999987 59999999999999999
Q ss_pred ChHHH
Q 039402 824 KYNDL 828 (1496)
Q Consensus 824 ~~~~l 828 (1496)
+++++
T Consensus 228 ~~~~~ 232 (241)
T cd03256 228 PPAEL 232 (241)
T ss_pred CHHHh
Confidence 98876
No 384
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.9e-36 Score=333.02 Aligned_cols=192 Identities=26% Similarity=0.362 Sum_probs=162.4
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~yv 686 (1496)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++|. ++|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 46889999995 357999999999999999999999999999999999999999999999873 6899
Q ss_pred ccCCccC-CCcHHHHhccCCC---CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCC
Q 039402 687 AQSPWIQ-SGKIEDNILFGKE---MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSD 762 (1496)
Q Consensus 687 ~Q~~~i~-~~ti~eNI~~g~~---~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1496)
+|++.++ +.|++||+.++.. .++++.+++++..++.+.. .+.+.+||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999877 5799999987532 2344555666666554332 35567999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 763 IYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
++||||||++||+.+.+.+.+.+.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999888875443333358999999999999865 9999999999998765
No 385
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=9.2e-36 Score=335.80 Aligned_cols=204 Identities=28% Similarity=0.456 Sum_probs=174.8
Q ss_pred CccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 615 ETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
...++++++++.|+.....++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 34689999999996432347999999999999999999999999999999999999999999999873
Q ss_pred -eEEEccCCccCCCcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC
Q 039402 683 -KAYVAQSPWIQSGKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 760 (1496)
Q Consensus 683 -~~yv~Q~~~i~~~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1496)
++|++|++.++..|++||+.++.. .....+.+..+...+.+.++.++.|..+..++++.+|||||||||+||||++++
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 699999999998999999998653 222233333344456677888887888888999999999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeE
Q 039402 761 SDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKI 819 (1496)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i 819 (1496)
|+++||||||++||+++...+.+ .+..+.+++|+|++||+++++..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQ-ALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999888865 45555557899999999999877999999999874
No 386
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6e-36 Score=341.84 Aligned_cols=203 Identities=27% Similarity=0.417 Sum_probs=168.8
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCC-----ccEEEEcCe----------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI-----SGTLKLCGT---------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~-----~G~i~~~g~---------- 682 (1496)
++++|++++|+ +.++++|+||+|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYG---EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEEC---CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 68899999996 346999999999999999999999999999999999999998 999998762
Q ss_pred -----eEEEccCCccCCCcHHHHhccCCC----CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHH
Q 039402 683 -----KAYVAQSPWIQSGKIEDNILFGKE----MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 749 (1496)
Q Consensus 683 -----~~yv~Q~~~i~~~ti~eNI~~g~~----~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 749 (1496)
++|++|+++++..|++||+.++.. .+. ++..++++..++.++++ ...+....+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 689999999988999999987532 121 22333444444432221 2345677899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHH
Q 039402 750 RIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l 828 (1496)
|++||||++.+|+++||||||++||+.+...+++ ++....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEE-LIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999888865 55555556899999999998865 999999999999999999887
Q ss_pred Hhc
Q 039402 829 INS 831 (1496)
Q Consensus 829 ~~~ 831 (1496)
...
T Consensus 231 ~~~ 233 (247)
T TIGR00972 231 FTN 233 (247)
T ss_pred HhC
Confidence 643
No 387
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4e-36 Score=333.56 Aligned_cols=187 Identities=31% Similarity=0.508 Sum_probs=157.5
Q ss_pred EEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe----------eEEEccC
Q 039402 620 IVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----------KAYVAQS 689 (1496)
Q Consensus 620 ~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~----------~~yv~Q~ 689 (1496)
++|++++|+. .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|. ++|++|+
T Consensus 2 ~~~l~~~~~~--~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~ 79 (205)
T cd03226 2 IENISFSYKK--GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQD 79 (205)
T ss_pred cccEEEEeCC--cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecC
Confidence 5788888852 157999999999999999999999999999999999999999999999883 6899999
Q ss_pred C--ccCCCcHHHHhccCCCC---CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEE
Q 039402 690 P--WIQSGKIEDNILFGKEM---NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIY 764 (1496)
Q Consensus 690 ~--~i~~~ti~eNI~~g~~~---~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~il 764 (1496)
| .++..|++||+.++... ++++..++++.+++.+. ......+||||||||++||||++.+|+++
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~laral~~~p~ll 148 (205)
T cd03226 80 VDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYAL-----------KERHPLSLSGGQKQRLAIAAALLSGKDLL 148 (205)
T ss_pred hhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchh-----------cCCCchhCCHHHHHHHHHHHHHHhCCCEE
Confidence 7 46678999999886432 23455566666665432 23456799999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEE
Q 039402 765 LFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKIT 820 (1496)
Q Consensus 765 lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 820 (1496)
||||||++||+.+.+.+.+ .+... .+++|+|++||+++.+.. ||++++|++|+++
T Consensus 149 llDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 149 IFDEPTSGLDYKNMERVGE-LIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEeCCCccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999888865 45444 468999999999999875 9999999999874
No 388
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-36 Score=356.04 Aligned_cols=203 Identities=24% Similarity=0.347 Sum_probs=168.2
Q ss_pred EEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 618 LDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
++++|++++|+..+ ++++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 68899999996322 357999999999999999999999999999999999999999999999872
Q ss_pred --eEEEccCCccCC-CcHHHHhccCCC---CCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 --KAYVAQSPWIQS-GKIEDNILFGKE---MNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 --~~yv~Q~~~i~~-~ti~eNI~~g~~---~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
++|++|++.++. .|++||+.++.. .+.+. ..+.++..++. ........+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-----------~~~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLS-----------DKADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-----------hhhhCChhhCCHHHHHHHH
Confidence 699999998875 699999987632 22222 22333333332 2335667899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
|||||+++|+++||||||++||+.+...+.+.+.+... .|+|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999888754433323 38999999999999875 99999999999999999999875
Q ss_pred c
Q 039402 831 S 831 (1496)
Q Consensus 831 ~ 831 (1496)
.
T Consensus 231 ~ 231 (343)
T PRK11153 231 H 231 (343)
T ss_pred C
Confidence 4
No 389
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-36 Score=341.08 Aligned_cols=204 Identities=26% Similarity=0.388 Sum_probs=171.3
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC---CCccEEEEcCe-----------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP---KISGTLKLCGT----------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~---~~~G~i~~~g~----------- 682 (1496)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.
T Consensus 2 ~~~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYG---KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEEC---CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 478899999995 3579999999999999999999999999999999999974 69999999873
Q ss_pred --eEEEccCCccCCCcHHHHhccCCCC---------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 683 --KAYVAQSPWIQSGKIEDNILFGKEM---------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 683 --~~yv~Q~~~i~~~ti~eNI~~g~~~---------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
++|++|++.+++.|++||+.++... .+++..+.++.+++.+.+.. ...+++.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 6999999999999999999876321 11233455666666443321 23567789999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
+||||++++|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+.+++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEE-LLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999888765 55555568999999999998865 99999999999999999988764
Q ss_pred c
Q 039402 831 S 831 (1496)
Q Consensus 831 ~ 831 (1496)
.
T Consensus 231 ~ 231 (246)
T PRK14269 231 N 231 (246)
T ss_pred C
Confidence 3
No 390
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=7.7e-36 Score=342.10 Aligned_cols=212 Identities=22% Similarity=0.291 Sum_probs=178.7
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc--cCCCccEEEECCeeCCCCChHHHhc-
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRI--VEPAAGQILIDGIDISLIGLHDLRS- 1321 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~ep~~G~I~IDG~dI~~i~l~~LR~- 1321 (1496)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++..++.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4999999999964 3599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ccEEEccccccccc-chhhccCCC-C---------CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 039402 1322 RLSIIPQDPVMFEG-TVRSNLDPL-E---------EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1386 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~g-TIR~NLdp~-~---------~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1386 (1496)
.++++||+|.+|.+ |+++|+... . +.+ .+++.++|+.+++.+.. ++..+. ..||+|
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LSgG 155 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSF------LSRNVN---EGFSGG 155 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhh------hccccc---cCCCHH
Confidence 58899999999987 889987421 1 011 13456778887775211 122221 249999
Q ss_pred HHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc--cCEEEEEeCCeEeEecC
Q 039402 1387 QRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID--SDLVLLLNHGLIEEFDN 1463 (1496)
Q Consensus 1387 QrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~--~DrIlVL~~G~IvE~g~ 1463 (1496)
||||++||||++++|+||||||||++||..+...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+
T Consensus 156 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (252)
T CHL00131 156 EKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGD 235 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999999865 47999999999999875 89999999999999999
Q ss_pred hhhH
Q 039402 1464 PANL 1467 (1496)
Q Consensus 1464 p~~L 1467 (1496)
|+.+
T Consensus 236 ~~~~ 239 (252)
T CHL00131 236 AELA 239 (252)
T ss_pred hhhh
Confidence 9844
No 391
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-36 Score=347.09 Aligned_cols=203 Identities=25% Similarity=0.436 Sum_probs=167.6
Q ss_pred cEEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 617 ALDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
.++++|++++|+... .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 257999999999999999999999999999999999999999999999873
Q ss_pred -----eEEEccCC--ccCCCcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 -----KAYVAQSP--WIQSGKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 -----~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|+| .++..|++|||.++.. .+.+ +..++++.+++..+ ....+..+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSED----------LISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhhCCcccCCHHHH
Confidence 58999998 4677899999987532 2222 22334444444211 23466789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
||++||||++.+|+++||||||++||+.+...+.+ ++..+ .+|+|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~-~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQ-LFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999888865 45544 358999999999999865 9999999999999999998
Q ss_pred HHHh
Q 039402 827 DLIN 830 (1496)
Q Consensus 827 ~l~~ 830 (1496)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13641 231 EIFS 234 (287)
T ss_pred HHhc
Confidence 8754
No 392
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=4.5e-36 Score=326.00 Aligned_cols=177 Identities=33% Similarity=0.512 Sum_probs=161.5
Q ss_pred EEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEE
Q 039402 1247 DLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSII 1326 (1496)
Q Consensus 1247 ~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1326 (1496)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++++
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 57899999964 4599999999999999999999999999999999999999999999999999988888889999999
Q ss_pred cccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEE
Q 039402 1327 PQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILML 1406 (1496)
Q Consensus 1327 pQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiL 1406 (1496)
|| +++.+++.+.+.+ .+.+||+|||||++||||++++|+++||
T Consensus 79 ~q--------------------------~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLADR-----------PFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 7888888765543 3467999999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1407 DEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1407 DEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
||||++||+++.+.+.+.|++..+ ++|+|+++|+++.+.+ ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999988754 6899999999999855 9999999999998754
No 393
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-36 Score=356.84 Aligned_cols=203 Identities=29% Similarity=0.425 Sum_probs=170.8
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eE
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 684 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~ 684 (1496)
..++++|++++|. +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++
T Consensus 18 ~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig 94 (377)
T PRK11607 18 PLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPIN 94 (377)
T ss_pred ceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4699999999995 357999999999999999999999999999999999999999999999984 69
Q ss_pred EEccCCccCCC-cHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHH
Q 039402 685 YVAQSPWIQSG-KIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 756 (1496)
Q Consensus 685 yv~Q~~~i~~~-ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 756 (1496)
||+|++.+|.. |+.|||.|+.. .+.. +..+.++..++. .....+..+|||||||||+||||
T Consensus 95 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~-----------~~~~~~~~~LSgGq~QRVaLARA 163 (377)
T PRK11607 95 MMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQ-----------EFAKRKPHQLSGGQRQRVALARS 163 (377)
T ss_pred EEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999865 99999998743 2222 223333333332 22346678999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 757 LYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
|+.+|+++|||||||+||+.....+.+.+.+... .+.|+|+|||+.+++. .||+|++|++|++++.|+++++....
T Consensus 164 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 164 LAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999888765444333 3899999999999865 49999999999999999999987653
No 394
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.2e-36 Score=334.61 Aligned_cols=193 Identities=26% Similarity=0.377 Sum_probs=165.6
Q ss_pred EEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCCh----HHHhccc
Q 039402 1248 LLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL----HDLRSRL 1323 (1496)
Q Consensus 1248 f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l----~~LR~~i 1323 (1496)
++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++.+.. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4689999964 359999999999999999999999999999999999999999999999999875542 2467889
Q ss_pred EEEcccccccc-cchhhccCCC---C----CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 039402 1324 SIIPQDPVMFE-GTVRSNLDPL---E----ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1395 (1496)
Q Consensus 1324 ~iIpQdp~LF~-gTIR~NLdp~---~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LAR 1395 (1496)
+++||+|.+|. .|+++|+... . ...++++.++++..++.+...+ ...+||+|||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQ-----------KIYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 99999999997 6999999631 1 1124567788888887544322 23579999999999999
Q ss_pred HHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcccCEEEEE
Q 039402 1396 VLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVIDSDLVLLL 1453 (1496)
Q Consensus 1396 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~~DrIlVL 1453 (1496)
||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+++|+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999999865 378999999999988889999986
No 395
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.1e-36 Score=334.96 Aligned_cols=199 Identities=27% Similarity=0.426 Sum_probs=163.0
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------e
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 683 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------~ 683 (1496)
++++|++++|+ ++++++|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYG---KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecC---CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 46789999985 357999999999999999999999999999999999999999999999872 6
Q ss_pred EEEccCCccCCC-cHHHHhccCCCCC--H---HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 684 AYVAQSPWIQSG-KIEDNILFGKEMN--R---ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 684 ~yv~Q~~~i~~~-ti~eNI~~g~~~~--~---~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
+|++|++.++.. |++||+.++.... . ++..++++.. ..+ ....+.++.+||||||||++||||+
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~------~~l----~~~~~~~~~~LS~G~~qrv~laral 147 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELF------PRL----KERRKQLAGTLSGGEQQMLAIARAL 147 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHH------Hhh----hhhhhCchhhCCHHHHHHHHHHHHH
Confidence 899999988775 9999998864321 1 1112222222 111 1223567789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHH
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLI 829 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~ 829 (1496)
+.+|+++||||||++||+.+...+.+.+.....+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 148 MSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999888875443333358999999999998765 9999999999999999887764
No 396
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.8e-35 Score=328.74 Aligned_cols=189 Identities=24% Similarity=0.421 Sum_probs=162.7
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
..+++++++++|+.. .+++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999632 247999999999999999999999999999999999999999999999873
Q ss_pred eEEEccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCC
Q 039402 683 KAYVAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSD 762 (1496)
Q Consensus 683 ~~yv~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1496)
++||+|+|.++++|++||+.+...++.++.. +.+. +++++.+||||||||++||||++.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~---~~l~---------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSDEEIY---GALR---------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCHHHHH---HHhh---------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 6999999999999999999876544433222 2211 356788999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecC
Q 039402 763 IYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGK 824 (1496)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~ 824 (1496)
++||||||++||+.+...+.+ .++...+++|+|++||+++.+..||++++|++|++.+.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQK-TIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 999999999999999887765 4555556899999999999987799999999999998775
No 397
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.9e-36 Score=334.99 Aligned_cols=198 Identities=26% Similarity=0.449 Sum_probs=165.1
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------eEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 685 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------~~y 685 (1496)
++++|+++.|+.. .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4678999998521 257999999999999999999999999999999999999999999999874 589
Q ss_pred EccCCccC-CCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 686 VAQSPWIQ-SGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 686 v~Q~~~i~-~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
++|++.++ ..|++||+.++.. ... ++..++++.+++.+. .+....+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDK-----------ANKRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhChhhhCCHHHHHHHHHHHHH
Confidence 99999887 5799999987421 221 233444555544322 2345678999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHH
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l 828 (1496)
+.+|+++||||||++||+.+.+.+.+ .+....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWD-LILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHH-HHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999888865 45555557999999999999875 999999999999999988764
No 398
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5.9e-36 Score=335.50 Aligned_cols=190 Identities=32% Similarity=0.455 Sum_probs=156.3
Q ss_pred EEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC---------------
Q 039402 618 LDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1496)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--------------- 681 (1496)
++++|++++|+... .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46789999996321 15799999999999999999999999999999999999999999999876
Q ss_pred --eeEEEccCCccCCC-cHHHHhccCCCC---CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 682 --TKAYVAQSPWIQSG-KIEDNILFGKEM---NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 682 --~~~yv~Q~~~i~~~-ti~eNI~~g~~~---~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
.++|++|++.++.. |++||+.++... +. ++..++++..++. ....+...+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLG-----------DRLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCc-----------hhhhcChhhcCHHHHHHH
Confidence 26899999988875 999999886431 11 2233334443332 233566789999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCccccCCEEEEEeCCeE
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPAADLILVMKDGKI 819 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i 819 (1496)
+||||++.+|+++||||||++||+.+...+.+ ++... . .++|+|++||+++.+..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVME-LLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999888865 44444 3 38999999999998878999999999974
No 399
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=343.42 Aligned_cols=202 Identities=30% Similarity=0.470 Sum_probs=170.4
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|+++.|+. ..+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|. +
T Consensus 5 ~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 5899999999952 2357999999999999999999999999999999999999999999999883 5
Q ss_pred EEEccCC--ccCCCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 684 AYVAQSP--WIQSGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 684 ~yv~Q~~--~i~~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+|++|+| .+++.|++|||.++.. .+. ++..++++.++|.+.+ .....+||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFL-----------NREPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhh-----------hCCcccCCHHHHHHHHHH
Confidence 8999998 4667899999988632 222 2344455555554333 355679999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-C-CcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-S-SKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||++.+|+++||||||++||+.+...+++. +..+. + ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLET-VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999888754 44443 3 8999999999998878999999999999999999887653
No 400
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=340.37 Aligned_cols=204 Identities=26% Similarity=0.398 Sum_probs=169.5
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g~--------- 682 (1496)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYT---DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeC---CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 689999999995 35799999999999999999999999999999999999987 5899998762
Q ss_pred ------eEEEccCCccCCCcHHHHhccCCCC----CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 ------KAYVAQSPWIQSGKIEDNILFGKEM----NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~ti~eNI~~g~~~----~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|++.+++.|++|||.++... +. ++..++++.+++.+.+. .....++.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCCHHHH
Confidence 5899999999889999999986421 21 22233444444422111 123457789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||+|++|++|++++.|++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEE-LIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999988875 55555567999999999999765 99999999999999999998
Q ss_pred HHhc
Q 039402 828 LINS 831 (1496)
Q Consensus 828 l~~~ 831 (1496)
+.++
T Consensus 236 ~~~~ 239 (254)
T PRK14273 236 LFFN 239 (254)
T ss_pred HHhC
Confidence 8654
No 401
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=343.24 Aligned_cols=200 Identities=29% Similarity=0.446 Sum_probs=166.9
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------e
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 683 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------~ 683 (1496)
++++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 678999999952 356999999999999999999999999999999999999999999999873 5
Q ss_pred EEEccCCc--cCCCcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 684 AYVAQSPW--IQSGKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 684 ~yv~Q~~~--i~~~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+|++|+|. +++.|++|||.++.. .+.+ +..++++.+++.. .....+.+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEK-----------YRHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHH-----------HhcCCcccCCHHHHHHHHHH
Confidence 89999986 467899999988642 2222 2333344444432 23556789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHh
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
||++.+|+++||||||++||+.+...+++.+.....+|+|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999988887644332335899999999999987799999999999999999988754
No 402
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.1e-36 Score=333.64 Aligned_cols=189 Identities=31% Similarity=0.495 Sum_probs=155.8
Q ss_pred EEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------eEEEccCCc
Q 039402 620 IVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVAQSPW 691 (1496)
Q Consensus 620 ~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------~~yv~Q~~~ 691 (1496)
++|++++|+ ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|++|++.
T Consensus 2 ~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~ 78 (213)
T cd03235 2 VEDLTVSYG---GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRS 78 (213)
T ss_pred cccceeEEC---CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccc
Confidence 578888885 256999999999999999999999999999999999999999999999984 799999987
Q ss_pred c---CCCcHHHHhccCCCC-----------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 692 I---QSGKIEDNILFGKEM-----------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 692 i---~~~ti~eNI~~g~~~-----------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
+ ++.|++||+.++... .+++.+++++.+++.+.. .....+||||||||++||||+
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al 147 (213)
T cd03235 79 IDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELA-----------DRQIGELSGGQQQRVLLARAL 147 (213)
T ss_pred cccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHHHHHHHH
Confidence 6 457999999876421 122344455555554322 345679999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
+.+|+++||||||++||+.+...+.+.+.+...+++|+|++||+++++.. ||++++|++| +++.|
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 148 VQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999988876443333368999999999999865 9999999886 55543
No 403
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.4e-35 Score=336.48 Aligned_cols=203 Identities=24% Similarity=0.411 Sum_probs=166.7
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------eEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 685 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------~~y 685 (1496)
++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|. ++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 67899999995 357999999999999999999999999999999999999999999999873 689
Q ss_pred EccCCcc-CCCcHHHHhccCCC---CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCC
Q 039402 686 VAQSPWI-QSGKIEDNILFGKE---MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDS 761 (1496)
Q Consensus 686 v~Q~~~i-~~~ti~eNI~~g~~---~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 761 (1496)
++|++.+ +..|++||+.++.. ...+...+. ..+.++.+ |.....++++.+||||||||++||||++.+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p 151 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARER-----IAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRP 151 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999987 56799999987532 222211111 11112222 2233356778899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHHh--CCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhc
Q 039402 762 DIYLFDDPFSAVDAHTGSHLFQEVLLGLL--SSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 762 ~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
+++||||||++||+.+...+.+. +..+. +++|+|++||+++.+..||++++|++|++++.|+.+++.++
T Consensus 152 ~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 152 ALLLLDEPTVGLDPASRAAIVAH-VRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CEEEEcCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999988764 44443 48999999999999878999999999999999998887654
No 404
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=9.8e-36 Score=339.81 Aligned_cols=206 Identities=24% Similarity=0.336 Sum_probs=176.4
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++||+++ .+|+|+||+|++||++||+|+||||||||+++|.|+++ .+|+|.+||.++...+..++|+.+++
T Consensus 1 ~~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~ 73 (248)
T PRK03695 1 MQLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAY 73 (248)
T ss_pred Ccccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEE
Confidence 356788875 27999999999999999999999999999999999985 59999999999998888888889999
Q ss_pred Eccccc-ccccchhhccCCCCC-C-c----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHc
Q 039402 1326 IPQDPV-MFEGTVRSNLDPLEE-S-T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLL 1398 (1496)
Q Consensus 1326 IpQdp~-LF~gTIR~NLdp~~~-~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALL 1398 (1496)
+||+|. .+..|+++|+..... . + ++++.++++..++.+...+ ....||+|||||++||||++
T Consensus 74 v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~ 142 (248)
T PRK03695 74 LSQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEALGLDDKLGR-----------SVNQLSGGEWQRVRLAAVVL 142 (248)
T ss_pred ecccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHh
Confidence 999985 456799999974321 1 1 3456777888777544322 34579999999999999999
Q ss_pred c-------CCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1399 K-------RSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1399 r-------~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
+ +|++|||||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 143 ~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 143 QVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred ccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 7 679999999999999999999999998865 46899999999998765 99999999999999999999874
No 405
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=338.53 Aligned_cols=196 Identities=31% Similarity=0.380 Sum_probs=165.4
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------eEEEc
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVA 687 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------~~yv~ 687 (1496)
..++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|. ++|++
T Consensus 11 ~~l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 11 TPLLLNAVSKRYG---ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CcEEEEEEEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 3589999999995 357999999999999999999999999999999999999999999999873 69999
Q ss_pred cCCccCC-CcHHHHhccCCCC-CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEE
Q 039402 688 QSPWIQS-GKIEDNILFGKEM-NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYL 765 (1496)
Q Consensus 688 Q~~~i~~-~ti~eNI~~g~~~-~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ill 765 (1496)
|++.++. .|++||+.++... .+++..+.++..++.+ ..++.+.+||||||||++||||++.+|+++|
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLAD-----------RANEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred cCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChh-----------HhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9998876 6999999886421 2334445555555432 2356678999999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 766 FDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 766 LDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||||++||+.+...+.+. +..+ . .++|+|++||+++++.. ||+|++|++|++++.|+.+
T Consensus 157 LDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDL-IESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EeCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999998888654 4443 3 47999999999998765 9999999999999888653
No 406
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1e-35 Score=336.86 Aligned_cols=202 Identities=25% Similarity=0.376 Sum_probs=164.4
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------e
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 683 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------~ 683 (1496)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 46789999995 357999999999999999999999999999999999999999999999873 5
Q ss_pred EEEccCCccCCC-cHHHHhccCCC---CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHcc
Q 039402 684 AYVAQSPWIQSG-KIEDNILFGKE---MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQ 759 (1496)
Q Consensus 684 ~yv~Q~~~i~~~-ti~eNI~~g~~---~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~ 759 (1496)
+|++|++.++.. |++||+.++.+ ...+...+. +.+.++.+ |.....++...+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEK-----LEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 899999988775 99999987532 111111111 11122222 22233467778999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 760 DSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 760 ~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
+|+++||||||++||+.+.+.+.+ +++.. .+++|+|++||+++.+.. ||++++|++|++++.|+.+++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQK-IIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999888875 44443 358999999999988765 99999999999999999887753
No 407
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-35 Score=356.87 Aligned_cols=200 Identities=24% Similarity=0.434 Sum_probs=169.7
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 478999999995 467999999999999999999999999999999999999999999999883 6
Q ss_pred EEEccCCcc-CCCcHHHHhccCCC-----C---C---HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 684 AYVAQSPWI-QSGKIEDNILFGKE-----M---N---RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 684 ~yv~Q~~~i-~~~ti~eNI~~g~~-----~---~---~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
+||+|++.+ ++.|++||+.++.. + . .++.+++++..++.+. ......+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~-----------~~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQF-----------ADRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHH
Confidence 999999987 57899999988742 1 1 2233444454444322 2456789999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHH
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLI 829 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~ 829 (1496)
+|||||+++|+++||||||++||+.+...+.+ +++.+ .+++|+|++||+++.+.. ||++++|++|++++.|++++++
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~-lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLE-LVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999888865 44444 358999999999999865 9999999999999999999987
Q ss_pred hc
Q 039402 830 NS 831 (1496)
Q Consensus 830 ~~ 831 (1496)
..
T Consensus 228 ~~ 229 (402)
T PRK09536 228 TA 229 (402)
T ss_pred Cc
Confidence 54
No 408
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=335.90 Aligned_cols=196 Identities=27% Similarity=0.379 Sum_probs=162.4
Q ss_pred cEEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--------------
Q 039402 617 ALDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 681 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g-------------- 681 (1496)
.++++|+++.|+... .+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 488999999996322 24799999999999999999999999999999999999999999999987
Q ss_pred ---eeEEEccCCccCCC-cHHHHhccCC---CCCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 682 ---TKAYVAQSPWIQSG-KIEDNILFGK---EMNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 682 ---~~~yv~Q~~~i~~~-ti~eNI~~g~---~~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
.++|++|++.++.. |++||+.++. ..+. ++..++++.+++. ...++...+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLE-----------HRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCc-----------hhhhCChhhCCHHHHHH
Confidence 26899999988764 9999998742 1222 2233344444332 23356678999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCccccCCEEEEEeCCeEEEecC
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPAADLILVMKDGKITQAGK 824 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~ 824 (1496)
++||||++.+|+++||||||++||+.+...+.+ ++... . +|+|+|++||+++++..+|++++|++|++++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQ-LLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999888865 44443 3 4899999999999988888999999999998775
No 409
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=336.34 Aligned_cols=202 Identities=27% Similarity=0.397 Sum_probs=165.0
Q ss_pred EEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 618 LDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
++++|++++|+... .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 67899999996311 127999999999999999999999999999999999999999999998863
Q ss_pred --eEEEccCCccCC-CcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 --KAYVAQSPWIQS-GKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 --~~yv~Q~~~i~~-~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
++|++|++.++. .|++||+.++.. .+.. +..+.++..++. ........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLE-----------DKADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-----------hhhhcChhhCCHHHHHHHH
Confidence 589999999886 699999987532 2221 222233333332 2334567899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
||||++.+|+++||||||++||+.+...+.+.+.....+ ++|+|++||+++.+.. ||++++|++|++++.|+.+++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999988886544333333 8999999999999865 99999999999999999887653
No 410
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=9.1e-36 Score=332.78 Aligned_cols=192 Identities=30% Similarity=0.447 Sum_probs=159.0
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~yv 686 (1496)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFG---NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEEC---CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 46789999985 357999999999999999999999999999999999999999999999873 6899
Q ss_pred ccCCccCC-CcHHHHhccCCC---CCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHc
Q 039402 687 AQSPWIQS-GKIEDNILFGKE---MNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 758 (1496)
Q Consensus 687 ~Q~~~i~~-~ti~eNI~~g~~---~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1496)
+|++.++. .|++||+.++.. .+.+. ..+.++..++. ....+...+||||||||++||||++
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qr~~laral~ 146 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIE-----------HLLDRKPKQLSGGQRQRVALGRAIV 146 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-----------HHHhCChhhCCHHHHHHHHHHHHHh
Confidence 99999875 699999987532 22222 22333333332 2235667899999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 759 QDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
.+|+++||||||++||+++.+.+.+.+.+... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 147 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 147 REPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999888764433333 38999999999998765 9999999999998865
No 411
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=344.40 Aligned_cols=201 Identities=25% Similarity=0.444 Sum_probs=169.6
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.++++|+++.|+ +++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~--~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYS--DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeC--CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 589999999995 2357999999999999999999999999999999999999999999999873
Q ss_pred -eEEEccCC--ccCCCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 683 -KAYVAQSP--WIQSGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 683 -~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
++|++|+| .+++.|++||+.++.. +.. ++..++++.+++.. ...+.+.+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHHHHHHHH
Confidence 58999998 5678899999987532 222 23344455555532 235678899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hC-CcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHHHH
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LS-SKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDLI 829 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~l~ 829 (1496)
|||||+.+|+++||||||++||+.+...+.+. +..+ .+ |+|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL-LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999998888654 4444 33 899999999999987 59999999999999999999886
Q ss_pred hc
Q 039402 830 NS 831 (1496)
Q Consensus 830 ~~ 831 (1496)
..
T Consensus 231 ~~ 232 (283)
T PRK13636 231 AE 232 (283)
T ss_pred cC
Confidence 53
No 412
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.6e-35 Score=347.68 Aligned_cols=202 Identities=25% Similarity=0.415 Sum_probs=166.9
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------e
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------K 683 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------~ 683 (1496)
..++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|.++|++|+|.++|. +
T Consensus 3 ~~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 3589999999995 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCccCC-CcHHHHhccC-C--CCCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHH
Q 039402 684 AYVAQSPWIQS-GKIEDNILFG-K--EMNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 755 (1496)
Q Consensus 684 ~yv~Q~~~i~~-~ti~eNI~~g-~--~~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 755 (1496)
+|++|++.++. .|++||+.+. . ..+.+. ..+.++.+++. .....+..+||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~-----------~~~~~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-----------SKADVRVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-----------hHhcCchhhCCHHHHHHHHHHH
Confidence 99999998874 6999999752 1 122221 22233333332 1234566799999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 756 ALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|++.+|+++||||||++||+.+...+.+.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+++++...
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999988876443333458999999999999865 999999999999999999888643
No 413
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.7e-35 Score=350.32 Aligned_cols=203 Identities=25% Similarity=0.423 Sum_probs=168.2
Q ss_pred CccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 615 ETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
...++++|++++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 39 ~~~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 39 TVAIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred ceeEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 34699999999995 357999999999999999999999999999999999999999999999883
Q ss_pred eEEEccCCccC-CCcHHHHhcc-CC--CCCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 683 KAYVAQSPWIQ-SGKIEDNILF-GK--EMNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 683 ~~yv~Q~~~i~-~~ti~eNI~~-g~--~~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
++|+||++.++ ..|++||+.+ +. ..+.+ +.+++++.+++.+ ...++..+||||||||++||
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-----------~~~~~~~~LS~G~kqrv~lA 184 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-----------KADARVSDLSGGMKRRLTLA 184 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhCCChhhCCHHHHHHHHHH
Confidence 69999999886 5699999975 22 12222 2222333333321 22456679999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|||+++|+++||||||++||+.+...+++.+.+...+|+|||++||+++.+.. ||+|++|++|+++..|+.+++.+.
T Consensus 185 ~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 185 RALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999998876543333458999999999999875 999999999999999999998653
No 414
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-35 Score=340.53 Aligned_cols=205 Identities=25% Similarity=0.398 Sum_probs=170.7
Q ss_pred CccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcCe-------
Q 039402 615 ETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT------- 682 (1496)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g~------- 682 (1496)
+..++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 17 ~~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 45799999999995 35799999999999999999999999999999999999974 8999998872
Q ss_pred --------eEEEccCCccCCCcHHHHhccCCC---C--C----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCCh
Q 039402 683 --------KAYVAQSPWIQSGKIEDNILFGKE---M--N----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSG 745 (1496)
Q Consensus 683 --------~~yv~Q~~~i~~~ti~eNI~~g~~---~--~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 745 (1496)
++|++|+|.++..|++||+.++.. . . .++..++++.+++.+++. +..++.+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 589999999988899999987531 1 1 122334455545433221 233567889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecC
Q 039402 746 GQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGK 824 (1496)
Q Consensus 746 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~ 824 (1496)
|||||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEE-LIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999888764 55555557899999999999865 99999999999999999
Q ss_pred hHHHHh
Q 039402 825 YNDLIN 830 (1496)
Q Consensus 825 ~~~l~~ 830 (1496)
.+++..
T Consensus 246 ~~~~~~ 251 (267)
T PRK14235 246 TEKMFT 251 (267)
T ss_pred HHHHHh
Confidence 988764
No 415
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=9.3e-35 Score=331.34 Aligned_cols=176 Identities=24% Similarity=0.357 Sum_probs=133.1
Q ss_pred EeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccc-cccccchhhccCCCC--
Q 039402 1269 TFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDP-VMFEGTVRSNLDPLE-- 1345 (1496)
Q Consensus 1269 ~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~gTIR~NLdp~~-- 1345 (1496)
+|..||.+||+||+|-||||++++|.|.++|++|+ ..+ -+++|=||-- .-|+|||++-|.-..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45678999999999999999999999999999998 222 3588999953 348999988774211
Q ss_pred CCcHHHHH-HHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHH
Q 039402 1346 ESTDEQIW-EALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQT 1424 (1496)
Q Consensus 1346 ~~sd~eI~-~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~ 1424 (1496)
.+.+.-.+ +..+ |-.|+-.+...-.+|||||.||+++|-||.|++++.+||||+|.||.+..-.+-++
T Consensus 429 ~~~~s~~~~ei~~-----------pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakv 497 (591)
T COG1245 429 AFGSSYFKTEIVK-----------PLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKV 497 (591)
T ss_pred hcccchhHHhhcC-----------ccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHH
Confidence 12222111 1222 33333334444467999999999999999999999999999999999999999999
Q ss_pred HHHhc--CCcEEEEEccCcchhcc-cCEEEEEeC--CeEeEecChhhHhh
Q 039402 1425 LRQHF--SDCTVLTIAHRITSVID-SDLVLLLNH--GLIEEFDNPANLLE 1469 (1496)
Q Consensus 1425 I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~--G~IvE~g~p~~Ll~ 1469 (1496)
||+.. .++|.++|-|++-.+.. +||++|++. |+=-.-..|..+.+
T Consensus 498 IRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr~ 547 (591)
T COG1245 498 IRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMRE 547 (591)
T ss_pred HHHHHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHHH
Confidence 99854 57899999999998876 999999974 32222345666653
No 416
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=338.92 Aligned_cols=205 Identities=29% Similarity=0.426 Sum_probs=170.4
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcC---------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 681 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g--------- 681 (1496)
..++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 12 ~~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYG---KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeC---CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 3589999999995 3479999999999999999999999999999999999986 5899999876
Q ss_pred ------eeEEEccCCccCCCcHHHHhccCCC----CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHH
Q 039402 682 ------TKAYVAQSPWIQSGKIEDNILFGKE----MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 682 ------~~~yv~Q~~~i~~~ti~eNI~~g~~----~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 747 (1496)
.++|++|++.++..|++||+.++.. .+. ++..++++..++.+++. ...++...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHHH
Confidence 2689999999888999999987632 222 23334444444432221 23467788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||++||||++.+|+++||||||++||+.+...+.+ .+....+++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEE-LITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888765 45544567899999999998865 9999999999999999998
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
++...
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 87643
No 417
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=343.39 Aligned_cols=197 Identities=32% Similarity=0.450 Sum_probs=162.8
Q ss_pred EEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC-----------------e
Q 039402 620 IVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-----------------T 682 (1496)
Q Consensus 620 ~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g-----------------~ 682 (1496)
++++++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 27 ~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 27 KEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 456666664 35789999999999999999999999999999999999999999999876 2
Q ss_pred eEEEccCCccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
++|++|++.++. .|++||+.++.. .+. ++..++++.+++.+. ......+||||||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGW-----------EHKYPDELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhCCcccCCHHHHHHHHHH
Confidence 689999999874 699999987531 222 233444555554332 3455678999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||++.+|+++||||||++||+.+.+.+.+. +..+ . .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDE-LLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999998888754 4443 3 38999999999998765 999999999999999999888654
No 418
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.8e-35 Score=355.22 Aligned_cols=228 Identities=27% Similarity=0.416 Sum_probs=193.2
Q ss_pred eEEEEeEEeEeCCCCC--ccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCC----ccEEEECCeeCCCCChHH
Q 039402 1245 KIDLLDLQVRYAPQMP--LVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPA----AGQILIDGIDISLIGLHD 1318 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~--~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~----~G~I~IDG~dI~~i~l~~ 1318 (1496)
-++++|+++.|..... .+++||||+|.+||.+||||.|||||||++++|.|+.++. +|+|..||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975432 5999999999999999999999999999999999999987 899999999999998766
Q ss_pred Hh----cccEEEccccc-cccc--chhhccCC----CC----CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 039402 1319 LR----SRLSIIPQDPV-MFEG--TVRSNLDP----LE----ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1383 (1496)
Q Consensus 1319 LR----~~i~iIpQdp~-LF~g--TIR~NLdp----~~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1383 (1496)
.| ++|++|||||. .++- ||.+-+.- .. +...++..+.|+++++.+-... ..-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 53 57999999995 5544 66555531 11 1123567888999998765543 1123578
Q ss_pred CchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcchhcc-cCEEEEEeCCeEeE
Q 039402 1384 SMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITSVID-SDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1384 S~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE 1460 (1496)
|||||||+.||+||..+|++||+||||.+||+.|.++|.+.|++.. .+.++|+|||++..+.+ ||||+||.+|++||
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999866 57899999999999988 99999999999999
Q ss_pred ecChhhHhhcCCcHHHHHHHH
Q 039402 1461 FDNPANLLENKSSSFSQLVAE 1481 (1496)
Q Consensus 1461 ~g~p~~Ll~~~~s~F~~l~~~ 1481 (1496)
.|+++++++++...|.+..-+
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~ 256 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLA 256 (539)
T ss_pred ecCHHHHHhccCCcccHHHHh
Confidence 999999999887767655433
No 419
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.4e-35 Score=335.42 Aligned_cols=199 Identities=30% Similarity=0.451 Sum_probs=165.8
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|+++.|+ ++++++|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 67899999995 357999999999999999999999999999999999999999999999872
Q ss_pred eEEEccCCccCC-CcHHHHhccCCC----CCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKE----MNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~----~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++|++|++.++. .|++||+.++.. .+.+. ..++++..++ ......+..+||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGL-----------AERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hHHHhcChhhcCHHHHHHHHH
Confidence 589999998875 699999987631 22222 2223333222 233456678999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|||++.+|++++|||||++||+++...+.+ ++..+ .+++|+|++||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLK-VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999888875 45444 358999999999999875 999999999999999999887643
No 420
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.6e-35 Score=331.93 Aligned_cols=195 Identities=19% Similarity=0.300 Sum_probs=159.6
Q ss_pred EEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------eE
Q 039402 618 LDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KA 684 (1496)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------~~ 684 (1496)
++++|++++|+... ..++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 67899999996321 127999999999999999999999999999999999999999999999873 68
Q ss_pred EEccCCccCCC-cHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHH
Q 039402 685 YVAQSPWIQSG-KIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 756 (1496)
Q Consensus 685 yv~Q~~~i~~~-ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 756 (1496)
|++|++.++.. |++||+.+... .+. ++..+.++..++. ....+.+.+||||||||++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~lara 150 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGME-----------ELLDRRVGGFSTGMRQKVAIARA 150 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-----------HHHhhhhhhcCHHHHHHHHHHHH
Confidence 99999988874 99999976421 121 2233344444432 23456778999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 757 LYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
++.+|+++||||||++||+.+.+.+.+.+.....+++|+|++||+++++.. ||++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999888875443333458999999999998765 9999999999998754
No 421
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=343.45 Aligned_cols=203 Identities=24% Similarity=0.419 Sum_probs=166.0
Q ss_pred EEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 618 LDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
++++|++++|+... .+++|+|+||+|++|++++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78899999996321 146999999999999999999999999999999999999999999999872
Q ss_pred ----eEEEccCC--ccCCCcHHHHhccCCC---CCHHHH----HHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHH
Q 039402 683 ----KAYVAQSP--WIQSGKIEDNILFGKE---MNRERY----NAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 749 (1496)
Q Consensus 683 ----~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~~~~----~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 749 (1496)
++|++|++ .+++.|++|||.++.. .+.+.. +++++..++.+ .....+..+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 58999998 5778899999987532 222222 22233333321 1235667899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHH
Q 039402 750 RIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l 828 (1496)
|++||||++.+|+++||||||++||+.+.+.+.+.+.+...+++|||++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999888875443333358999999999998865 999999999999999999887
Q ss_pred Hh
Q 039402 829 IN 830 (1496)
Q Consensus 829 ~~ 830 (1496)
..
T Consensus 233 ~~ 234 (280)
T PRK13649 233 FQ 234 (280)
T ss_pred hc
Confidence 54
No 422
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=337.13 Aligned_cols=202 Identities=28% Similarity=0.423 Sum_probs=164.7
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~ 684 (1496)
++++|++++|+.. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 3678999999621 57999999999999999999999999999999999999999999999873 58
Q ss_pred EEccCCccCC-CcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHH
Q 039402 685 YVAQSPWIQS-GKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 756 (1496)
Q Consensus 685 yv~Q~~~i~~-~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 756 (1496)
|++|+|.++. .|++||+.++.. .+.+ +..++++..++.. .....+.+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999998885 699999987532 2211 2223333333321 013456778999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 757 LYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
++.+|+++||||||++||+.+...+.+.+..... .++|+|++||+++.+.. ||+|++|++|++++.|+.+++.+
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999998887654433333 38999999999998765 99999999999999999888754
No 423
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.3e-35 Score=339.56 Aligned_cols=211 Identities=20% Similarity=0.259 Sum_probs=169.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc--CCCccEEEECCeeCCCCChHHHh-cc
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIV--EPAAGQILIDGIDISLIGLHDLR-SR 1322 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~LR-~~ 1322 (1496)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999964 35999999999999999999999999999999999995 69999999999999888776654 57
Q ss_pred cEEEccccccccc-chhhcc-------CCCCC---Cc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 039402 1323 LSIIPQDPVMFEG-TVRSNL-------DPLEE---ST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1387 (1496)
Q Consensus 1323 i~iIpQdp~LF~g-TIR~NL-------dp~~~---~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1387 (1496)
++++||+|.++.. |..+++ ..... .. ++.+.+.++..++ |+++.+... ..+||+||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~--~~~LS~G~ 150 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKM-------PEDLLTRSV--NVGFSGGE 150 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCC-------ChhhcccCC--CCCCCHHH
Confidence 9999999987754 433332 21110 01 1122333444333 222211110 13699999
Q ss_pred HHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEccCcchhcc--cCEEEEEeCCeEeEecCh
Q 039402 1388 RQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS-DCTVLTIAHRITSVID--SDLVLLLNHGLIEEFDNP 1464 (1496)
Q Consensus 1388 rQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TVI~IAHRl~ti~~--~DrIlVL~~G~IvE~g~p 1464 (1496)
|||++||||++++|+||+|||||++||.++.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|++
T Consensus 151 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~ 230 (248)
T PRK09580 151 KKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDF 230 (248)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999987643 6899999999999987 899999999999999998
Q ss_pred hhH
Q 039402 1465 ANL 1467 (1496)
Q Consensus 1465 ~~L 1467 (1496)
+..
T Consensus 231 ~~~ 233 (248)
T PRK09580 231 TLV 233 (248)
T ss_pred HHH
Confidence 854
No 424
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-35 Score=338.42 Aligned_cols=205 Identities=26% Similarity=0.415 Sum_probs=169.2
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC--C---CccEEEEcCe--------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP--K---ISGTLKLCGT-------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~--~---~~G~i~~~g~-------- 682 (1496)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++|+|.++|.
T Consensus 11 ~~l~i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~ 87 (259)
T PRK14274 11 EVYQINGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVD 87 (259)
T ss_pred ceEEEeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccC
Confidence 3589999999995 3579999999999999999999999999999999999987 3 6999998763
Q ss_pred -------eEEEccCCccCCCcHHHHhccCCCC----CHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHH
Q 039402 683 -------KAYVAQSPWIQSGKIEDNILFGKEM----NRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 683 -------~~yv~Q~~~i~~~ti~eNI~~g~~~----~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 747 (1496)
++|++|++.+++.|++||+.++... +++. ..++++..++.+.+ .+..+..+.+|||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LS~Gq 160 (259)
T PRK14274 88 LVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-------KDRLHTQALSLSGGQ 160 (259)
T ss_pred HHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHH
Confidence 5899999999888999999876321 2221 22233333333221 123467788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||++||||++.+|+++||||||++||+++...+. +++....+++|+|+|||+++.+.. ||++++|++|++++.|+++
T Consensus 161 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 239 (259)
T PRK14274 161 QQRLCIARALATNPDVLLMDEPTSALDPVSTRKIE-ELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTN 239 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHH-HHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999988775 456555568999999999999865 9999999999999999999
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
++.+.
T Consensus 240 ~~~~~ 244 (259)
T PRK14274 240 KMFSN 244 (259)
T ss_pred HHhhC
Confidence 88653
No 425
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=344.31 Aligned_cols=204 Identities=24% Similarity=0.371 Sum_probs=165.0
Q ss_pred ccEEEEeeEEEecCCC--CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC------------
Q 039402 616 TALDIVDGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------ 681 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g------------ 681 (1496)
..++++|++++|+... ..++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 3589999999996321 13699999999999999999999999999999999999999999999876
Q ss_pred ------eeEEEccCCc--cCCCcHHHHhccCCC---CCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChH
Q 039402 682 ------TKAYVAQSPW--IQSGKIEDNILFGKE---MNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGG 746 (1496)
Q Consensus 682 ------~~~yv~Q~~~--i~~~ti~eNI~~g~~---~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 746 (1496)
.++|++|+|. ++..|++||+.|+.. ...+. ..+.++..++ +. ...++...+||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~---~~~~~~~~~LS~G 154 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQL-------PE---DYVKRSPFELSGG 154 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------Ch---hHhcCChhhCCHH
Confidence 2589999984 567799999988632 22221 1122222222 11 1235677899999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 747 QKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
||||++||||++.+|+++||||||++||+.+...+.+ ++..+ . .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 155 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 155 QKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFIN-LFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999888865 44443 3 38999999999998765 9999999999999999
Q ss_pred ChHHHHh
Q 039402 824 KYNDLIN 830 (1496)
Q Consensus 824 ~~~~l~~ 830 (1496)
+++++..
T Consensus 234 ~~~~~~~ 240 (289)
T PRK13645 234 SPFEIFS 240 (289)
T ss_pred CHHHHhc
Confidence 9888754
No 426
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=329.57 Aligned_cols=192 Identities=26% Similarity=0.406 Sum_probs=158.4
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC---------eeEEEcc
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------TKAYVAQ 688 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g---------~~~yv~Q 688 (1496)
++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 46789999985 35799999999999999999999999999999999999999999999987 3799999
Q ss_pred CCccCC-CcHHHHhccCCC---CC----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC
Q 039402 689 SPWIQS-GKIEDNILFGKE---MN----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 760 (1496)
Q Consensus 689 ~~~i~~-~ti~eNI~~g~~---~~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1496)
++.++. .|++||+.++.. .. +++..+.++..++. ....+...+||||||||++||||++.+
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELS-----------EYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCCh-----------HHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 998876 499999987431 11 12223333333332 233466789999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 761 SDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
|+++||||||++||+.+...+.+.+.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999988876543333458999999999998865 9999999999998754
No 427
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=338.43 Aligned_cols=201 Identities=28% Similarity=0.456 Sum_probs=167.1
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
..++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 4689999999995 357999999999999999999999999999999999999999999998872
Q ss_pred -------------eEEEccCCccCC-CcHHHHhccCC----CCCH----HHHHHHHHHhchhhHHHhccCCCcccccCCC
Q 039402 683 -------------KAYVAQSPWIQS-GKIEDNILFGK----EMNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERG 740 (1496)
Q Consensus 683 -------------~~yv~Q~~~i~~-~ti~eNI~~g~----~~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g 740 (1496)
++|++|++.++. .|++||+.++. ..+. ++..+.++..++.+.+ .++..
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 699999999886 59999998642 1222 1222233333332111 14667
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCe
Q 039402 741 INLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGK 818 (1496)
Q Consensus 741 ~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 818 (1496)
.+||||||||++|||||+++|+++||||||++||+.+.+.+.+ ++..+ .+|+|+|+|||+++++.. ||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLR-IMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 8999999999999999999999999999999999999998875 44444 358999999999999886 99999999999
Q ss_pred EEEecChHHHHh
Q 039402 819 ITQAGKYNDLIN 830 (1496)
Q Consensus 819 i~~~G~~~~l~~ 830 (1496)
+++.|+++++..
T Consensus 230 i~~~~~~~~~~~ 241 (257)
T PRK10619 230 IEEEGAPEQLFG 241 (257)
T ss_pred EEEeCCHHHhhh
Confidence 999999988764
No 428
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=330.11 Aligned_cols=190 Identities=24% Similarity=0.384 Sum_probs=158.8
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------eEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 685 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------~~y 685 (1496)
++++|+++.|+ ++++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 i~~~~~~~~~~---~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYG---KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEEC---CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEE
Confidence 46889999995 347999999999999 99999999999999999999999999999999872 689
Q ss_pred EccCCccCCC-cHHHHhccCCC---CC----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 686 VAQSPWIQSG-KIEDNILFGKE---MN----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 686 v~Q~~~i~~~-ti~eNI~~g~~---~~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
++|++.++.. |++||+.+... .+ +++.+++++.+++.+.. .....+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-----------KKKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-----------hCchhhCCHHHHHHHHHHHHH
Confidence 9999998875 99999986421 12 12334445555553322 345678999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
+++|+++||||||++||+.+.+.+.+ .++...+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRN-LLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999988865 45555557999999999999865 9999999999998765
No 429
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.6e-35 Score=340.44 Aligned_cols=201 Identities=26% Similarity=0.358 Sum_probs=166.8
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
..++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 6 NLVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred ceEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 3589999999995 357999999999999999999999999999999999999999999999872
Q ss_pred ---eEEEccCCccCCC-cHHHHhccCC----CCCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 683 ---KAYVAQSPWIQSG-KIEDNILFGK----EMNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 683 ---~~yv~Q~~~i~~~-ti~eNI~~g~----~~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
++|++|++.++.. |++||+.++. ..+.+ +..+.++..++. ........+||||||||
T Consensus 83 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgGq~qr 151 (269)
T PRK11831 83 RKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLR-----------GAAKLMPSELSGGMARR 151 (269)
T ss_pred hhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHHHHHH
Confidence 6899999998875 9999998742 12222 122233333332 12345678999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
++||||++.+|+++||||||++||+.+.+.+.+. +..+ .+ |+|+|++||+++++.. ||++++|++|++++.|++++
T Consensus 152 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 230 (269)
T PRK11831 152 AALARAIALEPDLIMFDEPFVGQDPITMGVLVKL-ISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQA 230 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999998888654 4443 33 7999999999998876 99999999999999999999
Q ss_pred HHhc
Q 039402 828 LINS 831 (1496)
Q Consensus 828 l~~~ 831 (1496)
+.+.
T Consensus 231 ~~~~ 234 (269)
T PRK11831 231 LQAN 234 (269)
T ss_pred HhcC
Confidence 8754
No 430
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.3e-35 Score=351.46 Aligned_cols=189 Identities=31% Similarity=0.439 Sum_probs=159.9
Q ss_pred CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC---------------------eeEEEccCC
Q 039402 632 HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------------TKAYVAQSP 690 (1496)
Q Consensus 632 ~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g---------------------~~~yv~Q~~ 690 (1496)
...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++||+|++
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 35689999999999999999999999999999999999999999999987 269999999
Q ss_pred ccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCC
Q 039402 691 WIQS-GKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSD 762 (1496)
Q Consensus 691 ~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1496)
.+++ .|++||+.++.. .++ ++..++++..+|.+. ......+|||||||||+|||||+.+|+
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~-----------~~~~~~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQW-----------ADKKPGELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9987 699999998742 222 223344444444322 345667899999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 039402 763 IYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|+|||||||+||+.+...+++.+.....+ ++|+|+|||+++++. .||+|++|++|++++.|+++++..+
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 99999999999999999987665544333 899999999999875 5999999999999999999998754
No 431
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.5e-35 Score=334.69 Aligned_cols=190 Identities=27% Similarity=0.416 Sum_probs=163.8
Q ss_pred ceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccccc-cchhhcc
Q 039402 1263 LQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVMFE-GTVRSNL 1341 (1496)
Q Consensus 1263 Lk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~-gTIR~NL 1341 (1496)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 589999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CCC-----CCCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCC
Q 039402 1342 DPL-----EESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEATAS 1412 (1496)
Q Consensus 1342 dp~-----~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTss 1412 (1496)
... ...++ +++.++++++++.+...+ ....||||||||++|||||+++|++|||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGLTEAADK-----------RPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcC-----------ChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 531 22332 246677888877654332 2357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1413 VDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1413 lD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|++.+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 999999999999988643 7899999999999876 9999999999999999887763
No 432
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.7e-34 Score=373.64 Aligned_cols=216 Identities=25% Similarity=0.364 Sum_probs=148.7
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHh------cccC----C-----------CccE
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLF------RIVE----P-----------AAGQ 1303 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~------rl~e----p-----------~~G~ 1303 (1496)
.++++|++. ..|+|+|++|++||.+||+|++|||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 588999863 2599999999999999999999999999998333 1111 1 1123
Q ss_pred EEECCeeCCC---------CC-hHHHhcccEEEcc------cccccc--------------cchhhccCCC---------
Q 039402 1304 ILIDGIDISL---------IG-LHDLRSRLSIIPQ------DPVMFE--------------GTVRSNLDPL--------- 1344 (1496)
Q Consensus 1304 I~IDG~dI~~---------i~-l~~LR~~i~iIpQ------dp~LF~--------------gTIR~NLdp~--------- 1344 (1496)
|.||-.+|.. .+ .+.+|.-++=.|+ .+-.|+ |.+.-++...
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 5666655542 12 2446777766554 234443 1222111100
Q ss_pred ---CCCcHH--------------------HHHHHHHHc-CCcHHHHhc-cCCccc-ccccCCCCCCchHHHHHHHHHHHc
Q 039402 1345 ---EESTDE--------------------QIWEALDKC-QLGDEVRKK-EGKLDS-KVTENGENWSMGQRQLVCLGRVLL 1398 (1496)
Q Consensus 1345 ---~~~sd~--------------------eI~~aL~~~-~L~~~i~~l-p~gLdt-~v~e~G~nLS~GQrQll~LARALL 1398 (1496)
..|.++ |..+..+.. .+.+..+-+ .-||+. .++.....||||||||++|||+|+
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 011111 111111110 011111100 125554 367778899999999999999999
Q ss_pred c---CCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcccCEEEEE------eCCeEeEecChhhH
Q 039402 1399 K---RSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVIDSDLVLLL------NHGLIEEFDNPANL 1467 (1496)
Q Consensus 1399 r---~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~~DrIlVL------~~G~IvE~g~p~~L 1467 (1496)
+ +|+++||||||++||+.+...+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 589999999999999999999999998875 478999999999999999999999 79999999999886
No 433
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.8e-35 Score=335.23 Aligned_cols=191 Identities=24% Similarity=0.354 Sum_probs=160.3
Q ss_pred CccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEc-cccccc-ccch
Q 039402 1260 PLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIP-QDPVMF-EGTV 1337 (1496)
Q Consensus 1260 ~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIp-Qdp~LF-~gTI 1337 (1496)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++++| |++.+| ..|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4599999999999999999999999999999999999999999999999987653 346788999997 667776 4699
Q ss_pred hhccCCC---CCCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEEcCC
Q 039402 1338 RSNLDPL---EESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLDEAT 1410 (1496)
Q Consensus 1338 R~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLDEaT 1410 (1496)
++|+... ...+. +++.++++..++.+.. |+. ...||+|||||++||||++++|++|||||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~----~~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELL-------DTP----VRQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------cCC----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 9998531 12222 2345566666664332 332 3569999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEec
Q 039402 1411 ASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEFD 1462 (1496)
Q Consensus 1411 sslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g 1462 (1496)
++||+++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999998643 6899999999998866 9999999999998765
No 434
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.4e-35 Score=341.21 Aligned_cols=201 Identities=25% Similarity=0.410 Sum_probs=171.0
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC------------eeE
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TKA 684 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g------------~~~ 684 (1496)
.++++|++..|.. ++.+|+||||+|++|++++++||||||||||+++|+|.+.|++|+|.++| ++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheE
Confidence 4678899999952 36899999999999999999999999999999999999999999999998 369
Q ss_pred EEccCCccCC-CcHHHHhccCC-----C--CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHH
Q 039402 685 YVAQSPWIQS-GKIEDNILFGK-----E--MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARA 756 (1496)
Q Consensus 685 yv~Q~~~i~~-~ti~eNI~~g~-----~--~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARA 756 (1496)
|+||+|.++. .|++||+.|-. + .++++.+++++..+|.++. +.+..+||+|||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHHH
Confidence 9999998764 59999998732 1 2345666677766664311 45678999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCC-cEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 757 LYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSS-KTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~-~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
|.++|++|||||||+||||..+..+.+.+.....++ +||+++||.++.+.. ||+|++|++|++++.|+.+++..
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 999999999999999999999888875444444456 799999999999876 99999999999999999888654
No 435
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.2e-35 Score=330.26 Aligned_cols=191 Identities=28% Similarity=0.414 Sum_probs=157.0
Q ss_pred EEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC---------------
Q 039402 618 LDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1496)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--------------- 681 (1496)
++++|++++|+... .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 67899999996321 24699999999999999999999999999999999999999999999876
Q ss_pred --eeEEEccCCccCC-CcHHHHhccCC---CCCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHH
Q 039402 682 --TKAYVAQSPWIQS-GKIEDNILFGK---EMNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRI 751 (1496)
Q Consensus 682 --~~~yv~Q~~~i~~-~ti~eNI~~g~---~~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv 751 (1496)
.++|++|++.++. .|++||+.++. ..+.. +..+.++.+++. ........+||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLE-----------HRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHHHHHHH
Confidence 2699999998875 59999998742 12222 222333333332 233566789999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCccccCCEEEEEeCCeEE
Q 039402 752 QIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPAADLILVMKDGKIT 820 (1496)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~ 820 (1496)
+||||++.+|+++||||||++||+++...+.+ ++..+ . .++|+|++||+++++..+|++++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFD-LMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999888875 44444 3 379999999999998779999999999975
No 436
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=336.58 Aligned_cols=204 Identities=25% Similarity=0.405 Sum_probs=168.9
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcC---CCC--CccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGE---VPK--ISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~---~~~--~~G~i~~~g~--------- 682 (1496)
.++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|. ++| ++|+|.++|.
T Consensus 3 ~l~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYG---DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEEC---CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 588999999995 35799999999999999999999999999999999996 454 5899998762
Q ss_pred ------eEEEccCCccCCCcHHHHhccCCCC----CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 ------KAYVAQSPWIQSGKIEDNILFGKEM----NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~ti~eNI~~g~~~----~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|++.++..|++||+.++... +. ++..++++.+++.++++ +..++.+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 6999999999888999999875321 11 22334444444433221 234577889999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
||++||||++.+|+++||||||++||+.+...+.+ .++.+.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEE-LIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999888865 45555568999999999999865 99999999999999999998
Q ss_pred HHhc
Q 039402 828 LINS 831 (1496)
Q Consensus 828 l~~~ 831 (1496)
+.++
T Consensus 232 ~~~~ 235 (250)
T PRK14245 232 IFTN 235 (250)
T ss_pred HhcC
Confidence 8654
No 437
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=336.30 Aligned_cols=199 Identities=25% Similarity=0.403 Sum_probs=166.1
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~ 684 (1496)
++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 3 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 78899999995 357999999999999999999999999999999999999999999999873 69
Q ss_pred EEccCCccCCC-cHHHHhccCCC-----C---C---HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 685 YVAQSPWIQSG-KIEDNILFGKE-----M---N---RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 685 yv~Q~~~i~~~-ti~eNI~~g~~-----~---~---~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
|++|++.++.. |+.||+.++.. + . .++..++++.+++.+ .....+..||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINH-----------LADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHH-----------HHcCCcccCCHHHHHHHH
Confidence 99999988765 99999988631 1 1 122333344444432 234567899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
||||++.+|+++||||||++||+.+.+.+.+.+.....+++|+|++||+++.+.. ||++++|++|+++..|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999888875443323358999999999999865 99999999999999999888753
No 438
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=3.8e-35 Score=324.51 Aligned_cols=194 Identities=26% Similarity=0.353 Sum_probs=168.6
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 35899999999999999999999999999999999999999999999999987643 567899999
Q ss_pred Eccccccc-ccchhhccCCC-CCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCE
Q 039402 1326 IPQDPVMF-EGTVRSNLDPL-EESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKI 1403 (1496)
Q Consensus 1326 IpQdp~LF-~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~I 1403 (1496)
+||++.++ ..|+++|+... ....++++.++++..++.+.... ...+||+|||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFEDR-----------PVAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhhcC-----------chhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999876 57999999643 23467788899999998654322 2357999999999999999999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchh-cccCEEEEE
Q 039402 1404 LMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSV-IDSDLVLLL 1453 (1496)
Q Consensus 1404 LiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti-~~~DrIlVL 1453 (1496)
|||||||++||+.+.+.+.+.|++.. +++|+|+|+|+...+ ..||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998754 478999999987665 459999887
No 439
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=338.51 Aligned_cols=203 Identities=29% Similarity=0.455 Sum_probs=168.2
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
..++++|+++.|+. +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 6 VMIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred eEEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 35899999999952 2457999999999999999999999999999999999999999999999873
Q ss_pred eEEEccCCc--cCCCcHHHHhccCCC---CCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 KAYVAQSPW--IQSGKIEDNILFGKE---MNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 ~~yv~Q~~~--i~~~ti~eNI~~g~~---~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++|++|+|. +++.|++|||.++.. ++.++ ..++++..++.+. ..+...+||||||||++|
T Consensus 85 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~l 153 (271)
T PRK13632 85 IGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDY-----------LDKEPQNLSGGQKQRVAI 153 (271)
T ss_pred eEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCCcccCCHHHHHHHHH
Confidence 589999984 557799999988532 23332 2334444444322 345678999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHh
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
|||++.+|+++||||||++||+.+.+.+++.+.+...+ ++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 154 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 154 ASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999988887544333334 589999999999887899999999999999999888754
No 440
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=337.56 Aligned_cols=205 Identities=27% Similarity=0.377 Sum_probs=172.1
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcCe--------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT-------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g~-------- 682 (1496)
..++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 19 ~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 4689999999995 3679999999999999999999999999999999999996 58999998872
Q ss_pred -------eEEEccCCccCCCcHHHHhccCCC----CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHH
Q 039402 683 -------KAYVAQSPWIQSGKIEDNILFGKE----MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 683 -------~~yv~Q~~~i~~~ti~eNI~~g~~----~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 747 (1496)
++|++|++.++..|++|||.++.. .++ ++..++++.+++.+++. +..++.+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 599999999998999999988532 122 22334455555543331 23467788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEE-TMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888865 45555568999999999998865 9999999999999999998
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 88653
No 441
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=4.1e-35 Score=312.98 Aligned_cols=159 Identities=30% Similarity=0.545 Sum_probs=148.2
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChH-HHhcccE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH-DLRSRLS 1324 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~-~LR~~i~ 1324 (1496)
|+++|++++|+.. ++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 5789999999643 599999999999999999999999999999999999999999999999999888764 4678899
Q ss_pred EEcccccccccchhhccCCCCCCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEE
Q 039402 1325 IIPQDPVMFEGTVRSNLDPLEESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKIL 1404 (1496)
Q Consensus 1325 iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~IL 1404 (1496)
++|| ||+|||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 8999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeE
Q 039402 1405 MLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1405 iLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE 1460 (1496)
+|||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999998864 47899999999998866 99999999999976
No 442
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.8e-35 Score=334.35 Aligned_cols=208 Identities=23% Similarity=0.348 Sum_probs=167.3
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFD---GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 378999999995 357999999999999999999999999999999999999999999999872
Q ss_pred eEEEccCCccCCC-cHHHHhccCCCCCHHHH------HHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHH
Q 039402 683 KAYVAQSPWIQSG-KIEDNILFGKEMNRERY------NAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 755 (1496)
Q Consensus 683 ~~yv~Q~~~i~~~-ti~eNI~~g~~~~~~~~------~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 755 (1496)
++|++|++.++.+ |++||+.++...+...+ ..........+.++.+ |......+...+||||||||++|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHH
Confidence 6899999998875 99999988532110000 0000000112223322 2223346778899999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 756 ALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
|++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAE-LLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 9999999999999999999999888865 55555557999999999999875 99999999999999999988753
No 443
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.1e-35 Score=346.30 Aligned_cols=206 Identities=26% Similarity=0.436 Sum_probs=169.4
Q ss_pred ccEEEEeeEEEecCCC----------CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---
Q 039402 616 TALDIVDGNFSWDISS----------HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~----------~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--- 682 (1496)
..++++|++++|+... ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 4689999999996321 246899999999999999999999999999999999999999999999873
Q ss_pred -------------eEEEccCCc--cC-CCcHHHHhccCC-----CCCHHH----HHHHHHHhchhhHHHhccCCCccccc
Q 039402 683 -------------KAYVAQSPW--IQ-SGKIEDNILFGK-----EMNRER----YNAVLDACSLKKDLEILSFGDQTVIG 737 (1496)
Q Consensus 683 -------------~~yv~Q~~~--i~-~~ti~eNI~~g~-----~~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig 737 (1496)
++||+|+|. ++ ..||.|||.++. ..+++. ..+.++..++.+ ...+
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~ 156 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLIN 156 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhc
Confidence 699999983 54 579999997532 233322 223344444421 1235
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEE
Q 039402 738 ERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVM 814 (1496)
Q Consensus 738 ~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l 814 (1496)
..+.+|||||||||+|||||+.+|+++|+||||++||+.+...+.+. +..+ . .+.|+|+||||++.+.. ||+|++|
T Consensus 157 ~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~l-L~~l~~~~~~til~iTHdl~~~~~~~dri~vl 235 (331)
T PRK15079 157 RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNL-LQQLQREMGLSLIFIAHDLAVVKHISDRVLVM 235 (331)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 67789999999999999999999999999999999999999988764 4443 3 38999999999999876 9999999
Q ss_pred eCCeEEEecChHHHHhcC
Q 039402 815 KDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 815 ~~G~i~~~G~~~~l~~~~ 832 (1496)
++|+|++.|+.+++.++.
T Consensus 236 ~~G~ive~g~~~~i~~~~ 253 (331)
T PRK15079 236 YLGHAVELGTYDEVYHNP 253 (331)
T ss_pred ECCEEEEEcCHHHHHcCC
Confidence 999999999999987653
No 444
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.3e-35 Score=317.83 Aligned_cols=166 Identities=33% Similarity=0.593 Sum_probs=150.3
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------eEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 685 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------~~y 685 (1496)
++++|++++|+.. .+++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 4688999999632 247999999999999999999999999999999999999999999999884 689
Q ss_pred EccCCccCCCcHHHHhccCCCCCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEE
Q 039402 686 VAQSPWIQSGKIEDNILFGKEMNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYL 765 (1496)
Q Consensus 686 v~Q~~~i~~~ti~eNI~~g~~~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ill 765 (1496)
++|++++++.|++||+ +.+||||||||++||||++.+|+++|
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 46899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccccCCEEEEEeCCeEEEec
Q 039402 766 FDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQAG 823 (1496)
Q Consensus 766 LDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G 823 (1496)
|||||++||+.+.+.+++. +....+++|+|++||++++++.||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~-l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSL-IFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHH-HHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999998888754 44445689999999999999889999999999998754
No 445
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=340.38 Aligned_cols=202 Identities=29% Similarity=0.425 Sum_probs=169.5
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCc---cEEEEcCe----------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS---GTLKLCGT---------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~---G~i~~~g~---------- 682 (1496)
..++++|+++.|+.. .+++++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 468999999999532 3469999999999999999999999999999999999999988 89999873
Q ss_pred ---eEEEccCCc--cCCCcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 683 ---KAYVAQSPW--IQSGKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 683 ---~~yv~Q~~~--i~~~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
++|++|+|+ +++.|++|||.|+.. .+.+ +..++++.+++.+ ..+....+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLD-----------YIDSEPANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChh-----------HhcCCcccCCHHHHHH
Confidence 599999984 567899999988632 2232 2344455555533 2345668999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hC-CcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHH
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LS-SKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l 828 (1496)
++||||++.+|+++||||||++||+.+...+.+. +..+ .+ |+|||++||+++.+..||++++|++|++++.|+++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 230 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKL-IRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEI 230 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999988764 4443 33 8999999999999877999999999999999999887
Q ss_pred Hh
Q 039402 829 IN 830 (1496)
Q Consensus 829 ~~ 830 (1496)
..
T Consensus 231 ~~ 232 (282)
T PRK13640 231 FS 232 (282)
T ss_pred hc
Confidence 64
No 446
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=338.48 Aligned_cols=205 Identities=23% Similarity=0.350 Sum_probs=168.3
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcC---------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 681 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g--------- 681 (1496)
..++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 20 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 20 HILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred ceEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 4689999999995 3579999999999999999999999999999999999864 6899998876
Q ss_pred ------eeEEEccCCccCCCcHHHHhccCCCC----CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHH
Q 039402 682 ------TKAYVAQSPWIQSGKIEDNILFGKEM----NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 682 ------~~~yv~Q~~~i~~~ti~eNI~~g~~~----~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 747 (1496)
.++|++|++.+++.|++||+.++... .. ++..+.++.+++..++ ....+..+.+|||||
T Consensus 97 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq 169 (268)
T PRK14248 97 VVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQ 169 (268)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHH
Confidence 26899999999989999999876321 11 1122333333332111 123467788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 170 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 248 (268)
T PRK14248 170 QQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEE-LITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTE 248 (268)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888864 55555557899999999998765 9999999999999999998
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
++..+
T Consensus 249 ~~~~~ 253 (268)
T PRK14248 249 QIFTS 253 (268)
T ss_pred HHHhC
Confidence 87653
No 447
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=337.70 Aligned_cols=205 Identities=24% Similarity=0.374 Sum_probs=169.8
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcCe--------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT-------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g~-------- 682 (1496)
..++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|.++ |++|+|.++|.
T Consensus 12 ~~l~i~nl~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYG---TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEEC---CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 4699999999995 3579999999999999999999999999999999999987 68999998762
Q ss_pred -------eEEEccCCccCCCcHHHHhccCCCC---C---HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHH
Q 039402 683 -------KAYVAQSPWIQSGKIEDNILFGKEM---N---RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 749 (1496)
Q Consensus 683 -------~~yv~Q~~~i~~~ti~eNI~~g~~~---~---~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 749 (1496)
++|++|++.++..|++||+.++... + +++..++++.+++...+ .+...+...+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCHHHHH
Confidence 6899999998888999999986432 1 12233344444332211 22346677899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeC-----------C
Q 039402 750 RIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKD-----------G 817 (1496)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~-----------G 817 (1496)
|++||||++.+|+++||||||++||+.+...+.+ +++...+++|+|++||+++.+.. ||++++|++ |
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g 240 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEE-TMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVG 240 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccc
Confidence 9999999999999999999999999999888865 55555567999999999998865 999999996 6
Q ss_pred eEEEecChHHHHhc
Q 039402 818 KITQAGKYNDLINS 831 (1496)
Q Consensus 818 ~i~~~G~~~~l~~~ 831 (1496)
++++.|+.+++.+.
T Consensus 241 ~~~~~~~~~~~~~~ 254 (269)
T PRK14259 241 YLVEFNETKKIFNS 254 (269)
T ss_pred eEEEeCCHHHHHhC
Confidence 78999999888653
No 448
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-35 Score=336.35 Aligned_cols=204 Identities=26% Similarity=0.410 Sum_probs=167.8
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCC--CC---CccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV--PK---ISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~--~~---~~G~i~~~g~--------- 682 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|.. +| ++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYN---KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 588999999995 357999999999999999999999999999999999985 36 5999998762
Q ss_pred ------eEEEccCCccCCCcHHHHhccCCC---C-CHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 ------KAYVAQSPWIQSGKIEDNILFGKE---M-NRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~ti~eNI~~g~~---~-~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|++.+++.|++||+.++.. . +++ +..++++.+++.+.+. +..++.+.+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 689999999999999999987521 1 111 2223344444322221 234677889999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
||++||||++.+|+++||||||++||+.+...+++ ++....+++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEE-TLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHH-HHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999988875 55555557999999999998765 99999999999999999988
Q ss_pred HHhc
Q 039402 828 LINS 831 (1496)
Q Consensus 828 l~~~ 831 (1496)
+.+.
T Consensus 234 ~~~~ 237 (252)
T PRK14239 234 MFMN 237 (252)
T ss_pred HHhC
Confidence 8654
No 449
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=335.85 Aligned_cols=206 Identities=22% Similarity=0.334 Sum_probs=166.2
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 589999999995 357999999999999999999999999999999999999999999999873
Q ss_pred eEEEccCCccCCC-cHHHHhccCCCC----------------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCCh
Q 039402 683 KAYVAQSPWIQSG-KIEDNILFGKEM----------------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSG 745 (1496)
Q Consensus 683 ~~yv~Q~~~i~~~-ti~eNI~~g~~~----------------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSG 745 (1496)
++|++|++.++.. |++||+.++... .+.. .+..+ ...+.++.+ |.....++++.+|||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~l~~~--gl~~~~~~~~~~LS~ 156 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAE-SEALD--RAATWLERV--GLLEHANRQAGNLAY 156 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccch-hHHHH--HHHHHHHhC--ChhhhhhCChhhCCH
Confidence 4789999998875 999999976310 0000 00000 011122222 223345678889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 746 GQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 746 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
|||||++||||++.+|+++||||||++||+.+...+.+.+.....+ ++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 157 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 236 (255)
T PRK11300 157 GQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANG 236 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecC
Confidence 9999999999999999999999999999999988886544333333 7999999999999865 9999999999999999
Q ss_pred ChHHHHh
Q 039402 824 KYNDLIN 830 (1496)
Q Consensus 824 ~~~~l~~ 830 (1496)
+.+++..
T Consensus 237 ~~~~~~~ 243 (255)
T PRK11300 237 TPEEIRN 243 (255)
T ss_pred CHHHHhh
Confidence 9888753
No 450
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=336.66 Aligned_cols=205 Identities=24% Similarity=0.411 Sum_probs=169.2
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcCe--------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT-------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g~-------- 682 (1496)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++| ++|+|.++|.
T Consensus 11 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 3689999999985 35799999999999999999999999999999999999975 7999998762
Q ss_pred -------eEEEccCCccCCCcHHHHhccCCC---CCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 -------KAYVAQSPWIQSGKIEDNILFGKE---MNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 -------~~yv~Q~~~i~~~ti~eNI~~g~~---~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|++.++..|++||+.++.. .+.+. ..++++.+++..++ ....++...+||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQ 160 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHH
Confidence 589999999988999999987531 22222 23334444332211 1234567789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
||++||||++.+|+++||||||++||+.+...+.+ +++.+.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 239 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIED-LIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQ 239 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888864 55555568999999999999865 99999999999999999988
Q ss_pred HHhc
Q 039402 828 LINS 831 (1496)
Q Consensus 828 l~~~ 831 (1496)
+...
T Consensus 240 ~~~~ 243 (258)
T PRK14268 240 IFHN 243 (258)
T ss_pred HhcC
Confidence 8643
No 451
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4e-35 Score=331.56 Aligned_cols=198 Identities=28% Similarity=0.461 Sum_probs=163.6
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--------------ee
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------TK 683 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--------------~~ 683 (1496)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYG---QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeC---CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 46889999995 35799999999999999999999999999999999999999999999986 26
Q ss_pred EEEccCCccCCC-cHHHHhccCCCC---C-HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHc
Q 039402 684 AYVAQSPWIQSG-KIEDNILFGKEM---N-RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 758 (1496)
Q Consensus 684 ~yv~Q~~~i~~~-ti~eNI~~g~~~---~-~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1496)
+|++|++.++.. |++||+.++... . .+.+.++++..+. ......+...+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 899999988875 999999876321 1 1222333333221 112235677899999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHH
Q 039402 759 QDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l 828 (1496)
++|+++||||||++||+.+...+.+.+.+... .++|+|++||+++++.. ||++++|++|++++.|+.+++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999998888754433333 37999999999999875 999999999999999998876
No 452
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-36 Score=321.69 Aligned_cols=213 Identities=25% Similarity=0.418 Sum_probs=186.0
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH-hcccE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RSRLS 1324 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i~ 1324 (1496)
.+.+|++.+|..- .+++|+||++++||.+|++|||||||||+++++.|+|+|++|+|.++|.||..++.+.. |..|+
T Consensus 5 L~v~~l~k~FGGl--~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGGL--TAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCCE--EEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 6789999999643 49999999999999999999999999999999999999999999999999999998884 66688
Q ss_pred EEccccccccc-chhhccCCCCC-------------C--cH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCC
Q 039402 1325 IIPQDPVMFEG-TVRSNLDPLEE-------------S--TD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWS 1384 (1496)
Q Consensus 1325 iIpQdp~LF~g-TIR~NLdp~~~-------------~--sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1384 (1496)
--.|.+-+|++ |+-||+.-... + .+ ++-.+.|+.++|.+.. .+...+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a-----------~~~A~~Ls 151 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELA-----------DRPAGNLS 151 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhh-----------cchhhcCC
Confidence 88999999988 99999853210 1 12 3345566777665543 34456899
Q ss_pred chHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEeCCeEeEe
Q 039402 1385 MGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLNHGLIEEF 1461 (1496)
Q Consensus 1385 ~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~ 1461 (1496)
.||+.||-|||||..+|++|+||||.|++.+.-...+.+.|++.-+ +.||++|-||++.|++ ||||+||+.|+++..
T Consensus 152 yG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAe 231 (250)
T COG0411 152 YGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAE 231 (250)
T ss_pred hhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCccc
Confidence 9999999999999999999999999999999999999999998774 4899999999999998 999999999999999
Q ss_pred cChhhHhhcC
Q 039402 1462 DNPANLLENK 1471 (1496)
Q Consensus 1462 g~p~~Ll~~~ 1471 (1496)
|+|++..+++
T Consensus 232 G~P~eV~~dp 241 (250)
T COG0411 232 GTPEEVRNNP 241 (250)
T ss_pred CCHHHHhcCH
Confidence 9999999775
No 453
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.7e-35 Score=336.08 Aligned_cols=200 Identities=30% Similarity=0.432 Sum_probs=165.5
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC---------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--------------- 681 (1496)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFH---GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 378999999995 35799999999999999999999999999999999999999999998865
Q ss_pred ------eeEEEccCCccCC-CcHHHHhccCC----CCCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChH
Q 039402 682 ------TKAYVAQSPWIQS-GKIEDNILFGK----EMNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGG 746 (1496)
Q Consensus 682 ------~~~yv~Q~~~i~~-~ti~eNI~~g~----~~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 746 (1496)
.++|++|++.++. .|++||+.++. ..+.+ +..+.++..++ .......+.+||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G 148 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGL-----------AGKETSYPRRLSGG 148 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------cchhhCChhhCChH
Confidence 2689999998875 69999998642 12221 12222333222 22235677899999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecC
Q 039402 747 QKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGK 824 (1496)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~ 824 (1496)
||||++||||++.+|+++||||||++||+.+...+.+ ++..+ .+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 227 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLN-TIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGP 227 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999888875 44444 358999999999999865 99999999999999999
Q ss_pred hHHHHhc
Q 039402 825 YNDLINS 831 (1496)
Q Consensus 825 ~~~l~~~ 831 (1496)
.+++.+.
T Consensus 228 ~~~~~~~ 234 (250)
T PRK11264 228 AKALFAD 234 (250)
T ss_pred HHHHhcC
Confidence 9887643
No 454
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=352.83 Aligned_cols=187 Identities=28% Similarity=0.425 Sum_probs=157.8
Q ss_pred CceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC-----------------eeEEEccCCccCC-C
Q 039402 634 PTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-----------------TKAYVAQSPWIQS-G 695 (1496)
Q Consensus 634 ~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g-----------------~~~yv~Q~~~i~~-~ 695 (1496)
++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++| .++||+|++.++. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 479999999999999999999999999999999999999999999986 2689999999886 5
Q ss_pred cHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEec
Q 039402 696 KIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDD 768 (1496)
Q Consensus 696 ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDe 768 (1496)
|++|||.++.. ++. ++..++++.+++.+ .......+|||||||||+|||||+.+|+++||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~-----------~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLEN-----------YAHSYPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh-----------hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999998642 222 22334444444432 2345668999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 769 PFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 769 p~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||++||+.+.+.+.+.+.+... .++|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999988765444333 48999999999998765 999999999999999999998764
No 455
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-35 Score=338.39 Aligned_cols=203 Identities=28% Similarity=0.431 Sum_probs=169.4
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|++++|+.....++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 588999999996332346999999999999999999999999999999999999999999999873 5
Q ss_pred EEEccCCc--cCCCcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 684 AYVAQSPW--IQSGKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 684 ~yv~Q~~~--i~~~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+|++|+|. ++..|+.|||.++.. ...+ +++++++.+++.+. ......+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDF-----------KTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhH-----------hhCCcccCCHHHHHHHHHH
Confidence 89999984 667899999987532 2222 23344455444322 2345689999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-C-CcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-S-SKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||++.+|+++||||||++||+.+.+.+.+ ++..+. + |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMR-VIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999988875 444443 3 8999999999999878999999999999999999888654
No 456
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-35 Score=334.21 Aligned_cols=199 Identities=28% Similarity=0.428 Sum_probs=166.1
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLG---GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 378899999995 357999999999999999999999999999999999999999999999883 5
Q ss_pred EEEccCCcc-CCCcHHHHhccCCC-C--C----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHH
Q 039402 684 AYVAQSPWI-QSGKIEDNILFGKE-M--N----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIAR 755 (1496)
Q Consensus 684 ~yv~Q~~~i-~~~ti~eNI~~g~~-~--~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LAR 755 (1496)
+|++|++.+ +..|++||+.++.. . + +++.++.++..++.+ .......+||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-----------LAGRDYPQLSGGEQQRVQLAR 147 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-----------HhcCCcccCCHHHHHHHHHHH
Confidence 899999987 56799999988642 1 1 122333444444432 234567899999999999999
Q ss_pred HHc------cCCCEEEEecCCCCCCHHHHHHHHHHHHHHH--hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 756 ALY------QDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL--LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 756 Al~------~~~~illLDep~saLD~~~~~~i~~~~~~~~--~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|++ .+|+++||||||++||+.+...+.+ ++..+ .+++|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 226 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLR-LARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPA 226 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHH
Confidence 999 5999999999999999999888865 45444 358999999999999874 9999999999999999988
Q ss_pred HHHh
Q 039402 827 DLIN 830 (1496)
Q Consensus 827 ~l~~ 830 (1496)
++..
T Consensus 227 ~~~~ 230 (258)
T PRK13548 227 EVLT 230 (258)
T ss_pred HHhC
Confidence 8754
No 457
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=4.7e-34 Score=382.46 Aligned_cols=207 Identities=26% Similarity=0.279 Sum_probs=149.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHH---------HHhcccCCCc----c----EEEEC
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQ---------TLFRIVEPAA----G----QILID 1307 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~---------~L~rl~ep~~----G----~I~ID 1307 (1496)
.++++|++. ..|+|+|++|++||.+||.|++|||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 588888762 2799999999999999999999999999999 4455432211 1 24555
Q ss_pred CeeCCCCCh----------HHHh---------cccE-----EEccc------------------c---------------
Q 039402 1308 GIDISLIGL----------HDLR---------SRLS-----IIPQD------------------P--------------- 1330 (1496)
Q Consensus 1308 G~dI~~i~l----------~~LR---------~~i~-----iIpQd------------------p--------------- 1330 (1496)
-.+|..-+. +++| ++.+ +..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 555443211 2455 1111 12221 1
Q ss_pred -----ccccc-chhhccCCCCC-C-----cHHHHHH---HHHHcCCcHHHHhccCCcccc-cccCCCCCCchHHHHHHHH
Q 039402 1331 -----VMFEG-TVRSNLDPLEE-S-----TDEQIWE---ALDKCQLGDEVRKKEGKLDSK-VTENGENWSMGQRQLVCLG 1394 (1496)
Q Consensus 1331 -----~LF~g-TIR~NLdp~~~-~-----sd~eI~~---aL~~~~L~~~i~~lp~gLdt~-v~e~G~nLS~GQrQll~LA 1394 (1496)
+.+.+ ||.|||+.... + +.+++.+ +|+.+ ||+.. .+.....||||||||++||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~v-----------GL~~l~l~q~~~tLSGGE~QRV~LA 821 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSL-----------GLDYLPLGRPLSSLSGGEIQRLKLA 821 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHc-----------CCcchhhcCccccCCHHHHHHHHHH
Confidence 13334 77777764211 0 1222322 33333 34432 4556678999999999999
Q ss_pred HHHc---cCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcccCEEEEEe------CCeEeEecCh
Q 039402 1395 RVLL---KRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVIDSDLVLLLN------HGLIEEFDNP 1464 (1496)
Q Consensus 1395 RALL---r~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~~DrIlVL~------~G~IvE~g~p 1464 (1496)
|||+ ++|+++||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|
T Consensus 822 raL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 822 YELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred HHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 9998 5999999999999999999999999998864 4789999999999998899999996 7999999999
Q ss_pred hhHhh
Q 039402 1465 ANLLE 1469 (1496)
Q Consensus 1465 ~~Ll~ 1469 (1496)
+++..
T Consensus 902 eel~~ 906 (1809)
T PRK00635 902 EELIH 906 (1809)
T ss_pred HHHHh
Confidence 99986
No 458
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.3e-35 Score=329.86 Aligned_cols=197 Identities=25% Similarity=0.395 Sum_probs=162.8
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
..++++|+++.|. ++++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 6 PLLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQ 82 (225)
T ss_pred ceEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhc
Confidence 3589999999995 357999999999999999999999999999999999999999999999873
Q ss_pred eEEEccCCccCCCcHHHHhccCCCC-----CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 683 KAYVAQSPWIQSGKIEDNILFGKEM-----NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 683 ~~yv~Q~~~i~~~ti~eNI~~g~~~-----~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
++|++|++.+++.|++||+.++..+ ++++..+.++.+++. .+...+.+.+|||||||||+||||+
T Consensus 83 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~qrv~laral 152 (225)
T PRK10247 83 VSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALP----------DTILTKNIAELSGGEKQRISLIRNL 152 (225)
T ss_pred cEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCC----------hHHhcCCcccCCHHHHHHHHHHHHH
Confidence 6899999999988999999874211 122233333333332 1234677889999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCccccCCEEEEEe-CCeEEEecChH
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPAADLILVMK-DGKITQAGKYN 826 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~~d~i~~l~-~G~i~~~G~~~ 826 (1496)
+++|+++||||||++||+.+...+.+ ++... . .++|+|++||++++++.||++++|+ ++..+++|+|+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 153 QFMPKVLLLDEITSALDESNKHNVNE-IIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999887765 45444 3 3899999999999988899999995 66677778764
No 459
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=6.2e-35 Score=336.69 Aligned_cols=208 Identities=24% Similarity=0.371 Sum_probs=167.3
Q ss_pred cEEEEeeEEEecCC------CCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------
Q 039402 617 ALDIVDGNFSWDIS------SHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~------~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------- 682 (1496)
.++++|+++.|+.. .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37889999999532 1357999999999999999999999999999999999999999999999872
Q ss_pred --------eEEEccCCc--cC-CCcHHHHhccCC----CCCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCC
Q 039402 683 --------KAYVAQSPW--IQ-SGKIEDNILFGK----EMNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINL 743 (1496)
Q Consensus 683 --------~~yv~Q~~~--i~-~~ti~eNI~~g~----~~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~L 743 (1496)
++|++|+|. ++ ..|++||+.++. .++. ++..++++..++.. ...+.++.+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhC
Confidence 699999973 33 469999996542 1222 12223333333321 1235677899
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-C-CcEEEEEccCcCcccc-CCEEEEEeCCeEE
Q 039402 744 SGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-S-SKTVIYVTHQVEFLPA-ADLILVMKDGKIT 820 (1496)
Q Consensus 744 SGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~ 820 (1496)
|||||||++||||++++|+++||||||++||+.+...+.+ ++..+. + ++|+|++||+++.+.. ||++++|++|+++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 230 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILE-LLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIV 230 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEE
Confidence 9999999999999999999999999999999999887765 454443 3 8999999999999875 9999999999999
Q ss_pred EecChHHHHhcCcch
Q 039402 821 QAGKYNDLINSGTDF 835 (1496)
Q Consensus 821 ~~G~~~~l~~~~~~~ 835 (1496)
+.|+.+++......+
T Consensus 231 ~~g~~~~~~~~~~~~ 245 (265)
T TIGR02769 231 EECDVAQLLSFKHPA 245 (265)
T ss_pred EECCHHHHcCCCCHH
Confidence 999999987643333
No 460
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=6.2e-35 Score=366.65 Aligned_cols=212 Identities=25% Similarity=0.398 Sum_probs=185.1
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHh-ccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLR-SRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR-~~i 1323 (1496)
.|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+++ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999999888777665 469
Q ss_pred EEEccccccccc-chhhccCCCCC---CcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLEE---STDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1399 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr 1399 (1496)
+++||+|.+|.+ |+++|+..... ..++++.++++..++.+.. +. ...+||||||||++|||||++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDL-------DS----SAGSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCccc-------cC----ChhhCCHHHHHHHHHHHHHHc
Confidence 999999998876 99999974221 1235677788888775432 22 235799999999999999999
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1400 RSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1400 ~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
+|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999999998864 47899999999999876 99999999999999999999864
No 461
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-35 Score=332.13 Aligned_cols=203 Identities=23% Similarity=0.360 Sum_probs=165.7
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--------------~ 682 (1496)
.++++++++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 478899999995 35799999999999999999999999999999999999999999999987 2
Q ss_pred eEEEccCCccCC-CcHHHHhccCCCC----CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKEM----NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~~----~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
++|++|++.++. .|++||+.++... +.+..+.. ..+.++.+ |..........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDR-----ANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHH-----HHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 689999998876 5999999875321 22111111 11223332 222334667789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
+.+|+++||||||++||+.+...+.+ ++..+ .+|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKR-IIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999888765 44444 358999999999988765 99999999999999999988754
No 462
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-35 Score=330.21 Aligned_cols=205 Identities=21% Similarity=0.315 Sum_probs=165.3
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 488999999985 357999999999999999999999999999999999999999999999873
Q ss_pred eEEEccCCccCC-CcHHHHhccCCC-CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKE-MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 760 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~-~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1496)
++|++|++.++. .|++||+.++.. .+.+...+.++ +-++.++..++ ...+...+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~~l~~-~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIK-----WVYELFPRLHE-RRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHH-----HHHHHHHHHHH-HHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 589999998887 499999988642 12222221111 11111111111 12356789999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 761 SDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
|+++||||||++||+.+.+.+.+.+.....+++|+|++||+++++.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999888876443333458999999999998755 99999999999999999988863
No 463
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-35 Score=334.01 Aligned_cols=204 Identities=27% Similarity=0.409 Sum_probs=168.7
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCC-----ccEEEEcC----------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI-----SGTLKLCG---------- 681 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~-----~G~i~~~g---------- 681 (1496)
.++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYH---KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEEC---CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 588999999995 357999999999999999999999999999999999999987 69998865
Q ss_pred -----eeEEEccCCccCCCcHHHHhccCCCC----CHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 682 -----TKAYVAQSPWIQSGKIEDNILFGKEM----NRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 682 -----~~~yv~Q~~~i~~~ti~eNI~~g~~~----~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
.++|++|++.+++.|++||+.++... .+++ ..++++..++.+.+ .+..++.+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-------KDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-------hhHhhCCcccCCHHHH
Confidence 26899999999988999999986421 1111 22223333332211 1235678899999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEE-LMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999888765 55555568999999999999876 89999999999999999988
Q ss_pred HHhc
Q 039402 828 LINS 831 (1496)
Q Consensus 828 l~~~ 831 (1496)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14249 233 IFSR 236 (251)
T ss_pred HHhC
Confidence 7543
No 464
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=335.54 Aligned_cols=204 Identities=28% Similarity=0.421 Sum_probs=168.6
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g~--------- 682 (1496)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYG---NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 478999999995 3579999999999999999999999999999999999997 47999998773
Q ss_pred ------eEEEccCCccCCCcHHHHhccCCCC----CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 ------KAYVAQSPWIQSGKIEDNILFGKEM----NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~ti~eNI~~g~~~----~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|++.+++.|++||+.++... ++ ++..++++.+++.++. ....++.+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 5899999999989999999876321 11 2233344444442211 1123567789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
||++||||++++|+++||||||++||+.+.+.+.+ ++..+.+++|+|++||+++++.. ||+|++|++|++++.|+.++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEE-TLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHH-HHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888765 45555567999999999999765 99999999999999999988
Q ss_pred HHhc
Q 039402 828 LINS 831 (1496)
Q Consensus 828 l~~~ 831 (1496)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14251 233 MFIA 236 (251)
T ss_pred HHhC
Confidence 7643
No 465
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-35 Score=336.07 Aligned_cols=202 Identities=23% Similarity=0.369 Sum_probs=167.0
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|+++.|+.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999632 246999999999999999999999999999999999999999999999883 5
Q ss_pred EEEccCCc--cCCCcHHHHhccCCC---CCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 684 AYVAQSPW--IQSGKIEDNILFGKE---MNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 684 ~yv~Q~~~--i~~~ti~eNI~~g~~---~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+|++|+|+ ++..|+++|+.++.. ...+. ..++++..++.+ ....++.+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLE-----------RADYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCch-----------hhhCCcccCCHHHHHHHHHH
Confidence 89999995 456689999988632 22222 223333333322 23456789999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-C-CcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHHHhc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-S-SKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||++.+|+++||||||++||+.+.+.+++ +++.+. + ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLD-LVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999988875 444443 3 7999999999998877999999999999999999887643
No 466
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-35 Score=331.91 Aligned_cols=199 Identities=28% Similarity=0.417 Sum_probs=164.4
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYG---AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEEC---CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 368899999995 357999999999999999999999999999999999999999999999763
Q ss_pred -----eEEEccCCccCC-CcHHHHhccCC----CCCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 -----KAYVAQSPWIQS-GKIEDNILFGK----EMNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 -----~~yv~Q~~~i~~-~ti~eNI~~g~----~~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|++.++. .|++|||.++. ....+ +..+.++..++ ....+....+||||||
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~ 147 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRL-----------KPYADRFPLHLSGGQQ 147 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHH
Confidence 589999998876 49999997421 11111 12222232222 2334566789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
||++||||++.+|+++||||||++||+.+...+.+ +++... +++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~ 226 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVS-IIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDAS 226 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999888875 454443 58999999999999865 9999999999999999988
Q ss_pred HHHh
Q 039402 827 DLIN 830 (1496)
Q Consensus 827 ~l~~ 830 (1496)
++.+
T Consensus 227 ~~~~ 230 (242)
T PRK11124 227 CFTQ 230 (242)
T ss_pred HhcC
Confidence 7643
No 467
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-35 Score=333.66 Aligned_cols=203 Identities=28% Similarity=0.402 Sum_probs=168.0
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g~--------- 682 (1496)
.++++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|..++ ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYG---DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEEC---CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 478999999995 35799999999999999999999999999999999998763 6999999862
Q ss_pred ------eEEEccCCccCCCcHHHHhccCCCC----CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 ------KAYVAQSPWIQSGKIEDNILFGKEM----NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~ti~eNI~~g~~~----~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|++.+++.|++||+.++... +. ++..+.++.+++.+++. ...++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHHH
Confidence 5899999998889999999886321 11 22233344444432222 234567889999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
||++||||++.+|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEE-LIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888764 55555568999999999998765 99999999999999999888
Q ss_pred HHh
Q 039402 828 LIN 830 (1496)
Q Consensus 828 l~~ 830 (1496)
+..
T Consensus 232 ~~~ 234 (250)
T PRK14240 232 LFT 234 (250)
T ss_pred HHh
Confidence 754
No 468
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=338.06 Aligned_cols=199 Identities=24% Similarity=0.364 Sum_probs=164.7
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQ---DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcC---CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 67899999995 357999999999999999999999999999999999999999999998773
Q ss_pred eEEEccCCc--cCCCcHHHHhccCC---CCCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 KAYVAQSPW--IQSGKIEDNILFGK---EMNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 ~~yv~Q~~~--i~~~ti~eNI~~g~---~~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++|++|++. ++..|+.||+.++. ..+.++ ..++++..++.+. ......+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHF-----------RHQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhH-----------hcCCchhCCHHHHHHHHH
Confidence 589999985 46678999998742 122222 2233444443221 235678999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
||||+.+|+++||||||++||+.+...+.+ ++..+ .+++|+|++||+++.+.. ||++++|++|++++.|+.+++...
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIA-IIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999888875 44443 358999999999999865 999999999999999999887543
No 469
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-35 Score=337.53 Aligned_cols=203 Identities=27% Similarity=0.397 Sum_probs=170.3
Q ss_pred cEEEEeeEEEecCCC---CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------
Q 039402 617 ALDIVDGNFSWDISS---HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~---~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~----------- 682 (1496)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 588999999996321 357999999999999999999999999999999999999999999999872
Q ss_pred ---eEEEccCCc--cCCCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 683 ---KAYVAQSPW--IQSGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 683 ---~~yv~Q~~~--i~~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
++|++|+|. ++..|+.||+.|+.. .+. ++.+++++.+++.+. .+....+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEY-----------RRHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhH-----------hhCCcccCCHHHHHH
Confidence 589999985 566789999998632 222 334445555555433 345568999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCccccCCEEEEEeCCeEEEecChHHH
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPAADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~G~~~~l 828 (1496)
++||||++.+|+++||||||++||+.+...+.+ ++..+ . .|+|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVN-TIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999998875 45544 3 38999999999999877999999999999999999988
Q ss_pred Hhc
Q 039402 829 INS 831 (1496)
Q Consensus 829 ~~~ 831 (1496)
...
T Consensus 232 ~~~ 234 (280)
T PRK13633 232 FKE 234 (280)
T ss_pred hcC
Confidence 653
No 470
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-35 Score=333.83 Aligned_cols=204 Identities=25% Similarity=0.402 Sum_probs=170.7
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g~--------- 682 (1496)
.++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|..+| ++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 578999999995 35799999999999999999999999999999999999875 7999999762
Q ss_pred ------eEEEccCCccCCCcHHHHhccCCCC----CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 ------KAYVAQSPWIQSGKIEDNILFGKEM----NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~ti~eNI~~g~~~----~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|++.++..|++||+.|+... +. ++..++++.+++.+++. ...+....+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 5899999999999999999876321 11 22334555555533222 123567789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
||++||||++.+|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIED-LMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 99999999999999999999999999999888865 55555557999999999999876 99999999999999999988
Q ss_pred HHhc
Q 039402 828 LINS 831 (1496)
Q Consensus 828 l~~~ 831 (1496)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14270 233 IFLE 236 (251)
T ss_pred HhcC
Confidence 7644
No 471
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=368.25 Aligned_cols=212 Identities=23% Similarity=0.343 Sum_probs=181.9
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCC--CccEEEECCeeCCCCChHH-Hhc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEP--AAGQILIDGIDISLIGLHD-LRS 1321 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep--~~G~I~IDG~dI~~i~l~~-LR~ 1321 (1496)
-|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+..+ .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 5999999999964 3599999999999999999999999999999999999996 8999999999998777655 467
Q ss_pred ccEEEccccccccc-chhhccCCCC------CCc----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 039402 1322 RLSIIPQDPVMFEG-TVRSNLDPLE------EST----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1390 (1496)
Q Consensus 1322 ~i~iIpQdp~LF~g-TIR~NLdp~~------~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQl 1390 (1496)
+++|+||+|.+|.. |+++|+.... ..+ .+++.+++++.++.+. ++. ...+||||||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~----~~~~LSgGqkqr 151 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDIN-------PAT----PVGNLGLGQQQL 151 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCC-------ccc----chhhCCHHHHHH
Confidence 89999999998875 9999997421 112 2346677777766432 222 235799999999
Q ss_pred HHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHh
Q 039402 1391 VCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLL 1468 (1496)
Q Consensus 1391 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll 1468 (1496)
++|||||+++|+|||||||||+||+.+...+.+.|++.. ++.|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 152 VEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 999999999999999999999999999999999998864 46899999999999876 9999999999999999998875
Q ss_pred h
Q 039402 1469 E 1469 (1496)
Q Consensus 1469 ~ 1469 (1496)
.
T Consensus 232 ~ 232 (506)
T PRK13549 232 E 232 (506)
T ss_pred H
Confidence 3
No 472
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-35 Score=336.51 Aligned_cols=200 Identities=26% Similarity=0.357 Sum_probs=166.5
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------- 682 (1496)
..++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 10 ~~l~i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 86 (265)
T PRK10575 10 TTFALRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARK 86 (265)
T ss_pred ceEEEeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhh
Confidence 4689999999995 357999999999999999999999999999999999999999999999883
Q ss_pred eEEEccCCccCC-CcHHHHhccCCC--------CC---HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKE--------MN---RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~--------~~---~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
++|++|++.++. .|+.||+.++.. .. +++..+.++.+++.+. ......+||||||||
T Consensus 87 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qr 155 (265)
T PRK10575 87 VAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPL-----------AHRLVDSLSGGERQR 155 (265)
T ss_pred eEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCCHHHHHH
Confidence 689999976654 599999987531 11 1233444555554332 244567899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hC-CcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LS-SKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
++||||++.+|+++||||||++||+.+.+.+.+ ++..+ .+ ++|+|++||+++++.. ||+|++|++|++++.|+.++
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~~~~-~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~ 234 (265)
T PRK10575 156 AWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLA-LVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAE 234 (265)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHH
Confidence 999999999999999999999999999888765 44444 33 7999999999999865 99999999999999999888
Q ss_pred HHh
Q 039402 828 LIN 830 (1496)
Q Consensus 828 l~~ 830 (1496)
+..
T Consensus 235 ~~~ 237 (265)
T PRK10575 235 LMR 237 (265)
T ss_pred hcC
Confidence 754
No 473
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.1e-35 Score=327.73 Aligned_cols=189 Identities=26% Similarity=0.384 Sum_probs=155.9
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|+++.|+. .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 367899999852 257999999999999999999999999999999999999999999999873
Q ss_pred -eEEEccCCccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 -KAYVAQSPWIQS-GKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 -~~yv~Q~~~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++|++|++.++. .|++||+.++.. .+. ++..+.++.+++.+. ......+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHK-----------HRALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhcCHHHHHHHHH
Confidence 689999998887 599999987532 122 223344444444322 234567999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeE
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKI 819 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 819 (1496)
|||++.+|+++||||||++||+++.+.+.+.+.+...+++|+|++||+++.+.. ||++++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999888875443333458999999999999875 999999999974
No 474
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-35 Score=325.46 Aligned_cols=189 Identities=29% Similarity=0.437 Sum_probs=156.8
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------eEEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------~~yv 686 (1496)
++++|++++|+. +. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 75 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSML 75 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEE
Confidence 468899999852 22 3999999999999999999999999999999999999999999883 6999
Q ss_pred ccCCccCCC-cHHHHhccCCCC-------CHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHc
Q 039402 687 AQSPWIQSG-KIEDNILFGKEM-------NRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALY 758 (1496)
Q Consensus 687 ~Q~~~i~~~-ti~eNI~~g~~~-------~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1496)
+|++.++.. |++||+.++... ++++..++++.+++.+.. .....+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~ia~al~ 144 (211)
T cd03298 76 FQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLE-----------KRLPGELSGGERQRVALARVLV 144 (211)
T ss_pred ecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHHHHHHHHh
Confidence 999998865 999999876421 122344455555554332 3455789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEec
Q 039402 759 QDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAG 823 (1496)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G 823 (1496)
.+|+++||||||++||+++...+.+. +..+ . .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 ~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 145 RDKPVLLLDEPFAALDPALRAEMLDL-VLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999888654 4444 3 38999999999999876 9999999999998754
No 475
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-35 Score=323.97 Aligned_cols=187 Identities=31% Similarity=0.437 Sum_probs=161.2
Q ss_pred ceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-----------------eEEEccCCccC-CCc
Q 039402 635 TLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------------KAYVAQSPWIQ-SGK 696 (1496)
Q Consensus 635 ~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-----------------~~yv~Q~~~i~-~~t 696 (1496)
-++|+||+|+.||+.+|.|-||||||||++++.++++|++|+|.++|. +++|+|+.-++ ..|
T Consensus 43 Gv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrt 122 (386)
T COG4175 43 GVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRT 122 (386)
T ss_pred eeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchh
Confidence 478999999999999999999999999999999999999999999984 48999998775 469
Q ss_pred HHHHhccCCCCC----HHH---HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecC
Q 039402 697 IEDNILFGKEMN----RER---YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDP 769 (1496)
Q Consensus 697 i~eNI~~g~~~~----~~~---~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep 769 (1496)
|.||+.||.+.. +++ ..+.++..+|+..- ...+.+||||+||||.|||||..||||+|+|||
T Consensus 123 Vl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~-----------~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 123 VLENVAFGLEVQGVPKAEREERALEALELVGLEGYA-----------DKYPNELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred HhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhh-----------hcCcccccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999997632 333 33445555554433 355689999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCcc-ccCCEEEEEeCCeEEEecChHHHHhcC
Q 039402 770 FSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFL-PAADLILVMKDGKITQAGKYNDLINSG 832 (1496)
Q Consensus 770 ~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~G~~~~l~~~~ 832 (1496)
||||||--...+-+++++...+ +||+|+||||+++. +..|||.+|+||+|++.|+++|++.+.
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHHHcCc
Confidence 9999999999887777755433 79999999999885 569999999999999999999998654
No 476
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.6e-35 Score=344.54 Aligned_cols=188 Identities=22% Similarity=0.335 Sum_probs=157.9
Q ss_pred CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------eEEEccCCccCCC-cHH
Q 039402 632 HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAYVAQSPWIQSG-KIE 698 (1496)
Q Consensus 632 ~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------~~yv~Q~~~i~~~-ti~ 698 (1496)
++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|++|++.++.. |++
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHH
Confidence 357999999999999999999999999999999999999999999999883 6999999988764 999
Q ss_pred HHhccCCC---CC----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCCCEEEEecCCC
Q 039402 699 DNILFGKE---MN----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFS 771 (1496)
Q Consensus 699 eNI~~g~~---~~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~s 771 (1496)
||+.+... .+ +++..++++.+++.+ ....+..+||||||||++||||++++|+++||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGE-----------AADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-----------HhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99987421 12 123344455544432 2245678999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 772 AVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 772 aLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
+||+.+.+.+.+.+.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++.+
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 999999888876443333458999999999999875 99999999999999999988764
No 477
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=335.79 Aligned_cols=202 Identities=21% Similarity=0.292 Sum_probs=167.9
Q ss_pred CccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------
Q 039402 615 ETALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1496)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------ 682 (1496)
...+.++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~~~l~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (265)
T PRK10253 5 VARLRGEQLTLGYG---KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVAR 81 (265)
T ss_pred ccEEEEEEEEEEEC---CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhh
Confidence 34689999999996 357999999999999999999999999999999999999999999999873
Q ss_pred -eEEEccCCccC-CCcHHHHhccCC-CC-------CH---HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHH
Q 039402 683 -KAYVAQSPWIQ-SGKIEDNILFGK-EM-------NR---ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 749 (1496)
Q Consensus 683 -~~yv~Q~~~i~-~~ti~eNI~~g~-~~-------~~---~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 749 (1496)
++|++|++.++ +.|++||+.++. +. .+ ++..++++..++.+ .....+.+|||||||
T Consensus 82 ~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~Gq~q 150 (265)
T PRK10253 82 RIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITH-----------LADQSVDTLSGGQRQ 150 (265)
T ss_pred heEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHH-----------HhcCCcccCChHHHH
Confidence 68999999876 469999998752 11 11 22333444444432 234677899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHH
Q 039402 750 RIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-SSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~ 827 (1496)
|++||||++.+|+++||||||++||+.+...+.+.+..... .++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 151 rv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 230 (265)
T PRK10253 151 RAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKE 230 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999988764433223 37899999999998765 99999999999999999888
Q ss_pred HHh
Q 039402 828 LIN 830 (1496)
Q Consensus 828 l~~ 830 (1496)
+..
T Consensus 231 ~~~ 233 (265)
T PRK10253 231 IVT 233 (265)
T ss_pred Hhh
Confidence 754
No 478
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.7e-35 Score=328.11 Aligned_cols=188 Identities=23% Similarity=0.389 Sum_probs=155.6
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|++++|+ +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~--~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYP--GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeC--CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 67899999994 2357999999999999999999999999999999999999999999998772
Q ss_pred -eEEEccCCccCC-CcHHHHhccCCC---CC----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 -KAYVAQSPWIQS-GKIEDNILFGKE---MN----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 -~~yv~Q~~~i~~-~ti~eNI~~g~~---~~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++|++|+|.++. .|++||+.++.. .+ +++.++.++..++.+. ......+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHK-----------ADAFPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHHHH
Confidence 589999999885 699999987521 22 1233344444444322 234557999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCe
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGK 818 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 818 (1496)
|||++.+|+++||||||++||+.+...+.+.+.....+++|+|++||+++++.. ||++++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999988876444333358999999999999876 99999999985
No 479
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=368.67 Aligned_cols=212 Identities=22% Similarity=0.313 Sum_probs=182.5
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHH-hccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i 1323 (1496)
.|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 359999999999999999999999999999999999999999999999999988776554 4679
Q ss_pred EEEccccccccc-chhhccCCCC-------CC---c----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLE-------ES---T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1388 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~-------~~---s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1388 (1496)
+++||++.+|.+ |+++|+.... .. + ++++.++++++++.+. +|.+ ..+||||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-------~~~~----~~~LSgG~~ 151 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVD-------LDEK----VANLSISHK 151 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCC-------cccc----hhhCCHHHH
Confidence 999999988876 9999996311 10 1 2346677777776432 2322 357999999
Q ss_pred HHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhh
Q 039402 1389 QLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPAN 1466 (1496)
Q Consensus 1389 Qll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~ 1466 (1496)
||++|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|++++
T Consensus 152 qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 152 QMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhh
Confidence 99999999999999999999999999999999999998864 46899999999999976 99999999999999999998
Q ss_pred Hhh
Q 039402 1467 LLE 1469 (1496)
Q Consensus 1467 Ll~ 1469 (1496)
++.
T Consensus 232 ~~~ 234 (510)
T PRK09700 232 VSN 234 (510)
T ss_pred CCH
Confidence 764
No 480
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=9.7e-35 Score=327.96 Aligned_cols=195 Identities=27% Similarity=0.368 Sum_probs=159.8
Q ss_pred cEEEEeeEEEecCCCC-CCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC--------------
Q 039402 617 ALDIVDGNFSWDISSH-NPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 681 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g-------------- 681 (1496)
.++++|++++|+.... .++++|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999963221 3599999999999999999999999999999999999999999999876
Q ss_pred ---eeEEEccCCccCC-CcHHHHhccCCC---CC----HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 682 ---TKAYVAQSPWIQS-GKIEDNILFGKE---MN----RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 682 ---~~~yv~Q~~~i~~-~ti~eNI~~g~~---~~----~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
.++|++|++.++. .|++||+.++.. .+ +++..+.++.+++.+. ......+||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKR-----------LDHLPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhCChhhCCHHHHHH
Confidence 2689999998876 499999986421 12 2233444555554332 234567899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCccccCCEEEEEeCCeEEEe
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLPAADLILVMKDGKITQA 822 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 822 (1496)
++||||++.+|+++||||||++||+.+...+.+.+.+...+ ++|||++||+++++..||++++|++|++++.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999988886544333233 7899999999998877999999999999753
No 481
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=8e-35 Score=333.57 Aligned_cols=200 Identities=29% Similarity=0.378 Sum_probs=165.0
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 1 i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFG---ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeC---CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 46889999995 357999999999999999999999999999999999999999999998762
Q ss_pred -----------eEEEccCCccCC-CcHHHHhccCCC----CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCC
Q 039402 683 -----------KAYVAQSPWIQS-GKIEDNILFGKE----MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGIN 742 (1496)
Q Consensus 683 -----------~~yv~Q~~~i~~-~ti~eNI~~g~~----~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~ 742 (1496)
++|++|++.++. .|+.||+.++.. .+.+ +..+.++..++ ....++.+.+
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGL-----------ADKADHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hhHhhcChhh
Confidence 689999998875 799999987521 2221 22233333333 2234567789
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCccc-cCCEEEEEeCCeEE
Q 039402 743 LSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLP-AADLILVMKDGKIT 820 (1496)
Q Consensus 743 LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~ 820 (1496)
||||||||++||||++++|+++||||||++||+.+...+++.+.+...+ ++|+|++||+++.+. .||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999988887543333333 899999999999986 49999999999999
Q ss_pred EecChHHHHhc
Q 039402 821 QAGKYNDLINS 831 (1496)
Q Consensus 821 ~~G~~~~l~~~ 831 (1496)
+.|+++++.+.
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999888643
No 482
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.2e-35 Score=326.96 Aligned_cols=187 Identities=34% Similarity=0.506 Sum_probs=153.4
Q ss_pred EEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eEEE
Q 039402 620 IVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYV 686 (1496)
Q Consensus 620 ~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~yv 686 (1496)
++|+++.|+.. .+++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|. ++|+
T Consensus 2 ~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 2 LKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred ceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 57888888521 257999999999999999999999999999999999999999999999873 5899
Q ss_pred ccCCc--cCCCcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 687 AQSPW--IQSGKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 687 ~Q~~~--i~~~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
+|++. +++.|++||+.++.. .+.. +..+.++..++.+ ...++..+||||||||++||||+
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEG-----------LRDRSPFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHh-----------hhcCCcccCCHHHHHHHHHHHHH
Confidence 99983 567899999987532 2221 2233344333322 23466789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCe
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGK 818 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 818 (1496)
+.+|+++||||||++||+.+...+.+.+.+...+++|+|++||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999998876543333358999999999999876 99999999985
No 483
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-35 Score=332.92 Aligned_cols=204 Identities=26% Similarity=0.380 Sum_probs=167.0
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g~--------- 682 (1496)
.++++|++++|+ ++++++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFG---QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEEC---CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 478999999995 35799999999999999999999999999999999999974 7999999873
Q ss_pred ----eEEEccCCccC-CCcHHHHhccCCCC-----CHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHH
Q 039402 683 ----KAYVAQSPWIQ-SGKIEDNILFGKEM-----NRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQK 748 (1496)
Q Consensus 683 ----~~yv~Q~~~i~-~~ti~eNI~~g~~~-----~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQk 748 (1496)
++|++|++.++ +.|++||+.++... ..+ +..+.++.+++.+.+ .........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-------KDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCCcccCCHHHH
Confidence 58999999754 67999999876321 111 223334444442211 1223566789999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHH
Q 039402 749 QRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYND 827 (1496)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~ 827 (1496)
|||+||||++++|+++||||||++||+.+...+.+. +....+++|+|++||+++.+. .||++++|++|++++.|+.++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESL-FLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTRE 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHH
Confidence 999999999999999999999999999999888754 444456899999999999986 499999999999999999988
Q ss_pred HHhc
Q 039402 828 LINS 831 (1496)
Q Consensus 828 l~~~ 831 (1496)
+.+.
T Consensus 232 ~~~~ 235 (250)
T PRK14247 232 VFTN 235 (250)
T ss_pred HHcC
Confidence 7643
No 484
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.7e-35 Score=341.94 Aligned_cols=199 Identities=23% Similarity=0.407 Sum_probs=168.3
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe------------eEE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 685 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~------------~~y 685 (1496)
++++|++++|. ++.+|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|. ++|
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEE
Confidence 78999999995 357999999999999999999999999999999999999999999999883 699
Q ss_pred EccCCccCCC-cHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHH
Q 039402 686 VAQSPWIQSG-KIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARAL 757 (1496)
Q Consensus 686 v~Q~~~i~~~-ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl 757 (1496)
+||++.++.. |++||+.+... .+. ++.+++++..++. ...+++..+||||||||++||||+
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLR-----------PEQHKKIGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-----------hHhcCchhhCCHHHHHHHHHHHHH
Confidence 9999998865 99999975321 121 2233333333332 234567789999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 758 YQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
+++|+++||||||++||+.+.+.+++ .+..+.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~-~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRN-VIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999988875 45555568999999999998876 999999999999999999998643
No 485
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.9e-35 Score=366.57 Aligned_cols=212 Identities=23% Similarity=0.315 Sum_probs=181.0
Q ss_pred eEEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHH-Hhccc
Q 039402 1245 KIDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRSRL 1323 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1323 (1496)
-|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999997765544 46789
Q ss_pred EEEccccccccc-chhhccCCCC-------CCcH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 039402 1324 SIIPQDPVMFEG-TVRSNLDPLE-------ESTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1391 (1496)
Q Consensus 1324 ~iIpQdp~LF~g-TIR~NLdp~~-------~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll 1391 (1496)
+++||+|.+|.. |+++|+.... ..+. +++.+++++.++.+. +|.+ ..+||||||||+
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~----~~~LSgG~~qrv 150 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFS-------SDKL----VGELSIGEQQMV 150 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCC-------ccCc----hhhCCHHHHHHH
Confidence 999999988875 9999997421 1121 345667777776432 2222 346999999999
Q ss_pred HHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEEeCCeEeEecChhhHhh
Q 039402 1392 CLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLLNHGLIEEFDNPANLLE 1469 (1496)
Q Consensus 1392 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~IvE~g~p~~Ll~ 1469 (1496)
+|||||+.+|++|+|||||++||+.+.+.+.+.|++.. .+.|||+|+|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 151 EIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred HHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999999999998753 46899999999999876 99999999999999999988753
No 486
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-35 Score=337.65 Aligned_cols=200 Identities=32% Similarity=0.492 Sum_probs=166.6
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe---------------
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------------- 682 (1496)
++++|++++|+. .+++++|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 678999999952 346999999999999999999999999999999999999999999999872
Q ss_pred eEEEccCC--ccCCCcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHH
Q 039402 683 KAYVAQSP--WIQSGKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQI 753 (1496)
Q Consensus 683 ~~yv~Q~~--~i~~~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~L 753 (1496)
++|++|+| .++..|++|||.++.. ... ++..++++.+++.. .....+.+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEG-----------FENKPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCch-----------hhcCChhhCCHHHHHHHHH
Confidence 58999997 5678899999987531 222 22333444444421 1235578999999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 039402 754 ARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|||++.+|+++||||||++||+.+...+.+. +..+ .+++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKL-LYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999888754 4444 358999999999999874 999999999999999999887643
No 487
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=334.51 Aligned_cols=204 Identities=26% Similarity=0.401 Sum_probs=170.5
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g~--------- 682 (1496)
.++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 10 ~l~i~~v~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYG---SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEEC---CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 589999999995 3479999999999999999999999999999999999976 47999998772
Q ss_pred ------eEEEccCCccCCCcHHHHhccCCCC---C---HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHH
Q 039402 683 ------KAYVAQSPWIQSGKIEDNILFGKEM---N---RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQR 750 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~ti~eNI~~g~~~---~---~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqR 750 (1496)
++|++|++.+++.|++||+.++... . +++..++++.+++.+++. ...++.+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHH
Confidence 6899999999888999999886421 1 123334455555543332 12356788999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEe---------CCeEE
Q 039402 751 IQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMK---------DGKIT 820 (1496)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~---------~G~i~ 820 (1496)
++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~ 238 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEE-LMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV 238 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999888764 55555557899999999999865 99999998 89999
Q ss_pred EecChHHHHhc
Q 039402 821 QAGKYNDLINS 831 (1496)
Q Consensus 821 ~~G~~~~l~~~ 831 (1496)
+.|+.+++.+.
T Consensus 239 ~~~~~~~~~~~ 249 (264)
T PRK14243 239 EFDRTEKIFNS 249 (264)
T ss_pred EeCCHHHHHhC
Confidence 99999998654
No 488
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=336.51 Aligned_cols=201 Identities=30% Similarity=0.463 Sum_probs=167.6
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------e
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~ 683 (1496)
.++++|++++|+. .+++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 4788999999952 346999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCc--cCCCcHHHHhccCCC---CCHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHH
Q 039402 684 AYVAQSPW--IQSGKIEDNILFGKE---MNRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 754 (1496)
Q Consensus 684 ~yv~Q~~~--i~~~ti~eNI~~g~~---~~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LA 754 (1496)
+||+|+|. +++.|++||+.++.. .+.+ ++++.++.+++.+. .......||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEEL-----------RDRVPHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhH-----------hcCCcccCCHHHHHHHHHH
Confidence 89999983 667899999987532 3332 23344444444332 3455679999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hC-CcEEEEEccCcCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 039402 755 RALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LS-SKTVIYVTHQVEFLP-AADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|||+.+|+++||||||++||+.+...+.+. +..+ .+ ++|+|++||+++++. .||++++|++|++++.|+++++...
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDF-LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 999999999999999999999998887654 4443 33 899999999999986 5999999999999999999988653
No 489
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4.8e-35 Score=330.48 Aligned_cols=200 Identities=27% Similarity=0.397 Sum_probs=156.5
Q ss_pred EEEEeeEEEecCCC-CCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcC---------------
Q 039402 618 LDIVDGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1496)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g--------------- 681 (1496)
++++|++++|+..+ ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 67899999995311 12799999999999999999999999999999999999999999999977
Q ss_pred -eeEEEccCCc--cC-CCcHHHHhccCCC-----CCHHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 682 -TKAYVAQSPW--IQ-SGKIEDNILFGKE-----MNRERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 682 -~~~yv~Q~~~--i~-~~ti~eNI~~g~~-----~~~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
.++|++|++. ++ ..|++||+.++.. .+++..+++. .+.++.+... ....++...+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~-~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGVGLP-EEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHCCCC-hhHhhCCchhcCHHHHHHHH
Confidence 2689999983 33 5799999976421 1111111110 1122222211 12346777899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCcCccc-cCCEEEEEeCCeEEEec
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLS-SKTVIYVTHQVEFLP-AADLILVMKDGKITQAG 823 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~G 823 (1496)
||||++.+|+++||||||++||+.+.+.+.+.+.+...+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999988886544333333 899999999999987 49999999999998754
No 490
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.6e-35 Score=296.03 Aligned_cols=198 Identities=30% Similarity=0.448 Sum_probs=176.1
Q ss_pred eEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEEEcccccc
Q 039402 1253 VRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSIIPQDPVM 1332 (1496)
Q Consensus 1253 ~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~L 1332 (1496)
++|.....++|+|+||++.+||.++|.||||||||||++.+.-+..|++|.++..|.|+++++++.+|++++|+-|.|.|
T Consensus 9 ~~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paL 88 (223)
T COG4619 9 VGYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPAL 88 (223)
T ss_pred HHhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccc
Confidence 35666666799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhccC-CCC----CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCEEEEE
Q 039402 1333 FEGTVRSNLD-PLE----ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRSKILMLD 1407 (1496)
Q Consensus 1333 F~gTIR~NLd-p~~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~~~ILiLD 1407 (1496)
|.+||.+||- |.. ..+.+.-.+-|+++++.+.+-+ .+..+||||||||++|+|-|---|+||+||
T Consensus 89 fg~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~~~~L~----------k~it~lSGGE~QriAliR~Lq~~P~ILLLD 158 (223)
T COG4619 89 FGDTVEDNLIFPWQIRNRRPDRAAALDLLARFALPDSILT----------KNITELSGGEKQRIALIRNLQFMPKILLLD 158 (223)
T ss_pred cccchhhccccchHHhccCCChHHHHHHHHHcCCchhhhc----------chhhhccchHHHHHHHHHHhhcCCceEEec
Confidence 9999999985 532 2334455677888887765533 345789999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEccCcch-hcccCEEEEEeCCeEeE
Q 039402 1408 EATASVDTATDNLIQQTLRQHF--SDCTVLTIAHRITS-VIDSDLVLLLNHGLIEE 1460 (1496)
Q Consensus 1408 EaTsslD~~Td~~Iq~~I~~~f--~~~TVI~IAHRl~t-i~~~DrIlVL~~G~IvE 1460 (1496)
|+||+||+.+.+.|.+.|..++ ++..|+.|||+-.. +..+||++-+..|++-|
T Consensus 159 E~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 159 EITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred CchhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 9999999999999999999988 46899999999987 78899999999998643
No 491
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.9e-35 Score=323.30 Aligned_cols=194 Identities=26% Similarity=0.371 Sum_probs=168.3
Q ss_pred EEEEeEEeEeCCCCCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCCCCChHHHhcccEE
Q 039402 1246 IDLLDLQVRYAPQMPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRSRLSI 1325 (1496)
Q Consensus 1246 I~f~nvs~~Y~~~~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1325 (1496)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999964 35999999999999999999999999999999999999999999999999987654 457788999
Q ss_pred Ecccccccc-cchhhccCCCC----CCcHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccC
Q 039402 1326 IPQDPVMFE-GTVRSNLDPLE----ESTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKR 1400 (1496)
Q Consensus 1326 IpQdp~LF~-gTIR~NLdp~~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQll~LARALLr~ 1400 (1496)
+||++.++. .|+++|+.... ...++++.++++..++.+..... ...||+|||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFEDVP-----------VRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhhCC-----------hhhcCHHHHHHHHHHHHHhcC
Confidence 999998886 59999996321 13456788899999987554322 357999999999999999999
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEccCcchhcc-cCEEEEE
Q 039402 1401 SKILMLDEATASVDTATDNLIQQTLRQHF-SDCTVLTIAHRITSVID-SDLVLLL 1453 (1496)
Q Consensus 1401 ~~ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TVI~IAHRl~ti~~-~DrIlVL 1453 (1496)
|+||+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999998864 46899999999999955 5677766
No 492
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9.1e-35 Score=333.81 Aligned_cols=198 Identities=24% Similarity=0.388 Sum_probs=164.4
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe-------------eE
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------~~ 684 (1496)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|. ++
T Consensus 2 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAG---GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEEC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 67899999995 357999999999999999999999999999999999999999999999872 68
Q ss_pred EEccCCcc-CCCcHHHHhccCCC-C-------C---HHHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHH
Q 039402 685 YVAQSPWI-QSGKIEDNILFGKE-M-------N---RERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQ 752 (1496)
Q Consensus 685 yv~Q~~~i-~~~ti~eNI~~g~~-~-------~---~~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~ 752 (1496)
|++|++.+ +..|++||+.++.. . . .++..++++.+++. ....+.+.+||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELS-----------HLADRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcH-----------hhhcCCcccCCHHHHHHHH
Confidence 99999854 56799999988631 1 0 11223333333332 2235667899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 039402 753 IARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGL-LSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDLIN 830 (1496)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l~~ 830 (1496)
||||++.+|+++||||||++||+.+...+.+ +++.+ .+++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLA-LVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999888865 45444 348999999999999864 99999999999999999888753
No 493
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=335.27 Aligned_cols=205 Identities=24% Similarity=0.395 Sum_probs=169.0
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcCe--------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT-------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g~-------- 682 (1496)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|.
T Consensus 23 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 23 VVFDTQNLNLWYG---EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred eEEEEeeeEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 3689999999995 3579999999999999999999999999999999999987 69999998872
Q ss_pred -------eEEEccCCccCCCcHHHHhccCCC---C-CHHHH----HHHHHHhchhhHHHhccCCCcccccCCCCCCChHH
Q 039402 683 -------KAYVAQSPWIQSGKIEDNILFGKE---M-NRERY----NAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 683 -------~~yv~Q~~~i~~~ti~eNI~~g~~---~-~~~~~----~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 747 (1496)
++|++|++.++..|++||+.++.. . +++.. .+.++..++.+++ ....++.+.+|||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-------~~~~~~~~~~LSgGe 172 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDEL-------KDRLHDNAYGLSGGQ 172 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchH-------HHHHhcCcccCCHHH
Confidence 689999999998899999987532 1 11111 1222222221122 123467788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||++|||||+.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++++.. ||++++|++|++++.|+++
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~ 251 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEE-LVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTD 251 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888865 55555568999999999999865 9999999999999999998
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
++...
T Consensus 252 ~~~~~ 256 (271)
T PRK14238 252 KIFSN 256 (271)
T ss_pred HHHcC
Confidence 88654
No 494
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=374.47 Aligned_cols=223 Identities=22% Similarity=0.328 Sum_probs=182.7
Q ss_pred eEEEEeEEeEeCCC--CCccceeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCeeCC----------
Q 039402 1245 KIDLLDLQVRYAPQ--MPLVLQGISCTFPGGEKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS---------- 1312 (1496)
Q Consensus 1245 ~I~f~nvs~~Y~~~--~~~vLk~iS~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~---------- 1312 (1496)
-|+++|++++|... ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCCh---HHHh-cccEEEcccc--cccc-cchhhccCCC----CCCc----HHHHHHHHHHcCCcHHHHhccCCcccccc
Q 039402 1313 LIGL---HDLR-SRLSIIPQDP--VMFE-GTVRSNLDPL----EEST----DEQIWEALDKCQLGDEVRKKEGKLDSKVT 1377 (1496)
Q Consensus 1313 ~i~l---~~LR-~~i~iIpQdp--~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~ 1377 (1496)
+.+. ..+| ++|++|+|+| .++. -||++|+... ...+ ++++.++|+.+++.+.- .-++
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----~~~~---- 163 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQ----TILS---- 163 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChh----hHHh----
Confidence 2222 2344 5799999999 5776 4999999621 1122 24577788888874310 0112
Q ss_pred cCCCCCCchHHHHHHHHHHHccCCCEEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEccCcchhcc-cCEEEEEe
Q 039402 1378 ENGENWSMGQRQLVCLGRVLLKRSKILMLDEATASVDTATDNLIQQTLRQHFS--DCTVLTIAHRITSVID-SDLVLLLN 1454 (1496)
Q Consensus 1378 e~G~nLS~GQrQll~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~ 1454 (1496)
....+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||||+||+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 23357999999999999999999999999999999999999999999998652 7899999999999876 99999999
Q ss_pred CCeEeEecChhhHhhcCCcHH
Q 039402 1455 HGLIEEFDNPANLLENKSSSF 1475 (1496)
Q Consensus 1455 ~G~IvE~g~p~~Ll~~~~s~F 1475 (1496)
+|+|++.|+++++++.+...|
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~ 264 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPY 264 (623)
T ss_pred CCeecccCCHHHhhcCCCChh
Confidence 999999999999986554333
No 495
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-35 Score=311.55 Aligned_cols=206 Identities=27% Similarity=0.430 Sum_probs=172.9
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~-------------- 682 (1496)
.++++|++..|. ..++|++|||++++||+++++|+||+||||||++|+|..++.+|+|.++|+
T Consensus 3 mL~v~~l~~~YG---~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYG---KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeeccc---ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 478899999996 368999999999999999999999999999999999999999999999995
Q ss_pred eEEEccCCccCC-CcHHHHhccCCCCCHH-HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccC
Q 039402 683 KAYVAQSPWIQS-GKIEDNILFGKEMNRE-RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQD 760 (1496)
Q Consensus 683 ~~yv~Q~~~i~~-~ti~eNI~~g~~~~~~-~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1496)
++||||.-.+|. .||+||+..|....+. +..+. .+++-.+.||. .....+.++.+|||||||-++|||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 499999999986 5999999988543221 11110 12333455553 22234788999999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHh-C-CcEEEEEccCcCcc-ccCCEEEEEeCCeEEEecChHHHHhc
Q 039402 761 SDIYLFDDPFSAVDAHTGSHLFQEVLLGLL-S-SKTVIYVTHQVEFL-PAADLILVMKDGKITQAGKYNDLINS 831 (1496)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~G~~~~l~~~ 831 (1496)
|++++||||+.+|-|...+.||+. +..+. + +.||++|-++..+. +.+||.++|++|+|+.+|+.+|+.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~-i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEA-IKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHH-HHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999965 44443 3 67999999999985 56999999999999999999999765
No 496
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=335.32 Aligned_cols=205 Identities=30% Similarity=0.465 Sum_probs=169.7
Q ss_pred ccEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcCe--------
Q 039402 616 TALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT-------- 682 (1496)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g~-------- 682 (1496)
..++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|.
T Consensus 24 ~~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 24 TALEVRNLNLFYG---DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred cEEEEEEEEEEEC---CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 4689999999995 3579999999999999999999999999999999999987 48999998762
Q ss_pred -------eEEEccCCccCCCcHHHHhccCCC---C-CH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHH
Q 039402 683 -------KAYVAQSPWIQSGKIEDNILFGKE---M-NR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 683 -------~~yv~Q~~~i~~~ti~eNI~~g~~---~-~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 747 (1496)
++|++|++.+++.|++||+.++.. . .+ ++..++++..++.+++. +..++++.+|||||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHHH
Confidence 589999999988899999987532 1 11 22333444444433222 23567889999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
||||+||||++++|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++.. ||++++|++|++++.|+++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEE-LITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999887764 55555557999999999999765 9999999999999999998
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 87643
No 497
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=333.04 Aligned_cols=204 Identities=27% Similarity=0.411 Sum_probs=166.9
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g~--------- 682 (1496)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYG---SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeC---CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 478999999995 35799999999999999999999999999999999999987 4999998762
Q ss_pred ------eEEEccCCccCCC-cHHHHhccCCCC-----CHH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChH
Q 039402 683 ------KAYVAQSPWIQSG-KIEDNILFGKEM-----NRE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGG 746 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~-ti~eNI~~g~~~-----~~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGG 746 (1496)
++|++|++.++.. |++||+.++... ..+ +..++++..++.+++. ....+...+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 5899999998865 999999875311 121 1223333333322111 2245678899999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecCh
Q 039402 747 QKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKY 825 (1496)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~ 825 (1496)
||||++||||++++|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 232 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEE-LLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPT 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999888875 45444557999999999999765 999999999999999999
Q ss_pred HHHHhc
Q 039402 826 NDLINS 831 (1496)
Q Consensus 826 ~~l~~~ 831 (1496)
+++.+.
T Consensus 233 ~~~~~~ 238 (253)
T PRK14267 233 RKVFEN 238 (253)
T ss_pred HHHHhC
Confidence 887643
No 498
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=331.55 Aligned_cols=203 Identities=26% Similarity=0.387 Sum_probs=168.1
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCC-----CccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~-----~~G~i~~~g~--------- 682 (1496)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYG---ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEEC---CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 478999999995 35799999999999999999999999999999999999986 5999999772
Q ss_pred -----eEEEccCCccCCCcHHHHhccCCCC---C-HH----HHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHH
Q 039402 683 -----KAYVAQSPWIQSGKIEDNILFGKEM---N-RE----RYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQ 749 (1496)
Q Consensus 683 -----~~yv~Q~~~i~~~ti~eNI~~g~~~---~-~~----~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkq 749 (1496)
++|++|++.++..|++||+.++... . ++ +..+.++..++.+++. +..++.+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 5899999999889999999876321 1 11 2223333334433221 2345677899999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChHHH
Q 039402 750 RIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYNDL 828 (1496)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~~l 828 (1496)
||+||||++.+|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEE-LMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999888765 55555567999999999999876 999999999999999998877
Q ss_pred Hh
Q 039402 829 IN 830 (1496)
Q Consensus 829 ~~ 830 (1496)
..
T Consensus 232 ~~ 233 (249)
T PRK14253 232 FS 233 (249)
T ss_pred Hc
Confidence 53
No 499
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-35 Score=332.70 Aligned_cols=204 Identities=27% Similarity=0.425 Sum_probs=167.2
Q ss_pred cEEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCC-----CCccEEEEcCe---------
Q 039402 617 ALDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT--------- 682 (1496)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~-----~~~G~i~~~g~--------- 682 (1496)
.-+++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|..+ |++|+|.++|.
T Consensus 5 ~~~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 81 (251)
T PRK14244 5 HASVKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNV 81 (251)
T ss_pred EEEeeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccch
Confidence 357889999995 3579999999999999999999999999999999999986 47999999772
Q ss_pred ------eEEEccCCccCCCcHHHHhccCCC-----CCHHH----HHHHHHHhchhhHHHhccCCCcccccCCCCCCChHH
Q 039402 683 ------KAYVAQSPWIQSGKIEDNILFGKE-----MNRER----YNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQ 747 (1496)
Q Consensus 683 ------~~yv~Q~~~i~~~ti~eNI~~g~~-----~~~~~----~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQ 747 (1496)
++|++|++.++..|++||+.++.. .+.+. ..++++..++.+++ .+..+..+.+|||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq 154 (251)
T PRK14244 82 VLLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQ 154 (251)
T ss_pred HHHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHH
Confidence 589999999988899999987621 11111 22333433332211 123456788999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCcCcccc-CCEEEEEeCCeEEEecChH
Q 039402 748 KQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFQEVLLGLLSSKTVIYVTHQVEFLPA-ADLILVMKDGKITQAGKYN 826 (1496)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~G~~~ 826 (1496)
|||++||||++.+|+++||||||++||+.+...+.+ .+..+.+++|+|++||+++++.. ||++++|++|++++.|+.+
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (251)
T PRK14244 155 QQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIEN-LIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQ 233 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999887764 55555568999999999999875 9999999999999999998
Q ss_pred HHHhc
Q 039402 827 DLINS 831 (1496)
Q Consensus 827 ~l~~~ 831 (1496)
++.+.
T Consensus 234 ~~~~~ 238 (251)
T PRK14244 234 EIFKN 238 (251)
T ss_pred HHhcC
Confidence 87643
No 500
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=331.81 Aligned_cols=193 Identities=32% Similarity=0.487 Sum_probs=160.7
Q ss_pred EEEEeeEEEecCCCCCCceeeeeEEEeCCcEEEEEecCCCcHHHHHHHHhcCCCCCccEEEEcCe--------eEEEccC
Q 039402 618 LDIVDGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVAQS 689 (1496)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~ilG~~~~~~G~i~~~g~--------~~yv~Q~ 689 (1496)
++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|.++|++|+|.++|. ++|++|+
T Consensus 2 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~ 78 (255)
T PRK11248 2 LQISHLYADYG---GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQN 78 (255)
T ss_pred EEEEEEEEEeC---CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCC
Confidence 67899999995 357999999999999999999999999999999999999999999999873 6899999
Q ss_pred CccCC-CcHHHHhccCCC---CCH----HHHHHHHHHhchhhHHHhccCCCcccccCCCCCCChHHHHHHHHHHHHccCC
Q 039402 690 PWIQS-GKIEDNILFGKE---MNR----ERYNAVLDACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDS 761 (1496)
Q Consensus 690 ~~i~~-~ti~eNI~~g~~---~~~----~~~~~v~~~~~l~~d~~~l~~g~~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 761 (1496)
+.++. .|++||+.++.. .+. ++..++++..++.+ .....+.+||||||||++||||++.+|
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGq~qrl~laral~~~p 147 (255)
T PRK11248 79 EGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEG-----------AEKRYIWQLSGGQRQRVGIARALAANP 147 (255)
T ss_pred CccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChh-----------HhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 98876 599999987531 222 22333444444422 234567899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHHH-h-CCcEEEEEccCcCcccc-CCEEEEEe--CCeEEEecCh
Q 039402 762 DIYLFDDPFSAVDAHTGSHLFQEVLLGL-L-SSKTVIYVTHQVEFLPA-ADLILVMK--DGKITQAGKY 825 (1496)
Q Consensus 762 ~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvilvtH~~~~l~~-~d~i~~l~--~G~i~~~G~~ 825 (1496)
+++||||||++||+.+...+.+. +..+ . .|+|+|++||+++.+.. ||+|++|+ +|++++.++.
T Consensus 148 ~lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 148 QLLLLDEPFGALDAFTREQMQTL-LLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999998888754 4443 3 48999999999999865 99999998 5999987764
Done!