BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039404
(65 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length
Murine Apaf-1
Length = 1256
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
+Q++ G+++ L+I AH V AFS + Y+ TC DK +K+WD+ G
Sbjct: 646 LQVFKAETGEKL---LDIKAHEDEVLCCAFSSDDS--YIATCSADKKVKIWDSATG 696
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 23 LEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGVK 65
L + H V FS ++ + +CG DKT++V+ A G K
Sbjct: 616 LVVRPHTDAVYHACFSQDGQR--IASCGADKTLQVFKAETGEK 656
Score = 25.4 bits (54), Expect = 7.6, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 1 VAYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+A S++ V+++ + +V + H+ V+ + FS P+ + +T DD+TI+VW+
Sbjct: 864 IALSQYCVELWNIDSRLKVA---DCRGHLSWVHGVMFS-PDGSSF-LTASDDQTIRVWE 917
>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1
Length = 1249
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
+Q++ G+++ L+I AH V AFS + Y+ TC DK +K+WD+ G
Sbjct: 639 LQVFKAETGEKL---LDIKAHEDEVLCCAFSSDDS--YIATCSADKKVKIWDSATG 689
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 23 LEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGVK 65
L + H V FS ++ + +CG DKT++V+ A G K
Sbjct: 609 LVVRPHTDAVYHACFSQDGQR--IASCGADKTLQVFKAETGEK 649
Score = 25.4 bits (54), Expect = 7.6, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 1 VAYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+A S++ V+++ + +V + H+ V+ + FS P+ + +T DD+TI+VW+
Sbjct: 857 IALSQYCVELWNIDSRLKVA---DCRGHLSWVHGVMFS-PDGSSF-LTASDDQTIRVWE 910
>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel
Site
pdb|2XL2|B Chain B, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel
Site
pdb|2XL3|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide And Histone H3
Peptide
pdb|2XL3|B Chain B, Wdr5 In Complex With An Rbbp5 Peptide And Histone H3
Peptide
Length = 334
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 83 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 119
>pdb|2GNQ|A Chain A, Structure Of Wdr5
Length = 336
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 85 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 121
>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1
Angstrom
pdb|2CO0|C Chain C, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
Length = 315
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 64 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 100
>pdb|2H9L|A Chain A, Wdr5delta23
pdb|2H9P|A Chain A, Wdr5 In Complex With Trimethylated H3k4 Peptide
Length = 329
Score = 35.0 bits (79), Expect = 0.010, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 78 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 114
>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f)
Length = 315
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 64 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 100
>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
Activity By A Histone H3 Based Peptide Mimetic
pdb|3PSL|B Chain B, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
Activity By A Histone H3 Based Peptide Mimetic
pdb|3UVK|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll2
pdb|3UVL|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll3
pdb|3UVM|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll4
pdb|3UVN|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1a
pdb|3UVN|C Chain C, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1a
pdb|3UVO|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1b
Length = 318
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 67 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 103
>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
Length = 315
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 64 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 100
>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX
pdb|2H14|A Chain A, Crystal Of Wdr5 (Apo-Form)
pdb|3P4F|A Chain A, Structural And Biochemical Insights Into Mll1 Core Complex
Assembly And Regulation
Length = 317
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 66 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 102
>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y)
Length = 315
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 64 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 100
>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a)
Length = 315
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 64 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 100
>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5
Module Of The Mll1 Complex
pdb|2H68|B Chain B, Histone H3 Recognition And Presentation By The Wdr5
Module Of The Mll1 Complex
pdb|2H6K|A Chain A, Histone H3 Recognition And Presentation By The Wdr5
Module Of The Mll1 Complex
pdb|2H6K|B Chain B, Histone H3 Recognition And Presentation By The Wdr5
Module Of The Mll1 Complex
pdb|2H6N|A Chain A, Histone H3 Recognition And Presentation By The Wdr5
Module Of The Mll1 Complex
pdb|2H6N|B Chain B, Histone H3 Recognition And Presentation By The Wdr5
Module Of The Mll1 Complex
pdb|2H6Q|A Chain A, Histone H3 Recognition And Presentation By The Wdr5
Module Of The Mll1 Complex
pdb|2H6Q|B Chain B, Histone H3 Recognition And Presentation By The Wdr5
Module Of The Mll1 Complex
pdb|3EG6|A Chain A, Structure Of Wdr5 Bound To Mll1 Peptide
pdb|4ERQ|A Chain A, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERQ|B Chain B, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERQ|C Chain C, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERY|A Chain A, X-Ray Structure Of Wdr5-Mll3 Win Motif Peptide Binary
Complex
pdb|4ERZ|A Chain A, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ERZ|B Chain B, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ERZ|C Chain C, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ES0|A Chain A, X-Ray Structure Of Wdr5-Setd1b Win Motif Peptide Binary
Complex
pdb|4ESG|A Chain A, X-Ray Structure Of Wdr5-Mll1 Win Motif Peptide Binary
Complex
pdb|4ESG|B Chain B, X-Ray Structure Of Wdr5-Mll1 Win Motif Peptide Binary
Complex
pdb|4EWR|A Chain A, X-Ray Structure Of Wdr5-Setd1a Win Motif Peptide Binary
Complex
Length = 312
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 61 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 97
>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide
pdb|2H9M|C Chain C, Wdr5 In Complex With Unmodified H3k4 Peptide
pdb|2H9N|A Chain A, Wdr5 In Complex With Monomethylated H3k4 Peptide
pdb|2H9N|C Chain C, Wdr5 In Complex With Monomethylated H3k4 Peptide
pdb|2O9K|A Chain A, Wdr5 In Complex With Dimethylated H3k4 Peptide
pdb|2O9K|C Chain C, Wdr5 In Complex With Dimethylated H3k4 Peptide
Length = 313
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 62 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 98
>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction
Length = 318
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 67 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 103
>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3SMR|B Chain B, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3SMR|C Chain C, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3SMR|D Chain D, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3UR4|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3UR4|B Chain B, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|4IA9|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 In Complex
With 2-
Chloro-4-Fluoro-3-Methyl-N-[2-(4-Methylpiperazin-1-Yl)-
5- Nitrophenyl]benzamide
Length = 312
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 61 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 97
>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of
Methylated Histone H3 Lysine 4 By The Wd-40 Protein
Wdr5
pdb|2G99|B Chain B, Structural Basis For The Specific Recognition Of
Methylated Histone H3 Lysine 4 By The Wd-40 Protein
Wdr5
Length = 308
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 57 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 93
>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of
Methylated Histone H3 Lysine 4 By The Wd-40 Protein
Wdr5
Length = 311
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 60 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 96
>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel
Histone Mark That Supports Euchromatin Maintenance
Length = 318
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
I H G++D+A+S + L ++ DDKT+K+WD ++G
Sbjct: 67 ISGHKLGISDVAWSSDSNLL--VSASDDKTLKIWDVSSG 103
>pdb|3IZA|A Chain A, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|B Chain B, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|C Chain C, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|D Chain D, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|E Chain E, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|F Chain F, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|G Chain G, Structure Of An Apoptosome-Procaspase-9 Card Complex
Length = 1263
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
+Q++ G+++ LEI AH V AFS ++ ++ TC DK +K+W++ G
Sbjct: 645 LQVFKAETGEKL---LEIKAHEDEVLCCAFSTDDR--FIATCSVDKKVKIWNSMTG 695
Score = 30.0 bits (66), Expect = 0.30, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 27 AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
H VN FS +K L +C D T+K+WDAT+
Sbjct: 747 GHTNSVNHCRFSPDDKLL--ASCSADGTLKLWDATSA 781
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 1 VAYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
VA S++ V+++ + +V + H+ V+ + FS P+ + +T DD+TI++W+
Sbjct: 863 VALSQYCVELWNTDSRSKVA---DCRGHLSWVHGVMFS-PDGSSF-LTSSDDQTIRLWE 916
Score = 26.2 bits (56), Expect = 5.1, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 23 LEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGVK 65
L + H V FS ++ + +CG DKT++V+ A G K
Sbjct: 615 LVVRPHTDAVYHACFSEDGQR--IASCGADKTLQVFKAETGEK 655
>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|D Chain D, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|G Chain G, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|H Chain H, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|K Chain K, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|L Chain L, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|O Chain O, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|P Chain P, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|S Chain S, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|T Chain T, Paf-Ah Holoenzyme: Lis1ALFA2
Length = 410
Score = 33.1 bits (74), Expect = 0.042, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
++++ GD R + H V DI+F H K L +C D TIK+WD
Sbjct: 132 IKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLL--ASCSADMTIKLWD 178
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 45 YVITCGDDKTIKVWDATN 62
++++C DDKT++VWD N
Sbjct: 352 FILSCADDKTLRVWDYKN 369
>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex
Of The Copi Vesicular Coat
pdb|3MKQ|C Chain C, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex
Of The Copi Vesicular Coat
pdb|3MKQ|E Chain E, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex
Of The Copi Vesicular Coat
Length = 814
Score = 32.3 bits (72), Expect = 0.074, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
++++ N G++V ++ +AH + IA HP K YV++ DD T+K+W+ N
Sbjct: 79 IRVFNYNTGEKV---VDFEAHPDYIRSIAV-HPTKP-YVLSGSDDLTVKLWNWEN 128
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 31 GVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
GVN + + + Y+IT DD TIK+WD
Sbjct: 186 GVNYVDYYPLPDKPYMITASDDLTIKIWD 214
>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6
pdb|2YNO|B Chain B, Yeast Betaprime Cop 1-304h6
Length = 310
Score = 31.6 bits (70), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
++++ N G++V ++ +AH + IA HP K YV++ DD T+K+W+ N
Sbjct: 79 IRVFNYNTGEKV---VDFEAHPDYIRSIAV-HPTKP-YVLSGSDDLTVKLWNWEN 128
Score = 29.6 bits (65), Expect = 0.48, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 31 GVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
GVN + + + Y+IT DD TIK+WD
Sbjct: 186 GVNYVDYYPLPDKPYMITASDDLTIKIWD 214
>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif
Length = 304
Score = 31.6 bits (70), Expect = 0.10, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
++++ N G++V ++ +AH + IA HP K YV++ DD T+K+W+ N
Sbjct: 79 IRVFNYNTGEKV---VDFEAHPDYIRSIAV-HPTKP-YVLSGSDDLTVKLWNWEN 128
Score = 29.6 bits (65), Expect = 0.48, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 31 GVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
GVN + + + Y+IT DD TIK+WD
Sbjct: 186 GVNYVDYYPLPDKPYMITASDDLTIKIWD 214
>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif
Length = 604
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
++++ N G++V ++ +AH + IA HP K YV++ DD T+K+W+ N
Sbjct: 79 IRVFNYNTGEKV---VDFEAHPDYIRSIAV-HPTKP-YVLSGSDDLTVKLWNWEN 128
Score = 29.6 bits (65), Expect = 0.50, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 31 GVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
GVN + + + Y+IT DD TIK+WD
Sbjct: 186 GVNYVDYYPLPDKPYMITASDDLTIKIWD 214
>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex
Length = 408
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 27 AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
AH G VN + F+ + L+++T G D +++W+++NG
Sbjct: 243 AHNGKVNGLCFT--SDGLHLLTVGTDNRMRLWNSSNG 277
>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure
pdb|2YMU|B Chain B, Structure Of A Highly Repetitive Propeller Structure
Length = 577
Score = 31.2 bits (69), Expect = 0.16, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 19 VRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
V++ ++AH V +AFS P+ Q + + DDKT+K+W+
Sbjct: 6 VKERNRLEAHSSSVRGVAFS-PDGQT-IASASDDKTVKLWN 44
Score = 28.5 bits (62), Expect = 0.96, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 21 QHLE-IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
QHL+ + H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 335 QHLQTLTGHSSSVWGVAFS-PDGQT-IASASDDKTVKLWN 372
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H VN +AF P+ Q + + DDKT+K+W+
Sbjct: 258 LTGHSSSVNGVAF-RPDGQT-IASASDDKTVKLWN 290
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 94 LTGHSSSVRGVAFS-PDGQT-IASASDDKTVKLWN 126
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 217 LTGHSSSVRGVAFS-PDGQT-IASASDDKTVKLWN 249
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 381 LTGHSSSVRGVAFS-PDGQT-IASASDDKTVKLWN 413
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 463 LTGHSSSVRGVAFS-PDGQT-IASASDDKTVKLWN 495
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 504 LTGHSSSVRGVAFS-PDGQT-IASASDDKTVKLWN 536
Score = 25.8 bits (55), Expect = 5.7, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 422 LTGHSSSVWGVAFS-PDDQT-IASASDDKTVKLWN 454
Score = 25.8 bits (55), Expect = 7.2, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 53 LTGHSSSVWGVAFS-PDGQT-IASASDDKTVKLWN 85
Score = 25.8 bits (55), Expect = 7.2, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 135 LTGHSSSVWGVAFS-PDGQT-IASASDDKTVKLWN 167
Score = 25.8 bits (55), Expect = 7.2, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 176 LTGHSSSVWGVAFS-PDGQT-IASASDDKTVKLWN 208
Score = 25.8 bits (55), Expect = 7.2, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+ H V +AFS P+ Q + + DDKT+K+W+
Sbjct: 299 LTGHSSSVWGVAFS-PDGQT-IASASDDKTVKLWN 331
>pdb|3DXK|C Chain C, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND
INHIBITOR Ck0944636
pdb|3DXM|C Chain C, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND
INHIBITOR Ck0993548
pdb|3RSE|C Chain C, Structural And Biochemical Characterization Of Two
Binding Sites For Nucleation Promoting Factor Wasp-Vca
On Arp23 COMPLEX
pdb|3UKR|C Chain C, Crystal Structure Of Bos Taurus Arp2/3 Complex With
Bound Inhibitor Ck-666
pdb|3UKU|C Chain C, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|C Chain C, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 372
Score = 31.2 bits (69), Expect = 0.17, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVW 58
+ H V IY +G V+ H E+ H G V I ++ + + ++TCG D+ VW
Sbjct: 28 NNHEVHIYEKSGNKWVQVH-ELKEHNGQVTGIDWAPDSNR--IVTCGTDRNAYVW 79
>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH
Histone H4
pdb|3CFV|A Chain A, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH
Histone H4
Length = 414
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
+DAH VN ++F+ P + + T DKT+ +WD N
Sbjct: 271 VDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRN 307
>pdb|1K8K|C Chain C, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|C Chain C, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|C Chain C, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|C Chain C, Crystal Structure Of Bovine Arp23 COMPLEX
CO-Crystallized With Adp And Crosslinked With
Gluteraldehyde
pdb|2P9K|C Chain C, Crystal Structure Of Bovine Arp23 COMPLEX
CO-Crystallized With Atp And Crosslinked With
Glutaraldehyde
pdb|2P9L|C Chain C, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|C Chain C, Crystal Structure Of Bovine Arp23 COMPLEX
CO-Crystallized With Adp
pdb|2P9P|C Chain C, Crystal Structure Of Bovine Arp23 COMPLEX
CO-Crystallized With Adp
pdb|2P9S|C Chain C, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|C Chain C, Crystal Structure Of Bovine Arp23 COMPLEX
CO-Crystallized With Amp-Pnp And Calcium
Length = 372
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVW 58
+ H V IY +G V+ H E+ H G V + ++ + + ++TCG D+ VW
Sbjct: 28 NNHEVHIYEKSGNKWVQVH-ELKEHNGQVTGVDWAPDSNR--IVTCGTDRNAYVW 79
>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4
pdb|2XU7|A Chain A, Structural Basis For Rbap48 Binding To Fog-1
pdb|2XU7|B Chain B, Structural Basis For Rbap48 Binding To Fog-1
Length = 425
Score = 30.4 bits (67), Expect = 0.29, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
+DAH VN ++F+ P + + T DKT+ +WD N
Sbjct: 269 VDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRN 305
>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide
Length = 430
Score = 30.0 bits (66), Expect = 0.30, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
+DAH VN ++F+ P + + T DKT+ +WD N
Sbjct: 273 VDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRN 309
>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55
pdb|3C9C|A Chain A, Structural Basis Of Histone H4 Recognition By P55
Length = 432
Score = 30.0 bits (66), Expect = 0.30, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
+DAH VN ++F+ P + + T DKT+ +WD N
Sbjct: 275 VDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRN 311
>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3
pdb|2YBA|B Chain B, Crystal Structure Of Nurf55 In Complex With Histone H3
pdb|2YB8|B Chain B, Crystal Structure Of Nurf55 In Complex With Su(Z)12
Length = 422
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
+DAH VN ++F+ P + + T DKT+ +WD N
Sbjct: 277 VDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRN 313
>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH
Histone H4
Length = 414
Score = 30.0 bits (66), Expect = 0.32, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
+DAH VN ++F+ P + + T DKT+ +WD N
Sbjct: 271 VDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRN 307
>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A
Resolution Of 2.45 Angstrom
pdb|4AOW|B Chain B, Crystal Structure Of The Human Rack1 Protein At A
Resolution Of 2.45 Angstrom
pdb|4AOW|C Chain C, Crystal Structure Of The Human Rack1 Protein At A
Resolution Of 2.45 Angstrom
Length = 340
Score = 29.3 bits (64), Expect = 0.55, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 26 DAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
++H V+ + FS + +++CG DK +KVW+ N
Sbjct: 168 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 204
>pdb|4I79|A Chain A, Crystal Structure Of Human Nup43
pdb|4I79|B Chain B, Crystal Structure Of Human Nup43
Length = 399
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 39 HPNKQLYVITCGDDKTIKVWDATNG 63
HPN+Q V T G D + +WD G
Sbjct: 245 HPNQQHVVATGGQDGMLSIWDVRQG 269
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64
+ AH + ++ F HP+ ++ TC +D ++ WDA+ V
Sbjct: 276 LKAHEAEMWEVHF-HPSNPEHLFTCSEDGSLWHWDASTDV 314
>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
Length = 317
Score = 29.3 bits (64), Expect = 0.60, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 26 DAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
++H V+ + FS + +++CG DK +KVW+ N
Sbjct: 145 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
pdb|2XZN|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
Length = 343
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 27 AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
AH VN ++ S PN + Y+ T G DK + +WD N
Sbjct: 211 AHESNVNHLSIS-PNGK-YIATGGKDKKLLIWDILN 244
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 22 HLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
H + H V+D+A S N + I+ DKT+++WD G
Sbjct: 69 HKALTGHNHFVSDLALSQEN--CFAISSSWDKTLRLWDLRTG 108
>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1
Length = 402
Score = 28.5 bits (62), Expect = 0.88, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 23 LEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
+ ++ H V +A+ HP Q +++ G D I VWD G
Sbjct: 125 ITLEGHTKRVGIVAW-HPTAQNVLLSAGXDNVILVWDVGTG 164
>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
pdb|3ODT|B Chain B, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
Length = 313
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 7/18 (38%), Positives = 15/18 (83%)
Query: 46 VITCGDDKTIKVWDATNG 63
+++CG+D+T+++W NG
Sbjct: 239 IVSCGEDRTVRIWSKENG 256
>pdb|3MMY|A Chain A, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export Factor
Rae1
pdb|3MMY|C Chain C, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export Factor
Rae1
pdb|3MMY|E Chain E, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export Factor
Rae1
pdb|3MMY|G Chain G, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export Factor
Rae1
Length = 368
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 28 HVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
H G V D+ +S +++ +C DKT K+WD ++
Sbjct: 85 HTGPVLDVCWSDDGSKVFTASC--DKTAKMWDLSS 117
>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN
ALLOSTERIC Inhibitor Scf-I2
pdb|3MKS|D Chain D, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN
ALLOSTERIC Inhibitor Scf-I2
pdb|3V7D|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Psic1 Peptide Complex
pdb|3V7D|D Chain D, Crystal Structure Of Scskp1-Sccdc4-Psic1 Peptide Complex
Length = 464
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 23 LEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
L++ H GGV + ++H +++ D+T++VWD G
Sbjct: 156 LQLSGHDGGVWALKYAHGG---ILVSGSTDRTVRVWDIKKG 193
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 45 YVITCGDDKTIKVWDATN 62
YVIT DDK I+V+D+ N
Sbjct: 134 YVITGADDKMIRVYDSIN 151
>pdb|2OAJ|A Chain A, Crystal Structure Of Sro7 From S. Cerevisiae
Length = 902
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 39 HPNKQLYVITCGDDKTIKVWDATNG 63
HPN L++IT +D ++ WDA +G
Sbjct: 220 HPN-SLHIITIHEDNSLVFWDANSG 243
>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana
Length = 694
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 27 AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
H V +AFS N+Q +++ D+TIK+W+
Sbjct: 470 GHTKDVLSVAFSLDNRQ--IVSASRDRTIKLWN 500
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 26 DAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62
+ H V+ + FS Q +++ DKT+KVW+ +N
Sbjct: 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN 550
>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form
Length = 402
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 23 LEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
+ ++ H V +A+ HP Q +++ G D I VWD G
Sbjct: 125 ITLEGHTKRVGIVAW-HPTAQNVLLSAGCDNVILVWDVGTG 164
>pdb|1PI6|A Chain A, Yeast Actin Interacting Protein 1 (Aip1), Orthorhombic
Crystal Form
Length = 615
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 32 VNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
V D+ FS P+ +VIT G D+ I +D +G
Sbjct: 209 VRDVEFS-PDSGEFVITVGSDRKISCFDGKSG 239
>pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane
pdb|3BG0|D Chain D, Architecture Of A Coat For The Nuclear Pore Membrane
pdb|3BG0|E Chain E, Architecture Of A Coat For The Nuclear Pore Membrane
pdb|3BG0|H Chain H, Architecture Of A Coat For The Nuclear Pore Membrane
pdb|3BG1|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane
pdb|3BG1|D Chain D, Architecture Of A Coat For The Nuclear Pore Membrane
pdb|3BG1|E Chain E, Architecture Of A Coat For The Nuclear Pore Membrane
pdb|3BG1|H Chain H, Architecture Of A Coat For The Nuclear Pore Membrane
Length = 316
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
S V+I+ G ++ ++ H G V +A++HP + +C D+ + +W NG
Sbjct: 33 SDRSVKIFDVRNGGQILI-ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG 91
Query: 64 V 64
Sbjct: 92 T 92
>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex
pdb|1NEX|D Chain D, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex
Length = 464
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 23 LEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
L++ H GGV + ++H +++ D+T++VWD G
Sbjct: 156 LQLSGHDGGVWALKYAHGG---ILVSGSTDRTVRVWDIKKG 193
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 45 YVITCGDDKTIKVWDATN 62
YVIT DDK I+V+D+ N
Sbjct: 134 YVITGADDKXIRVYDSIN 151
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
+ H + + H K+ I+ D TI++WD NG
Sbjct: 306 LSGHTDRIYSTIYDHERKR--CISASXDTTIRIWDLENG 342
>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex
pdb|2OVQ|B Chain B, Structure Of The Skp1-Fbw7-Cyclinedegc Complex
pdb|2OVR|B Chain B, Structure Of The Skp1-Fbw7-Cyclinedegn Complex
Length = 445
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 45 YVITCGDDKTIKVWDATNG 63
+VIT DD T+K+WD G
Sbjct: 374 FVITSSDDGTVKLWDLKTG 392
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 27 AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
H GGV +S + +I+ D+T+KVW+A G
Sbjct: 157 GHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETG 189
>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor
Eif3i Complex With Eif3b C-Terminus (655-700)
pdb|3ZWL|D Chain D, Structure Of Eukaryotic Translation Initiation Factor
Eif3i Complex With Eif3b C-Terminus (655-700)
Length = 369
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
+D H G + I K Y +T D +IK+WD +NG
Sbjct: 70 LDGHTGTIWSIDVDCFTK--YCVTGSADYSIKLWDVSNG 106
>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From
Pyrococcus Horikoshii Ot3
pdb|2HUN|B Chain B, Crystal Structure Of Hypothetical Protein Ph0414 From
Pyrococcus Horikoshii Ot3
Length = 336
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 16 GDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKT 54
G VR L ++ HV + + ++++Y I+ G++KT
Sbjct: 211 GKNVRDWLYVEDHVRAIELVLLKGESREIYNISAGEEKT 249
>pdb|1PGU|A Chain A, Yeast Actin Interacting Protein 1 (aip1), Se-met Protein,
Monoclinic Crystal Form
pdb|1PGU|B Chain B, Yeast Actin Interacting Protein 1 (aip1), Se-met Protein,
Monoclinic Crystal Form
Length = 615
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 32 VNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
V D+ FS P+ +VIT G D+ I +D +G
Sbjct: 209 VRDVEFS-PDSGEFVITVGSDRKISCFDGKSG 239
>pdb|4G56|B Chain B, Crystal Structure Of Full Length Prmt5/mep50 Complexes
From Xenopus Laevis
pdb|4G56|D Chain D, Crystal Structure Of Full Length Prmt5/mep50 Complexes
From Xenopus Laevis
Length = 357
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 26 DAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
+AH VN +A + P K ++CG+D I +WD
Sbjct: 178 NAHSSEVNCVA-ACPGKDTIFLSCGEDGRILLWD 210
>pdb|1KNL|A Chain A, Streptomyces Lividans Xylan Binding Domain Cbm13
pdb|1MC9|A Chain A, Strepromyces Lividans Xylan Binding Domain Cbm13 In
Complex With Xylopentaose
Length = 130
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGV 32
VQIY C GGD + L D V GV
Sbjct: 71 VQIYSCWGGDNQKWRLNSDGSVVGV 95
>pdb|1KNM|A Chain A, Streptomyces Lividans Xylan Binding Domain Cbm13 In
Complex With Lactose
Length = 130
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGV 32
VQIY C GGD + L D V GV
Sbjct: 71 VQIYSCWGGDNQKWRLNSDGSVVGV 95
>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1
Length = 330
Score = 26.6 bits (57), Expect = 4.1, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
I+ H V +A+S N Y+ TC DK++ +W+
Sbjct: 103 IEGHENEVKGVAWS--NDGYYLATCSRDKSVWIWE 135
>pdb|1XYF|A Chain A, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis
pdb|1XYF|B Chain B, Endo-1,4-Beta-Xylanase From Streptomyces Olivaceoviridis
pdb|1ISV|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylose
pdb|1ISV|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylose
pdb|1ISW|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylobiose
pdb|1ISW|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylobiose
pdb|1ISX|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylotriose
pdb|1ISX|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Xylotriose
pdb|1ISY|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Glucose
pdb|1ISY|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Glucose
pdb|1ISZ|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Galactose
pdb|1ISZ|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Galactose
pdb|1IT0|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Lactose
pdb|1IT0|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With Lactose
pdb|1V6U|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With 2(2)-Alpha-L-
Arabinofuranosyl-Xylobiose
pdb|1V6U|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With 2(2)-Alpha-L-
Arabinofuranosyl-Xylobiose
pdb|1V6V|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With 3(2)-Alpha-L-
Arabinofuranosyl-Xylotriose
pdb|1V6V|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With 3(2)-Alpha-L-
Arabinofuranosyl-Xylotriose
pdb|1V6W|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With
2(2)-4-O-Methyl-Alpha- D-Glucuronosyl-Xylobiose
pdb|1V6W|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With
2(2)-4-O-Methyl-Alpha- D-Glucuronosyl-Xylobiose
pdb|1V6X|A Chain A, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With
3(3)-4-O-Methyl-Alpha- D-Glucuronosyl-Xylotriose
pdb|1V6X|B Chain B, Crystal Structure Of Xylanase From Streptomyces
Olivaceoviridis E-86 Complexed With
3(3)-4-O-Methyl-Alpha- D-Glucuronosyl-Xylotriose
Length = 436
Score = 26.2 bits (56), Expect = 5.5, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGV 32
VQIY C GGD + L D + GV
Sbjct: 377 VQIYSCWGGDNQKWRLNSDGSIVGV 401
>pdb|2D1Z|A Chain A, Crystal Structure Of Catalytic-Site Mutant Xylanase From
Streptomyces Olivaceoviridis E-86
pdb|2D1Z|B Chain B, Crystal Structure Of Catalytic-Site Mutant Xylanase From
Streptomyces Olivaceoviridis E-86
pdb|2D20|A Chain A, Crystal Structure Of Michaelis Complex Of Catalytic-Site
Mutant Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D20|B Chain B, Crystal Structure Of Michaelis Complex Of Catalytic-Site
Mutant Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D22|A Chain A, Crystal Structure Of Covalent Glycosyl-Enzyme Intermediate
Of Catalytic-Site Mutant Xylanase From Streptomyces
Olivaceoviridis E-86
pdb|2D22|B Chain B, Crystal Structure Of Covalent Glycosyl-Enzyme Intermediate
Of Catalytic-Site Mutant Xylanase From Streptomyces
Olivaceoviridis E-86
pdb|2D23|A Chain A, Crystal Structure Of Ep Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D23|B Chain B, Crystal Structure Of Ep Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D24|A Chain A, Crystal Structure Of Es Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D24|B Chain B, Crystal Structure Of Es Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
Length = 436
Score = 25.8 bits (55), Expect = 5.7, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 8 VQIYPCNGGDEVRQHLEIDAHVGGV 32
VQIY C GGD + L D + GV
Sbjct: 377 VQIYSCWGGDNQKWRLNSDGSIVGV 401
>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2
Length = 425
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 27 AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
H G ++ + F+ NK L ++ DD T+++W NG
Sbjct: 245 GHHGPISVLEFNDTNKLL--LSASDDGTLRIWHGGNG 279
>pdb|4GQB|B Chain B, Crystal Structure Of The Human Prmt5:mep50 Complex
Length = 344
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 27 AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59
AH V +A S P+K ++C +D I +WD
Sbjct: 167 AHAAQVTCVAAS-PHKDSVFLSCSEDNRILLWD 198
>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1
Length = 345
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVW 58
++ H V +AF ++L +C DD+T+++W
Sbjct: 190 LEGHESTVWSLAFDPSGQRL--ASCSDDRTVRIW 221
>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex:
Destruction Motif Binding And Lysine Specificity On The
Scfbeta-Trcp1 Ubiquitin Ligase
Length = 435
Score = 25.8 bits (55), Expect = 7.1, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 27 AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61
H VN + F Y+++ D+TIKVW+ +
Sbjct: 254 GHRAAVNVVDFDDK----YIVSASGDRTIKVWNTS 284
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
pdb|1JNE|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
Length = 420
Score = 25.4 bits (54), Expect = 7.4, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 22 HLEIDAHVGGVNDIAFSHPNKQL 44
HL++ VGG +DI HPNK +
Sbjct: 76 HLKVLLSVGGDHDIDPDHPNKYI 98
>pdb|2PM7|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE
Copii Vesicular Coat, Selenomethionine Version
pdb|2PM7|D Chain D, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE
Copii Vesicular Coat, Selenomethionine Version
Length = 297
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
+ H G V + ++HP + +C D + +W NG
Sbjct: 49 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVXIWKEENG 87
>pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice
Length = 753
Score = 25.4 bits (54), Expect = 8.7, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 25 IDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63
+ H G V + ++HP + +C D + +W NG
Sbjct: 49 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 87
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,206,211
Number of Sequences: 62578
Number of extensions: 73152
Number of successful extensions: 331
Number of sequences better than 100.0: 70
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 176
Number of HSP's gapped (non-prelim): 177
length of query: 65
length of database: 14,973,337
effective HSP length: 36
effective length of query: 29
effective length of database: 12,720,529
effective search space: 368895341
effective search space used: 368895341
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)