Query 039404
Match_columns 65
No_of_seqs 120 out of 2116
Neff 11.7
Searched_HMMs 29240
Date Mon Mar 25 15:52:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039404.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039404hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ggc_A P55CDC, cell division c 99.7 6.7E-16 2.3E-20 76.1 8.0 59 2-65 260-318 (318)
2 4h5i_A Guanine nucleotide-exch 99.6 1.8E-15 6.3E-20 76.8 7.9 57 2-62 287-343 (365)
3 4gga_A P55CDC, cell division c 99.6 9.9E-15 3.4E-19 74.9 8.0 57 2-63 340-396 (420)
4 4gqb_B Methylosome protein 50; 99.6 2E-14 6.8E-19 72.7 8.3 61 2-64 99-160 (344)
5 2ynn_A Coatomer subunit beta'; 99.6 3E-14 1E-18 70.7 8.4 58 2-64 204-261 (304)
6 4gqb_B Methylosome protein 50; 99.6 4.5E-14 1.5E-18 71.5 8.3 59 2-64 145-203 (344)
7 2ynn_A Coatomer subunit beta'; 99.6 4.3E-14 1.5E-18 70.1 7.7 57 2-63 73-129 (304)
8 4ggc_A P55CDC, cell division c 99.6 6.7E-14 2.3E-18 69.0 8.2 59 3-64 42-100 (318)
9 2w18_A PALB2, fancn, partner a 99.5 2.6E-14 8.9E-19 73.0 6.5 54 2-60 301-355 (356)
10 3ow8_A WD repeat-containing pr 99.5 1.5E-13 5.2E-18 68.8 8.0 58 2-64 224-281 (321)
11 4gga_A P55CDC, cell division c 99.5 1.9E-13 6.4E-18 70.2 8.2 59 3-64 122-180 (420)
12 1got_B GT-beta; complex (GTP-b 99.5 2E-13 6.8E-18 68.6 7.9 57 2-63 202-258 (340)
13 3frx_A Guanine nucleotide-bind 99.5 2.3E-13 7.9E-18 68.0 7.8 58 2-64 172-229 (319)
14 4aow_A Guanine nucleotide-bind 99.5 1.3E-13 4.5E-18 68.4 6.9 62 2-65 273-340 (340)
15 3frx_A Guanine nucleotide-bind 99.5 3.6E-13 1.2E-17 67.2 8.4 56 2-62 83-138 (319)
16 1vyh_C Platelet-activating fac 99.5 2.1E-13 7.1E-18 70.1 7.7 58 2-64 314-371 (410)
17 4g56_B MGC81050 protein; prote 99.5 1.6E-13 5.3E-18 69.6 7.1 55 2-62 288-343 (357)
18 3iz6_a 40S ribosomal protein R 99.5 1.2E-13 4.2E-18 70.3 6.8 59 2-64 224-282 (380)
19 2pbi_B Guanine nucleotide-bind 99.5 2.7E-13 9.3E-18 68.6 7.9 57 2-63 216-272 (354)
20 1vyh_C Platelet-activating fac 99.5 1.2E-13 4.2E-18 70.9 6.5 58 2-64 126-183 (410)
21 3ow8_A WD repeat-containing pr 99.5 2.5E-13 8.6E-18 68.0 7.5 58 2-64 182-239 (321)
22 2xzm_R RACK1; ribosome, transl 99.5 4.3E-13 1.5E-17 67.4 8.4 55 2-61 94-148 (343)
23 2xzm_R RACK1; ribosome, transl 99.5 3.6E-13 1.2E-17 67.7 8.1 61 2-64 45-109 (343)
24 4e54_B DNA damage-binding prot 99.5 1.1E-13 3.9E-18 71.3 6.4 60 1-63 137-197 (435)
25 1got_B GT-beta; complex (GTP-b 99.5 4.1E-13 1.4E-17 67.5 8.1 58 2-64 160-217 (340)
26 3vu4_A KMHSV2; beta-propeller 99.5 5.5E-13 1.9E-17 67.5 8.5 57 2-63 213-272 (355)
27 1erj_A Transcriptional repress 99.5 3.6E-13 1.2E-17 68.8 7.8 58 2-64 141-198 (393)
28 3vu4_A KMHSV2; beta-propeller 99.5 7.1E-13 2.4E-17 67.1 8.1 61 2-64 155-229 (355)
29 4gq1_A NUP37; propeller, trans 99.5 2.3E-13 8E-18 69.6 6.3 59 2-64 162-220 (393)
30 3bg1_A Protein SEC13 homolog; 99.5 4.3E-13 1.5E-17 66.9 7.1 60 1-62 184-247 (316)
31 2pm7_B Protein transport prote 99.5 5.3E-13 1.8E-17 66.1 7.1 59 2-63 27-87 (297)
32 3fm0_A Protein CIAO1; WDR39,SG 99.5 9.5E-13 3.3E-17 66.3 7.9 59 2-63 79-137 (345)
33 3fm0_A Protein CIAO1; WDR39,SG 99.4 5.4E-13 1.9E-17 67.2 6.9 60 2-63 34-93 (345)
34 1nr0_A Actin interacting prote 99.4 7.8E-13 2.7E-17 70.7 7.8 58 2-64 166-223 (611)
35 3iz6_a 40S ribosomal protein R 99.4 9.2E-13 3.2E-17 67.1 7.8 61 2-64 316-377 (380)
36 3bg1_A Protein SEC13 homolog; 99.4 5.7E-13 1.9E-17 66.5 6.8 59 2-63 31-91 (316)
37 4ery_A WD repeat-containing pr 99.4 1.9E-12 6.5E-17 64.1 8.6 58 2-64 83-140 (312)
38 2hes_X YDR267CP; beta-propelle 99.4 7.4E-13 2.5E-17 66.4 7.1 60 2-63 125-185 (330)
39 4g56_B MGC81050 protein; prote 99.4 3.7E-13 1.3E-17 68.2 6.0 59 2-64 245-303 (357)
40 4aow_A Guanine nucleotide-bind 99.4 1.1E-12 3.9E-17 65.1 7.4 58 2-64 191-248 (340)
41 2pm7_B Protein transport prote 99.4 9E-13 3.1E-17 65.3 7.1 59 2-62 176-238 (297)
42 3vl1_A 26S proteasome regulato 99.4 1.2E-12 4E-17 66.7 7.6 58 2-64 157-214 (420)
43 3dm0_A Maltose-binding peripla 99.4 1.2E-12 4E-17 70.7 7.4 58 2-64 537-594 (694)
44 4ery_A WD repeat-containing pr 99.4 2.7E-12 9.3E-17 63.6 8.2 58 2-64 41-98 (312)
45 4gq1_A NUP37; propeller, trans 99.4 7.3E-14 2.5E-18 71.4 2.4 60 2-63 107-176 (393)
46 3zwl_B Eukaryotic translation 99.4 3.3E-12 1.1E-16 63.8 8.3 58 2-64 50-107 (369)
47 2pbi_B Guanine nucleotide-bind 99.4 4.6E-12 1.6E-16 64.1 8.7 58 2-64 172-231 (354)
48 3k26_A Polycomb protein EED; W 99.4 2.9E-12 1E-16 64.0 8.0 58 2-64 91-149 (366)
49 2hes_X YDR267CP; beta-propelle 99.4 2.4E-12 8.1E-17 64.6 7.4 58 2-61 76-137 (330)
50 1nr0_A Actin interacting prote 99.4 2.5E-12 8.5E-17 68.8 7.7 58 2-64 208-272 (611)
51 3f3f_A Nucleoporin SEH1; struc 99.4 1.7E-12 5.8E-17 64.1 6.6 42 21-64 298-339 (351)
52 4e54_B DNA damage-binding prot 99.4 3.1E-13 1.1E-17 69.7 4.0 61 2-64 269-329 (435)
53 3vl1_A 26S proteasome regulato 99.4 2.4E-12 8.4E-17 65.5 7.1 58 2-64 115-172 (420)
54 3lrv_A PRE-mRNA-splicing facto 99.4 3.2E-12 1.1E-16 64.2 7.4 58 2-64 188-246 (343)
55 3gre_A Serine/threonine-protei 99.4 5.5E-12 1.9E-16 64.7 8.3 58 2-64 188-247 (437)
56 2ymu_A WD-40 repeat protein; u 99.4 3.9E-12 1.4E-16 66.9 8.0 54 2-61 34-87 (577)
57 3mmy_A MRNA export factor; mRN 99.4 6.1E-12 2.1E-16 62.8 7.9 59 2-64 60-119 (368)
58 4a11_B DNA excision repair pro 99.4 5.1E-12 1.8E-16 63.8 7.5 58 2-64 310-367 (408)
59 3dm0_A Maltose-binding peripla 99.4 4.1E-12 1.4E-16 68.6 7.5 56 2-62 448-503 (694)
60 3f3f_A Nucleoporin SEH1; struc 99.4 8.8E-12 3E-16 61.6 8.0 60 2-63 29-91 (351)
61 2aq5_A Coronin-1A; WD40 repeat 99.4 5E-12 1.7E-16 64.5 7.0 58 2-64 150-209 (402)
62 3lrv_A PRE-mRNA-splicing facto 99.4 8.2E-12 2.8E-16 62.7 7.6 58 2-64 145-203 (343)
63 2aq5_A Coronin-1A; WD40 repeat 99.4 7E-12 2.4E-16 64.0 7.4 62 2-64 100-165 (402)
64 3k26_A Polycomb protein EED; W 99.4 3.6E-12 1.2E-16 63.6 6.2 60 2-63 134-193 (366)
65 3i2n_A WD repeat-containing pr 99.3 4.2E-12 1.4E-16 63.3 6.1 61 2-64 278-355 (357)
66 3v7d_B Cell division control p 99.3 1.1E-11 3.8E-16 64.0 7.6 58 2-64 286-343 (464)
67 2pm9_A Protein WEB1, protein t 99.3 9.6E-12 3.3E-16 63.2 7.3 58 2-64 281-339 (416)
68 1erj_A Transcriptional repress 99.3 1.4E-11 4.8E-16 63.0 7.8 60 2-63 225-288 (393)
69 3sfz_A APAF-1, apoptotic pepti 99.3 1.3E-11 4.6E-16 69.5 8.2 58 2-64 633-690 (1249)
70 2ymu_A WD-40 repeat protein; u 99.3 6E-12 2E-16 66.3 6.3 52 2-59 526-577 (577)
71 1sq9_A Antiviral protein SKI8; 99.3 1.3E-11 4.4E-16 62.5 7.2 58 2-64 309-397 (397)
72 4aez_A CDC20, WD repeat-contai 99.3 2.2E-11 7.4E-16 62.2 7.8 60 2-64 323-382 (401)
73 3dwl_C Actin-related protein 2 99.3 2.1E-12 7.1E-17 65.1 3.8 61 1-64 28-88 (377)
74 2j04_B YDR362CP, TAU91; beta p 99.3 4.1E-12 1.4E-16 67.5 5.1 59 1-63 282-343 (524)
75 3jrp_A Fusion protein of prote 99.3 2.1E-11 7.2E-16 61.1 7.0 60 2-63 178-241 (379)
76 3v7d_B Cell division control p 99.3 2.1E-11 7.1E-16 63.0 7.1 57 2-64 138-194 (464)
77 3mmy_A MRNA export factor; mRN 99.3 3.3E-11 1.1E-15 60.1 7.4 57 2-64 104-162 (368)
78 4aez_A CDC20, WD repeat-contai 99.3 5.8E-11 2E-15 60.7 8.2 59 2-64 192-250 (401)
79 2xyi_A Probable histone-bindin 99.3 4E-11 1.4E-15 61.9 7.6 61 2-63 250-310 (430)
80 1gxr_A ESG1, transducin-like e 99.3 5.2E-11 1.8E-15 58.9 7.8 58 2-64 159-216 (337)
81 2j04_B YDR362CP, TAU91; beta p 99.3 8.5E-12 2.9E-16 66.3 5.2 56 2-62 373-428 (524)
82 1sq9_A Antiviral protein SKI8; 99.3 4.5E-11 1.5E-15 60.5 7.6 58 2-64 251-324 (397)
83 3ei3_B DNA damage-binding prot 99.3 2.5E-11 8.5E-16 61.5 6.6 60 2-64 223-284 (383)
84 4h5i_A Guanine nucleotide-exch 99.3 4.9E-11 1.7E-15 60.7 7.6 56 7-64 246-302 (365)
85 2oit_A Nucleoporin 214KDA; NH2 99.3 4.8E-12 1.6E-16 65.8 4.0 60 2-63 114-182 (434)
86 3dwl_C Actin-related protein 2 99.3 1.5E-11 5.1E-16 62.0 5.6 58 2-61 118-176 (377)
87 2oit_A Nucleoporin 214KDA; NH2 99.3 2.2E-11 7.6E-16 63.4 6.3 55 2-61 168-222 (434)
88 3odt_A Protein DOA1; ubiquitin 99.3 8.2E-11 2.8E-15 57.8 8.1 57 2-64 201-257 (313)
89 1k8k_C P40, ARP2/3 complex 41 99.3 2.4E-11 8.3E-16 60.9 6.2 59 2-63 26-84 (372)
90 3zwl_B Eukaryotic translation 99.3 1.1E-10 3.7E-15 58.3 8.5 59 2-64 193-251 (369)
91 3mkq_A Coatomer beta'-subunit; 99.3 4.2E-11 1.4E-15 65.1 7.4 58 2-64 31-88 (814)
92 2vdu_B TRNA (guanine-N(7)-)-me 99.3 4.7E-11 1.6E-15 61.8 7.2 58 2-64 216-273 (450)
93 3odt_A Protein DOA1; ubiquitin 99.2 8.9E-11 3E-15 57.7 7.7 57 2-63 35-91 (313)
94 3jrp_A Fusion protein of prote 99.2 7.7E-11 2.6E-15 59.1 7.6 59 2-63 75-135 (379)
95 1pgu_A Actin interacting prote 99.2 5.6E-11 1.9E-15 62.7 7.4 57 2-63 506-573 (615)
96 3dw8_B Serine/threonine-protei 99.2 6.2E-11 2.1E-15 60.8 7.1 59 4-64 196-260 (447)
97 2oaj_A Protein SNI1; WD40 repe 99.2 1E-10 3.5E-15 65.2 8.1 57 2-64 170-244 (902)
98 1p22_A F-BOX/WD-repeat protein 99.2 1.1E-10 3.7E-15 60.2 7.7 56 2-64 149-204 (435)
99 3ei3_B DNA damage-binding prot 99.2 1.5E-10 5E-15 58.7 7.9 55 2-62 326-382 (383)
100 3mkq_A Coatomer beta'-subunit; 99.2 1.1E-10 3.9E-15 63.4 7.6 57 2-63 73-129 (814)
101 1gxr_A ESG1, transducin-like e 99.2 1.5E-10 5E-15 57.3 7.5 58 5-64 71-130 (337)
102 1yfq_A Cell cycle arrest prote 99.2 1.2E-10 3.9E-15 58.0 7.0 61 2-64 212-284 (342)
103 4a11_B DNA excision repair pro 99.2 1.6E-10 5.4E-15 58.4 7.6 58 2-63 162-219 (408)
104 3jro_A Fusion protein of prote 99.2 7E-11 2.4E-15 64.6 6.6 59 2-63 27-87 (753)
105 1pgu_A Actin interacting prote 99.2 2.1E-10 7.1E-15 60.6 8.2 58 2-64 179-240 (615)
106 3sfz_A APAF-1, apoptotic pepti 99.2 1E-10 3.4E-15 66.1 7.0 57 2-63 719-775 (1249)
107 1r5m_A SIR4-interacting protei 99.2 1.2E-10 4.2E-15 59.0 6.1 57 2-63 306-362 (425)
108 1k8k_C P40, ARP2/3 complex 41 99.2 2.3E-10 8E-15 57.3 7.1 61 2-64 160-235 (372)
109 2ovr_B FBW7, F-BOX/WD repeat p 99.2 2.5E-10 8.7E-15 58.9 7.3 55 2-63 135-189 (445)
110 3i2n_A WD repeat-containing pr 99.2 9.9E-11 3.4E-15 58.4 5.6 59 2-64 86-150 (357)
111 3jro_A Fusion protein of prote 99.2 2.9E-10 1E-14 62.3 7.6 59 2-63 73-133 (753)
112 2xyi_A Probable histone-bindin 99.2 4.3E-10 1.5E-14 58.1 7.9 61 2-63 200-264 (430)
113 1r5m_A SIR4-interacting protei 99.2 4.7E-10 1.6E-14 56.9 7.8 57 2-64 126-182 (425)
114 2pm9_A Protein WEB1, protein t 99.2 8.8E-11 3E-15 59.7 5.2 61 2-64 85-147 (416)
115 2oaj_A Protein SNI1; WD40 repe 99.2 4.1E-10 1.4E-14 62.9 8.1 56 2-63 75-130 (902)
116 2w18_A PALB2, fancn, partner a 99.1 1.7E-10 5.8E-15 59.2 5.7 58 2-64 199-271 (356)
117 3dw8_B Serine/threonine-protei 99.1 5E-10 1.7E-14 57.4 7.4 58 2-62 245-315 (447)
118 3gre_A Serine/threonine-protei 99.1 9.1E-11 3.1E-15 60.2 4.6 58 2-64 232-294 (437)
119 2j04_A TAU60, YPL007P, hypothe 99.1 2.8E-10 9.7E-15 61.5 6.5 54 2-63 103-161 (588)
120 1p22_A F-BOX/WD-repeat protein 99.1 7.4E-10 2.5E-14 57.1 7.4 59 2-64 229-287 (435)
121 1yfq_A Cell cycle arrest prote 99.1 5.3E-10 1.8E-14 55.6 6.7 61 2-63 29-90 (342)
122 2vdu_B TRNA (guanine-N(7)-)-me 99.1 1.8E-10 6.3E-15 59.6 5.0 61 2-64 167-231 (450)
123 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1.7E-09 5.7E-14 55.9 7.2 60 2-63 378-443 (445)
124 2j04_A TAU60, YPL007P, hypothe 99.0 2.5E-09 8.4E-14 57.9 6.1 60 1-64 146-213 (588)
125 1l0q_A Surface layer protein; 98.9 1.3E-08 4.5E-13 51.6 7.7 57 2-64 8-65 (391)
126 3bws_A Protein LP49; two-domai 98.9 3.4E-08 1.2E-12 50.6 8.3 58 2-64 187-245 (433)
127 2ojh_A Uncharacterized protein 98.8 8.2E-08 2.8E-12 46.6 7.9 55 3-64 19-74 (297)
128 1l0q_A Surface layer protein; 98.8 1.1E-07 3.9E-12 48.2 8.2 56 3-64 51-107 (391)
129 3bws_A Protein LP49; two-domai 98.8 2E-08 6.8E-13 51.5 5.1 61 2-64 140-202 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 98.7 3.1E-07 1.1E-11 47.6 7.9 53 6-64 159-214 (415)
131 1nir_A Nitrite reductase; hemo 98.6 1E-06 3.4E-11 47.3 8.3 56 2-63 155-212 (543)
132 2hqs_A Protein TOLB; TOLB, PAL 98.5 2.4E-06 8.1E-11 44.4 8.4 53 6-64 203-258 (415)
133 3u4y_A Uncharacterized protein 98.4 7.9E-06 2.7E-10 40.6 8.5 56 3-64 17-73 (331)
134 1k32_A Tricorn protease; prote 98.4 1.9E-06 6.4E-11 49.0 6.5 57 2-63 396-462 (1045)
135 3o4h_A Acylamino-acid-releasin 98.4 3E-06 1E-10 45.3 6.9 53 6-64 175-229 (582)
136 1xfd_A DIP, dipeptidyl aminope 98.4 2.3E-06 7.8E-11 46.6 6.3 57 3-64 34-102 (723)
137 1pby_B Quinohemoprotein amine 98.4 7E-06 2.4E-10 40.6 7.7 54 5-64 259-312 (337)
138 1ri6_A Putative isomerase YBHE 98.3 8.8E-06 3E-10 40.4 7.4 56 3-61 12-68 (343)
139 1nir_A Nitrite reductase; hemo 98.3 4.2E-06 1.4E-10 45.0 6.5 59 4-64 391-460 (543)
140 1z68_A Fibroblast activation p 98.3 1.3E-06 4.6E-11 47.6 4.5 56 4-64 34-101 (719)
141 1pby_B Quinohemoprotein amine 98.3 1.1E-05 3.7E-10 40.0 7.4 59 2-64 7-67 (337)
142 3hfq_A Uncharacterized protein 98.3 7.8E-06 2.7E-10 41.0 7.0 59 4-64 260-321 (347)
143 1jmx_B Amine dehydrogenase; ox 98.3 8.3E-06 2.8E-10 40.6 6.7 54 5-64 274-327 (349)
144 2oiz_A Aromatic amine dehydrog 98.2 2.4E-05 8.2E-10 40.1 7.6 50 6-63 286-335 (361)
145 1jmx_B Amine dehydrogenase; ox 98.1 4.1E-05 1.4E-09 38.1 7.5 59 2-64 17-76 (349)
146 3vgz_A Uncharacterized protein 98.1 3.1E-05 1.1E-09 38.7 6.7 55 5-64 163-217 (353)
147 1ri6_A Putative isomerase YBHE 98.1 5.2E-05 1.8E-09 37.6 7.2 54 4-60 251-306 (343)
148 2z3z_A Dipeptidyl aminopeptida 98.0 1.5E-05 5.2E-10 43.4 5.4 52 4-62 99-150 (706)
149 3hfq_A Uncharacterized protein 98.0 2.7E-05 9.4E-10 39.1 5.9 54 5-61 62-116 (347)
150 3vgz_A Uncharacterized protein 98.0 0.00017 5.9E-09 36.0 8.4 60 3-64 203-264 (353)
151 1k32_A Tricorn protease; prote 98.0 9.4E-05 3.2E-09 42.3 8.0 53 6-64 358-411 (1045)
152 2ecf_A Dipeptidyl peptidase IV 98.0 5.8E-05 2E-09 41.3 6.7 29 32-63 111-139 (741)
153 3u4y_A Uncharacterized protein 98.0 8.1E-05 2.8E-09 37.0 6.7 56 5-64 61-119 (331)
154 2ecf_A Dipeptidyl peptidase IV 97.9 8.1E-05 2.8E-09 40.8 7.1 51 6-63 129-182 (741)
155 2ojh_A Uncharacterized protein 97.9 2.8E-05 9.7E-10 37.6 4.9 55 5-64 194-260 (297)
156 1xfd_A DIP, dipeptidyl aminope 97.9 1.8E-05 6E-10 43.2 4.0 56 5-64 90-145 (723)
157 2z3z_A Dipeptidyl aminopeptida 97.8 0.00013 4.6E-09 39.8 6.8 56 5-63 234-294 (706)
158 4a5s_A Dipeptidyl peptidase 4 97.8 7.4E-05 2.5E-09 41.3 5.7 52 6-64 92-143 (740)
159 3scy_A Hypothetical bacterial 97.8 0.00042 1.4E-08 35.0 8.0 55 5-63 281-340 (361)
160 1xip_A Nucleoporin NUP159; bet 97.8 8.4E-05 2.9E-09 38.9 5.3 50 2-62 142-191 (388)
161 2oiz_A Aromatic amine dehydrog 97.8 0.00021 7.1E-09 36.6 6.5 54 4-64 29-92 (361)
162 3pe7_A Oligogalacturonate lyas 97.7 0.0002 6.8E-09 36.3 5.9 53 7-64 61-113 (388)
163 3e5z_A Putative gluconolactona 97.7 0.00082 2.8E-08 33.2 8.2 55 3-64 47-101 (296)
164 1z68_A Fibroblast activation p 97.7 0.00019 6.6E-09 39.3 5.6 53 5-64 89-141 (719)
165 3scy_A Hypothetical bacterial 97.6 0.0005 1.7E-08 34.7 6.5 55 4-61 231-290 (361)
166 1jof_A Carboxy-CIS,CIS-muconat 97.6 0.0015 5.1E-08 33.3 8.8 58 4-63 117-178 (365)
167 3no2_A Uncharacterized protein 97.5 0.0013 4.4E-08 32.7 7.0 52 2-60 11-63 (276)
168 3fvz_A Peptidyl-glycine alpha- 97.5 0.0013 4.4E-08 33.1 7.1 56 5-62 267-322 (329)
169 4a5s_A Dipeptidyl peptidase 4 97.4 0.00023 7.8E-09 39.5 4.2 55 5-64 35-103 (740)
170 3azo_A Aminopeptidase; POP fam 97.4 0.0034 1.2E-07 34.2 8.5 56 6-63 217-275 (662)
171 1qks_A Cytochrome CD1 nitrite 97.4 0.0039 1.3E-07 34.2 8.8 52 4-61 175-226 (567)
172 3o4h_A Acylamino-acid-releasin 97.4 0.00015 5.2E-09 38.9 3.2 51 4-60 214-274 (582)
173 2dg1_A DRP35, lactonase; beta 97.4 0.0029 9.9E-08 31.6 8.2 55 4-63 64-122 (333)
174 2hz6_A Endoplasmic reticulum t 97.3 0.00031 1.1E-08 36.2 3.8 56 2-64 15-70 (369)
175 1xip_A Nucleoporin NUP159; bet 97.3 0.0055 1.9E-07 32.3 7.9 53 4-63 104-156 (388)
176 2xdw_A Prolyl endopeptidase; a 97.2 0.0027 9.1E-08 35.2 6.6 51 7-63 152-218 (710)
177 1jof_A Carboxy-CIS,CIS-muconat 97.2 0.0054 1.8E-07 31.3 8.5 54 5-61 166-223 (365)
178 2bkl_A Prolyl endopeptidase; m 97.2 0.0025 8.6E-08 35.2 6.2 56 4-64 145-213 (695)
179 1q7f_A NHL, brain tumor CG1071 97.1 0.0061 2.1E-07 29.8 7.1 50 7-63 230-281 (286)
180 3c5m_A Oligogalacturonate lyas 97.1 0.0031 1.1E-07 32.0 5.6 52 7-64 61-113 (396)
181 2gop_A Trilobed protease; beta 97.0 0.0087 3E-07 30.0 6.7 37 7-50 86-122 (347)
182 3dsm_A Uncharacterized protein 96.9 0.013 4.4E-07 29.7 7.1 55 4-64 62-116 (328)
183 3pe7_A Oligogalacturonate lyas 96.7 0.018 6.1E-07 29.2 6.9 52 6-63 168-226 (388)
184 2bkl_A Prolyl endopeptidase; m 96.6 0.0037 1.3E-07 34.6 4.0 35 28-64 119-158 (695)
185 1yiq_A Quinohemoprotein alcoho 96.6 0.0098 3.4E-07 33.3 5.6 54 5-64 454-507 (689)
186 2hz6_A Endoplasmic reticulum t 96.6 0.00096 3.3E-08 34.4 1.5 54 2-64 98-151 (369)
187 2gop_A Trilobed protease; beta 96.5 0.021 7.1E-07 28.6 6.2 49 5-63 42-95 (347)
188 3azo_A Aminopeptidase; POP fam 96.5 0.01 3.4E-07 32.4 5.2 33 28-62 128-170 (662)
189 3fvz_A Peptidyl-glycine alpha- 96.4 0.029 9.8E-07 28.3 7.8 52 6-62 69-121 (329)
190 2dg1_A DRP35, lactonase; beta 96.4 0.023 7.7E-07 28.4 5.8 39 24-64 39-77 (333)
191 1rwi_B Serine/threonine-protei 96.3 0.029 9.8E-07 27.1 6.4 54 5-63 212-265 (270)
192 2mad_H Methylamine dehydrogena 96.3 0.04 1.4E-06 28.6 7.8 54 6-64 298-352 (373)
193 1mda_H Methylamine dehydrogena 96.2 0.026 8.9E-07 29.5 5.7 51 7-64 47-107 (368)
194 1mda_H Methylamine dehydrogena 96.1 0.056 1.9E-06 28.3 6.5 53 7-64 295-348 (368)
195 3sjl_D Methylamine dehydrogena 95.9 0.047 1.6E-06 28.9 5.8 53 5-64 58-120 (386)
196 1qks_A Cytochrome CD1 nitrite 95.9 0.087 3E-06 29.1 7.3 57 2-64 214-277 (567)
197 1kb0_A Quinohemoprotein alcoho 95.7 0.056 1.9E-06 30.3 5.7 53 6-64 457-509 (677)
198 2mad_H Methylamine dehydrogena 95.7 0.089 3E-06 27.4 7.3 50 7-63 48-107 (373)
199 3no2_A Uncharacterized protein 95.5 0.085 2.9E-06 26.2 7.0 54 4-64 144-197 (276)
200 1q7f_A NHL, brain tumor CG1071 95.5 0.08 2.7E-06 25.9 7.8 52 4-61 183-237 (286)
201 3c75_H MADH, methylamine dehyd 95.5 0.082 2.8E-06 28.3 5.7 52 6-64 99-160 (426)
202 3c5m_A Oligogalacturonate lyas 95.4 0.11 3.6E-06 26.4 6.3 53 5-63 167-226 (396)
203 1yr2_A Prolyl oligopeptidase; 95.4 0.079 2.7E-06 29.7 5.6 51 6-63 189-253 (741)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 95.1 0.13 4.3E-06 25.4 7.6 54 5-62 246-299 (314)
205 3c75_H MADH, methylamine dehyd 94.8 0.21 7.1E-06 26.8 7.1 54 6-64 350-404 (426)
206 4gq2_M Nucleoporin NUP120; bet 94.7 0.097 3.3E-06 30.7 4.9 32 31-64 237-268 (950)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 94.6 0.17 5.9E-06 24.9 7.7 32 30-63 226-257 (314)
208 1yr2_A Prolyl oligopeptidase; 94.6 0.3 1E-05 27.5 6.5 56 6-63 243-304 (741)
209 3iuj_A Prolyl endopeptidase; h 94.6 0.047 1.6E-06 30.5 3.3 35 28-64 127-166 (693)
210 1kv9_A Type II quinohemoprotei 94.5 0.19 6.4E-06 28.3 5.6 54 5-64 437-490 (668)
211 3sjl_D Methylamine dehydrogena 94.1 0.32 1.1E-05 25.9 7.5 54 6-64 311-365 (386)
212 2xdw_A Prolyl endopeptidase; a 93.9 0.42 1.4E-05 26.8 7.7 53 8-64 361-416 (710)
213 3e5z_A Putative gluconolactona 93.8 0.27 9.4E-06 24.2 7.9 34 26-61 168-201 (296)
214 3iuj_A Prolyl endopeptidase; h 93.7 0.29 1E-05 27.4 5.4 51 6-63 155-218 (693)
215 1rwi_B Serine/threonine-protei 93.6 0.28 9.4E-06 23.6 7.9 54 5-63 170-223 (270)
216 3dsm_A Uncharacterized protein 93.3 0.4 1.4E-05 24.3 8.6 52 6-64 203-255 (328)
217 3g4e_A Regucalcin; six bladed 93.1 0.39 1.3E-05 23.8 8.3 58 5-64 170-231 (297)
218 4fhn_B Nucleoporin NUP120; pro 93.0 0.12 4.3E-06 30.7 3.4 30 33-64 241-270 (1139)
219 1flg_A Protein (quinoprotein e 92.4 0.45 1.5E-05 26.4 4.8 54 5-64 465-518 (582)
220 2ad6_A Methanol dehydrogenase 92.2 0.52 1.8E-05 26.1 4.9 54 5-64 443-496 (571)
221 3dr2_A Exported gluconolactona 91.8 0.63 2.2E-05 23.1 7.8 50 5-61 66-115 (305)
222 3hrp_A Uncharacterized protein 91.0 0.99 3.4E-05 23.8 6.4 33 29-63 218-250 (409)
223 3f7f_A Nucleoporin NUP120; nuc 90.9 0.73 2.5E-05 26.7 4.7 29 32-64 224-252 (729)
224 2ghs_A AGR_C_1268P; regucalcin 90.7 0.93 3.2E-05 22.9 7.0 51 5-64 70-120 (326)
225 3pbp_A Nucleoporin NUP82; beta 90.6 0.89 3E-05 24.9 4.7 34 29-62 124-158 (452)
226 3g4e_A Regucalcin; six bladed 90.6 0.89 3E-05 22.6 8.0 50 5-63 34-83 (297)
227 3dr2_A Exported gluconolactona 90.5 0.92 3.1E-05 22.6 6.3 30 30-61 188-223 (305)
228 1w6s_A Methanol dehydrogenase 88.9 1.5 5.1E-05 24.7 4.9 54 5-64 452-505 (599)
229 2qe8_A Uncharacterized protein 88.8 1.4 4.8E-05 22.4 7.5 57 5-63 92-155 (343)
230 2z2n_A Virginiamycin B lyase; 86.7 1.7 5.9E-05 21.0 7.5 51 5-60 77-127 (299)
231 2z2n_A Virginiamycin B lyase; 86.1 1.9 6.4E-05 20.9 7.6 51 5-60 119-169 (299)
232 3nol_A Glutamine cyclotransfer 85.9 2.3 7.7E-05 21.6 5.1 52 4-63 105-156 (262)
233 2iwa_A Glutamine cyclotransfer 85.9 2.2 7.6E-05 21.5 5.0 53 4-63 84-136 (266)
234 1k3i_A Galactose oxidase precu 85.7 3.3 0.00011 23.3 6.0 54 7-63 220-275 (656)
235 1yiq_A Quinohemoprotein alcoho 84.6 3.2 0.00011 23.7 4.7 44 2-49 492-536 (689)
236 2ece_A 462AA long hypothetical 84.0 3.8 0.00013 22.6 6.3 53 6-63 164-238 (462)
237 3q7m_A Lipoprotein YFGL, BAMB; 82.2 3.6 0.00012 21.0 7.1 20 45-64 105-124 (376)
238 3hrp_A Uncharacterized protein 82.2 4 0.00014 21.6 8.2 31 31-63 324-355 (409)
239 3mbr_X Glutamine cyclotransfer 81.1 3.8 0.00013 20.5 5.6 52 4-63 83-134 (243)
240 3nok_A Glutaminyl cyclase; bet 81.1 4 0.00014 20.8 5.6 53 4-64 114-166 (268)
241 3hxj_A Pyrrolo-quinoline quino 80.9 3.7 0.00013 20.3 5.7 52 3-61 114-165 (330)
242 2qc5_A Streptogramin B lactona 80.8 3.5 0.00012 20.0 7.7 52 5-61 40-91 (300)
243 3q7m_A Lipoprotein YFGL, BAMB; 80.4 4.3 0.00015 20.7 6.5 55 3-64 110-164 (376)
244 2ece_A 462AA long hypothetical 78.8 6.4 0.00022 21.8 6.8 51 5-60 227-287 (462)
245 2ghs_A AGR_C_1268P; regucalcin 76.1 5.9 0.0002 20.0 7.5 31 30-61 179-209 (326)
246 1fwx_A Nitrous oxide reductase 74.9 9.6 0.00033 21.9 5.5 52 7-62 255-308 (595)
247 3sre_A PON1, serum paraoxonase 74.1 6.9 0.00023 20.7 3.7 30 31-61 222-251 (355)
248 2fp8_A Strictosidine synthase; 67.3 10 0.00035 19.0 7.0 29 32-62 187-216 (322)
249 2xe4_A Oligopeptidase B; hydro 65.8 17 0.00058 21.0 5.2 31 31-63 175-211 (751)
250 1kb0_A Quinohemoprotein alcoho 64.3 18 0.00061 20.7 6.4 20 45-64 329-348 (677)
251 3qqz_A Putative uncharacterize 56.0 18 0.00062 18.2 5.1 37 24-61 21-57 (255)
252 2xzh_A Clathrin heavy chain 1; 44.7 37 0.0013 18.4 7.4 51 5-60 280-330 (365)
253 4a2l_A BT_4663, two-component 41.5 51 0.0017 19.1 7.1 32 30-63 406-437 (795)
254 1ukf_A Avirulence protein AVRP 39.2 36 0.0012 16.7 3.1 32 32-64 121-152 (188)
255 1npe_A Nidogen, entactin; glyc 39.0 35 0.0012 16.5 8.6 32 30-62 79-110 (267)
256 3mwp_A Nucleoprotein; structur 37.6 9 0.00031 21.5 0.4 16 48-63 162-177 (577)
257 1ijq_A LDL receptor, low-densi 32.4 53 0.0018 16.6 7.7 53 5-62 9-61 (316)
258 3v9f_A Two-component system se 30.0 85 0.0029 18.2 5.1 30 30-62 407-436 (781)
259 2p4o_A Hypothetical protein; p 29.5 58 0.002 16.2 5.0 29 31-61 33-61 (306)
260 1vc3_B L-aspartate-alpha-decar 27.6 46 0.0016 14.4 4.4 16 6-21 18-33 (96)
261 1bpo_A Protein (clathrin); cla 26.3 98 0.0033 17.7 8.3 51 5-60 279-329 (494)
262 3tc9_A Hypothetical hydrolase; 25.3 87 0.003 16.8 7.5 30 31-61 271-300 (430)
263 3v65_B Low-density lipoprotein 25.0 84 0.0029 16.5 7.8 32 30-62 116-147 (386)
264 3oug_A Aspartate 1-decarboxyla 24.8 58 0.002 14.6 4.8 16 6-21 45-60 (114)
265 1pqh_A Aspartate 1-decarboxyla 24.5 65 0.0022 15.0 4.2 16 6-21 59-74 (143)
266 2c45_A Aspartate 1-decarboxyla 23.0 69 0.0024 14.9 4.3 16 6-21 42-57 (139)
267 3sbq_A Nitrous-oxide reductase 22.3 1.3E+02 0.0046 17.9 4.4 29 32-61 325-353 (638)
268 2be1_A Serine/threonine-protei 22.1 1E+02 0.0034 16.4 3.0 19 45-63 12-30 (339)
269 2p9w_A MAL S 1 allergenic prot 21.7 1E+02 0.0036 16.4 6.7 28 32-61 187-214 (334)
270 1uhe_A Aspartate 1-decarboxyla 21.3 66 0.0023 14.0 4.4 28 6-34 17-44 (97)
271 3das_A Putative oxidoreductase 21.2 1.1E+02 0.0036 16.3 6.6 32 30-63 32-63 (347)
272 3u12_A USP37 protein; structur 20.1 43 0.0015 15.6 0.9 12 52-63 23-34 (141)
No 1
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.67 E-value=6.7e-16 Score=76.08 Aligned_cols=59 Identities=17% Similarity=0.317 Sum_probs=51.2
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGVK 65 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~~ 65 (65)
++.|+.|++||+.++.... .+.+|.+.|.+++|+|++. +|++++.|++|++||+.+..|
T Consensus 260 g~~d~~i~iwd~~~~~~~~---~l~gH~~~V~~l~~spdg~--~l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 260 GFAQNQLVIWKYPTMAKVA---ELKGHTSRVLSLTMSPDGA--TVASAAADETLRLWRCFELDP 318 (318)
T ss_dssp CTTTCCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSS--CEEEEETTTEEEEECCSCCCC
T ss_pred EcCCCEEEEEECCCCcEEE---EEcCCCCCEEEEEEcCCCC--EEEEEecCCeEEEEECCCCCC
Confidence 3468999999998765443 6889999999999999999 899999999999999987654
No 2
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.64 E-value=1.8e-15 Score=76.80 Aligned_cols=57 Identities=14% Similarity=0.176 Sum_probs=48.7
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
|+.|+.|++||+.++.... ..+.+|...|.+++|+|++. +|++++.|++|++|++..
T Consensus 287 gs~D~~V~iwd~~~~~~~~--~~~~gH~~~V~~v~fSpdg~--~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 287 ASNDNSIALVKLKDLSMSK--IFKQAHSFAITEVTISPDST--YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EETTSCEEEEETTTTEEEE--EETTSSSSCEEEEEECTTSC--EEEEEETTSEEEEEECCT
T ss_pred EcCCCEEEEEECCCCcEEE--EecCcccCCEEEEEECCCCC--EEEEEeCCCeEEEEEcCC
Confidence 6789999999998865333 12468999999999999999 999999999999999854
No 3
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.60 E-value=9.9e-15 Score=74.88 Aligned_cols=57 Identities=18% Similarity=0.345 Sum_probs=49.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++||+.++... ..+.+|.+.|.+++|+|++. +|++++.|++|++||+.+.
T Consensus 340 g~~d~~I~iwd~~~~~~v---~~l~gH~~~V~~l~~spdg~--~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKV---AELKGHTSRVLSLTMSPDGA--TVASAAADETLRLWRCFEL 396 (420)
T ss_dssp CTTTCCEEEEETTTCCEE---EEECCCSSCEEEEEECTTSS--CEEEEETTTEEEEECCSCS
T ss_pred ecCCCEEEEEECCCCcEE---EEEcCCCCCEEEEEEcCCCC--EEEEEecCCeEEEEECCCC
Confidence 346899999999876543 36889999999999999999 8999999999999998653
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.59 E-value=2e-14 Score=72.75 Aligned_cols=61 Identities=18% Similarity=0.270 Sum_probs=51.0
Q ss_pred ccccCeEEEEECCCCceEe-eeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVR-QHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++.... ......+|.+.|.+++|+|++. ++++++.|++|++||+++++
T Consensus 99 ~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~--~l~sgs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 99 ASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT--QAVSGSKDICIKVWDLAQQV 160 (344)
T ss_dssp EETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTE
T ss_pred EECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC--EEEEEeCCCeEEEEECCCCc
Confidence 6789999999998765332 2234568999999999999999 99999999999999998764
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.58 E-value=3e-14 Score=70.70 Aligned_cols=58 Identities=19% Similarity=0.355 Sum_probs=50.7
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++... ..+.+|...|.+++|+|++. .+++++.|+.|++||..+++
T Consensus 204 ~s~D~~i~iWd~~~~~~~---~~~~~h~~~v~~~~~~p~~~--~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 204 ASDDLTIKIWDYQTKSCV---ATLEGHMSNVSFAVFHPTLP--IIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp EETTSEEEEEETTTTEEE---EEEECCSSCEEEEEECSSSS--EEEEEETTSCEEEEETTTCC
T ss_pred EcCCCeEEEEeCCCCccc---eeeCCCCCCEEEEEECCCCC--EEEEEcCCCeEEEEECCCCc
Confidence 567999999999876533 36889999999999999999 99999999999999998764
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.56 E-value=4.5e-14 Score=71.46 Aligned_cols=59 Identities=17% Similarity=0.300 Sum_probs=51.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++.... .+.+|...|.+++|++++.. ++++++.|+.|++||+++++
T Consensus 145 gs~d~~i~iwd~~~~~~~~---~~~~h~~~V~~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLS---SYRAHAAQVTCVAASPHKDS-VFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp EETTSCEEEEETTTTEEEE---EECCCSSCEEEEEECSSCTT-EEEEEETTSCEEEEETTSSS
T ss_pred EeCCCeEEEEECCCCcEEE---EEcCcCCceEEEEecCCCCC-ceeeeccccccccccccccc
Confidence 6789999999998865433 68899999999999998865 78999999999999998765
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.55 E-value=4.3e-14 Score=70.15 Aligned_cols=57 Identities=26% Similarity=0.524 Sum_probs=50.2
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++||+.++.... .+.+|...|.+++|+|++. ++++++.|++|++||++++
T Consensus 73 ~s~d~~i~vwd~~~~~~~~---~~~~h~~~v~~~~~~~~~~--~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 73 GSDDFRIRVFNYNTGEKVV---DFEAHPDYIRSIAVHPTKP--YVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp EETTSEEEEEETTTCCEEE---EEECCSSCEEEEEECSSSS--EEEEEETTSCEEEEEGGGT
T ss_pred ECCCCEEEEEECCCCcEEE---EEeCCCCcEEEEEEcCCCC--EEEEECCCCeEEEEECCCC
Confidence 6779999999998765443 6789999999999999999 9999999999999998764
No 8
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.55 E-value=6.7e-14 Score=68.95 Aligned_cols=59 Identities=14% Similarity=0.339 Sum_probs=49.2
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
+.|++|++||+.++.... ...+.+|...|.+++|+|++. ++++++.|+.|++|++++++
T Consensus 42 g~D~tV~iWd~~tg~~~~-~~~~~~~~~~V~~v~~~~~~~--~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 42 ALDNSVYLWSASSGDILQ-LLQMEQPGEYISSVAWIKEGN--YLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp EETTEEEEEETTTCCEEE-EEECCSTTCCEEEEEECTTSS--EEEEEETTSEEEEEETTTTE
T ss_pred EeCCEEEEEECCCCCEEE-EEEecCCCCeEEEEEECCCCC--EEEEEECCCcEEEeecCCce
Confidence 458999999998875433 224557888899999999999 99999999999999998764
No 9
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.55 E-value=2.6e-14 Score=73.04 Aligned_cols=54 Identities=11% Similarity=0.063 Sum_probs=44.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEe-EEEecCCCCcEEEEEecCCCcEEEEEC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVN-DIAFSHPNKQLYVITCGDDKTIKVWDA 60 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~s~~~~~~i~~w~~ 60 (65)
++.|++|++||+.++.... .+.+|...+. .++|+|+++ +|++++.|++|++||+
T Consensus 301 gS~DgTIkIWDl~tGk~l~---tL~gH~~~vvs~vafSPDG~--~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 301 ILTSGTIAIWDLLLGQCTA---LLPPVSDQHWSFVKWSGTDS--HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EETTSCEEEEETTTCSEEE---EECCC--CCCCEEEECSSSS--EEEEECTTSCEEEEEE
T ss_pred EcCCCcEEEEECCCCcEEE---EecCCCCCeEEEEEECCCCC--EEEEEECCCcEEEecC
Confidence 4569999999999876554 5778876655 589999999 9999999999999986
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.52 E-value=1.5e-13 Score=68.81 Aligned_cols=58 Identities=22% Similarity=0.410 Sum_probs=50.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+...... ..+.+|...|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus 224 ~s~dg~i~iwd~~~~~~~---~~~~~h~~~v~~~~~sp~~~--~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANLA---GTLSGHASWVLNVAFCPDDT--HFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp ECTTSCEEEEETTTCCEE---EEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTE
T ss_pred EcCCCeEEEEECCCccee---EEEcCCCCceEEEEECCCCC--EEEEEeCCCcEEEEeCCCCE
Confidence 567899999999876533 36788999999999999999 99999999999999998763
No 11
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.51 E-value=1.9e-13 Score=70.19 Aligned_cols=59 Identities=14% Similarity=0.339 Sum_probs=49.1
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
+.|+.|++||..++.... ...+.+|...|.+++|+|++. ++++|+.|+.|++||+.+++
T Consensus 122 gld~tV~lWd~~tg~~~~-~~~~~~~~~~V~sv~fspdg~--~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 122 ALDNSVYLWSASSGDILQ-LLQMEQPGEYISSVAWIKEGN--YLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp EETTEEEEEETTTCCEEE-EEECCSTTCCEEEEEECTTSS--EEEEEETTSCEEEEETTTTE
T ss_pred EeCCEEEEEECCCCCEEE-EEEecCCCCcEEEEEECCCCC--EEEEEECCCeEEEEEcCCCc
Confidence 458999999998875332 234557888899999999999 99999999999999998764
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.51 E-value=2e-13 Score=68.61 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=49.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++||+.++.... .+.+|...|.+++|+|++. .+++++.|+.|++||++++
T Consensus 202 g~~d~~v~~wd~~~~~~~~---~~~~h~~~v~~v~~~p~~~--~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQ---TFTGHESDINAICFFPNGN--AFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp EETTSCEEEEETTTCSEEE---EECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTT
T ss_pred EeCCCcEEEEECCCCeeEE---EEcCCcCCEEEEEEcCCCC--EEEEEcCCCcEEEEECCCC
Confidence 5679999999998765333 6788999999999999999 9999999999999999865
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.50 E-value=2.3e-13 Score=67.96 Aligned_cols=58 Identities=17% Similarity=0.269 Sum_probs=49.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.+.... ..+.+|...|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus 172 ~~~d~~i~~wd~~~~~~~---~~~~~h~~~v~~~~~sp~g~--~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 172 AGNDKMVKAWNLNQFQIE---ADFIGHNSNINTLTASPDGT--LIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp EETTSCEEEEETTTTEEE---EEECCCCSCEEEEEECTTSS--EEEEEETTCEEEEEETTTTE
T ss_pred EeCCCEEEEEECCcchhh---eeecCCCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCc
Confidence 567899999999875432 35778999999999999999 99999999999999998753
No 14
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.50 E-value=1.3e-13 Score=68.41 Aligned_cols=62 Identities=19% Similarity=0.284 Sum_probs=45.9
Q ss_pred ccccCeEEEEECCCCceEeee------EEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQH------LEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGVK 65 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~~ 65 (65)
++.|+.|++||+.++...... ....+|...|.+++|+|++. +|++++.|+.|++||+++|.+
T Consensus 273 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~--~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 273 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ--TLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS--EEEEEETTSCEEEEEEEC---
T ss_pred ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC--EEEEEeCCCEEEEEeCCCcCC
Confidence 456889999998765432211 12346788999999999999 999999999999999999863
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.50 E-value=3.6e-13 Score=67.24 Aligned_cols=56 Identities=21% Similarity=0.392 Sum_probs=49.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
|+.|+.|++||+.++.... .+.+|...|.+++|+|++. .+++++.|+.|++||++.
T Consensus 83 ~s~D~~v~~wd~~~~~~~~---~~~~h~~~v~~~~~~~~~~--~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 83 ASWDKTLRLWDVATGETYQ---RFVGHKSDVMSVDIDKKAS--MIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp EETTSEEEEEETTTTEEEE---EEECCSSCEEEEEECTTSC--EEEEEETTSCEEEEETTS
T ss_pred EeCCCEEEEEECCCCCeeE---EEccCCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCC
Confidence 6789999999998865433 6789999999999999999 999999999999999864
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.50 E-value=2.1e-13 Score=70.08 Aligned_cols=58 Identities=24% Similarity=0.513 Sum_probs=50.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++.... .+.+|...|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus 314 gs~D~~i~iwd~~~~~~~~---~~~~h~~~v~~v~~~~~g~--~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 314 GSRDKTIKMWDVSTGMCLM---TLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp EETTSEEEEEETTTTEEEE---EEECCSSCEEEEEECSSSS--CEEEEETTTEEEEECCTTSC
T ss_pred EeCCCeEEEEECCCCceEE---EEECCCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCc
Confidence 5678999999998765333 6788999999999999999 89999999999999998764
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.50 E-value=1.6e-13 Score=69.56 Aligned_cols=55 Identities=16% Similarity=0.102 Sum_probs=46.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecC-CCCcEEEEEecCCCcEEEEECCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSH-PNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
|+.|+.|++||+.++.... ..+|.+.|.+++|+| ++. +|++++.|++|++|++.+
T Consensus 288 gs~D~~i~iwd~~~~~~~~----~~~H~~~V~~vafsP~d~~--~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 288 ISEDCTVAVLDADFSEVFR----DLSHRDFVTGVAWSPLDHS--KFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EETTSCEEEECTTSCEEEE----ECCCSSCEEEEEECSSSTT--EEEEEETTSCEEEEECC-
T ss_pred EeCCCEEEEEECCCCcEeE----ECCCCCCEEEEEEeCCCCC--EEEEEcCCCeEEEEECCC
Confidence 5678999999998765332 447999999999998 577 899999999999999864
No 18
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.50 E-value=1.2e-13 Score=70.25 Aligned_cols=59 Identities=20% Similarity=0.280 Sum_probs=49.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.... .....+.+|...|.+++|+|++. .+++++.|+++++||+++++
T Consensus 224 gs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~--~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITS--RAVRTYHGHEGDINSVKFFPDGQ--RFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp EETTSCEEEEETTTTC--CCCEEECCCSSCCCEEEECTTSS--EEEEECSSSCEEEEETTTTE
T ss_pred EECCCeEEEEECCCCC--cceEEECCcCCCeEEEEEecCCC--eEEEEcCCCeEEEEECCCCc
Confidence 5779999999987432 12235788999999999999999 99999999999999998763
No 19
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.50 E-value=2.7e-13 Score=68.57 Aligned_cols=57 Identities=16% Similarity=0.301 Sum_probs=49.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++||+.++.... .+.+|...|.+++|+|++. .+++++.|+++++||++.+
T Consensus 216 gs~Dg~v~~wd~~~~~~~~---~~~~h~~~v~~v~~~p~~~--~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 216 GGCDKKAMVWDMRSGQCVQ---AFETHESDVNSVRYYPSGD--AFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp EETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTT
T ss_pred EeCCCeEEEEECCCCcEEE---EecCCCCCeEEEEEeCCCC--EEEEEeCCCeEEEEECCCC
Confidence 5679999999998765433 5788999999999999999 9999999999999999765
No 20
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.49 E-value=1.2e-13 Score=70.92 Aligned_cols=58 Identities=29% Similarity=0.536 Sum_probs=50.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++... ..+.+|...|.+++|+|++. ++++++.|++|++||+.+++
T Consensus 126 ~s~Dg~i~vwd~~~~~~~---~~l~~h~~~V~~v~~~~~~~--~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 126 ASEDATIKVWDYETGDFE---RTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp EESSSCEEEEETTTCCCC---EEECCCSSCEEEEEECTTSS--EEEEEETTSCCCEEETTSSC
T ss_pred EeCCCeEEEEECCCCcEE---EEEeccCCcEEEEEEcCCCC--EEEEEeCCCeEEEEeCCCCc
Confidence 578999999999876533 36889999999999999999 99999999999999997653
No 21
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.49 E-value=2.5e-13 Score=68.01 Aligned_cols=58 Identities=21% Similarity=0.404 Sum_probs=50.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++... ..+.+|...|.+++|+|++. ++++++.|+.|++||+++++
T Consensus 182 g~~dg~i~iwd~~~~~~~---~~~~~h~~~v~~l~~spd~~--~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLL---HTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp EETTSCEEEEETTTTEEE---EEECCCSSCCCEEEECTTSC--EEEEECTTSCEEEEETTTCC
T ss_pred EcCCCeEEEEECCCCcEE---EEEcccCCceeEEEEcCCCC--EEEEEcCCCeEEEEECCCcc
Confidence 567899999999876533 36788999999999999999 99999999999999998653
No 22
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.49 E-value=4.3e-13 Score=67.40 Aligned_cols=55 Identities=20% Similarity=0.468 Sum_probs=48.6
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
++.|+.|++||+.++.... .+.+|...|.+++|+|++. .+++++.|+.|++||+.
T Consensus 94 ~s~D~~v~lwd~~~~~~~~---~~~~h~~~v~~v~~sp~~~--~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYK---RFVGHQSEVYSVAFSPDNR--QILSAGAEREIKLWNIL 148 (343)
T ss_dssp EETTSEEEEEETTSSCEEE---EEECCCSCEEEEEECSSTT--EEEEEETTSCEEEEESS
T ss_pred EcCCCcEEEEECCCCcEEE---EEcCCCCcEEEEEECCCCC--EEEEEcCCCEEEEEecc
Confidence 5779999999998765433 6788999999999999999 99999999999999985
No 23
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.49 E-value=3.6e-13 Score=67.69 Aligned_cols=61 Identities=26% Similarity=0.379 Sum_probs=50.3
Q ss_pred ccccCeEEEEECCCCc----eEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGD----EVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.... ...+...+.+|...|.+++|+|++. ++++++.|++|++||+++++
T Consensus 45 gs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~--~l~s~s~D~~v~lwd~~~~~ 109 (343)
T 2xzm_R 45 GSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC--FAISSSWDKTLRLWDLRTGT 109 (343)
T ss_dssp EETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT--EEEEEETTSEEEEEETTSSC
T ss_pred EcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC--EEEEEcCCCcEEEEECCCCc
Confidence 5779999999986432 1223346789999999999999999 99999999999999998764
No 24
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.49 E-value=1.1e-13 Score=71.30 Aligned_cols=60 Identities=10% Similarity=0.099 Sum_probs=48.2
Q ss_pred CccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCC-CCcEEEEEecCCCcEEEEECCCC
Q 039404 1 VAYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHP-NKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 1 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
+|+.||.|++||+.++... ....+.+|.+.|.+++|+|. +. .|++++.|++|++||++++
T Consensus 137 sGs~dg~i~lWd~~~~~~~-~~~~~~gH~~~V~~l~f~p~~~~--~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 137 VGSKGGDIMLWNFGIKDKP-TFIKGIGAGGSITGLKFNPLNTN--QFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp EEETTSCEEEECSSCCSCC-EEECCCSSSCCCCEEEECSSCTT--EEEEECSSSCEEEEETTSC
T ss_pred EEeCCCEEEEEECCCCCce-eEEEccCCCCCEEEEEEeCCCCC--EEEEEeCCCEEEEeeccCC
Confidence 3678999999999765422 22346689999999999984 56 8999999999999999764
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.49 E-value=4.1e-13 Score=67.48 Aligned_cols=58 Identities=16% Similarity=0.421 Sum_probs=50.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++... ..+.+|...|.+++|+|++. ++++++.|+.|++||++++.
T Consensus 160 ~s~d~~i~~wd~~~~~~~---~~~~~h~~~v~~~~~~~~~~--~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 160 SSGDTTCALWDIETGQQT---TTFTGHTGDVMSLSLAPDTR--LFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp EETTSCEEEEETTTTEEE---EEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCS
T ss_pred EECCCcEEEEECCCCcEE---EEEcCCCCceEEEEECCCCC--EEEEEeCCCcEEEEECCCCe
Confidence 567899999999876533 36788999999999999999 99999999999999998763
No 26
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.48 E-value=5.5e-13 Score=67.49 Aligned_cols=57 Identities=19% Similarity=0.310 Sum_probs=48.9
Q ss_pred ccccCe-EEEEECCCCceEeeeEEee-c-ccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHI-VQIYPCNGGDEVRQHLEID-A-HVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~-i~i~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+. |++||+.++.... .+. + |...|.+++|+|++. ++++++.|+++++||++.+
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~---~~~~g~h~~~v~~~~~s~~~~--~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVR---EFRRGLDRADVVDMKWSTDGS--KLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EETTCSEEEEEETTTCCEEE---EEECTTCCSCEEEEEECTTSC--EEEEEETTCEEEEEESSCC
T ss_pred EeCCCCEEEEEECCCCcEEE---EEEcCCCCCcEEEEEECCCCC--EEEEEECCCEEEEEEccCC
Confidence 577897 9999998765443 565 5 899999999999999 9999999999999999754
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.48 E-value=3.6e-13 Score=68.80 Aligned_cols=58 Identities=14% Similarity=0.423 Sum_probs=50.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++... ..+.+|...|.+++|+|++. .+++++.|+.+++||+++++
T Consensus 141 ~~~d~~i~iwd~~~~~~~---~~~~~h~~~v~~~~~~p~~~--~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIV---MILQGHEQDIYSLDYFPSGD--KLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp EETTSCEEEEETTTTEEE---EEECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTE
T ss_pred EcCCCeEEEEECCCCcEE---EEEccCCCCEEEEEEcCCCC--EEEEecCCCcEEEEECCCCe
Confidence 567899999999876433 36788999999999999999 89999999999999998763
No 28
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.47 E-value=7.1e-13 Score=67.08 Aligned_cols=61 Identities=21% Similarity=0.407 Sum_probs=49.1
Q ss_pred ccccCeEEEEECCCCce------------Eee-eEEeecccccEeEEEecCCCCcEEEEEecCCCc-EEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDE------------VRQ-HLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKT-IKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~------------~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~-i~~w~~~~~~ 64 (65)
|+.++.|++||+.++.. ..+ ...+.+|...|.+++|+|++. ++++++.|++ |++||+++++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~--~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD--MVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS--EEEEEETTCSEEEEEETTTCC
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC--EEEEEeCCCCEEEEEECCCCc
Confidence 56789999999976430 011 346789999999999999999 9999999998 9999998764
No 29
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.46 E-value=2.3e-13 Score=69.58 Aligned_cols=59 Identities=12% Similarity=0.089 Sum_probs=48.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|++|++||+.++.... .+..|...+.+++|+|++.. ++++++.|++|++||+++++
T Consensus 162 ~s~D~tv~~Wd~~~~~~~~---~~~~~~~~v~~v~~~p~~~~-~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPIL---AGYPLSSPGISVQFRPSNPN-QLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EETTSEEEEEEEETTEEEE---EEEECSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCCC
T ss_pred EECCCeEEEEECCCCceee---eecCCCCCcEEEEECCCCCc-eEEecCCCCEEEEEECCCCc
Confidence 5789999999997654332 45568889999999998764 79999999999999998764
No 30
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.46 E-value=4.3e-13 Score=66.93 Aligned_cols=60 Identities=13% Similarity=0.407 Sum_probs=49.0
Q ss_pred CccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCC----CcEEEEEecCCCcEEEEECCC
Q 039404 1 VAYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPN----KQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 1 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~l~s~~~~~~i~~w~~~~ 62 (65)
+|+.|+.|++||+...........+.+|...|.+++|+|++ . .+++++.|++|++|++.+
T Consensus 184 sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~--~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 184 SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS--TIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC--EEEEEETTCEEEEEECSS
T ss_pred EecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc--eEEEEcCCCeEEEEEccC
Confidence 36779999999987543233344678999999999999986 6 899999999999999875
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.46 E-value=5.3e-13 Score=66.06 Aligned_cols=59 Identities=22% Similarity=0.516 Sum_probs=48.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCC--CCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHP--NKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++|++.... ......+.+|.+.|.+++|+++ +. ++++++.|++|++||++++
T Consensus 27 ~s~D~~v~iw~~~~~~-~~~~~~l~gH~~~V~~v~~s~~~~g~--~l~s~s~D~~v~iWd~~~~ 87 (297)
T 2pm7_B 27 CSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGT--ILASCSYDGKVMIWKEENG 87 (297)
T ss_dssp EETTSCEEEEEBCSSC-BCCCEEECCCSSCEEEEEECCGGGCS--EEEEEETTTEEEEEEBSSS
T ss_pred EeCCCEEEEEecCCCC-cEEEEEEccccCCeEEEEecCCCcCC--EEEEEcCCCEEEEEEcCCC
Confidence 5779999999986432 1233468899999999999864 67 8999999999999999765
No 32
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.45 E-value=9.5e-13 Score=66.31 Aligned_cols=59 Identities=22% Similarity=0.398 Sum_probs=49.6
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.+++|+...+. ......+.+|...|.+++|+|++. ++++++.|+.|++||++++
T Consensus 79 ~s~D~~v~iw~~~~~~-~~~~~~~~~h~~~v~~v~~sp~~~--~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 79 ASFDATTCIWKKNQDD-FECVTTLEGHENEVKSVAWAPSGN--LLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp EETTSCEEEEEECCC--EEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEEECTT
T ss_pred EECCCcEEEEEccCCC-eEEEEEccCCCCCceEEEEeCCCC--EEEEEECCCeEEEEECCCC
Confidence 5679999999987653 233446789999999999999999 9999999999999998764
No 33
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.45 E-value=5.4e-13 Score=67.20 Aligned_cols=60 Identities=17% Similarity=0.310 Sum_probs=48.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++|++..+..........+|...|.+++|+|++. ++++++.|+.+++|++..+
T Consensus 34 ~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~--~l~s~s~D~~v~iw~~~~~ 93 (345)
T 3fm0_A 34 CGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN--YLASASFDATTCIWKKNQD 93 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS--EEEEEETTSCEEEEEECCC
T ss_pred EcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC--EEEEEECCCcEEEEEccCC
Confidence 57799999999876543322223468999999999999999 9999999999999998654
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.45 E-value=7.8e-13 Score=70.67 Aligned_cols=58 Identities=16% Similarity=0.245 Sum_probs=49.6
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||..+... ...+.+|...|.+++|+|++. ++++++.|++|++||..+++
T Consensus 166 ~s~D~~v~lwd~~~~~~---~~~l~~H~~~V~~v~fspdg~--~las~s~D~~i~lwd~~~g~ 223 (611)
T 1nr0_A 166 GSDDNTVAIFEGPPFKF---KSTFGEHTKFVHSVRYNPDGS--LFASTGGDGTIVLYNGVDGT 223 (611)
T ss_dssp EETTSCEEEEETTTBEE---EEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCC
T ss_pred EeCCCeEEEEECCCCeE---eeeeccccCceEEEEECCCCC--EEEEEECCCcEEEEECCCCc
Confidence 57799999999876432 336889999999999999999 99999999999999987653
No 35
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.45 E-value=9.2e-13 Score=67.06 Aligned_cols=61 Identities=18% Similarity=0.206 Sum_probs=49.4
Q ss_pred ccccCeEEEEECCCCceEeeeE-EeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHL-EIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||...+....... ...+|.+.|.+++|+|++. ++++++.|+.|++|++..++
T Consensus 316 g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~--~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 316 GYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGS--ALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSS--EEEEECTTSCEEEEECCSSS
T ss_pred EECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCC--EEEEeeCCCCEEEEecCCCc
Confidence 5678999999987765433211 1257899999999999999 99999999999999998764
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.45 E-value=5.7e-13 Score=66.48 Aligned_cols=59 Identities=25% Similarity=0.556 Sum_probs=48.6
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCC--CCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHP--NKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++||+.++. ......+.+|...|.+++|+++ +. .+++++.|++|++||++++
T Consensus 31 gs~D~~v~lwd~~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~~--~l~s~s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 31 CSSDRSVKIFDVRNGG-QILIADLRGHEGPVWQVAWAHPMYGN--ILASCSYDRKVIIWREENG 91 (316)
T ss_dssp EETTTEEEEEEEETTE-EEEEEEEECCSSCEEEEEECCGGGSS--CEEEEETTSCEEEECCSSS
T ss_pred EeCCCeEEEEEecCCC-cEEEEEEcCCCccEEEEEeCCCCCCC--EEEEEECCCEEEEEECCCC
Confidence 6789999999997653 2233468899999999999864 66 8999999999999999875
No 37
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.44 E-value=1.9e-12 Score=64.11 Aligned_cols=58 Identities=17% Similarity=0.420 Sum_probs=50.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+.+|...+.+++|+|++. ++++++.|+.+++||+++++
T Consensus 83 ~~~d~~i~vwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 83 ASDDKTLKIWDVSSGKCLK---TLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp EETTSEEEEEETTTCCEEE---EEECCSSCEEEEEECSSSS--EEEEEETTSCEEEEETTTCC
T ss_pred ECCCCEEEEEECCCCcEEE---EEcCCCCCEEEEEEcCCCC--EEEEEeCCCcEEEEECCCCE
Confidence 5678999999998765433 6788999999999999999 99999999999999998764
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.44 E-value=7.4e-13 Score=66.38 Aligned_cols=60 Identities=15% Similarity=0.330 Sum_probs=48.7
Q ss_pred ccccCeEEEEECCC-CceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNG-GDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++||+.. +........+.+|...|.+++|+|++. ++++++.|++|++|+..++
T Consensus 125 ~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 125 CSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA--LLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp EETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS--EEEEEETTSCEEEEEEETT
T ss_pred EeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC--EEEEEcCCCeEEEEECCCC
Confidence 57799999999943 222333446788999999999999999 9999999999999987543
No 39
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.44 E-value=3.7e-13 Score=68.22 Aligned_cols=59 Identities=17% Similarity=0.215 Sum_probs=49.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++... ..+.+|...|.+++|+|++.. +|++++.|++|++||+++++
T Consensus 245 g~~d~~i~~wd~~~~~~~---~~~~~~~~~v~~l~~sp~~~~-~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 245 GDETGNVSLVNIKNPDSA---QTSAVHSQNITGLAYSYHSSP-FLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp EESSSCEEEEESSCGGGC---EEECCCSSCEEEEEECSSSSC-CEEEEETTSCEEEECTTSCE
T ss_pred eecccceeEEECCCCcEe---EEEeccceeEEEEEEcCCCCC-EEEEEeCCCEEEEEECCCCc
Confidence 567899999999875433 367889999999999998754 79999999999999998764
No 40
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.44 E-value=1.1e-12 Score=65.07 Aligned_cols=58 Identities=17% Similarity=0.273 Sum_probs=49.7
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.+..... .+.+|...|.+++|+|++. ++++++.|+.|++||+++++
T Consensus 191 ~~~d~~i~i~d~~~~~~~~---~~~~h~~~v~~~~~s~~~~--~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKT---NHIGHTGYLNTVTVSPDGS--LCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp EETTSCEEEEETTTTEEEE---EECCCSSCEEEEEECTTSS--EEEEEETTCEEEEEETTTTE
T ss_pred EcCCCEEEEEECCCCceee---EecCCCCcEEEEEECCCCC--EEEEEeCCCeEEEEEeccCc
Confidence 4578899999998765333 5778999999999999999 99999999999999998753
No 41
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.44 E-value=9e-13 Score=65.25 Aligned_cols=59 Identities=22% Similarity=0.415 Sum_probs=48.4
Q ss_pred ccccCeEEEEECCCCc-eEeeeEEeecccccEeEEEecCCC---CcEEEEEecCCCcEEEEECCC
Q 039404 2 AYSRHIVQIYPCNGGD-EVRQHLEIDAHVGGVNDIAFSHPN---KQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~---~~~~l~s~~~~~~i~~w~~~~ 62 (65)
|+.|+.|++||+.++. .......+.+|...|.+++|+|++ . ++++++.|++|++||+++
T Consensus 176 gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~--~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 176 GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS--YMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE--EEEEEETTSCEEEEEESS
T ss_pred EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCce--EEEEEECCCcEEEEEeCC
Confidence 5679999999987643 222344678999999999999985 5 899999999999999865
No 42
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.43 E-value=1.2e-12 Score=66.70 Aligned_cols=58 Identities=24% Similarity=0.463 Sum_probs=50.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+.+|...|.+++|+|++. .+++++.|+.+++||+++++
T Consensus 157 ~s~d~~i~iwd~~~~~~~~---~~~~h~~~v~~~~~~~~~~--~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 157 SSQDMQLKIWSVKDGSNPR---TLIGHRATVTDIAIIDRGR--NVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp EETTSEEEEEETTTCCCCE---EEECCSSCEEEEEEETTTT--EEEEEETTSCEEEEETTTTE
T ss_pred EeCCCeEEEEeCCCCcCce---EEcCCCCcEEEEEEcCCCC--EEEEEcCCCcEEEeECCCCc
Confidence 5678999999998765333 5788999999999999999 89999999999999998763
No 43
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.42 E-value=1.2e-12 Score=70.66 Aligned_cols=58 Identities=21% Similarity=0.335 Sum_probs=50.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.+.... ..+.+|.+.|.+++|+|++. ++++++.|+.|++||+++++
T Consensus 537 ~s~d~~v~vwd~~~~~~~---~~~~~h~~~v~~v~~spdg~--~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 537 ASWDKTVKVWNLSNCKLR---STLAGHTGYVSTVAVSPDGS--LCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EETTSCEEEEETTTCCEE---EEECCCSSCEEEEEECTTSS--EEEEEETTSBCEEEETTTTE
T ss_pred EeCCCeEEEEECCCCcEE---EEEcCCCCCEEEEEEeCCCC--EEEEEeCCCeEEEEECCCCc
Confidence 567899999999875433 36788999999999999999 99999999999999998764
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.42 E-value=2.7e-12 Score=63.56 Aligned_cols=58 Identities=28% Similarity=0.619 Sum_probs=49.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++|+..++.... .+.+|...|.+++|+|++. ++++++.|+.+++||+.+++
T Consensus 41 ~~~dg~i~iw~~~~~~~~~---~~~~h~~~v~~~~~~~~~~--~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 41 SSADKLIKIWGAYDGKFEK---TISGHKLGISDVAWSSDSN--LLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp EETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCC
T ss_pred eeCCCeEEEEeCCCcccch---hhccCCCceEEEEEcCCCC--EEEEECCCCEEEEEECCCCc
Confidence 5678999999998765333 5778999999999999999 99999999999999998764
No 45
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.41 E-value=7.3e-14 Score=71.43 Aligned_cols=60 Identities=20% Similarity=0.300 Sum_probs=48.2
Q ss_pred ccccCeEEEEECCCCceEe--eeEEeecccccEeEEEecC--------CCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVR--QHLEIDAHVGGVNDIAFSH--------PNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~--------~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|++|++||...+.... ....+.+|.+.|.+++|+| ++. +|++++.|+++++||++++
T Consensus 107 ~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~--~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 107 VCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ--VIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE--EEEEEETTSEEEEEEEETT
T ss_pred EeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC--EEEEEECCCeEEEEECCCC
Confidence 5679999999987764322 2234678999999999987 566 8999999999999998654
No 46
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.41 E-value=3.3e-12 Score=63.75 Aligned_cols=58 Identities=26% Similarity=0.490 Sum_probs=50.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+.+|...|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus 50 ~~~dg~i~vwd~~~~~~~~---~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~ 107 (369)
T 3zwl_B 50 CSKDSSASVWYSLNGERLG---TLDGHTGTIWSIDVDCFTK--YCVTGSADYSIKLWDVSNGQ 107 (369)
T ss_dssp EESSSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSS--EEEEEETTTEEEEEETTTCC
T ss_pred EeCCCEEEEEeCCCchhhh---hhhhcCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCc
Confidence 5678999999998765433 6788999999999999999 99999999999999998764
No 47
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.41 E-value=4.6e-12 Score=64.12 Aligned_cols=58 Identities=19% Similarity=0.346 Sum_probs=49.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCC--CCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHP--NKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+.+|...+.+++|+|. +. .+++++.|+.+++||+++++
T Consensus 172 ~s~D~~v~lwd~~~~~~~~---~~~~h~~~v~~~~~~~~~~g~--~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 172 ASGDGTCALWDVESGQLLQ---SFHGHGADVLCLDLAPSETGN--TFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp EETTSEEEEEETTTCCEEE---EEECCSSCEEEEEECCCSSCC--EEEEEETTSCEEEEETTTCC
T ss_pred EeCCCcEEEEeCCCCeEEE---EEcCCCCCeEEEEEEeCCCCC--EEEEEeCCCeEEEEECCCCc
Confidence 5679999999998765433 67889999999999874 56 89999999999999998764
No 48
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.41 E-value=2.9e-12 Score=63.95 Aligned_cols=58 Identities=17% Similarity=0.359 Sum_probs=49.5
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecC-CCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSH-PNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++.... .+.+|...|.+++|+| ++. ++++++.|+.|++||+++++
T Consensus 91 ~~~dg~i~v~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIK---HYVGHGNAINELKFHPRDPN--LLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp EETTCEEEEECTTTCCEEE---EEESCCSCEEEEEECSSCTT--EEEEEETTSCEEEEETTTTE
T ss_pred ecCCCEEEEEEchhceEee---eecCCCCcEEEEEECCCCCC--EEEEEeCCCeEEEEEeecCe
Confidence 5678999999998765433 5778999999999999 777 99999999999999998763
No 49
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.4e-12 Score=64.56 Aligned_cols=58 Identities=24% Similarity=0.457 Sum_probs=42.5
Q ss_pred ccccCeEEEEECCCCc----eEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 2 AYSRHIVQIYPCNGGD----EVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
++.|+.|++|+..... .......+.+|...|.+++|+|++. ++++++.|+.|++||++
T Consensus 76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~--~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 76 GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY--YLATCSRDKSVWIWETD 137 (330)
T ss_dssp EETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC--EEEEEETTSCEEEEECC
T ss_pred EeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC--EEEEEeCCCEEEEEecc
Confidence 5679999999985321 1223446788999999999999999 99999999999999994
No 50
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.40 E-value=2.5e-12 Score=68.76 Aligned_cols=58 Identities=22% Similarity=0.390 Sum_probs=48.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEee-------cccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEID-------AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||..++.... .+. +|.+.|.+++|+|++. .+++++.|++|++||+.+++
T Consensus 208 ~s~D~~i~lwd~~~g~~~~---~~~~~~~~~~~h~~~V~~v~~spdg~--~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 208 TGGDGTIVLYNGVDGTKTG---VFEDDSLKNVAHSGSVFGLTWSPDGT--KIASASADKTIKIWNVATLK 272 (611)
T ss_dssp EETTSCEEEEETTTCCEEE---ECBCTTSSSCSSSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTE
T ss_pred EECCCcEEEEECCCCcEee---eeccccccccccCCCEEEEEECCCCC--EEEEEeCCCeEEEEeCCCCc
Confidence 5789999999988765433 332 7999999999999999 99999999999999998753
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.40 E-value=1.7e-12 Score=64.13 Aligned_cols=42 Identities=26% Similarity=0.460 Sum_probs=36.9
Q ss_pred eeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 21 QHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 21 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
....+.+|...|.+++|+|++. ++++++.|+.|++|++.+++
T Consensus 298 ~~~~~~~h~~~v~~~~~s~~~~--~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 298 LLSEHDDHNGEVWSVSWNLTGT--ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEECTTSSCEEEEEECSSSC--CEEEEETTSCEEEEEECTTS
T ss_pred EEEEEecccccEEEEEEcCCCC--EEEEecCCCcEEEEecCcCc
Confidence 3445778999999999999999 89999999999999998764
No 52
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.39 E-value=3.1e-13 Score=69.67 Aligned_cols=61 Identities=21% Similarity=0.181 Sum_probs=49.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.............+|...|.+++|+|++. +|++++.|+.|++||+.++.
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~--~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA--RLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS--EEEEEESSSCEEEEESSSSS
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCC--eeEEEcCCCEEEEEECCCCc
Confidence 56789999999976442222223457889999999999999 99999999999999998753
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.39 E-value=2.4e-12 Score=65.54 Aligned_cols=58 Identities=17% Similarity=0.308 Sum_probs=49.5
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++... ..+.+|...|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus 115 ~~~dg~i~iwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~--~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 115 GTTEGDIKVLDSNFNLQR---EIDQAHVSEITKLKFFPSGE--ALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp EETTSCEEEECTTSCEEE---EETTSSSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCC
T ss_pred EECCCCEEEEeCCCccee---eecccccCccEEEEECCCCC--EEEEEeCCCeEEEEeCCCCc
Confidence 567899999999865433 24578999999999999999 99999999999999998764
No 54
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.39 E-value=3.2e-12 Score=64.22 Aligned_cols=58 Identities=14% Similarity=0.304 Sum_probs=47.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEeec-ccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDA-HVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++.... ..+.. |...|.+++|+|++. ++++++. +.|++||+++++
T Consensus 188 g~~dg~i~iwd~~~~~~~~--~~~~~~h~~~v~~l~fs~~g~--~l~s~~~-~~v~iwd~~~~~ 246 (343)
T 3lrv_A 188 YSPDGILDVYNLSSPDQAS--SRFPVDEEAKIKEVKFADNGY--WMVVECD-QTVVCFDLRKDV 246 (343)
T ss_dssp ECTTSCEEEEESSCTTSCC--EECCCCTTSCEEEEEECTTSS--EEEEEES-SBEEEEETTSST
T ss_pred EcCCCEEEEEECCCCCCCc--cEEeccCCCCEEEEEEeCCCC--EEEEEeC-CeEEEEEcCCCC
Confidence 5789999999998765331 24566 999999999999999 8999884 499999998764
No 55
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.39 E-value=5.5e-12 Score=64.72 Aligned_cols=58 Identities=19% Similarity=0.249 Sum_probs=49.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeec--ccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDA--HVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+.+ |...|.+++|+|++. ++++++.|+.|++||+++++
T Consensus 188 ~~~d~~i~iwd~~~~~~~~---~~~~~~h~~~v~~~~~s~~~~--~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQ---IIENSPRHGAVSSICIDEECC--VLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp EETTSEEEEEETTTCCEEE---EEECCGGGCCEEEEEECTTSC--EEEEEETTSCEEEEETTTTE
T ss_pred EeCCCeEEEEeCCCCeeeE---EEccCCCCCceEEEEECCCCC--EEEEEcCCCeEEEEEcCCcc
Confidence 5678999999998765433 4555 788999999999999 99999999999999998753
No 56
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.39 E-value=3.9e-12 Score=66.92 Aligned_cols=54 Identities=28% Similarity=0.497 Sum_probs=46.2
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
|+.|+.|++||.. +.. +..+.+|...|.+++|+|++. +|++++.|+.|++||..
T Consensus 34 ~~~d~~v~iWd~~-~~~---~~~l~gh~~~V~~l~fspdg~--~las~~~d~~i~vWd~~ 87 (577)
T 2ymu_A 34 ASDDKTVKLWNRN-GQL---LQTLTGHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNRN 87 (577)
T ss_dssp EETTSEEEEECTT-SCE---EEEEECCSSCEEEEEECTTSS--EEEEEETTSCEEEEETT
T ss_pred EeCCCEEEEEECC-CCE---EEEEeCCCCCEEEEEECCCCC--EEEEEeCCCEEEEEECC
Confidence 5678999999964 332 336889999999999999999 99999999999999964
No 57
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.38 E-value=6.1e-12 Score=62.78 Aligned_cols=59 Identities=25% Similarity=0.383 Sum_probs=49.3
Q ss_pred ccccCeEEEEECCC-CceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNG-GDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++|++.+ +... ...+.+|...|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus 60 ~~~dg~i~iw~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~v~iwd~~~~~ 119 (368)
T 3mmy_A 60 GSWANDVRCWEVQDSGQTI--PKAQQMHTGPVLDVCWSDDGS--KVFTASCDKTAKMWDLSSNQ 119 (368)
T ss_dssp EETTSEEEEEEECTTSCEE--EEEEEECSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTE
T ss_pred ECCCCcEEEEEcCCCCcee--EEEeccccCCEEEEEECcCCC--EEEEEcCCCcEEEEEcCCCC
Confidence 56789999999986 3322 235778999999999999999 99999999999999998763
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.37 E-value=5.1e-12 Score=63.82 Aligned_cols=58 Identities=14% Similarity=0.215 Sum_probs=48.8
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.++.|++||+.++.... .+.+|...|.+++|+|++. ++++++.|+.|++|++.+++
T Consensus 310 ~~~~~~i~v~d~~~~~~~~---~~~~~~~~v~~~~~s~~~~--~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 310 VPYGSTIAVYTVYSGEQIT---MLKGHYKTVDCCVFQSNFQ--ELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEETTEEEEEETTTCCEEE---EECCCSSCEEEEEEETTTT--EEEEEETTSCEEEEEECC--
T ss_pred EecCCEEEEEECcCCccee---eeccCCCeEEEEEEcCCCC--EEEEECCCCeEEEEeCCCCC
Confidence 3467899999998765443 6788999999999999999 99999999999999998764
No 59
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.37 E-value=4.1e-12 Score=68.57 Aligned_cols=56 Identities=23% Similarity=0.434 Sum_probs=48.7
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
|+.|+.|++||+.++.... .+.+|...|.+++|+|++. .+++++.|++|++||...
T Consensus 448 gs~Dg~v~vwd~~~~~~~~---~~~~h~~~v~~~~~s~~~~--~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 448 GSWDGELRLWDLAAGVSTR---RFVGHTKDVLSVAFSLDNR--QIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp EETTSEEEEEETTTTEEEE---EEECCSSCEEEEEECTTSS--CEEEEETTSCEEEECTTS
T ss_pred EeCCCcEEEEECCCCccee---EEeCCCCCEEEEEEeCCCC--EEEEEeCCCEEEEEECCC
Confidence 6789999999998765333 6789999999999999999 899999999999999753
No 60
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.37 E-value=8.8e-12 Score=61.56 Aligned_cols=60 Identities=15% Similarity=0.298 Sum_probs=49.3
Q ss_pred ccccCeEEEEECCCCc-eEeeeEEeecccccEeEEEecC--CCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGD-EVRQHLEIDAHVGGVNDIAFSH--PNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++|++.++. .......+.+|...|.+++|+| ++. ++++++.|+.|++||++++
T Consensus 29 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~--~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 29 CSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR--IIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp EETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS--EEEEEETTSCEEEEEECTT
T ss_pred eeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC--EEEEEcCCCeEEEEecCCC
Confidence 5678999999997643 2233456788999999999999 477 8999999999999999765
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.36 E-value=5e-12 Score=64.49 Aligned_cols=58 Identities=19% Similarity=0.382 Sum_probs=49.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEe--ecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEI--DAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+ .+|...|.+++|+|++. .+++++.|+.|++||+++++
T Consensus 150 ~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAAVL---TLGPDVHPDTIYSVDWSRDGA--LICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp EETTSCEEEEETTTTEEEE---EECTTTCCSCEEEEEECTTSS--CEEEEETTSEEEEEETTTTE
T ss_pred EcCCCEEEEEECCCCCccE---EEecCCCCCceEEEEECCCCC--EEEEEecCCcEEEEeCCCCc
Confidence 5678999999998764333 45 67899999999999998 89999999999999998763
No 62
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.36 E-value=8.2e-12 Score=62.73 Aligned_cols=58 Identities=7% Similarity=0.004 Sum_probs=47.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEe-ecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEI-DAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .. ..+...+.+++|+|++. ++++++.|+.|++||+++++
T Consensus 145 ~s~dg~i~~wd~~~~~~~~---~~~~~~~~~i~~~~~~pdg~--~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 145 ADNRGTIGFQSYEDDSQYI---VHSAKSDVEYSSGVLHKDSL--LLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp EETTCCEEEEESSSSCEEE---EECCCSSCCCCEEEECTTSC--EEEEECTTSCEEEEESSCTT
T ss_pred EeCCCcEEEEECCCCcEEE---EEecCCCCceEEEEECCCCC--EEEEEcCCCEEEEEECCCCC
Confidence 5779999999998765422 22 34556799999999999 99999999999999998764
No 63
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.35 E-value=7e-12 Score=63.96 Aligned_cols=62 Identities=21% Similarity=0.412 Sum_probs=50.1
Q ss_pred ccccCeEEEEECCCCceE----eeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEV----RQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++|++.++... .....+.+|...|.+++|+|++.. ++++++.|+.|++||+++++
T Consensus 100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~-~l~s~~~dg~i~iwd~~~~~ 165 (402)
T 2aq5_A 100 GSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQN-VLLSAGCDNVILVWDVGTGA 165 (402)
T ss_dssp EETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTT-EEEEEETTSCEEEEETTTTE
T ss_pred EeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCC-EEEEEcCCCEEEEEECCCCC
Confidence 567999999999765211 233467889999999999999833 89999999999999998763
No 64
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.35 E-value=3.6e-12 Score=63.62 Aligned_cols=60 Identities=15% Similarity=0.359 Sum_probs=49.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++||+.++........+.+|...|.+++|+|++. .+++++.|+.+++||++++
T Consensus 134 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 134 VSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE--KIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp EETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSS--EEEEEETTSCEEEEESCSH
T ss_pred EeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCC--EEEEecCCCCEEEEECCCC
Confidence 56789999999987654432112267899999999999999 9999999999999999865
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.34 E-value=4.2e-12 Score=63.29 Aligned_cols=61 Identities=10% Similarity=0.024 Sum_probs=48.0
Q ss_pred ccccCeEEEEECCCCceE----------------eeeEEeecccccEeEEEecCCCCcEEEE-EecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEV----------------RQHLEIDAHVGGVNDIAFSHPNKQLYVI-TCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~----------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+...... .....+.+|...|.+++|+|++. .++ +++.|+.+++|++.+.+
T Consensus 278 ~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 278 AGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKR--GLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSST--TEEEEEETTSEEEEEEECC--
T ss_pred EeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCC--eEEEEecCCCcEEEEECCCcc
Confidence 567899999998643211 34456788999999999999998 666 89999999999998754
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.34 E-value=1.1e-11 Score=64.00 Aligned_cols=58 Identities=19% Similarity=0.360 Sum_probs=50.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+.+|...+.+++|+|++. .+++++.|+.|++||+++++
T Consensus 286 ~~~d~~i~vwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~--~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 286 GSYDNTLIVWDVAQMKCLY---ILSGHTDRIYSTIYDHERK--RCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp EETTSCEEEEETTTTEEEE---EECCCSSCEEEEEEETTTT--EEEEEETTSCEEEEETTTTE
T ss_pred EeCCCeEEEEECCCCcEEE---EecCCCCCEEEEEEcCCCC--EEEEEeCCCcEEEEECCCCc
Confidence 5678999999998765333 5778999999999999999 99999999999999998764
No 67
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.34 E-value=9.6e-12 Score=63.17 Aligned_cols=58 Identities=12% Similarity=0.093 Sum_probs=49.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCC-CcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPN-KQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+.+|...+.+++|+|++ . ++++++.|+.|++|++.++.
T Consensus 281 ~~~dg~v~~wd~~~~~~~~---~~~~~~~~v~~~~~s~~~~~--~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 281 SGRDNTVLLWNPESAEQLS---QFPARGNWCFKTKFAPEAPD--LFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EESSSEEEEECSSSCCEEE---EEECSSSCCCCEEECTTCTT--EEEECCSSSEEEEEESCCCC
T ss_pred EeCCCCEEEeeCCCCccce---eecCCCCceEEEEECCCCCC--EEEEEecCCcEEEEEccCCC
Confidence 5678999999998765333 677899999999999998 6 89999999999999997653
No 68
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.33 E-value=1.4e-11 Score=62.95 Aligned_cols=60 Identities=18% Similarity=0.341 Sum_probs=46.0
Q ss_pred ccccCeEEEEECCCCceEeee----EEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQH----LEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++||+.++...... ....+|...|.+++|+|++. .+++++.|+.|++||+++.
T Consensus 225 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~--~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 225 GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ--SVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp EETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS--EEEEEETTSEEEEEEC---
T ss_pred EcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC--EEEEEeCCCEEEEEECCCC
Confidence 567899999999876533321 11257889999999999999 9999999999999998753
No 69
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.33 E-value=1.3e-11 Score=69.50 Aligned_cols=58 Identities=31% Similarity=0.630 Sum_probs=50.8
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||..++.... .+.+|...|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus 633 ~~~d~~i~vw~~~~~~~~~---~~~~h~~~v~~~~~s~~~~--~l~s~~~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 633 CGADKTLQVFKAETGEKLL---DIKAHEDEVLCCAFSSDDS--YIATCSADKKVKIWDSATGK 690 (1249)
T ss_dssp EETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCC
T ss_pred EeCCCeEEEEECCCCCEEE---EeccCCCCEEEEEEecCCC--EEEEEeCCCeEEEEECCCCc
Confidence 5678999999998865433 6788999999999999999 99999999999999998764
No 70
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.33 E-value=6e-12 Score=66.25 Aligned_cols=52 Identities=27% Similarity=0.514 Sum_probs=44.6
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEE
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWD 59 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~ 59 (65)
++.|+.|++||.. +... ..+.+|.+.|.+++|+|++. +|++++.|+.|++||
T Consensus 526 ~~~dg~v~lwd~~-~~~~---~~~~~h~~~v~~~~fs~dg~--~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 526 ASDDKTVKLWNRN-GQLL---QTLTGHSSSVWGVAFSPDGQ--TIASASSDKTVKLWN 577 (577)
T ss_dssp EETTSEEEEECTT-SCEE---EEEECCSSCEEEEEECTTSS--CEEEEETTSCEEEEC
T ss_pred EECcCEEEEEeCC-CCEE---EEEcCCCCCEEEEEEcCCCC--EEEEEeCCCEEEEeC
Confidence 5678999999974 3323 36789999999999999999 899999999999997
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.32 E-value=1.3e-11 Score=62.47 Aligned_cols=58 Identities=14% Similarity=0.221 Sum_probs=47.5
Q ss_pred ccccCeEEEEECCCCceEeeeEEee------cc---------------cccEeEEEecCCC----------CcEEEEEec
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEID------AH---------------VGGVNDIAFSHPN----------KQLYVITCG 50 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~----------~~~~l~s~~ 50 (65)
++.|+.|++||+.++.... .+. +| ...|.+++|+|++ . ++++++
T Consensus 309 ~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~--~l~s~~ 383 (397)
T 1sq9_A 309 AGWDGKLRFWDVKTKERIT---TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNE--SLCCVC 383 (397)
T ss_dssp EETTSEEEEEETTTTEEEE---EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSC--EEEEEE
T ss_pred EeCCCeEEEEEcCCCceeE---EEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccc--eEEEec
Confidence 5678999999998765333 455 66 8899999999998 6 899999
Q ss_pred CCCcEEEEECCCCC
Q 039404 51 DDKTIKVWDATNGV 64 (65)
Q Consensus 51 ~~~~i~~w~~~~~~ 64 (65)
.|+.|++|++.+|+
T Consensus 384 ~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 384 LDRSIRWFREAGGK 397 (397)
T ss_dssp TTTEEEEEEEEC--
T ss_pred CCCcEEEEEcCCCC
Confidence 99999999998764
No 72
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.31 E-value=2.2e-11 Score=62.25 Aligned_cols=60 Identities=20% Similarity=0.384 Sum_probs=49.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++|++.++. ......+.+|...|.+++|+|++. ++++++.|+.|++|++.+++
T Consensus 323 g~~dg~i~v~~~~~~~-~~~~~~~~~h~~~v~~~~~s~dg~--~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 323 GFPDNNLSIWSYSSSG-LTKQVDIPAHDTRVLYSALSPDGR--ILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp CTTTCEEEEEEEETTE-EEEEEEEECCSSCCCEEEECTTSS--EEEEECTTSEEEEEECCC--
T ss_pred ecCCCcEEEEecCCcc-ceeEEEecCCCCCEEEEEECCCCC--EEEEEeCCCcEEEEECCCCc
Confidence 4478999999997653 333345678999999999999999 99999999999999998764
No 73
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.31 E-value=2.1e-12 Score=65.12 Aligned_cols=61 Identities=15% Similarity=0.309 Sum_probs=46.2
Q ss_pred CccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 1 VAYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 1 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
+++.|+.|++|++.++. ......+.+|...|.+++|+|++. ++++++.|+.+++||+.+++
T Consensus 28 ~~~~d~~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 28 TTTATNQVELYEQDGNG-WKHARTFSDHDKIVTCVDWAPKSN--RIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CCCSSSCBCEEEEETTE-EEECCCBCCCSSCEEEEEECTTTC--CEEEEETTSSEEEC------
T ss_pred EecCCCEEEEEEccCCc-eEEEEEEecCCceEEEEEEeCCCC--EEEEEeCCCeEEEEEcCCCC
Confidence 35678999999998652 233346788999999999999998 89999999999999998754
No 74
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.31 E-value=4.1e-12 Score=67.51 Aligned_cols=59 Identities=12% Similarity=0.135 Sum_probs=47.2
Q ss_pred CccccCeEEEEECCCCceEeeeEEeecccccEeEE--EecCCC-CcEEEEEecCCCcEEEEECCCC
Q 039404 1 VAYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDI--AFSHPN-KQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 1 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
+|+.|++|++||+.++.. +...+.+|...|.++ .|++++ . ++++++.|+++++||++++
T Consensus 282 sgs~DgtV~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~g~~--~laS~S~D~tvklWD~~~~ 343 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDFEDT--VVSTVAVDGYFYIFNPKDI 343 (524)
T ss_dssp EEETTSEEEEEETTBCSS--CSEEEECSSSCEEEEEEECCTTSCC--EEEEEETTSEEEEECGGGH
T ss_pred EEeCCCEEEEEECCCCCC--ceEEeecccccEEEEEEEcCCCCCe--EEEEeccCCeEEEEECCCC
Confidence 367899999999986422 223477899999999 567776 6 8999999999999998754
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.29 E-value=2.1e-11 Score=61.11 Aligned_cols=60 Identities=22% Similarity=0.419 Sum_probs=49.5
Q ss_pred ccccCeEEEEECCCCc-eEeeeEEeecccccEeEEEecCC---CCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGD-EVRQHLEIDAHVGGVNDIAFSHP---NKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++||+.... .......+.+|...|.+++|+|+ +. ++++++.|+.+++||++++
T Consensus 178 ~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~--~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 178 GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS--YLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE--EEEEEETTSCEEEEEESST
T ss_pred EeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC--eEEEEeCCCEEEEEeCCCC
Confidence 5678999999987543 23344567789999999999999 67 8999999999999999875
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.29 E-value=2.1e-11 Score=62.99 Aligned_cols=57 Identities=23% Similarity=0.579 Sum_probs=48.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++... ..+.+|.+.|.+++|++++ .+++++.|+.|++||+++++
T Consensus 138 gs~dg~i~vwd~~~~~~~---~~~~~h~~~V~~l~~~~~~---~l~s~s~dg~i~vwd~~~~~ 194 (464)
T 3v7d_B 138 GADDKMIRVYDSINKKFL---LQLSGHDGGVWALKYAHGG---ILVSGSTDRTVRVWDIKKGC 194 (464)
T ss_dssp EETTSCEEEEETTTTEEE---EEECCCSSCEEEEEECSTT---EEEEEETTSCEEEEETTTTE
T ss_pred EcCCCcEEEEECCCCcEE---EEEeCCCcCEEEEEEcCCC---EEEEEeCCCCEEEEECCCCc
Confidence 678999999999876533 3678999999999998765 58899999999999998763
No 77
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.29 E-value=3.3e-11 Score=60.13 Aligned_cols=57 Identities=23% Similarity=0.376 Sum_probs=48.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEe--cCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAF--SHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++... ....|...|.+++| ++++. ++++++.|+.+++||+++++
T Consensus 104 ~~~dg~v~iwd~~~~~~~----~~~~~~~~v~~~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAI----QIAQHDAPVKTIHWIKAPNYS--CVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EETTSEEEEEETTTTEEE----EEEECSSCEEEEEEEECSSCE--EEEEEETTSEEEEECSSCSS
T ss_pred EcCCCcEEEEEcCCCCce----eeccccCceEEEEEEeCCCCC--EEEEccCCCcEEEEECCCCc
Confidence 567899999999876533 25568899999999 88888 89999999999999998764
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.28 E-value=5.8e-11 Score=60.69 Aligned_cols=59 Identities=15% Similarity=0.300 Sum_probs=49.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+..... ....+.+|...|.+++|+|++. .+++++.|+.|++||+++++
T Consensus 192 ~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 192 GSRSGAIHHHDVRIANH--QIGTLQGHSSEVCGLAWRSDGL--QLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp EETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTCSS
T ss_pred EcCCCCEEEEecccCcc--eeeEEcCCCCCeeEEEEcCCCC--EEEEEeCCCeEEEccCCCCC
Confidence 56789999999974321 2235778999999999999998 99999999999999998753
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.28 E-value=4e-11 Score=61.90 Aligned_cols=61 Identities=23% Similarity=0.368 Sum_probs=48.8
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++||+...........+..|...+.+++|+|.+.. ++++++.|+.|++||+++.
T Consensus 250 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~-~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 250 VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF-ILATGSADKTVALWDLRNL 310 (430)
T ss_dssp EETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTT-EEEEEETTSEEEEEETTCT
T ss_pred EeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCC-EEEEEeCCCeEEEEeCCCC
Confidence 467899999999865322233356789999999999998874 6889999999999999863
No 80
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.28 E-value=5.2e-11 Score=58.93 Aligned_cols=58 Identities=24% Similarity=0.408 Sum_probs=49.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+..|...+.+++|+|++. .+++++.|+.+++||+++++
T Consensus 159 ~~~dg~v~~~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 159 CCSDGNIAVWDLHNQTLVR---QFQGHTDGASCIDISNDGT--KLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp EETTSCEEEEETTTTEEEE---EECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTE
T ss_pred EeCCCcEEEEeCCCCceee---eeecccCceEEEEECCCCC--EEEEEecCCcEEEEECCCCc
Confidence 5678999999998764333 5778899999999999998 89999999999999998763
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.28 E-value=8.5e-12 Score=66.33 Aligned_cols=56 Identities=13% Similarity=0.166 Sum_probs=47.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
++.|+.|++||+.++.... .+.+|.+.|.+++|+|+++ .+++++.|++|++||+..
T Consensus 373 ~~~d~tv~lwd~~~~~~~~---~l~gH~~~V~sva~Sp~g~--~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 373 SDGASSLRAVPSRAAFAVH---PLVSRETTITAIGVSRLHP--MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp ECSSSEEEEEETTCTTCCE---EEEECSSCEEEEECCSSCC--BCEEEETTTEEECCBSCS
T ss_pred eCCCCcEEEEECcccccce---eeecCCCceEEEEeCCCCC--eEEEEECCCEEEEEechH
Confidence 4568899999998754333 4678999999999999999 899999999999999754
No 82
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.27 E-value=4.5e-11 Score=60.51 Aligned_cols=58 Identities=17% Similarity=0.388 Sum_probs=48.4
Q ss_pred cccc---CeEEEEECCCCceEeeeEEeec-------------ccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSR---HIVQIYPCNGGDEVRQHLEIDA-------------HVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~---~~i~i~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.| +.|++||+.++.... .+.+ |...|.+++|+|++. ++++++.|+.|++||+++++
T Consensus 251 ~~~d~~~g~i~i~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 251 AHDSNSFGCITLYETEFGERIG---SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE--TLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp EEEETTEEEEEEEETTTCCEEE---EECBC--------CCBSBSSCEEEEEECSSSS--EEEEEETTSEEEEEETTTTE
T ss_pred EecCCCCceEEEEECCCCcccc---eeccCcccccccccccccCCcEEEEEECCCCC--EEEEEeCCCeEEEEEcCCCc
Confidence 4556 899999998765333 5666 889999999999999 99999999999999998763
No 83
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.27 E-value=2.5e-11 Score=61.46 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=46.9
Q ss_pred ccccCeEEEEECCCCce-EeeeEEeecccccEeEEEecC-CCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDE-VRQHLEIDAHVGGVNDIAFSH-PNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.+... ......+ +|...+.+++|+| ++. ++++++.|+.+++||+++++
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~--~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST--KLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC--EEEEEESSSEEEEEETTBTT
T ss_pred EeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC--EEEEEcCCCcEEEEECCCCc
Confidence 56789999999976221 1111123 6889999999999 888 89999999999999998753
No 84
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.27 E-value=4.9e-11 Score=60.69 Aligned_cols=56 Identities=9% Similarity=0.240 Sum_probs=44.8
Q ss_pred eEEEEECCCCce-EeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 7 IVQIYPCNGGDE-VRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 7 ~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.+.+|++..... ......+.+|...|.+++|+|++. +|++++.|++|++||+++++
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~--~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE--LAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC--EEEEEETTSCEEEEETTTTE
T ss_pred EEeecccccceecceeeeeecCCCCCeEeEEECCCCC--ceEEEcCCCEEEEEECCCCc
Confidence 567788765432 223345778899999999999999 99999999999999998764
No 85
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.27 E-value=4.8e-12 Score=65.82 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=46.8
Q ss_pred ccccCeEEEEECCCC--------ceEeeeEEeecccccEeEEEecCC-CCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGG--------DEVRQHLEIDAHVGGVNDIAFSHP-NKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++||+.+. ........+.+|...|.+++|+|. +. ++++++.|++|++||++++
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~--~las~s~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPS--MVAVCLADGSIAVLQVTET 182 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTT--EEEEEETTSCEEEEEESSS
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCC--EEEEEECCCeEEEEEcCCC
Confidence 456899999997542 111223356678999999999998 56 8999999999999999865
No 86
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.27 E-value=1.5e-11 Score=62.01 Aligned_cols=58 Identities=7% Similarity=0.064 Sum_probs=44.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeec-ccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDA-HVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
++.|+.|++||+..+........+.. |...|.+++|+|++. ++++++.|+.+++||+.
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 118 GSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV--LLAAGCADRKAYVLSAY 176 (377)
T ss_dssp EESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS--EEEEEESSSCEEEEEEC
T ss_pred EecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC--EEEEEeCCCEEEEEEEE
Confidence 56789999999987543222335666 899999999999999 99999999999999985
No 87
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.27 E-value=2.2e-11 Score=63.36 Aligned_cols=55 Identities=11% Similarity=0.091 Sum_probs=46.5
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
++.|+.|++||+.++... ....+|...+.+++|+|++. ++++++.|+.|++||.+
T Consensus 168 ~s~Dg~v~iwD~~~~~~~---~~~~~~~~~v~~v~wspdg~--~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKV---CATLPSTVAVTSVCWSPKGK--QLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EETTSCEEEEEESSSEEE---EEEECGGGCEEEEEECTTSS--CEEEEETTSCEEEECTT
T ss_pred EECCCeEEEEEcCCCcce---eeccCCCCceeEEEEcCCCC--EEEEEcCCCcEEEEccC
Confidence 577999999999876322 23456888999999999999 89999999999999987
No 88
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.26 E-value=8.2e-11 Score=57.79 Aligned_cols=57 Identities=23% Similarity=0.557 Sum_probs=47.6
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+.+|...+.+++|+|++. +++++.|+.|++||+++++
T Consensus 201 ~~~dg~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~---l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGDVLR---TYEGHESFVYCIKLLPNGD---IVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp EETTSEEEEEETTTCCEEE---EEECCSSCEEEEEECTTSC---EEEEETTSEEEEECTTTCC
T ss_pred ccCCCeEEEEECCchhhhh---hhhcCCceEEEEEEecCCC---EEEEecCCEEEEEECCCCc
Confidence 5678999999998765333 6778999999999999885 6688899999999998764
No 89
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.26 E-value=2.4e-11 Score=60.90 Aligned_cols=59 Identities=27% Similarity=0.516 Sum_probs=49.5
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++|++.++. ......+.+|...|.+++|+|++. ++++++.|+.+++||+.++
T Consensus 26 ~~~d~~v~i~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 26 CPNNHEVHIYEKSGNK-WVQVHELKEHNGQVTGVDWAPDSN--RIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp ECSSSEEEEEEEETTE-EEEEEEEECCSSCEEEEEEETTTT--EEEEEETTSCEEEEEEETT
T ss_pred EeCCCEEEEEeCCCCc-EEeeeeecCCCCcccEEEEeCCCC--EEEEEcCCCeEEEEECCCC
Confidence 4578999999997753 223446788999999999999999 9999999999999998765
No 90
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.26 E-value=1.1e-10 Score=58.28 Aligned_cols=59 Identities=22% Similarity=0.223 Sum_probs=48.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.+... ....+..|...+.+++|+|++. .+++++.|+.+++||+++++
T Consensus 193 ~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 193 GHKDGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPDLT--YFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EETTSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCC
T ss_pred EcCCCEEEEEECCCCcE--eEEEEecCCCceeEEEECCCCC--EEEEecCCceEEEEECCCCc
Confidence 56789999999987322 2235778899999999999999 89999999999999998764
No 91
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.26 E-value=4.2e-11 Score=65.08 Aligned_cols=58 Identities=24% Similarity=0.306 Sum_probs=50.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||..++.... .+.+|...|.+++|+|++. .+++++.|+.|++|++.+++
T Consensus 31 ~~~~g~v~iwd~~~~~~~~---~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 31 TLYSGRVEIWNYETQVEVR---SIQVTETPVRAGKFIARKN--WIIVGSDDFRIRVFNYNTGE 88 (814)
T ss_dssp EETTSEEEEEETTTTEEEE---EEECCSSCEEEEEEEGGGT--EEEEEETTSEEEEEETTTCC
T ss_pred EeCCCEEEEEECCCCceEE---EEecCCCcEEEEEEeCCCC--EEEEEeCCCeEEEEECCCCc
Confidence 4668999999998765333 5778999999999999999 99999999999999998764
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.25 E-value=4.7e-11 Score=61.83 Aligned_cols=58 Identities=19% Similarity=0.185 Sum_probs=48.2
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... ..+.+|...|.+++|+ ++. ++++++.|+.|++||+.+++
T Consensus 216 ~~~d~~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~s-d~~--~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 216 SDRDEHIKISHYPQCFIVD--KWLFGHKHFVSSICCG-KDY--LLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EETTSCEEEEEESCTTCEE--EECCCCSSCEEEEEEC-STT--EEEEEESSSEEEEEETTTCC
T ss_pred EcCCCcEEEEECCCCceee--eeecCCCCceEEEEEC-CCC--EEEEEeCCCeEEEEECCCCc
Confidence 5678999999998765332 1255799999999999 888 99999999999999998774
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.25 E-value=8.9e-11 Score=57.65 Aligned_cols=57 Identities=11% Similarity=0.085 Sum_probs=48.2
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++||+.+..... .+..|...+.+++|+|++. .+++++.|+.+++|++...
T Consensus 35 ~~~dg~v~vw~~~~~~~~~---~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 35 VSRDGTVRLWSKDDQWLGT---VVYTGQGFLNSVCYDSEKE--LLLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp EETTSEEEEEEESSSEEEE---EEEECSSCEEEEEEETTTT--EEEEEETTSCEEEEETTCC
T ss_pred EEcCCcEEEEECCCCEEEE---EeecCCccEEEEEECCCCC--EEEEecCCCeEEEEEeeec
Confidence 5779999999997654333 5667889999999999999 9999999999999998654
No 94
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.25 E-value=7.7e-11 Score=59.08 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=49.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCC--CCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHP--NKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++||+.++. ......+..|...+.+++|+|+ +. .+++++.|+.+++||++++
T Consensus 75 ~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~--~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 75 CSYDGKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGP--LLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCS--EEEEEETTSEEEEEECCTT
T ss_pred eccCCEEEEEEcCCCc-eeEeeeecCCCcceEEEEeCCCCCCC--EEEEecCCCcEEEEecCCC
Confidence 5678999999998764 2234456778999999999999 78 8999999999999999875
No 95
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.25 E-value=5.6e-11 Score=62.72 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=48.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeec-ccccEeEEEecC----------CCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDA-HVGGVNDIAFSH----------PNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~----------~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++|++.++.... .+.+ |...|.+++|+| ++. ++++++.|+.|++|++.++
T Consensus 506 ~~~dg~i~iw~~~~~~~~~---~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~--~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 506 GDVMGKILLYDLQSREVKT---SRWAFRTSKINAISWKPAEKGANEEEIEED--LVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp EETTSCEEEEETTTTEEEE---CCSCCCSSCEEEEEECCCC------CCSCC--EEEEEETTSCEEEEESSCT
T ss_pred cCCCCeEEEeeCCCCccee---EeecCCCCceeEEEEcCccccccccccCCC--EEEEEcCCCcEEEEECCCC
Confidence 5678999999998765433 4566 899999999999 888 9999999999999999875
No 96
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.24 E-value=6.2e-11 Score=60.75 Aligned_cols=59 Identities=8% Similarity=0.134 Sum_probs=46.3
Q ss_pred ccCeEEEEECCCCceEeeeE-----EeecccccEeEEEecCCC-CcEEEEEecCCCcEEEEECCCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHL-----EIDAHVGGVNDIAFSHPN-KQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~-~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.|+.|++||+.......... .+.+|...|.+++|+|++ . ++++++.|+.|++||+++++
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~--~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 196 DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN--TFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT--EEEEEETTSCEEEEETTTCS
T ss_pred CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc--EEEEEeCCCeEEEEECcCCc
Confidence 68999999997422111110 245788999999999998 7 99999999999999998764
No 97
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.23 E-value=1e-10 Score=65.24 Aligned_cols=57 Identities=18% Similarity=0.272 Sum_probs=46.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeec------------------ccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDA------------------HVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.+ +||+.++.... .+.. |...|.+++|+|++. ++++++.|+.|++||++++
T Consensus 170 g~~dg~v-lWd~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~--~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 170 SYEYVTL-TYSLVENEIKQ---SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL--HIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp ECSSCEE-EEETTTTEEEE---EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS--EEEEEETTCCEEEEETTTC
T ss_pred EeCCCcE-EEECCCCceEE---EEecccCCcCCCcccccccccccCCCeEEEEEcCCCC--EEEEEECCCeEEEEECCCC
Confidence 5678999 99998764332 3333 356799999999999 9999999999999999876
Q ss_pred C
Q 039404 64 V 64 (65)
Q Consensus 64 ~ 64 (65)
+
T Consensus 244 ~ 244 (902)
T 2oaj_A 244 H 244 (902)
T ss_dssp C
T ss_pred c
Confidence 4
No 98
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.23 E-value=1.1e-10 Score=60.23 Aligned_cols=56 Identities=25% Similarity=0.482 Sum_probs=45.7
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++.... .+.+|...|.+++| ++. .+++++.|+.|++||+.+++
T Consensus 149 g~~dg~i~iwd~~~~~~~~---~~~~h~~~v~~l~~--~~~--~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 149 GLRDNTIKIWDKNTLECKR---ILTGHTGSVLCLQY--DER--VIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp EESSSCEEEEESSSCCEEE---EECCCSSCEEEEEC--CSS--EEEEEETTSCEEEEESSSCC
T ss_pred EeCCCeEEEEeCCCCeEEE---EEcCCCCcEEEEEE--CCC--EEEEEcCCCeEEEEECCCCc
Confidence 5678999999988765333 57789999999988 566 89999999999999988764
No 99
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.22 E-value=1.5e-10 Score=58.66 Aligned_cols=55 Identities=18% Similarity=0.338 Sum_probs=43.7
Q ss_pred ccccCeEEEEECCCCceEeeeEEeec--ccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDA--HVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
++.|+.|++||+.++.... .+.+ |...+..++|+|++. ++++++ |+.|++|++++
T Consensus 326 ~s~d~~i~iwd~~~~~~~~---~l~~~~~~~~~~~~~~s~~g~--~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 326 LNDKRTIDIYDANSGGLVH---QLRDPNAAGIISLNKFSPTGD--VLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTCCCCEEEEETTTCCEEE---EECBTTBCSCCCEEEECTTSS--EEEEEE-TTEEEEEECC-
T ss_pred cCCCCeEEEEecCCCceee---eecCCCCCceEEEEEEecCcc--EEEEec-CCcEEEEecCC
Confidence 5679999999998765433 4554 456677889999999 899986 99999999875
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.21 E-value=1.1e-10 Score=63.41 Aligned_cols=57 Identities=26% Similarity=0.524 Sum_probs=49.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++|++.++.... .+.+|...|.+++|+|++. .+++++.|+.+++|++.++
T Consensus 73 ~~~dg~i~vw~~~~~~~~~---~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 73 GSDDFRIRVFNYNTGEKVV---DFEAHPDYIRSIAVHPTKP--YVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp EETTSEEEEEETTTCCEEE---EEECCSSCEEEEEECSSSS--EEEEEETTSEEEEEEGGGT
T ss_pred EeCCCeEEEEECCCCcEEE---EEecCCCCEEEEEEeCCCC--EEEEEcCCCEEEEEECCCC
Confidence 5678999999998765443 5778999999999999999 8999999999999998764
No 101
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.21 E-value=1.5e-10 Score=57.32 Aligned_cols=58 Identities=12% Similarity=0.233 Sum_probs=46.4
Q ss_pred cCeEEEEECCCCceEeeeEEee--cccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEID--AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|++|++.++........+. .|...+.+++|+|++. .+++++.|+.+++||+.+++
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC--TLIVGGEASTLSIWDLAAPT 130 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS--EEEEEESSSEEEEEECCCC-
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC--EEEEEcCCCcEEEEECCCCC
Confidence 8999999997654333222333 6888999999999999 89999999999999998754
No 102
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.21 E-value=1.2e-10 Score=57.98 Aligned_cols=61 Identities=23% Similarity=0.335 Sum_probs=46.9
Q ss_pred ccccCeEEEEECCCC--c-eEeeeEEeecccc---------cEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGG--D-EVRQHLEIDAHVG---------GVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~--~-~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.+++|++... . .......+..|.. .|.+++|+|++. ++++++.|+.|++||+.+++
T Consensus 212 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 212 SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK--FLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp EETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC--CEEEEETTSCEEEEETTTTE
T ss_pred EecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC--EEEEecCCceEEEEcCccHh
Confidence 567899999998764 0 0112234566644 899999999999 89999999999999998764
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.21 E-value=1.6e-10 Score=58.41 Aligned_cols=58 Identities=17% Similarity=0.288 Sum_probs=48.2
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.++.|++||+.++.... .+.+|...|.+++|+|++.. ++++++.|+.+++||++++
T Consensus 162 ~~~~~~v~~~d~~~~~~~~---~~~~~~~~v~~~~~~~~~~~-ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 162 GTRGPKVQLCDLKSGSCSH---ILQGHRQEILAVSWSPRYDY-ILATASADSRVKLWDVRRA 219 (408)
T ss_dssp EESSSSEEEEESSSSCCCE---EECCCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTCS
T ss_pred EcCCCeEEEEeCCCcceee---eecCCCCcEEEEEECCCCCc-EEEEEcCCCcEEEEECCCC
Confidence 4678899999998754333 57789999999999999884 5889999999999999764
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.21 E-value=7e-11 Score=64.65 Aligned_cols=59 Identities=22% Similarity=0.512 Sum_probs=49.2
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCC--CCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHP--NKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++|++..+. ......+.+|.+.|.+++|+|+ +. .+++++.|+.|++||+.++
T Consensus 27 g~~dg~I~vwd~~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~~--~l~s~s~Dg~I~vwd~~~~ 87 (753)
T 3jro_A 27 CSSDKTIKIFEVEGET-HKLIDTLTGHEGPVWRVDWAHPKFGT--ILASCSYDGKVLIWKEENG 87 (753)
T ss_dssp EETTTEEEEEEEETTE-EEEEEEECCCSSCEEEEEECCTTSCS--EEEEEETTSCEEEEEEETT
T ss_pred EECCCcEEEEecCCCC-CccceeccCCcCceEEEEecCCCCCC--EEEEEeCCCeEEEEECCCC
Confidence 5679999999987432 3344567889999999999987 77 9999999999999998765
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.20 E-value=2.1e-10 Score=60.60 Aligned_cols=58 Identities=26% Similarity=0.297 Sum_probs=48.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccc---cEeEEEecCC-CCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVG---GVNDIAFSHP-NKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||..+.... ..+.+|.. .|.+++|+|+ +. .+++++.|+.+++||+++++
T Consensus 179 ~~~d~~v~vwd~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 179 VGDDGSVVFYQGPPFKFS---ASDRTHHKQGSFVRDVEFSPDSGE--FVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp EETTTEEEEEETTTBEEE---EEECSSSCTTCCEEEEEECSTTCC--EEEEEETTCCEEEEETTTCC
T ss_pred EeCCCcEEEEeCCCccee---eeecccCCCCceEEEEEECCCCCC--EEEEEeCCCeEEEEECCCCC
Confidence 567899999998765433 35778888 8999999999 88 89999999999999998764
No 106
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.19 E-value=1e-10 Score=66.07 Aligned_cols=57 Identities=19% Similarity=0.454 Sum_probs=49.6
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++||+.++.... .+.+|...|.+++|+|++. .+++++.|+.+++||++++
T Consensus 719 g~~d~~v~vwd~~~~~~~~---~~~~h~~~v~~~~~sp~~~--~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 719 GSNDFFLKLWDLNQKECRN---TMFGHTNSVNHCRFSPDDE--LLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp EETTSCEEEEETTSSSEEE---EECCCSSCEEEEEECSSTT--EEEEEESSSEEEEEEGGGT
T ss_pred EeCCCeEEEEECCCcchhh---eecCCCCCEEEEEEecCCC--EEEEEECCCeEEEEeCCCC
Confidence 5678999999998765443 5778999999999999999 9999999999999998765
No 107
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.2e-10 Score=59.01 Aligned_cols=57 Identities=9% Similarity=-0.053 Sum_probs=48.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++||+.++.... .+..|...+.+++|+|++. ++++++.|+.|++|++.++
T Consensus 306 ~~~d~~i~i~d~~~~~~~~---~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 306 CSMDGSVRLWSLKQNTLLA---LSIVDGVPIFAGRISQDGQ--KYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp EETTSEEEEEETTTTEEEE---EEECTTCCEEEEEECTTSS--EEEEEETTSCEEEEECHHH
T ss_pred EeCCCcEEEEECCCCcEeE---ecccCCccEEEEEEcCCCC--EEEEEECCCeEEEEECCCC
Confidence 5678999999998765333 5677888999999999999 9999999999999998654
No 108
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.17 E-value=2.3e-10 Score=57.35 Aligned_cols=61 Identities=18% Similarity=0.148 Sum_probs=47.2
Q ss_pred ccccCeEEEEECCCC---------------ceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGG---------------DEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.+++||+... ........+.+|...+.+++|+|++. ++++++.|+.+++||+++++
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS--RVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS--EEEEEETTTEEEEEEGGGTT
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC--EEEEEeCCCEEEEEECCCCc
Confidence 567899999996411 00112335668889999999999999 99999999999999997653
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.17 E-value=2.5e-10 Score=58.89 Aligned_cols=55 Identities=25% Similarity=0.556 Sum_probs=42.6
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++||+.++.... .+.+|...|.+++|+ +. .+++++.|+.|++||+.++
T Consensus 135 g~~dg~i~vwd~~~~~~~~---~~~~h~~~v~~~~~~--~~--~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 135 GSDDNTLKVWSAVTGKCLR---TLVGHTGGVWSSQMR--DN--IIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp EETTSCEEEEETTTCCEEE---ECCCCSSCEEEEEEE--TT--EEEEEETTSCEEEEETTTT
T ss_pred EECCCcEEEEECCCCcEEE---EEcCCCCCEEEEEec--CC--EEEEEeCCCeEEEEECCcC
Confidence 5678888999987765333 567888888888886 45 7888888888988888765
No 110
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.16 E-value=9.9e-11 Score=58.35 Aligned_cols=59 Identities=19% Similarity=0.259 Sum_probs=46.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEE------ecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIA------FSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~------~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++. .....+.+|...|.+++ |+|++. .+++++.|+.+++||+++++
T Consensus 86 ~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~~--~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPE--MPVYSVKGHKEIINAIDGIGGLGIGEGAP--EIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp EETTSCEEEECTTSCS--SCSEEECCCSSCEEEEEEESGGGCC-CCC--EEEEEETTSCEEEECTTSCS
T ss_pred ecCCCeEEEEeCCCCC--ccEEEEEecccceEEEeeccccccCCCcc--EEEEEeCCCeEEEEeCCCCC
Confidence 5678999999998754 12235778999999995 467888 89999999999999998764
No 111
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.16 E-value=2.9e-10 Score=62.25 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=49.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCC--CCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHP--NKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++||+.++. ......+.+|...|.+++|+|+ +. .+++++.|+.|++||++++
T Consensus 73 ~s~Dg~I~vwd~~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~--~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 73 CSYDGKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGP--LLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCS--EEEEEETTSEEEEEECCSS
T ss_pred EeCCCeEEEEECCCCc-ccccccccCCCCCeEEEEECCCCCCC--EEEEEeCCCcEEEEEeecC
Confidence 5779999999998753 2334467789999999999999 88 8999999999999999876
No 112
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.16 E-value=4.3e-10 Score=58.09 Aligned_cols=61 Identities=20% Similarity=0.371 Sum_probs=48.2
Q ss_pred ccccCeEEEEECCCCc----eEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGD----EVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
|+.|+.|++|++.... .......+.+|...|.+++|+|.+.. ++++++.|+.|++||++++
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHES-LFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTT-EEEEEETTSEEEEEETTCS
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCC-EEEEEeCCCeEEEEECCCC
Confidence 5678999999997632 22223456789999999999994443 8999999999999999875
No 113
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.15 E-value=4.7e-10 Score=56.88 Aligned_cols=57 Identities=9% Similarity=0.274 Sum_probs=47.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++|+.. +... ..+..|...|.+++|+|++. .+++++.|+.+++||+.+++
T Consensus 126 ~~~dg~i~i~~~~-~~~~---~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 126 GVENGELRLWNKT-GALL---NVLNFHRAPIVSVKWNKDGT--HIISMDVENVTILWNVISGT 182 (425)
T ss_dssp EETTSCEEEEETT-SCEE---EEECCCCSCEEEEEECTTSS--EEEEEETTCCEEEEETTTTE
T ss_pred EeCCCeEEEEeCC-CCee---eeccCCCccEEEEEECCCCC--EEEEEecCCeEEEEECCCCc
Confidence 5678999999943 3322 25778999999999999999 89999999999999998753
No 114
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.15 E-value=8.8e-11 Score=59.67 Aligned_cols=61 Identities=16% Similarity=0.412 Sum_probs=48.6
Q ss_pred ccccCeEEEEECCCCc-eEeeeEEeecccccEeEEEecCC-CCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGD-EVRQHLEIDAHVGGVNDIAFSHP-NKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++|++.... .......+.+|...|.+++|+|+ +. ++++++.|+.|++||+.+++
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDN--VLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTT--BEEEECSSSCEEBCBTTTTS
T ss_pred EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCC--EEEEEcCCCeEEEEECCCCc
Confidence 4678999999997621 11133467789999999999998 66 89999999999999998764
No 115
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.15 E-value=4.1e-10 Score=62.91 Aligned_cols=56 Identities=9% Similarity=0.144 Sum_probs=47.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.|++||+.++.... .+. |...|.+++|+|++. ++++++.|+.|++||++++
T Consensus 75 ~s~D~~v~lWd~~~~~~~~---~~~-~~~~V~~v~~sp~g~--~l~sgs~dg~V~lwd~~~~ 130 (902)
T 2oaj_A 75 INAKDTVYVLSLYSQKVLT---TVF-VPGKITSIDTDASLD--WMLIGLQNGSMIVYDIDRD 130 (902)
T ss_dssp EETTCEEEEEETTTCSEEE---EEE-CSSCEEEEECCTTCS--EEEEEETTSCEEEEETTTT
T ss_pred EECcCeEEEEECCCCcEEE---EEc-CCCCEEEEEECCCCC--EEEEEcCCCcEEEEECCCC
Confidence 5679999999998765443 343 567899999999999 9999999999999999765
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.14 E-value=1.7e-10 Score=59.24 Aligned_cols=58 Identities=10% Similarity=0.078 Sum_probs=41.4
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecc---cccEeEEEecCCCCcEEE------------EEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAH---VGGVNDIAFSHPNKQLYV------------ITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l------------~s~~~~~~i~~w~~~~~~ 64 (65)
++.|++|++||+.+++... .+.+| ...+.+++|+|++. ++ ++++.|+++++||..+++
T Consensus 199 gS~D~TIkIWDl~TGk~l~---tL~g~~~~v~~v~~vafSpdG~--~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 199 TTIMNNIVIWNLKTGQLLK---KMHIDDSYQASVCHKAYSEMGL--LFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp EETTSEEEEEETTTCCEEE---EEECCC---CCCEEEEEEETTE--EEEEEC------------CCEEEEEEETTTTE
T ss_pred ecCCCcEEEEECCCCcEEE---EEcCCCcceeeeEEEEECCCCC--EEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 5789999999999876544 45543 23567789999887 54 567889999999998763
No 117
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.13 E-value=5e-10 Score=57.42 Aligned_cols=58 Identities=21% Similarity=0.399 Sum_probs=44.6
Q ss_pred ccccCeEEEEECCCCce-EeeeEEeecccc------------cEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 2 AYSRHIVQIYPCNGGDE-VRQHLEIDAHVG------------GVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~-~~~~~~~~~~~~------------~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
|+.|+.|++||+.++.. ......+.+|.. .|.+++|+|++. ++++++. +.|++||+++
T Consensus 245 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 245 SSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR--YMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp EETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS--EEEEEES-SEEEEEETTC
T ss_pred EeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC--EEEEeeC-CeEEEEeCCC
Confidence 56789999999987542 111234666654 899999999999 8999888 9999999986
No 118
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.13 E-value=9.1e-11 Score=60.23 Aligned_cols=58 Identities=12% Similarity=0.268 Sum_probs=45.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEee-cccccEeEEEecC----CCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEID-AHVGGVNDIAFSH----PNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+..+.... .+. .|...|.+++|+| ++. ++++++.|+.|++||+++++
T Consensus 232 ~~~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~s~~~~--~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 232 GTTRGIIDIWDIRFNVLIR---SWSFGDHAPITHVEVCQFYGKNSV--IVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp EETTSCEEEEETTTTEEEE---EEBCTTCEEEEEEEECTTTCTTEE--EEEEESTTEEEEEEETTTTE
T ss_pred EcCCCeEEEEEcCCccEEE---EEecCCCCceEEEEeccccCCCcc--EEEEEcCCCcEEEEEcCCCc
Confidence 6778999999998754332 343 6677899996654 566 89999999999999998763
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.8e-10 Score=61.47 Aligned_cols=54 Identities=9% Similarity=0.209 Sum_probs=43.7
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccc-----cEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVG-----GVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|+.+++|+.+. ... .+. |.. .+.+++|+|+++ +|++++.|+.|++|++.++
T Consensus 103 ~s~dg~V~iwd~~~--~l~---~l~-~~~~~~~~sv~svafSPDG~--~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 103 LSNNGNVSVFKDNK--MLT---NLD-SKGNLSSRTYHCFEWNPIES--SIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp EETTSCEEEEETTE--EEE---ECC-CSSCSTTTCEEEEEECSSSS--CEEEEETTSEEEEEECCCC
T ss_pred EeCCCcEEEEeCCc--eee---ecc-CCCccccccEEEEEEcCCCC--EEEEEcCCCEEEEEECCCC
Confidence 57899999999643 222 344 443 599999999999 9999999999999999876
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.11 E-value=7.4e-10 Score=57.14 Aligned_cols=59 Identities=20% Similarity=0.459 Sum_probs=47.5
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|+.|+.|++||+.++........+.+|...|.+++| ++. .+++++.|+.+++||+++++
T Consensus 229 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~--~l~s~~~dg~i~vwd~~~~~ 287 (435)
T 1p22_A 229 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK--YIVSASGDRTIKVWNTSTCE 287 (435)
T ss_dssp EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT--EEEEEETTSEEEEEETTTCC
T ss_pred eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC--EEEEEeCCCeEEEEECCcCc
Confidence 567899999998775544333467789999999999 566 89999999999999998764
No 121
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.11 E-value=5.3e-10 Score=55.61 Aligned_cols=61 Identities=8% Similarity=-0.106 Sum_probs=47.2
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEEC-CCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDA-TNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~-~~~ 63 (65)
++.|+.|++|++..+........+.+|...|.+++|+|++.. .+++++.|+.|++|++ .++
T Consensus 29 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 29 TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDL-QIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSE-EEEEEETTSCEEEECSSSSS
T ss_pred EcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCc-EEEEEcCCCeEEEEEeccCC
Confidence 567899999998765422222345578999999999998762 3778889999999999 765
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1.8e-10 Score=59.63 Aligned_cols=61 Identities=21% Similarity=0.183 Sum_probs=48.3
Q ss_pred ccccCeEEEEECCCCceEe-eeEEeecccccEeEEEecCC---CCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVR-QHLEIDAHVGGVNDIAFSHP---NKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.++.+.+|++.+..... ....+.+|...|.+++|+|+ +. ++++++.|+.|++||+.++.
T Consensus 167 ~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~--~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 167 ADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ--FIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp EETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE--EEEEEETTSCEEEEEESCTT
T ss_pred EeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc--EEEEEcCCCcEEEEECCCCc
Confidence 4567889999987654222 22246788999999999999 87 89999999999999998764
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.05 E-value=1.7e-09 Score=55.87 Aligned_cols=60 Identities=17% Similarity=0.168 Sum_probs=47.8
Q ss_pred ccccCeEEEEECCCCceEeeeEEe--ecccccEeEEEecCCCCcEEEEEecCCCc----EEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEI--DAHVGGVNDIAFSHPNKQLYVITCGDDKT----IKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~~~~~~----i~~w~~~~~ 63 (65)
++.|+.|++||+.++......... ..|.+.|.+++|+|++. .+++++.|+. +.+||+...
T Consensus 378 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 378 SSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL--VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE--EEEEECSSSSSCCEEEEEECCCC
T ss_pred EeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEE--EEEEcccCCCCccEEEEEECCCC
Confidence 567999999999887644422111 36778899999999988 8999999997 999999754
No 124
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.97 E-value=2.5e-09 Score=57.94 Aligned_cols=60 Identities=10% Similarity=0.087 Sum_probs=44.8
Q ss_pred CccccCeEEEEECCCCce--E--eeeEEe----ecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 1 VAYSRHIVQIYPCNGGDE--V--RQHLEI----DAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 1 ~~~~~~~i~i~~~~~~~~--~--~~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
+|+.|+.|++|++.++.. . -....+ .+|.+.|.+++|+|++ +++++.|+++++|++..+.
T Consensus 146 sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg----Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 146 VGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV----LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE----EEEEETTCCEEEECCCSSS
T ss_pred EEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc----EEEEeCCCeEEEEECCCCc
Confidence 367899999999987631 0 112244 5677899999999976 5567789999999987653
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.93 E-value=1.3e-08 Score=51.56 Aligned_cols=57 Identities=7% Similarity=0.077 Sum_probs=44.5
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEE-EEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYV-ITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+..|. .+.+++|+|++. .+ ++++.++.|++||+.+++
T Consensus 8 ~~~d~~v~v~d~~~~~~~~---~~~~~~-~~~~~~~s~dg~--~l~~~~~~d~~i~v~d~~~~~ 65 (391)
T 1l0q_A 8 NSESDNISVIDVTSNKVTA---TIPVGS-NPMGAVISPDGT--KVYVANAHSNDVSIIDTATNN 65 (391)
T ss_dssp ETTTTEEEEEETTTTEEEE---EEECSS-SEEEEEECTTSS--EEEEEEGGGTEEEEEETTTTE
T ss_pred cCCCCEEEEEECCCCeEEE---EeecCC-CcceEEECCCCC--EEEEECCCCCeEEEEECCCCe
Confidence 4678999999998765433 455554 479999999998 55 677789999999998764
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.89 E-value=3.4e-08 Score=50.64 Aligned_cols=58 Identities=10% Similarity=0.033 Sum_probs=45.7
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEE-EEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYV-ITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|++||+.++.... .+..|...+.+++|+|++. .+ ++++.++.|.+||+++++
T Consensus 187 ~~~d~~v~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 187 QMQANAVHVFDLKTLAYKA---TVDLTGKWSKILLYDPIRD--LVYCSNWISEDISVIDRKTKL 245 (433)
T ss_dssp EGGGTEEEEEETTTCCEEE---EEECSSSSEEEEEEETTTT--EEEEEETTTTEEEEEETTTTE
T ss_pred ECCCCEEEEEECCCceEEE---EEcCCCCCeeEEEEcCCCC--EEEEEecCCCcEEEEECCCCc
Confidence 4567899999998765333 4667888899999999998 55 556689999999998763
No 127
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.81 E-value=8.2e-08 Score=46.57 Aligned_cols=55 Identities=9% Similarity=0.036 Sum_probs=43.6
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC-CC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN-GV 64 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~-~~ 64 (65)
+.++.|++||+.++... .+..|...+.+++|+|++. .+++++ ++.+.+||+.+ ++
T Consensus 19 ~~~~~i~~~d~~~~~~~----~~~~~~~~v~~~~~spdg~--~l~~~~-~~~i~~~d~~~~~~ 74 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMR----VVWQTPELFEAPNWSPDGK--YLLLNS-EGLLYRLSLAGDPS 74 (297)
T ss_dssp CCCEEEEEEETTTTEEE----EEEEESSCCEEEEECTTSS--EEEEEE-TTEEEEEESSSCCS
T ss_pred CcceeEEEEeCCCCcee----eeccCCcceEeeEECCCCC--EEEEEc-CCeEEEEeCCCCCC
Confidence 45788999999876432 3445778899999999999 787765 78999999987 53
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.79 E-value=1.1e-07 Score=48.15 Aligned_cols=56 Identities=21% Similarity=0.201 Sum_probs=42.4
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEE-EEecCCCcEEEEECCCCC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYV-ITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~~~~i~~w~~~~~~ 64 (65)
+.|+.|++||+.++.... .+..+ ..+.+++|+|++. .+ +++..++.|.+||+.+++
T Consensus 51 ~~d~~i~v~d~~~~~~~~---~~~~~-~~v~~~~~spdg~--~l~~~~~~~~~v~v~d~~~~~ 107 (391)
T 1l0q_A 51 AHSNDVSIIDTATNNVIA---TVPAG-SSPQGVAVSPDGK--QVYVTNMASSTLSVIDTTSNT 107 (391)
T ss_dssp GGGTEEEEEETTTTEEEE---EEECS-SSEEEEEECTTSS--EEEEEETTTTEEEEEETTTTE
T ss_pred CCCCeEEEEECCCCeEEE---EEECC-CCccceEECCCCC--EEEEEECCCCEEEEEECCCCe
Confidence 468899999998765333 34433 3789999999998 55 455677999999998763
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.76 E-value=2e-08 Score=51.48 Aligned_cols=61 Identities=16% Similarity=0.232 Sum_probs=47.0
Q ss_pred ccccCeEEEEECCCCceEeeeE--EeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHL--EIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.++.|.+||+.++....... .+.+|...+.+++|++++. ++++++.|+.+++||+.+++
T Consensus 140 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 140 LLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE--LWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp BTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE--EEEEEGGGTEEEEEETTTCC
T ss_pred eCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE--EEEEECCCCEEEEEECCCce
Confidence 3456789999998765332111 2347788899999999888 89999999999999998753
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.68 E-value=3.1e-07 Score=47.60 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=42.7
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCC---cEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDK---TIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~---~i~~w~~~~~~ 64 (65)
+.|++||+.... . ..+.+|...+.+++|+|++. .+++++.++ .|++||+.+++
T Consensus 159 ~~i~i~d~~g~~-~---~~l~~~~~~v~~~~~Spdg~--~la~~s~~~~~~~i~~~d~~tg~ 214 (415)
T 2hqs_A 159 YELRVSDYDGYN-Q---FVVHRSPQPLMSPAWSPDGS--KLAYVTFESGRSALVIQTLANGA 214 (415)
T ss_dssp EEEEEEETTSCS-C---EEEEEESSCEEEEEECTTSS--EEEEEECTTSSCEEEEEETTTCC
T ss_pred ceEEEEcCCCCC-C---EEEeCCCCcceeeEEcCCCC--EEEEEEecCCCcEEEEEECCCCc
Confidence 689999997543 2 24667888999999999999 888887764 99999998764
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.58 E-value=1e-06 Score=47.35 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=43.5
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEEC--CCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDA--TNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~--~~~ 63 (65)
++.++.|.+||..++.... .+..+.. +..++|+|++. ++++++.++.|.+||+ .++
T Consensus 155 ~~~d~~V~v~D~~t~~~~~---~i~~g~~-~~~v~~spdg~--~l~v~~~d~~V~v~D~~~~t~ 212 (543)
T 1nir_A 155 LRDAGQIALVDGDSKKIVK---VIDTGYA-VHISRMSASGR--YLLVIGRDARIDMIDLWAKEP 212 (543)
T ss_dssp EGGGTEEEEEETTTCCEEE---EEECSTT-EEEEEECTTSC--EEEEEETTSEEEEEETTSSSC
T ss_pred EcCCCeEEEEECCCceEEE---EEecCcc-cceEEECCCCC--EEEEECCCCeEEEEECcCCCC
Confidence 3457899999998765443 4542222 78999999999 8999999999999999 554
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.51 E-value=2.4e-06 Score=44.35 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=40.0
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEE-EecCCC--cEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVI-TCGDDK--TIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~~~--~i~~w~~~~~~ 64 (65)
..|++||+.++... .+..+...+.+++|+|++. .++ +++.++ .|.+||+.+++
T Consensus 203 ~~i~~~d~~tg~~~----~l~~~~~~~~~~~~spdg~--~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 203 SALVIQTLANGAVR----QVASFPRHNGAPAFSPDGS--KLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp CEEEEEETTTCCEE----EEECCSSCEEEEEECTTSS--EEEEEECTTSSCEEEEEETTTCC
T ss_pred cEEEEEECCCCcEE----EeecCCCcccCEEEcCCCC--EEEEEEecCCCceEEEEECCCCC
Confidence 48999999876532 3556777899999999999 565 665554 49999987763
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.40 E-value=7.9e-06 Score=40.63 Aligned_cols=56 Identities=11% Similarity=0.036 Sum_probs=40.6
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec-CCCcEEEEECCCCC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWDATNGV 64 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~~~~~ 64 (65)
..++.|.+||..++.... .+..+.... .++|+|++. .++.++ .++.+.+||..+++
T Consensus 17 ~~~~~v~~~d~~~~~~~~---~~~~~~~~~-~~~~s~dg~--~l~~~~~~~~~i~~~d~~~~~ 73 (331)
T 3u4y_A 17 QHLRRISFFSTDTLEILN---QITLGYDFV-DTAITSDCS--NVVVTSDFCQTLVQIETQLEP 73 (331)
T ss_dssp GGGTEEEEEETTTCCEEE---EEECCCCEE-EEEECSSSC--EEEEEESTTCEEEEEECSSSS
T ss_pred cCCCeEEEEeCcccceee---eEEccCCcc-eEEEcCCCC--EEEEEeCCCCeEEEEECCCCc
Confidence 457899999998765433 233344455 999999998 555544 48899999998764
No 134
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.38 E-value=1.9e-06 Score=48.99 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=43.3
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCC----------CcEEEEECCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDD----------KTIKVWDATNG 63 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~----------~~i~~w~~~~~ 63 (65)
++.++.+++||+.++.... ...+|...+..++|+|++. .+++++.+ ..+.+||+.++
T Consensus 396 ~~~~~~v~~~d~~tg~~~~---~~~~~~~~v~~~~~SpDG~--~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 396 ANDRFEIMTVDLETGKPTV---IERSREAMITDFTISDNSR--FIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EETTSEEEEEETTTCCEEE---EEECSSSCCCCEEECTTSC--EEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred ECCCCeEEEEECCCCceEE---eccCCCCCccceEECCCCC--eEEEEecCccccccCCCCCeEEEEECCCC
Confidence 3456789999998765333 3446888889999999999 77776554 48999999765
No 135
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.37 E-value=3e-06 Score=45.30 Aligned_cols=53 Identities=13% Similarity=0.088 Sum_probs=42.2
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCC--cEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDK--TIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~--~i~~w~~~~~~ 64 (65)
..|.+||+.++... .+..+...+..++|+|+++ .++++..++ .|.+||+.+++
T Consensus 175 ~~i~~~d~~~g~~~----~l~~~~~~~~~~~~SpDG~--~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 175 VSLFTSNLSSGGLR----VFDSGEGSFSSASISPGMK--VTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEEEETTTCCCE----EECCSSCEEEEEEECTTSC--EEEEEECSSCEEEEEECTTTCC
T ss_pred eEEEEEcCCCCCce----EeecCCCccccceECCCCC--EEEEccCCCeeEEEEEcCCCCc
Confidence 56889998776432 3567777889999999999 788877788 89999988764
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.36 E-value=2.3e-06 Score=46.56 Aligned_cols=57 Identities=9% Similarity=0.039 Sum_probs=42.3
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccc---cEeEEEecCCCCcEEEEEecCC---------CcEEEEECCCCC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVG---GVNDIAFSHPNKQLYVITCGDD---------KTIKVWDATNGV 64 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~s~~~~---------~~i~~w~~~~~~ 64 (65)
+.|+.|++||..++.... .+..|.. .+..++|+|++. .+++++.+ +.+.+||+.+++
T Consensus 34 ~~dg~i~~~d~~~g~~~~---~~~~~~~~~~~v~~~~~SpDg~--~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 102 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTV---LIEGKKIESLRAIRYEISPDRE--YALFSYNVEPIYQHSYTGYYVLSKIPHGD 102 (723)
T ss_dssp CSSSCEEEBCGGGCCCEE---EECTTTTTTTTCSEEEECTTSS--EEEEEESCCCCSSSCCCSEEEEEESSSCC
T ss_pred eCCCCEEEEECCCCcEEE---EeccccccccccceEEECCCCC--EEEEEecCccceeecceeeEEEEECCCCc
Confidence 457899999998765332 3444543 488999999999 78877653 788899998764
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.35 E-value=7e-06 Score=40.63 Aligned_cols=54 Identities=9% Similarity=0.124 Sum_probs=40.5
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|.+||+.++.... .+.. ...+.+++|+|++. .+++++.++.|.+||+.+++
T Consensus 259 ~~~v~~~d~~~~~~~~---~~~~-~~~~~~~~~s~dg~--~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 259 YNVLESFDLEKNASIK---RVPL-PHSYYSVNVSTDGS--TVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp ESEEEEEETTTTEEEE---EEEC-SSCCCEEEECTTSC--EEEEESBSSEEEEEETTTCC
T ss_pred CCeEEEEECCCCcCcc---eecC-CCceeeEEECCCCC--EEEEEcCCCcEEEEECcCCc
Confidence 4678999987764332 2322 24568899999999 77778889999999998764
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.31 E-value=8.8e-06 Score=40.38 Aligned_cols=56 Identities=9% Similarity=0.131 Sum_probs=40.1
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCC-CcEEEEECC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDD-KTIKVWDAT 61 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~-~~i~~w~~~ 61 (65)
+.++.|.+|++...........+ .+...+.+++|+|++. .+++++.+ +.+.+|++.
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~--~l~~~~~~~~~v~~~~~~ 68 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKR--YLYVGVRPEFRVLAYRIA 68 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSS--EEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCC--EEEEeecCCCeEEEEEec
Confidence 56889999998532222222222 3556778999999999 77777665 899999986
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.30 E-value=4.2e-06 Score=45.00 Aligned_cols=59 Identities=12% Similarity=0.089 Sum_probs=45.5
Q ss_pred ccCeEEEEECCCCc----eEeeeEEeecccccEeEEEecCCCCcEEEEEec-------CCCcEEEEECCCCC
Q 039404 4 SRHIVQIYPCNGGD----EVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG-------DDKTIKVWDATNGV 64 (65)
Q Consensus 4 ~~~~i~i~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-------~~~~i~~w~~~~~~ 64 (65)
.|++|.+||..+.. ....+..+.+|...+..++++|+++ .|++.. .+.+|.+||+.+++
T Consensus 391 ~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~--~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 391 GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSS--HLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCC--EEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred CCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCC--cEEEecCCCCCcccCceEEEEECCCCC
Confidence 36899999997621 1334457888888889999999999 888876 26799999998764
No 140
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.29 E-value=1.3e-06 Score=47.55 Aligned_cols=56 Identities=16% Similarity=0.294 Sum_probs=41.5
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccc---cEeEEEecCCCCcEEEEEecC---------CCcEEEEECCCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVG---GVNDIAFSHPNKQLYVITCGD---------DKTIKVWDATNGV 64 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~s~~~---------~~~i~~w~~~~~~ 64 (65)
.|+.|++||+.++.... .+..+.. .+..++|+|+++ .++.++. ++.+.+||+.+++
T Consensus 34 ~d~~i~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~SpDg~--~la~~~~~~~~~~~s~~~~i~~~d~~~g~ 101 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYT---ILSNRTMKSVNASNYGLSPDRQ--FVYLESDYSKLWRYSYTATYYIYDLSNGE 101 (719)
T ss_dssp TTSCEEEEESSSCCEEE---EECHHHHHTTTCSEEEECTTSS--EEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCCCEEEEEcCCCcEEE---EEccccccccceeeEEECCCCC--eEEEEecCceeEEeecceEEEEEECCCCc
Confidence 47889999998765332 3333332 378999999999 7777655 6899999998764
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.29 E-value=1.1e-05 Score=39.98 Aligned_cols=59 Identities=10% Similarity=-0.000 Sum_probs=41.5
Q ss_pred ccccCeEEEEECCCCceEeeeEEee-cccc-cEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEID-AHVG-GVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~-~~~~-~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.++.|.+||..++.... .+. ++.. .+..++|+|++.. +++++..++.|.+||+.+++
T Consensus 7 ~~~~~~v~~~d~~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~-l~v~~~~~~~v~~~d~~~~~ 67 (337)
T 1pby_B 7 PARPDKLVVIDTEKMAVDK---VITIADAGPTPMVPMVAPGGRI-AYATVNKSESLVKIDLVTGE 67 (337)
T ss_dssp EETTTEEEEEETTTTEEEE---EEECTTCTTCCCCEEECTTSSE-EEEEETTTTEEEEEETTTCC
T ss_pred cCCCCeEEEEECCCCcEEE---EEEcCCCCCCccceEEcCCCCE-EEEEeCCCCeEEEEECCCCC
Confidence 4568899999998765333 232 2211 4688999999973 45566678899999998764
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.29 E-value=7.8e-06 Score=41.03 Aligned_cols=59 Identities=10% Similarity=0.250 Sum_probs=39.8
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec-CCCcEEEE--ECCCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVW--DATNGV 64 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w--~~~~~~ 64 (65)
.++.|.+|++...........+..+...+..++|+|++. .+++++ .++.+.+| |..+|+
T Consensus 260 ~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~--~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 260 GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEA--FVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSS--EEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCC--EEEEEEcCCCcEEEEEEeCCCCe
Confidence 357889999863222333334555555678999999999 676665 45899999 545553
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.26 E-value=8.3e-06 Score=40.61 Aligned_cols=54 Identities=9% Similarity=0.070 Sum_probs=39.3
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|.+||+.++.... .+. ....+..++|+|++. .+++++.++.+.+||..+++
T Consensus 274 ~~~v~~~d~~~~~~~~---~~~-~~~~~~~~~~s~dg~--~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 274 LNRLAKYDLKQRKLIK---AAN-LDHTYYCVAFDKKGD--KLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp ESEEEEEETTTTEEEE---EEE-CSSCCCEEEECSSSS--CEEEESBSSEEEEEETTTTE
T ss_pred cCeEEEEECccCeEEE---EEc-CCCCccceEECCCCC--EEEEecCCCeEEEEeccccc
Confidence 5678999998764333 232 223467899999988 66667788999999998764
No 144
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.19 E-value=2.4e-05 Score=40.05 Aligned_cols=50 Identities=10% Similarity=0.191 Sum_probs=39.8
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
..|.+||+.+.+... .+..+. ...++|+|+++ ++++++. +.|.+||..++
T Consensus 286 ~~v~viD~~t~~~v~---~i~~~~--p~~ia~spdg~--~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVA---RIPGRD--ALSMTIDQQRN--LMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp SEEEEEETTTTEEEE---EEECTT--CCEEEEETTTT--EEEEECS-SCEEEEECSSS
T ss_pred ceEEEEECCCCcEEE---EEecCC--eeEEEECCCCC--EEEEeCC-CeEEEEECCCC
Confidence 478899998765433 455555 78999999999 7887776 99999999887
No 145
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.12 E-value=4.1e-05 Score=38.13 Aligned_cols=59 Identities=7% Similarity=-0.070 Sum_probs=40.9
Q ss_pred ccccCeEEEEECCCCceEeeeEEeeccc-ccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHV-GGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.++.|.+||..++.... .+..+. .....++|+|++.. .+++...++.|.+||+.+++
T Consensus 17 ~~~~~~v~~~d~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~-~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 17 TNYPNNLHVVDVASDTVYK---SCVMPDKFGPGTAMMAPDNRT-AYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp EETTTEEEEEETTTTEEEE---EEECSSCCSSCEEEECTTSSE-EEEEETTTTEEEEEETTTTE
T ss_pred eCCCCeEEEEECCCCcEEE---EEecCCCCCCceeEECCCCCE-EEEEeCCCCcEEEEeCCCCc
Confidence 3457899999998765333 333222 24678999999983 34555678999999998763
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.09 E-value=3.1e-05 Score=38.67 Aligned_cols=55 Identities=11% Similarity=0.077 Sum_probs=41.6
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|.+||..++.... .+..+...+..++|+|++. .++.++.++.+.+||..+++
T Consensus 163 ~~~i~~~d~~~~~~~~---~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKT---AIQNTGKMSTGLALDSEGK--RLYTTNADGELITIDTADNK 217 (353)
T ss_dssp SCEEEEEETTTTEEEE---EECCCCTTCCCCEEETTTT--EEEEECTTSEEEEEETTTTE
T ss_pred CceEEEEcCCCCceEE---EecCCCCccceEEECCCCC--EEEEEcCCCeEEEEECCCCe
Confidence 6779999988764332 3433444568899999999 78888889999999988763
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.06 E-value=5.2e-05 Score=37.61 Aligned_cols=54 Identities=15% Similarity=0.366 Sum_probs=36.6
Q ss_pred ccCeEEEEECCC-CceEeeeEEeecccccEeEEEecCCCCcEEEEEec-CCCcEEEEEC
Q 039404 4 SRHIVQIYPCNG-GDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWDA 60 (65)
Q Consensus 4 ~~~~i~i~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~ 60 (65)
.++.|.+|++.. .........+..+.. +..++|+|++. .+++++ .++.+.+|++
T Consensus 251 ~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~--~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 251 TASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGK--YLIAAGQKSHHISVYEI 306 (343)
T ss_dssp TTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSS--EEEEECTTTCEEEEEEE
T ss_pred CCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCC--EEEEecCCCCeEEEEEE
Confidence 467899999873 112333333444433 78899999998 666665 6899999944
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.05 E-value=1.5e-05 Score=43.41 Aligned_cols=52 Identities=6% Similarity=-0.032 Sum_probs=39.9
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
.++.+.+||+.++... .+..+...+..++|+|++. .++.+ .++.|.+|++.+
T Consensus 99 ~~~~i~~~d~~~~~~~----~l~~~~~~~~~~~~SpdG~--~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 99 TQGGLVGFDMLARKVT----YLFDTNEETASLDFSPVGD--RVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp ETTEEEEEETTTTEEE----EEECCTTCCTTCEECTTSS--EEEEE-ETTEEEEEECBC
T ss_pred ECCEEEEEECCCCceE----EccCCcccccCCcCCCCCC--EEEEE-ECCeEEEEecCc
Confidence 4578999999876422 2444566788899999999 77774 679999999977
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.03 E-value=2.7e-05 Score=39.06 Aligned_cols=54 Identities=11% Similarity=0.089 Sum_probs=39.6
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec-CCCcEEEEECC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWDAT 61 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~~ 61 (65)
++.|.+|++.++. ......+..+...+..++|+|++. .+++++ .++.+.+|++.
T Consensus 62 ~~~v~~~~~~~g~-~~~~~~~~~~~~~p~~~a~spdg~--~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 62 EGGIAAWQIDGQT-AHKLNTVVAPGTPPAYVAVDEARQ--LVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp EEEEEEEEEETTE-EEEEEEEEEESCCCSEEEEETTTT--EEEEEETTTTEEEEEEEC
T ss_pred CceEEEEEecCCc-EEEeeeeecCCCCCEEEEECCCCC--EEEEEeCCCCEEEEEEeC
Confidence 5789999986543 333334444566778999999999 677766 77899999985
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.99 E-value=0.00017 Score=35.98 Aligned_cols=60 Identities=10% Similarity=0.032 Sum_probs=40.1
Q ss_pred cccCeEEEEECCCCceEeeeEE-eecccccEeEEEecCCCCcEEEEEe-cCCCcEEEEECCCCC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLE-IDAHVGGVNDIAFSHPNKQLYVITC-GDDKTIKVWDATNGV 64 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~-~~~~~i~~w~~~~~~ 64 (65)
..++.+.+||..++........ ..++...+..++|+|++. .++.+ ..++.+.+||..+++
T Consensus 203 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 203 NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ--RAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT--EEEEEESSSSEEEEEETTTCC
T ss_pred cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC--EEEEEeCCCCEEEEEECCCCc
Confidence 3467889999987653332111 112445577899999998 55554 456999999998764
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.99 E-value=9.4e-05 Score=42.32 Aligned_cols=53 Identities=19% Similarity=0.310 Sum_probs=41.2
Q ss_pred CeEE-EEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 6 HIVQ-IYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~-i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
..+. +|+...+... .+.+|...+..++|+|++. .+++++.++.+++||+.+++
T Consensus 358 ~~l~~~~d~~~~~~~----~l~~~~~~~~~~~~SpDG~--~la~~~~~~~v~~~d~~tg~ 411 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAE----KFEENLGNVFAMGVDRNGK--FAVVANDRFEIMTVDLETGK 411 (1045)
T ss_dssp EEEEEEEETTTCCEE----ECCCCCCSEEEEEECTTSS--EEEEEETTSEEEEEETTTCC
T ss_pred CceEEEEECCCCCce----EecCCccceeeeEECCCCC--EEEEECCCCeEEEEECCCCc
Confidence 4566 7787665422 2336777889999999999 89999999999999998764
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.96 E-value=5.8e-05 Score=41.34 Aligned_cols=29 Identities=10% Similarity=0.140 Sum_probs=24.9
Q ss_pred EeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 32 VNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 32 v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
+..++|+|+++ .+++++. +.|.+||+.++
T Consensus 111 v~~~~~SpDg~--~l~~~~~-~~i~~~d~~~~ 139 (741)
T 2ecf_A 111 IVDYQWSPDAQ--RLLFPLG-GELYLYDLKQE 139 (741)
T ss_dssp SCCCEECTTSS--EEEEEET-TEEEEEESSSC
T ss_pred cceeEECCCCC--EEEEEeC-CcEEEEECCCC
Confidence 67899999999 7777665 89999999876
No 153
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.95 E-value=8.1e-05 Score=37.00 Aligned_cols=56 Identities=5% Similarity=0.085 Sum_probs=38.7
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCC-C--cEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDD-K--TIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~-~--~i~~w~~~~~~ 64 (65)
++.|.+||..++... ...+..+..+..+++|+|++. .+++...+ + .+.+||+.+++
T Consensus 61 ~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 61 CQTLVQIETQLEPPK--VVAIQEGQSSMADVDITPDDQ--FAVTVTGLNHPFNMQSYSFLKNK 119 (331)
T ss_dssp TCEEEEEECSSSSCE--EEEEEECSSCCCCEEECTTSS--EEEECCCSSSSCEEEEEETTTTE
T ss_pred CCeEEEEECCCCcee--EEecccCCCCccceEECCCCC--EEEEecCCCCcccEEEEECCCCC
Confidence 568999999876531 223444555544599999999 77765544 3 89999998763
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.95 E-value=8.1e-05 Score=40.80 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=39.6
Q ss_pred CeEEEEECCCC---ceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 6 HIVQIYPCNGG---DEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 6 ~~i~i~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
+.|.+||+.++ .. . .+..+...+..++|+|+++ .++.++ ++.|.+||+.++
T Consensus 129 ~~i~~~d~~~~~~~~~-~---~l~~~~~~~~~~~~SPDG~--~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAV-R---QLTHGEGFATDAKLSPKGG--FVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp TEEEEEESSSCSTTSC-C---BCCCSSSCEEEEEECTTSS--EEEEEE-TTEEEEEETTTT
T ss_pred CcEEEEECCCCCcceE-E---EcccCCcccccccCCCCCC--EEEEEe-CCcEEEEecCCC
Confidence 67889998765 32 2 3556677899999999999 777765 568999999765
No 155
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.94 E-value=2.8e-05 Score=37.61 Aligned_cols=55 Identities=20% Similarity=0.147 Sum_probs=37.6
Q ss_pred cCeEEEEECC-CCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCC-----------CcEEEEECCCCC
Q 039404 5 RHIVQIYPCN-GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDD-----------KTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~-----------~~i~~w~~~~~~ 64 (65)
++.+.+|++. .+... ..+..+...+..++|+|++. .++.++.+ ..+.+||+.+++
T Consensus 194 ~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 194 TGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSPSGD--KVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp TSSCEEEEEETTSSCE---EECCCCSEEEEEEEECTTSS--EEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred CCCccEEEECCCCCCc---EEEecCCcccCCeEECCCCC--EEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 5667777764 22222 24555667788999999999 77666554 569999998764
No 156
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.90 E-value=1.8e-05 Score=43.18 Aligned_cols=56 Identities=7% Similarity=-0.027 Sum_probs=39.1
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.+.+||+.++.. ..+....++...+..++|+|+++ .++.++. +.|.+|+..+++
T Consensus 90 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~--~la~~~~-~~i~~~~~~~g~ 145 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ--QLIFIFE-NNIYYCAHVGKQ 145 (723)
T ss_dssp CSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT--CEEEEET-TEEEEESSSSSC
T ss_pred eeeEEEEECCCCce-EeccCCccccccccccEECCCCC--EEEEEEC-CeEEEEECCCCc
Confidence 47889999987643 21112233444578899999999 6777654 789999987764
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.84 E-value=0.00013 Score=39.79 Aligned_cols=56 Identities=16% Similarity=0.255 Sum_probs=40.0
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCC-----cEEEEECCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDK-----TIKVWDATNG 63 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~-----~i~~w~~~~~ 63 (65)
+..|.+||+.++.... +.....+...+..++|+|++. .+++++.+. .+.+||..++
T Consensus 234 ~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVY-LQTGEPKEKFLTNLSWSPDEN--ILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEEEEEEETTTTEEEE-CCCCSCTTCEEEEEEECTTSS--EEEEEEECTTSCEEEEEEEETTTC
T ss_pred eeEEEEEECCCCceEe-eccCCCCceeEeeEEEECCCC--EEEEEEeCCCCCeeEEEEEECCCC
Confidence 3578899998764222 111124566789999999999 777766664 8999999876
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.82 E-value=7.4e-05 Score=41.32 Aligned_cols=52 Identities=13% Similarity=-0.001 Sum_probs=39.3
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
+.+.+||+.++... .+..+...+...+|+|+++ .|+.+ .++.|.+|+..+++
T Consensus 92 ~~~~~~d~~~~~~~----~l~~~~~~~~~~~~SPdG~--~la~~-~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 92 ASYDIYDLNKRQLI----TEERIPNNTQWVTWSPVGH--KLAYV-WNNDIYVKIEPNLP 143 (740)
T ss_dssp EEEEEEETTTTEEC----CSSCCCTTEEEEEECSSTT--CEEEE-ETTEEEEESSTTSC
T ss_pred eEEEEEECCCCcEE----EcccCCCcceeeEECCCCC--EEEEE-ECCeEEEEECCCCc
Confidence 56779999876422 3555667889999999999 66665 47899999987653
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.82 E-value=0.00042 Score=35.00 Aligned_cols=55 Identities=15% Similarity=0.241 Sum_probs=36.4
Q ss_pred cCeEEEEECC--CCceEeeeEEeecccccEeEEEecCCCCcEEEEEec-CCCcEEEEE--CCCC
Q 039404 5 RHIVQIYPCN--GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWD--ATNG 63 (65)
Q Consensus 5 ~~~i~i~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~--~~~~ 63 (65)
++.|.+|++. ++. ......+.. ...+..++|+|++. ++++++ .++.+.+|. ..+|
T Consensus 281 ~~~i~v~~~~~~~g~-~~~~~~~~~-g~~~~~~~~spdg~--~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 281 ADGVAIFKVDETNGT-LTKVGYQLT-GIHPRNFIITPNGK--YLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp SCEEEEEEECTTTCC-EEEEEEEEC-SSCCCEEEECTTSC--EEEEEETTTTEEEEEEECTTTC
T ss_pred CCEEEEEEEcCCCCc-EEEeeEecC-CCCCceEEECCCCC--EEEEEECCCCCEEEEEEECCCC
Confidence 4689999985 232 332333433 44668999999999 666665 678999964 4454
No 160
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.79 E-value=8.4e-05 Score=38.94 Aligned_cols=50 Identities=8% Similarity=0.022 Sum_probs=34.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
+..||.+.+||+..+.... +...|.+++|+|.+. . .+..|+.+++|+...
T Consensus 142 ~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG~--~--vg~~dg~i~~~~~~~ 191 (388)
T 1xip_A 142 LNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQL--A--VLLKDRSFQSFAWRN 191 (388)
T ss_dssp EETTSEEEEEETTTCCEEE-------EEESEEEEEECSSEE--E--EEETTSCEEEEEEET
T ss_pred EECCCCEEEEEccCCcccc-------ccCCceEEEEcCCce--E--EEEcCCcEEEEcCCC
Confidence 4578888888887653211 234688999988763 3 455678888886654
No 161
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.77 E-value=0.00021 Score=36.65 Aligned_cols=54 Identities=20% Similarity=0.386 Sum_probs=38.6
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec----------CCCcEEEEECCCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG----------DDKTIKVWDATNGV 64 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~~~~i~~w~~~~~~ 64 (65)
.|+.|.+||..+++... .+.....+ .++|+|+++ +++.++ .++.|.+||..+++
T Consensus 29 ~d~~v~v~D~~t~~~~~---~i~~g~~p--~i~~spdg~--~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLG---MVPTAFNG--HVQVSNDGK--KIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GGCEEEEEETTTCCEEE---EEECCEEE--EEEECTTSS--EEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred ccCeEEEEECCCCeEEE---EecCCCCC--ceEECCCCC--EEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 36789999987765433 44444444 899999999 677664 35679999987653
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.71 E-value=0.0002 Score=36.34 Aligned_cols=53 Identities=8% Similarity=-0.067 Sum_probs=37.5
Q ss_pred eEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 7 IVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 7 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.|.+||+.++.... ...++...+....|+|++. .|+....+..+.+||+.+++
T Consensus 61 ~l~~~d~~~g~~~~---lt~~~~~~~~~~~~spdg~--~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 61 NYYLLDLNTQVATQ---LTEGRGDNTFGGFLSPDDD--ALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp EEEEEETTTCEEEE---CCCSSCBCSSSCEECTTSS--EEEEEETTTEEEEEETTTCC
T ss_pred eEEEEeCCCCceEE---eeeCCCCCccceEEcCCCC--EEEEEeCCCeEEEEECCCCc
Confidence 47777877654222 2334444444678999999 88888888899999998764
No 163
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.69 E-value=0.00082 Score=33.15 Aligned_cols=55 Identities=5% Similarity=0.018 Sum_probs=40.3
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
..++.|..|+..++ .. .+..+...+.++++++++. ++++...++.|..||..+++
T Consensus 47 ~~~~~i~~~~~~~~--~~---~~~~~~~~~~~l~~~~dg~--l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 47 VRQNRTWAWSDDGQ--LS---PEMHPSHHQNGHCLNKQGH--LIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp GGGTEEEEEETTSC--EE---EEESSCSSEEEEEECTTCC--EEEEETTTTEEEEECSTTCC
T ss_pred CCCCEEEEEECCCC--eE---EEECCCCCcceeeECCCCc--EEEEecCCCeEEEEcCCCCc
Confidence 34567888888765 22 3445566788999999998 77777667889999986653
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.66 E-value=0.00019 Score=39.31 Aligned_cols=53 Identities=15% Similarity=0.129 Sum_probs=37.8
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|.+||+.++..... ..+ ...+..++|+|+++ .++.+. ++.|++|++.+++
T Consensus 89 ~~~i~~~d~~~g~~~~~-~~l---~~~~~~~~~SPDG~--~la~~~-~~~i~~~~~~~g~ 141 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRG-NEL---PRPIQYLCWSPVGS--KLAYVY-QNNIYLKQRPGDP 141 (719)
T ss_dssp EEEEEEEETTTTEECCS-SCC---CSSBCCEEECSSTT--CEEEEE-TTEEEEESSTTSC
T ss_pred ceEEEEEECCCCccccc-eec---CcccccceECCCCC--EEEEEE-CCeEEEEeCCCCC
Confidence 57899999987643100 112 24578899999999 677764 7899999987653
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.61 E-value=0.0005 Score=34.74 Aligned_cols=55 Identities=15% Similarity=0.271 Sum_probs=36.5
Q ss_pred ccCeEEEEECCCCceEeeeEEe---ecccccEeEEEecCCCCcEEEEEecC--CCcEEEEECC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEI---DAHVGGVNDIAFSHPNKQLYVITCGD--DKTIKVWDAT 61 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~s~~~--~~~i~~w~~~ 61 (65)
.++.|.+|++.++. ......+ ..+......++|+|+++ +++.+.. ++.+.+|++.
T Consensus 231 ~~~~v~v~~~~~g~-~~~~~~~~~~~~~~~~~~~i~~spdg~--~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 231 IGGTVIAFRYADGM-LDEIQTVAADTVNAQGSGDIHLSPDGK--YLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TTCEEEEEEEETTE-EEEEEEEESCSSCCCCEEEEEECTTSS--EEEEEECSSSCEEEEEEEC
T ss_pred CCCeEEEEEecCCc-eEEeEEEecCCCCCCCcccEEECCCCC--EEEEECCCCCCEEEEEEEc
Confidence 46789999987543 2222222 22334467999999999 6655544 5899999885
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.59 E-value=0.0015 Score=33.31 Aligned_cols=58 Identities=9% Similarity=0.228 Sum_probs=38.6
Q ss_pred ccCeEEEEECCC-CceEeeeEEee-cccccEeEEEecCCCCcEEEEEec-CCCcEEEEECC-CC
Q 039404 4 SRHIVQIYPCNG-GDEVRQHLEID-AHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWDAT-NG 63 (65)
Q Consensus 4 ~~~~i~i~~~~~-~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~~-~~ 63 (65)
.++.+.+|++.. +........+. .+...+.+++|+|+++ .++++. .+..|.+|++. ++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~--~l~~~~~~~~~v~~~~~~~~g 178 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET--YLYSADLTANKLWTHRKLASG 178 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS--EEEEEETTTTEEEEEEECTTS
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC--EEEEEcCCCCEEEEEEECCCC
Confidence 477899999863 33222111221 2345688999999998 666654 46799999987 55
No 167
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.51 E-value=0.0013 Score=32.72 Aligned_cols=52 Identities=13% Similarity=0.081 Sum_probs=37.0
Q ss_pred ccccCeEEEEECCCCceEeeeEEeeccc-ccEeEEEecCCCCcEEEEEecCCCcEEEEEC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHV-GGVNDIAFSHPNKQLYVITCGDDKTIKVWDA 60 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~ 60 (65)
++.++.|.+||..+++... .+..+. ..+..+.+.|++. ++++ .+..+..+|.
T Consensus 11 ~~~~~~v~~~d~~tG~~~w---~~~~~~~~~~~~~~~~pdG~--ilvs--~~~~V~~~d~ 63 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVW---EYPLEKGWECNSVAATKAGE--ILFS--YSKGAKMITR 63 (276)
T ss_dssp CTTCSEEEEEETTTTEEEE---EEECCTTCCCCEEEECTTSC--EEEE--CBSEEEEECT
T ss_pred eCCCCEEEEEECCCCeEEE---EeCCCccCCCcCeEECCCCC--EEEe--CCCCEEEECC
Confidence 4678899999997776443 344443 3568889999998 7774 3666777776
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.51 E-value=0.0013 Score=33.15 Aligned_cols=56 Identities=14% Similarity=0.096 Sum_probs=40.4
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
+..+++|+..++..........++......++++|++. ++++...++.|..|++..
T Consensus 267 ~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~--lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 267 PVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT--VYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE--EEEEESSSCCEEEEEEEE
T ss_pred CcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC--EEEEECCCCEEEEEeCCc
Confidence 34788999877654442111134556678999999996 888888899999998753
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.44 E-value=0.00023 Score=39.46 Aligned_cols=55 Identities=9% Similarity=0.213 Sum_probs=38.6
Q ss_pred cCeEEEEECCCCceEeeeEEeeccccc-----EeEEEecCCCCcEEEEEecCC---------CcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGG-----VNDIAFSHPNKQLYVITCGDD---------KTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~l~s~~~~---------~~i~~w~~~~~~ 64 (65)
|+.|++|++.++.... .+.+|... ...++|+|+++ .++.++.+ +.+.+||+.+++
T Consensus 35 ~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Spdg~--~l~~~~~~~~~~r~~~~~~~~~~d~~~~~ 103 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSV---FLENSTFDEFGHSINDYSISPDGQ--FILLEYNYVKQWRHSYTASYDIYDLNKRQ 103 (740)
T ss_dssp TTEEEEEETTTCCEEE---EECTTTTTTCCSCCCEEEECTTSS--EEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCcEEEEECCCCceEE---EEechhhhhhcccccceEECCCCC--EEEEEECCeeeEEEccceEEEEEECCCCc
Confidence 7899999998875433 35555422 23478999999 77776654 566799998764
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.44 E-value=0.0034 Score=34.23 Aligned_cols=56 Identities=5% Similarity=0.117 Sum_probs=36.6
Q ss_pred CeEEEEECC-CCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCC--cEEEEECCCC
Q 039404 6 HIVQIYPCN-GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDK--TIKVWDATNG 63 (65)
Q Consensus 6 ~~i~i~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~--~i~~w~~~~~ 63 (65)
..|.+||+. ++..........++...+..+.|+|++. +++++..++ .+..|+..++
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~--l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS--LIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC--EEEEECTTSSCEEEEECTTTC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe--EEEEECCCCCeEEEEEECCCC
Confidence 468899987 4421111222334567788999999999 788888787 5555565444
No 171
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.42 E-value=0.0039 Score=34.22 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=39.7
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
.++.|.++|..++.... .+.. ......+.|+|++. ++++++.++.|.+||+.
T Consensus 175 ~~~~V~viD~~t~~v~~---~i~~-g~~p~~v~~SpDGr--~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKT---VLDT-GYAVHISRLSASGR--YLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp TTTEEEEEETTTCCEEE---EEEC-SSCEEEEEECTTSC--EEEEEETTSEEEEEETT
T ss_pred CCCeEEEEECCCCeEEE---EEeC-CCCccceEECCCCC--EEEEEcCCCeEEEEECC
Confidence 46789999998765443 3332 23456899999999 88888889999999985
No 172
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.41 E-value=0.00015 Score=38.88 Aligned_cols=51 Identities=4% Similarity=0.071 Sum_probs=38.3
Q ss_pred ccC--eEEEEECCCCceEeeeEEeecccccEeEEE--------ecCCCCcEEEEEecCCCcEEEEEC
Q 039404 4 SRH--IVQIYPCNGGDEVRQHLEIDAHVGGVNDIA--------FSHPNKQLYVITCGDDKTIKVWDA 60 (65)
Q Consensus 4 ~~~--~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~~l~s~~~~~~i~~w~~ 60 (65)
.++ .|.+||+.++... .+.++...+..+. |+|++. ++++++.++.+++|++
T Consensus 214 ~~~~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~spdg~--~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 214 TAREARLVTVDPRDGSVE----DLELPSKDFSSYRPTAITWLGYLPDGR--LAVVARREGRSAVFID 274 (582)
T ss_dssp CSSCEEEEEECTTTCCEE----ECCCSCSHHHHHCCSEEEEEEECTTSC--EEEEEEETTEEEEEET
T ss_pred CCCeeEEEEEcCCCCcEE----EccCCCcChhhhhhccccceeEcCCCc--EEEEEEcCCcEEEEEE
Confidence 345 7889998876432 3445555555556 999996 8999999999999987
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.37 E-value=0.0029 Score=31.59 Aligned_cols=55 Identities=9% Similarity=-0.020 Sum_probs=37.2
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCC----CcEEEEECCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDD----KTIKVWDATNG 63 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~----~~i~~w~~~~~ 63 (65)
.++.|.+||..++.... ....+...+.++++++++. ++++...+ +.|..||..++
T Consensus 64 ~~~~i~~~d~~~~~~~~---~~~~~~~~~~~i~~~~dg~--l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 64 FEGNIFKINPETKEIKR---PFVSHKANPAAIKIHKDGR--LFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp TTCEEEEECTTTCCEEE---EEECSSSSEEEEEECTTSC--EEEEECTTSSSCCEEEEECTTSC
T ss_pred CCCEEEEEeCCCCcEEE---EeeCCCCCcceEEECCCCc--EEEEeCCCCCCCceEEEEeCCCC
Confidence 35678888876654222 1223456789999999998 67766555 68888987665
No 174
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.35 E-value=0.00031 Score=36.17 Aligned_cols=56 Identities=7% Similarity=0.011 Sum_probs=31.1
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|+.|..||..+++.... +.. +.+.+..+..++. .+++++.|+.+..||..+|+
T Consensus 15 gs~dg~v~a~d~~tG~~~W~---~~~--~~~~s~p~~~~g~--~~v~~s~dg~l~a~d~~tG~ 70 (369)
T 2hz6_A 15 STLDGSLHAVSKRTGSIKWT---LKE--DPVLQVPTHVEEP--AFLPDPNDGSLYTLGSKNNE 70 (369)
T ss_dssp EETTSEEEEEETTTCCEEEE---EEC--CCSCCCC-----C--CEEECTTTCCEEEC-----C
T ss_pred EcCCCEEEEEECCCCCEEEE---ecC--CCceecceEcCCC--EEEEeCCCCEEEEEECCCCc
Confidence 45688999999988764432 222 2333333445566 67777889999999987764
No 175
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.25 E-value=0.0055 Score=32.29 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=37.5
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
.++.|++||+.+..... ....+...+..+.+. .+ -++.+..||.+.+||+.++
T Consensus 104 ~~~~l~v~dv~sl~~~~---~~~~~~~~v~~i~~~--~p--~~av~~~dG~L~v~dl~~~ 156 (388)
T 1xip_A 104 TRNALYSLDLEELSEFR---TVTSFEKPVFQLKNV--NN--TLVILNSVNDLSALDLRTK 156 (388)
T ss_dssp ESSEEEEEESSSTTCEE---EEEECSSCEEEEEEC--SS--EEEEEETTSEEEEEETTTC
T ss_pred cCCcEEEEEchhhhccC---ccceeecceeeEEec--CC--CEEEEECCCCEEEEEccCC
Confidence 57889999987644222 344556667776664 33 4777789999999999865
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.21 E-value=0.0027 Score=35.17 Aligned_cols=51 Identities=10% Similarity=0.148 Sum_probs=34.5
Q ss_pred eEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCc----------------EEEEECCCC
Q 039404 7 IVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKT----------------IKVWDATNG 63 (65)
Q Consensus 7 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~----------------i~~w~~~~~ 63 (65)
.|++||+.++..... .+.. ..+..++|+|++. .|+.+..+.. |.+|++.++
T Consensus 152 ~i~v~d~~tg~~~~~--~~~~--~~~~~~~wspDg~--~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 152 TIKFMKVDGAKELPD--VLER--VKFSCMAWTHDGK--GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp EEEEEETTTTEEEEE--EEEE--ECSCCEEECTTSS--EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC
T ss_pred EEEEEECCCCCCCcc--cccC--cccceEEEEeCCC--EEEEEEECCccccccccccccCCCCEEEEEECCCC
Confidence 799999987653321 1211 1256789999999 6666655544 999998765
No 177
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.20 E-value=0.0054 Score=31.27 Aligned_cols=54 Identities=9% Similarity=-0.026 Sum_probs=36.2
Q ss_pred cCeEEEEECC-CCceEeeeEEee--cccccEeEEEecCCCCcEEEEEec-CCCcEEEEECC
Q 039404 5 RHIVQIYPCN-GGDEVRQHLEID--AHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWDAT 61 (65)
Q Consensus 5 ~~~i~i~~~~-~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~~ 61 (65)
++.|.+|++. ++.. .....+. .+......++|+|+++ .++.++ .++.+.+|++.
T Consensus 166 ~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~spdg~--~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 166 ANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAMHPTGN--YLYALMEAGNRICEYVID 223 (365)
T ss_dssp TTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEECTTSS--EEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEECCCCC--EEEEEECCCCeEEEEEEe
Confidence 4678999987 5432 2222232 2345678999999998 666554 57899998764
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.16 E-value=0.0025 Score=35.22 Aligned_cols=56 Identities=7% Similarity=0.001 Sum_probs=36.2
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCc-------------EEEEECCCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKT-------------IKVWDATNGV 64 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~-------------i~~w~~~~~~ 64 (65)
.+..|++||+.++..... ..+... ....++|+|++. .++.++.+.. |.+|++.++.
T Consensus 145 ~~~~i~v~dl~tg~~~~~-~~~~~~--~~~~~~wspDg~--~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 145 DEAVLHVIDVDSGEWSKV-DVIEGG--KYATPKWTPDSK--GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp SCCEEEEEETTTCCBCSS-CCBSCC--TTCCCEECTTSS--EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred ceEEEEEEECCCCCCcCC-cccCcc--cccceEEecCCC--EEEEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 346899999987653200 011111 115789999999 7777766554 9999987653
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.09 E-value=0.0061 Score=29.82 Aligned_cols=50 Identities=12% Similarity=0.261 Sum_probs=33.7
Q ss_pred eEEEEECCCCceEeeeEEeecc--cccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 7 IVQIYPCNGGDEVRQHLEIDAH--VGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 7 ~i~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
.|.+|+... .... .+..+ ...+..++++|++. ++++ +.++.|.+|++...
T Consensus 230 ~i~~~~~~g-~~~~---~~~~~~~~~~~~~i~~~~~g~--l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 230 NLTIFTQDG-QLIS---ALESKVKHAQCFDVALMDDGS--VVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEECTTS-CEEE---EEEESSCCSCEEEEEEETTTE--EEEE-ETTTEEEEEECSCC
T ss_pred EEEEECCCC-CEEE---EEcccCCCCcceeEEECCCCc--EEEE-CCCCeEEEEEcccc
Confidence 788898643 2222 23222 23467899999887 6766 56899999998654
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.06 E-value=0.0031 Score=31.96 Aligned_cols=52 Identities=8% Similarity=-0.024 Sum_probs=34.2
Q ss_pred eEEEEECCCCceEeeeEEeeccccc-EeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 7 IVQIYPCNGGDEVRQHLEIDAHVGG-VNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 7 ~i~i~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.|.+|++.++... .+..+... .....|+|++. .++..+.+..+.+|++.+++
T Consensus 61 ~l~~~d~~~~~~~----~l~~~~~~~~~~~~~spdg~--~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 61 NYYLLNLETQQAV----QLTEGKGDNTFGGFISTDER--AFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp EEEEEETTTTEEE----ECCCSSCBCTTTCEECTTSS--EEEEEETTTEEEEEETTTCC
T ss_pred eEEEEECCCCcEE----EeecCCCCccccceECCCCC--EEEEEEcCCcEEEEECCCCC
Confidence 5667777665322 22222222 23378999999 78787778899999987763
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.95 E-value=0.0087 Score=29.95 Aligned_cols=37 Identities=5% Similarity=0.132 Sum_probs=23.0
Q ss_pred eEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec
Q 039404 7 IVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG 50 (65)
Q Consensus 7 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~ 50 (65)
.|.+|++.++.... +..... +..+.|+|++. .++..+
T Consensus 86 ~l~~~~~~~g~~~~----l~~~~~-~~~~~wspdg~--~l~~~~ 122 (347)
T 2gop_A 86 EIWVADLETLSSKK----ILEAKN-IRSLEWNEDSR--KLLIVG 122 (347)
T ss_dssp EEEEEETTTTEEEE----EEEESE-EEEEEECTTSS--EEEEEE
T ss_pred eEEEEECCCCceEE----EEcCCC-ccceeECCCCC--EEEEEE
Confidence 46677776654222 222223 88999999998 566554
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.85 E-value=0.013 Score=29.66 Aligned_cols=55 Identities=20% Similarity=0.076 Sum_probs=38.9
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.++.|.++|..+.+... .+. .......+++++++. ++++...++.|.++|..+++
T Consensus 62 ~~~~v~viD~~t~~~~~---~i~-~~~~p~~i~~~~~g~--lyv~~~~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 62 NSHVIFAIDINTFKEVG---RIT-GFTSPRYIHFLSDEK--AYVTQIWDYRIFIINPKTYE 116 (328)
T ss_dssp GGTEEEEEETTTCCEEE---EEE-CCSSEEEEEEEETTE--EEEEEBSCSEEEEEETTTTE
T ss_pred CCCEEEEEECcccEEEE---EcC-CCCCCcEEEEeCCCe--EEEEECCCCeEEEEECCCCe
Confidence 35789999998765433 233 234567889988875 66665578999999988753
No 183
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.70 E-value=0.018 Score=29.24 Aligned_cols=52 Identities=10% Similarity=0.081 Sum_probs=34.7
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecC-CCCcEEEEEecC------CCcEEEEECCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSH-PNKQLYVITCGD------DKTIKVWDATNG 63 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~s~~~------~~~i~~w~~~~~ 63 (65)
..|.+||+.++... .+..+...+..++|+| ++. .++.... ...+.+++...+
T Consensus 168 ~~l~~~d~~~g~~~----~l~~~~~~~~~~~~sp~dg~--~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 168 CRLMRVDLKTGEST----VILQENQWLGHPIYRPYDDS--TVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp EEEEEEETTTCCEE----EEEEESSCEEEEEEETTEEE--EEEEEECSCTTTSSCSEEEEETTSC
T ss_pred ceEEEEECCCCceE----EeecCCccccccEECCCCCC--EEEEEEecCCCCCcceEEEEeCCCC
Confidence 56888998876432 2334556688999999 888 5555443 337777777654
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.61 E-value=0.0037 Score=34.58 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=26.7
Q ss_pred ccccEeEEEecCCCCcEEEE-----EecCCCcEEEEECCCCC
Q 039404 28 HVGGVNDIAFSHPNKQLYVI-----TCGDDKTIKVWDATNGV 64 (65)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~l~-----s~~~~~~i~~w~~~~~~ 64 (65)
|...+..++|+|+++ .++ .++.+..|++||+.+++
T Consensus 119 ~~~~~~~~~~SPDG~--~la~~~~~~G~~~~~i~v~dl~tg~ 158 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGK--KVAFAQKPNAADEAVLHVIDVDSGE 158 (695)
T ss_dssp SCEEEEEEEECTTSS--EEEEEEEETTCSCCEEEEEETTTCC
T ss_pred CCEEEEEEEECCCCC--EEEEEECCCCCceEEEEEEECCCCC
Confidence 444678899999999 666 34445789999998875
No 185
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.58 E-value=0.0098 Score=33.27 Aligned_cols=54 Identities=11% Similarity=0.057 Sum_probs=36.9
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|..||+.+++..-. ++.+ .+...-.+...+. +++.++.|+.++.||.++|+
T Consensus 454 ~g~l~A~D~~tG~~~W~---~~~~-~~~~~g~~~tagg--lvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWE---VPYV-TIFNGGTLSTAGN--LVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEEETTTTEEEEE---EEES-SSCCCCEEEETTT--EEEEECTTSEEEEEETTTCC
T ss_pred ceeEEEEECCCCCeEeE---ccCC-CCccCccceECCC--EEEEECCCCcEEEEECCCCc
Confidence 47899999998764332 2222 1222224444666 78888999999999999886
No 186
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.55 E-value=0.00096 Score=34.39 Aligned_cols=54 Identities=11% Similarity=0.151 Sum_probs=26.8
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.++.+..||..+++... .+..+. ...++|.+. .++.++.++.+..||.++|+
T Consensus 98 g~~dg~v~a~D~~tG~~~w---~~~~~~----~~~~~p~~~--~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 98 GKKQDIWYVIDLLTGEKQQ---TLSSAF----ADSLSPSTS--LLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp CEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred EeCCCEEEEEECCCCcEEE---EecCCC----cccccccCC--EEEEEecCCEEEEEECCCCC
Confidence 4567888999988765332 222221 134456666 78888889999999998875
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.53 E-value=0.021 Score=28.60 Aligned_cols=49 Identities=16% Similarity=0.011 Sum_probs=31.9
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCC---C--cEEEEECCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDD---K--TIKVWDATNG 63 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~---~--~i~~w~~~~~ 63 (65)
+..|.+|++.++... .+ ..+..++|+|++. .++..+.+ + .|.+|++.++
T Consensus 42 ~~~l~~~d~~~~~~~----~l----~~~~~~~~SpDg~--~la~~~~~~~~~~~~l~~~~~~~g 95 (347)
T 2gop_A 42 ENTIVIENLKNNARR----FI----ENATMPRISPDGK--KIAFMRANEEKKVSEIWVADLETL 95 (347)
T ss_dssp EEEEEEEETTTCCEE----EE----ESCEEEEECTTSS--EEEEEEEETTTTEEEEEEEETTTT
T ss_pred cceEEEEeCCCCceE----Ec----ccCCCeEECCCCC--EEEEEEeccCCCcceEEEEECCCC
Confidence 456778888765422 22 3467899999999 66655432 3 4777787765
No 188
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.50 E-value=0.01 Score=32.43 Aligned_cols=33 Identities=6% Similarity=-0.108 Sum_probs=26.4
Q ss_pred ccccEeEEEecCCCCcEEEEEecCC----------CcEEEEECCC
Q 039404 28 HVGGVNDIAFSHPNKQLYVITCGDD----------KTIKVWDATN 62 (65)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~l~s~~~~----------~~i~~w~~~~ 62 (65)
|...+..++|+|+++ .|+.++.+ ..|.+|++.+
T Consensus 128 ~~~~~~~~~~spDg~--~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 128 GGLRWADPVLLPERG--EVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp TCEEEEEEEEETTTT--EEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred CCccccCcEECCCCC--EEEEEEecccCCCCCCceeEEEEEECCC
Confidence 456678999999999 77776655 5899999876
No 189
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.43 E-value=0.029 Score=28.30 Aligned_cols=52 Identities=8% Similarity=0.032 Sum_probs=37.9
Q ss_pred CeEEEEECCCCceEeeeEEee-cccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEID-AHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
+.|.+||..++.... .+. ++......+++++++. ++++...++.|..|+...
T Consensus 69 ~~i~~~d~~~g~~~~---~~~~~~~~~p~gia~d~~g~--l~v~d~~~~~v~~~~~~g 121 (329)
T 3fvz_A 69 DTILVIDPNNAEILQ---SSGKNLFYLPHGLSIDTDGN--YWVTDVALHQVFKLDPHS 121 (329)
T ss_dssp CCEEEECTTTCCEEE---EECTTTCSSEEEEEECTTSC--EEEEETTTTEEEEECTTC
T ss_pred CcEEEEECCCCeEEe---ccCCCccCCceEEEECCCCC--EEEEECCCCEEEEEeCCC
Confidence 468889987665332 222 3334678999999998 888888889999998754
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.38 E-value=0.023 Score=28.38 Aligned_cols=39 Identities=10% Similarity=0.041 Sum_probs=30.3
Q ss_pred EeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 24 EIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 24 ~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.+..+.....+++|++++. +++++..++.|..||..+++
T Consensus 39 ~~~~~~~~~~~~~~~~~g~--l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQ--LFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp EEESSCCCEEEEEECTTSC--EEEEETTTCEEEEECTTTCC
T ss_pred EEeccCccccCcEECCCCC--EEEEECCCCEEEEEeCCCCc
Confidence 3445556678999999988 78787888999999987653
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.31 E-value=0.029 Score=27.09 Aligned_cols=54 Identities=4% Similarity=-0.095 Sum_probs=36.4
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|.+|+........ ....+...+.++++++++. ++++...++.|.+++....
T Consensus 212 ~~~v~~~~~~~~~~~~---~~~~~~~~p~~i~~~~~g~--l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 212 TNQVVKLLAGSTTSTV---LPFTGLNTPLAVAVDSDRT--VYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp TSCEEEECTTCSCCEE---CCCCSCSCEEEEEECTTCC--EEEEEGGGTEEEEECCCGG
T ss_pred CCcEEEEcCCCCccee---eccCCCCCceeEEECCCCC--EEEEECCCCEEEEEcCCCc
Confidence 4567777765432111 1112234578999999998 8888888999999988654
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.29 E-value=0.04 Score=28.63 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=37.0
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec-CCCcEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~~~~~ 64 (65)
+.|.++|..+.+... .+.. .....++.|+|+++. .++++. .++.|.++|..+++
T Consensus 298 ~~V~VID~~t~~vv~---~i~~-g~~p~~i~~s~Dg~~-~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 298 KEVTSVTGLVGQTSS---QISL-GHDVDAISVAQDGGP-DLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred CeEEEEECCCCEEEE---EEEC-CCCcCeEEECCCCCe-EEEEEcCCCCeEEEEECCCCC
Confidence 467788887654333 3322 224689999999984 455554 58999999998764
No 193
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.24 E-value=0.026 Score=29.53 Aligned_cols=51 Identities=8% Similarity=-0.048 Sum_probs=35.6
Q ss_pred eEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec----------CCCcEEEEECCCCC
Q 039404 7 IVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG----------DDKTIKVWDATNGV 64 (65)
Q Consensus 7 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~~~~i~~w~~~~~~ 64 (65)
.+.++|..+.+... .+..-..+ .+.++|++. .++.+. .++.|.++|..+++
T Consensus 47 ~vsvID~~t~~v~~---~i~vG~~P--~i~~spDg~--~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 47 ENWVSCAGCGVTLG---HSLGAFLS--LAVAGHSGS--DFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp EEEEEETTTTEEEE---EEEECTTC--EEEECTTSS--CEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred eEEEEECCCCeEEE---EEeCCCCC--ceEECCCCC--EEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 67788988765443 34333344 799999999 555543 46889999998764
No 194
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.09 E-value=0.056 Score=28.31 Aligned_cols=53 Identities=9% Similarity=0.098 Sum_probs=36.5
Q ss_pred eEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec-CCCcEEEEECCCCC
Q 039404 7 IVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWDATNGV 64 (65)
Q Consensus 7 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~~~~~ 64 (65)
.+.++|..+.+... .+... ....++.|+|++.. .+++.. .++.|.++|..+++
T Consensus 295 ~~~ViD~~t~~vv~---~i~vg-~~p~gi~~s~Dg~~-l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 295 NTSSVTASVGQTSG---PISNG-HDSDAIIAAQDGAS-DNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEESSSCCEEE---CCEEE-EEECEEEECCSSSC-EEEEEETTTTEEEEEESSSCE
T ss_pred CEEEEECCCCeEEE---EEECC-CCcceEEECCCCCE-EEEEccCCCCeEEEEECCCCc
Confidence 34588988765433 22222 14688999999874 566666 58999999998764
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.94 E-value=0.047 Score=28.89 Aligned_cols=53 Identities=9% Similarity=0.133 Sum_probs=36.0
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec----------CCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG----------DDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~~~~i~~w~~~~~~ 64 (65)
++.|.++|..+..... .+..-..+ .+.++|+++ .++.+. .++.|.+||..+.+
T Consensus 58 ~~~V~ViD~~t~~v~~---~I~vG~~P--~va~spDG~--~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIG---MIDGGFLP--NPVVADDGS--FIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp SEEEEEEETTTTEEEE---EEEECSSC--EEEECTTSS--CEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCEEEEEECCCCeEEE---EEECCCCC--cEEECCCCC--EEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 4678899988765443 34333334 499999999 555543 35789999988764
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.92 E-value=0.087 Score=29.11 Aligned_cols=57 Identities=18% Similarity=0.047 Sum_probs=37.4
Q ss_pred ccccCeEEEEECC--CCceEeeeEEeecccccEeEEEec----CCCCcEEEEE-ecCCCcEEEEECCCCC
Q 039404 2 AYSRHIVQIYPCN--GGDEVRQHLEIDAHVGGVNDIAFS----HPNKQLYVIT-CGDDKTIKVWDATNGV 64 (65)
Q Consensus 2 ~~~~~~i~i~~~~--~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~l~s-~~~~~~i~~w~~~~~~ 64 (65)
++.++.|.+||+. +..... .+... .....++|+ |+++ +++. ...++.+.++|..+.+
T Consensus 214 ~~~dg~V~viD~~~~t~~~v~---~i~~G-~~P~~ia~s~~~~pDGk--~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 214 IGRDGKVNMIDLWMKEPTTVA---EIKIG-SEARSIETSKMEGWEDK--YAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp EETTSEEEEEETTSSSCCEEE---EEECC-SEEEEEEECCSTTCTTT--EEEEEEEETTEEEEEETTTCC
T ss_pred EcCCCeEEEEECCCCCCcEeE---EEecC-CCCceeEEccccCCCCC--EEEEEEccCCeEEEEECCCCc
Confidence 3457889999985 433222 34332 234789999 6998 5554 5567899999976643
No 197
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.68 E-value=0.056 Score=30.31 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=35.9
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
+.|..||+.+++..-. .+ +..+.....+...+. .++.++.++.++.||.++|+
T Consensus 457 g~l~A~D~~tG~~~W~---~~-~~~~~~~g~~~~~g~--~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWS---VE-HVSPWNGGTLTTAGN--VVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp EEEEEEETTTTEEEEE---EE-ESSSCCCCEEEETTT--EEEEECTTSEEEEEETTTCC
T ss_pred cEEEEEeCCCCcEEee---cC-CCCCCcCcceEeCCC--EEEEECCCCcEEEEECCCCc
Confidence 6788999988764332 21 122233334455666 77778899999999999885
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.68 E-value=0.089 Score=27.38 Aligned_cols=50 Identities=8% Similarity=0.090 Sum_probs=34.1
Q ss_pred eEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec----------CCCcEEEEECCCC
Q 039404 7 IVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG----------DDKTIKVWDATNG 63 (65)
Q Consensus 7 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~~~~i~~w~~~~~ 63 (65)
.|.++|..+++... .+.....+ .+.++|+++ .++.+. .++.|.++|..+.
T Consensus 48 ~v~v~D~~t~~~~~---~i~~g~~p--~i~~spDg~--~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 48 QQWVLDAGSGSILG---HVNGGFLP--NPVAAHSGS--EFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred EEEEEECCCCeEEE---EecCCCCC--CeEECCCCC--EEEEEeccccccccCCCCCeEEEEECCCC
Confidence 67889987765332 34332233 899999999 666654 3678999998764
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.53 E-value=0.085 Score=26.23 Aligned_cols=54 Identities=17% Similarity=0.259 Sum_probs=36.1
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.++.|..||.. ++... .+... .....+...+.+. .++++..++.+..+|..+|+
T Consensus 144 ~~~~v~~~d~~-G~~~w---~~~~~-~~~~~~~~~~~g~--~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 144 ATSEVREIAPN-GQLLN---SVKLS-GTPFSSAFLDNGD--CLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp TTTEEEEECTT-SCEEE---EEECS-SCCCEEEECTTSC--EEEECBTTSEEEEECTTTCC
T ss_pred CCCEEEEECCC-CCEEE---EEECC-CCccceeEcCCCC--EEEEeCCCCeEEEEeCcCCc
Confidence 45678888876 54333 23322 2345667778888 78887778889999888764
No 200
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.53 E-value=0.08 Score=25.87 Aligned_cols=52 Identities=12% Similarity=0.286 Sum_probs=35.2
Q ss_pred ccCeEEEEECCCCceEeeeEEeec--ccccEeEEEecCCCCcEEEEEecCCC-cEEEEECC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDA--HVGGVNDIAFSHPNKQLYVITCGDDK-TIKVWDAT 61 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~~~~~-~i~~w~~~ 61 (65)
.++.|.+|+.... ... .+.. +......+++++++. ++++...++ .|.+|+..
T Consensus 183 ~~~~i~~~~~~g~-~~~---~~~~~g~~~~p~~i~~d~~G~--l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 183 RAHCVKVFNYEGQ-YLR---QIGGEGITNYPIGVGINSNGE--ILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp GGTEEEEEETTCC-EEE---EESCTTTSCSEEEEEECTTCC--EEEEECSSSCEEEEECTT
T ss_pred CCCEEEEEcCCCC-EEE---EEccCCccCCCcEEEECCCCC--EEEEeCCCCEEEEEECCC
Confidence 3567888887532 222 2322 235678999999988 777776665 99999864
No 201
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.47 E-value=0.082 Score=28.32 Aligned_cols=52 Identities=8% Similarity=0.046 Sum_probs=36.0
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec----------CCCcEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG----------DDKTIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~----------~~~~i~~w~~~~~~ 64 (65)
+.|.++|..+.+... .+..-..+ .+.++|+++ .++.+. .++.|.++|..+++
T Consensus 99 ~~VsVID~~t~~vv~---~I~vG~~P--gia~SpDgk--~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 99 TQQFVIDGSTGRILG---MTDGGFLP--HPVAAEDGS--FFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp EEEEEEETTTTEEEE---EEEECSSC--EEEECTTSS--CEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CeEEEEECCCCEEEE---EEECCCCC--ceEECCCCC--EEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 688899998765443 33323334 899999999 555543 36689999987754
No 202
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.38 E-value=0.11 Score=26.38 Aligned_cols=53 Identities=8% Similarity=0.049 Sum_probs=33.6
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecC-CCCcEEEEEecCC------CcEEEEECCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSH-PNKQLYVITCGDD------KTIKVWDATNG 63 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~s~~~~------~~i~~w~~~~~ 63 (65)
+..|.+||+.++.... +..+...+..+.|+| ++. .++..+.+ ..|.+|++..+
T Consensus 167 ~~~l~~~d~~~g~~~~----~~~~~~~~~~~~~sp~dg~--~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 167 TCRLIKVDIETGELEV----IHQDTAWLGHPIYRPFDDS--TVGFCHEGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp CEEEEEEETTTCCEEE----EEEESSCEEEEEEETTEEE--EEEEEECSCSSSCSCCCEEEETTSC
T ss_pred cceEEEEECCCCcEEe----eccCCcccccceECCCCCC--EEEEEecCCCCCCCceEEEEECCCC
Confidence 4578889987764322 223556678899999 676 44443322 46778887654
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.37 E-value=0.079 Score=29.74 Aligned_cols=51 Identities=10% Similarity=0.088 Sum_probs=31.2
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCC--------------cEEEEECCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDK--------------TIKVWDATNG 63 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~--------------~i~~w~~~~~ 63 (65)
..|++||+.++..... .. +...+..++|+|+ . .++.+..+. .|.+|++.++
T Consensus 189 ~~i~v~dl~tg~~~~~--~~--~~~~~~~~~wspD-~--~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~ 253 (741)
T 1yr2_A 189 RTVKFVGVADGKPLAD--EL--KWVKFSGLAWLGN-D--ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTP 253 (741)
T ss_dssp EEEEEEETTTCCEEEE--EE--EEEESCCCEESTT-S--EEEEEECCCC--------CCCCCEEEEEETTSC
T ss_pred EEEEEEECCCCCCCCc--cC--CCceeccEEEECC-C--EEEEEEecCcccccccccCCCCCEEEEEECCCC
Confidence 4688999987754321 11 1111247899999 7 555554443 3888888654
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.05 E-value=0.13 Score=25.36 Aligned_cols=54 Identities=11% Similarity=0.251 Sum_probs=34.2
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
++.|.+|+..++.... .+..+...+.++++++++.. ++++...++.|..+++..
T Consensus 246 ~~~i~~~d~~~g~~~~---~~~~~~~~~~~i~~~~dg~~-l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKM---RIRCPFEKPSNLHFKPQTKT-IFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTEEEEECTTCBSCSE---EEECSSSCEEEEEECTTSSE-EEEEETTTTEEEEEECSS
T ss_pred CCEEEEEcCCCCcEeE---EEeCCCCCceeEEECCCCCE-EEEEeCCCCeEEEEeCCC
Confidence 4567788876433222 23344466889999998873 334445567888888754
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.84 E-value=0.21 Score=26.83 Aligned_cols=54 Identities=17% Similarity=0.393 Sum_probs=36.9
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEec-CCCcEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~~~~~ 64 (65)
+.|.+.|..+.+... .+... .....+.|+|+++. .+++.. .++.|.++|..+++
T Consensus 350 ~~VsVID~~T~kvv~---~I~vg-~~P~gia~spDg~~-~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 350 RFVVVLNAETGERIN---KIELG-HEIDSINVSQDAEP-LLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEEEEEETTTCCEEE---EEEEE-EEECEEEECCSSSC-EEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEECCCCeEEE---EEECC-CCcCeEEEccCCCE-EEEEEcCCCCeEEEEECCCCC
Confidence 468888888765444 22211 23578999999873 444444 68999999998764
No 206
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.73 E-value=0.097 Score=30.69 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=26.1
Q ss_pred cEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 31 GVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 31 ~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.+.++...++.. ++++-+.|+.+++|++.+++
T Consensus 237 ~~~~~~~~~~~~--~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYN--VLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTT--EEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCc--EEEEEECCCEEEEEECCCCC
Confidence 356666667777 89999999999999998874
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.61 E-value=0.17 Score=24.87 Aligned_cols=32 Identities=22% Similarity=0.514 Sum_probs=25.4
Q ss_pred ccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 30 GGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 30 ~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
.....+++++++. ++++...++.|..|+..++
T Consensus 226 ~~p~~i~~d~~G~--l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 226 GGADGMDFDEDNN--LLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp CEEEEEEEBTTCC--EEEEEETTTEEEEECTTCB
T ss_pred CCCCceEECCCCC--EEEEEcCCCEEEEEcCCCC
Confidence 4567899999988 7777667888999998754
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.59 E-value=0.3 Score=27.54 Aligned_cols=56 Identities=14% Similarity=0.135 Sum_probs=33.5
Q ss_pred CeEEEEECCCCceE-eeeEEeecccccEeEEEecCCCCcEEEEEecC-----CCcEEEEECCCC
Q 039404 6 HIVQIYPCNGGDEV-RQHLEIDAHVGGVNDIAFSHPNKQLYVITCGD-----DKTIKVWDATNG 63 (65)
Q Consensus 6 ~~i~i~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-----~~~i~~w~~~~~ 63 (65)
..|.+|++.++... ..+.....+...+..+.|+|+++ .++..+. ...+.+||+.++
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~--~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR--WVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC--EEEEEEECTTCSCCEEEEEEEETT
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC--EEEEEEEccCCCcceEEEEECCCC
Confidence 35778888654321 11111222333578899999998 5555443 348888888654
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.55 E-value=0.047 Score=30.47 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=25.1
Q ss_pred ccccEeEEEecCCCCcEEEEE-----ecCCCcEEEEECCCCC
Q 039404 28 HVGGVNDIAFSHPNKQLYVIT-----CGDDKTIKVWDATNGV 64 (65)
Q Consensus 28 ~~~~v~~~~~~~~~~~~~l~s-----~~~~~~i~~w~~~~~~ 64 (65)
+...+..++|+|+++ .++- ++....|+++|+.+|+
T Consensus 127 ~~~~l~~~~~SpDg~--~lAy~~~~~G~~~~~i~v~dl~tg~ 166 (693)
T 3iuj_A 127 GTTALDQLSFSRDGR--ILAYSLSLAGSDWREIHLMDVESKQ 166 (693)
T ss_dssp SCCEEEEEEECTTSS--EEEEEEECSSCCEEEEEEEETTTCS
T ss_pred CcEEEEEEEECCCCC--EEEEEEecCCCceEEEEEEECCCCC
Confidence 334577889999999 5552 2333689999998875
No 210
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.53 E-value=0.19 Score=28.26 Aligned_cols=54 Identities=9% Similarity=0.053 Sum_probs=34.9
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|..||..+++..-. .+.. .......+...+. +++.++.++.++.||.++|+
T Consensus 437 ~g~l~A~D~~tG~~~W~---~~~~-~~~~~~~~~t~gg--~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWK---VPYP-THWNGGTLSTAGN--LVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp EEEEEEEETTTTEEEEE---EEES-SSCCCCEEEETTT--EEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEeCCCCcEEEE---ccCC-CCCcCceeEeCCC--EEEEECCcccchhhhhhcCh
Confidence 47889999988764332 1111 1222222333566 78888899999999998875
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=94.11 E-value=0.32 Score=25.87 Aligned_cols=54 Identities=20% Similarity=0.364 Sum_probs=37.0
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEE-ecCCCcEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVIT-CGDDKTIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s-~~~~~~i~~w~~~~~~ 64 (65)
..|-++|..+.+... .+.. ...+..+.++++++. .|++ ...++.|.++|..+++
T Consensus 311 ~~V~viD~~t~kv~~---~i~v-g~~~~~lavs~D~~~-~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 311 RFVVVLDAKTGERLA---KFEM-GHEIDSINVSQDEKP-LLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEEEEEETTTCCEEE---EEEE-EEEECEEEECSSSSC-EEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEECCCCeEEE---EEEC-CCCcceEEECCCCCe-EEEEEcCCCCeEEEEECCCCc
Confidence 457788888766443 2221 125678999999863 4444 5568999999998764
No 212
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=93.95 E-value=0.42 Score=26.75 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=33.3
Q ss_pred EEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEe---cCCCcEEEEECCCCC
Q 039404 8 VQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITC---GDDKTIKVWDATNGV 64 (65)
Q Consensus 8 i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~---~~~~~i~~w~~~~~~ 64 (65)
|.+|++.++.... .+..+.+.+..++++|++.. ++++. ...+.+..||+.+++
T Consensus 361 l~~~~~~~g~~~~---~l~~~~~~v~~~~~s~d~~~-l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLK---IFPLEVGSVVGYSGQKKDTE-IFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEE---EECCCSSEEEEEECCTTCSE-EEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEE---ecCCCCceEEEEecCCCCCE-EEEEEeCCCCCCEEEEEECCCCc
Confidence 5566764443222 34445667788999998873 33332 245789999987764
No 213
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=93.83 E-value=0.27 Score=24.17 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=26.8
Q ss_pred ecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 26 DAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 26 ~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
..+......++|+|++. .+++...++.|..|++.
T Consensus 168 ~~~~~~~~gi~~s~dg~--~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 168 IRDRVKPNGLAFLPSGN--LLVSDTGDNATHRYCLN 201 (296)
T ss_dssp ECCCSSEEEEEECTTSC--EEEEETTTTEEEEEEEC
T ss_pred ecCCCCCccEEECCCCC--EEEEeCCCCeEEEEEEC
Confidence 34445668899999999 66777778899999885
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=93.74 E-value=0.29 Score=27.42 Aligned_cols=51 Identities=6% Similarity=0.096 Sum_probs=31.1
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCC-------------CcEEEEECCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDD-------------KTIKVWDATNG 63 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~-------------~~i~~w~~~~~ 63 (65)
..|+++|+.++..... .+... ....++|+ +++ .|+.+..+ ..|.+|++.++
T Consensus 155 ~~i~v~dl~tg~~~~~--~~~~~--k~~~~~Ws-Dg~--~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~ 218 (693)
T 3iuj_A 155 REIHLMDVESKQPLET--PLKDV--KFSGISWL-GNE--GFFYSSYDKPDGSELSARTDQHKVYFHRLGTA 218 (693)
T ss_dssp EEEEEEETTTCSEEEE--EEEEE--ESCCCEEE-TTT--EEEEEESSCCC-------CCCCEEEEEETTSC
T ss_pred EEEEEEECCCCCCCcc--ccCCc--eeccEEEe-CCC--EEEEEEecCcccccccccCCCcEEEEEECCCC
Confidence 5688999988753321 12111 12467899 988 55555544 34888888654
No 215
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.65 E-value=0.28 Score=23.62 Aligned_cols=54 Identities=11% Similarity=0.006 Sum_probs=35.1
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|.+|+........ ....+.....++++++++. ++++...++.|..|+....
T Consensus 170 ~~~i~~~~~~~~~~~~---~~~~~~~~p~~i~~d~~g~--l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVV---LPFTDITAPWGIAVDEAGT--VYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp GTEEEEECTTTCCEEE---CCCSSCCSEEEEEECTTCC--EEEEETTTSCEEEECTTCS
T ss_pred CCEEEEEecCCCceEe---ecccCCCCceEEEECCCCC--EEEEECCCCcEEEEcCCCC
Confidence 4567777766543211 1112224578899999887 7777777888999987543
No 216
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.26 E-value=0.4 Score=24.26 Aligned_cols=52 Identities=2% Similarity=-0.121 Sum_probs=34.8
Q ss_pred CeEEEEECCCCceEeeeEEeecc-cccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAH-VGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
+.|.++|..+..... .+... ......++++|++. .++.+.. .+..+|..+++
T Consensus 203 ~~v~~id~~t~~v~~---~~~~~~g~~p~~la~~~d~~--~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 203 PSLYRIDAETFTVEK---QFKFKLGDWPSEVQLNGTRD--TLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp CEEEEEETTTTEEEE---EEECCTTCCCEEEEECTTSC--EEEEESS--SEEEEETTCSS
T ss_pred ceEEEEECCCCeEEE---EEecCCCCCceeEEEecCCC--EEEEEcc--EEEEEECCCCc
Confidence 678889987654322 22211 23568999999988 6666544 88899987654
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.11 E-value=0.39 Score=23.82 Aligned_cols=58 Identities=10% Similarity=0.183 Sum_probs=36.0
Q ss_pred cCeEEEEECC--CCceEe--eeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCN--GGDEVR--QHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~--~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|.+|++. ++.... ....+.........+++.+++. ++++...++.|..||..+|+
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~--lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK--LWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC--EEEEEETTTEEEEECTTTCC
T ss_pred CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC--EEEEEcCCCEEEEEcCCCce
Confidence 4567777763 332111 1112222334567899999988 77776677889999987654
No 218
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=93.03 E-value=0.12 Score=30.74 Aligned_cols=30 Identities=17% Similarity=0.196 Sum_probs=23.8
Q ss_pred eEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 33 NDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 33 ~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.++...++.. ++++-+.|+.+++|++.++.
T Consensus 241 vs~~~~~~~~--~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 241 ISMIFLSTYN--VLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp SCCEEETTTT--EEEEEBTTCEEEEEETTTTE
T ss_pred EEeeccCCcc--EEEEEeCCCEEEEEECCCCC
Confidence 4445555667 89999999999999998874
No 219
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.36 E-value=0.45 Score=26.43 Aligned_cols=54 Identities=20% Similarity=0.181 Sum_probs=32.5
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|.-||+.+++..-.. .. . .+...-.....+. +++.++.|+.++.+|.++|+
T Consensus 465 ~G~l~A~D~~tG~~~W~~-~~--~-~~~~~g~~~tagg--lvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEH-KE--H-LPLWAGVLATAGN--LVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEE-EE--S-SCCCSCCEEETTT--EEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECCCCCEEEEe-cC--C-CCCcccceEeCCC--EEEEECCCCcEEEEECCCCC
Confidence 567888898877643311 11 1 1111111111355 67778899999999999885
No 220
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.17 E-value=0.52 Score=26.10 Aligned_cols=54 Identities=11% Similarity=-0.021 Sum_probs=32.4
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|..+|..+++..-. +.. ...+....+...+. .++.++.|+.+..+|.++|+
T Consensus 443 ~g~l~a~D~~tG~~~W~---~~~-~~~~~~~~~~t~gg--~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWT---KWE-KFAAWGGTLYTKGG--LVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CEEEEEECTTTCCEEEE---EEE-SSCCCSBCEEETTT--EEEEECTTSEEEEEETTTCC
T ss_pred CCeEEEEECCCCCEEEE---ecC-CCCccceeEEECCC--EEEEEcCCCeEEEEECCCCC
Confidence 46788889887764331 111 11112211222345 66778889999999998875
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.82 E-value=0.63 Score=23.14 Aligned_cols=50 Identities=18% Similarity=0.066 Sum_probs=31.7
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
++.|..|+.. +. .. .+......+..+.+++++. ++++...++.|..|+..
T Consensus 66 ~~~i~~~~~~-g~-~~---~~~~~~~~~~gl~~d~dG~--l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 66 GRRVLGWRED-GT-VD---VLLDATAFTNGNAVDAQQR--LVHCEHGRRAITRSDAD 115 (305)
T ss_dssp TTEEEEEETT-SC-EE---EEEESCSCEEEEEECTTSC--EEEEETTTTEEEEECTT
T ss_pred CCEEEEEeCC-CC-EE---EEeCCCCccceeeECCCCC--EEEEECCCCEEEEECCC
Confidence 4556667653 22 11 2333445678999999988 67665556778888764
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.01 E-value=0.99 Score=23.82 Aligned_cols=33 Identities=9% Similarity=0.317 Sum_probs=23.2
Q ss_pred cccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 29 VGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 29 ~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
.....+++++|++. .++.+..++.|..|+..++
T Consensus 218 ~~~p~~iav~p~~g--~lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 218 SGKIGAVALDETEE--WLYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp CSCCCBCEECTTSS--EEEEECTTCEEEEEETTTC
T ss_pred cCCcEEEEEeCCCC--eEEEEECCCcEEEEECCCC
Confidence 34567889999555 3444666788999988654
No 223
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=90.89 E-value=0.73 Score=26.75 Aligned_cols=29 Identities=24% Similarity=0.495 Sum_probs=22.6
Q ss_pred EeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 32 VNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 32 v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
|.++.+ +.. ++++-+.|+.+++|++.++.
T Consensus 224 Is~~~~--~~~--fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 224 ISCKLF--HER--YLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEE--TTT--EEEEEETTCEEEEEETTTTE
T ss_pred EEEecc--CCc--EEEEEEcCCeEEEEEcCCCc
Confidence 444444 456 89999999999999999874
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=90.66 E-value=0.93 Score=22.92 Aligned_cols=51 Identities=16% Similarity=0.082 Sum_probs=31.5
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.|..|+..++.. . .+. ....+.++.+++++. ++++. . ..+..||..+++
T Consensus 70 ~~~i~~~d~~~~~~-~---~~~-~~~~v~~i~~~~dg~--l~v~~-~-~gl~~~d~~~g~ 120 (326)
T 2ghs_A 70 ERELHELHLASGRK-T---VHA-LPFMGSALAKISDSK--QLIAS-D-DGLFLRDTATGV 120 (326)
T ss_dssp GTEEEEEETTTTEE-E---EEE-CSSCEEEEEEEETTE--EEEEE-T-TEEEEEETTTCC
T ss_pred CCEEEEEECCCCcE-E---EEE-CCCcceEEEEeCCCe--EEEEE-C-CCEEEEECCCCc
Confidence 45677777765432 1 121 234678899999887 56554 3 348888876653
No 225
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=90.63 E-value=0.89 Score=24.94 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=26.2
Q ss_pred cccEeEEEecCCCCc-EEEEEecCCCcEEEEECCC
Q 039404 29 VGGVNDIAFSHPNKQ-LYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 29 ~~~v~~~~~~~~~~~-~~l~s~~~~~~i~~w~~~~ 62 (65)
..+|..+.|||-+.. -.|++-..|+.|++||+..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 467999999996431 0677777899999999975
No 226
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.56 E-value=0.89 Score=22.56 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=32.2
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
++.|..||..++.. . .+ .....+.++++++++. ++++. +..|..||..++
T Consensus 34 ~~~i~~~d~~~~~~-~---~~-~~~~~~~~i~~~~dG~--l~v~~--~~~l~~~d~~~g 83 (297)
T 3g4e_A 34 AKKVCRWDSFTKQV-Q---RV-TMDAPVSSVALRQSGG--YVATI--GTKFCALNWKEQ 83 (297)
T ss_dssp TTEEEEEETTTCCE-E---EE-ECSSCEEEEEEBTTSS--EEEEE--TTEEEEEETTTT
T ss_pred CCEEEEEECCCCcE-E---EE-eCCCceEEEEECCCCC--EEEEE--CCeEEEEECCCC
Confidence 35666777665432 1 12 1245678999999998 66553 567888888765
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.48 E-value=0.92 Score=22.57 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=21.4
Q ss_pred ccEeEEEecCCCCcEEEEEecCC------CcEEEEECC
Q 039404 30 GGVNDIAFSHPNKQLYVITCGDD------KTIKVWDAT 61 (65)
Q Consensus 30 ~~v~~~~~~~~~~~~~l~s~~~~------~~i~~w~~~ 61 (65)
.....++|+|++. .++.+... +.|..|++.
T Consensus 188 ~~p~gl~~spdg~--~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 188 DHPNGLAFSPDEQ--TLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp SSEEEEEECTTSS--EEEEEECCC---CCCEEEEEEEE
T ss_pred CCCcceEEcCCCC--EEEEEecCCcCCCCCEEEEEEec
Confidence 3457899999998 56555443 678888764
No 228
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.93 E-value=1.5 Score=24.67 Aligned_cols=54 Identities=17% Similarity=0.070 Sum_probs=31.8
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
++.+.-||+.+++..-.. ... .+...-.....+. +++.++.|+.++.+|.++|+
T Consensus 452 ~G~l~A~D~~tG~~~W~~-~~~---~~~~~g~~~tagg--~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEK-MER---FAVWGGTMATAGD--LVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CEEEEEECTTTCCEEEEE-EES---SCCCSBCEEETTT--EEEEECTTSEEEEEETTTCC
T ss_pred cCeEEEEECCCCCEEeEe-cCC---CCccCcceEecCC--EEEEECCCCeEEEEECCCCC
Confidence 467888888877633311 111 1111101112355 67778899999999999885
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=88.83 E-value=1.4 Score=22.40 Aligned_cols=57 Identities=16% Similarity=0.074 Sum_probs=34.6
Q ss_pred cCeEEEEECCCCceEeeeEEee----cccccEeEEEecCCCCcEEEEEec---CCCcEEEEECCCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEID----AHVGGVNDIAFSHPNKQLYVITCG---DDKTIKVWDATNG 63 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~s~~---~~~~i~~w~~~~~ 63 (65)
+..|.+||+.++..... ..+. .+......+++++++.. .+++-. .++.|.+||+.++
T Consensus 92 ~~~i~~~d~~tg~~~~~-~~~~~~~~~~~~~~~~v~vd~~~g~-~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRV-IYLPPPITLSNSFVNDLAVDLIHNF-VYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp CCEEEEEETTTTEEEEE-EECCTTTSCTTCCCCEEEEETTTTE-EEEEECCSGGGCEEEEEETTTC
T ss_pred CCeEEEEECCCCeEEEE-EECChhhcccccccceEEEecCCCE-EEEEcCccCCCCeEEEEECCCC
Confidence 46788899876642221 1221 12234578899876552 445544 5788999998765
No 230
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=86.67 E-value=1.7 Score=21.01 Aligned_cols=51 Identities=8% Similarity=-0.018 Sum_probs=31.5
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEEC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDA 60 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~ 60 (65)
++.|..|+... . ... .........+..+.+.+++. ++++...++.+..++.
T Consensus 77 ~~~i~~~~~~g-~-~~~-~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 77 ANKIGRITKKG-I-IKE-YTLPNPDSAPYGITEGPNGD--IWFTEMNGNRIGRITD 127 (299)
T ss_dssp TTEEEEECTTS-C-EEE-EECSSTTCCEEEEEECTTSC--EEEEETTTTEEEEECT
T ss_pred CCeEEEECCCC-c-EEE-EeCCCcCCCceeeEECCCCC--EEEEecCCceEEEECC
Confidence 45566676542 2 111 11222344678899998887 7777666778888876
No 231
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=86.11 E-value=1.9 Score=20.89 Aligned_cols=51 Identities=12% Similarity=0.014 Sum_probs=31.4
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEEC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDA 60 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~ 60 (65)
++.|..|+. ++.... .........+..+++.+++. ++++...++.+..++.
T Consensus 119 ~~~i~~~d~-~g~~~~--~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 119 GNRIGRITD-DGKIRE--YELPNKGSYPSFITLGSDNA--LWFTENQNNAIGRITE 169 (299)
T ss_dssp TTEEEEECT-TCCEEE--EECSSTTCCEEEEEECTTSC--EEEEETTTTEEEEECT
T ss_pred CceEEEECC-CCCEEE--ecCCCCCCCCceEEEcCCCC--EEEEeCCCCEEEEEcC
Confidence 345666666 332111 11222345678899998887 7776666778888877
No 232
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=85.92 E-value=2.3 Score=21.62 Aligned_cols=52 Identities=12% Similarity=0.187 Sum_probs=29.7
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
.++.+.+||..+..... .+..... -..++ +++. .++.+..+..+.++|..+.
T Consensus 105 ~~~~v~v~D~~t~~~~~---ti~~~~e-G~glt--~dg~--~L~~SdGs~~i~~iDp~T~ 156 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQVR---SFNYDGE-GWGLT--HNDQ--YLIMSDGTPVLRFLDPESL 156 (262)
T ss_dssp SSSEEEEEETTTCCEEE---EEECSSC-CCCEE--ECSS--CEEECCSSSEEEEECTTTC
T ss_pred eCCEEEEEECccCcEEE---EEECCCC-ceEEe--cCCC--EEEEECCCCeEEEEcCCCC
Confidence 35678888987755333 3332111 13444 3555 4444444678888888764
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=85.88 E-value=2.2 Score=21.54 Aligned_cols=53 Identities=9% Similarity=0.092 Sum_probs=30.1
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
.++.+.++|..+..... .+...... ...+++++. .++.+..++.+.+.|..+.
T Consensus 84 ~~~~v~viD~~t~~v~~---~i~~g~~~--g~glt~Dg~--~l~vs~gs~~l~viD~~t~ 136 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIK---NFTHQMKD--GWGLATDGK--ILYGSDGTSILYEIDPHTF 136 (266)
T ss_dssp TCSEEEEEETTTTEEEE---EEECCSSS--CCEEEECSS--SEEEECSSSEEEEECTTTC
T ss_pred cCCEEEEEECCCCcEEE---EEECCCCC--eEEEEECCC--EEEEECCCCeEEEEECCCC
Confidence 35678888987654333 33211111 223444666 3444446789999998764
No 234
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=85.74 E-value=3.3 Score=23.28 Aligned_cols=54 Identities=17% Similarity=0.195 Sum_probs=30.9
Q ss_pred eEEEEECCCCceEeeeEEeec-ccccEeEEEecCCCCcEEEEEec-CCCcEEEEECCCC
Q 039404 7 IVQIYPCNGGDEVRQHLEIDA-HVGGVNDIAFSHPNKQLYVITCG-DDKTIKVWDATNG 63 (65)
Q Consensus 7 ~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~~~~ 63 (65)
.+.+||..+.... ....... +.....++++.+++. +++.|+ .+..+.+||..+.
T Consensus 220 ~~~~yd~~t~~w~-~~~~~~~~~~~~~~~~~~~~~g~--lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 220 LTSSWDPSTGIVS-DRTVTVTKHDMFCPGISMDGNGQ--IVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp EEEEECTTTCCBC-CCEEEECSCCCSSCEEEECTTSC--EEEECSSSTTCEEEEEGGGT
T ss_pred EEEEEeCCCCcEE-eCcccCCCCCCccccccCCCCCC--EEEeCCCCCCceEEecCcCC
Confidence 4667887765422 1112221 222233466777888 677766 4568888887654
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=84.58 E-value=3.2 Score=23.67 Aligned_cols=44 Identities=20% Similarity=0.217 Sum_probs=26.8
Q ss_pred ccccCeEEEEECCCCceEeeeEEeecc-cccEeEEEecCCCCcEEEEEe
Q 039404 2 AYSRHIVQIYPCNGGDEVRQHLEIDAH-VGGVNDIAFSHPNKQLYVITC 49 (65)
Q Consensus 2 ~~~~~~i~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~ 49 (65)
++.|+.++.||..+++.+. .++.. .....-+.|..++.+ +++..
T Consensus 492 gt~dg~l~a~D~~tG~~lw---~~~~~~~~~~~p~ty~~~G~q-yv~~~ 536 (689)
T 1yiq_A 492 GSADGRVIAYAADTGEKLW---EQPAASGVMAAPVTYSVDGEQ-YVTFM 536 (689)
T ss_dssp ECTTSEEEEEETTTCCEEE---EEECSSCCCSCCEEEEETTEE-EEEEE
T ss_pred ECCCCcEEEEECCCCccce---eeeCCCCcccCceEEEECCEE-EEEEE
Confidence 4678999999999887554 23322 222234666667775 55543
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=83.95 E-value=3.8 Score=22.63 Aligned_cols=53 Identities=11% Similarity=0.162 Sum_probs=34.0
Q ss_pred CeEEEEECCCCceEeeeEEeec--cccc-EeEEEecCCCCcEEEEEec-------------------CCCcEEEEECCCC
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDA--HVGG-VNDIAFSHPNKQLYVITCG-------------------DDKTIKVWDATNG 63 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~--~~~~-v~~~~~~~~~~~~~l~s~~-------------------~~~~i~~w~~~~~ 63 (65)
+.+.++|..+..... .... .... --.+-|+|+++ .+++.. .+..|.+||+.++
T Consensus 164 g~v~vlD~~T~~v~~---~~~~~~~~~~~~Yd~~~~p~~~--~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 164 GGILMLDHYSFEPLG---KWEIDRGDQYLAYDFWWNLPNE--VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp CEEEEECTTTCCEEE---ECCSBCTTCCCCCCEEEETTTT--EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CeEEEEECCCCeEEE---EEccCCCCccccceEEECCCCC--EEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 568888887654333 2321 1111 12477799999 777764 3689999999765
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=82.16 E-value=3.6 Score=21.00 Aligned_cols=20 Identities=10% Similarity=0.245 Sum_probs=14.8
Q ss_pred EEEEecCCCcEEEEECCCCC
Q 039404 45 YVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 45 ~l~s~~~~~~i~~w~~~~~~ 64 (65)
.++.++.++.+..+|..+|+
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~ 124 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGT 124 (376)
T ss_dssp EEEEEETTSEEEEEETTTCC
T ss_pred EEEEEcCCCEEEEEECCCCC
Confidence 56666677888888887764
No 238
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=82.16 E-value=4 Score=21.56 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=24.9
Q ss_pred cEeEEEecCCCCcEEEEEec-CCCcEEEEECCCC
Q 039404 31 GVNDIAFSHPNKQLYVITCG-DDKTIKVWDATNG 63 (65)
Q Consensus 31 ~v~~~~~~~~~~~~~l~s~~-~~~~i~~w~~~~~ 63 (65)
....+++++++. ++++-. .++.|+.|++.++
T Consensus 324 ~P~gia~d~dG~--lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 324 QPNGMTVDEDGN--FYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp SEEEEEECTTCC--EEEEETTTTCEEEEEETTTT
T ss_pred CCeEEEEeCCCC--EEEEeCCCCCEEEEEECCCC
Confidence 367899999998 777777 7889999996554
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=81.07 E-value=3.8 Score=20.53 Aligned_cols=52 Identities=8% Similarity=-0.011 Sum_probs=30.1
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
.++.+.+||..+..... .+..... -..++ +++.. ++.+ ..++.+.++|..+.
T Consensus 83 ~~~~v~v~D~~tl~~~~---ti~~~~~-Gwglt--~dg~~-L~vS-dgs~~l~~iDp~t~ 134 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRA---RFRYPGE-GWALT--SDDSH-LYMS-DGTAVIRKLDPDTL 134 (243)
T ss_dssp SSSEEEEEETTTTEEEE---EEECSSC-CCEEE--ECSSC-EEEE-CSSSEEEEECTTTC
T ss_pred eCCEEEEEECCcCcEEE---EEeCCCC-ceEEe--eCCCE-EEEE-CCCCeEEEEeCCCC
Confidence 35778889987754333 3332211 13444 35552 4444 45788999998765
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=81.07 E-value=4 Score=20.84 Aligned_cols=53 Identities=4% Similarity=-0.056 Sum_probs=31.5
Q ss_pred ccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 4 SRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 4 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
.++.+.+||..+.+... .+..... -..++ +++. .|+.+..++.+.++|..+.+
T Consensus 114 ~~~~v~V~D~~Tl~~~~---ti~~~~e-GwGLt--~Dg~--~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRER---TTRYSGE-GWGLC--YWNG--KLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp SSCEEEEEETTTTEEEE---EEECSSC-CCCEE--EETT--EEEEECSSSEEEEECTTTCC
T ss_pred cCCEEEEEECCcCcEEE---EEeCCCc-eeEEe--cCCC--EEEEECCCCEEEEEcCCCCe
Confidence 36778889988755333 3332111 13444 3566 45554558899999987653
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=80.92 E-value=3.7 Score=20.30 Aligned_cols=52 Identities=8% Similarity=0.017 Sum_probs=26.6
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
..++.+..+|.. +.... ........+..+...+++. +..++.++.+..+|..
T Consensus 114 t~~~~l~~~d~~-g~~~~---~~~~~~~~~~~~~~~~~g~---l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 114 SMDGHLYAINTD-GTEKW---RFKTKKAIYATPIVSEDGT---IYVGSNDNYLYAINPD 165 (330)
T ss_dssp CTTSEEEEECTT-SCEEE---EEECSSCCCSCCEECTTSC---EEEECTTSEEEEECTT
T ss_pred ecCCEEEEEcCC-CCEEE---EEcCCCceeeeeEEcCCCE---EEEEcCCCEEEEECCC
Confidence 345667777765 33222 1222222334445555555 3445566777777765
No 242
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=80.84 E-value=3.5 Score=19.95 Aligned_cols=52 Identities=12% Similarity=0.027 Sum_probs=32.4
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
++.|.+|+.. +.... ..+......+..+++.+++. ++++...++.|..+|..
T Consensus 40 ~~~v~~~~~~-~~~~~--~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 40 ANKISSLDQS-GRIKE--FEVPTPDAKVMCLIVSSLGD--IWFTENGANKIGKLSKK 91 (300)
T ss_dssp TTEEEEECTT-SCEEE--EECSSTTCCEEEEEECTTSC--EEEEETTTTEEEEECTT
T ss_pred CCeEEEECCC-CceEE--EECCCCCCcceeEEECCCCC--EEEEecCCCeEEEECCC
Confidence 4567777765 32211 12223335678899988888 67666667788888765
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=80.40 E-value=4.3 Score=20.73 Aligned_cols=55 Identities=9% Similarity=0.147 Sum_probs=29.3
Q ss_pred cccCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 3 YSRHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 3 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
..++.|..+|..+++.... ........ ..... .+. .++.++.++.+..+|..+|+
T Consensus 110 ~~~g~l~a~d~~tG~~~W~-~~~~~~~~--~~p~~--~~~--~v~v~~~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 110 SEKAQVYALNTSDGTVAWQ-TKVAGEAL--SRPVV--SDG--LVLIHTSNGQLQALNEADGA 164 (376)
T ss_dssp ETTSEEEEEETTTCCEEEE-EECSSCCC--SCCEE--ETT--EEEEECTTSEEEEEETTTCC
T ss_pred cCCCEEEEEECCCCCEEEE-EeCCCceE--cCCEE--ECC--EEEEEcCCCeEEEEECCCCc
Confidence 4466777888876653321 11111110 11111 133 46666778888888887764
No 244
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=78.77 E-value=6.4 Score=21.81 Aligned_cols=51 Identities=4% Similarity=0.005 Sum_probs=29.8
Q ss_pred cCeEEEEECCCCceEeeeEEeec--ccccEeEEEe--cCCCCcEEEEE-ec-----CCCcEEEEEC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDA--HVGGVNDIAF--SHPNKQLYVIT-CG-----DDKTIKVWDA 60 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~--~~~~~~~~l~s-~~-----~~~~i~~w~~ 60 (65)
+..|.+||+.+++... .+.. .......+.| +|+++ +++. +. .++.|.+|..
T Consensus 227 ~d~V~v~D~~~~k~~~---tI~vg~~g~~P~~i~f~~~Pdg~--~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIH---SLTLGEENRMALELRPLHDPTKL--MGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp CCEEEEEETTTTEEEE---EEESCTTEEEEEEEEECSSTTCC--EEEEEEEEETTTCCEEEEEEEE
T ss_pred CCEEEEEECCCCcEee---EEecCCCCCccceeEeeECCCCC--EEEEEEeeeccCCCceEEEEEe
Confidence 5789999998754322 2322 1122345545 99998 4444 44 6677766543
No 245
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=76.15 E-value=5.9 Score=20.01 Aligned_cols=31 Identities=13% Similarity=-0.046 Sum_probs=22.2
Q ss_pred ccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 30 GGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 30 ~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
.....++|+|++.. ++++...++.|..|++.
T Consensus 179 ~~~~~i~~s~dg~~-lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 179 SIPNSICFSPDGTT-GYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp SSEEEEEECTTSCE-EEEEETTTCEEEEEEBC
T ss_pred cccCCeEEcCCCCE-EEEEECCCCEEEEEEcc
Confidence 34578999999983 33444557889999875
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=74.95 E-value=9.6 Score=21.87 Aligned_cols=52 Identities=13% Similarity=0.079 Sum_probs=32.4
Q ss_pred eEEEEECCC--CceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 7 IVQIYPCNG--GDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 7 ~i~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
.|.+.|..+ +... ...+.. .....++.++|+++. .+++...+..+.++|+.+
T Consensus 255 ~V~VID~~~~~~~~~--~~~Ipv-g~~PhGv~~sPDGk~-v~V~~~~s~~VsVid~~~ 308 (595)
T 1fwx_A 255 GVKVVDGRKEASSLF--TRYIPI-ANNPHGCNMAPDKKH-LCVAGKLSPTVTVLDVTR 308 (595)
T ss_dssp TEEEEECSGGGCCSS--EEEEEE-ESSCCCEEECTTSSE-EEEECTTSSBEEEEEGGG
T ss_pred cEEEEeCcccCCcee--EEEEec-CCCceEEEEcCCCCE-EEEeCCCCCeEEEEECcc
Confidence 377788765 2210 112221 123478999999994 444555788999999874
No 247
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=74.10 E-value=6.9 Score=20.69 Aligned_cols=30 Identities=23% Similarity=0.128 Sum_probs=21.5
Q ss_pred cEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 31 GVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 31 ~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
..+.++|+|+++. ++++-+..+.|..+++.
T Consensus 222 ~pNGia~spDg~~-lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 222 FANGINISPDGKY-VYIAELLAHKIHVYEKH 251 (355)
T ss_dssp SEEEEEECTTSSE-EEEEEGGGTEEEEEEEC
T ss_pred ccCcceECCCCCE-EEEEeCCCCeEEEEEEC
Confidence 4588999999983 34444456788888875
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=67.31 E-value=10 Score=19.00 Aligned_cols=29 Identities=10% Similarity=0.026 Sum_probs=20.3
Q ss_pred EeEEEecCCCCcEEEEEe-cCCCcEEEEECCC
Q 039404 32 VNDIAFSHPNKQLYVITC-GDDKTIKVWDATN 62 (65)
Q Consensus 32 v~~~~~~~~~~~~~l~s~-~~~~~i~~w~~~~ 62 (65)
...+++++++. .++.+ ...+.|..+++..
T Consensus 187 p~gia~~~dg~--~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 187 PGGAEVSADSS--FVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CCEEEECTTSS--EEEEEEGGGTEEEEEESSS
T ss_pred CcceEECCCCC--EEEEEeCCCCeEEEEECCC
Confidence 46789999987 44443 4567888888763
No 249
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=65.83 E-value=17 Score=21.03 Aligned_cols=31 Identities=13% Similarity=0.099 Sum_probs=21.8
Q ss_pred cEeEEEec-CCCCcEEEE-EecCC----CcEEEEECCCC
Q 039404 31 GVNDIAFS-HPNKQLYVI-TCGDD----KTIKVWDATNG 63 (65)
Q Consensus 31 ~v~~~~~~-~~~~~~~l~-s~~~~----~~i~~w~~~~~ 63 (65)
.+...+|+ |++. .++ +...+ ..|.++|+.++
T Consensus 175 ~~~~~~~S~PDG~--~lAy~~~~~G~~~~~l~v~dl~~g 211 (751)
T 2xe4_A 175 DVMEVKPAPPEHD--LVAFSVDMSGNEVYTIEFKRISDP 211 (751)
T ss_dssp EEEEEEECTTTTC--EEEEEEESSSSSCEEEEEEETTCT
T ss_pred EEeeeEecCCCCC--EEEEEEeCCCCceEEEEEEECCCC
Confidence 45678999 9998 554 33322 35999999877
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=64.31 E-value=18 Score=20.74 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=17.7
Q ss_pred EEEEecCCCcEEEEECCCCC
Q 039404 45 YVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 45 ~l~s~~~~~~i~~w~~~~~~ 64 (65)
.++.++.++.+.++|..+|+
T Consensus 329 ~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp EEEECCTTSEEEEEETTTCC
T ss_pred EEEEECCCCEEEEEECCCCC
Confidence 68888999999999998885
No 251
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=56.01 E-value=18 Score=18.17 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=24.9
Q ss_pred EeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 24 EIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 24 ~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
.+.+-...+..++++|+... +++....++.|...|..
T Consensus 21 ~l~g~~~~lSGla~~~~~~~-L~aV~d~~~~I~~ld~~ 57 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNT-LFSTINKPAAIVEMTTN 57 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTE-EEEEEETTEEEEEEETT
T ss_pred ECCCcccCcceeEEeCCCCE-EEEEECCCCeEEEEeCC
Confidence 34455567899999998763 44445567777777765
No 252
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=44.66 E-value=37 Score=18.44 Aligned_cols=51 Identities=10% Similarity=0.013 Sum_probs=26.1
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEEC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDA 60 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~ 60 (65)
-|.+.+||++++......+ + ....|..-+.+.... -++.....|.+..-.+
T Consensus 280 ~G~ihlyDleTgt~i~~nr-I--S~d~iF~ta~~~~~~--Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 280 YGYIHLYDLETGTCIYMNR-I--SGETIFVTAPHEATA--GIIGVNRKGQVLSVCV 330 (365)
T ss_dssp TSEEEEEETTTCCEEEEEE-C--CSSCEEEEEEEGGGT--EEEEEETTCEEEEEEE
T ss_pred CcEEEEEEcccCcEEEEec-c--CCCceEEecccCCCC--cEEEEcCCCEEEEEEE
Confidence 4788999999886544211 1 223443333333333 3444456665554433
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=41.52 E-value=51 Score=19.13 Aligned_cols=32 Identities=6% Similarity=0.175 Sum_probs=21.4
Q ss_pred ccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 30 GGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 30 ~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
..|.++...+++. .+..+..++-+..++..++
T Consensus 406 ~~v~~i~~d~~g~--~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 406 NNIKAVYVDEKKS--LVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp SCEEEEEEETTTT--EEEEEETTTEEEEEETTTC
T ss_pred ccEEEEEEcCCCC--EEEEEeCcCceeEEeCCCC
Confidence 4577777776666 4666666666777877654
No 254
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=39.22 E-value=36 Score=16.67 Aligned_cols=32 Identities=13% Similarity=0.285 Sum_probs=19.5
Q ss_pred EeEEEecCCCCcEEEEEecCCCcEEEEECCCCC
Q 039404 32 VNDIAFSHPNKQLYVITCGDDKTIKVWDATNGV 64 (65)
Q Consensus 32 v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~~ 64 (65)
+..+.|...+.- .+++.+.++.+.++|+.-|+
T Consensus 121 llsl~f~~g~aH-aia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 121 LLSLRFANVQGH-AIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp EEEEEETTTEEE-EEEEEEETTEEEEEETTTEE
T ss_pred EEEEEecCCCce-eEEeccCCCeEEEeCCCCce
Confidence 444566543331 34455678899999987653
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=38.98 E-value=35 Score=16.48 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=20.9
Q ss_pred ccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 30 GGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 30 ~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
.....+++++++.. ++++-...+.|..++...
T Consensus 79 ~~p~~ia~d~~~~~-lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 79 GSPEGIALDHLGRT-IFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp CCEEEEEEETTTTE-EEEEETTTTEEEEEETTS
T ss_pred CCccEEEEEecCCe-EEEEECCCCEEEEEEcCC
Confidence 34578889887652 444545567788777653
No 256
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=37.59 E-value=9 Score=21.47 Aligned_cols=16 Identities=38% Similarity=0.891 Sum_probs=10.5
Q ss_pred EecCCCcEEEEECCCC
Q 039404 48 TCGDDKTIKVWDATNG 63 (65)
Q Consensus 48 s~~~~~~i~~w~~~~~ 63 (65)
.+..+|.|++||++..
T Consensus 162 ~~~~~GVVrvWDVkd~ 177 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNA 177 (577)
T ss_dssp ----CCEECSEECSCG
T ss_pred CCCCCCeEEEEecCCH
Confidence 4456899999999764
No 257
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=32.36 E-value=53 Score=16.62 Aligned_cols=53 Identities=11% Similarity=0.052 Sum_probs=29.8
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
...|+..|+....... .. .......+++|++.+.. ++++-...+.|..+++..
T Consensus 9 ~~~I~~i~~~~~~~~~---~~-~~~~~p~g~~~d~~~~~-ly~~D~~~~~I~~~~~~g 61 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTS---LI-PNLRNVVALDTEVASNR-IYWSDLSQRMICSTQLDR 61 (316)
T ss_dssp BSSEEEEETTSCCCEE---EE-CSCSSEEEEEEETTTTE-EEEEETTTTEEEEEEC--
T ss_pred CCeEEEEECCCcceEe---hh-cCCCceEEEEEEeCCCE-EEEEECCCCcEEEEECCC
Confidence 4567777876543222 12 22345678888876653 444545567777777653
No 258
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=30.01 E-value=85 Score=18.23 Aligned_cols=30 Identities=7% Similarity=-0.138 Sum_probs=17.5
Q ss_pred ccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 30 GGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 30 ~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
..|.++...+++. +.+ +..++-+..++..+
T Consensus 407 ~~v~~i~~d~~g~--lWi-gt~~~Gl~~~~~~~ 436 (781)
T 3v9f_A 407 NSVLCSLKDSEGN--LWF-GTYLGNISYYNTRL 436 (781)
T ss_dssp SBEEEEEECTTSC--EEE-EETTEEEEEECSSS
T ss_pred cceEEEEECCCCC--EEE-EeccCCEEEEcCCC
Confidence 4577777776666 433 44444566666544
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=29.50 E-value=58 Score=16.21 Aligned_cols=29 Identities=10% Similarity=0.027 Sum_probs=19.3
Q ss_pred cEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 31 GVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 31 ~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
....+++++++. ++++-..++.|..+|..
T Consensus 33 ~pegia~~~~g~--lyv~d~~~~~I~~~d~~ 61 (306)
T 2p4o_A 33 FLENLASAPDGT--IFVTNHEVGEIVSITPD 61 (306)
T ss_dssp CEEEEEECTTSC--EEEEETTTTEEEEECTT
T ss_pred CcceEEECCCCC--EEEEeCCCCeEEEECCC
Confidence 456778887776 66665566777777654
No 260
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=27.61 E-value=46 Score=14.40 Aligned_cols=16 Identities=25% Similarity=0.459 Sum_probs=12.2
Q ss_pred CeEEEEECCCCceEee
Q 039404 6 HIVQIYPCNGGDEVRQ 21 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~ 21 (65)
..|.+|+..++..+..
T Consensus 18 E~V~IvNvnNG~Rf~T 33 (96)
T 1vc3_B 18 EQVDIYDITNGARLTT 33 (96)
T ss_dssp CEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCceEEE
Confidence 4688999998876653
No 261
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=26.26 E-value=98 Score=17.73 Aligned_cols=51 Identities=10% Similarity=0.013 Sum_probs=27.5
Q ss_pred cCeEEEEECCCCceEeeeEEeecccccEeEEEecCCCCcEEEEEecCCCcEEEEEC
Q 039404 5 RHIVQIYPCNGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLYVITCGDDKTIKVWDA 60 (65)
Q Consensus 5 ~~~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~ 60 (65)
-|.+.+||++++......+ + ....|..-+...... -++.....|.|..-.+
T Consensus 279 ~G~i~lyDleTgt~i~~nr-I--s~~~iF~t~~~~~~~--Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 279 YGYIHLYDLETGTCIYMNR-I--SGETIFVTAPHEATA--GIIGVNRKGQVLSVCV 329 (494)
T ss_dssp TSEEEEEETTTCCEEEEEE-C--CSSCEEEEEEETTTT--EEEEEETTCEEEEEEE
T ss_pred CceEEEEecccceeeeeec-c--cCCceEEecccCCCC--cEEEEccCceEEEEEE
Confidence 4778999999886544221 1 233444333333333 4555556666654443
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=25.33 E-value=87 Score=16.85 Aligned_cols=30 Identities=17% Similarity=-0.007 Sum_probs=20.0
Q ss_pred cEeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 31 GVNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 31 ~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
.-..++|+|++.. ++++-...+.|..++..
T Consensus 271 ~P~gia~~pdG~~-lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 271 WEFHIQFHPSGNY-AYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCEEEEECTTSSE-EEEEETTTTEEEEEEEE
T ss_pred cceeEEEcCCCCE-EEEEECCCCEEEEEeCC
Confidence 3478999999983 33344456778777653
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=25.03 E-value=84 Score=16.54 Aligned_cols=32 Identities=9% Similarity=-0.022 Sum_probs=20.1
Q ss_pred ccEeEEEecCCCCcEEEEEecCCCcEEEEECCC
Q 039404 30 GGVNDIAFSHPNKQLYVITCGDDKTIKVWDATN 62 (65)
Q Consensus 30 ~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~ 62 (65)
.....++|++.... ++++-...+.|..++...
T Consensus 116 ~~~~gl~~d~~~~~-ly~~D~~~~~I~r~~~~g 147 (386)
T 3v65_B 116 ENAIALDFHHRREL-VFWSDVTLDRILRANLNG 147 (386)
T ss_dssp SCEEEEEEETTTTE-EEEEETTTTEEEEEETTS
T ss_pred CccEEEEEecCCCe-EEEEeCCCCcEEEEecCC
Confidence 34678888876553 444544566777777654
No 264
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=24.82 E-value=58 Score=14.58 Aligned_cols=16 Identities=25% Similarity=0.420 Sum_probs=12.2
Q ss_pred CeEEEEECCCCceEee
Q 039404 6 HIVQIYPCNGGDEVRQ 21 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~ 21 (65)
..|.+|+..++..+..
T Consensus 45 E~V~I~NvnNG~Rf~T 60 (114)
T 3oug_A 45 EKVQVVNLNNGERLET 60 (114)
T ss_dssp BEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCceEEE
Confidence 4688999998876653
No 265
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=24.50 E-value=65 Score=15.05 Aligned_cols=16 Identities=13% Similarity=0.399 Sum_probs=12.2
Q ss_pred CeEEEEECCCCceEee
Q 039404 6 HIVQIYPCNGGDEVRQ 21 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~ 21 (65)
..|.||+..++..+..
T Consensus 59 EkV~IvNvnNG~RfeT 74 (143)
T 1pqh_A 59 EAIDIWNVTNGKRFST 74 (143)
T ss_dssp CEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCceEEE
Confidence 4688999998876653
No 266
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=23.04 E-value=69 Score=14.87 Aligned_cols=16 Identities=19% Similarity=0.254 Sum_probs=12.0
Q ss_pred CeEEEEECCCCceEee
Q 039404 6 HIVQIYPCNGGDEVRQ 21 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~ 21 (65)
..|.+|+..++..+..
T Consensus 42 EkV~IvNvnNG~RfeT 57 (139)
T 2c45_A 42 EQVTIVDIDNGARLVT 57 (139)
T ss_dssp CCEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCceEEE
Confidence 4688999988876653
No 267
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=22.26 E-value=1.3e+02 Score=17.87 Aligned_cols=29 Identities=10% Similarity=0.004 Sum_probs=21.8
Q ss_pred EeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 32 VNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 32 v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
-.++..+|++.. .++++-.+.++.+++++
T Consensus 325 PHGv~vsPDGky-i~v~GKLsptvtV~d~~ 353 (638)
T 3sbq_A 325 PHGCNTSSDGKY-FIAAGKLSPTCSMIAID 353 (638)
T ss_dssp CCCEEECTTSCE-EEEECTTSSBEEEEEGG
T ss_pred CcceeeCCCCCE-EEEcCCCCCeEEEEEee
Confidence 367899999993 34445578899998876
No 268
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=22.13 E-value=1e+02 Score=16.39 Aligned_cols=19 Identities=21% Similarity=0.337 Sum_probs=10.3
Q ss_pred EEEEecCCCcEEEEECCCC
Q 039404 45 YVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 45 ~l~s~~~~~~i~~w~~~~~ 63 (65)
.++.++.|+.+.-.|..+|
T Consensus 12 ~V~v~t~dG~l~Ald~~tG 30 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNG 30 (339)
T ss_dssp EEEEEETTSCEEEEETTTT
T ss_pred EEEEEeCCCeEEEEECCCC
Confidence 3444555666555555554
No 269
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=21.71 E-value=1e+02 Score=16.45 Aligned_cols=28 Identities=18% Similarity=0.444 Sum_probs=22.3
Q ss_pred EeEEEecCCCCcEEEEEecCCCcEEEEECC
Q 039404 32 VNDIAFSHPNKQLYVITCGDDKTIKVWDAT 61 (65)
Q Consensus 32 v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~ 61 (65)
...++++|++. .|+.....+.+.-+|+.
T Consensus 187 ~nGIv~~pdg~--~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 187 YSGITFDPHSN--KLIAFGGPRALTAFDVS 214 (334)
T ss_dssp CSEEEEETTTT--EEEEESSSSSEEEEECS
T ss_pred cceEEEeCCCC--EEEEEcCCCeEEEEcCC
Confidence 46899999998 66666558999888865
No 270
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=21.27 E-value=66 Score=13.96 Aligned_cols=28 Identities=21% Similarity=0.129 Sum_probs=16.5
Q ss_pred CeEEEEECCCCceEeeeEEeecccccEeE
Q 039404 6 HIVQIYPCNGGDEVRQHLEIDAHVGGVND 34 (65)
Q Consensus 6 ~~i~i~~~~~~~~~~~~~~~~~~~~~v~~ 34 (65)
..|.+|+..++..+... .+.+.++.+.+
T Consensus 17 E~V~IvNvnNG~RfeTY-vI~GerSG~I~ 44 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTY-VILGKKRGEIC 44 (97)
T ss_dssp CEEEEEETTTCCEEEEE-CEEECSTTCEE
T ss_pred CEEEEEECCCCceEEEE-EEeeccCCeEE
Confidence 46889999988765532 23333344443
No 271
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=21.16 E-value=1.1e+02 Score=16.32 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=23.1
Q ss_pred ccEeEEEecCCCCcEEEEEecCCCcEEEEECCCC
Q 039404 30 GGVNDIAFSHPNKQLYVITCGDDKTIKVWDATNG 63 (65)
Q Consensus 30 ~~v~~~~~~~~~~~~~l~s~~~~~~i~~w~~~~~ 63 (65)
..-+.++|.|++. ++++--..+.|..++...+
T Consensus 32 ~~P~~ia~~pdG~--llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 32 NSPWGLAPLPGGD--LLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp SSEEEEEECTTSC--EEEEETTTCEEEEECTTTC
T ss_pred CCceEEEEcCCCc--EEEEEecCCEEEEEECCCC
Confidence 4558999999998 6666544788888765433
No 272
>3u12_A USP37 protein; structural genomics, PH-domain, hydrolase, structural genomi consortium, SGC; 2.08A {Homo sapiens}
Probab=20.12 E-value=43 Score=15.57 Aligned_cols=12 Identities=17% Similarity=0.404 Sum_probs=9.3
Q ss_pred CCcEEEEECCCC
Q 039404 52 DKTIKVWDATNG 63 (65)
Q Consensus 52 ~~~i~~w~~~~~ 63 (65)
.|.|++|+-++|
T Consensus 23 hG~Vqiws~~tG 34 (141)
T 3u12_A 23 HGPIRIRSMQTG 34 (141)
T ss_dssp EEEEEEEETTTE
T ss_pred ceeEEEEecCCC
Confidence 358999988776
Done!