Query 039405
Match_columns 100
No_of_seqs 118 out of 644
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 15:53:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039405.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039405hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1unda_ a.14.1.1 (A:) Advillin 63.3 1.2 8.6E-05 23.5 0.9 18 55-72 1-18 (36)
2 d1nn7a_ d.42.1.2 (A:) Potassiu 60.0 1 7.3E-05 28.0 0.3 57 37-98 2-59 (105)
3 d1b0aa2 c.58.1.2 (A:2-122) Tet 55.3 20 0.0014 22.1 7.6 54 33-99 32-87 (121)
4 d2bkfa1 d.15.2.2 (A:1-85) Next 52.5 20 0.0015 21.5 5.7 54 37-93 7-68 (85)
5 d1z3xa2 a.261.1.1 (A:88-235) G 49.9 0.3 2.2E-05 33.0 -3.8 29 30-61 118-146 (148)
6 d1y6ia2 a.261.1.1 (A:83-233) M 49.5 0.6 4.3E-05 31.6 -2.3 31 30-63 118-148 (151)
7 d1yu5x1 a.14.1.1 (X:10-76) Vil 42.3 3.9 0.00028 24.0 0.9 19 54-72 31-49 (67)
8 d1tjya_ c.93.1.1 (A:) AI-2 rec 40.0 15 0.0011 23.7 3.8 31 45-75 2-35 (316)
9 d3kvta_ d.42.1.2 (A:) akv3.1 v 35.9 4.2 0.0003 24.8 0.3 57 36-98 3-62 (103)
10 d1ujsa_ a.14.1.1 (A:) Actin-bi 35.5 6.1 0.00044 24.3 1.1 20 54-73 46-65 (88)
11 d1qzpa_ a.14.1.1 (A:) Dematin 33.5 4.4 0.00032 23.9 0.1 19 54-72 32-50 (68)
12 d1yu8x1 a.14.1.1 (X:42-76) Vil 31.2 7.6 0.00056 19.9 0.9 17 56-72 1-17 (35)
13 d2al3a1 d.15.1.2 (A:10-85) Tet 30.5 38 0.0027 19.9 4.2 35 45-81 9-43 (76)
14 d1y74b1 a.194.1.1 (B:83-132) P 30.4 8 0.00058 21.5 0.9 20 54-73 26-49 (50)
15 d1a4ia2 c.58.1.2 (A:2-126) Tet 30.2 56 0.004 20.0 5.6 54 33-99 34-89 (125)
16 d1qusa_ d.2.1.6 (A:) 36 kDa so 30.0 15 0.0011 26.9 2.6 25 53-77 13-37 (322)
17 d2r85a1 c.30.1.8 (A:1-99) 5-fo 26.2 0.49 3.6E-05 30.2 -5.6 24 30-53 65-88 (99)
18 d1t1da_ d.42.1.2 (A:) Shaker p 25.3 7.9 0.00058 23.4 0.3 56 37-98 3-61 (100)
19 d1ip9a_ d.15.2.2 (A:) Bud emer 25.1 59 0.0043 18.6 6.9 54 33-91 11-72 (85)
20 d3buxb3 d.93.1.1 (B:264-351) C 23.3 17 0.0012 22.1 1.6 36 34-72 37-73 (88)
21 d1mlaa1 c.19.1.1 (A:3-127,A:19 21.7 13 0.00092 25.1 0.8 20 56-75 22-41 (235)
22 d1whza_ d.50.3.2 (A:) Hypothet 20.8 68 0.0049 17.7 4.1 34 34-68 25-60 (70)
23 d2pbza1 c.30.1.8 (A:4-99) 5-fo 20.7 0.75 5.5E-05 29.2 -5.5 24 29-52 59-82 (96)
24 d1t2da2 d.162.1.1 (A:151-315) 20.2 64 0.0047 19.9 4.1 32 37-71 126-157 (165)
No 1
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.35 E-value=1.2 Score=23.46 Aligned_cols=18 Identities=22% Similarity=0.479 Sum_probs=16.8
Q ss_pred CCCcHHHHHHHHhhhhhc
Q 039405 55 LLSQPSFQELLSKAEDEF 72 (100)
Q Consensus 55 ~L~hP~F~~LL~~aeEEf 72 (100)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999997
No 2
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=59.97 E-value=1 Score=27.97 Aligned_cols=57 Identities=19% Similarity=0.247 Sum_probs=39.5
Q ss_pred EEEEecCCCeeEEEEeccCC-CcHHHHHHHHhhhhhcCCccCCCceeeeCcHHHHHHHHHhhc
Q 039405 37 LAVYVGESQKKRFVIPASLL-SQPSFQELLSKAEDEFGFNHPMGGLTIPCREDTFINLTSSLS 98 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L-~hP~F~~LL~~aeEEfG~~~~~G~L~iPC~~~~F~~vl~~l~ 98 (100)
+.+-||. ++|.+..+-| ++|.. +|.+.....-++.+.|.+-|--|...|++|+..+.
T Consensus 2 I~LNVGG---~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR 59 (105)
T d1nn7a_ 2 IVLNVSG---TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYR 59 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 5677885 9999988866 45531 12233333334445589999999999999998775
No 3
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=55.32 E-value=20 Score=22.12 Aligned_cols=54 Identities=26% Similarity=0.423 Sum_probs=40.3
Q ss_pred CCceEEEEecCCCeeEEEEeccCCCcHHHHHHHHhhhhhcCCccCCCceeee--CcHHHHHHHHHhhcc
Q 039405 33 PKGYLAVYVGESQKKRFVIPASLLSQPSFQELLSKAEDEFGFNHPMGGLTIP--CREDTFINLTSSLSA 99 (100)
Q Consensus 33 pkG~~aVyVG~~e~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~iP--C~~~~F~~vl~~l~~ 99 (100)
+.+...|+||+ +. ..-.....-.++.++.|+... .+.+| |+...+...+..|+.
T Consensus 32 ~P~LavI~vg~-d~----------aS~~Yv~~k~k~a~~lGi~~~--~~~l~~~~t~~~l~~~I~~lN~ 87 (121)
T d1b0aa2 32 APGLAVVLVGS-NP----------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDTLNA 87 (121)
T ss_dssp CCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHHHHT
T ss_pred CceEEEEEeCC-Ch----------hHHHHHHHHHHHHHhhcccee--eeeccccccHHHHHHHHHHHhC
Confidence 45888999998 11 011366777889999999876 57776 788899999888864
No 4
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.54 E-value=20 Score=21.48 Aligned_cols=54 Identities=11% Similarity=0.235 Sum_probs=38.9
Q ss_pred EEEEecCCCeeEEEEeccCCCcHHHHHHHHhhhhhcCC--------ccCCCceeeeCcHHHHHHH
Q 039405 37 LAVYVGESQKKRFVIPASLLSQPSFQELLSKAEDEFGF--------NHPMGGLTIPCREDTFINL 93 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L~hP~F~~LL~~aeEEfG~--------~~~~G~L~iPC~~~~F~~v 93 (100)
+-|..|+ +..||.++.. +++.|.+|..+-+.-||. +.++--++|.|+++.=|.+
T Consensus 7 vKvtf~~-dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~~ 68 (85)
T d2bkfa1 7 LNVTFKN-EIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEAL 68 (85)
T ss_dssp EEEEETT-EEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHHH
T ss_pred EEEEECC-ceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHHH
Confidence 4455565 8999998543 467899999999998885 2333468899998865553
No 5
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=49.86 E-value=0.3 Score=33.03 Aligned_cols=29 Identities=24% Similarity=0.462 Sum_probs=18.9
Q ss_pred CCCCCceEEEEecCCCeeEEEEeccCCCcHHH
Q 039405 30 KDVPKGYLAVYVGESQKKRFVIPASLLSQPSF 61 (100)
Q Consensus 30 ~~vpkG~~aVyVG~~e~~RfvVp~~~L~hP~F 61 (100)
..+|+||+|+.- ..+-..|=-..|+||.|
T Consensus 118 l~AP~GHLP~~~---~lrg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 118 LSAPRGHLPLTN---QLRGVQVLNALLNHPAW 146 (148)
T ss_dssp TTSCTTCCSCCC---CTTCSHHHHHHHTCGGG
T ss_pred CCCCCCCCCcCC---ccchHHHHHHHhcCccc
Confidence 468999999753 23334444567778765
No 6
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=49.50 E-value=0.6 Score=31.59 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=19.3
Q ss_pred CCCCCceEEEEecCCCeeEEEEeccCCCcHHHHH
Q 039405 30 KDVPKGYLAVYVGESQKKRFVIPASLLSQPSFQE 63 (100)
Q Consensus 30 ~~vpkG~~aVyVG~~e~~RfvVp~~~L~hP~F~~ 63 (100)
..+|+||+|+.-.- ..-| +--+.|+||.|.+
T Consensus 118 l~AP~GHLP~~~~l-rG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQL-RGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCT-TCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchh-hhHH--HHHHHHcCcchhh
Confidence 46899999985421 1111 3335788998864
No 7
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=42.31 E-value=3.9 Score=24.01 Aligned_cols=19 Identities=21% Similarity=0.455 Sum_probs=18.0
Q ss_pred cCCCcHHHHHHHHhhhhhc
Q 039405 54 SLLSQPSFQELLSKAEDEF 72 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEf 72 (100)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 6999999999999999998
No 8
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=39.97 E-value=15 Score=23.69 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=24.2
Q ss_pred CeeEEEEeccCCCcHHHHHHHH---hhhhhcCCc
Q 039405 45 QKKRFVIPASLLSQPSFQELLS---KAEDEFGFN 75 (100)
Q Consensus 45 e~~RfvVp~~~L~hP~F~~LL~---~aeEEfG~~ 75 (100)
..+|..+=+..+++|.|+.+.+ ++.+++||+
T Consensus 2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3577888889999999998855 556778875
No 9
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=35.91 E-value=4.2 Score=24.77 Aligned_cols=57 Identities=14% Similarity=0.244 Sum_probs=39.9
Q ss_pred eEEEEecCCCeeEEEEeccCCCc-H--HHHHHHHhhhhhcCCccCCCceeeeCcHHHHHHHHHhhc
Q 039405 36 YLAVYVGESQKKRFVIPASLLSQ-P--SFQELLSKAEDEFGFNHPMGGLTIPCREDTFINLTSSLS 98 (100)
Q Consensus 36 ~~aVyVG~~e~~RfvVp~~~L~h-P--~F~~LL~~aeEEfG~~~~~G~L~iPC~~~~F~~vl~~l~ 98 (100)
.+.+=||. ++|.+..+-|.. | .|..+ ++....++.+.|.+-|--+...|++||..+.
T Consensus 3 rI~LNVGG---~~F~t~~~tL~~~~~s~l~~~---~~~~~~~~~~~~~~fiDRdp~~F~~IL~ylR 62 (103)
T d3kvta_ 3 RVIINVGG---IRHETYKATLKKIPATRLSRL---TEGMLNYDPVLNEYFFDRHPGVFAQIINYYR 62 (103)
T ss_dssp EEEEEETT---EEEEEEHHHHTTSCSSTTTTC---CTTSTTEETTTTEEEECSCTTTHHHHHHHHH
T ss_pred EEEEEECC---EEEEEeHHHHhhCccchhHHH---HcCCCccCCCCCcEEecCCHHHHHHHHHHHc
Confidence 45667885 999998887653 4 23222 2333445555589999999999999998775
No 10
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.49 E-value=6.1 Score=24.34 Aligned_cols=20 Identities=30% Similarity=0.424 Sum_probs=18.5
Q ss_pred cCCCcHHHHHHHHhhhhhcC
Q 039405 54 SLLSQPSFQELLSKAEDEFG 73 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEfG 73 (100)
.||+.-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 11
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.46 E-value=4.4 Score=23.86 Aligned_cols=19 Identities=26% Similarity=0.508 Sum_probs=18.0
Q ss_pred cCCCcHHHHHHHHhhhhhc
Q 039405 54 SLLSQPSFQELLSKAEDEF 72 (100)
Q Consensus 54 ~~L~hP~F~~LL~~aeEEf 72 (100)
.||+.-.|++++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999998
No 12
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.24 E-value=7.6 Score=19.94 Aligned_cols=17 Identities=24% Similarity=0.528 Sum_probs=14.3
Q ss_pred CCcHHHHHHHHhhhhhc
Q 039405 56 LSQPSFQELLSKAEDEF 72 (100)
Q Consensus 56 L~hP~F~~LL~~aeEEf 72 (100)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56678999999999987
No 13
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.54 E-value=38 Score=19.87 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=26.8
Q ss_pred CeeEEEEeccCCCcHHHHHHHHhhhhhcCCccCCCce
Q 039405 45 QKKRFVIPASLLSQPSFQELLSKAEDEFGFNHPMGGL 81 (100)
Q Consensus 45 e~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L 81 (100)
..+|..|+++= .-...+.|++|.+.|||+.+...|
T Consensus 9 ~~rR~~VKvtP--~t~l~~VL~eaC~k~~~~~~~~~L 43 (76)
T d2al3a1 9 NGRRHTVKVTP--STVLLQVLEDTCRRQDFNPSEYDL 43 (76)
T ss_dssp TSCEEEECCCT--TSBHHHHHHHHHHHTTCCGGGCEE
T ss_pred CCcEEEEEeCC--CcCHHHHHHHHHHHhCCChhHcee
Confidence 57899998853 336889999999999998664444
No 14
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.42 E-value=8 Score=21.46 Aligned_cols=20 Identities=35% Similarity=0.693 Sum_probs=14.6
Q ss_pred cCCCcHHHHHHHHh----hhhhcC
Q 039405 54 SLLSQPSFQELLSK----AEDEFG 73 (100)
Q Consensus 54 ~~L~hP~F~~LL~~----aeEEfG 73 (100)
..|+.|.|++||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 35788999999974 455555
No 15
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.17 E-value=56 Score=19.95 Aligned_cols=54 Identities=19% Similarity=0.348 Sum_probs=38.8
Q ss_pred CCceEEEEecCCCeeEEEEeccCCCcHHHHHHHHhhhhhcCCccCCCceeee--CcHHHHHHHHHhhcc
Q 039405 33 PKGYLAVYVGESQKKRFVIPASLLSQPSFQELLSKAEDEFGFNHPMGGLTIP--CREDTFINLTSSLSA 99 (100)
Q Consensus 33 pkG~~aVyVG~~e~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~iP--C~~~~F~~vl~~l~~ 99 (100)
+-+...|+||+ +. ..-.....-.++.++.|.... .+.+| ++.+.+...+..|+.
T Consensus 34 ~P~LavIlvg~-d~----------aS~~Yv~~k~k~a~~~Gi~~~--~~~l~~~~~e~el~~~I~~lN~ 89 (125)
T d1a4ia2 34 TPRLAILQVGN-RD----------DSNLYINVKLKAAEEIGIKAT--HIKLPRTTTESEVMKYITSLNE 89 (125)
T ss_dssp CCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHHHHH
T ss_pred CceEEEEEcCC-Ch----------hHHHHHHHHHHHHHhccceEE--EEecCcchhHHHHHHHHHHHhc
Confidence 34578899997 21 112356678889999999865 67888 667788888887764
No 16
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=29.99 E-value=15 Score=26.91 Aligned_cols=25 Identities=20% Similarity=0.526 Sum_probs=22.4
Q ss_pred ccCCCcHHHHHHHHhhhhhcCCccC
Q 039405 53 ASLLSQPSFQELLSKAEDEFGFNHP 77 (100)
Q Consensus 53 ~~~L~hP~F~~LL~~aeEEfG~~~~ 77 (100)
-+|.+||-+++++++..+++||+.+
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~~ 37 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDRQ 37 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCHH
Confidence 3699999999999999999999864
No 17
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=26.19 E-value=0.49 Score=30.21 Aligned_cols=24 Identities=21% Similarity=0.331 Sum_probs=16.5
Q ss_pred CCCCCceEEEEecCCCeeEEEEec
Q 039405 30 KDVPKGYLAVYVGESQKKRFVIPA 53 (100)
Q Consensus 30 ~~vpkG~~aVyVG~~e~~RfvVp~ 53 (100)
--+|.|.|++|+|-+.-+.|-||+
T Consensus 65 I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 65 VVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp EECCCTTHHHHHCHHHHHTCCSCB
T ss_pred EEecCCCEEEEEcHHHHhcCCCCc
Confidence 468999999999962123366653
No 18
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=25.33 E-value=7.9 Score=23.41 Aligned_cols=56 Identities=13% Similarity=0.108 Sum_probs=37.9
Q ss_pred EEEEecCCCeeEEEEeccCCCc-H--HHHHHHHhhhhhcCCccCCCceeeeCcHHHHHHHHHhhc
Q 039405 37 LAVYVGESQKKRFVIPASLLSQ-P--SFQELLSKAEDEFGFNHPMGGLTIPCREDTFINLTSSLS 98 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L~h-P--~F~~LL~~aeEEfG~~~~~G~L~iPC~~~~F~~vl~~l~ 98 (100)
+.+-||. ++|.+..+-|.. | .+..|... .-.++.+.|.+-|--|...|++||.-+.
T Consensus 3 I~LNVGG---~~f~t~~~tL~~~p~s~l~~l~~~---~~~~~~~~g~~FiDRdp~~F~~IL~flR 61 (100)
T d1t1da_ 3 VVINVSG---LRFETQLKTLNQFPDTLLGNPQKR---NRYYDPLRNEYFFDRNRPSFDAILYFYQ 61 (100)
T ss_dssp EEEEETT---EEEEEEHHHHHTSTTSTTTCHHHH---GGGEETTTTEEEECSCSTTHHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhhCCCchhHHHHhC---CCcCCCCCCeEEEecCHHHHHHHHHHHh
Confidence 4567885 899998766543 3 33333321 1123445589999999999999998775
No 19
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.07 E-value=59 Score=18.58 Aligned_cols=54 Identities=13% Similarity=0.152 Sum_probs=37.2
Q ss_pred CCceEEEEecCCCeeEEEEeccCCCcHHHHHHHHhhhhhcCC-------c-cCCCceeeeCcHHHHH
Q 039405 33 PKGYLAVYVGESQKKRFVIPASLLSQPSFQELLSKAEDEFGF-------N-HPMGGLTIPCREDTFI 91 (100)
Q Consensus 33 pkG~~aVyVG~~e~~RfvVp~~~L~hP~F~~LL~~aeEEfG~-------~-~~~G~L~iPC~~~~F~ 91 (100)
..=-+-++.++ +..||.||.+ ..|.+|.++-++-|+- . .++..++|-|+.+.=+
T Consensus 11 ~~ikVKv~~~~-D~~~~~l~~~----it~~dL~~kI~~rf~~~~~~lkY~Dedgd~v~i~sD~Dl~~ 72 (85)
T d1ip9a_ 11 KTTKIKFYYKD-DIFALMLKGD----TTYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQVSN 72 (85)
T ss_dssp CCEEEEECBTT-CCEEEEECSC----CCHHHHHHHHHHHHTSSCEEEEECCSSSCCSCCCSHHHHHH
T ss_pred CCEEEEEEECC-cEEEEEeCCC----CCHHHHHHHHHHHhCCCceEEEEEcCCCCEEEEeCHHHHHH
Confidence 33344555576 8999999854 4489999998888872 2 2234578889887644
No 20
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.33 E-value=17 Score=22.12 Aligned_cols=36 Identities=25% Similarity=0.422 Sum_probs=24.9
Q ss_pred CceEEE-EecCCCeeEEEEeccCCCcHHHHHHHHhhhhhc
Q 039405 34 KGYLAV-YVGESQKKRFVIPASLLSQPSFQELLSKAEDEF 72 (100)
Q Consensus 34 kG~~aV-yVG~~e~~RfvVp~~~L~hP~F~~LL~~aeEEf 72 (100)
-|.-|+ ||.. +. =++-+-=.|.|++|+|++-++|-|
T Consensus 37 lGQWAIGyvt~-dg--~IlQTIp~nk~L~qaLidG~reGf 73 (88)
T d3buxb3 37 LGQWAIGYVTA-DG--NILQTIPHNKPLFQALIDGFREGF 73 (88)
T ss_dssp TTSEEEEEECT-TS--CEEEECCSSCCHHHHHHHHHHHTS
T ss_pred ccceeeeeecc-CC--ceeeeccCccHHHHHHHhccccee
Confidence 344443 7765 32 245555689999999999999976
No 21
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=21.73 E-value=13 Score=25.06 Aligned_cols=20 Identities=25% Similarity=0.529 Sum_probs=17.7
Q ss_pred CCcHHHHHHHHhhhhhcCCc
Q 039405 56 LSQPSFQELLSKAEDEFGFN 75 (100)
Q Consensus 56 L~hP~F~~LL~~aeEEfG~~ 75 (100)
-++|.|++.++++.+.+|++
T Consensus 22 ~~~p~~r~~~~~~~~~l~~~ 41 (235)
T d1mlaa1 22 ASYPIVEETFAEASAALGYD 41 (235)
T ss_dssp HHCHHHHHHHHHHHHHHTSC
T ss_pred HCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999875
No 22
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=20.83 E-value=68 Score=17.73 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=23.8
Q ss_pred CceEEEEecCCCeeEEEEecc--CCCcHHHHHHHHhh
Q 039405 34 KGYLAVYVGESQKKRFVIPAS--LLSQPSFQELLSKA 68 (100)
Q Consensus 34 kG~~aVyVG~~e~~RfvVp~~--~L~hP~F~~LL~~a 68 (100)
+|-...|.-. +.++.+||.. -|.-...+..|++|
T Consensus 25 kGSH~~~~~~-~~~~~~v~~~~kei~~gtl~~Ilkqa 60 (70)
T d1whza_ 25 KGGHRLYTHP-DGRIVVVPFHSGELPKGTFKRILRDA 60 (70)
T ss_dssp ETTEEEEECT-TSCEEEEECSSSSCCHHHHHHHHHHT
T ss_pred CCceeEEEcC-CCCEEEcCCCCCccCHHHHHHHHHHh
Confidence 4666777754 5666777764 36667788888887
No 23
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=20.66 E-value=0.75 Score=29.18 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=16.3
Q ss_pred CCCCCCceEEEEecCCCeeEEEEe
Q 039405 29 SKDVPKGYLAVYVGESQKKRFVIP 52 (100)
Q Consensus 29 ~~~vpkG~~aVyVG~~e~~RfvVp 52 (100)
.--+|.|.|++|+|-+.-+.+.||
T Consensus 59 aI~IPhgSfv~Y~G~~~ie~~~VP 82 (96)
T d2pbza1 59 GIVVPHGSFVAYLGIEAIEKAKAR 82 (96)
T ss_dssp SBCCCBTTHHHHSCHHHHHTCCSC
T ss_pred eEEEcCCCEEEEecHHHHhhCCCC
Confidence 457899999999996222334444
No 24
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=20.23 E-value=64 Score=19.89 Aligned_cols=32 Identities=22% Similarity=0.200 Sum_probs=21.8
Q ss_pred EEEEecCCCeeEEEEeccCCCcHHHHHHHHhhhhh
Q 039405 37 LAVYVGESQKKRFVIPASLLSQPSFQELLSKAEDE 71 (100)
Q Consensus 37 ~aVyVG~~e~~RfvVp~~~L~hP~F~~LL~~aeEE 71 (100)
+||-+|. +.-.-++++. |+ +.=+++|++|++|
T Consensus 126 ~Pv~lg~-~Gv~~i~~l~-L~-~~E~~~L~~s~~~ 157 (165)
T d1t2da2 126 TPVVLGA-NGVEQVIELQ-LN-SEEKAKFDEAIAE 157 (165)
T ss_dssp EEEEEET-TEEEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred eeEEEcC-CceEEEeCCC-CC-HHHHHHHHHHHHH
Confidence 3455576 5556677776 65 6678888888776
Done!