BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039406
(243 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 133 bits (334), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 112/194 (57%), Gaps = 27/194 (13%)
Query: 76 QSPGLSLGFSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGVLPNG--------KE-- 125
+ P + LG K F+ EL A+D FS+ N+L + GFG V++G L +G KE
Sbjct: 16 EDPEVHLGQLKR-FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEER 74
Query: 126 ---GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK--GQP 180
GE +FQ EVE+IS H++L+ L G+ ++R+LVY ++ N ++ L + QP
Sbjct: 75 XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 181 TMDWPTRIKIALGSAKGLAYLHDDL-----------ANILLDFKFEAKVADFGLAKIASD 229
+DWP R +IALGSA+GLAYLHD ANILLD +FEA V DFGLAK+
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 230 VNTHVSTRVMGTFG 243
+ HV V GT G
Sbjct: 195 KDXHVXXAVRGTIG 208
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 110/194 (56%), Gaps = 27/194 (13%)
Query: 76 QSPGLSLGFSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGVLPNG--------KE-- 125
+ P + LG K F+ EL A+D F + N+L + GFG V++G L +G KE
Sbjct: 8 EDPEVHLGQLKR-FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEER 66
Query: 126 ---GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK--GQP 180
GE +FQ EVE+IS H++L+ L G+ ++R+LVY ++ N ++ L + QP
Sbjct: 67 TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 181 TMDWPTRIKIALGSAKGLAYLHDDL-----------ANILLDFKFEAKVADFGLAKIASD 229
+DWP R +IALGSA+GLAYLHD ANILLD +FEA V DFGLAK+
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 230 VNTHVSTRVMGTFG 243
+ HV V G G
Sbjct: 187 KDXHVXXAVRGXIG 200
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 31/185 (16%)
Query: 88 TFTYEELARATDGFSD------ANLLRQDGFGYVHRGVLPNG---------------KEG 126
+F++ EL T+ F + N + + GFG V++G + N +E
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-KGQPTMDWP 185
+++F E++++++ H++LV L+G+ + G LVY ++ N +L+ L G P + W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 186 TRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLAKIASD-VNTHVST 236
R KIA G+A G+ +LH++ ANILLD F AK++DFGLA+ + T + +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 237 RVMGT 241
R++GT
Sbjct: 194 RIVGT 198
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 31/185 (16%)
Query: 88 TFTYEELARATDGFSD------ANLLRQDGFGYVHRGVLPNG---------------KEG 126
+F++ EL T+ F + N + + GFG V++G + N +E
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-KGQPTMDWP 185
+++F E++++++ H++LV L+G+ + G LVY ++ N +L+ L G P + W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 186 TRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLAKIASD-VNTHVST 236
R KIA G+A G+ +LH++ ANILLD F AK++DFGLA+ + T +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 237 RVMGT 241
R++GT
Sbjct: 194 RIVGT 198
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 23/174 (13%)
Query: 93 ELARATDGFSDANLLRQDGFGYVHRGVL------------PNGKEGEREFQAEVEIISRV 140
+L AT+ F L+ FG V++GVL P +G EF+ E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 141 HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPT--MDWPTRIKIALGSAKGL 198
H HLVSL+G+ ++ +L+Y+++ N L HL+G PT M W R++I +G+A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 199 AYLHD--------DLANILLDFKFEAKVADFGLAKIASDVN-THVSTRVMGTFG 243
YLH NILLD F K+ DFG++K ++++ TH+ V GT G
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 23/174 (13%)
Query: 93 ELARATDGFSDANLLRQDGFGYVHRGVL------------PNGKEGEREFQAEVEIISRV 140
+L AT+ F L+ FG V++GVL P +G EF+ E+E +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 141 HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPT--MDWPTRIKIALGSAKGL 198
H HLVSL+G+ ++ +L+Y+++ N L HL+G PT M W R++I +G+A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 199 AYLHD--------DLANILLDFKFEAKVADFGLAKIASDV-NTHVSTRVMGTFG 243
YLH NILLD F K+ DFG++K +++ TH+ V GT G
Sbjct: 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 31/185 (16%)
Query: 88 TFTYEELARATDGFSD------ANLLRQDGFGYVHRGVLPNG---------------KEG 126
+F++ EL T+ F + N + + GFG V++G + N +E
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 67
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-KGQPTMDWP 185
+++F E++++++ H++LV L+G+ + G LVY ++ N +L+ L G P + W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 186 TRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLAKIASDVNTHV-ST 236
R KIA G+A G+ +LH++ ANILLD F AK++DFGLA+ + V
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 237 RVMGT 241
R++GT
Sbjct: 188 RIVGT 192
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 31/185 (16%)
Query: 88 TFTYEELARATDGFSD------ANLLRQDGFGYVHRGVLPNG---------------KEG 126
+F++ EL T+ F + N + GFG V++G + N +E
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 64
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-KGQPTMDWP 185
+++F E+++ ++ H++LV L+G+ + G LVY + N +L+ L G P + W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 186 TRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLAKIASDVNTHV-ST 236
R KIA G+A G+ +LH++ ANILLD F AK++DFGLA+ + V +
Sbjct: 125 XRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 237 RVMGT 241
R++GT
Sbjct: 185 RIVGT 189
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 27/155 (17%)
Query: 101 FSDANLLRQDG---FGYVHRG-----------VLPNGKEGER--EFQAEVEIISRVHHKH 144
+ D N+ + G FG VHR ++ ER EF EV I+ R+ H +
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 145 LVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG-QPTMDWPTRIKIALGSAKGLAYLHD 203
+V +G T +V E++ +L LH G + +D R+ +A AKG+ YLH+
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 204 --------DLA--NILLDFKFEAKVADFGLAKIAS 228
DL N+L+D K+ KV DFGL+++ +
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA 190
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 27/155 (17%)
Query: 101 FSDANLLRQDG---FGYVHRG-----------VLPNGKEGER--EFQAEVEIISRVHHKH 144
+ D N+ + G FG VHR ++ ER EF EV I+ R+ H +
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 145 LVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG-QPTMDWPTRIKIALGSAKGLAYLHD 203
+V +G T +V E++ +L LH G + +D R+ +A AKG+ YLH+
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 204 ----------DLANILLDFKFEAKVADFGLAKIAS 228
N+L+D K+ KV DFGL+++ +
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL-VFHLHGKGQPTMDWPT 186
R+F +E I+ + H +++ L G T G M+V E++ N +L F GQ T+
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 187 RIKIALGSA----KGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ +G+ L Y+H DLA N+L+D KV+DFGL+++ D
Sbjct: 155 GMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL-VFHLHGKGQPTMDWPT 186
R+F +E I+ + H +++ L G T G M+V E++ N +L F GQ T+
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 187 RIKIALGSA----KGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ +G+ L Y+H DLA N+L+D KV+DFGL+++ D
Sbjct: 155 GMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 74/167 (44%), Gaps = 42/167 (25%)
Query: 111 GFGYVHRGVLPNGK-------------EGE-------REFQAEVEIISRVHHKHLVSLVG 150
GFG VH+G L K EGE +EFQ EV I+S ++H ++V L G
Sbjct: 31 GFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG 90
Query: 151 YYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL--------H 202
+ +V EFV L L K P + W ++++ L A G+ Y+ H
Sbjct: 91 LMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYMQNQNPPIVH 147
Query: 203 DDL--ANILLDFKFE-----AKVADFGLAKIASDVNTHVSTRVMGTF 242
DL NI L E AKVADFGL S + H + ++G F
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGL----SQQSVHSVSGLLGNF 190
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL-VFHLHGKGQPTMDWPT 186
R+F E I+ + H ++V L G T G M+V EF+ N L F GQ T+
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQ 146
Query: 187 RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTRV 238
+ + G A G+ YL H DLA NIL++ KV+DFGL+++ D V T
Sbjct: 147 LVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT 206
Query: 239 MG 240
G
Sbjct: 207 GG 208
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
F AE +++++ H +LV L+G + +V E++ +LV +L +G+ + +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIAS 228
K +L + + YL H DLA N+L+ AKV+DFGL K AS
Sbjct: 293 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
F AE +++++ H +LV L+G + +V E++ +LV +L +G+ + +
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIAS 228
K +L + + YL H DLA N+L+ AKV+DFGL K AS
Sbjct: 112 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 159
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL-VFHLHGKGQPTMDWPT 186
R+F +E I+ + H +++ L G T + M++ EF+ N +L F GQ T+
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQ 136
Query: 187 RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL++ D
Sbjct: 137 LVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
F AE +++++ H +LV L+G + +V E++ +LV +L +G+ + +
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIAS 228
K +L + + YL H DLA N+L+ AKV+DFGL K AS
Sbjct: 121 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
F AE +++++ H +LV L+G + +V E++ +LV +L +G+ + +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIAS 228
K +L + + YL H DLA N+L+ AKV+DFGL K AS
Sbjct: 106 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 84 FSKSTFTYEELARATDG--FSDANLLRQDGFGYVHRG--VLPNGKE-------------- 125
F T T E A+ D S ++ FG V G LP+ KE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 126 -GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW 184
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTV 146
Query: 185 PTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGLA++ D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED 199
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL---YAVVSEEPIYIVTEYMSK 96
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 97 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 156
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 157 DFGLARLIED 166
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 30 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIXIVTEYMSK 86
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 87 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 146
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 147 DFGLARLIED 156
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 289 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 345
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 405
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 406 DFGLARLIED 415
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVCEYMSK 96
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 97 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 156
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 157 DFGLARLIED 166
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 33 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 89
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 90 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 149
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 150 DFGLARLIED 159
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL-VFHLHGKGQPTMDWPT 186
R+F E I+ + H +++ L G T M+V E++ N +L F GQ T+
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQ 125
Query: 187 RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G + G+ YL H DLA NIL++ KV+DFGL+++ D
Sbjct: 126 LVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 176
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 206 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 262
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 322
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 323 DFGLARLIED 332
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 206 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 262
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 322
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 323 DFGLARLIED 332
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYMSK 96
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 97 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 156
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 157 DFGLARLIED 166
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYMSK 96
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 97 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 156
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 157 DFGLARLIED 166
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 28/140 (20%)
Query: 112 FGYVHRGVL--PNGKEG---------------EREFQAEVEIISRVHHKHLVSLVGYYTA 154
FG V RG L P KE REF +E I+ + H +++ L G T
Sbjct: 29 FGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTN 88
Query: 155 GSQRMLVYEFVLNNTLVFHLH-GKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA- 206
M++ EF+ N L L GQ T+ + + G A G+ YL H DLA
Sbjct: 89 SMPVMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYLAEMSYVHRDLAA 146
Query: 207 -NILLDFKFEAKVADFGLAK 225
NIL++ KV+DFGL++
Sbjct: 147 RNILVNSNLVCKVSDFGLSR 166
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 122 NGKEGEREFQAEVEIISRVHHKHLVSLVGY-YTAGSQRM-LVYEFVLNNTLVFHLHGKGQ 179
+G + +R+FQ E++I+ +H +V G Y G Q + LV E++ + L L + +
Sbjct: 63 SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHR 121
Query: 180 PTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
+D + + KG+ YL H DLA NIL++ + K+ADFGLAK+
Sbjct: 122 ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 176
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 28/140 (20%)
Query: 112 FGYVHRGVL--PNGKEG---------------EREFQAEVEIISRVHHKHLVSLVGYYTA 154
FG V RG L P KE REF +E I+ + H +++ L G T
Sbjct: 27 FGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTN 86
Query: 155 GSQRMLVYEFVLNNTLVFHLH-GKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA- 206
M++ EF+ N L L GQ T+ + + G A G+ YL H DLA
Sbjct: 87 SMPVMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYLAEMSYVHRDLAA 144
Query: 207 -NILLDFKFEAKVADFGLAK 225
NIL++ KV+DFGL++
Sbjct: 145 RNILVNSNLVCKVSDFGLSR 164
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 96
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DLA NIL+ KVA
Sbjct: 97 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVA 156
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 157 DFGLARLIED 166
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVMEYMSK 96
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 97 GCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 156
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 157 DFGLARLIED 166
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 122 NGKEGEREFQAEVEIISRVHHKHLVSLVGY-YTAGSQRM-LVYEFVLNNTLVFHLHGKGQ 179
+G + +R+FQ E++I+ +H +V G Y G Q + LV E++ + L L + +
Sbjct: 51 SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHR 109
Query: 180 PTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
+D + + KG+ YL H DLA NIL++ + K+ADFGLAK+
Sbjct: 110 ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 164
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 96
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 97 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 156
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 157 DFGLARLIED 166
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 122 NGKEGEREFQAEVEIISRVHHKHLVSLVGY-YTAGSQRM-LVYEFVLNNTLVFHLHGKGQ 179
+G + +R+FQ E++I+ +H +V G Y G Q + LV E++ + L L + +
Sbjct: 50 SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHR 108
Query: 180 PTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
+D + + KG+ YL H DLA NIL++ + K+ADFGLAK+
Sbjct: 109 ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 163
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 29 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 85
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 86 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 145
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 146 DFGLARLIED 155
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 31 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 87
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 88 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 147
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 148 DFGLARLIED 157
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 96
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 97 GCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 156
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 157 DFGLARLIED 166
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ EF+ +L +L K + +D
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHI 117
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 84 FSKSTFTYEELARATDG--FSDANLLRQDGFGYVHRG--VLPNGKE-------------- 125
F T T E A+ D S ++ FG V G LP+ KE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 126 -GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW 184
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTV 146
Query: 185 PTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL+++ D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 84 FSKSTFTYEELARATDG--FSDANLLRQDGFGYVHRG--VLPNGKE-------------- 125
F T T E A+ D S ++ FG V G LP+ KE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 126 -GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW 184
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTV 146
Query: 185 PTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL+++ D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 28/170 (16%)
Query: 87 STFTYEELARATDG--FSDANLLRQDGFGYVHRG--VLPNGKE---------------GE 127
ST T E A+ D S ++ FG V G LP+ KE
Sbjct: 19 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 78
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQL 137
Query: 188 IKIALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL D DLA NIL++ KV+DFGL+++ D
Sbjct: 138 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 187
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL-VFHLHGKGQPTMDWPT 186
R+F +E I+ + H +++ L G T M++ E++ N +L F G+ T+
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 113
Query: 187 RIKIALGSA----KGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ +GS ++Y+H DLA NIL++ KV+DFG++++ D
Sbjct: 114 GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 162
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 84 FSKSTFTYEELARATDG--FSDANLLRQDGFGYVHRG--VLPNGKE-------------- 125
F T T E A+ D S ++ FG V G LP+ KE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 126 -GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW 184
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTV 146
Query: 185 PTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL+++ D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL-VFHLHGKGQPTMDWPT 186
R+F +E I+ + H +++ L G T M++ E++ N +L F G+ T+
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 119
Query: 187 RIKIALGSA----KGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ +GS ++Y+H DLA NIL++ KV+DFG++++ D
Sbjct: 120 GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 168
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 28/170 (16%)
Query: 87 STFTYEELARATDG--FSDANLLRQDGFGYVHRG--VLPNGKE---------------GE 127
ST T E A+ D S ++ FG V G LP+ KE
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQL 120
Query: 188 IKIALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL D DLA NIL++ KV+DFGL+++ D
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 206 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVGEYMSK 262
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 322
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 323 DFGLARLIED 332
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYT--AGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPT 186
+ + E+EI+ ++H+++V G T G+ L+ EF+ + +L +L K + ++
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQ 127
Query: 187 RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
++K A+ KG+ YL H DLA N+L++ + + K+ DFGL K
Sbjct: 128 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQL 149
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL+++ D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQL 149
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL+++ D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 71/173 (41%), Gaps = 28/173 (16%)
Query: 84 FSKSTFTYEELARATDG--FSDANLLRQDGFGYVHRG--VLPNGKE-------------- 125
F T T E A+ D S ++ FG V G LP+ KE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 126 -GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW 184
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTV 146
Query: 185 PTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL ++ D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYT--AGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPT 186
+ + E+EI+ ++H+++V G T G+ L+ EF+ + +L +L K + ++
Sbjct: 57 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQ 115
Query: 187 RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
++K A+ KG+ YL H DLA N+L++ + + K+ DFGL K
Sbjct: 116 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 162
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
R+F E I+ + H +++ L G T M+V E++ N +L L K
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQL 147
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL+++ D
Sbjct: 148 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 37 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMNK 93
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + ++ A G+AY+ H DL ANIL+ KVA
Sbjct: 94 GSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 153
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 154 DFGLARLIED 163
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 37 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMNK 93
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + ++ A G+AY+ H DL ANIL+ KVA
Sbjct: 94 GSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 153
Query: 220 DFGLAKIASD 229
DFGLA++ D
Sbjct: 154 DFGLARLIED 163
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 119 VLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL--HG 176
++ G E EF E + + ++ H LV G + +V E++ N L+ +L HG
Sbjct: 39 MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHG 98
Query: 177 KG-QPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIA 227
KG +P+ +++ +G+A+L H DLA N L+D KV+DFG+ +
Sbjct: 99 KGLEPS----QLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV 154
Query: 228 SDVNTHVST 236
D + +VS+
Sbjct: 155 LD-DQYVSS 162
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +++ ++ H+ LV L Y S+ +V E++
Sbjct: 207 NGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSK 263
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVA 219
+L+ L G+ + P + +A A G+AY+ H DL ANIL+ KVA
Sbjct: 264 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 323
Query: 220 DFGLAKIASD 229
DFGL ++ D
Sbjct: 324 DFGLGRLIED 333
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 63 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 121
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 122 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 170
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 87 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 145
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 146 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 194
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 117
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 61 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 119
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 120 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 168
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 54 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 112
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 113 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 161
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 114
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 132
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 55 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 113
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 114 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 162
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 114
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 132
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 114
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 60 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 118
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 119 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 167
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 62 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 120
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 121 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 169
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL-VFHLHGKGQPTMDWPT 186
R+F +E I+ + H +++ L G T + M++ EF+ N +L F GQ T+
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQ 110
Query: 187 RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H LA NIL++ KV+DFGL++ D
Sbjct: 111 LVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED 161
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 53 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 111
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 112 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 169
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 71/173 (41%), Gaps = 28/173 (16%)
Query: 84 FSKSTFTYEELARATDG--FSDANLLRQDGFGYVHRG--VLPNGKE-------------- 125
F T T E A+ D S ++ FG V G LP+ KE
Sbjct: 28 FEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 126 -GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW 184
R+F E I+ + H +++ L G T M+V E + N +L L K
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTV 146
Query: 185 PTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL+++ D
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 75 PQSPGLSLGFSKSTFTYEELARATDG-FSDANLLRQDGFGYVHRGVLPNGKEGEREFQAE 133
PQ P + T + + R G F + + +G V L G F AE
Sbjct: 9 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 68
Query: 134 VEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALG 193
++ ++ H+ LV L T ++ E++ N +LV L + + +A
Sbjct: 69 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 127
Query: 194 SAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 128 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 171
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 75 PQSPGLSLGFSKSTFTYEELARATDG-FSDANLLRQDGFGYVHRGVLPNGKEGEREFQAE 133
PQ P + T + + R G F + + +G V L G F AE
Sbjct: 5 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 64
Query: 134 VEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALG 193
++ ++ H+ LV L T ++ E++ N +LV L + + +A
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 194 SAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 167
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 54 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 112
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 113 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 170
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query: 108 RQDGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLN 167
R+ G V + ++ +E +R F EV+++ + H +++ +G + + E++
Sbjct: 32 RETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG 91
Query: 168 NTLVFHLHGKGQPTMD----WPTRIKIALGSAKGLAYLHD------DLA--NILLDFKFE 215
TL + +MD W R+ A A G+AYLH DL N L+
Sbjct: 92 GTLRGIIK-----SMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKN 146
Query: 216 AKVADFGLAKIASDVNTH 233
VADFGLA++ D T
Sbjct: 147 VVVADFGLARLMVDEKTQ 164
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 122 NGKEGEREFQAEVEIISRVHHKHLVSL--VGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
+G + +R+FQ E++I+ +H +V V Y + LV E++ + L L + +
Sbjct: 47 SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQ-RHR 105
Query: 180 PTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
+D + + KG+ YL H DLA NIL++ + K+ADFGLAK+
Sbjct: 106 ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 160
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 45 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 103
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 104 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 51 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 109
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 110 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 167
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Query: 87 STFTYEELARATDG--FSDANLLRQDGFGYVHRG--VLPNGKE---------------GE 127
ST T E A+ D S ++ FG V G LP+ KE
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
R+F E I+ + H +++ L G T M+V E + N +L L K
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQL 120
Query: 188 IKIALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL D DLA NIL++ KV+DFGL+++ D
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 50 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 108
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 109 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 166
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 45 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 103
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 104 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 40 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 98
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 99 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 156
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 47 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 105
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 106 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 163
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 112 FGYVHRGVLPN-----------GKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML 160
FG VH G N G E +F E E++ ++ H LV L G + L
Sbjct: 20 FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL 79
Query: 161 VYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDF 212
V+EF+ + L +L + + T + + L +G+AYL H DLA N L+
Sbjct: 80 VFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 138
Query: 213 KFEAKVADFGLAKIASDVNTHVST 236
KV+DFG+ + D ST
Sbjct: 139 NQVIKVSDFGMTRFVLDDQYTSST 162
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 112 FGYVHRGVLPN-----------GKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML 160
FG VH G N G E +F E E++ ++ H LV L G + L
Sbjct: 18 FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL 77
Query: 161 VYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDF 212
V+EF+ + L +L + + T + + L +G+AYL H DLA N L+
Sbjct: 78 VFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 136
Query: 213 KFEAKVADFGLAKIASDVNTHVST 236
KV+DFG+ + D ST
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSST 160
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 45 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 103
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 104 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 112 FGYVHRGVLPN-----------GKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML 160
FG VH G N G E +F E E++ ++ H LV L G + L
Sbjct: 23 FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL 82
Query: 161 VYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDF 212
V+EF+ + L +L + + T + + L +G+AYL H DLA N L+
Sbjct: 83 VFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 141
Query: 213 KFEAKVADFGLAKIASDVNTHVST 236
KV+DFG+ + D ST
Sbjct: 142 NQVIKVSDFGMTRFVLDDQYTSST 165
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 112 FGYVHRGVLPN-----------GKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML 160
FG VH G N G E +F E E++ ++ H LV L G + L
Sbjct: 20 FGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL 79
Query: 161 VYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDF 212
V+EF+ + L +L + + T + + L +G+AYL H DLA N L+
Sbjct: 80 VFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGE 138
Query: 213 KFEAKVADFGLAKIASDVNTHVST 236
KV+DFG+ + D ST
Sbjct: 139 NQVIKVSDFGMTRFVLDDQYTSST 162
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L + +D
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE-RIDHI 117
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H DLA NIL++ + K+ DFGL K+
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 45 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 103
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 104 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 46 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 104
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 105 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 162
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
R+F E I+ + H +++ L G T M+V E + N +L L K
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQL 149
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G A G+ YL H DLA NIL++ KV+DFGL+++ D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL-VFHLHGKGQPTMDWPT 186
R+F +E I+ + H +++ L G T M++ E++ N +L F G+ T+
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQ 132
Query: 187 RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ + G G+ YL H DLA NIL++ KV+DFG++++ D
Sbjct: 133 LVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Query: 112 FGYVHRGVLPNG--------KEG---EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRML 160
FG VH G N KEG E +F E E++ ++ H LV L G + L
Sbjct: 40 FGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL 99
Query: 161 VYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDF 212
V+EF+ + L +L + + T + + L +G+AYL H DLA N L+
Sbjct: 100 VFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 158
Query: 213 KFEAKVADFGLAKIASDVNTHVST 236
KV+DFG+ + D ST
Sbjct: 159 NQVIKVSDFGMTRFVLDDQYTSST 182
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 119 VLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-- 176
++ G E EF E +++ + H+ LV L G T ++ E++ N L+ +L
Sbjct: 40 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 99
Query: 177 ---KGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVN 231
+ Q ++ + A+ + +LH DLA N L++ + KV+DFGL++ D +
Sbjct: 100 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-D 158
Query: 232 THVSTR 237
+ S+R
Sbjct: 159 EYTSSR 164
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 55 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLID 112
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLAKIAS 228
IA +A+G+ YLH DL NI L K+ DFGLA + S
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKS 159
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 124 KEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD 183
+E + F+ EV S++ H+++VS++ LV E++ TL ++ G ++D
Sbjct: 52 EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD 111
Query: 184 ----WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
+ +I + A + +H D+ NIL+D K+ DFG+AK S+ + +
Sbjct: 112 TAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH 171
Query: 238 VMGT 241
V+GT
Sbjct: 172 VLGT 175
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G + F E ++ + H LV L T ++ EF+ +L+ L
Sbjct: 44 LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEG 103
Query: 180 PTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ P I + A+G+AY+ H DL AN+L+ K+ADFGLA++ D
Sbjct: 104 GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED 161
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL---HGKGQPTMDWPT 186
F AE ++ + H LV L T ++ EF+ +L+ L G QP P
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL---PK 285
Query: 187 RIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
I + A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 286 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED 336
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL---HGKGQPTMDWPT 186
F AE ++ + H LV L T ++ EF+ +L+ L G QP P
Sbjct: 57 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL---PK 112
Query: 187 RIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
I + A+G+A Y+H DL ANIL+ K+ADFGLA++ D
Sbjct: 113 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED 163
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 119 VLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-- 176
++ G E EF E +++ + H+ LV L G T ++ E++ N L+ +L
Sbjct: 55 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 114
Query: 177 ---KGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ Q ++ + A+ + +LH DLA N L++ + KV+DFGL++ D
Sbjct: 115 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 119 VLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-- 176
++ G E EF E +++ + H+ LV L G T ++ E++ N L+ +L
Sbjct: 55 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 114
Query: 177 ---KGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ Q ++ + A+ + +LH DLA N L++ + KV+DFGL++ D
Sbjct: 115 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVG-YYTAGSQRM-LVYEFVLNNTLVFHLHGKGQPTMDWP 185
R+F+ E+EI+ + H ++V G Y+AG + + L+ E++ +L +L K + +D
Sbjct: 57 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHI 115
Query: 186 TRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
++ KG+ YL H +LA NIL++ + K+ DFGL K+
Sbjct: 116 KLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKV 164
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 119 VLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-- 176
++ G E EF E +++ + H+ LV L G T ++ E++ N L+ +L
Sbjct: 39 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 98
Query: 177 ---KGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ Q ++ + A+ + +LH DLA N L++ + KV+DFGL++ D
Sbjct: 99 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 156
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 119 VLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-- 176
++ G E EF E +++ + H+ LV L G T ++ E++ N L+ +L
Sbjct: 46 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 105
Query: 177 ---KGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ Q ++ + A+ + +LH DLA N L++ + KV+DFGL++ D
Sbjct: 106 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 163
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 119 VLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-- 176
++ G E EF E +++ + H+ LV L G T ++ E++ N L+ +L
Sbjct: 40 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 99
Query: 177 ---KGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ Q ++ + A+ + +LH DLA N L++ + KV+DFGL++ D
Sbjct: 100 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 157
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 119 VLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-- 176
++ G E EF E +++ + H+ LV L G T ++ E++ N L+ +L
Sbjct: 35 MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR 94
Query: 177 ---KGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ Q ++ + A+ + +LH DLA N L++ + KV+DFGL++ D
Sbjct: 95 HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 105 NLLRQDGFGYVHRGVLPNGKEGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE 163
NLL + V L E R+ FQ E E+++ + H+H+V G T G ++V+E
Sbjct: 64 NLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123
Query: 164 FV----LNNTLVFH-----LHGKGQPTMDWP----TRIKIALGSAKGLAYL------HDD 204
++ LN L H L G+ P + +A A G+ YL H D
Sbjct: 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 183
Query: 205 LA--NILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 239
LA N L+ K+ DFG+++ I S V R M
Sbjct: 184 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G F AE ++ ++ H+ LV L T ++ E++ N +LV L
Sbjct: 41 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG 99
Query: 180 PTMDWPTRIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ + +A A+G+A Y+H +L ANIL+ K+ADFGLA++ D
Sbjct: 100 IKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIED 157
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY TA Q +V ++ ++L HLH + + I
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 108
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLAKIAS 228
IA +A+G+ YLH DL NI L K+ DFGLA + S
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 105 NLLRQDGFGYVHRGVLPNGKEGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE 163
NLL + V L E R+ FQ E E+++ + H+H+V G T G ++V+E
Sbjct: 35 NLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 94
Query: 164 FV----LNNTLVFH-----LHGKGQPTMDWP----TRIKIALGSAKGLAYL------HDD 204
++ LN L H L G+ P + +A A G+ YL H D
Sbjct: 95 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 154
Query: 205 LA--NILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 239
LA N L+ K+ DFG+++ I S V R M
Sbjct: 155 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 105 NLLRQDGFGYVHRGVLPNGKEGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYE 163
NLL + V L E R+ FQ E E+++ + H+H+V G T G ++V+E
Sbjct: 41 NLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 100
Query: 164 FV----LNNTLVFH-----LHGKGQPTMDWP----TRIKIALGSAKGLAYL------HDD 204
++ LN L H L G+ P + +A A G+ YL H D
Sbjct: 101 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 160
Query: 205 LA--NILLDFKFEAKVADFGLAK-IASDVNTHVSTRVM 239
LA N L+ K+ DFG+++ I S V R M
Sbjct: 161 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 38/146 (26%)
Query: 112 FGYVHRGV-LPNG--------------KEGEREFQAEVE---IISRVHHKHLVSLVGYYT 153
FG VH+GV +P G K G + FQA + I + H H+V L+G
Sbjct: 44 FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL-C 102
Query: 154 AGSQRMLVYEFVLNNTLVFHLHG-KG----QPTMDWPTRIKIALGSAKGLAYL------H 202
GS LV +++ +L+ H+ +G Q ++W +I AKG+ YL H
Sbjct: 103 PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLEEHGMVH 156
Query: 203 DDLA--NILLDFKFEAKVADFGLAKI 226
+LA N+LL + +VADFG+A +
Sbjct: 157 RNLAARNVLLKSPSQVQVADFGVADL 182
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 38/146 (26%)
Query: 112 FGYVHRGV-LPNG--------------KEGEREFQAEVE---IISRVHHKHLVSLVGYYT 153
FG VH+GV +P G K G + FQA + I + H H+V L+G
Sbjct: 26 FGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL-C 84
Query: 154 AGSQRMLVYEFVLNNTLVFHLHG-KG----QPTMDWPTRIKIALGSAKGLAYL------H 202
GS LV +++ +L+ H+ +G Q ++W +I AKG+ YL H
Sbjct: 85 PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLEEHGMVH 138
Query: 203 DDLA--NILLDFKFEAKVADFGLAKI 226
+LA N+LL + +VADFG+A +
Sbjct: 139 RNLAARNVLLKSPSQVQVADFGVADL 164
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 15/131 (11%)
Query: 110 DGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFVLN 167
+G V L G F E +I+ ++ H LV L Y S+ +V E++
Sbjct: 31 NGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL---YAVVSEEPIYIVTEYMNK 87
Query: 168 NTLV-FHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKV 218
+L+ F G+G+ + P + +A A G+AY+ H DL ANIL+ K+
Sbjct: 88 GSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKI 146
Query: 219 ADFGLAKIASD 229
ADFGLA++ D
Sbjct: 147 ADFGLARLIED 157
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Query: 120 LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ 179
L G + F E ++ + H LV L T ++ E++ +L+ L
Sbjct: 45 LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEG 104
Query: 180 PTMDWPTRIKIALGSAKGLAYL------HDDL--ANILLDFKFEAKVADFGLAKIASD 229
+ P I + A+G+AY+ H DL AN+L+ K+ADFGLA++ D
Sbjct: 105 GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED 162
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 19/119 (15%)
Query: 126 GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFH-----LHG 176
++F E E+++ + H+H+V G G ++V+E++ LN L H L
Sbjct: 58 ARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMA 117
Query: 177 KGQP--TMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+G P + + IA A G+ YL H DLA N L+ K+ DFG+++
Sbjct: 118 EGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 20/118 (16%)
Query: 122 NGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK---- 177
G + EF E I++ + H HLV L+G + + + LV + + + L+ ++H
Sbjct: 79 TGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNI 137
Query: 178 -GQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
Q ++W +I AKG+ YL H DLA N+L+ K+ DFGLA++
Sbjct: 138 GSQLLLNWCVQI------AKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL 189
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL---HGKGQPTMDWPT 186
F AE ++ + H LV L T ++ EF+ +L+ L G QP P
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL---PK 279
Query: 187 RIKIALGSAKGLA------YLHDDL--ANILLDFKFEAKVADFGLAKIAS 228
I + A+G+A Y+H DL ANIL+ K+ADFGLA++ +
Sbjct: 280 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGA 329
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 136
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLAKIAS 228
IA +A+G+ YLH DL NI L K+ DFGLA + S
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 183
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 20/118 (16%)
Query: 122 NGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK---- 177
G + EF E I++ + H HLV L+G + + + LV + + + L+ ++H
Sbjct: 56 TGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNI 114
Query: 178 -GQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKI 226
Q ++W +I AKG+ YL H DLA N+L+ K+ DFGLA++
Sbjct: 115 GSQLLLNWCVQI------AKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL 166
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 78 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 135
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLAKIAS 228
IA +A+G+ YLH DL NI L K+ DFGLA + S
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 182
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 113
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLAKIAS 228
IA +A+G+ YLH DL NI L K+ DFGLA + S
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 113
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLAKIAS 228
IA +A+G+ YLH DL NI L K+ DFGLA + S
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 126 GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFH-----LHG 176
++FQ E E+++ + H+H+V G G ++V+E++ LN L H +
Sbjct: 60 ARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILV 119
Query: 177 KGQP-----TMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
GQP + + IA A G+ YL H DLA N L+ K+ DFG+
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 224 AK 225
++
Sbjct: 180 SR 181
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 53 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 110
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLAKIAS 228
IA +A+G+ YLH DL NI L K+ DFGLA + S
Sbjct: 111 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 157
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 108
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLAKIAS 228
IA +A+G+ YLH DL NI L K+ DFGLA + S
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 84 FSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGVLPNGKEGERE-------------- 129
F S F +E + + + L Q FG V+ G + +GE E
Sbjct: 2 FPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 130 -----FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL--------HG 176
F E ++ H+V L+G + G ++V E + + L +L +
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 177 KGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
G+P I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 84 FSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGVLPNGKEGERE-------------- 129
F S F +E + + + L Q FG V+ G + +GE E
Sbjct: 2 FPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 130 -----FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL--------HG 176
F E ++ H+V L+G + G ++V E + + L +L +
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 177 KGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
G+P I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 84 FSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGVLPNGKEGERE-------------- 129
F S F +E + + + L Q FG V+ G + +GE E
Sbjct: 2 FPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 130 -----FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL--------HG 176
F E ++ H+V L+G + G ++V E + + L +L +
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 177 KGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
G+P I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPT 186
+AE I+ V H +V L+ + G + L+ E++ L L +G D +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 187 RIKIALGS--AKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
I +ALG KG+ Y NI+L+ + K+ DFGL K
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPT 186
+AE I+ V H +V L+ + G + L+ E++ L L +G D +
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 187 RIKIALGS--AKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
I +ALG KG+ Y NI+L+ + K+ DFGL K
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 118 GVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFV----LNNTLV 171
G P + G +Q E+EI+ ++H+H+V G ++ LV E+V L + L
Sbjct: 49 GCGPQLRSG---WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP 105
Query: 172 FHLHGKGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
H G Q + + +I + Y+H LA N+LLD K+ DFGLAK +
Sbjct: 106 RHCVGLAQLLL-FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
Query: 230 VNTHVSTRVMG 240
+ + R G
Sbjct: 165 GHEYYRVREDG 175
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 118 GVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFV----LNNTLV 171
G P + G +Q E+EI+ ++H+H+V G ++ LV E+V L + L
Sbjct: 48 GCGPQLRSG---WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP 104
Query: 172 FHLHGKGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
H G Q + + +I + Y+H LA N+LLD K+ DFGLAK +
Sbjct: 105 RHCVGLAQLLL-FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
Query: 230 VNTHVSTRVMG 240
+ + R G
Sbjct: 164 GHEYYRVREDG 174
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 123 GKEGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEF--------------VLN 167
K+ R+F E+E++ ++ HH ++++L+G L E+ VL
Sbjct: 55 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 114
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVA 219
F + T+ + A A+G+ YL H DLA NIL+ + AK+A
Sbjct: 115 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 174
Query: 220 DFGLAK 225
DFGL++
Sbjct: 175 DFGLSR 180
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 475
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 474
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 123 GKEGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEF--------------VLN 167
K+ R+F E+E++ ++ HH ++++L+G L E+ VL
Sbjct: 65 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 124
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVA 219
F + T+ + A A+G+ YL H DLA NIL+ + AK+A
Sbjct: 125 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184
Query: 220 DFGLAK 225
DFGL++
Sbjct: 185 DFGLSR 190
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 35/148 (23%)
Query: 112 FGYVHRGVL--PNGK---------------EGER-EFQAEVEIISRVHHKHLVSLVGYYT 153
FG V++G+L +GK E +R +F E I+ + H +++ L G +
Sbjct: 57 FGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS 116
Query: 154 AGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLA----------YLHD 203
M++ E++ N L L K D + +G +G+A Y+H
Sbjct: 117 KYKPMMIITEYMENGALDKFLREK-----DGEFSVLQLVGMLRGIAAGMKYLANMNYVHR 171
Query: 204 DLA--NILLDFKFEAKVADFGLAKIASD 229
DLA NIL++ KV+DFGL+++ D
Sbjct: 172 DLAARNILVNSNLVCKVSDFGLSRVLED 199
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 84 FSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGVLPNGKEGERE-------------- 129
F S + +E + + + L Q FG V+ G + +GE E
Sbjct: 2 FPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 130 -----FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL--------HG 176
F E ++ H+V L+G + G ++V E + + L +L +
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 177 KGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
G+P I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 122
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 137
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 130
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 19/124 (15%)
Query: 127 ERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD- 183
E+E +E++I+S + H+++V+L+G T G +++ E+ L+ L K + +D
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 184 ---WPTRIKIAL----GSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK-IA 227
P ++ L A+G+A+L H D+A N+LL AK+ DFGLA+ I
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 203
Query: 228 SDVN 231
+D N
Sbjct: 204 NDSN 207
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 110
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
+ T + AL +H D+ N+LL E K+ADFG +
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 19/124 (15%)
Query: 127 ERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD- 183
E+E +E++I+S + H+++V+L+G T G +++ E+ L+ L K + +D
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 184 ---WPTRIKIAL----GSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK-IA 227
P ++ L A+G+A+L H D+A N+LL AK+ DFGLA+ I
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 211
Query: 228 SDVN 231
+D N
Sbjct: 212 NDSN 215
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL--------HGKGQP 180
EF E ++ H+V L+G + G ++V E + + L +L + G+P
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 181 TMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 136
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLA 224
IA +A+G+ YLH DL NI L K+ DFGLA
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDW 184
E AE ++ ++ + ++V ++G A S MLV E LN L + H K + ++
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 112
Query: 185 PTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTH 233
++ + + + ++H DLA N+LL + AK++DFGL+K + +D N +
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL--------HGKGQP 180
EF E ++ H+V L+G + G ++V E + + L +L + G+P
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 181 TMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T + +V ++ ++L HLH + + I
Sbjct: 79 FRNEVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLID 136
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLAKIAS 228
IA +A+G+ YLH D+ NI L K+ DFGLA + S
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA 115
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 71 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 128
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLA 224
IA +A+G+ YLH DL NI L K+ DFGLA
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 128
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 129 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 170
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 116
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
F+ EV ++ + H +++ +GY T Q +V ++ ++L HLH + + I
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLID 108
Query: 190 IALGSAKGLAYLH------DDLA--NILLDFKFEAKVADFGLA 224
IA +A+G+ YLH DL NI L K+ DFGLA
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 112
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 115
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 112 TYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 110
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 111 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 49 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 108
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 109 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 111
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 35/173 (20%)
Query: 88 TFTYEELARATDGFSDANLLRQDGFGYVHRGVL-------PNGKEG-----------ER- 128
F +E A + + + L Q FG V+ GV P + ER
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 115 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 163
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+ + E++ + H H++ L + S +V E+V L ++ G+ +D
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESR 119
Query: 189 KIALGSAKGLAYLHDDLA--------NILLDFKFEAKVADFGLAKIASD 229
++ G+ Y H + N+LLD AK+ADFGL+ + SD
Sbjct: 120 RLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 115 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 163
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 35/194 (18%)
Query: 71 APILPQSPGLSLGFSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGV----------- 119
+P+ Q PG+ + + +L R G FG V +G+
Sbjct: 5 SPVAVQVPGMQNNIADPEELFTKLERIGKG----------SFGEVFKGIDNRTQQVVAIK 54
Query: 120 ---LPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG 176
L ++ + Q E+ ++S+ ++ G Y GS+ ++ E++ + + L
Sbjct: 55 IIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA 114
Query: 177 KGQPTMDWPTRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLAKIAS 228
T +K L KGL YLH + AN+LL + + K+ADFG+A +
Sbjct: 115 GPFDEFQIATMLKEIL---KGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 171
Query: 229 DVNTHVSTRVMGTF 242
D +T V F
Sbjct: 172 DTQIKRNTFVGTPF 185
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 123 GKEGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEF--------------VLN 167
K+ R+F E+E++ ++ HH ++++L+G L E+ VL
Sbjct: 62 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLE 121
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVA 219
F + T+ + A A+G+ YL H +LA NIL+ + AK+A
Sbjct: 122 TDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIA 181
Query: 220 DFGLAK 225
DFGL++
Sbjct: 182 DFGLSR 187
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 118 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 166
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ + L Q T
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 127 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 175
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYT-AGSQRM-LVYEFV----LNNTLVFHLHGKGQPTMD 183
++ E++I+ ++H+H++ G AG+ + LV E+V L + L H G Q +
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL- 138
Query: 184 WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ +I + Y+H DLA N+LLD K+ DFGLAK
Sbjct: 139 FAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG----KGQPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ + L Q T
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA 116
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+ADFG
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L P +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 124 KEG-EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---- 178
KEG E + + E+EI S + H +++ + Y+ + L+ EF L L G
Sbjct: 55 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE 114
Query: 179 QPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
Q + + + AL +H D+ N+L+ +K E K+ADFG
Sbjct: 115 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 23/121 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 76 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 186 T-------------RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLA 224
T I + AKG+ +L H DLA NILL K K+ DFGLA
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 225 K 225
+
Sbjct: 196 R 196
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 124 KEG-EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---- 178
KEG E + + E+EI S + H +++ + Y+ + L+ EF L L G
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE 113
Query: 179 QPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
Q + + + AL +H D+ N+L+ +K E K+ADFG
Sbjct: 114 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 112 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 160
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 30/127 (23%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTL-------------- 170
+FQ E +++ + ++V L+G G L++E++ LN L
Sbjct: 96 DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS 155
Query: 171 ----VFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKV 218
+ G P + ++ IA A G+AYL H DLA N L+ K+
Sbjct: 156 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKI 215
Query: 219 ADFGLAK 225
ADFGL++
Sbjct: 216 ADFGLSR 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L P +
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N ++ F K+ DFG+ +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 84 FSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGVLPNGKEGERE-------------- 129
F S + +E + + + L Q FG V+ G + +GE E
Sbjct: 3 FPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 62
Query: 130 -----FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL--------HG 176
F E ++ H+V L+G + G ++V E + + L +L +
Sbjct: 63 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 122
Query: 177 KGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
G+P I++A A G+AYL H +LA N ++ F K+ DFG+ +
Sbjct: 123 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 124 KEG-EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---- 178
KEG E + + E+EI S + H +++ + Y+ + L+ EF L L G
Sbjct: 54 KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE 113
Query: 179 QPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
Q + + + AL +H D+ N+L+ +K E K+ADFG
Sbjct: 114 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 84 FSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGVLPNGKEGERE-------------- 129
F S + +E + + + L Q FG V+ G + +GE E
Sbjct: 2 FPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 130 -----FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL--------HG 176
F E ++ H+V L+G + G ++V E + + L +L +
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 177 KGQPTMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
G+P I++A A G+AYL H +LA N ++ F K+ DFG+ +
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 37/155 (23%)
Query: 114 YVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFH 173
YV + P + + + EV + + H++++ +G G+ ++ L+
Sbjct: 49 YVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS------VDVDLWLITA 102
Query: 174 LHGKGQPT-------MDWPTRIKIALGSAKGLAYLHDDL------------------ANI 208
H KG + + W IA A+GLAYLH+D+ N+
Sbjct: 103 FHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNV 162
Query: 209 LLDFKFEAKVADFGLA------KIASDVNTHVSTR 237
LL A +ADFGLA K A D + V TR
Sbjct: 163 LLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR 197
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 112 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 160
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 112 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 160
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 106 LLRQDGFGYVHRGVL-PNGKEGERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY 162
L++ D V +L P+ ERE +E++++S + +H ++V+L+G T G +++
Sbjct: 47 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106
Query: 163 EFVLNNTLVFHLHGKGQPTMDWPTRIKI----------------ALGSAKGLAYL----- 201
E+ L+ L K + T I + AKG+A+L
Sbjct: 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 166
Query: 202 -HDDLA--NILLDFKFEAKVADFGLAK-IASDVN 231
H DLA NILL K+ DFGLA+ I +D N
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK++++L+G T ++ E+ L +L + P M++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 226 IASDVNTHVST 236
++++ + +T
Sbjct: 206 DINNIDYYKNT 216
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 106 LLRQDGFGYVHRGVL-PNGKEGERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY 162
L++ D V +L P+ ERE +E++++S + +H ++V+L+G T G +++
Sbjct: 63 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 122
Query: 163 EFVLNNTLVFHLHGKGQPTMDWPTRIKI----------------ALGSAKGLAYL----- 201
E+ L+ L K + T I + AKG+A+L
Sbjct: 123 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 182
Query: 202 -HDDLA--NILLDFKFEAKVADFGLAK-IASDVN 231
H DLA NILL K+ DFGLA+ I +D N
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK++++L+G T ++ E+ L +L + P M++
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 226 IASDVNTHVST 236
++++ + T
Sbjct: 206 DINNIDYYKKT 216
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 113
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+A+FG
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG 155
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 23/136 (16%)
Query: 124 KEGEREFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTM 182
+E + +E+E++ + HK++++L+G T ++ E+ L +L + P M
Sbjct: 81 EEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 183 DWPTRIK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVAD 220
++ I A+G+ YL H DLA N+L+ K+AD
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 221 FGLAKIASDVNTHVST 236
FGLA+ ++++ + T
Sbjct: 201 FGLARDINNIDYYKKT 216
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 106 LLRQDGFGYVHRGVL-PNGKEGERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY 162
L++ D V +L P+ ERE +E++++S + +H ++V+L+G T G +++
Sbjct: 65 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 124
Query: 163 EFVLNNTLVFHLHGKGQPTMDWPTRIKI----------------ALGSAKGLAYL----- 201
E+ L+ L K + T I + AKG+A+L
Sbjct: 125 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 184
Query: 202 -HDDLA--NILLDFKFEAKVADFGLAK-IASDVN 231
H DLA NILL K+ DFGLA+ I +D N
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 106 LLRQDGFGYVHRGVL-PNGKEGERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY 162
L++ D V +L P+ ERE +E++++S + +H ++V+L+G T G +++
Sbjct: 70 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 129
Query: 163 EFVLNNTLVFHLHGKGQPTMDWPTRIKI----------------ALGSAKGLAYL----- 201
E+ L+ L K + T I + AKG+A+L
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 189
Query: 202 -HDDLA--NILLDFKFEAKVADFGLAK-IASDVN 231
H DLA NILL K+ DFGLA+ I +D N
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 25/130 (19%)
Query: 127 ERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW 184
E+E +E++I+S + H+++V+L+G T G +++ E+ L+ L K P +++
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 185 P------------TRIKIALGS--AKGLAYL------HDDLA--NILLDFKFEAKVADFG 222
+R + S A+G+A+L H D+A N+LL AK+ DFG
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 211
Query: 223 LAK-IASDVN 231
LA+ I +D N
Sbjct: 212 LARDIMNDSN 221
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 360
Query: 184 -WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H +LA N L+ KVADFGL+++ +
Sbjct: 361 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 408
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 106 LLRQDGFGYVHRGVL-PNGKEGERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVY 162
L++ D V +L P+ ERE +E++++S + +H ++V+L+G T G +++
Sbjct: 70 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 129
Query: 163 EFVLNNTLVFHLHGKGQPTMDWPTRIKI----------------ALGSAKGLAYL----- 201
E+ L+ L K + T I + AKG+A+L
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 189
Query: 202 -HDDLA--NILLDFKFEAKVADFGLAK-IASDVN 231
H DLA NILL K+ DFGLA+ I +D N
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK++++L+G T ++ E+ L +L + P M++
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
Query: 226 IASDVNTHVST 236
++++ + T
Sbjct: 198 DINNIDYYKKT 208
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK++++L+G T ++ E+ L +L + P M++
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
Query: 226 IASDVNTHVST 236
++++ + T
Sbjct: 195 DINNIDYYKKT 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG----QPTM 182
E + + EVEI S + H +++ L GY+ ++ L+ E+ T+ L Q T
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA 114
Query: 183 DWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
+ T + AL +H D+ N+LL E K+A+FG
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 186 TR------------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I + AKG+ +L H DLA NILL K K+ DFGLA+
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + ++
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 318
Query: 184 -WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H +LA N L+ KVADFGL+++ +
Sbjct: 319 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 366
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG-----KGQPTMD 183
EF E ++ + H+V L+G + G +++ E + L +L + P +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 184 WPT---RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
P+ I++A A G+AYL H DLA N + F K+ DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK++++L+G T ++ E+ L +L + P M++
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 226 IASDVNTHVST 236
++++ + T
Sbjct: 252 DINNIDYYKKT 262
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 24/122 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQ---PTM 182
R +E++I+ + HH ++V+L+G T G M++ EF L +L K P
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 183 DWPTR-----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
+ P I + AKG+ +L H DLA NILL K K+ DFGL
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 196
Query: 224 AK 225
A+
Sbjct: 197 AR 198
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 155 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 204
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYY--TAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPT 186
+F E I+ H +++SL+G + GS +++ + F + PT+
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--D 152
Query: 187 RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 153 LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 203
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 134 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 131 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFV----LNNTLVFHLHGKGQPTMD 183
++ E++I+ ++H+H++ G ++ LV E+V L + L H G Q +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL- 121
Query: 184 WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 240
+ +I + Y+H +LA N+LLD K+ DFGLAK + + + R G
Sbjct: 122 FAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 133 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ YL H DLA N +LD KF KVADFGLA+ D
Sbjct: 128 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 177
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 186 TRIK----------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
K + AKG+ +L H DLA NILL K K+ DFGLA+
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQR--MLVYEFV----LNNTLVFHLHGKGQPTMD 183
++ E++I+ ++H+H++ G ++ LV E+V L + L H G Q +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL- 121
Query: 184 WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTRVMG 240
+ +I + Y+H +LA N+LLD K+ DFGLAK + + + R G
Sbjct: 122 FAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 23/128 (17%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK- 189
+E+E++ + HK++++L+G T ++ E+ L +L + P M++ I
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 190 -------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIAS 228
A+G+ YL H DLA N+L+ K+ADFGLA+ +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 229 DVNTHVST 236
+++ T
Sbjct: 209 NIDXXKKT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 138 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 122 NGKEGEREFQ---AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNN-TLVFHLHGK 177
+GK+ ++Q EV + ++ H + + G Y LV E+ L + + + +H K
Sbjct: 90 SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK 149
Query: 178 GQPTMDWPTRIKIALGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLAKIASD 229
++ + G+ +GLAYLH NILL K+ DFG A I +
Sbjct: 150 PLQEVEIAA---VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206
Query: 230 VNTHVST 236
N V T
Sbjct: 207 ANXFVGT 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 111 GFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL 170
++ R +L R + E+ + + H H++ L T + ++V E+ L
Sbjct: 38 ALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGEL 95
Query: 171 VFHLHGKGQPTMDWPTR----IKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
++ K + T D R I A+ +H DL N+LLD K+ADFGL+
Sbjct: 96 FDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
Query: 225 KIASDVN 231
I +D N
Sbjct: 156 NIMTDGN 162
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ Q EV+I ++ H ++ L Y+ + LV E N + +L + +P + R
Sbjct: 56 QRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR 115
Query: 188 IKIALGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLA 224
G+ YLH L+N+LL K+ADFGLA
Sbjct: 116 -HFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+ + E++ + H H++ L + + +V E+V L ++ G+ R+
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 189 KIALGSAKGLAY----LHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ SA + +H DL N+LLD AK+ADFGL+ + SD
Sbjct: 117 FQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+ + E++ + H H++ L + + +V E+V L ++ G+ R+
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 189 KIALGSAKGLAY----LHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ SA + +H DL N+LLD AK+ADFGL+ + SD
Sbjct: 117 FQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----- 183
EF E ++ + H +LV L+G T ++ EF+ L+ +L + +
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 321
Query: 184 -WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H +LA N L+ KVADFGL+++ +
Sbjct: 322 YMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 112 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 171
Query: 186 TR--------------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
I + AKG+ +L H DLA NILL K K+ DFGL
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 224 AK 225
A+
Sbjct: 232 AR 233
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 138 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 186 TR----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I + AKG+ +L H DLA NILL K K+ DFGLA+
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK++++L+G T ++ E+ L +L + P M++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DLA N+L+ ++ADFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
Query: 226 IASDVNTHVST 236
++++ + T
Sbjct: 206 DINNIDYYKKT 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 33/133 (24%)
Query: 125 EGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQP--- 180
E ER+ F E+ +SRV+H ++V L G + LV E+ +L LHG +P
Sbjct: 43 ESERKAFIVELRQLSRVNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHG-AEPLPY 99
Query: 181 -----TMDWPTRIKIALGSAKGLAYLHDDLANILLDFKFEA------------KVADFGL 223
M W L ++G+AYLH L+ + K+ DFG
Sbjct: 100 YTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG- 152
Query: 224 AKIASDVNTHVST 236
A D+ TH++
Sbjct: 153 --TACDIQTHMTN 163
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 33/133 (24%)
Query: 125 EGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQP--- 180
E ER+ F E+ +SRV+H ++V L G + LV E+ +L LHG +P
Sbjct: 42 ESERKAFIVELRQLSRVNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHG-AEPLPY 98
Query: 181 -----TMDWPTRIKIALGSAKGLAYLHDDLANILLDFKFEA------------KVADFGL 223
M W L ++G+AYLH L+ + K+ DFG
Sbjct: 99 YTAAHAMSW------CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG- 151
Query: 224 AKIASDVNTHVST 236
A D+ TH++
Sbjct: 152 --TACDIQTHMTN 162
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK+++ L+G T ++ E+ L +L + P M++
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 226 IASDVNTHVST 236
++++ + T
Sbjct: 206 DINNIDYYKKT 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI-A 191
E++++ + H +++ L+ + S LV++F+ + V K + P+ IK
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVII---KDNSLVLTPSHIKAYM 118
Query: 192 LGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAK 225
L + +GL YLH DL N+LLD K+ADFGLAK
Sbjct: 119 LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 134
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 135 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 170
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 186 TR--------------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
I + AKG+ +L H DLA NILL K K+ DFGL
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 224 AK 225
A+
Sbjct: 186 AR 187
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 122 NGKEGEREFQ---AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNN-TLVFHLHGK 177
+GK+ ++Q EV + ++ H + + G Y LV E+ L + + + +H K
Sbjct: 51 SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK 110
Query: 178 GQPTMDWPTRIKIALGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLAKIASD 229
++ + G+ +GLAYLH NILL K+ DFG A I +
Sbjct: 111 PLQEVEIAA---VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167
Query: 230 VNTHVST 236
N V T
Sbjct: 168 ANXFVGT 174
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 186 TR--------------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
I + AKG+ +L H DLA NILL K K+ DFGL
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 224 AK 225
A+
Sbjct: 195 AR 196
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 186 TR--------------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
I + AKG+ +L H DLA NILL K K+ DFGL
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 224 AK 225
A+
Sbjct: 195 AR 196
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 186 TR--------------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
I + AKG+ +L H DLA NILL K K+ DFGL
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 224 AK 225
A+
Sbjct: 195 AR 196
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 131
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 132 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
EF E ++ + H +LV L+G T +V E++ L+ +L + +
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 184 --WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
T+I A+ + ++H DLA N L+ KVADFGL+++ +
Sbjct: 133 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT 181
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGM 131
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 132 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 186 TR--------------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
I + AKG+ +L H DLA NILL K K+ DFGL
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 224 AK 225
A+
Sbjct: 186 AR 187
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 186 TR--------------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
I + AKG+ +L H DLA NILL K K+ DFGL
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 224 AK 225
A+
Sbjct: 186 AR 187
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 95 ARATDGFSDANLLRQDGFGYVHRGVLPNGKEGEREFQAEV---------EIISRV----- 140
A ++ G D +LLR G G + +L K+ +R + +V E I V
Sbjct: 13 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 141 ------HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRIKI 190
+H LV L + S+ V E+V L+FH+ + + + + I +
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 132
Query: 191 ALG--SAKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
AL +G+ Y L N+LLD + K+ D+G+ K
Sbjct: 133 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD---- 183
+ +E+E++ + HK++++L+G T ++ E+ L +L + P M+
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 184 ----------WPTRIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ + A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 226 IASDVNTHVST 236
++++ T
Sbjct: 206 DINNIDXXKKT 216
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 22/115 (19%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR-- 187
F E ++ ++H ++++L+G ML E + + L + HG + P R
Sbjct: 69 FLREGLLMRGLNHPNVLALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP 121
Query: 188 -----IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L A+G+ YL H DLA N +LD F KVADFGLA+ D
Sbjct: 122 TVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD 176
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 95 ARATDGFSDANLLRQDGFGYVHRGVLPNGKEGEREFQAEV---------EIISRV----- 140
A ++ G D +LLR G G + +L K+ +R + V E I V
Sbjct: 45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 141 ------HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRIKI 190
+H LV L + S+ V E+V L+FH+ + + + + I +
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 164
Query: 191 ALG--SAKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
AL +G+ Y L N+LLD + K+ D+G+ K
Sbjct: 165 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 24/122 (19%)
Query: 128 REFQAEVEIISRV-HHKHLVSLVGYYTA-GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
R +E++I+ + HH ++V+L+G T G M++ EF L +L K + +
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 186 TR--------------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGL 223
I + AKG+ +L H DLA NILL K K+ DFGL
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 224 AK 225
A+
Sbjct: 186 AR 187
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 102 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 155
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 156 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK++++L+G T ++ E+ L +L + P M++
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DL N+L+ K+ADFGLA+
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
Query: 226 IASDVNTHVST 236
++++ + T
Sbjct: 193 DINNIDYYKKT 203
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 23/128 (17%)
Query: 127 ERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW 184
E+E +E++I+S + H+++V+L+G T G +++ E+ L+ L K +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 185 P----------TRIKIALGS--AKGLAYL------HDDLA--NILLDFKFEAKVADFGLA 224
P TR + S A+G+A+L H D+A N+LL AK+ DFGLA
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 225 K-IASDVN 231
+ I +D N
Sbjct: 212 RDIMNDSN 219
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 23/128 (17%)
Query: 127 ERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW 184
E+E +E++I+S + H+++V+L+G T G +++ E+ L+ L K +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 185 P----------TRIKIALGS--AKGLAYL------HDDLA--NILLDFKFEAKVADFGLA 224
P TR + S A+G+A+L H D+A N+LL AK+ DFGLA
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 225 K-IASDVN 231
+ I +D N
Sbjct: 212 RDIMNDSN 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 133
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 134 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ +L H DLA N +LD KF KVADFGLA+ D
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 186
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ +L H DLA N +LD KF KVADFGLA+ D
Sbjct: 134 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ +L H DLA N +LD KF KVADFGLA+ D
Sbjct: 136 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ +L H DLA N +LD KF KVADFGLA+ D
Sbjct: 136 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ +L H DLA N +LD KF KVADFGLA+ D
Sbjct: 141 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 190
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYY--TAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPT 186
+F E I+ H +++SL+G + GS +++ + F + PT+
Sbjct: 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--D 193
Query: 187 RIKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ +L H DLA N +LD KF KVADFGLA+ D
Sbjct: 194 LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 138 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 83 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 136
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 137 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 172
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 111 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 164
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 165 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 200
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 87 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 140
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 141 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW---PTR 187
+E+E++ + HK++++L+G T ++ E+ L +L + P +++ P+
Sbjct: 123 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 182
Query: 188 -----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ A A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 183 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW---PTR 187
+E+E++ + HK++++L+G T ++ E+ L +L + P +++ P+
Sbjct: 74 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 133
Query: 188 -----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ A A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW---PTR 187
+E+E++ + HK++++L+G T ++ E+ L +L + P +++ P+
Sbjct: 71 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 130
Query: 188 -----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ A A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW---PTR 187
+E+E++ + HK++++L+G T ++ E+ L +L + P +++ P+
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSH 141
Query: 188 -----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ A A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 124
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFGLAK+
Sbjct: 125 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 34/144 (23%)
Query: 125 EGEREFQAEVEIISR--VHHKHLVSLVGYYTAGS----QRMLVYEFVLNNTLVFHLHGKG 178
+ ++ +Q+E EI S + H++L+ + GS + L+ F +L +L G
Sbjct: 49 QDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN- 107
Query: 179 QPTMDWPTRIKIALGSAKGLAYLHDDL-------------------ANILLDFKFEAKVA 219
+ W +A ++GL+YLH+D+ N+LL A +A
Sbjct: 108 --IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLA 165
Query: 220 DFGLA------KIASDVNTHVSTR 237
DFGLA K D + V TR
Sbjct: 166 DFGLAVRFEPGKPPGDTHGQVGTR 189
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 188 IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
I L AKG+ +L H DLA N +LD KF KVADFGLA+ D
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLD 186
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW---PTR 187
+E+E++ + HK++++L+G T ++ E+ L +L + P +++ P+
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 141
Query: 188 -----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ A A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW---PTR 187
+E+E++ + HK++++L+G T ++ E+ L +L + P +++ P+
Sbjct: 67 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 126
Query: 188 -----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ A A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 115 VHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT---LV 171
+ R L + E E++ +S+ HH ++VS + + LV + + + ++
Sbjct: 40 IKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 99
Query: 172 FHLHGKGQ---PTMDWPTRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVAD 220
H+ KG+ +D T I +GL YLH + NILL ++AD
Sbjct: 100 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIAD 159
Query: 221 FGLAKIASDVNTHVSTRVMGTF 242
FG++ + +V TF
Sbjct: 160 FGVSAFLATGGDITRNKVRKTF 181
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 115 VHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT---LV 171
+ R L + E E++ +S+ HH ++VS + + LV + + + ++
Sbjct: 45 IKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 104
Query: 172 FHLHGKGQ---PTMDWPTRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVAD 220
H+ KG+ +D T I +GL YLH + NILL ++AD
Sbjct: 105 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIAD 164
Query: 221 FGLAKIASDVNTHVSTRVMGTF 242
FG++ + +V TF
Sbjct: 165 FGVSAFLATGGDITRNKVRKTF 186
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW---PTR 187
+E+E++ + HK++++L+G T ++ E+ L +L + P +++ P+
Sbjct: 75 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 134
Query: 188 -----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ A A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW---PTR 187
+E+E++ + HK++++L+G T ++ E+ L +L + P +++ P+
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 141
Query: 188 -----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ A A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 100 GFSDANLLRQDGFGYVHRGVLPNGKEGEREFQAEV---------EIISRV---------- 140
G D +LLR G G + +L K+ +R + +V E I V
Sbjct: 3 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 141 -HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRIKIALG-- 193
+H LV L + S+ V E+V L+FH+ + + + + I +AL
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 194 SAKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
+G+ Y L N+LLD + K+ D+G+ K
Sbjct: 123 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 100 GFSDANLLRQDGFGYVHRGVLPNGKEGEREFQAEV---------EIISRV---------- 140
G D +LLR G G + +L K+ +R + +V E I V
Sbjct: 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 141 -HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRIKIALG-- 193
+H LV L + S+ V E+V L+FH+ + + + + I +AL
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 194 SAKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
+G+ Y L N+LLD + K+ D+G+ K
Sbjct: 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL--VFHLHGKGQPTMDWP 185
+E E+ I+ + H+V G Y + +V E+ ++ + L K T+
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK---TLTED 125
Query: 186 TRIKIALGSAKGLAYLH------DDL--ANILLDFKFEAKVADFGLAKIASD 229
I + KGL YLH D+ NILL+ + AK+ADFG+A +D
Sbjct: 126 EIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK++++L+G T ++ + L +L + P M++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 226 IASDVNTHVST 236
++++ + T
Sbjct: 206 DINNIDYYKKT 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 119 VLPNGKE--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG 176
VL G E E E +I+ ++ + ++V L+G A + MLV E L L G
Sbjct: 44 VLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVG 102
Query: 177 KGQP-----TMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
K + + ++ + + + ++H DLA N+LL + AK++DFGL+K
Sbjct: 103 KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162
Query: 230 VNTHVSTRVMGTF 242
+++ + R G +
Sbjct: 163 DDSYYTARSAGKW 175
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 132 AEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDW---PTR 187
+E+E++ + HK++++L+G T ++ E+ L +L + P +++ P+
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 188 -----------IKIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
+ A A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 12/102 (11%)
Query: 141 HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAY 200
+H L L + + V EFV L+FH+ + D A L +
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMF 139
Query: 201 LHDD--------LANILLDFKFEAKVADFGLAK--IASDVNT 232
LHD L N+LLD + K+ADFG+ K I + V T
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT 181
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I + +
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDR 133
Query: 199 AYLHDDLA--NILLDFKFEAKVADFGLAKI 226
+H DLA N+L+ K+ DFGLAK+
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLV-----FHLHGKGQPTMD 183
+F+ E++II+ + +++ ++ G T + ++YE++ N++++ F + K
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 184 WPTRIKIALGSA-KGLAYLHDDL---------ANILLDFKFEAKVADFGLAKIASD 229
IK + S +Y+H++ +NIL+D K++DFG ++ D
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 129 EFQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ +E+E++ + HK++++L+G T ++ + L +L + P M++
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 188 IK--------------IALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
I A+G+ YL H DLA N+L+ K+ADFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 226 IASDVNTHVST 236
++++ + T
Sbjct: 206 DINNIDYYKKT 216
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 100 GFSDANLLRQDG---FGYVHRGVL--PNGK-----------------EGEREFQAEVEII 137
G D LL + G FG V RG P+GK E +F EV +
Sbjct: 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 75
Query: 138 SRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKG 197
+ H++L+ L G +M V E +L+ L K Q T + A+ A+G
Sbjct: 76 HSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEG 133
Query: 198 LAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTH 233
+ YL H DLA N+LL + K+ DFGL + + H
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 100 GFSDANLLRQDG---FGYVHRGVL--PNGK-----------------EGEREFQAEVEII 137
G D LL + G FG V RG P+GK E +F EV +
Sbjct: 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 75
Query: 138 SRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKG 197
+ H++L+ L G +M V E +L+ L K Q T + A+ A+G
Sbjct: 76 HSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEG 133
Query: 198 LAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTH 233
+ YL H DLA N+LL + K+ DFGL + + H
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG--KGQPTMDWPTRIKI 190
E +I+++VH + +VSL + + LV + + +H++ + P P I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 191 ALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLA 224
GL +LH DL N+LLD +++D GLA
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG--KGQPTMDWPTRIKI 190
E +I+++VH + +VSL + + LV + + +H++ + P P I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 191 ALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLA 224
GL +LH DL N+LLD +++D GLA
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG--KGQPTMDWPTRIKI 190
E +I+++VH + +VSL + + LV + + +H++ + P P I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 191 ALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLA 224
GL +LH DL N+LLD +++D GLA
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG--KGQPTMDWPTRIKI 190
E +I+++VH + +VSL + + LV + + +H++ + P P I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 191 ALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLA 224
GL +LH DL N+LLD +++D GLA
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 100 GFSDANLLRQDG---FGYVHRGVL--PNGK-----------------EGEREFQAEVEII 137
G D LL + G FG V RG P+GK E +F EV +
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 138 SRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKG 197
+ H++L+ L G +M V E +L+ L K Q T + A+ A+G
Sbjct: 66 HSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEG 123
Query: 198 LAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTH 233
+ YL H DLA N+LL + K+ DFGL + + H
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 100 GFSDANLLRQDG---FGYVHRGVL--PNGK-----------------EGEREFQAEVEII 137
G D LL + G FG V RG P+GK E +F EV +
Sbjct: 10 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 69
Query: 138 SRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKG 197
+ H++L+ L G +M V E +L+ L K Q T + A+ A+G
Sbjct: 70 HSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEG 127
Query: 198 LAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTH 233
+ YL H DLA N+LL + K+ DFGL + + H
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 100 GFSDANLLRQDG---FGYVHRGVL--PNGK-----------------EGEREFQAEVEII 137
G D LL + G FG V RG P+GK E +F EV +
Sbjct: 10 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 69
Query: 138 SRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKG 197
+ H++L+ L G +M V E +L+ L K Q T + A+ A+G
Sbjct: 70 HSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEG 127
Query: 198 LAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTH 233
+ YL H DLA N+LL + K+ DFGL + + H
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 100 GFSDANLLRQDG---FGYVHRGVL--PNGK-----------------EGEREFQAEVEII 137
G D LL + G FG V RG P+GK E +F EV +
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 138 SRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKG 197
+ H++L+ L G +M V E +L+ L K Q T + A+ A+G
Sbjct: 66 HSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEG 123
Query: 198 LAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTH 233
+ YL H DLA N+LL + K+ DFGL + + H
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 119 VLPNGKE--GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHG 176
VL G E E E +I+ ++ + ++V L+G A + MLV E L L G
Sbjct: 370 VLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVG 428
Query: 177 KGQP-----TMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
K + + ++ + + + ++H +LA N+LL + AK++DFGL+K
Sbjct: 429 KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488
Query: 230 VNTHVSTRVMGTF 242
+++ + R G +
Sbjct: 489 DDSYYTARSAGKW 501
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E +I+ +V+ + +VSL Y LV + L FH++ GQ + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 193 GSAKGLAYLHDDL--------ANILLDFKFEAKVADFGLA 224
GL LH + NILLD +++D GLA
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E +I+ +V+ + +VSL Y LV + L FH++ GQ + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 193 GSAKGLAYLHDDL--------ANILLDFKFEAKVADFGLA 224
GL LH + NILLD +++D GLA
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 100 GFSDANLLRQDG---FGYVHRGVL--PNGK-----------------EGEREFQAEVEII 137
G D LL + G FG V RG P+GK E +F EV +
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 138 SRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKG 197
+ H++L+ L G +M V E +L+ L K Q T + A+ A+G
Sbjct: 66 HSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEG 123
Query: 198 LAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTH 233
+ YL H DLA N+LL + K+ DFGL + + H
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI--KI 190
E++++ + ++V G + + + + E + +L L G+ P +I K+
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 171
Query: 191 ALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
++ KGL YL H D+ +NIL++ + E K+ DFG++ I S N+ V TR
Sbjct: 172 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 229
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFG AK+
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFG AK+
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 32/141 (22%)
Query: 126 GERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQP--- 180
ERE +E+++++++ H+++V+L+G T L++E+ L+ +L K +
Sbjct: 90 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 149
Query: 181 ------------------TMDWPTRIKIALGSAKGLAYL------HDDLA--NILLDFKF 214
+ + + A AKG+ +L H DLA N+L+
Sbjct: 150 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK 209
Query: 215 EAKVADFGLAK-IASDVNTHV 234
K+ DFGLA+ I SD N V
Sbjct: 210 VVKICDFGLARDIMSDSNYVV 230
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 112 FGYVHRGVLPNGK-----------------EGEREFQAEVEIISRVHHKHLVSLVGYYTA 154
FG V+ GV N K + + +F +E I+ + H H+V L+G
Sbjct: 25 FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIE 83
Query: 155 GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA-- 206
++ E L +L + + ++ T + +L K +AYL H D+A
Sbjct: 84 EEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVR 142
Query: 207 NILLDFKFEAKVADFGLAKIASD 229
NIL+ K+ DFGL++ D
Sbjct: 143 NILVASPECVKLGDFGLSRYIED 165
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + ++++ L + K Q ++W +I AKG+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 134
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFG AK+
Sbjct: 135 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 112 FGYVHRGVLPNGK-----------------EGEREFQAEVEIISRVHHKHLVSLVGYYTA 154
FG V+ GV N K + + +F +E I+ + H H+V L+G
Sbjct: 37 FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIE 95
Query: 155 GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA-- 206
++ E L +L + + ++ T + +L K +AYL H D+A
Sbjct: 96 EEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVR 154
Query: 207 NILLDFKFEAKVADFGLAKIASD 229
NIL+ K+ DFGL++ D
Sbjct: 155 NILVASPECVKLGDFGLSRYIED 177
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 124 KEGEREFQAEVEIISR-VHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---Q 179
K+ E+ +E ++ + V H LV L + + V +++ L +HL + +
Sbjct: 79 KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE 138
Query: 180 PTMD-WPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVST 236
P + I ALG L ++ DL NILLD + + DFGL K + N+ ST
Sbjct: 139 PRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST 198
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 112 FGYVHRGVLPNGK-----------------EGEREFQAEVEIISRVHHKHLVSLVGYYTA 154
FG V+ GV N K + + +F +E I+ + H H+V L+G
Sbjct: 21 FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIE 79
Query: 155 GSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYL------HDDLA-- 206
++ E L +L + + ++ T + +L K +AYL H D+A
Sbjct: 80 EEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVR 138
Query: 207 NILLDFKFEAKVADFGLAKIASD 229
NIL+ K+ DFGL++ D
Sbjct: 139 NILVASPECVKLGDFGLSRYIED 161
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QPTMDWPT 186
+ E+ + + H H++ L + + ++V E+ N + + Q +
Sbjct: 55 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ 114
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVN 231
+I A+ +H DL N+LLD K+ADFGL+ I +D N
Sbjct: 115 QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 161
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ +HH ++VSL+ + LV+EF + L L D ++IKI L
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEF-MEKDLKKVLDENKTGLQD--SQIKIYL 125
Query: 193 GS-AKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+G+A+ LH DL N+L++ K+ADFGLA+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ +HH ++VSL+ + LV+EF + L L D ++IKI L
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEF-MEKDLKKVLDENKTGLQD--SQIKIYL 125
Query: 193 GS-AKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+G+A+ LH DL N+L++ K+ADFGLA+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QPTMDWPT 186
+ E+ + + H H++ L + + ++V E+ N + + Q +
Sbjct: 51 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ 110
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVN 231
+I A+ +H DL N+LLD K+ADFGL+ I +D N
Sbjct: 111 QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 157
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QPTMDWPT 186
+ E+ + + H H++ L + + ++V E+ N + + Q +
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ 120
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVN 231
+I A+ +H DL N+LLD K+ADFGL+ I +D N
Sbjct: 121 QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 167
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 132
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFG AK+
Sbjct: 133 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLN---NTLVFHLHGKGQPTMDWPT 186
+ E+ + + H H++ L + + ++V E+ N + +V Q +
Sbjct: 60 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ 119
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVN 231
+I A+ +H DL N+LLD K+ADFGL+ I +D N
Sbjct: 120 QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 137
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFG AK+
Sbjct: 138 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 36/156 (23%)
Query: 101 FSDANLLRQDGFGYVHRGV-LPNGKE-----------------GEREFQAEVEIISRVHH 142
F +L FG V++G+ +P G++ +E E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 143 KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK----GQPTMDWPTRIKIALGSAKGL 198
H+ L+G + +++ L + K Q ++W +I AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGM 130
Query: 199 AYLHD------DLA--NILLDFKFEAKVADFGLAKI 226
YL D DLA N+L+ K+ DFG AK+
Sbjct: 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 166
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI--KI 190
E++++ + ++V G + + + + E + +L L G+ P +I K+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 109
Query: 191 ALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
++ KGL YL H D+ +NIL++ + E K+ DFG++ I S N+ V TR
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI--KI 190
E++++ + ++V G + + + + E + +L L G+ P +I K+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 109
Query: 191 ALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
++ KGL YL H D+ +NIL++ + E K+ DFG++ I S N+ V TR
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI--KI 190
E++++ + ++V G + + + + E + +L L G+ P +I K+
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 136
Query: 191 ALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
++ KGL YL H D+ +NIL++ + E K+ DFG++ I S N+ V TR
Sbjct: 137 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI--KI 190
E++++ + ++V G + + + + E + +L L G+ P +I K+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 109
Query: 191 ALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
++ KGL YL H D+ +NIL++ + E K+ DFG++ I S N+ V TR
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 124 KEGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTM 182
K +RE E+ I + H+H+V G++ +V E +L+ LH + +
Sbjct: 57 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALT 115
Query: 183 DWPTRI---KIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA 224
+ R +I LG YLH + L N+ L+ E K+ DFGLA
Sbjct: 116 EPEARYYLRQIVLGCQ----YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 124 KEGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTM 182
K +RE E+ I + H+H+V G++ +V E +L+ LH + +
Sbjct: 57 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALT 115
Query: 183 DWPTRI---KIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA 224
+ R +I LG YLH + L N+ L+ E K+ DFGLA
Sbjct: 116 EPEARYYLRQIVLGCQ----YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 38/147 (25%)
Query: 111 GFGYVHRGV-LPNGK-----------------EGEREFQAEVEIISRVHHKHLVSLVGYY 152
FG V++G+ +P+G+ + +E E +++ V ++ L+G
Sbjct: 29 AFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGIC 88
Query: 153 TAGSQRMLVYEFVLNNTLVFHLHGK-----GQPTMDWPTRIKIALGSAKGLAYLHD---- 203
+ + LV + + L+ H+ Q ++W +I AKG++YL D
Sbjct: 89 LTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLEDVRLV 141
Query: 204 --DLA--NILLDFKFEAKVADFGLAKI 226
DLA N+L+ K+ DFGLA++
Sbjct: 142 HRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI--KI 190
E++++ + ++V G + + + + E + +L L G+ P +I K+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 109
Query: 191 ALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
++ KGL YL H D+ +NIL++ + E K+ DFG++ I S N+ V TR
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI--KI 190
E++++ + ++V G + + + + E + +L L G+ P +I K+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 109
Query: 191 ALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
++ KGL YL H D+ +NIL++ + E K+ DFG++ I S N+ V TR
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 124 KEGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTM 182
K +RE E+ I + H+H+V G++ +V E +L+ LH + +
Sbjct: 61 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALT 119
Query: 183 DWPTRI---KIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA 224
+ R +I LG YLH + L N+ L+ E K+ DFGLA
Sbjct: 120 EPEARYYLRQIVLGCQ----YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 124 KEGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTM 182
K +RE E+ I + H+H+V G++ +V E +L+ LH + +
Sbjct: 81 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALT 139
Query: 183 DWPTRI---KIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA 224
+ R +I LG YLH + L N+ L+ E K+ DFGLA
Sbjct: 140 EPEARYYLRQIVLGCQ----YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 124 KEGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTM 182
K +RE E+ I + H+H+V G++ +V E +L+ LH + +
Sbjct: 79 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALT 137
Query: 183 DWPTRI---KIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA 224
+ R +I LG YLH + L N+ L+ E K+ DFGLA
Sbjct: 138 EPEARYYLRQIVLGCQ----YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 32/137 (23%)
Query: 127 ERE-FQAEVEIISRV-HHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ----- 179
E+E +E++I+S + H+++V+L+G T G +++ E+ L+ L K +
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 180 ---PTMD---------WPTRIKIAL----GSAKGLAYL------HDDLA--NILLDFKFE 215
P D P ++ L A+G+A+L H D+A N+LL
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 196
Query: 216 AKVADFGLAK-IASDVN 231
AK+ DFGLA+ I +D N
Sbjct: 197 AKIGDFGLARDIMNDSN 213
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ I+ + H ++V L + +LV+E + + + L + ++ T L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLL 107
Query: 193 GSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAK 225
G+AY HD DL N+L++ + E K+ADFGLA+
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 124 KEGERE-FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTM 182
K +RE E+ I + H+H+V G++ +V E +L+ LH + +
Sbjct: 55 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL-ELHKRRKALT 113
Query: 183 DWPTRI---KIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA 224
+ R +I LG YLH + L N+ L+ E K+ DFGLA
Sbjct: 114 EPEARYYLRQIVLGCQ----YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 122 NGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGK 177
+E ++ E+EI++ H ++V L+G Y + ++ EF ++ ++ G
Sbjct: 47 KSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGL 106
Query: 178 GQPTMDWPTRIKI-ALGSAKGLAYLHDDL--ANILLDFKFEAKVADFGLA 224
+P + R + AL +H DL N+L+ + + ++ADFG++
Sbjct: 107 TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ I+ + H ++V L + +LV+E + + + L + ++ T L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLL 107
Query: 193 GSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAK 225
G+AY HD DL N+L++ + E K+ADFGLA+
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ I+ + H ++V L + +LV+E + + + L + ++ T L
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLL 107
Query: 193 GSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAK 225
G+AY HD DL N+L++ + E K+ADFGLA+
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 145 LVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI----KIALG----SAK 196
L L + + V E+V L++H+ G+ P + +IA+G +K
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSK 461
Query: 197 GLAYLHDDLANILLDFKFEAKVADFGLAK 225
G+ Y L N++LD + K+ADFG+ K
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 122 NGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGK 177
+E ++ E+EI++ H ++V L+G Y + ++ EF ++ ++ G
Sbjct: 55 KSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGL 114
Query: 178 GQPTMDWPTRIKI-ALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
+P + R + AL +H DL N+L+ + + ++ADFG++
Sbjct: 115 TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVF--HLHGKGQPTM--DWPTRI 188
E+ ++ + HK++V L + + LV+EF + + +G P + + ++
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
LG LH DL N+L++ E K+ADFGLA+
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 136 IISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSA 195
++S V H ++ + G + Q ++ +++ L F L K Q + P A
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQRFPN-PVAKFYAAEVC 116
Query: 196 KGLAYLHD------DLA--NILLDFKFEAKVADFGLAKIASDV 230
L YLH DL NILLD K+ DFG AK DV
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 11/144 (7%)
Query: 91 YEELARATDGFSDANLLRQDGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVG 150
+EEL G R G + + V+ + + + E++ +S + H LV+L
Sbjct: 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD 221
Query: 151 YYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYLHD------D 204
+ ++ +++YEF+ L F M ++ KGL ++H+ D
Sbjct: 222 AFEDDNEMVMIYEFMSGGEL-FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 280
Query: 205 LA--NILLDFKF--EAKVADFGLA 224
L NI+ K E K+ DFGL
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLT 304
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI--KI 190
E++++ + ++V G + + + + E + +L L G+ P +I K+
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 128
Query: 191 ALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
++ KGL YL H D+ +NIL++ + E K+ DFG++ I S N+ V TR
Sbjct: 129 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 186
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 121 PNGKEGERE-FQAEVEIISRVH-HKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG 178
P E RE + E I+ +V H H+++L+ Y + S LV++ + L +L K
Sbjct: 136 PEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV 195
Query: 179 QPTMDWPTRIKIALGSAKGLAY----LHDDLA--NILLDFKFEAKVADFGLA 224
+ I +L A + +H DL NILLD + +++DFG +
Sbjct: 196 ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI 190
Q E+ ++S+ ++ G Y ++ ++ E++ + + L +P T+I
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIAT 108
Query: 191 ALGSA-KGLAYLHDD--------LANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 241
L KGL YLH + AN+LL E K+ADFG+A +D +T V
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP 168
Query: 242 F 242
F
Sbjct: 169 F 169
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 11/144 (7%)
Query: 91 YEELARATDGFSDANLLRQDGFGYVHRGVLPNGKEGEREFQAEVEIISRVHHKHLVSLVG 150
+EEL G R G + + V+ + + + E++ +S + H LV+L
Sbjct: 56 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD 115
Query: 151 YYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYLHD------D 204
+ ++ +++YEF+ L F M ++ KGL ++H+ D
Sbjct: 116 AFEDDNEMVMIYEFMSGGEL-FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 174
Query: 205 LA--NILLDFKF--EAKVADFGLA 224
L NI+ K E K+ DFGL
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLT 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 30/138 (21%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLH-----GKG---- 178
R+ +E ++ +V+H H++ L G + +L+ E+ +L L G G
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 179 -----QPTMDWPTRIKIALGS--------AKGLAYL------HDDLA--NILLDFKFEAK 217
++D P + +G ++G+ YL H DLA NIL+ + K
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK 190
Query: 218 VADFGLAKIASDVNTHVS 235
++DFGL++ + +++V
Sbjct: 191 ISDFGLSRDVYEEDSYVK 208
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI 190
Q E+ ++S+ ++ G Y ++ ++ E++ + + L +P T+I
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIAT 128
Query: 191 ALGSA-KGLAYLHDD--------LANILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 241
L KGL YLH + AN+LL E K+ADFG+A +D +T V
Sbjct: 129 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP 188
Query: 242 F 242
F
Sbjct: 189 F 189
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 82 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA 139
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 130 FQAEVEIISRVHHKHLVSLV----GYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
F+ E + + ++H +V++ AG +V E+V TL +H +G T P
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 186 TR-IKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTHV-- 234
R I++ + + L + +H D+ ANIL+ KV DFG+A+ +D V
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 235 STRVMGT 241
+ V+GT
Sbjct: 176 TAAVIGT 182
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 145 LVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI----KIALG----SAK 196
L L + + V E+V L++H+ G+ P + +IA+G +K
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSK 140
Query: 197 GLAYLHDDLANILLDFKFEAKVADFGLAK 225
G+ Y L N++LD + K+ADFG+ K
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 82 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 83 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 184
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LSMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 83 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 184
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 82 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 82 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 85 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 142
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 186
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 82 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 11/60 (18%)
Query: 189 KIALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
K+++ +GLAYL H D+ +NIL++ + E K+ DFG++ I S N+ V TR
Sbjct: 118 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 177
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 80 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LSMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTL---VFHLHGKGQPTMDWPTRIK 189
E++I+ R H++++ + A + + +++ + + ++ L Q + D
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 190 IALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+ +GL Y LH DL +N+L++ + K+ DFGLA+IA + H
Sbjct: 151 YQI--LRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 41/160 (25%)
Query: 107 LRQDGFGYVHRGVLPNGKEGER-------------------EFQAEVEIISRVHHKHLVS 147
L +D FG V++G L GE+ EF+ E + +R+ H ++V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 148 LVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRIKIALGS--------- 194
L+G T +++ + L+ LV + D +K AL
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 195 -AKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
A G+ YL H DLA N+L+ K K++D GL +
Sbjct: 137 IAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 80 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 41/160 (25%)
Query: 107 LRQDGFGYVHRGVLPNGKEGER-------------------EFQAEVEIISRVHHKHLVS 147
L +D FG V++G L GE+ EF+ E + +R+ H ++V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 148 LVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRIKIALGS--------- 194
L+G T +++ + L+ LV + D +K AL
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 195 -AKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
A G+ YL H DLA N+L+ K K++D GL +
Sbjct: 154 IAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 193
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
EV ++ + H ++V+L LV+E+ L+ L +L G ++
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY-LDKDLKQYLDDCGNIINMHNVKL-FLF 107
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAKIAS 228
+GLAY LH DL N+L++ + E K+ADFGLA+ S
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKS 151
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 59 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 116
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 160
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 60 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 117
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 161
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 82 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LSMDLKDFMDASALTGIPLPLIKSYLF 113
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 80 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 80 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LSMDLKDFMDASALTGIPLPLIKSYLF 112
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ----PTMDWPTRI 188
E +++SR+ H V L + + + N L+ ++ G T + I
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 146
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 147 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 188
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPT 186
+ E +I+ V+H +V L + + L+ +F+ L L + T + +
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 133
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ +AL L ++ DL NILLD + K+ DFGL+K + D
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 27/154 (17%)
Query: 101 FSDANLLRQDGFGYVHRGVLPNGKE--------------GEREFQAEVEIISRVHHKHLV 146
F+ + + + FG V++G+ + KE + Q E+ ++S+ ++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 147 SLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSA-KGLAYLHDD- 204
G Y ++ ++ E++ + + L +P T I L KGL YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSER 136
Query: 205 -------LANILLDFKFEAKVADFGLAKIASDVN 231
AN+LL + + K+ADFG+A +D
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 170
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 57 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 114
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 158
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 58 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 115
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 159
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 142 HKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPT--RIKIALG----SA 195
H L + + V E++ L++H+ + + T +I LG +
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 196 KGLAYLHDDLANILLDFKFEAKVADFGLAK 225
KG+ Y L NILLD K+ADFG+ K
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 121 PNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQP 180
P+ KE + E+ I + + H+V G++ +V E +L+ LH + +
Sbjct: 67 PHQKE---KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKA 122
Query: 181 TMDWPTRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA-KIASD 229
+ R + +G+ YLH++ L N+ L+ + K+ DFGLA KI D
Sbjct: 123 VTEPEARY-FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD 179
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 79 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 180
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 126 GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
E F+A ++S++ HKHLV G G + +LV EFV +L +L K + ++
Sbjct: 56 SESFFEA-ASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINIL 113
Query: 186 TRIKIALGSAKGLAYLHDD 204
++++A A + +L ++
Sbjct: 114 WKLEVAKQLAAAMHFLEEN 132
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 142 HKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPT--RIKIALG----SA 195
H L + + V E++ L++H+ + + T +I LG +
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 196 KGLAYLHDDLANILLDFKFEAKVADFGLAK 225
KG+ Y L NILLD K+ADFG+ K
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 64 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 121
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 165
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVY--EFVLNNTLVFHLHGKGQ----PTMDWPT 186
E +++SR+ H V L Y+T L + + N L+ ++ G T +
Sbjct: 79 ERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
I AL G +H DL NILL+ ++ DFG AK+ S
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 180
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 30/138 (21%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLH-----GKG---- 178
R+ +E ++ +V+H H++ L G + +L+ E+ +L L G G
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 179 -----QPTMDWPTRIKIALGS--------AKGLAYL------HDDLA--NILLDFKFEAK 217
++D P + +G ++G+ YL H DLA NIL+ + K
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMK 190
Query: 218 VADFGLAKIASDVNTHVS 235
++DFGL++ + ++ V
Sbjct: 191 ISDFGLSRDVYEEDSXVK 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 30/138 (21%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLH-----GKG---- 178
R+ +E ++ +V+H H++ L G + +L+ E+ +L L G G
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 179 -----QPTMDWPTRIKIALGS--------AKGLAYL------HDDLA--NILLDFKFEAK 217
++D P + +G ++G+ YL H DLA NIL+ + K
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK 190
Query: 218 VADFGLAKIASDVNTHVS 235
++DFGL++ + ++ V
Sbjct: 191 ISDFGLSRDVYEEDSXVK 208
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 121 PNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQP 180
P+ KE + E+ I + + H+V G++ +V E +L+ LH + +
Sbjct: 83 PHQKE---KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKA 138
Query: 181 TMDWPTRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA-KIASD 229
+ R + +G+ YLH++ L N+ L+ + K+ DFGLA KI D
Sbjct: 139 VTEPEARY-FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD 195
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 121 PNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQP 180
P+ KE + E+ I + + H+V G++ +V E +L+ LH + +
Sbjct: 83 PHQKE---KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKA 138
Query: 181 TMDWPTRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA-KIASD 229
+ R + +G+ YLH++ L N+ L+ + K+ DFGLA KI D
Sbjct: 139 VTEPEARY-FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD 195
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYT------AGSQRMLVYEFVLNNTLVFHLHGKGQPTMD 183
F+ E + + ++H +V++ Y T AG +V E+V TL +H +G T
Sbjct: 59 FRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT-- 114
Query: 184 WPTR-IKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTHV 234
P R I++ + + L + +H D+ ANI++ KV DFG+A+ +D V
Sbjct: 115 -PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 235 --STRVMGT 241
+ V+GT
Sbjct: 174 TQTAAVIGT 182
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 121 PNGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQP 180
P+ KE + E+ I + + H+V G++ +V E +L+ LH + +
Sbjct: 83 PHQKE---KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKA 138
Query: 181 TMDWPTRIKIALGSAKGLAYLHDD--------LANILLDFKFEAKVADFGLA-KIASD 229
+ R + +G+ YLH++ L N+ L+ + K+ DFGLA KI D
Sbjct: 139 VTEPEARY-FMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD 195
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPT 186
+ E +I+ V+H +V L + + L+ +F+ L L + T + +
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 134
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ +AL L ++ DL NILLD + K+ DFGL+K + D
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 179
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 122 NGKEGEREFQAEVEIISRVH-HKHLVSLVGYYTAGSQR--MLVYEFVLNNTLVFHLHGKG 178
N + +R F+ E+ I++ + H+++V+L+ A + R LV++++ + LH
Sbjct: 48 NSTDAQRTFR-EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD-----LHAVI 101
Query: 179 QPTMDWPTRIK-IALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAK 225
+ + P + + K + YLH D+ +NILL+ + KVADFGL++
Sbjct: 102 RANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI 190
Q E+ ++S+ ++ G Y ++ ++ E++ + + L +P T+I
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIAT 123
Query: 191 ALGSA-KGLAYLHDD--------LANILLDFKFEAKVADFGLAKIASDVN 231
L KGL YLH + AN+LL E K+ADFG+A +D
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 124 KEGEREFQ-AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLV-FHLHGKGQPT 181
K+ RE EV I+ HH ++V + Y G + +V EF+ L H +
Sbjct: 82 KQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR---- 137
Query: 182 MDWPTRIKIALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFG-LAKIASDV 230
M+ + L + L+YLH+ D+ +ILL K++DFG A+++ +V
Sbjct: 138 MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 195
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPT 186
+ E +I+ V+H +V L + + L+ +F+ L L + T + +
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 133
Query: 187 RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASD 229
+ +AL L ++ DL NILLD + K+ DFGL+K + D
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVF--HLHGKGQPTM--DWPTRI 188
E+ ++ + HK++V L + + LV+EF + + +G P + + ++
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
LG LH DL N+L++ E K+A+FGLA+
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 130 FQAEVEIISRVHHKHLVSLV----GYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
F+ E + + ++H +V++ AG +V E+V TL +H +G T P
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 186 TR-IKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTHV-- 234
R I++ + + L + +H D+ ANI++ KV DFG+A+ +D V
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 235 STRVMGT 241
+ V+GT
Sbjct: 176 TAAVIGT 182
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+EF L+ L + + P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GL++ LH DL N+L++ + K+ADFGLA+
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI 190
Q E+ ++S+ ++ G Y ++ ++ E++ + + L +P T+I
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIAT 108
Query: 191 ALGSA-KGLAYLHDD--------LANILLDFKFEAKVADFGLAKIASDVN 231
L KGL YLH + AN+LL E K+ADFG+A +D
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 158
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 130 FQAEVEIISRVHHKHLVSLV----GYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
F+ E + + ++H +V++ AG +V E+V TL +H +G T P
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 186 TR-IKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTHV-- 234
R I++ + + L + +H D+ ANI++ KV DFG+A+ +D V
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 235 STRVMGT 241
+ V+GT
Sbjct: 176 TAAVIGT 182
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 130 FQAEVEIISRVHHKHLVSLV----GYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
F+ E + + ++H +V++ AG +V E+V TL +H +G T P
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 186 TR-IKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTHV-- 234
R I++ + + L + +H D+ ANI++ KV DFG+A+ +D V
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 235 STRVMGT 241
+ V+GT
Sbjct: 176 TAAVIGT 182
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI 190
+ E +I++ V+H +V L + + L+ +F+ L L + M +K
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 134
Query: 191 ALGS-AKGLAYLHD------DLA--NILLDFKFEAKVADFGLAKIASD 229
L A GL +LH DL NILLD + K+ DFGL+K A D
Sbjct: 135 YLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID 182
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 28/123 (22%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAG-------SQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
E EI V +H +++G+ A +Q L+ ++ N +L +L T+D
Sbjct: 79 ETEIYQTVLMRH-ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAK 134
Query: 186 TRIKIALGSAKGLAYLHDDL----------------ANILLDFKFEAKVADFGLA-KIAS 228
+ +K+A S GL +LH ++ NIL+ +AD GLA K S
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194
Query: 229 DVN 231
D N
Sbjct: 195 DTN 197
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 145 LVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYLHD- 203
L L + + V E+V L++H+ G+ P + A + GL +LH
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLFFLHKR 139
Query: 204 -------DLANILLDFKFEAKVADFGLAK 225
L N++LD + K+ADFG+ K
Sbjct: 140 GIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 20/83 (24%)
Query: 159 MLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYLHDDL------------- 205
+LV E+ N +L +L T DW + ++A +GLAYLH +L
Sbjct: 88 LLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHR 144
Query: 206 ----ANILLDFKFEAKVADFGLA 224
N+L+ ++DFGL+
Sbjct: 145 DLNSRNVLVKNDGTCVISDFGLS 167
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T ++ E L L + + ++D + I
Sbjct: 85 KFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLI 142
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 143 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T ++ E L L + + ++D + I
Sbjct: 62 KFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLI 119
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 120 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI--KI 190
E++++ + ++V G + + + + E + +L L G+ P +I K+
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKV 112
Query: 191 ALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLAK--IASDVNTHVSTR 237
++ KGL YL H D+ +NIL++ + E K+ DFG++ I N V TR
Sbjct: 113 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR 170
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T ++ E L L + + ++D + I
Sbjct: 60 KFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLI 117
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 118 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+E H+H + MD I L
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFE---------HVHQDLKTFMDASALTGIPL 101
Query: 193 GSAK--------GLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
K GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T ++ E L L + + ++D + I
Sbjct: 59 KFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLI 116
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 117 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 22/129 (17%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYT------AGSQRMLVYEFVLNNTLVFHLHGKGQPTMD 183
F+ E + + ++H +V++ Y T AG +V E+V TL +H +G T
Sbjct: 76 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT-- 131
Query: 184 WPTR-IKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTHV 234
P R I++ + + L + +H D+ ANI++ KV DFG+A+ +D V
Sbjct: 132 -PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 190
Query: 235 --STRVMGT 241
+ V+GT
Sbjct: 191 TQTAAVIGT 199
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
E++++ ++ H++LV+L+ + LV+EFV L++ +F Q + +I
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI 133
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+G +H D+ NIL+ K+ DFG A+
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T +++ L F K ++D + I
Sbjct: 54 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKY--SLDLASLI 111
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 112 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T ++ E L L + + ++D + I
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLI 114
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T ++ E L L + + ++D + I
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLI 114
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI 190
+ E+ I++++HH L++L + + +L+ EF+ L + + M I
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINY 154
Query: 191 ALGSAKGLAYLHD------DLA--NILLDFK--FEAKVADFGLA-KIASDVNTHVST 236
+ +GL ++H+ D+ NI+ + K K+ DFGLA K+ D V+T
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 211
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 83 GFSKSTFTYEELARATDG-----FSDANLLRQDGFGYVHRGVLPNGKEGE-----REFQA 132
G ++ YE +A +G F +L F + R + G+EG RE A
Sbjct: 5 GLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-A 63
Query: 133 EVEIISRVHHKHLVSLVGYYTAG-----SQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ + H ++V L T ++ LV+E V + L +L +P + T
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETI 122
Query: 188 IKIALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAKIAS 228
+ +GL +LH DL NIL+ + K+ADFGLA+I S
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 52 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 18/121 (14%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ + H+++V L ++ LV+EF+ N+ + + + P +++ L
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDND---LKKYMDSRTVGNTPRGLELNL 109
Query: 193 GS------AKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK-IASDVNTHVSTR 237
+GLA+ LH DL N+L++ + + K+ DFGLA+ VNT S
Sbjct: 110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 238 V 238
V
Sbjct: 170 V 170
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T +++ L F K ++D + I
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF--SLDLASLI 114
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T +++ L F K ++D + I
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF--SLDLASLI 114
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASD 229
A + LAYL H D+A N+L+ K+ DFGL++ D
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 30/136 (22%)
Query: 116 HRGVLPNGKEGEREFQAEVEIISRVHH-----KHLVSLVGYYTAGSQRMLVYEF---VLN 167
R VL NG + + I+ +H+ HL ++ YY G L+ +F +
Sbjct: 140 ERDVLVNG---------DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE 190
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ F++ + +A+ S L Y+H D+ N+LLD ++ADFG
Sbjct: 191 DMARFYI-----------GEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCL 239
Query: 226 IASDVNTHVSTRVMGT 241
+D T S+ +GT
Sbjct: 240 KMNDDGTVQSSVAVGT 255
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 141 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 132 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 83 GFSKSTFTYEELARATDG-----FSDANLLRQDGFGYVHRGVLPNGKEGE-----REFQA 132
G ++ YE +A +G F +L F + R + G+EG RE A
Sbjct: 5 GLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-A 63
Query: 133 EVEIISRVHHKHLVSLVGYYTAG-----SQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ + H ++V L T ++ LV+E V + L +L +P + T
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETI 122
Query: 188 IKIALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAKIAS 228
+ +GL +LH DL NIL+ + K+ADFGLA+I S
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 143 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 30/136 (22%)
Query: 116 HRGVLPNGKEGEREFQAEVEIISRVHH-----KHLVSLVGYYTAGSQRMLVYEF---VLN 167
R VL NG + + I+ +H+ HL ++ YY G L+ +F +
Sbjct: 124 ERDVLVNG---------DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE 174
Query: 168 NTLVFHLHGKGQPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ F++ + +A+ S L Y+H D+ N+LLD ++ADFG
Sbjct: 175 DMARFYI-----------GEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCL 223
Query: 226 IASDVNTHVSTRVMGT 241
+D T S+ +GT
Sbjct: 224 KMNDDGTVQSSVAVGT 239
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T +++ L F K ++D + I
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF--SLDLASLI 494
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 133 EVEIISRVH-HKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
EV+I+ +V H +++ L Y + LV++ + L +L K + +I A
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 192 L----GSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
L + L +H DL NILLD K+ DFG +
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 83 GFSKSTFTYEELARATDG-----FSDANLLRQDGFGYVHRGVLPNGKEGE-----REFQA 132
G ++ YE +A +G F +L F + R + G+EG RE A
Sbjct: 5 GLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-A 63
Query: 133 EVEIISRVHHKHLVSLVGYYTAG-----SQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTR 187
+ + H ++V L T ++ LV+E V + L +L +P + T
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETI 122
Query: 188 IKIALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFGLAKIAS 228
+ +GL +LH DL NIL+ + K+ADFGLA+I S
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 124 KEGEREFQAEVEIISRVHH-KHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTM 182
KE + +++++ + H ++V G + + + E L T L + Q +
Sbjct: 64 KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME--LMGTCAEKLKKRMQGPI 121
Query: 183 DWPTRI--KIALGSAKGLAYL-------HDDL--ANILLDFKFEAKVADFGLA 224
P RI K+ + K L YL H D+ +NILLD + + K+ DFG++
Sbjct: 122 --PERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 133 EVEIISRVH-HKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
EV+I+ +V H +++ L Y + LV++ + L +L K + +I A
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 192 L----GSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
L + L +H DL NILLD K+ DFG +
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 126 GEREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWP 185
E F+A ++S++ HKHLV G G + +LV EFV +L +L K + ++
Sbjct: 56 SESFFEA-ASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINIL 113
Query: 186 TRIKIALGSAKGLAYLHDD 204
++++A A + +L ++
Sbjct: 114 WKLEVAKQLAWAMHFLEEN 132
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 133 EVEIISRVH-HKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
EV+I+ +V H +++ L Y + LV++ + L +L K + +I A
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 192 L----GSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
L + L +H DL NILLD K+ DFG +
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+F E + + H H+V L+G T +++ L F K ++D + I
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF--SLDLASLI 494
Query: 189 KIALGSAKGLAYL------HDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTR 237
A + LAYL H D+A N+L+ K+ DFGL++ D + +++
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 551
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 120 LPNGKEG-EREFQAEVEIISRVH---HKHLVSLVGYY-TAGSQR----MLVYEFVLNNTL 170
+PNG+EG EV ++ R+ H ++V L+ T+ + R LV+E V + L
Sbjct: 39 VPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDL 97
Query: 171 VFHLHGKGQPTMDWPTRIKIALGSAKGLAYLHDDL--------ANILLDFKFEAKVADFG 222
+L P + T + +GL +LH + NIL+ K+ADFG
Sbjct: 98 RTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 157
Query: 223 LAKIAS 228
LA+I S
Sbjct: 158 LARIYS 163
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I + ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 52 IKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 120 LPNGKEG-EREFQAEVEIISRVH---HKHLVSLVGYY-TAGSQR----MLVYEFVLNNTL 170
+PNG+EG EV ++ R+ H ++V L+ T+ + R LV+E V + L
Sbjct: 39 VPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDL 97
Query: 171 VFHLHGKGQPTMDWPTRIKIALGSAKGLAYLHDDL--------ANILLDFKFEAKVADFG 222
+L P + T + +GL +LH + NIL+ K+ADFG
Sbjct: 98 RTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 157
Query: 223 LAKIAS 228
LA+I S
Sbjct: 158 LARIYS 163
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 50 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 109
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 110 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 152
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 194 SAKGLAYLHDDL--ANILLDFKFEAKVADFGLAKI 226
S G LH DL AN+ LD K K+ DFGLA+I
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTR 187
E ++ H L +L + + V E+ L FHL + + D +
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 188 IKIALG---SAKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
I AL S K + Y L N++LD K+ DFGL K
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTR 187
E ++ H L +L + + V E+ L FHL + + D +
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 188 IKIALG---SAKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
I AL S K + Y L N++LD K+ DFGL K
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 120 LPNGKEG-EREFQAEVEIISRVH---HKHLVSLVGYY-TAGSQR----MLVYEFVLNNTL 170
+PNG+EG EV ++ R+ H ++V L+ T+ + R LV+E V + L
Sbjct: 39 VPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDL 97
Query: 171 VFHLHGKGQPTMDWPTRIKIALGSAKGLAYLHDDL--------ANILLDFKFEAKVADFG 222
+L P + T + +GL +LH + NIL+ K+ADFG
Sbjct: 98 RTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 157
Query: 223 LAKIAS 228
LA+I S
Sbjct: 158 LARIYS 163
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIAL 192
E+ ++ ++H ++V L+ ++ LV+E V + L + + P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 193 GSAKGLAY------LHDDLA--NILLDFKFEAKVADFGLAK 225
+GLA+ LH DL N+L++ + K+ADFGLA+
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTR 187
E ++ H L +L + + V E+ L FHL + + D +
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 188 IKIALG---SAKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
I AL S K + Y L N++LD K+ DFGL K
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 194 SAKGLAYLHDDL--ANILLDFKFEAKVADFGLAKI 226
S G LH DL AN+ LD K K+ DFGLA+I
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 194 SAKGLAYLHDDL--ANILLDFKFEAKVADFGLAKI 226
S G LH DL AN+ LD K K+ DFGLA+I
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTR 187
E ++ H L +L + + V E+ L FHL + + D +
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 116
Query: 188 IKIALG---SAKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
I AL S K + Y L N++LD K+ DFGL K
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIK 189
+ E+E + + H+H+ L ++ +V E+ L ++ + + + + TR+
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE-ETRVV 113
Query: 190 I-----ALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGL-AKIASDVNTHVST 236
A+ Y H DL N+L D + K+ DFGL AK + + H+ T
Sbjct: 114 FRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTR 187
E ++ H L +L + + V E+ L FHL + + D +
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 188 IKIALG---SAKGLAYLHDDLANILLDFKFEAKVADFGLAK 225
I AL S K + Y L N++LD K+ DFGL K
Sbjct: 118 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + KVADFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 124 KEG-EREFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---- 178
KEG E + + E+EI + +HH +++ L Y+ + L+ E+ L L
Sbjct: 63 KEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE 122
Query: 179 QPTMDWPTRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFG 222
Q T + AL G +H D+ N+LL K E K+ADFG
Sbjct: 123 QRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 130 FQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGK-GQPTMDWPT-- 186
+ E+ I ++H+++V G+ G+ + L E+ L + G P D
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 187 -RIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKI 226
++ + G+ H D+ N+LLD + K++DFGLA +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 196 KGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIASDVNTH 233
+GL Y LH DL +N+LL+ + K+ DFGLA++A + H
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 201 LHDDL--ANILLDFKFEAKVADFGLAK-IASDVNTHV 234
+H DL AN LL+ K+ DFGLA+ I SD + H+
Sbjct: 153 IHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHI 189
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 32/110 (29%)
Query: 135 EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIALGS 194
++ SR L + Y+ GS +Y+F+ TL HL +++A+ +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGS----LYDFLQRQTLEPHLA------------LRLAVSA 114
Query: 195 AKGLAYLHDDL----------------ANILLDFKFEAKVADFGLAKIAS 228
A GLA+LH ++ N+L+ + +AD GLA + S
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHS 164
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 122 NGKEGEREFQAEVEIISRVHHKHLVSLVGYYTAGS------QRMLVYEFVLNNTL-VFHL 174
N +R ++ E+ ++ V+HK+++SL+ +T LV E + N V H+
Sbjct: 61 NQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM 119
Query: 175 HGKGQPTMDWPTRIKIALGSAKGLAYLHDDL--ANILLDFKFEAKVADFGLAKIAS 228
+ ++ + +H DL +NI++ K+ DFGLA+ AS
Sbjct: 120 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
E ++ H L +L + + V E+ L FHL + T +
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 116
Query: 192 LGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLAK 225
+ SA L YLH L N++LD K+ DFGL K
Sbjct: 117 IVSA--LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 37/181 (20%)
Query: 76 QSPGLSLGFSKSTFTYEELARATDG-FSDANLLRQDGFGY---VHRGVLPNGKEG-EREF 130
Q + F YE+LA+ G F + R G + + ++ N KEG
Sbjct: 5 QYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA 64
Query: 131 QAEVEIISRVHHKHLVSLVG--------YYTAGSQRMLVYEF-------VLNNTLVFHLH 175
E++I+ + H+++V+L+ Y + LV++F +L+N LV
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---- 120
Query: 176 GKGQPTMDWPTRIKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIA 227
+ T+ R+ L GL Y LH D+ AN+L+ K+ADFGLA+
Sbjct: 121 ---KFTLSEIKRVMQML--LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 228 S 228
S
Sbjct: 176 S 176
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
E ++ H L +L + + V E+ L FHL + T +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 192 LGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLAK 225
+ SA L YLH L N++LD K+ DFGL K
Sbjct: 114 IVSA--LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
E ++ H L +L + + V E+ L FHL + T +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 192 LGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLAK 225
+ SA L YLH L N++LD K+ DFGL K
Sbjct: 114 IVSA--LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
E ++ H L +L + + V E+ L FHL + T +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 192 LGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLAK 225
+ SA L YLH L N++LD K+ DFGL K
Sbjct: 114 IVSA--LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
E ++ H L +L + + V E+ L FHL + T +
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 118
Query: 192 LGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLAK 225
+ SA L YLH L N++LD K+ DFGL K
Sbjct: 119 IVSA--LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 27/121 (22%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAG-------SQRMLVYEFVLNNTLVFHLHGKGQ 179
ER + E EI V +H +++G+ A +Q LV ++ + +L +L+ +
Sbjct: 65 ERSWFREAEIYQTVMLRH-ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---R 120
Query: 180 PTMDWPTRIKIALGSAKGLAYLHDDLA----------------NILLDFKFEAKVADFGL 223
T+ IK+AL +A GLA+LH ++ NIL+ +AD GL
Sbjct: 121 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 180
Query: 224 A 224
A
Sbjct: 181 A 181
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 8/39 (20%)
Query: 195 AKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
AKG+ +L H DLA NILL K K+ DFGLA+
Sbjct: 201 AKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 8/39 (20%)
Query: 195 AKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
AKG+ +L H DLA NILL K K+ DFGLA+
Sbjct: 203 AKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + + EF N+ LV HL G K Q D
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 154
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 155 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 213
Query: 236 TR 237
TR
Sbjct: 214 TR 215
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
E ++ H L +L + + V E+ L FHL + T +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 192 LGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLAK 225
+ SA L YLH L N++LD K+ DFGL K
Sbjct: 114 IVSA--LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 27/121 (22%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAG-------SQRMLVYEFVLNNTLVFHLHGKGQ 179
ER + E EI V +H +++G+ A +Q LV ++ + +L +L+ +
Sbjct: 78 ERSWFREAEIYQTVMLRH-ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---R 133
Query: 180 PTMDWPTRIKIALGSAKGLAYLHDDLA----------------NILLDFKFEAKVADFGL 223
T+ IK+AL +A GLA+LH ++ NIL+ +AD GL
Sbjct: 134 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193
Query: 224 A 224
A
Sbjct: 194 A 194
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 8/39 (20%)
Query: 195 AKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
AKG+ +L H DLA NILL K K+ DFGLA+
Sbjct: 208 AKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 190 IALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIASDVNTHVSTRVMGT 241
IA+ S L Y+H D+ NIL+D ++ADFG + T S+ +GT
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 27/121 (22%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAG-------SQRMLVYEFVLNNTLVFHLHGKGQ 179
ER + E EI V +H +++G+ A +Q LV ++ + +L +L+ +
Sbjct: 42 ERSWFREAEIYQTVMLRH-ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---R 97
Query: 180 PTMDWPTRIKIALGSAKGLAYLHDDLA----------------NILLDFKFEAKVADFGL 223
T+ IK+AL +A GLA+LH ++ NIL+ +AD GL
Sbjct: 98 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 157
Query: 224 A 224
A
Sbjct: 158 A 158
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 8/39 (20%)
Query: 195 AKGLAYL------HDDLA--NILLDFKFEAKVADFGLAK 225
AKG+ +L H DLA NILL K K+ DFGLA+
Sbjct: 210 AKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 27/121 (22%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAG-------SQRMLVYEFVLNNTLVFHLHGKGQ 179
ER + E EI V +H +++G+ A +Q LV ++ + +L +L+ +
Sbjct: 45 ERSWFREAEIYQTVMLRH-ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---R 100
Query: 180 PTMDWPTRIKIALGSAKGLAYLHDDLA----------------NILLDFKFEAKVADFGL 223
T+ IK+AL +A GLA+LH ++ NIL+ +AD GL
Sbjct: 101 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 160
Query: 224 A 224
A
Sbjct: 161 A 161
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 27/121 (22%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAG-------SQRMLVYEFVLNNTLVFHLHGKGQ 179
ER + E EI V +H +++G+ A +Q LV ++ + +L +L+ +
Sbjct: 40 ERSWFREAEIYQTVMLRH-ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---R 95
Query: 180 PTMDWPTRIKIALGSAKGLAYLHDDLA----------------NILLDFKFEAKVADFGL 223
T+ IK+AL +A GLA+LH ++ NIL+ +AD GL
Sbjct: 96 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 155
Query: 224 A 224
A
Sbjct: 156 A 156
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E++ + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + KVADFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKIA 191
E ++ H L +L + + V E+ L FHL + T +
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 192 LGSAKGLAYLHD--------DLANILLDFKFEAKVADFGLAK 225
+ SA L YLH L N++LD K+ DFGL K
Sbjct: 114 IVSA--LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRI 188
+ + E I + H H+V L+ Y++ +V+EF+ L F + + + +
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 189 K--IALGSAKGLAYLHDD--------LANILLDFKFEA---KVADFGLA 224
+ L Y HD+ N+LL K + K+ DFG+A
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E++ + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + KVADFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 27/121 (22%)
Query: 127 EREFQAEVEIISRVHHKHLVSLVGYYTAG-------SQRMLVYEFVLNNTLVFHLHGKGQ 179
ER + E EI V +H +++G+ A +Q LV ++ + +L +L+ +
Sbjct: 39 ERSWFREAEIYQTVMLRH-ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---R 94
Query: 180 PTMDWPTRIKIALGSAKGLAYLHDDLA----------------NILLDFKFEAKVADFGL 223
T+ IK+AL +A GLA+LH ++ NIL+ +AD GL
Sbjct: 95 YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154
Query: 224 A 224
A
Sbjct: 155 A 155
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ +D T +V+
Sbjct: 133 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 236 TR 237
TR
Sbjct: 192 TR 193
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ +D T +V+
Sbjct: 133 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 236 TR 237
TR
Sbjct: 192 TR 193
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ +D T +V+
Sbjct: 133 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 236 TR 237
TR
Sbjct: 192 TR 193
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 31/131 (23%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQR----------------MLVYEFVLNNTLVFHLH 175
+EV +++ ++H+++V YY A +R + E+ N TL +H
Sbjct: 51 SEVMLLASLNHQYVVR---YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH 107
Query: 176 GKG---QPTMDWP--TRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
+ Q W +I AL +H DL NI +D K+ DFGLAK
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK--- 164
Query: 229 DVNTHVSTRVM 239
N H S ++
Sbjct: 165 --NVHRSLDIL 173
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I+ ++H ++V L L+ E+ + + LV H K + +I
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 120
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 37/181 (20%)
Query: 76 QSPGLSLGFSKSTFTYEELARATDG-FSDANLLRQDGFGY---VHRGVLPNGKEG-EREF 130
Q + F YE+LA+ G F + R G + + ++ N KEG
Sbjct: 5 QYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA 64
Query: 131 QAEVEIISRVHHKHLVSLVG--------YYTAGSQRMLVYEF-------VLNNTLVFHLH 175
E++I+ + H+++V+L+ Y LV++F +L+N LV
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---- 120
Query: 176 GKGQPTMDWPTRIKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIA 227
+ T+ R+ L GL Y LH D+ AN+L+ K+ADFGLA+
Sbjct: 121 ---KFTLSEIKRVMQML--LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 228 S 228
S
Sbjct: 176 S 176
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 37/181 (20%)
Query: 76 QSPGLSLGFSKSTFTYEELARATDG-FSDANLLRQDGFGY---VHRGVLPNGKEG-EREF 130
Q + F YE+LA+ G F + R G + + ++ N KEG
Sbjct: 5 QYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA 64
Query: 131 QAEVEIISRVHHKHLVSLVG--------YYTAGSQRMLVYEF-------VLNNTLVFHLH 175
E++I+ + H+++V+L+ Y LV++F +L+N LV
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---- 120
Query: 176 GKGQPTMDWPTRIKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIA 227
+ T+ R+ L GL Y LH D+ AN+L+ K+ADFGLA+
Sbjct: 121 ---KFTLSEIKRVMQML--LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 228 S 228
S
Sbjct: 176 S 176
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI-- 190
E++I+ H++++++ S +++ + LH M I+
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 191 -----ALGSAKGLAYLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
A+ G +H DL +N+L++ + KV DFGLA+I +
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI-- 190
E++I+ H++++++ S +++ + LH M I+
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 191 -----ALGSAKGLAYLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
A+ G +H DL +N+L++ + KV DFGLA+I +
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I+ ++H ++V L L+ E+ + + LV H K + +I
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 123
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMDWPTRIKI-- 190
E++I+ H++++++ S +++ + LH M I+
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 191 -----ALGSAKGLAYLHDDL--ANILLDFKFEAKVADFGLAKIASD 229
A+ G +H DL +N+L++ + KV DFGLA+I +
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 131 QAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQ-PTMDWPTRIK 189
+ E+ ++ R+ H +++ L + ++ LV E V L + KG D +K
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK 155
Query: 190 IALGSAKGLAYLHDDLANILLDFKFE------------AKVADFGLAKI 226
L + +AYLH++ + D K E K+ADFGL+KI
Sbjct: 156 QIL---EAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 149 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 207
Query: 236 TR 237
TR
Sbjct: 208 TR 209
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 138 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 236 TR 237
TR
Sbjct: 197 TR 198
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 138 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 236 TR 237
TR
Sbjct: 197 TR 198
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 137 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 195
Query: 236 TR 237
TR
Sbjct: 196 TR 197
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 128 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 236 TR 237
TR
Sbjct: 187 TR 188
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 128 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 236 TR 237
TR
Sbjct: 187 TR 188
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 37/181 (20%)
Query: 76 QSPGLSLGFSKSTFTYEELARATDG-FSDANLLRQDGFGY---VHRGVLPNGKEG-EREF 130
Q + F YE+LA+ G F + R G + + ++ N KEG
Sbjct: 4 QYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA 63
Query: 131 QAEVEIISRVHHKHLVSLVG--------YYTAGSQRMLVYEF-------VLNNTLVFHLH 175
E++I+ + H+++V+L+ Y LV++F +L+N LV
Sbjct: 64 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---- 119
Query: 176 GKGQPTMDWPTRIKIALGSAKGLAY------LHDDL--ANILLDFKFEAKVADFGLAKIA 227
+ T+ R+ L GL Y LH D+ AN+L+ K+ADFGLA+
Sbjct: 120 ---KFTLSEIKRVMQML--LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 174
Query: 228 S 228
S
Sbjct: 175 S 175
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 146 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 236 TR 237
TR
Sbjct: 205 TR 206
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 133 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 191
Query: 236 TR 237
TR
Sbjct: 192 TR 193
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 132 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 236 TR 237
TR
Sbjct: 191 TR 192
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 138 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 236 TR 237
TR
Sbjct: 197 TR 198
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 23/82 (28%)
Query: 170 LVFHLHGKGQ-------PTMDWPTRIKIALGSAKGLAYLHDDL----------------A 206
L+ H H G T+D + ++I L A GLA+LH ++
Sbjct: 112 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 171
Query: 207 NILLDFKFEAKVADFGLAKIAS 228
NIL+ + +AD GLA + S
Sbjct: 172 NILVKKNGQCCIADLGLAVMHS 193
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 146 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 204
Query: 236 TR 237
TR
Sbjct: 205 TR 206
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 145 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 236 TR 237
TR
Sbjct: 204 TR 205
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 31/131 (23%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQR----------------MLVYEFVLNNTLVFHLH 175
+EV +++ ++H+++V YY A +R + E+ N TL +H
Sbjct: 51 SEVMLLASLNHQYVVR---YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH 107
Query: 176 GKG---QPTMDWP--TRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
+ Q W +I AL +H DL NI +D K+ DFGLAK
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK--- 164
Query: 229 DVNTHVSTRVM 239
N H S ++
Sbjct: 165 --NVHRSLDIL 173
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 145 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 203
Query: 236 TR 237
TR
Sbjct: 204 TR 205
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 131 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 236 TR 237
TR
Sbjct: 190 TR 191
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 23/82 (28%)
Query: 170 LVFHLHGKGQ-------PTMDWPTRIKIALGSAKGLAYLHDDL----------------A 206
L+ H H G T+D + ++I L A GLA+LH ++
Sbjct: 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 142
Query: 207 NILLDFKFEAKVADFGLAKIAS 228
NIL+ + +AD GLA + S
Sbjct: 143 NILVKKNGQCCIADLGLAVMHS 164
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 124
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 125 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 183
Query: 236 TR 237
TR
Sbjct: 184 TR 185
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 124 KEGEREFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFH 173
K+ R FQ+ E+ ++ + H++++ L+ +T + EF N+ LV H
Sbjct: 58 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTH 112
Query: 174 LHG-------KGQPTMDWPTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKV 218
L G K Q D + I +GL Y+H DL +N+ ++ E K+
Sbjct: 113 LMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171
Query: 219 ADFGLAKIASDVNT-HVSTR 237
DFGLA+ D T +V+TR
Sbjct: 172 LDFGLARHTDDEMTGYVATR 191
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 124 KEGEREFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFH 173
K+ R FQ+ E+ ++ + H++++ L+ +T + EF N+ LV H
Sbjct: 53 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTH 107
Query: 174 LHG-------KGQPTMDWPTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKV 218
L G K Q D + I +GL Y+H DL +N+ ++ E K+
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 219 ADFGLAKIASDVNT-HVSTR 237
DFGLA+ D T +V+TR
Sbjct: 167 LDFGLARHTDDEMTGYVATR 186
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
Query: 124 KEGEREFQAEV---------EIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL 174
K+ R FQ+E+ ++ + H++++ L+ +T S Y+F L ++ +
Sbjct: 55 KKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL---VMPFM 111
Query: 175 HGKGQPTMDWP---TRIK-IALGSAKGLAYLHD------DLA--NILLDFKFEAKVADFG 222
Q M +I+ + KGL Y+H DL N+ ++ E K+ DFG
Sbjct: 112 QTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG 171
Query: 223 LAKIA-SDVNTHVSTR 237
LA+ A +++ +V TR
Sbjct: 172 LARHADAEMTGYVVTR 187
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 124 KEGEREFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFH 173
K+ R FQ+ E+ ++ + H++++ L+ +T + EF N+ LV H
Sbjct: 50 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTH 104
Query: 174 LHG-------KGQPTMDWPTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKV 218
L G K Q D + I +GL Y+H DL +N+ ++ E K+
Sbjct: 105 LMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 219 ADFGLAKIASDVNT-HVSTR 237
DFGLA+ D T +V+TR
Sbjct: 164 LDFGLARHTDDEMTGYVATR 183
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 135
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 136 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 194
Query: 236 TR 237
TR
Sbjct: 195 TR 196
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 128 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 236 TR 237
TR
Sbjct: 187 TR 188
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 124 KEGEREFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFH 173
K+ R FQ+ E+ ++ + H++++ L+ +T + EF N+ LV H
Sbjct: 51 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTH 105
Query: 174 LHG-------KGQPTMDWPTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKV 218
L G K Q D + I +GL Y+H DL +N+ ++ E K+
Sbjct: 106 LMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 164
Query: 219 ADFGLAKIASDVNT-HVSTR 237
DFGLA+ D T +V+TR
Sbjct: 165 LDFGLARHTDDEMTGYVATR 184
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 137 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 195
Query: 236 TR 237
TR
Sbjct: 196 TR 197
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 124 KEGEREFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFH 173
K+ R FQ+ E+ ++ + H++++ L+ +T + EF N+ LV H
Sbjct: 49 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTH 103
Query: 174 LHG-------KGQPTMDWPTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKV 218
L G K Q D + I +GL Y+H DL +N+ ++ E K+
Sbjct: 104 LMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 219 ADFGLAKIASDVNT-HVSTR 237
DFGLA+ D T +V+TR
Sbjct: 163 LDFGLARHTDDEMTGYVATR 182
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 124 KEGEREFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFH 173
K+ R FQ+ E+ ++ + H++++ L+ +T + EF N+ LV H
Sbjct: 50 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTH 104
Query: 174 LHG-------KGQPTMDWPTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKV 218
L G K Q D + I +GL Y+H DL +N+ ++ E K+
Sbjct: 105 LMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163
Query: 219 ADFGLAKIASDVNT-HVSTR 237
DFGLA+ D T +V+TR
Sbjct: 164 LDFGLARHTDDEMTGYVATR 183
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 23/82 (28%)
Query: 170 LVFHLHGKGQ-------PTMDWPTRIKIALGSAKGLAYLHDDL----------------A 206
L+ H H G T+D + ++I L A GLA+LH ++
Sbjct: 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 142
Query: 207 NILLDFKFEAKVADFGLAKIAS 228
NIL+ + +AD GLA + S
Sbjct: 143 NILVKKNGQCCIADLGLAVMHS 164
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I+ ++H ++V L LV E+ + + LV H K + +I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 124 KEGEREFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFH 173
K+ R FQ+ E+ ++ + H++++ L+ +T + EF N+ LV H
Sbjct: 49 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTH 103
Query: 174 LHG-------KGQPTMDWPTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKV 218
L G K Q D + I +GL Y+H DL +N+ ++ E K+
Sbjct: 104 LMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 219 ADFGLAKIASDVNT-HVSTR 237
DFGLA+ D T +V+TR
Sbjct: 163 LDFGLARHTDDEMTGYVATR 182
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I+ ++H ++V L LV E+ + + LV H K + +I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLV---FHLHGKGQPTMDW 184
R E+ ++ + H++++ L+ +T + E L TL+ + K Q D
Sbjct: 64 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDE 123
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ + +GL Y+H DL +N+ ++ E ++ DFGLA+ A + T +V+
Sbjct: 124 HVQF-LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVA 182
Query: 236 TR 237
TR
Sbjct: 183 TR 184
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I+ ++H ++V L LV E+ + + LV H K + +I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 132 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 236 TR 237
TR
Sbjct: 191 TR 192
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I+ ++H ++V L LV E+ + + LV H K + +I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I+ ++H ++V L LV E+ + + LV H K + +I
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 131 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 189
Query: 236 TR 237
TR
Sbjct: 190 TR 191
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL 174
+ + E I + H H+V L+ Y++ +V+EF+ L F +
Sbjct: 74 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI 119
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 129 EFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHL 174
+ + E I + H H+V L+ Y++ +V+EF+ L F +
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI 117
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 131 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 189
Query: 236 TR 237
TR
Sbjct: 190 TR 191
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 132 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 236 TR 237
TR
Sbjct: 191 TR 192
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKXQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I+ ++H ++V L LV E+ + + LV H K + +I
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 123
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLV---FHLHGKGQPTMDW 184
R E+ ++ + H++++ L+ +T + E L TL+ + K Q D
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDE 131
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ + +GL Y+H DL +N+ ++ E ++ DFGLA+ A + T +V+
Sbjct: 132 HVQF-LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA 190
Query: 236 TR 237
TR
Sbjct: 191 TR 192
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 132 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 190
Query: 236 TR 237
TR
Sbjct: 191 TR 192
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 128 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVA 186
Query: 236 TR 237
TR
Sbjct: 187 TR 188
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+ + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+++D + KV DFGLAK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKXQKLTDD 125
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D T +V+
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVA 184
Query: 236 TR 237
TR
Sbjct: 185 TR 186
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 31/131 (23%)
Query: 132 AEVEIISRVHHKHLVSLVGYYTAGSQR----------------MLVYEFVLNNTLVFHLH 175
+EV +++ ++H+++V YY A +R + E+ N TL +H
Sbjct: 51 SEVXLLASLNHQYVVR---YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH 107
Query: 176 GKG---QPTMDWP--TRIKIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAKIAS 228
+ Q W +I AL +H +L NI +D K+ DFGLAK
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAK--- 164
Query: 229 DVNTHVSTRVM 239
N H S ++
Sbjct: 165 --NVHRSLDIL 173
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 128 REFQAEVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLV---FHLHGKGQPTMDW 184
R E+ ++ + H++++ L+ +T + E L TL+ + K Q D
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDE 131
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASDVNT-HVS 235
+ + +GL Y+H DL +N+ ++ E ++ DFGLA+ A + T +V+
Sbjct: 132 HVQF-LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA 190
Query: 236 TR 237
TR
Sbjct: 191 TR 192
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1WYT|A Chain A, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Apo Form
pdb|1WYT|C Chain C, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Apo Form
pdb|1WYU|A Chain A, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Holo Form
pdb|1WYU|C Chain C, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Holo Form
pdb|1WYU|E Chain E, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Holo Form
pdb|1WYU|G Chain G, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Holo Form
pdb|1WYV|A Chain A, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Inhibitor-Bound Form
pdb|1WYV|C Chain C, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Inhibitor-Bound Form
pdb|1WYV|E Chain E, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Inhibitor-Bound Form
pdb|1WYV|G Chain G, Crystal Structure Of Glycine Decarboxylase (P-Protein) Of
The Glycine Cleavage System, In Inhibitor-Bound Form
Length = 438
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query: 75 PQSPGLSLGFSKSTFTYEELARATDGFSDANLLRQDGFGYVHRGVLPNGKEGEREFQAEV 134
P P +S G ++TF Y+ + G AN DG + GVL +E R V
Sbjct: 97 PYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGR---MGV 153
Query: 135 EIISRVHHKHLVSLVGYYTAGSQRML 160
+ VH ++ L Y A ++L
Sbjct: 154 LVSQGVHPEYRAVLRAYLEAVGAKLL 179
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFHLHG-------KGQPTMDW 184
E+ ++ + H++++ L+ +T + EF N+ LV HL G K Q D
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 185 PTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKVADFGLAKIASD-VNTHVS 235
+ I +GL Y+H DL +N+ ++ E K+ DFGLA+ D + +V+
Sbjct: 149 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVA 207
Query: 236 TR 237
TR
Sbjct: 208 TR 209
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 146 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 32/140 (22%)
Query: 124 KEGEREFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFH 173
K+ R FQ+ E+ ++ + H++++ L+ +T + EF N+ LV H
Sbjct: 53 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTH 107
Query: 174 LHG-------KGQPTMDWPTRIKIALGSAKGLAYLHD------DL--ANILLDFKFEAKV 218
L G K Q D + I +GL Y+H DL +N+ ++ E K+
Sbjct: 108 LMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 219 ADFGLAKIASDVNT-HVSTR 237
DFGLA+ D T V+TR
Sbjct: 167 LDFGLARHTDDEMTGXVATR 186
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I+ V+ LV L + S +V E+V + HL G+ + + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+++D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I ++H ++V L LV E+ + + LV H K + +I
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFV----LNNTLVFHLHGKGQPTMDWPTRI 188
EV I+ ++H ++V L LV E+ + + LV H K + +I
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI 115
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLA 224
A+ +H DL N+LLD K+ADFG +
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKGQPTMD----WPTRI 188
E I V+ LV L + S +V E+ + HL G+ + + +I
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + KVADFG AK
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|2D1G|A Chain A, Structure Of Francisella Tularensis Acid Phosphatase A
(Acpa) Bound To Orthovanadate
pdb|2D1G|B Chain B, Structure Of Francisella Tularensis Acid Phosphatase A
(Acpa) Bound To Orthovanadate
Length = 498
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 75 PQSPGLSLGFSKSTFTYEELARATDGFSDANLLRQDG--FGYVHRGVLPNGKEGE 127
P S G SKS T +A+ TDG++ + L Q G +G+ G P G+
Sbjct: 211 PYYDDCSYGTSKSGDTNTAVAKITDGYNIGHYLTQKGITWGWFQGGFKPTSYSGK 265
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 30/139 (21%)
Query: 124 KEGEREFQA---------EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNT-LVFH 173
K+ R FQ+ E+ ++ + H++++ L+ +T + EF N+ LV H
Sbjct: 49 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS---LEEF--NDVYLVTH 103
Query: 174 LHGKGQPTMDWPTRIK------IALGSAKGLAYLHD------DL--ANILLDFKFEAKVA 219
L G + ++ + +GL Y+H DL +N+ ++ E K+
Sbjct: 104 LMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL 163
Query: 220 DFGLAKIASDVNT-HVSTR 237
DFGLA+ D T +V+TR
Sbjct: 164 DFGLARHTDDEMTGYVATR 182
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 133 EVEIISRVHHKHLVSLVGYYTAGSQRMLVYEFVLNNTLVFHLHGKG---QP-TMDWPTRI 188
E I+ V+ LV L + S +V E+V + HL G +P + +I
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 189 KIALGSAKGLAYLHDDLA--NILLDFKFEAKVADFGLAK 225
+ L ++ DL N+L+D + +V DFG AK
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,465,192
Number of Sequences: 62578
Number of extensions: 241036
Number of successful extensions: 1609
Number of sequences better than 100.0: 732
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 516
Number of HSP's that attempted gapping in prelim test: 1126
Number of HSP's gapped (non-prelim): 738
length of query: 243
length of database: 14,973,337
effective HSP length: 96
effective length of query: 147
effective length of database: 8,965,849
effective search space: 1317979803
effective search space used: 1317979803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)