BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039408
(456 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 188/475 (39%), Positives = 264/475 (55%), Gaps = 48/475 (10%)
Query: 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALAT 61
K ++ I P +G+L +EFA LLTN D+ TV + P P ++Y+KS LA+
Sbjct: 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKS--VLAS 65
Query: 62 TTDAHNINFVYLPSVDPPSPDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDR 121
I + LP V+PP + KS Y+ F+E PHVK I ++ S++
Sbjct: 66 QP---QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTIL--------SNK 114
Query: 122 VAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFMLHFPNIDAQIANEFVESNTDFF 181
V GL +D FC SM DV N+ GIP YL+ S FL ML N QI F +S+ D
Sbjct: 115 VVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKN--RQIEEVFDDSDRDHQ 172
Query: 182 VPKDSTTELVIPSFANXXXXXXXXXXXXKRKRDGYVWYLRHAARYMETEGIVVNTFQELE 241
+ L IP +N K GY+ Y + A R+ +T+GI+VNTF +LE
Sbjct: 173 L-------LNIPGISNQVPSNVLPDACF-NKDGGYIAYYKLAERFRDTKGIIVNTFSDLE 224
Query: 242 PYAIESISVNG--MPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFG 299
+I+++ + +PP+Y +GP+LDL G D+ H+ I+KWLD+QP SVVFLCFG
Sbjct: 225 QSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFG 284
Query: 300 SMGSFVGP-QLREIAIGLQRVGFRFLWSIREPSKSKIYLPG--EYTNLKVKEML----PE 352
SMG GP Q+REIA+GL+ G RFLWS ++ K++ G E+ L+ K M+ P+
Sbjct: 285 SMGVSFGPSQIREIALGLKHSGVRFLWS--NSAEKKVFPEGFLEWMELEGKGMICGWAPQ 342
Query: 353 ----------GFLNRTAGVGL--SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLD 400
GF++ + S+W+GVPI TWP+YAEQQ+NAF LVKE + + +R+D
Sbjct: 343 VEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD 402
Query: 401 YRDGRGSDLVSAEEIEWGLRRLMDGDDXXXXXXXXXXXXSRTAVMEEGSSNKSLG 455
YR +GSD+V+AEEIE GL+ LMD D SR AV++ GSS S+G
Sbjct: 403 YR--KGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVG 455
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 304 bits (779), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 188/475 (39%), Positives = 264/475 (55%), Gaps = 48/475 (10%)
Query: 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALAT 61
K ++ I P +G+L +EFA LLTN D+ TV + P P ++Y+KS LA+
Sbjct: 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKS--VLAS 65
Query: 62 TTDAHNINFVYLPSVDPPSPDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDR 121
I + LP V+PP + KS Y+ F+E PHVK I ++ S++
Sbjct: 66 QP---QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTIL--------SNK 114
Query: 122 VAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFMLHFPNIDAQIANEFVESNTDFF 181
V GL +D FC SM DV N+ GIP YL+ S FL ML N QI F +S+ D
Sbjct: 115 VVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKN--RQIEEVFDDSDRDHQ 172
Query: 182 VPKDSTTELVIPSFANXXXXXXXXXXXXKRKRDGYVWYLRHAARYMETEGIVVNTFQELE 241
+ L IP +N K GY+ Y + A R+ +T+GI+VNTF +LE
Sbjct: 173 L-------LNIPGISNQVPSNVLPDACF-NKDGGYIAYYKLAERFRDTKGIIVNTFSDLE 224
Query: 242 PYAIESISVNG--MPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFG 299
+I+++ + +PP+Y +GP+LDL G D+ H+ I+KWLD+QP SVVFLCFG
Sbjct: 225 QSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFG 284
Query: 300 SMGSFVGP-QLREIAIGLQRVGFRFLWSIREPSKSKIYLPG--EYTNLKVKEML----PE 352
SMG GP Q+REIA+GL+ G RFLWS ++ K++ G E+ L+ K M+ P+
Sbjct: 285 SMGVSFGPSQIREIALGLKHSGVRFLWS--NSAEKKVFPEGFLEWMELEGKGMICGWAPQ 342
Query: 353 ----------GFLNRTAGVGL--SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLD 400
GF++ + S+W+GVPI TWP+YAEQQ+NAF LVKE + + +R+D
Sbjct: 343 VEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD 402
Query: 401 YRDGRGSDLVSAEEIEWGLRRLMDGDDXXXXXXXXXXXXSRTAVMEEGSSNKSLG 455
YR +GSD+V+AEEIE GL+ LMD D SR AV++ GSS S+G
Sbjct: 403 YR--KGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVG 455
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 216/463 (46%), Gaps = 73/463 (15%)
Query: 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALAT 61
K V +I +P MG+L+PLVEFA L + TV + E P A D+L +
Sbjct: 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHL---HGLTVTFVIAGEGPPSKAQRTVLDSLPS 61
Query: 62 TTDAHNINFVYLPSVDPPSPDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDR 121
+ I+ V+LP VD +SL + + P ++ + +E R
Sbjct: 62 S-----ISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE-------GGR 109
Query: 122 V-AGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFMLHFPNIDAQIANEFVESNTDF 180
+ L +D+F T DVA + +P Y+++ + A+ L F LH P +D ++ EF E
Sbjct: 110 LPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPL 169
Query: 181 FVPKDSTTELVIPSFANXXXXXXXXXXXXKRKRDGYVWYLRHAARYMETEGIVVNTFQEL 240
+P + F + RK D Y W L + RY E EGI+VNTF EL
Sbjct: 170 MLP--GCVPVAGKDFLDPAQ---------DRKDDAYKWLLHNTKRYKEAEGILVNTFFEL 218
Query: 241 EPYAIESISVNGM--PPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCF 298
EP AI+++ G+ PPVYP+GP++++ + + +KWLD+QP SV+++ F
Sbjct: 219 EPNAIKALQEPGLDKPPVYPVGPLVNI---GKQEAKQTEESECLKWLDNQPLGSVLYVSF 275
Query: 299 GSMGSFVGPQLREIAIGLQRVGFRFLWSIREPS--KSKIYLPGEYTNLKVKEMLPEGFLN 356
GS G+ QL E+A+GL RFLW IR PS + Y ++ LP GFL
Sbjct: 276 GSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYF-DSHSQTDPLTFLPPGFLE 334
Query: 357 RTAGVGL-------------------------------SLWYGVPIATWPLYAEQQMNAF 385
RT G S+ G+P+ WPLYAEQ+MNA
Sbjct: 335 RTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAV 394
Query: 386 ELVKELRLAVEIRLDYRDGRGSD-LVSAEEIEWGLRRLMDGDD 427
L +++R A+ R G D LV EE+ ++ LM+G++
Sbjct: 395 LLSEDIRAALRPR------AGDDGLVRREEVARVVKGLMEGEE 431
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 172/452 (38%), Gaps = 66/452 (14%)
Query: 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALAT 61
+K VV+I P G++ PL + A LL R F T + + ++ + + A
Sbjct: 7 RKPHVVMIPYPVQGHINPLFKLAKLL--HLRGFHITFVNTEYNHKRLLKS--RGPKAFDG 62
Query: 62 TTDAHNINFVYLPSVDPPSPDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDR 121
TD NF +P P + +L K +K L+ + S +
Sbjct: 63 FTD---FNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLK-PYCELLTRLNHSTNVPP 118
Query: 122 VAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFMLHFPNI----------DAQIAN 171
V L D + A + +P LYF+S A L ++HF + ++ + N
Sbjct: 119 VTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTN 178
Query: 172 EFVESNTDFFVPKDSTTELVIPSFANXXXXXXXXXXXXKRKRDGYV-WYLRHAARYMETE 230
+E+ D+ IP N D + +++ A R +
Sbjct: 179 GCLETKVDW-----------IPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDT 227
Query: 231 GIVVNTFQELEPYAIESISVNGMPPVYPIGPV------------LDLNGPAQWHPDRVHH 278
I++NTF ELE I ++S + +P +YPIGP+ LD W D
Sbjct: 228 TILLNTFNELESDVINALS-STIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDT--- 283
Query: 279 ESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREP--SKSKIY 336
+ WL+ + P SVV++ FGS QL E A GL FLW IR +
Sbjct: 284 -ECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVI 342
Query: 337 LPGEYTNLKVKEML-----PE----------GFLNRTA--GVGLSLWYGVPIATWPLYAE 379
E+TN L P+ GFL S+ GVP+ WP +A+
Sbjct: 343 FSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFAD 402
Query: 380 QQMNAFELVKELRLAVEIRLDYRDGRGSDLVS 411
Q + + E + +EI + + + L++
Sbjct: 403 QPTDCRFICNEWEIGMEIDTNVKREELAKLIN 434
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 231 GIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPP 290
+ +N+F + P IE+ + + +GP +L P + D ++WLD
Sbjct: 218 AVAINSFATIHPL-IENELNSKFKLLLNVGP-FNLTTPQRKVSDE---HGCLEWLDQHEN 272
Query: 291 SSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREPSKSKI---YLPGEYTNLKVK 347
SSVV++ FGS+ + +L +A L+ GF F+WS R K K+ +L T K+
Sbjct: 273 SSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTKGKIV 332
Query: 348 EMLPEGFLNRTAGVGLSLWY------------GVPIATWPLYAEQQMNAFELVKELRLAV 395
P+ + + + VG+ L + GVP+ + P + +Q +N +
Sbjct: 333 AWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNT--------ILT 384
Query: 396 EIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD 426
E L+ G + +++ E I+ L M +
Sbjct: 385 ESVLEIGVGVDNGVLTKESIKKALELTMSSE 415
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 50/200 (25%)
Query: 228 ETEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDD 287
+ + +N+F+EL+ + + + IGP +L P P+ ++WL +
Sbjct: 213 KATAVFINSFEELDDSLTNDLK-SKLKTYLNIGP-FNLITPPPVVPNTT---GCLQWLKE 267
Query: 288 QPPSSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVK 347
+ P+SVV++ FG++ + ++ ++ L+ F+WS+R+ K +
Sbjct: 268 RKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRD---------------KAR 312
Query: 348 EMLPEGFLNRTAGVGL--------------------------SLWY----GVPIATWPLY 377
LPEGFL +T G G+ SLW GVP+ P +
Sbjct: 313 VHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFF 372
Query: 378 AEQQMNAFELVKELRLAVEI 397
+Q++N + L + V I
Sbjct: 373 GDQRLNGRMVEDVLEIGVRI 392
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,073,574
Number of Sequences: 62578
Number of extensions: 532024
Number of successful extensions: 1093
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1061
Number of HSP's gapped (non-prelim): 8
length of query: 456
length of database: 14,973,337
effective HSP length: 102
effective length of query: 354
effective length of database: 8,590,381
effective search space: 3040994874
effective search space used: 3040994874
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)