Query 039408
Match_columns 456
No_of_seqs 172 out of 1308
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 09:23:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039408.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039408hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02207 UDP-glycosyltransfera 100.0 7.1E-64 1.5E-68 501.3 39.5 437 1-456 1-458 (468)
2 PLN03004 UDP-glycosyltransfera 100.0 4.1E-63 8.8E-68 494.3 37.2 421 1-453 1-451 (451)
3 PLN02410 UDP-glucoronosyl/UDP- 100.0 7.1E-63 1.5E-67 494.5 35.3 410 3-456 7-443 (451)
4 PLN02554 UDP-glycosyltransfera 100.0 9.5E-63 2.1E-67 500.3 36.1 434 1-455 1-470 (481)
5 PLN02167 UDP-glycosyltransfera 100.0 3E-62 6.5E-67 495.9 38.1 439 1-456 1-465 (475)
6 PLN03015 UDP-glucosyl transfer 100.0 1.8E-62 3.9E-67 489.2 34.8 417 1-456 1-461 (470)
7 PLN00164 glucosyltransferase; 100.0 2.2E-62 4.8E-67 495.8 35.7 425 1-455 1-465 (480)
8 PLN02863 UDP-glucoronosyl/UDP- 100.0 4.5E-62 9.8E-67 492.0 35.6 420 2-456 8-464 (477)
9 PLN02555 limonoid glucosyltran 100.0 1.2E-61 2.5E-66 487.4 37.0 423 3-456 7-462 (480)
10 PLN02992 coniferyl-alcohol glu 100.0 9E-62 2E-66 487.0 34.6 408 2-455 4-461 (481)
11 PLN02173 UDP-glucosyl transfer 100.0 1.8E-61 3.9E-66 482.2 36.2 403 3-456 5-441 (449)
12 PLN02152 indole-3-acetate beta 100.0 1.7E-61 3.7E-66 483.1 36.1 408 1-456 1-449 (455)
13 PLN02562 UDP-glycosyltransfera 100.0 6.9E-61 1.5E-65 481.5 36.1 411 3-456 6-442 (448)
14 PLN02534 UDP-glycosyltransfera 100.0 7.2E-61 1.6E-65 482.3 34.9 426 3-456 8-479 (491)
15 PLN02210 UDP-glucosyl transfer 100.0 5.1E-60 1.1E-64 475.6 35.7 411 3-456 8-448 (456)
16 PLN02448 UDP-glycosyltransfera 100.0 9.1E-60 2E-64 476.7 33.5 418 2-456 9-450 (459)
17 PLN02208 glycosyltransferase f 100.0 1.2E-58 2.6E-63 462.9 34.2 397 1-455 1-431 (442)
18 PLN03007 UDP-glucosyltransfera 100.0 5.6E-58 1.2E-62 465.9 35.6 425 2-456 4-473 (482)
19 PLN02670 transferase, transfer 100.0 7.7E-58 1.7E-62 458.2 34.6 405 3-442 6-448 (472)
20 PLN02764 glycosyltransferase f 100.0 1.1E-57 2.5E-62 453.5 34.5 398 3-455 5-437 (453)
21 PLN00414 glycosyltransferase f 100.0 1.1E-57 2.4E-62 456.5 34.3 390 2-451 3-430 (446)
22 PHA03392 egt ecdysteroid UDP-g 100.0 6.6E-36 1.4E-40 304.8 31.0 371 5-442 22-448 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 6.7E-39 1.4E-43 331.2 4.0 169 252-442 244-425 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 7.8E-36 1.7E-40 308.3 13.2 392 3-441 5-437 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 8.1E-34 1.8E-38 284.3 24.6 350 9-442 1-375 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 2E-33 4.4E-38 282.5 20.7 353 4-441 1-386 (401)
27 COG1819 Glycosyl transferases, 100.0 5E-30 1.1E-34 254.9 16.7 359 4-443 2-385 (406)
28 PRK12446 undecaprenyldiphospho 99.7 3E-15 6.6E-20 147.1 18.1 314 1-436 1-336 (352)
29 PF13528 Glyco_trans_1_3: Glyc 99.5 1.6E-12 3.5E-17 126.5 21.0 111 290-422 191-317 (318)
30 TIGR00661 MJ1255 conserved hyp 99.4 2.5E-12 5.4E-17 125.3 15.4 115 291-429 188-317 (321)
31 COG0707 MurG UDP-N-acetylgluco 99.3 4.3E-11 9.3E-16 116.7 17.8 312 5-436 2-338 (357)
32 PF03033 Glyco_transf_28: Glyc 99.2 3.3E-12 7.2E-17 108.5 3.3 124 6-152 1-131 (139)
33 cd03785 GT1_MurG MurG is an N- 99.1 2.6E-08 5.7E-13 98.1 22.5 60 364-433 268-331 (350)
34 PRK00726 murG undecaprenyldiph 99.1 1.9E-08 4.1E-13 99.6 20.2 64 364-437 268-335 (357)
35 TIGR00215 lpxB lipid-A-disacch 98.9 5.7E-08 1.2E-12 97.0 19.0 79 364-452 282-377 (385)
36 TIGR01133 murG undecaprenyldip 98.8 1.9E-06 4.2E-11 84.7 23.5 60 364-433 266-328 (348)
37 PRK13609 diacylglycerol glucos 98.6 3.1E-06 6.6E-11 84.6 19.7 127 290-432 201-344 (380)
38 PRK00025 lpxB lipid-A-disaccha 98.6 4.5E-06 9.8E-11 83.3 19.6 34 5-39 3-36 (380)
39 TIGR03590 PseG pseudaminic aci 98.1 9.2E-05 2E-09 70.5 14.6 91 292-386 171-278 (279)
40 cd03814 GT1_like_2 This family 98.1 0.0043 9.3E-08 60.6 26.9 55 364-434 286-340 (364)
41 PF04101 Glyco_tran_28_C: Glyc 98.0 2.3E-07 5E-12 81.3 -5.5 126 293-429 1-147 (167)
42 TIGR03492 conserved hypothetic 97.9 0.0064 1.4E-07 61.0 24.3 74 364-452 311-387 (396)
43 cd03800 GT1_Sucrose_synthase T 97.9 0.006 1.3E-07 60.8 24.0 50 364-429 322-371 (398)
44 cd03823 GT1_ExpE7_like This fa 97.9 0.01 2.2E-07 57.8 25.0 49 364-428 283-331 (359)
45 cd03818 GT1_ExpC_like This fam 97.8 0.039 8.4E-07 55.4 28.8 50 364-429 320-369 (396)
46 PLN02871 UDP-sulfoquinovose:DA 97.8 0.019 4.1E-07 59.0 26.2 51 364-430 351-404 (465)
47 cd03794 GT1_wbuB_like This fam 97.7 0.011 2.4E-07 57.9 22.5 51 364-430 319-369 (394)
48 PLN02605 monogalactosyldiacylg 97.7 0.012 2.5E-07 58.9 22.4 51 364-428 298-350 (382)
49 PRK05749 3-deoxy-D-manno-octul 97.4 0.067 1.4E-06 54.2 24.3 55 364-432 340-394 (425)
50 COG4671 Predicted glycosyl tra 97.4 0.046 1E-06 52.2 19.9 52 364-424 310-364 (400)
51 cd03817 GT1_UGDG_like This fam 97.3 0.18 4E-06 49.0 24.6 59 364-439 298-360 (374)
52 TIGR03449 mycothiol_MshA UDP-N 97.2 0.25 5.5E-06 49.5 25.9 52 364-431 322-373 (405)
53 TIGR02468 sucrsPsyn_pln sucros 97.1 0.31 6.7E-06 54.1 26.1 51 364-430 591-641 (1050)
54 cd03808 GT1_cap1E_like This fa 97.1 0.32 6.8E-06 46.8 24.0 35 6-42 2-36 (359)
55 cd03801 GT1_YqgM_like This fam 97.0 0.33 7.2E-06 46.7 24.9 51 364-430 295-345 (374)
56 cd03805 GT1_ALG2_like This fam 97.0 0.34 7.4E-06 48.2 23.9 48 364-428 319-366 (392)
57 PRK13608 diacylglycerol glucos 97.0 0.0018 3.9E-08 64.9 7.1 123 290-428 201-340 (391)
58 cd03820 GT1_amsD_like This fam 96.9 0.42 9.1E-06 45.7 24.5 57 364-436 272-329 (348)
59 PRK01021 lpxB lipid-A-disaccha 96.8 0.54 1.2E-05 49.0 22.9 82 364-449 503-594 (608)
60 COG3980 spsG Spore coat polysa 96.5 0.18 4E-06 46.8 15.6 61 364-435 242-302 (318)
61 PF06722 DUF1205: Protein of u 96.3 0.0036 7.8E-08 49.0 3.1 67 276-344 25-96 (97)
62 cd03821 GT1_Bme6_like This fam 96.3 1.2 2.6E-05 43.2 27.6 28 13-42 13-40 (375)
63 PF02684 LpxB: Lipid-A-disacch 96.1 1.2 2.6E-05 44.1 20.5 86 364-452 275-366 (373)
64 cd03798 GT1_wlbH_like This fam 96.1 1.4 3E-05 42.5 27.0 49 364-428 298-346 (377)
65 TIGR02472 sucr_P_syn_N sucrose 96.1 1.9 4.2E-05 43.8 23.8 50 364-429 360-409 (439)
66 cd03822 GT1_ecORF704_like This 96.0 1.6 3.5E-05 42.3 24.0 47 364-427 289-335 (366)
67 cd03811 GT1_WabH_like This fam 95.9 1.4 3.1E-05 42.0 20.2 35 6-42 2-38 (353)
68 cd04962 GT1_like_5 This family 95.4 3 6.5E-05 40.8 26.5 50 364-429 290-339 (371)
69 cd03825 GT1_wcfI_like This fam 95.0 3.7 7.9E-05 39.9 25.8 36 5-42 2-39 (365)
70 cd03819 GT1_WavL_like This fam 94.9 4 8.7E-05 39.6 27.6 50 364-428 284-333 (355)
71 KOG4626 O-linked N-acetylgluco 94.3 0.18 4E-06 51.6 8.2 106 290-398 757-888 (966)
72 COG1519 KdtA 3-deoxy-D-manno-o 94.0 0.92 2E-05 44.8 12.1 66 364-443 338-407 (419)
73 PF04007 DUF354: Protein of un 93.5 1.4 3E-05 43.0 12.4 107 11-152 7-113 (335)
74 PF13844 Glyco_transf_41: Glyc 93.1 0.31 6.7E-06 49.4 7.5 41 290-330 283-323 (468)
75 cd03816 GT1_ALG1_like This fam 92.7 1.9 4.1E-05 43.5 12.8 39 2-42 2-40 (415)
76 cd03804 GT1_wbaZ_like This fam 91.8 0.19 4E-06 49.3 4.1 119 296-433 199-334 (351)
77 PRK09814 beta-1,6-galactofuran 91.5 0.27 5.9E-06 48.0 4.9 62 364-442 256-318 (333)
78 cd03795 GT1_like_4 This family 91.5 0.81 1.8E-05 44.5 8.3 119 293-429 192-335 (357)
79 cd04946 GT1_AmsK_like This fam 90.0 1.6 3.5E-05 44.0 9.0 52 364-430 330-381 (407)
80 PRK02261 methylaspartate mutas 89.7 0.73 1.6E-05 38.6 5.3 42 1-44 1-42 (137)
81 PF13579 Glyco_trans_4_4: Glyc 89.0 0.77 1.7E-05 38.6 5.1 21 20-42 7-27 (160)
82 TIGR02470 sucr_synth sucrose s 88.7 6.8 0.00015 42.7 12.9 45 364-423 663-707 (784)
83 cd03786 GT1_UDP-GlcNAc_2-Epime 88.4 0.85 1.8E-05 44.9 5.6 122 290-430 197-341 (363)
84 cd03809 GT1_mtfB_like This fam 88.0 2.2 4.8E-05 41.3 8.3 56 364-437 292-347 (365)
85 cd03799 GT1_amsK_like This is 87.3 2.7 5.9E-05 40.7 8.5 49 364-428 281-329 (355)
86 PLN00142 sucrose synthase 87.0 4.6 9.9E-05 44.1 10.3 52 364-431 686-741 (815)
87 PRK10307 putative glycosyl tra 86.2 6.1 0.00013 39.6 10.5 48 364-427 327-374 (412)
88 PF13477 Glyco_trans_4_2: Glyc 85.3 11 0.00024 30.9 10.1 100 6-148 2-105 (139)
89 TIGR00236 wecB UDP-N-acetylglu 84.8 0.59 1.3E-05 46.2 2.3 69 364-453 289-357 (365)
90 COG1817 Uncharacterized protei 84.2 18 0.00039 34.5 11.4 111 8-152 4-114 (346)
91 PF12000 Glyco_trans_4_3: Gkyc 83.3 18 0.0004 31.5 10.6 43 101-149 52-95 (171)
92 cd03802 GT1_AviGT4_like This f 83.0 15 0.00033 35.0 11.4 44 364-424 264-307 (335)
93 COG3914 Spy Predicted O-linked 82.8 1.8 3.9E-05 44.4 4.6 42 289-330 427-468 (620)
94 PRK15427 colanic acid biosynth 80.9 7.5 0.00016 39.1 8.5 49 364-427 324-372 (406)
95 PF00534 Glycos_transf_1: Glyc 79.8 1.6 3.4E-05 37.6 2.8 55 364-434 112-166 (172)
96 PRK09922 UDP-D-galactose:(gluc 78.9 4.3 9.4E-05 39.9 6.0 49 364-428 277-326 (359)
97 PRK15484 lipopolysaccharide 1, 78.8 3.1 6.7E-05 41.4 4.9 52 364-430 297-348 (380)
98 cd05844 GT1_like_7 Glycosyltra 77.2 3.2 7E-05 40.5 4.5 49 364-428 290-338 (367)
99 PLN02275 transferase, transfer 77.1 63 0.0014 31.9 13.7 37 5-42 6-42 (371)
100 cd03796 GT1_PIG-A_like This fa 75.4 14 0.0003 36.9 8.6 26 15-42 15-40 (398)
101 PF13692 Glyco_trans_1_4: Glyc 74.8 4 8.6E-05 33.5 3.8 44 364-424 91-134 (135)
102 TIGR02149 glgA_Coryne glycogen 74.7 12 0.00026 36.9 7.9 55 364-428 300-354 (388)
103 PF01975 SurE: Survival protei 71.4 16 0.00034 32.7 6.9 24 18-43 14-37 (196)
104 cd03816 GT1_ALG1_like This fam 69.4 6.3 0.00014 39.8 4.5 45 364-426 337-381 (415)
105 PF13524 Glyco_trans_1_2: Glyc 69.4 8.1 0.00018 29.4 4.2 60 364-441 18-78 (92)
106 cd04949 GT1_gtfA_like This fam 69.2 6.7 0.00015 38.5 4.6 58 364-436 298-359 (372)
107 cd03807 GT1_WbnK_like This fam 68.3 8.3 0.00018 36.9 5.0 59 364-440 288-347 (365)
108 cd04951 GT1_WbdM_like This fam 67.3 4.5 9.7E-05 39.2 2.9 55 364-435 282-336 (360)
109 TIGR03088 stp2 sugar transfera 67.0 8.6 0.00019 37.8 4.8 49 364-428 292-340 (374)
110 cd03813 GT1_like_3 This family 65.9 9.8 0.00021 39.2 5.1 54 364-432 390-448 (475)
111 TIGR03087 stp1 sugar transfera 65.9 8.4 0.00018 38.5 4.5 49 364-430 318-366 (397)
112 cd02067 B12-binding B12 bindin 64.5 10 0.00022 30.6 4.0 36 5-42 1-36 (119)
113 PHA01633 putative glycosyl tra 62.9 9.7 0.00021 37.2 4.2 50 364-424 243-306 (335)
114 PF02142 MGS: MGS-like domain 62.5 25 0.00054 27.1 5.7 28 120-147 59-95 (95)
115 PRK10017 colanic acid biosynth 60.3 13 0.00028 37.7 4.6 66 364-441 342-412 (426)
116 COG0801 FolK 7,8-dihydro-6-hyd 60.0 18 0.00038 31.1 4.7 36 293-328 3-38 (160)
117 cd03806 GT1_ALG11_like This fa 58.9 82 0.0018 31.8 10.3 119 17-151 17-138 (419)
118 PRK15179 Vi polysaccharide bio 56.7 2.9E+02 0.0064 30.0 27.6 61 364-437 611-674 (694)
119 PLN02846 digalactosyldiacylgly 55.6 12 0.00026 38.3 3.5 39 2-42 3-46 (462)
120 cd03786 GT1_UDP-GlcNAc_2-Epime 55.4 1.5E+02 0.0033 28.7 11.4 32 9-42 4-36 (363)
121 COG4370 Uncharacterized protei 54.1 28 0.00061 33.1 5.3 65 359-434 317-387 (412)
122 PRK14089 ipid-A-disaccharide s 54.0 8 0.00017 38.0 1.9 80 364-451 250-338 (347)
123 cd04950 GT1_like_1 Glycosyltra 53.8 1.4E+02 0.003 29.4 10.9 25 16-42 18-42 (373)
124 cd03796 GT1_PIG-A_like This fa 52.6 54 0.0012 32.6 7.7 44 364-424 289-332 (398)
125 TIGR02193 heptsyl_trn_I lipopo 52.1 44 0.00095 32.1 6.8 117 283-423 171-319 (319)
126 cd03812 GT1_CapH_like This fam 52.1 13 0.00029 35.9 3.2 55 364-435 286-340 (358)
127 PRK10307 putative glycosyl tra 51.4 29 0.00063 34.7 5.6 36 5-42 2-41 (412)
128 PF13439 Glyco_transf_4: Glyco 51.4 14 0.00031 31.2 2.9 28 13-42 11-38 (177)
129 COG0381 WecB UDP-N-acetylgluco 51.3 85 0.0018 31.1 8.4 52 364-432 296-347 (383)
130 cd03812 GT1_CapH_like This fam 49.5 1.4E+02 0.0031 28.5 10.1 35 6-42 2-38 (358)
131 cd03807 GT1_WbnK_like This fam 49.2 1.5E+02 0.0032 28.0 10.1 34 7-42 5-38 (365)
132 cd02070 corrinoid_protein_B12- 49.2 32 0.00069 30.8 4.9 40 3-44 82-121 (201)
133 PF05225 HTH_psq: helix-turn-h 48.0 24 0.00053 23.0 2.9 27 411-437 1-27 (45)
134 PF02951 GSH-S_N: Prokaryotic 47.5 29 0.00064 28.2 3.9 36 5-42 2-40 (119)
135 TIGR02370 pyl_corrinoid methyl 46.7 35 0.00076 30.5 4.7 49 3-57 84-132 (197)
136 cd01840 SGNH_hydrolase_yrhL_li 46.1 52 0.0011 27.6 5.5 38 290-328 50-87 (150)
137 cd04951 GT1_WbdM_like This fam 46.1 21 0.00046 34.4 3.6 34 6-41 2-37 (360)
138 PF04413 Glycos_transf_N: 3-De 45.5 1.2E+02 0.0025 26.8 7.8 28 6-33 23-52 (186)
139 TIGR02990 ectoine_eutA ectoine 44.5 1E+02 0.0023 28.4 7.6 108 17-152 105-216 (239)
140 PF08660 Alg14: Oligosaccharid 43.9 2.2E+02 0.0047 24.7 10.9 20 8-27 2-21 (170)
141 PRK08760 replicative DNA helic 43.3 1.3E+02 0.0027 31.1 8.7 35 6-42 232-267 (476)
142 PF02350 Epimerase_2: UDP-N-ac 43.3 77 0.0017 31.1 7.0 126 289-432 178-324 (346)
143 PRK05595 replicative DNA helic 43.0 1.6E+02 0.0034 30.1 9.4 35 6-42 204-239 (444)
144 PRK08506 replicative DNA helic 42.9 2.2E+02 0.0047 29.3 10.4 36 6-43 195-230 (472)
145 PRK00654 glgA glycogen synthas 42.5 35 0.00075 35.0 4.6 37 5-43 2-44 (466)
146 PF02441 Flavoprotein: Flavopr 42.4 31 0.00067 28.3 3.5 35 5-42 2-36 (129)
147 PF02310 B12-binding: B12 bind 41.0 44 0.00096 26.7 4.2 35 5-41 2-36 (121)
148 cd03792 GT1_Trehalose_phosphor 40.6 39 0.00084 33.2 4.5 29 12-42 10-38 (372)
149 PRK05986 cob(I)alamin adenolsy 40.5 2.7E+02 0.0058 24.8 10.3 37 2-40 21-57 (191)
150 TIGR03087 stp1 sugar transfera 40.5 77 0.0017 31.5 6.7 30 10-42 9-39 (397)
151 COG2185 Sbm Methylmalonyl-CoA 39.6 48 0.001 27.9 4.1 38 1-40 10-47 (143)
152 PLN02949 transferase, transfer 39.3 4.4E+02 0.0096 27.0 13.8 130 6-152 35-170 (463)
153 COG0541 Ffh Signal recognition 38.5 2.4E+02 0.0052 28.6 9.3 41 5-47 102-142 (451)
154 PRK10867 signal recognition pa 38.3 2.2E+02 0.0049 28.9 9.4 37 5-43 102-139 (433)
155 TIGR03600 phage_DnaB phage rep 37.7 1.7E+02 0.0037 29.5 8.7 36 6-43 197-233 (421)
156 cd02069 methionine_synthase_B1 37.7 59 0.0013 29.5 4.8 40 3-44 88-127 (213)
157 PRK06321 replicative DNA helic 37.6 1.2E+02 0.0026 31.3 7.5 36 6-43 229-265 (472)
158 cd01635 Glycosyltransferase_GT 36.4 47 0.001 29.2 4.0 26 13-40 12-37 (229)
159 cd00984 DnaB_C DnaB helicase C 36.1 3.3E+02 0.0072 24.6 10.8 37 6-44 16-53 (242)
160 TIGR02918 accessory Sec system 35.4 42 0.0009 34.9 3.8 65 364-436 412-480 (500)
161 PF00448 SRP54: SRP54-type pro 34.1 2.7E+02 0.0059 24.7 8.4 37 6-44 4-40 (196)
162 cd03412 CbiK_N Anaerobic cobal 34.1 73 0.0016 26.1 4.4 37 292-328 2-40 (127)
163 PRK08305 spoVFB dipicolinate s 33.9 53 0.0011 29.4 3.7 39 2-42 4-42 (196)
164 PRK08006 replicative DNA helic 33.4 3.2E+02 0.007 28.1 9.9 36 6-43 227-263 (471)
165 PRK13935 stationary phase surv 33.4 3.7E+02 0.008 25.1 9.3 20 20-42 16-35 (253)
166 PRK14092 2-amino-4-hydroxy-6-h 33.2 83 0.0018 27.2 4.7 31 289-319 5-35 (163)
167 cd02071 MM_CoA_mut_B12_BD meth 33.2 2.6E+02 0.0056 22.5 11.0 38 5-44 1-38 (122)
168 PRK13932 stationary phase surv 32.8 3.8E+02 0.0082 25.1 9.3 36 3-42 5-40 (257)
169 TIGR02095 glgA glycogen/starch 32.5 62 0.0013 33.1 4.6 37 5-43 2-44 (473)
170 TIGR00087 surE 5'/3'-nucleotid 32.3 4.1E+02 0.0089 24.6 9.7 21 19-42 15-35 (244)
171 TIGR01425 SRP54_euk signal rec 31.9 3.3E+02 0.0072 27.6 9.4 36 5-42 102-137 (429)
172 TIGR02470 sucr_synth sucrose s 31.7 66 0.0014 35.3 4.7 29 120-148 384-414 (784)
173 PRK14099 glycogen synthase; Pr 31.6 90 0.0019 32.3 5.6 41 1-43 1-47 (485)
174 COG1618 Predicted nucleotide k 30.9 1.5E+02 0.0033 25.7 5.7 37 4-42 6-43 (179)
175 COG0041 PurE Phosphoribosylcar 30.9 3.4E+02 0.0074 23.2 8.2 77 364-447 76-155 (162)
176 COG1484 DnaC DNA replication p 30.9 77 0.0017 29.6 4.5 36 5-42 107-142 (254)
177 PF07355 GRDB: Glycine/sarcosi 30.5 1.1E+02 0.0023 30.0 5.3 29 120-148 79-117 (349)
178 PF12146 Hydrolase_4: Putative 30.5 91 0.002 23.1 4.0 28 5-32 17-44 (79)
179 PRK07313 phosphopantothenoylcy 30.4 53 0.0012 28.9 3.1 37 1-42 1-37 (182)
180 PRK06904 replicative DNA helic 30.0 2.2E+02 0.0048 29.3 8.0 36 6-43 224-260 (472)
181 PHA01630 putative group 1 glyc 29.9 30 0.00066 33.7 1.7 14 364-377 229-242 (331)
182 TIGR00665 DnaB replicative DNA 28.9 4.5E+02 0.0097 26.5 10.1 37 6-44 198-235 (434)
183 COG0496 SurE Predicted acid ph 28.7 3.6E+02 0.0078 25.1 8.3 20 20-42 16-35 (252)
184 TIGR03568 NeuC_NnaA UDP-N-acet 28.5 5.8E+02 0.013 25.1 11.6 115 291-424 201-338 (365)
185 TIGR00064 ftsY signal recognit 28.4 5E+02 0.011 24.4 9.6 36 5-42 74-109 (272)
186 PRK13933 stationary phase surv 28.3 5E+02 0.011 24.3 9.7 20 20-42 16-35 (253)
187 PLN00142 sucrose synthase 28.1 81 0.0018 34.7 4.6 30 120-149 407-438 (815)
188 cd01141 TroA_d Periplasmic bin 28.0 89 0.0019 27.1 4.3 37 105-149 61-99 (186)
189 KOG0780 Signal recognition par 27.8 3.6E+02 0.0079 27.0 8.4 39 5-45 103-141 (483)
190 TIGR00236 wecB UDP-N-acetylglu 27.7 3.9E+02 0.0084 26.0 9.2 34 6-41 3-36 (365)
191 TIGR00959 ffh signal recogniti 27.5 3.9E+02 0.0085 27.1 9.1 36 5-42 101-137 (428)
192 cd03789 GT1_LPS_heptosyltransf 27.5 71 0.0015 30.0 3.7 38 5-42 1-38 (279)
193 PLN02275 transferase, transfer 27.0 43 0.00094 33.0 2.3 43 364-423 329-371 (371)
194 PRK03359 putative electron tra 26.4 1.3E+02 0.0028 28.2 5.1 30 121-150 112-147 (256)
195 PRK09620 hypothetical protein; 26.2 90 0.0019 28.6 4.0 40 1-42 1-52 (229)
196 PRK05636 replicative DNA helic 26.2 3.9E+02 0.0084 27.8 9.0 35 6-42 268-303 (505)
197 PRK09165 replicative DNA helic 25.9 3E+02 0.0065 28.5 8.2 35 6-42 220-269 (497)
198 TIGR03568 NeuC_NnaA UDP-N-acet 25.6 5.7E+02 0.012 25.1 9.9 30 120-149 92-124 (365)
199 TIGR03713 acc_sec_asp1 accesso 25.6 55 0.0012 34.1 2.8 43 364-427 447-489 (519)
200 PRK07004 replicative DNA helic 25.6 4.9E+02 0.011 26.7 9.6 36 6-43 216-252 (460)
201 COG1519 KdtA 3-deoxy-D-manno-o 25.2 7.2E+02 0.016 25.1 10.7 28 6-33 51-80 (419)
202 cd03795 GT1_like_4 This family 25.0 1E+02 0.0022 29.5 4.5 28 13-42 13-40 (357)
203 PRK07773 replicative DNA helic 24.4 3.6E+02 0.0078 30.3 9.0 36 6-43 220-256 (886)
204 PF06180 CbiK: Cobalt chelatas 24.4 1.3E+02 0.0028 28.3 4.7 38 292-329 2-42 (262)
205 PRK10916 ADP-heptose:LPS hepto 24.3 1.2E+02 0.0026 29.6 4.8 38 5-42 2-39 (348)
206 PF04558 tRNA_synt_1c_R1: Glut 24.2 57 0.0012 28.2 2.1 33 380-426 101-133 (164)
207 PRK12342 hypothetical protein; 24.0 1.5E+02 0.0033 27.7 5.1 30 121-150 109-144 (254)
208 cd03806 GT1_ALG11_like This fa 23.7 75 0.0016 32.0 3.3 52 364-431 344-398 (419)
209 cd04955 GT1_like_6 This family 23.7 1.1E+02 0.0023 29.5 4.3 24 17-42 18-41 (363)
210 TIGR01498 folK 2-amino-4-hydro 23.5 75 0.0016 26.1 2.7 27 294-320 1-27 (127)
211 PRK04940 hypothetical protein; 23.4 1.6E+02 0.0034 26.0 4.7 33 121-153 60-93 (180)
212 PRK11889 flhF flagellar biosyn 23.2 5.8E+02 0.013 25.8 9.1 36 5-42 243-278 (436)
213 PF08323 Glyco_transf_5: Starc 22.6 65 0.0014 29.8 2.4 23 18-42 20-42 (245)
214 PF07894 DUF1669: Protein of u 22.5 1.5E+02 0.0033 28.0 4.8 45 99-149 132-181 (284)
215 TIGR01917 gly_red_sel_B glycin 22.3 1.8E+02 0.0038 29.3 5.3 29 120-148 75-113 (431)
216 PF10649 DUF2478: Protein of u 22.2 5.1E+02 0.011 22.3 8.5 112 7-151 2-132 (159)
217 TIGR01918 various_sel_PB selen 22.1 1.8E+02 0.0039 29.2 5.3 29 120-148 75-113 (431)
218 PRK06249 2-dehydropantoate 2-r 21.9 1E+02 0.0023 29.6 3.8 35 1-42 3-37 (313)
219 PF06925 MGDG_synth: Monogalac 21.8 2.3E+02 0.0049 24.3 5.6 24 16-39 1-25 (169)
220 cd03791 GT1_Glycogen_synthase_ 21.5 70 0.0015 32.7 2.6 50 364-424 390-441 (476)
221 cd03802 GT1_AviGT4_like This f 21.3 93 0.002 29.5 3.3 36 5-42 2-45 (335)
222 PRK04156 gltX glutamyl-tRNA sy 21.3 48 0.001 34.8 1.3 35 412-446 23-57 (567)
223 PRK06029 3-octaprenyl-4-hydrox 21.2 1.5E+02 0.0032 26.3 4.2 37 1-42 1-38 (185)
224 KOG0081 GTPase Rab27, small G 21.0 2.6E+02 0.0056 24.1 5.3 47 102-152 109-165 (219)
225 PF04127 DFP: DNA / pantothena 20.9 87 0.0019 27.7 2.7 21 20-42 32-52 (185)
226 PF02571 CbiJ: Precorrin-6x re 20.8 1.7E+02 0.0036 27.3 4.7 29 120-149 65-100 (249)
227 PF03853 YjeF_N: YjeF-related 20.8 2.4E+02 0.0053 24.3 5.5 31 5-38 27-57 (169)
228 PRK10239 2-amino-4-hydroxy-6-h 20.2 1.5E+02 0.0033 25.5 3.9 27 293-319 3-29 (159)
229 PF12179 IKKbetaNEMObind: I-ka 20.2 1E+02 0.0022 19.4 2.1 23 433-455 12-34 (38)
230 PRK10125 putative glycosyl tra 20.1 3.9E+02 0.0084 26.8 7.6 132 289-442 238-387 (405)
231 PRK13886 conjugal transfer pro 20.1 2.1E+02 0.0047 26.4 5.2 40 1-42 1-40 (241)
232 KOG2635 Medium subunit of clat 20.1 1.5E+02 0.0034 29.7 4.3 40 412-451 140-181 (512)
No 1
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=7.1e-64 Score=501.28 Aligned_cols=437 Identities=37% Similarity=0.692 Sum_probs=317.5
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCC-C
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDP-P 79 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-~ 79 (456)
|++.|++++|+|++||++||++||+.|+.+|-.+.|||++++.+.+.......++.. ...++|+|+.+|+... +
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~-----~~~~~i~~~~lp~~~~~~ 75 (468)
T PLN02207 1 MRNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIA-----SSQPFVRFIDVPELEEKP 75 (468)
T ss_pred CCCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhcc-----CCCCCeEEEEeCCCCCCC
Confidence 889999999999999999999999999998711449999987554222122222211 1123699999986431 2
Q ss_pred CCCCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHH
Q 039408 80 SPDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFM 159 (456)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 159 (456)
......+....+..++....+.+++.+.++++..+ ....+++|||+|.++.|+.++|+++|||+++|++++++.++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~ 153 (468)
T PLN02207 76 TLGGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLA--LDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMM 153 (468)
T ss_pred ccccccCHHHHHHHHHHhcchhHHHHHHHHHHHhc--cCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHH
Confidence 10111123333333444455555666777665311 0112359999999999999999999999999999999988888
Q ss_pred hhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEeccccc
Q 039408 160 LHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTFQE 239 (456)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 239 (456)
.+.+....... .++. ...+..+.+||++.+++.+++|.++.. ...+..+.+......+++++++||+++
T Consensus 154 ~~~~~~~~~~~--------~~~~-~~~~~~~~vPgl~~~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~~vlvNtf~~ 222 (468)
T PLN02207 154 QYLADRHSKDT--------SVFV-RNSEEMLSIPGFVNPVPANVLPSALFV--EDGYDAYVKLAILFTKANGILVNSSFD 222 (468)
T ss_pred HHhhhcccccc--------ccCc-CCCCCeEECCCCCCCCChHHCcchhcC--CccHHHHHHHHHhcccCCEEEEEchHH
Confidence 77654321110 0100 111233568998446888899876643 222455556666677899999999999
Q ss_pred ccHHHHHHHHc-CCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHHHHh
Q 039408 240 LEPYAIESISV-NGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGLQR 318 (456)
Q Consensus 240 le~~~~~~~~~-~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~ 318 (456)
||++.++++++ ...|++++|||++..............+.+|.+|||+++++|||||||||+..++.+++++++.+|+.
T Consensus 223 LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~ 302 (468)
T PLN02207 223 IEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLEL 302 (468)
T ss_pred HhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHH
Confidence 99999998864 34578999999986432110000001235799999999889999999999999999999999999999
Q ss_pred cCCeEEEEEeCCCC-CccCCCC-----ccccccccccCchh----------HHhhcCCcee--EEeeCcceecccccccc
Q 039408 319 VGFRFLWSIREPSK-SKIYLPG-----EYTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIATWPLYAEQ 380 (456)
Q Consensus 319 ~~~~~vw~~~~~~~-~~~~~~~-----~~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~~P~~~DQ 380 (456)
++++|||+++.... ....+|. .++|..+.+|+||. |++|+|.+++ |+++|||||+||+++||
T Consensus 303 ~~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ 382 (468)
T PLN02207 303 CQYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQ 382 (468)
T ss_pred CCCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccc
Confidence 99999999995311 1111332 24667778999985 8889888888 99999999999999999
Q ss_pred chhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC-CChHHHHHHHHHHHHHHHhhccCCCchhccCC
Q 039408 381 QMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD-GDDEVRKKVKEMREKSRTAVMEEGSSNKSLGS 456 (456)
Q Consensus 381 ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~-~~~~~r~~A~~l~~~~~~a~~~gGss~~~~~~ 456 (456)
+.||+++++.||+|+++..+...+. .+.+++++|+++|+++|. ++++||+||+++++++++|+.+||||++||++
T Consensus 383 ~~Na~~~~~~~gvGv~~~~~~~~~~-~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~ 458 (468)
T PLN02207 383 QLNAFLMVKELKLAVELKLDYRVHS-DEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEK 458 (468)
T ss_pred hhhHHHHHHHhCceEEEeccccccc-CCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 9999999987899998853211000 135799999999999995 25799999999999999999999999999863
No 2
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=4.1e-63 Score=494.30 Aligned_cols=421 Identities=30% Similarity=0.559 Sum_probs=306.5
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCC--CceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRD--RRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDP 78 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rG--H~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 78 (456)
|++.||+++|+|++||++||++||++|+.+| +.++||++++..+.. ..+...+... ...++|+|+.++++..
T Consensus 1 ~~~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~-~~~~~~~~~~-----~~~~~i~~~~lp~~~~ 74 (451)
T PLN03004 1 MGEEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPE-STATYISSVS-----SSFPSITFHHLPAVTP 74 (451)
T ss_pred CCCcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhh-hhhhhhcccc-----CCCCCeEEEEcCCCCC
Confidence 7888999999999999999999999999998 554555555432110 0011111110 1124699999986641
Q ss_pred -CCCCCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHH
Q 039408 79 -PSPDQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFL 156 (456)
Q Consensus 79 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 156 (456)
+.+... .+....+..+.....+.+.+.++++.. ..+++|||+|.++.|+.++|+++|||+++|++++++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-------~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~ 147 (451)
T PLN03004 75 YSSSSTSRHHHESLLLEILCFSNPSVHRTLFSLSR-------NFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACL 147 (451)
T ss_pred CCCccccccCHHHHHHHHHHhhhHHHHHHHHhcCC-------CCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHH
Confidence 122111 122223333344444455555554421 13569999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEecc
Q 039408 157 GFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNT 236 (456)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 236 (456)
+++++.+......... .+ . ....+.+||+| .++.+++|..+.......+..+.+......+++++++||
T Consensus 148 ~~~~~~~~~~~~~~~~------~~---~-~~~~v~iPg~p-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NT 216 (451)
T PLN03004 148 AFSFYLPTIDETTPGK------NL---K-DIPTVHIPGVP-PMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINT 216 (451)
T ss_pred HHHHHHHhcccccccc------cc---c-cCCeecCCCCC-CCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeee
Confidence 8888765322110000 00 0 11234678886 578888998765321222445555666677889999999
Q ss_pred cccccHHHHHHHHcCC-CCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHH
Q 039408 237 FQELEPYAIESISVNG-MPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIG 315 (456)
Q Consensus 237 ~~~le~~~~~~~~~~~-~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~a 315 (456)
|++||++++++++... .+++|+|||++......... ...+.+|.+|||+++++|||||||||+..++.+|+++++.|
T Consensus 217 f~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~--~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~g 294 (451)
T PLN03004 217 FDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRN--DNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVG 294 (451)
T ss_pred HHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccccc--cchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHH
Confidence 9999999999997633 36899999997432111001 11235699999999899999999999999999999999999
Q ss_pred HHhcCCeEEEEEeCCCC--C---cc--CCCC------ccccccccccCchh----------HHhhcCCcee--EEeeCcc
Q 039408 316 LQRVGFRFLWSIREPSK--S---KI--YLPG------EYTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVP 370 (456)
Q Consensus 316 l~~~~~~~vw~~~~~~~--~---~~--~~~~------~~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP 370 (456)
|+.++++|||+++.... . .. .+|. ...|+.+.+|+||. |++|+|.+++ |+++|||
T Consensus 295 L~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP 374 (451)
T PLN03004 295 LEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVP 374 (451)
T ss_pred HHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCC
Confidence 99999999999995310 0 00 0221 11577788999985 8888888888 9999999
Q ss_pred eeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHHhhccCCCc
Q 039408 371 IATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRTAVMEEGSS 450 (456)
Q Consensus 371 ~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a~~~gGss 450 (456)
||+||+++||+.||+++++.||+|++++.++ .+.+++++|+++|+++|. +++||+||+++++.+++|+++||||
T Consensus 375 ~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~-----~~~~~~e~l~~av~~vm~-~~~~r~~a~~~~~~a~~Av~~GGSS 448 (451)
T PLN03004 375 MVAWPLYAEQRFNRVMIVDEIKIAISMNESE-----TGFVSSTEVEKRVQEIIG-ECPVRERTMAMKNAAELALTETGSS 448 (451)
T ss_pred EEeccccccchhhHHHHHHHhCceEEecCCc-----CCccCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999998789999998521 136899999999999998 8999999999999999999999999
Q ss_pred hhc
Q 039408 451 NKS 453 (456)
Q Consensus 451 ~~~ 453 (456)
+++
T Consensus 449 ~~~ 451 (451)
T PLN03004 449 HTA 451 (451)
T ss_pred CCC
Confidence 875
No 3
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=7.1e-63 Score=494.50 Aligned_cols=410 Identities=22% Similarity=0.345 Sum_probs=302.3
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCC-
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSP- 81 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~- 81 (456)
+.||+++|+|++||++||++||+.|+.+|+ .|||++++.+.. +.. ....+|+|..+|++. |++
T Consensus 7 ~~HVvlvPfpaqGHi~P~l~LAk~La~~G~--~VT~v~T~~n~~-------~~~------~~~~~i~~~~ip~gl-p~~~ 70 (451)
T PLN02410 7 RRRVVLVPVPAQGHISPMMQLAKTLHLKGF--SITIAQTKFNYF-------SPS------DDFTDFQFVTIPESL-PESD 70 (451)
T ss_pred CCEEEEECCCccccHHHHHHHHHHHHcCCC--EEEEEeCccccc-------ccc------cCCCCeEEEeCCCCC-Cccc
Confidence 569999999999999999999999999994 599999874311 100 112369999998754 442
Q ss_pred CCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHHhh
Q 039408 82 DQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFMLH 161 (456)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 161 (456)
.+.......+..+...+.+.+++.++++..+ ...+++|||+|.++.|+.++|+++|||+++|++++++.++++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-----~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~ 145 (451)
T PLN02410 71 FKNLGPIEFLHKLNKECQVSFKDCLGQLVLQ-----QGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSV 145 (451)
T ss_pred ccccCHHHHHHHHHHHhHHHHHHHHHHHHhc-----cCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHH
Confidence 2221222233333334444555555554321 12467999999999999999999999999999999998887776
Q ss_pred ccccccccc-ccccccCCccccCCC--CCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEecccc
Q 039408 162 FPNIDAQIA-NEFVESNTDFFVPKD--STTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTFQ 238 (456)
Q Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 238 (456)
++.+...+. .+ + .. .+....+|+++ +++.+++|.............+.. .....+++++++|||+
T Consensus 146 ~~~~~~~~~~~~-------~---~~~~~~~~~~iPg~~-~~~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~~vlvNTf~ 213 (451)
T PLN02410 146 FDKLYANNVLAP-------L---KEPKGQQNELVPEFH-PLRCKDFPVSHWASLESIMELYRN-TVDKRTASSVIINTAS 213 (451)
T ss_pred HHHHHhccCCCC-------c---cccccCccccCCCCC-CCChHHCcchhcCCcHHHHHHHHH-HhhcccCCEEEEeChH
Confidence 543322111 01 0 10 11223578875 567777775432211111222222 2234678999999999
Q ss_pred cccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHHHHh
Q 039408 239 ELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGLQR 318 (456)
Q Consensus 239 ~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~ 318 (456)
+||+++++++++...+++++|||++.......+ ......+|.+|||+++++|||||||||+..++.+++++++.||+.
T Consensus 214 eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~--~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~ 291 (451)
T PLN02410 214 CLESSSLSRLQQQLQIPVYPIGPLHLVASAPTS--LLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDS 291 (451)
T ss_pred HhhHHHHHHHHhccCCCEEEecccccccCCCcc--ccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHh
Confidence 999999999987555789999999754221100 012335689999999889999999999999999999999999999
Q ss_pred cCCeEEEEEeCCC-CC-c--cCCCC-----ccccccccccCchh----------HHhhcCCcee--EEeeCcceeccccc
Q 039408 319 VGFRFLWSIREPS-KS-K--IYLPG-----EYTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIATWPLY 377 (456)
Q Consensus 319 ~~~~~vw~~~~~~-~~-~--~~~~~-----~~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~~P~~ 377 (456)
++++|||+++.+. .+ . ..+|. .++|.++.+|+||. |++|+|.+++ |+++|||||+||++
T Consensus 292 s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~ 371 (451)
T PLN02410 292 SNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFS 371 (451)
T ss_pred cCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEecccc
Confidence 9999999999531 11 0 01342 34677888999985 7788777777 99999999999999
Q ss_pred cccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHhhccCCCchhccC
Q 039408 378 AEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD--DEVRKKVKEMREKSRTAVMEEGSSNKSLG 455 (456)
Q Consensus 378 ~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~r~~A~~l~~~~~~a~~~gGss~~~~~ 455 (456)
+||+.||+++++.||+|+.+. +.+++++|+++|+++|.++ ++||+||+++++++++|+++||||++||+
T Consensus 372 ~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~ 442 (451)
T PLN02410 372 SDQKVNARYLECVWKIGIQVE---------GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLE 442 (451)
T ss_pred ccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 999999999999999999997 3689999999999999732 48999999999999999999999999986
Q ss_pred C
Q 039408 456 S 456 (456)
Q Consensus 456 ~ 456 (456)
+
T Consensus 443 ~ 443 (451)
T PLN02410 443 E 443 (451)
T ss_pred H
Confidence 3
No 4
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.5e-63 Score=500.26 Aligned_cols=434 Identities=43% Similarity=0.759 Sum_probs=313.9
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhh--HHhhhhhhccccCCCCCceEEEeCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIV--NAYVKSRDALATTTDAHNINFVYLPSVDP 78 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 78 (456)
|| .||+++|+|++||++||++||++|+.+|++++|||++++.+..... ...+++.. ....++|+|+.++++..
T Consensus 1 ~~-~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~lp~~~~ 75 (481)
T PLN02554 1 MK-IELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLS----ASSEDRLRYEVISAGDQ 75 (481)
T ss_pred Cc-eEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcc----cCCCCCeEEEEcCCCCC
Confidence 44 5999999999999999999999999998447799999874432110 01112111 01123699999987652
Q ss_pred CCCCCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHH
Q 039408 79 PSPDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGF 158 (456)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 158 (456)
+. .. .. .+..++..+.+.+++.++++++.... +...+++|||+|.++.|+.++|+++|||++.|++++++.+++
T Consensus 76 ~~-~~--~~--~~~~~~~~~~~~~~~~l~~l~~~~~~-~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~ 149 (481)
T PLN02554 76 PT-TE--DP--TFQSYIDNQKPKVRDAVAKLVDDSST-PSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGL 149 (481)
T ss_pred Cc-cc--ch--HHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHH
Confidence 21 11 11 22234455556777777776542000 011235899999999999999999999999999999999999
Q ss_pred HhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEecccc
Q 039408 159 MLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTFQ 238 (456)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 238 (456)
+++++........++ ..+ .+....+.+||++.+++..++|..+.. ......+.+......+++++++|||+
T Consensus 150 ~~~~~~~~~~~~~~~----~~~---~~~~~~v~iPgl~~pl~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~gvlvNt~~ 220 (481)
T PLN02554 150 QLHVQMLYDEKKYDV----SEL---EDSEVELDVPSLTRPYPVKCLPSVLLS--KEWLPLFLAQARRFREMKGILVNTVA 220 (481)
T ss_pred HHhhhhhccccccCc----ccc---CCCCceeECCCCCCCCCHHHCCCcccC--HHHHHHHHHHHHhcccCCEEEEechH
Confidence 888765432211110 001 111123568998546777888865543 23344555666667789999999999
Q ss_pred cccHHHHHHHHcC--CCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHHH
Q 039408 239 ELEPYAIESISVN--GMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGL 316 (456)
Q Consensus 239 ~le~~~~~~~~~~--~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~al 316 (456)
+||+++..++.+. ..+++++|||++......... ....+.+|.+|||+++++|||||||||+..++.+++++++.+|
T Consensus 221 eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~-~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l 299 (481)
T PLN02554 221 ELEPQALKFFSGSSGDLPPVYPVGPVLHLENSGDDS-KDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIAL 299 (481)
T ss_pred HHhHHHHHHHHhcccCCCCEEEeCCCcccccccccc-ccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHH
Confidence 9999999999863 347899999994322211000 0134568999999998889999999999999999999999999
Q ss_pred HhcCCeEEEEEeCCCC-------C-----ccCCCC-----ccccccccccCchh----------HHhhcCCcee--EEee
Q 039408 317 QRVGFRFLWSIREPSK-------S-----KIYLPG-----EYTNLKVKEMLPEG----------FLNRTAGVGL--SLWY 367 (456)
Q Consensus 317 ~~~~~~~vw~~~~~~~-------~-----~~~~~~-----~~~n~~~~~~lP~~----------f~~~~g~~G~--al~~ 367 (456)
+.++++|||+++.... + ...+|. ..+|+++.+|+||. |++|+|.+++ |+++
T Consensus 300 ~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~ 379 (481)
T PLN02554 300 ERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWF 379 (481)
T ss_pred HHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHc
Confidence 9999999999986310 0 001232 23566778999985 8888888787 9999
Q ss_pred CcceeccccccccchhHHHHHHhhcceEEecccccCC---CCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHHhh
Q 039408 368 GVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDG---RGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRTAV 444 (456)
Q Consensus 368 GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~---~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a~ 444 (456)
|||||+||+++||+.||+++++.||+|+.+.+....+ ++.+.+++++|+++|+++|.++++||+||+++++++++|+
T Consensus 380 GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av 459 (481)
T PLN02554 380 GVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVAL 459 (481)
T ss_pred CCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999977665679999997421000 0014689999999999999646899999999999999999
Q ss_pred ccCCCchhccC
Q 039408 445 MEEGSSNKSLG 455 (456)
Q Consensus 445 ~~gGss~~~~~ 455 (456)
.+||||++||+
T Consensus 460 ~~gGss~~~l~ 470 (481)
T PLN02554 460 MDGGSSHTALK 470 (481)
T ss_pred cCCChHHHHHH
Confidence 99999999986
No 5
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3e-62 Score=495.89 Aligned_cols=439 Identities=42% Similarity=0.740 Sum_probs=309.3
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCce-EEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRF-CATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPP 79 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~-~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 79 (456)
||+.||+++|+|++||++||++||+.|+.+|..+ .||++++..+.....+..++... ...++|+|+.+|++..+
T Consensus 1 ~~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~-----~~~~~i~~~~lp~~~~p 75 (475)
T PLN02167 1 KKEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLI-----ASEPRIRLVTLPEVQDP 75 (475)
T ss_pred CCccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcc-----cCCCCeEEEECCCCCCC
Confidence 7899999999999999999999999999998432 36666654332211112222211 11246999999876433
Q ss_pred CCCCC--CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHH
Q 039408 80 SPDQY--KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLG 157 (456)
Q Consensus 80 ~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 157 (456)
++.+. ......+..++..+.+.+++.++++....+. ....+++|||+|.++.|+.++|+++|||+++|++++++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~-~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~ 154 (475)
T PLN02167 76 PPMELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDE-SDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLG 154 (475)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccc-cCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHH
Confidence 22211 1121233334445556667777666532000 00124699999999999999999999999999999999888
Q ss_pred HHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEeccc
Q 039408 158 FMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTF 237 (456)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~ 237 (456)
++++.+........ .+.. ...+..+.+||++..++..++|..+.. ...+..+.+.+....+++++++|||
T Consensus 155 ~~~~~~~~~~~~~~-------~~~~-~~~~~~~~iPgl~~~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~a~~vlvNTf 224 (475)
T PLN02167 155 MMKYLPERHRKTAS-------EFDL-SSGEEELPIPGFVNSVPTKVLPPGLFM--KESYEAWVEIAERFPEAKGILVNSF 224 (475)
T ss_pred HHHHHHHhcccccc-------cccc-CCCCCeeECCCCCCCCChhhCchhhhC--cchHHHHHHHHHhhcccCEeeeccH
Confidence 88766532211000 0100 001123568998546777888865543 2224445566666778999999999
Q ss_pred ccccHHHHHHHHcC--CCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHH
Q 039408 238 QELEPYAIESISVN--GMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIG 315 (456)
Q Consensus 238 ~~le~~~~~~~~~~--~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~a 315 (456)
++||+++++++++. ..|++|+|||++..............+.+|.+|||+++++|||||||||+..++.+++++++.+
T Consensus 225 ~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~ 304 (475)
T PLN02167 225 TELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQA 304 (475)
T ss_pred HHHHHHHHHHHHhhcccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHH
Confidence 99999999998652 2368999999986432110000012236799999999889999999999999999999999999
Q ss_pred HHhcCCeEEEEEeCCCCC----ccCCCCcc-cc----ccccccCchh----------HHhhcCCcee--EEeeCcceecc
Q 039408 316 LQRVGFRFLWSIREPSKS----KIYLPGEY-TN----LKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIATW 374 (456)
Q Consensus 316 l~~~~~~~vw~~~~~~~~----~~~~~~~~-~n----~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~~ 374 (456)
|+.++++|||+++..... ...+|.+- +| .++..|+||. |++|+|.+++ |+++|||||+|
T Consensus 305 l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~ 384 (475)
T PLN02167 305 LELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATW 384 (475)
T ss_pred HHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEec
Confidence 999999999999854110 01122110 12 2567899985 7778777777 99999999999
Q ss_pred ccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHHhhccCCCchhcc
Q 039408 375 PLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRTAVMEEGSSNKSL 454 (456)
Q Consensus 375 P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a~~~gGss~~~~ 454 (456)
|+++||+.||+++++.||+|+.+...+..+. .+.+++++|+++|+++|.++++||+||+++++.+++|+++||||++||
T Consensus 385 P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~-~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l 463 (475)
T PLN02167 385 PMYAEQQLNAFTMVKELGLAVELRLDYVSAY-GEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAV 463 (475)
T ss_pred cccccchhhHHHHHHHhCeeEEeeccccccc-CCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHH
Confidence 9999999999987666799999974210000 035799999999999997345999999999999999999999999998
Q ss_pred CC
Q 039408 455 GS 456 (456)
Q Consensus 455 ~~ 456 (456)
++
T Consensus 464 ~~ 465 (475)
T PLN02167 464 KR 465 (475)
T ss_pred HH
Confidence 63
No 6
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1.8e-62 Score=489.24 Aligned_cols=417 Identities=29% Similarity=0.476 Sum_probs=302.3
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcC-CCceEEEEEEcCCCCChhhHHhhhh-hhccccCCCCCceEEEeCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNR-DRRFCATVLIMTVPERPIVNAYVKS-RDALATTTDAHNINFVYLPSVDP 78 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~r-GH~~~Vt~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~l~~~~~ 78 (456)
|.++||+++|+|++||++||++||+.|+++ | ++|||+++..+.... .... +. ......+|+|+.+|+...
T Consensus 1 ~~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g--~~vT~v~t~~~~~~~---~~~~~~~---~~~~~~~i~~~~lp~~~~ 72 (470)
T PLN03015 1 MDQPHALLVASPGLGHLIPILELGNRLSSVLN--IHVTILAVTSGSSSP---TETEAIH---AAAARTTCQITEIPSVDV 72 (470)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHhCCC--CeEEEEECCCchhhh---ccccccc---cccCCCceEEEECCCCcc
Confidence 778899999999999999999999999976 7 669999876432110 0011 11 000112599999986542
Q ss_pred CCCC-CCC-ChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCC-eEEEecccHHH
Q 039408 79 PSPD-QYK-STLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIP-CYLYFASPASF 155 (456)
Q Consensus 79 ~~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP-~v~~~~~~~~~ 155 (456)
++. ..+ +....+..++. .+...++++++. ...+++|||+|.++.|+.++|+++||| +++|++++++.
T Consensus 73 -~~l~~~~~~~~~~~~~~~~----~~~~~~~~~l~~-----l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~ 142 (470)
T PLN03015 73 -DNLVEPDATIFTKMVVKMR----AMKPAVRDAVKS-----MKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWF 142 (470)
T ss_pred -ccCCCCCccHHHHHHHHHH----hchHHHHHHHHh-----cCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHH
Confidence 221 111 12111222222 344445555543 113689999999999999999999999 58888888888
Q ss_pred HHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEec
Q 039408 156 LGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVN 235 (456)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (456)
++++++++.+..... ... ......+.+||+| +++..++|..+.......+..+.+......+++++++|
T Consensus 143 ~~~~~~l~~~~~~~~-------~~~---~~~~~~~~vPg~p-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvN 211 (470)
T PLN03015 143 LAVMVYLPVLDTVVE-------GEY---VDIKEPLKIPGCK-PVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVN 211 (470)
T ss_pred HHHHHhhhhhhcccc-------ccc---CCCCCeeeCCCCC-CCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEe
Confidence 777777654321100 000 0101235689986 68888888765432112234444555567789999999
Q ss_pred ccccccHHHHHHHHcCC------CCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHH
Q 039408 236 TFQELEPYAIESISVNG------MPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQL 309 (456)
Q Consensus 236 s~~~le~~~~~~~~~~~------~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~ 309 (456)
||++||+++++++++.. .+++|+|||++..... ...+.+|.+|||+++++|||||||||+..++.+|+
T Consensus 212 Tf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~~------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~ 285 (470)
T PLN03015 212 TWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNVH------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQT 285 (470)
T ss_pred chHHHhHHHHHHHHhhcccccccCCceEEecCCCCCccc------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHH
Confidence 99999999999997631 2569999999843211 12345799999999899999999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCC--C----c-cCCC-Ccccc---------ccccccCchh----------HHhhcCCce
Q 039408 310 REIAIGLQRVGFRFLWSIREPSK--S----K-IYLP-GEYTN---------LKVKEMLPEG----------FLNRTAGVG 362 (456)
Q Consensus 310 ~~l~~al~~~~~~~vw~~~~~~~--~----~-~~~~-~~~~n---------~~~~~~lP~~----------f~~~~g~~G 362 (456)
++++.+|+.++++|||+++.+.. + . .... ..|+| +.+..|+||. |++|+|.++
T Consensus 286 ~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS 365 (470)
T PLN03015 286 VELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSS 365 (470)
T ss_pred HHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchh
Confidence 99999999999999999985310 0 0 0011 13344 4567899974 888888777
Q ss_pred e--EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCC----ChHHHHHHHHH
Q 039408 363 L--SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDG----DDEVRKKVKEM 436 (456)
Q Consensus 363 ~--al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~----~~~~r~~A~~l 436 (456)
+ |+++|||||+||+++||+.||+++++.||+|+++.... . .+.+++++|+++|+++|.+ .+++|+||+++
T Consensus 366 ~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~-~---~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~l 441 (470)
T PLN03015 366 VLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELP-S---EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEV 441 (470)
T ss_pred HHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccc-c---CCccCHHHHHHHHHHHHccCcccHHHHHHHHHHH
Confidence 7 99999999999999999999999988899999996211 0 1479999999999999941 25999999999
Q ss_pred HHHHHHhhccCCCchhccCC
Q 039408 437 REKSRTAVMEEGSSNKSLGS 456 (456)
Q Consensus 437 ~~~~~~a~~~gGss~~~~~~ 456 (456)
++.+++|+++||||++||++
T Consensus 442 k~~a~~Av~eGGSS~~nl~~ 461 (470)
T PLN03015 442 RVSSERAWSHGGSSYNSLFE 461 (470)
T ss_pred HHHHHHHhcCCCcHHHHHHH
Confidence 99999999999999999863
No 7
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2.2e-62 Score=495.80 Aligned_cols=425 Identities=39% Similarity=0.676 Sum_probs=306.9
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCC--ceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDR--RFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDP 78 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH--~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 78 (456)
|.|.||+++|+|++||++||++||+.|+.+|+ +++|||++++.+.+. +...++.... .......+|+|+.+|+...
T Consensus 1 ~~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~-~~~~~~~~~~-~~~~~~~~i~~~~lp~~~~ 78 (480)
T PLN00164 1 MAAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPE-SASEVAAHVR-REAASGLDIRFHHLPAVEP 78 (480)
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccc-hhHHHHHHHh-hcccCCCCEEEEECCCCCC
Confidence 78899999999999999999999999999962 266999998754321 0011111100 0001112599999987654
Q ss_pred CCCCCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHH
Q 039408 79 PSPDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGF 158 (456)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 158 (456)
|++.+ +....+..+.. .+...++++++. ...+++|||+|.++.|+.++|+++|||++.|++++++.+++
T Consensus 79 p~~~e--~~~~~~~~~~~----~~~~~l~~~L~~-----l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~ 147 (480)
T PLN00164 79 PTDAA--GVEEFISRYIQ----LHAPHVRAAIAG-----LSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLAL 147 (480)
T ss_pred CCccc--cHHHHHHHHHH----hhhHHHHHHHHh-----cCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHH
Confidence 43332 22222332333 344445555442 11357999999999999999999999999999999999998
Q ss_pred HhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEecccc
Q 039408 159 MLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTFQ 238 (456)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 238 (456)
+++.+........+ + ......+.+||++ .++..++|..+.......+..+........+++++++|||+
T Consensus 148 ~~~~~~~~~~~~~~-------~---~~~~~~~~iPGlp-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~ 216 (480)
T PLN00164 148 MLRLPALDEEVAVE-------F---EEMEGAVDVPGLP-PVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAA 216 (480)
T ss_pred HhhhhhhcccccCc-------c---cccCcceecCCCC-CCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechH
Confidence 88876432211100 1 1111234589986 57888888765432112234455555666789999999999
Q ss_pred cccHHHHHHHHcCC------CCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHH
Q 039408 239 ELEPYAIESISVNG------MPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREI 312 (456)
Q Consensus 239 ~le~~~~~~~~~~~------~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l 312 (456)
|||+++++++++.. .+++|+|||++...... . ....+.+|.+|||+++++|||||||||+..++.+|++++
T Consensus 217 eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~~~--~-~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~el 293 (480)
T PLN00164 217 ELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAFTP--P-AEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREI 293 (480)
T ss_pred HhhHHHHHHHHhccccccCCCCceEEeCCCccccccC--C-CccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHH
Confidence 99999999997632 26899999997432110 0 113456799999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEEEeCCCC-C-----ccCCC-Ccccc---------ccccccCchh----------HHhhcCCcee--E
Q 039408 313 AIGLQRVGFRFLWSIREPSK-S-----KIYLP-GEYTN---------LKVKEMLPEG----------FLNRTAGVGL--S 364 (456)
Q Consensus 313 ~~al~~~~~~~vw~~~~~~~-~-----~~~~~-~~~~n---------~~~~~~lP~~----------f~~~~g~~G~--a 364 (456)
+.+|+.++++|||+++.... + +.... ..|+| +.+..|.||. |++|+|.+++ |
T Consensus 294 a~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Ea 373 (480)
T PLN00164 294 AAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLES 373 (480)
T ss_pred HHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHH
Confidence 99999999999999985411 0 00000 02233 4455899985 7777777777 9
Q ss_pred EeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCC----ChHHHHHHHHHHHHH
Q 039408 365 LWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDG----DDEVRKKVKEMREKS 440 (456)
Q Consensus 365 l~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~----~~~~r~~A~~l~~~~ 440 (456)
+++|||||+||+++||+.||+++++.||+|+.+..+.+. ++.+++++|+++|+++|.+ .+++|+||+++++++
T Consensus 374 i~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~---~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~ 450 (480)
T PLN00164 374 LWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKR---DNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAAC 450 (480)
T ss_pred HHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccccc---CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999998878999999642110 1358999999999999962 246999999999999
Q ss_pred HHhhccCCCchhccC
Q 039408 441 RTAVMEEGSSNKSLG 455 (456)
Q Consensus 441 ~~a~~~gGss~~~~~ 455 (456)
++|+++||||++||+
T Consensus 451 ~~a~~~gGSS~~~l~ 465 (480)
T PLN00164 451 RKAVEEGGSSYAALQ 465 (480)
T ss_pred HHHhcCCCcHHHHHH
Confidence 999999999999986
No 8
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.5e-62 Score=491.95 Aligned_cols=420 Identities=25% Similarity=0.383 Sum_probs=303.0
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCC---CC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSV---DP 78 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~---~~ 78 (456)
+++||+++|+|++||++||++||+.|+.+| ++|||++++.+. +.+.... ...++++++.++.+ ..
T Consensus 8 ~~~HVvl~PfpaqGHi~P~l~LAk~La~~G--~~VTfv~T~~n~-----~~~~~~~-----~~~~~i~~~~lp~P~~~~l 75 (477)
T PLN02863 8 AGTHVLVFPFPAQGHMIPLLDLTHRLALRG--LTITVLVTPKNL-----PFLNPLL-----SKHPSIETLVLPFPSHPSI 75 (477)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHHHhCC--CEEEEEeCCCcH-----HHHhhhc-----ccCCCeeEEeCCCCCcCCC
Confidence 467999999999999999999999999999 559999987432 2222221 11236888776532 13
Q ss_pred CCCCCC-CC-hHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHH
Q 039408 79 PSPDQY-KS-TLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFL 156 (456)
Q Consensus 79 ~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 156 (456)
|++.+. .+ ..+.+..+.... ..+...+.+++++ ...+++|||+|.++.|+.++|+++|||++.|++++++.+
T Consensus 76 PdG~~~~~~~~~~~~~~~~~a~-~~~~~~~~~~l~~-----~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~ 149 (477)
T PLN02863 76 PSGVENVKDLPPSGFPLMIHAL-GELYAPLLSWFRS-----HPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMAL 149 (477)
T ss_pred CCCCcChhhcchhhHHHHHHHH-HHhHHHHHHHHHh-----CCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHH
Confidence 455443 11 112222233322 3444555555543 124679999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccccccCCccccCCCCCCce---ecCCCCCCCCCCCCChhhhcc--ccccHHHHHHHHHhhccCCe
Q 039408 157 GFMLHFPNIDAQIANEFVESNTDFFVPKDSTTEL---VIPSFANPLPPSVLPSTVLKR--KRDGYVWYLRHAARYMETEG 231 (456)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 231 (456)
+++++++... ....+ . .+....+ .+||++ .++.+++|.++... .......+.+.+.....+++
T Consensus 150 ~~~~~~~~~~-~~~~~-------~---~~~~~~~~~~~iPg~~-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (477)
T PLN02863 150 SIMYSLWREM-PTKIN-------P---DDQNEILSFSKIPNCP-KYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWG 217 (477)
T ss_pred HHHHHHhhcc-ccccc-------c---cccccccccCCCCCCC-CcChHhCchhhhccCccchHHHHHHHHHhhhccCCE
Confidence 8887764211 00000 0 0101111 367775 67888888766421 01112333344444557789
Q ss_pred EEecccccccHHHHHHHHcCCC-CCeEEecccccCCCCCC----CCC-CCCChhhHHhhhccCCCCeEEEEeccCCcCCC
Q 039408 232 IVVNTFQELEPYAIESISVNGM-PPVYPIGPVLDLNGPAQ----WHP-DRVHHESIMKWLDDQPPSSVVFLCFGSMGSFV 305 (456)
Q Consensus 232 ~l~~s~~~le~~~~~~~~~~~~-~~v~~vGpl~~~~~~~~----~~~-~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~ 305 (456)
+++|||++||+++++++++.+. +++++|||++....... ... ....+++|.+|||+++++|||||||||+..++
T Consensus 218 vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~ 297 (477)
T PLN02863 218 LVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLT 297 (477)
T ss_pred EEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCC
Confidence 9999999999999999976443 68999999975331110 000 00134679999999988999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEeCCCCC---ccCCCCc------cccccccccCchh----------HHhhcCCcee--E
Q 039408 306 GPQLREIAIGLQRVGFRFLWSIREPSKS---KIYLPGE------YTNLKVKEMLPEG----------FLNRTAGVGL--S 364 (456)
Q Consensus 306 ~~~~~~l~~al~~~~~~~vw~~~~~~~~---~~~~~~~------~~n~~~~~~lP~~----------f~~~~g~~G~--a 364 (456)
.+++++++.+|+.++++|||+++..... ...+|.+ ..++++..|+||. |++|+|.+++ |
T Consensus 298 ~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea 377 (477)
T PLN02863 298 KEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEG 377 (477)
T ss_pred HHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHH
Confidence 9999999999999999999999854110 1123321 2356678999985 6777777777 9
Q ss_pred EeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHHhh
Q 039408 365 LWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRTAV 444 (456)
Q Consensus 365 l~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a~ 444 (456)
+++|||||+||+++||+.||+++++.||+|+++.... .+.++.++++++|+++|.++++||+||+++++.+++|+
T Consensus 378 l~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~-----~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av 452 (477)
T PLN02863 378 LVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA-----DTVPDSDELARVFMESVSENQVERERAKELRRAALDAI 452 (477)
T ss_pred HHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC-----CCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998889999996321 13578999999999999547899999999999999999
Q ss_pred ccCCCchhccCC
Q 039408 445 MEEGSSNKSLGS 456 (456)
Q Consensus 445 ~~gGss~~~~~~ 456 (456)
++||||++||++
T Consensus 453 ~~gGSS~~~l~~ 464 (477)
T PLN02863 453 KERGSSVKDLDG 464 (477)
T ss_pred ccCCcHHHHHHH
Confidence 999999999863
No 9
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.2e-61 Score=487.44 Aligned_cols=423 Identities=24% Similarity=0.369 Sum_probs=302.8
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhh---hhccc-cCCCCCceEEEeCCCCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKS---RDALA-TTTDAHNINFVYLPSVDP 78 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~---~~~~~-~~~~~~~i~~~~l~~~~~ 78 (456)
++||+++|+|++||++||++||+.|+.+| +.|||++++.+. ..+.. +.... .......++|..++++.
T Consensus 7 ~~HVv~~PfpaqGHi~Pml~lA~~La~~G--~~vT~v~T~~~~-----~~~~~a~~~~~~~~~~~~~~~i~~~~~pdgl- 78 (480)
T PLN02555 7 LVHVMLVSFPGQGHVNPLLRLGKLLASKG--LLVTFVTTESWG-----KKMRQANKIQDGVLKPVGDGFIRFEFFEDGW- 78 (480)
T ss_pred CCEEEEECCcccccHHHHHHHHHHHHhCC--CeEEEEeccchh-----hhhhccccccccccccCCCCeEEEeeCCCCC-
Confidence 57999999999999999999999999999 669999987322 11111 10000 00001236777676543
Q ss_pred CCCCCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHH
Q 039408 79 PSPDQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLG 157 (456)
Q Consensus 79 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 157 (456)
|++.+. .+.. .++......+...++++++.... ...+++|||+|.++.|+.++|+++|||+++|++++++.++
T Consensus 79 p~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~~--~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~ 152 (480)
T PLN02555 79 AEDDPRRQDLD----LYLPQLELVGKREIPNLVKRYAE--QGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFS 152 (480)
T ss_pred CCCcccccCHH----HHHHHHHHhhhHHHHHHHHHHhc--cCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHH
Confidence 444322 1222 23332222334444444432100 1134599999999999999999999999999999999888
Q ss_pred HHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhcc--ccccHHHHHHHHHhhccCCeEEec
Q 039408 158 FMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKR--KRDGYVWYLRHAARYMETEGIVVN 235 (456)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 235 (456)
++++.+. +.++. ... ...+..+.+||+| .++.+++|.++... .......+.+.+....+++++++|
T Consensus 153 ~~~~~~~----~~~~~----~~~---~~~~~~~~iPglp-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvN 220 (480)
T PLN02555 153 AYYHYYH----GLVPF----PTE---TEPEIDVQLPCMP-LLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILID 220 (480)
T ss_pred HHHHHhh----cCCCc----ccc---cCCCceeecCCCC-CcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEE
Confidence 8777632 11110 000 1112335689986 58888888766421 111234455566667788999999
Q ss_pred ccccccHHHHHHHHcCCCCCeEEecccccCCCCC-CC-CCC-CCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHH
Q 039408 236 TFQELEPYAIESISVNGMPPVYPIGPVLDLNGPA-QW-HPD-RVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREI 312 (456)
Q Consensus 236 s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~-~~-~~~-~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l 312 (456)
||++||+++++++++ ..+ +|+|||++...... .. ... ...+.+|.+|||+++++|||||||||+..++.+++.++
T Consensus 221 Tf~eLE~~~~~~l~~-~~~-v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~el 298 (480)
T PLN02555 221 TFQELEKEIIDYMSK-LCP-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEI 298 (480)
T ss_pred chHHHhHHHHHHHhh-CCC-EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHH
Confidence 999999999999876 334 99999997532110 10 000 13356799999999888999999999999999999999
Q ss_pred HHHHHhcCCeEEEEEeCCCC----CccCCC-----CccccccccccCchh----------HHhhcCCcee--EEeeCcce
Q 039408 313 AIGLQRVGFRFLWSIREPSK----SKIYLP-----GEYTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPI 371 (456)
Q Consensus 313 ~~al~~~~~~~vw~~~~~~~----~~~~~~-----~~~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~ 371 (456)
+.+|+.++++|||+++.... ....+| +..+|+++.+|+||. |++|+|.+++ |+++||||
T Consensus 299 a~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~ 378 (480)
T PLN02555 299 AYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPV 378 (480)
T ss_pred HHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCE
Confidence 99999999999999984310 001123 234577788999986 7788887777 99999999
Q ss_pred eccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHhhccCCC
Q 039408 372 ATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD--DEVRKKVKEMREKSRTAVMEEGS 449 (456)
Q Consensus 372 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~r~~A~~l~~~~~~a~~~gGs 449 (456)
|+||+++||+.||+++++.||+|+++...++.+ +.+++++|+++|+++|.++ +++|+||+++++.+++|+++|||
T Consensus 379 l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~---~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGS 455 (480)
T PLN02555 379 VCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAEN---KLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGS 455 (480)
T ss_pred EeCCCccccHHHHHHHHHHhCceEEccCCcccc---CcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999996321111 4689999999999999632 58999999999999999999999
Q ss_pred chhccCC
Q 039408 450 SNKSLGS 456 (456)
Q Consensus 450 s~~~~~~ 456 (456)
|++||++
T Consensus 456 S~~~l~~ 462 (480)
T PLN02555 456 SDRNFQE 462 (480)
T ss_pred HHHHHHH
Confidence 9999863
No 10
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=9e-62 Score=486.98 Aligned_cols=408 Identities=28% Similarity=0.490 Sum_probs=298.5
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHH-cCCCceEEEEEEcCCCCChhhHHhh-hhhhccccCCCCCceEEEeCCCCCCC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLT-NRDRRFCATVLIMTVPERPIVNAYV-KSRDALATTTDAHNINFVYLPSVDPP 79 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~-~rGH~~~Vt~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~l~~~~~~ 79 (456)
.++||+++|+|++||++||++||+.|+ ++| ++|||++++.+. +.+ +... ..++|+++.+|....+
T Consensus 4 ~~pHVvl~P~paqGHi~P~l~LAk~La~~~g--~~vT~v~t~~n~-----~~~~~~~~------~~~~i~~~~lp~p~~~ 70 (481)
T PLN02992 4 TKPHAAMFSSPGMGHVIPVIELGKRLSANHG--FHVTVFVLETDA-----ASAQSKFL------NSTGVDIVGLPSPDIS 70 (481)
T ss_pred CCcEEEEeCCcccchHHHHHHHHHHHHhCCC--cEEEEEeCCCch-----hhhhhccc------cCCCceEEECCCcccc
Confidence 367999999999999999999999998 788 559999987432 111 1111 1236899988853311
Q ss_pred CCCC-C-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHH
Q 039408 80 SPDQ-Y-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLG 157 (456)
Q Consensus 80 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 157 (456)
+.. . .+....+..+.. .+...++++++. ...+|+|||+|.++.|+.++|+++|||+++|++++++.++
T Consensus 71 -glp~~~~~~~~~~~~~~~----~~~~~~~~~l~~-----~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~ 140 (481)
T PLN02992 71 -GLVDPSAHVVTKIGVIMR----EAVPTLRSKIAE-----MHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLG 140 (481)
T ss_pred -CCCCCCccHHHHHHHHHH----HhHHHHHHHHHh-----cCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHH
Confidence 110 0 111111222222 333444444442 1236899999999999999999999999999999998888
Q ss_pred HHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEeccc
Q 039408 158 FMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTF 237 (456)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~ 237 (456)
++.+.+.+......+ . ......+.+||++ +++..++|..+.......+..+.+......+++++++|||
T Consensus 141 ~~~~~~~~~~~~~~~-------~---~~~~~~~~iPg~~-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf 209 (481)
T PLN02992 141 VSIYYPTLDKDIKEE-------H---TVQRKPLAMPGCE-PVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTW 209 (481)
T ss_pred HHHhhhhhccccccc-------c---ccCCCCcccCCCC-ccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEech
Confidence 777665432111100 0 0011234678885 5777788864433211224555666666778999999999
Q ss_pred ccccHHHHHHHHcC------CCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHH
Q 039408 238 QELEPYAIESISVN------GMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLRE 311 (456)
Q Consensus 238 ~~le~~~~~~~~~~------~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~ 311 (456)
++||+++++++++. ..+++|+|||++..... . ..+.+|.+|||+++++|||||||||+..++.+|+++
T Consensus 210 ~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~~---~---~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~e 283 (481)
T PLN02992 210 EEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQS---S---KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTE 283 (481)
T ss_pred HHHhHHHHHHHhhccccccccCCceEEecCccCCcCC---C---cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHH
Confidence 99999999998642 12579999999754211 0 234579999999988999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEEeCCCCCc--------------cCCC-Cccc---------cccccccCchh----------HHhh
Q 039408 312 IAIGLQRVGFRFLWSIREPSKSK--------------IYLP-GEYT---------NLKVKEMLPEG----------FLNR 357 (456)
Q Consensus 312 l~~al~~~~~~~vw~~~~~~~~~--------------~~~~-~~~~---------n~~~~~~lP~~----------f~~~ 357 (456)
++.+|+.++++|||+++.+..+. ..++ ..|+ ++.+.+|+||. |++|
T Consensus 284 la~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH 363 (481)
T PLN02992 284 LAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTH 363 (481)
T ss_pred HHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEec
Confidence 99999999999999998531100 0001 1233 36778999985 8888
Q ss_pred cCCcee--EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC--hHHHHHH
Q 039408 358 TAGVGL--SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD--DEVRKKV 433 (456)
Q Consensus 358 ~g~~G~--al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~r~~A 433 (456)
+|.+++ |+++|||||+||+++||+.||+++++.||+|+.++.. ++.++.++|+++|+++|.++ ++||+||
T Consensus 364 ~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~------~~~~~~~~l~~av~~vm~~~~g~~~r~~a 437 (481)
T PLN02992 364 CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP------KEVISRSKIEALVRKVMVEEEGEEMRRKV 437 (481)
T ss_pred CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC------CCcccHHHHHHHHHHHhcCCchHHHHHHH
Confidence 888787 9999999999999999999999997557999999842 13689999999999999722 4999999
Q ss_pred HHHHHHHHHhhc--cCCCchhccC
Q 039408 434 KEMREKSRTAVM--EEGSSNKSLG 455 (456)
Q Consensus 434 ~~l~~~~~~a~~--~gGss~~~~~ 455 (456)
+++++.+++|+. +||||++||+
T Consensus 438 ~~~~~~a~~Av~~~~GGSS~~~l~ 461 (481)
T PLN02992 438 KKLRDTAEMSLSIDGGGVAHESLC 461 (481)
T ss_pred HHHHHHHHHHhcCCCCCchHHHHH
Confidence 999999999994 5999999986
No 11
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.8e-61 Score=482.24 Aligned_cols=403 Identities=22% Similarity=0.337 Sum_probs=298.3
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCC-C
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPS-P 81 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~ 81 (456)
+.||+++|+|++||++||++||+.|+.+| ++|||++++.+. +++.+ ...++|+|+.++++. |+ +
T Consensus 5 ~~hvv~~P~paqGHi~P~l~lAk~La~~G--~~vT~v~t~~~~--------~~~~~----~~~~~i~~~~ipdgl-p~~~ 69 (449)
T PLN02173 5 RGHVLAVPFPSQGHITPIRQFCKRLHSKG--FKTTHTLTTFIF--------NTIHL----DPSSPISIATISDGY-DQGG 69 (449)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHHcCC--CEEEEEECCchh--------hhccc----CCCCCEEEEEcCCCC-CCcc
Confidence 45999999999999999999999999999 459999987321 12210 112469999998754 44 2
Q ss_pred CCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHHh
Q 039408 82 DQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFML 160 (456)
Q Consensus 82 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 160 (456)
.+. .+...++..+...+.+.+++.++.+.. ...+++|||+|.++.|+.++|+++|||++.|++++++.+..++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~ 143 (449)
T PLN02173 70 FSSAGSVPEYLQNFKTFGSKTVADIIRKHQS------TDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINY 143 (449)
T ss_pred cccccCHHHHHHHHHHhhhHHHHHHHHHhhc------cCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHH
Confidence 222 223333333333344445555444321 1123499999999999999999999999999999888776654
Q ss_pred hcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhcccc--ccHHHHHHHHHhhccCCeEEecccc
Q 039408 161 HFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKR--DGYVWYLRHAARYMETEGIVVNTFQ 238 (456)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~s~~ 238 (456)
+. .+. . ....+.+|++| .++..++|.++..... .....+.+.+....+++++++|||+
T Consensus 144 ~~-~~~-~-----------------~~~~~~~pg~p-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~ 203 (449)
T PLN02173 144 LS-YIN-N-----------------GSLTLPIKDLP-LLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFH 203 (449)
T ss_pred hH-Hhc-c-----------------CCccCCCCCCC-CCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHH
Confidence 32 110 0 01123468886 5777888876643111 1234455566677789999999999
Q ss_pred cccHHHHHHHHcCCCCCeEEecccccCC---C---CCCC-C-CCC--CChhhHHhhhccCCCCeEEEEeccCCcCCCHHH
Q 039408 239 ELEPYAIESISVNGMPPVYPIGPVLDLN---G---PAQW-H-PDR--VHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQ 308 (456)
Q Consensus 239 ~le~~~~~~~~~~~~~~v~~vGpl~~~~---~---~~~~-~-~~~--~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~ 308 (456)
+||++++++++. . +++|+|||++... . .... . ..+ ..+++|.+|||+++++|||||||||+..++.++
T Consensus 204 eLE~~~~~~~~~-~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~ 281 (449)
T PLN02173 204 DLDLHENELLSK-V-CPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQ 281 (449)
T ss_pred HhhHHHHHHHHh-c-CCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHH
Confidence 999999999875 3 4799999997421 0 0000 0 000 123469999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEeCCCCCccCCCCc------cccccccccCchh----------HHhhcCCcee--EEeeCcc
Q 039408 309 LREIAIGLQRVGFRFLWSIREPSKSKIYLPGE------YTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVP 370 (456)
Q Consensus 309 ~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~------~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP 370 (456)
+++++.+| ++.+|+|+++..... .+|++ ++|+++.+|+||. |++|+|.+++ |+++|||
T Consensus 282 ~~ela~gL--s~~~flWvvr~~~~~--~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP 357 (449)
T PLN02173 282 MEEIASAI--SNFSYLWVVRASEES--KLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVP 357 (449)
T ss_pred HHHHHHHh--cCCCEEEEEeccchh--cccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCC
Confidence 99999999 688999999853111 12321 4678888999985 8888888888 9999999
Q ss_pred eeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHhhccCC
Q 039408 371 IATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD--DEVRKKVKEMREKSRTAVMEEG 448 (456)
Q Consensus 371 ~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~r~~A~~l~~~~~~a~~~gG 448 (456)
||+||+++||+.||+++++.||+|+.+..++. ++.+++|+|+++|+++|.++ +++|+||+++++++++|+++||
T Consensus 358 ~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~----~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gG 433 (449)
T PLN02173 358 MVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKE----SGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGG 433 (449)
T ss_pred EEecCchhcchHHHHHHHHHhCceEEEeeccc----CCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999975321 13579999999999999732 5899999999999999999999
Q ss_pred CchhccCC
Q 039408 449 SSNKSLGS 456 (456)
Q Consensus 449 ss~~~~~~ 456 (456)
||++|+++
T Consensus 434 SS~~~l~~ 441 (449)
T PLN02173 434 STDININT 441 (449)
T ss_pred cHHHHHHH
Confidence 99999863
No 12
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=1.7e-61 Score=483.13 Aligned_cols=408 Identities=22% Similarity=0.280 Sum_probs=302.0
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHc-CCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTN-RDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPP 79 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~-rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 79 (456)
|.+.||+++|+|++||++||++||+.|++ +| +.|||++++.+ ..+...+. ....++++|+.++++. |
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~La~~La~~~G--~~vT~v~t~~~-------~~~~~~~~--~~~~~~i~~~~i~dgl-p 68 (455)
T PLN02152 1 MAPPHFLLVTFPAQGHVNPSLRFARRLIKTTG--TRVTFATCLSV-------IHRSMIPN--HNNVENLSFLTFSDGF-D 68 (455)
T ss_pred CCCcEEEEecCcccccHHHHHHHHHHHhhCCC--cEEEEEeccch-------hhhhhhcc--CCCCCCEEEEEcCCCC-C
Confidence 77889999999999999999999999996 68 55999998622 01111100 0112369999998654 4
Q ss_pred CCCCC--CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHH
Q 039408 80 SPDQY--KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLG 157 (456)
Q Consensus 80 ~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 157 (456)
.+.+. .+....+..+...+.+.+.+.++++.. ...+++|||+|.++.|+.++|+++|||++.|++++++.++
T Consensus 69 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~------~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~ 142 (455)
T PLN02152 69 DGVISNTDDVQNRLVNFERNGDKALSDFIEANLN------GDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFD 142 (455)
T ss_pred CccccccccHHHHHHHHHHhccHHHHHHHHHhhc------cCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHH
Confidence 44321 223233333344444555555555432 1135699999999999999999999999999999999888
Q ss_pred HHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccc-cc-cHHHHHHHHHhhc--cCCeEE
Q 039408 158 FMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRK-RD-GYVWYLRHAARYM--ETEGIV 233 (456)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~~--~~~~~l 233 (456)
.+++.+.. . ...+.+||+| .++.+++|.++.... .. ....+.+...... .+++++
T Consensus 143 ~~~~~~~~------------------~--~~~~~iPglp-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl 201 (455)
T PLN02152 143 IYYNYSTG------------------N--NSVFEFPNLP-SLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKIL 201 (455)
T ss_pred HHHHhhcc------------------C--CCeeecCCCC-CCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEE
Confidence 87665310 0 1234578886 577888888664311 11 1344444555443 257999
Q ss_pred ecccccccHHHHHHHHcCCCCCeEEecccccCCC--CCCCCC--C-CCChhhHHhhhccCCCCeEEEEeccCCcCCCHHH
Q 039408 234 VNTFQELEPYAIESISVNGMPPVYPIGPVLDLNG--PAQWHP--D-RVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQ 308 (456)
Q Consensus 234 ~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~--~~~~~~--~-~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~ 308 (456)
+|||++||++++++++. .++|+|||++.... ...... . ...+.+|.+|||+++++|||||||||+..++.++
T Consensus 202 vNTf~eLE~~~~~~l~~---~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q 278 (455)
T PLN02152 202 VNTFDSLEPEFLTAIPN---IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQ 278 (455)
T ss_pred EeChHHhhHHHHHhhhc---CCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHH
Confidence 99999999999999865 36999999975321 000000 0 1234579999999988999999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEeCCCC-------C---ccCCCC-----ccccccccccCchh----------HHhhcCCcee
Q 039408 309 LREIAIGLQRVGFRFLWSIREPSK-------S---KIYLPG-----EYTNLKVKEMLPEG----------FLNRTAGVGL 363 (456)
Q Consensus 309 ~~~l~~al~~~~~~~vw~~~~~~~-------~---~~~~~~-----~~~n~~~~~~lP~~----------f~~~~g~~G~ 363 (456)
+++++.+|+.++++|||+++++.. . ...++. ..+|.++.+|+||. |++|+|.+++
T Consensus 279 ~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~ 358 (455)
T PLN02152 279 IEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSS 358 (455)
T ss_pred HHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccH
Confidence 999999999999999999986310 0 001121 24666778999985 8888888888
Q ss_pred --EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC--hHHHHHHHHHHHH
Q 039408 364 --SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD--DEVRKKVKEMREK 439 (456)
Q Consensus 364 --al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~r~~A~~l~~~ 439 (456)
|+++|||||+||+++||+.||+++++.||+|+.+..+. .+.+++++|+++|+++|+ + .+||+||+++++.
T Consensus 359 ~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~-----~~~~~~e~l~~av~~vm~-~~~~~~r~~a~~~~~~ 432 (455)
T PLN02152 359 LESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENS-----EGLVERGEIRRCLEAVME-EKSVELRESAEKWKRL 432 (455)
T ss_pred HHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCc-----CCcCcHHHHHHHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999889999886421 135799999999999996 4 3699999999999
Q ss_pred HHHhhccCCCchhccCC
Q 039408 440 SRTAVMEEGSSNKSLGS 456 (456)
Q Consensus 440 ~~~a~~~gGss~~~~~~ 456 (456)
+++|+++||||++||++
T Consensus 433 ~~~a~~~ggsS~~nl~~ 449 (455)
T PLN02152 433 AIEAGGEGGSSDKNVEA 449 (455)
T ss_pred HHHHHcCCCcHHHHHHH
Confidence 99999999999999863
No 13
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=6.9e-61 Score=481.47 Aligned_cols=411 Identities=18% Similarity=0.310 Sum_probs=298.3
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPD 82 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~ 82 (456)
++||+++|+|++||++||++||+.|+.+|+. |||+|++.+. +.+.... ...++|+|+.++++. +.+.
T Consensus 6 ~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~--VT~vtt~~~~-----~~~~~~~-----~~~~~i~~v~lp~g~-~~~~ 72 (448)
T PLN02562 6 RPKIILVPYPAQGHVTPMLKLASAFLSRGFE--PVVITPEFIH-----RRISATL-----DPKLGITFMSISDGQ-DDDP 72 (448)
T ss_pred CcEEEEEcCccccCHHHHHHHHHHHHhCCCE--EEEEeCcchh-----hhhhhcc-----CCCCCEEEEECCCCC-CCCc
Confidence 5699999999999999999999999999965 9999987321 1121110 112369999998654 2221
Q ss_pred CCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHHhhc
Q 039408 83 QYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFMLHF 162 (456)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 162 (456)
. .+.. .++......+...++++++... ...+++|||+|.++.|+.++|+++|||+++|++++++.++.+++.
T Consensus 73 ~-~~~~----~l~~a~~~~~~~~l~~ll~~l~---~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~ 144 (448)
T PLN02562 73 P-RDFF----SIENSMENTMPPQLERLLHKLD---EDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAI 144 (448)
T ss_pred c-ccHH----HHHHHHHHhchHHHHHHHHHhc---CCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHH
Confidence 1 1121 1222222233344444443210 113468999999999999999999999999999999888877766
Q ss_pred ccccccccccccccCCccccCCCCCCce-ecCCCCCCCCCCCCChhhhccc--cccHHHHHHHHHhhccCCeEEeccccc
Q 039408 163 PNIDAQIANEFVESNTDFFVPKDSTTEL-VIPSFANPLPPSVLPSTVLKRK--RDGYVWYLRHAARYMETEGIVVNTFQE 239 (456)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~s~~~ 239 (456)
+.+...+..+. ... ......+ .+|++| .++.++++.++.... ...+..+.+......+++++++|||++
T Consensus 145 ~~~~~~~~~~~----~~~---~~~~~~~~~~Pg~~-~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~e 216 (448)
T PLN02562 145 PELVRTGLISE----TGC---PRQLEKICVLPEQP-LLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKD 216 (448)
T ss_pred HHHhhcccccc----ccc---cccccccccCCCCC-CCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhh
Confidence 54332221110 000 0001112 478875 577788887654321 112455566666677889999999999
Q ss_pred ccHHHHHHHHc----CCCCCeEEecccccCCCCCCCCCC-CCChhhHHhhhccCCCCeEEEEeccCCc-CCCHHHHHHHH
Q 039408 240 LEPYAIESISV----NGMPPVYPIGPVLDLNGPAQWHPD-RVHHESIMKWLDDQPPSSVVFLCFGSMG-SFVGPQLREIA 313 (456)
Q Consensus 240 le~~~~~~~~~----~~~~~v~~vGpl~~~~~~~~~~~~-~~~~~~~~~wLd~~~~~~vVyvsfGS~~-~~~~~~~~~l~ 313 (456)
||++.++.++. ...+++++|||++........+.. ...+.+|.+|||+++++|||||||||+. .++.+++++++
T Consensus 217 LE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~ 296 (448)
T PLN02562 217 EEYDDVKNHQASYNNGQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLA 296 (448)
T ss_pred hCHHHHHHHHhhhccccCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHH
Confidence 99998887753 235789999999864321000000 1234578999999988999999999986 67999999999
Q ss_pred HHHHhcCCeEEEEEeCCCCCccCCCC-----ccccccccccCchh----------HHhhcCCcee--EEeeCcceecccc
Q 039408 314 IGLQRVGFRFLWSIREPSKSKIYLPG-----EYTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIATWPL 376 (456)
Q Consensus 314 ~al~~~~~~~vw~~~~~~~~~~~~~~-----~~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~~P~ 376 (456)
.+|+.+|++|||+++....+ .++. .++|+++.+|+||. |++|+|.+++ |+++|||||+||+
T Consensus 297 ~~l~~~g~~fiW~~~~~~~~--~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~ 374 (448)
T PLN02562 297 LALEASGRPFIWVLNPVWRE--GLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPV 374 (448)
T ss_pred HHHHHCCCCEEEEEcCCchh--hCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCc
Confidence 99999999999999764111 1332 35788888999985 7777777777 9999999999999
Q ss_pred ccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHHhhccCCCchhccCC
Q 039408 377 YAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRTAVMEEGSSNKSLGS 456 (456)
Q Consensus 377 ~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a~~~gGss~~~~~~ 456 (456)
++||+.||+++++.||+|+.+. .+++++|+++|+++|. +++||+||++++++++++ +.||||++||++
T Consensus 375 ~~DQ~~na~~~~~~~g~g~~~~----------~~~~~~l~~~v~~~l~-~~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~ 442 (448)
T PLN02562 375 AGDQFVNCAYIVDVWKIGVRIS----------GFGQKEVEEGLRKVME-DSGMGERLMKLRERAMGE-EARLRSMMNFTT 442 (448)
T ss_pred ccchHHHHHHHHHHhCceeEeC----------CCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhc-CCCCCHHHHHHH
Confidence 9999999999998789999886 3799999999999998 899999999999999987 778999999863
No 14
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=7.2e-61 Score=482.30 Aligned_cols=426 Identities=23% Similarity=0.352 Sum_probs=301.0
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCC----CC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSV----DP 78 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~----~~ 78 (456)
+.||+++|+|++||++||++||+.|+.+|+ +|||++++.+. ......... .......|+|+.++.+ .+
T Consensus 8 ~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~--~vT~v~t~~n~-----~~~~~~~~~-~~~~~~~i~~~~lp~p~~~dgl 79 (491)
T PLN02534 8 QLHFVLIPLMAQGHMIPMIDMARLLAERGV--IVSLVTTPQNA-----SRFAKTIDR-ARESGLPIRLVQIPFPCKEVGL 79 (491)
T ss_pred CCEEEEECCCCcchHHHHHHHHHHHHhCCC--eEEEEECCCcH-----HHHhhhhhh-ccccCCCeEEEEcCCCCccCCC
Confidence 469999999999999999999999999995 59999987432 111111100 0011124899988731 23
Q ss_pred CCCCCC-CC-h-HHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHH
Q 039408 79 PSPDQY-KS-T-LGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASF 155 (456)
Q Consensus 79 ~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 155 (456)
|++.+. .+ + ...+..+... ...++..+++++++ ...+++|||+|.++.|+.++|+++|||+++|++++++.
T Consensus 80 p~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~lL~~-----~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~ 153 (491)
T PLN02534 80 PIGCENLDTLPSRDLLRKFYDA-VDKLQQPLERFLEQ-----AKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFS 153 (491)
T ss_pred CCCccccccCCcHHHHHHHHHH-HHHhHHHHHHHHHh-----cCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHH
Confidence 554432 11 1 1233333332 23556666766653 22468999999999999999999999999999999987
Q ss_pred HHHHhhcccccccccccccccCCccccCCCCCCceecCCCCC--CCCCCCCChhhhccccccHHHHHHHHHhh-ccCCeE
Q 039408 156 LGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFAN--PLPPSVLPSTVLKRKRDGYVWYLRHAARY-METEGI 232 (456)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 232 (456)
+..+++..... ...+ . ......+.+|++|. .++..++|..+.. ...+..+...+... ..++++
T Consensus 154 ~~~~~~~~~~~--~~~~-------~---~~~~~~~~iPg~p~~~~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~a~~v 219 (491)
T PLN02534 154 LLSSHNIRLHN--AHLS-------V---SSDSEPFVVPGMPQSIEITRAQLPGAFVS--LPDLDDVRNKMREAESTAFGV 219 (491)
T ss_pred HHHHHHHHHhc--cccc-------C---CCCCceeecCCCCccccccHHHCChhhcC--cccHHHHHHHHHhhcccCCEE
Confidence 76654331111 0000 1 11123456788863 2566677765432 12233344444332 357799
Q ss_pred EecccccccHHHHHHHHcCCCCCeEEecccccCCCCC--C---CCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHH
Q 039408 233 VVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPA--Q---WHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGP 307 (456)
Q Consensus 233 l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~--~---~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~ 307 (456)
++|||++||+.+++++++...+++|+|||++...... . .......+.+|.+|||+++++|||||||||+..+.++
T Consensus 220 lvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~ 299 (491)
T PLN02534 220 VVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPS 299 (491)
T ss_pred EEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHH
Confidence 9999999999999999875557899999997532110 0 0000012356999999998899999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEEEeCCCC-C---ccCCCC------ccccccccccCchh----------HHhhcCCcee--EE
Q 039408 308 QLREIAIGLQRVGFRFLWSIREPSK-S---KIYLPG------EYTNLKVKEMLPEG----------FLNRTAGVGL--SL 365 (456)
Q Consensus 308 ~~~~l~~al~~~~~~~vw~~~~~~~-~---~~~~~~------~~~n~~~~~~lP~~----------f~~~~g~~G~--al 365 (456)
++.+++.+|+.++++|||+++.+.. . ...+|. ...++++.+|+||. |++|+|.+++ |+
T Consensus 300 q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~ 379 (491)
T PLN02534 300 QLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGI 379 (491)
T ss_pred HHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHH
Confidence 9999999999999999999995310 0 001111 23466678999985 7778777777 99
Q ss_pred eeCcceeccccccccchhHHHHHHhhcceEEecccc----cCCCCCc-ccchHHHHHHHHHhcC--C--ChHHHHHHHHH
Q 039408 366 WYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDY----RDGRGSD-LVSAEEIEWGLRRLMD--G--DDEVRKKVKEM 436 (456)
Q Consensus 366 ~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~----~~~~~~~-~~~~~~l~~ai~~vl~--~--~~~~r~~A~~l 436 (456)
++|||||+||+++||+.||+++++.||+|+++.... ..+.+.+ .+++++|+++|+++|. + .+++|+||+++
T Consensus 380 ~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~el 459 (491)
T PLN02534 380 CSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQEL 459 (491)
T ss_pred HcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 999999999999999999999999999999985211 0000001 4899999999999995 2 25999999999
Q ss_pred HHHHHHhhccCCCchhccCC
Q 039408 437 REKSRTAVMEEGSSNKSLGS 456 (456)
Q Consensus 437 ~~~~~~a~~~gGss~~~~~~ 456 (456)
++.+++|+.+||||++||++
T Consensus 460 k~~a~~Av~~GGSS~~nl~~ 479 (491)
T PLN02534 460 GVMARKAMELGGSSHINLSI 479 (491)
T ss_pred HHHHHHHhcCCCcHHHHHHH
Confidence 99999999999999999863
No 15
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=5.1e-60 Score=475.64 Aligned_cols=411 Identities=23% Similarity=0.372 Sum_probs=297.3
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHH--HHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHL--LTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPS 80 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~--L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~ 80 (456)
+.||+++|+|++||++||++||++ |++||+. |||++++.+ ...++... .....+++..++++. |+
T Consensus 8 ~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~--VT~v~t~~~-----~~~~~~~~-----~~~~~~~~~~~~~gl-p~ 74 (456)
T PLN02210 8 ETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLH--FTLATTEQA-----RDLLSTVE-----KPRRPVDLVFFSDGL-PK 74 (456)
T ss_pred CCEEEEeCCcccccHHHHHHHHHHHHhhcCCcE--EEEEeccch-----hhhhcccc-----CCCCceEEEECCCCC-CC
Confidence 569999999999999999999999 5699965 999998732 11222211 112357777776543 44
Q ss_pred CCCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHHh
Q 039408 81 PDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFML 160 (456)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 160 (456)
+.+ .+... ++....+.+...++++++. .+|||||+|.++.|+.++|+++|||++.||+++++.+..+.
T Consensus 75 ~~~-~~~~~----~~~~~~~~~~~~l~~~l~~-------~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~ 142 (456)
T PLN02210 75 DDP-RAPET----LLKSLNKVGAKNLSKIIEE-------KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYY 142 (456)
T ss_pred Ccc-cCHHH----HHHHHHHhhhHHHHHHHhc-------CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHH
Confidence 332 12222 3333333444555666653 37999999999999999999999999999999998888776
Q ss_pred hcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHH-HHHHhhccCCeEEeccccc
Q 039408 161 HFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYL-RHAARYMETEGIVVNTFQE 239 (456)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~s~~~ 239 (456)
+.+.. ....+ .. .+....+.+|+++ .++..+++..+.......+..+. +.......++++++|||++
T Consensus 143 ~~~~~--~~~~~------~~---~~~~~~~~~Pgl~-~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~e 210 (456)
T PLN02210 143 RYYMK--TNSFP------DL---EDLNQTVELPALP-LLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYE 210 (456)
T ss_pred hhhhc--cCCCC------cc---cccCCeeeCCCCC-CCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHH
Confidence 54311 11111 00 0001224578875 57778888766432111122232 3334456789999999999
Q ss_pred ccHHHHHHHHcCCCCCeEEecccccCC---CCC----CCC--CCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHH
Q 039408 240 LEPYAIESISVNGMPPVYPIGPVLDLN---GPA----QWH--PDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLR 310 (456)
Q Consensus 240 le~~~~~~~~~~~~~~v~~vGpl~~~~---~~~----~~~--~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~ 310 (456)
||+++++++++ .+++++|||++... ... ... ..+..+.+|.+|||+++++|||||||||+...+.++++
T Consensus 211 LE~~~~~~l~~--~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ 288 (456)
T PLN02210 211 LESEIIESMAD--LKPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVE 288 (456)
T ss_pred HhHHHHHHHhh--cCCEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHH
Confidence 99999999876 36899999997421 100 000 00123567999999998899999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEEeCCCC-Ccc-CCCCc--cccccccccCchh----------HHhhcCCcee--EEeeCcceecc
Q 039408 311 EIAIGLQRVGFRFLWSIREPSK-SKI-YLPGE--YTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIATW 374 (456)
Q Consensus 311 ~l~~al~~~~~~~vw~~~~~~~-~~~-~~~~~--~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~~ 374 (456)
+++.+|+.++++|||+++.... ... .+.+. +++..+.+|+||. |++|+|.+++ |+++|||||+|
T Consensus 289 e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~ 368 (456)
T PLN02210 289 TIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAY 368 (456)
T ss_pred HHHHHHHhCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEec
Confidence 9999999999999999986411 000 01111 2455567899985 7777777777 99999999999
Q ss_pred ccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHhhccCCCchh
Q 039408 375 PLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD--DEVRKKVKEMREKSRTAVMEEGSSNK 452 (456)
Q Consensus 375 P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~r~~A~~l~~~~~~a~~~gGss~~ 452 (456)
|+++||+.||+++++.||+|+++...+. ++.+++++|+++|+++|.++ ++||+||+++++.+++|+++||||++
T Consensus 369 P~~~DQ~~na~~~~~~~g~G~~l~~~~~----~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~ 444 (456)
T PLN02210 369 PSWTDQPIDARLLVDVFGIGVRMRNDAV----DGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSAR 444 (456)
T ss_pred ccccccHHHHHHHHHHhCeEEEEecccc----CCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 9999999999999986799999974211 14699999999999999722 26999999999999999999999999
Q ss_pred ccCC
Q 039408 453 SLGS 456 (456)
Q Consensus 453 ~~~~ 456 (456)
||++
T Consensus 445 ~l~~ 448 (456)
T PLN02210 445 NLDL 448 (456)
T ss_pred HHHH
Confidence 9863
No 16
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.1e-60 Score=476.72 Aligned_cols=418 Identities=25% Similarity=0.385 Sum_probs=302.7
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcC--CCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNR--DRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPP 79 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 79 (456)
.+.||+++|+|++||++||++||++|+++ ||+ |||++++.+ .+.++... ...+++|+.+++.. |
T Consensus 9 ~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~--VT~~~t~~~-----~~~i~~~~------~~~gi~fv~lp~~~-p 74 (459)
T PLN02448 9 TSCHVVAMPYPGRGHINPMMNLCKLLASRKPDIL--ITFVVTEEW-----LGLIGSDP------KPDNIRFATIPNVI-P 74 (459)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHcCCCCcE--EEEEeCCch-----HhHhhccC------CCCCEEEEECCCCC-C
Confidence 35799999999999999999999999999 966 999998722 12222211 12479999998643 3
Q ss_pred CCCCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHH
Q 039408 80 SPDQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGF 158 (456)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 158 (456)
.+.+. .+....+..+.. .+...++++++. ...++||||+|.++.|+.++|+++|||++.|+++++..++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~-----~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~ 145 (459)
T PLN02448 75 SELVRAADFPGFLEAVMT----KMEAPFEQLLDR-----LEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSV 145 (459)
T ss_pred CccccccCHHHHHHHHHH----HhHHHHHHHHHh-----cCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHH
Confidence 33221 122222222222 333444445442 11368999999999999999999999999999999988887
Q ss_pred HhhcccccccccccccccCCccccCCCCCCce-ecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEeccc
Q 039408 159 MLHFPNIDAQIANEFVESNTDFFVPKDSTTEL-VIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTF 237 (456)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~ 237 (456)
+.+.+.+...+..+. .. +...+..+ .+|+++ .++..+++..+.......+..+.+.+....+++++++|||
T Consensus 146 ~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~iPg~~-~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf 217 (459)
T PLN02448 146 FYHFDLLPQNGHFPV-----EL--SESGEERVDYIPGLS-STRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSF 217 (459)
T ss_pred HHHhhhhhhccCCCC-----cc--ccccCCccccCCCCC-CCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccH
Confidence 777654322111110 00 00001111 367775 5677778765543211224455666666667889999999
Q ss_pred ccccHHHHHHHHcCCCCCeEEecccccCCCC--CCCCCCC-CChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHH
Q 039408 238 QELEPYAIESISVNGMPPVYPIGPVLDLNGP--AQWHPDR-VHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAI 314 (456)
Q Consensus 238 ~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~--~~~~~~~-~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~ 314 (456)
++||+.+++++++...+++++|||+...... ....... ..+.++..||+.++++|||||||||+...+.+++++++.
T Consensus 218 ~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~ 297 (459)
T PLN02448 218 YELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAA 297 (459)
T ss_pred HHhhHHHHHHHHhhcCCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHH
Confidence 9999999999976555689999999753211 0000001 123479999999988999999999998889999999999
Q ss_pred HHHhcCCeEEEEEeCCCCCccCCCCc-cccccccccCchh----------HHhhcCCcee--EEeeCcceeccccccccc
Q 039408 315 GLQRVGFRFLWSIREPSKSKIYLPGE-YTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIATWPLYAEQQ 381 (456)
Q Consensus 315 al~~~~~~~vw~~~~~~~~~~~~~~~-~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~~P~~~DQ~ 381 (456)
+|+.++++|||+++....+ +... ++|+++..|+||. |++|+|.+++ |+++|||||+||+++||+
T Consensus 298 ~l~~~~~~~lw~~~~~~~~---~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~ 374 (459)
T PLN02448 298 GLRDSGVRFLWVARGEASR---LKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQP 374 (459)
T ss_pred HHHhCCCCEEEEEcCchhh---HhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccch
Confidence 9999999999998754111 1111 2577778999975 7778777777 999999999999999999
Q ss_pred hhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCC----ChHHHHHHHHHHHHHHHhhccCCCchhccCC
Q 039408 382 MNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDG----DDEVRKKVKEMREKSRTAVMEEGSSNKSLGS 456 (456)
Q Consensus 382 ~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~----~~~~r~~A~~l~~~~~~a~~~gGss~~~~~~ 456 (456)
.||+++++.||+|+.+..+... .+.+++++|+++|+++|.+ .++||+||+++++.+++|+.+||||++||++
T Consensus 375 ~na~~v~~~~g~G~~~~~~~~~---~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~ 450 (459)
T PLN02448 375 LNSKLIVEDWKIGWRVKREVGE---ETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDA 450 (459)
T ss_pred hhHHHHHHHhCceEEEeccccc---CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 9999999988999999742110 1368999999999999972 1389999999999999999999999999863
No 17
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.2e-58 Score=462.89 Aligned_cols=397 Identities=18% Similarity=0.250 Sum_probs=287.5
Q ss_pred CC-CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCC---
Q 039408 1 MK-KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSV--- 76 (456)
Q Consensus 1 m~-~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~--- 76 (456)
|+ ++||+++|+|++||++||++||+.|+++||+ |||+|++. +..++.+. .....+++|..++..
T Consensus 1 ~~~~~hvv~~P~paqGHi~P~l~LAk~La~~G~~--VT~vtt~~--------~~~~i~~~--~a~~~~i~~~~l~~p~~d 68 (442)
T PLN02208 1 MEPKFHAFMFPWFAFGHMIPFLHLANKLAEKGHR--VTFLLPKK--------AQKQLEHH--NLFPDSIVFHPLTIPPVN 68 (442)
T ss_pred CCCCCEEEEecCccccHHHHHHHHHHHHHhCCCE--EEEEeccc--------hhhhhhcc--cCCCCceEEEEeCCCCcc
Confidence 53 5699999999999999999999999999976 99999762 22222110 011235667655421
Q ss_pred CCCCCCCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHH
Q 039408 77 DPPSPDQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASF 155 (456)
Q Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 155 (456)
..|++.+. .+....+..++....+.+.+.++++++. .++||||+| ++.|+.++|+++|||++.|++++++.
T Consensus 69 gLp~g~~~~~~l~~~l~~~~~~~~~~~~~~l~~~L~~-------~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~ 140 (442)
T PLN02208 69 GLPAGAETTSDIPISMDNLLSEALDLTRDQVEAAVRA-------LRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATT 140 (442)
T ss_pred CCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhh-------CCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHH
Confidence 23544332 1221122233333345666667777653 378999999 58999999999999999999999986
Q ss_pred HHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCC---CCCCCCChhhhccccccHHHHHHH-HHhhccCCe
Q 039408 156 LGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANP---LPPSVLPSTVLKRKRDGYVWYLRH-AARYMETEG 231 (456)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 231 (456)
++ +++.+. .. . ...+|++|.. ++..+++.+ ......+..+.+. .....++++
T Consensus 141 ~~-~~~~~~----~~---------~--------~~~~pglp~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 196 (442)
T PLN02208 141 IA-HTHVPG----GK---------L--------GVPPPGYPSSKVLFRENDAHAL--ATLSIFYKRLYHQITTGLKSCDV 196 (442)
T ss_pred HH-HHccCc----cc---------c--------CCCCCCCCCcccccCHHHcCcc--cccchHHHHHHHHHHhhhccCCE
Confidence 54 444321 00 0 1124666531 345566642 1111223333332 245668899
Q ss_pred EEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHH
Q 039408 232 IVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLRE 311 (456)
Q Consensus 232 ~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~ 311 (456)
+++|||+|||+++++++++.+.+++++|||++..... + ...+.+|.+|||+++++|||||||||+..++.+++.+
T Consensus 197 vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~--~---~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e 271 (442)
T PLN02208 197 IALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDT--S---KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQE 271 (442)
T ss_pred EEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCC--C---CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHH
Confidence 9999999999999999987666899999999864321 0 1346789999999988999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEEeCC-CC--CccCCCCc------cccccccccCchh----------HHhhcCCcee--EEeeCcc
Q 039408 312 IAIGLQRVGFRFLWSIREP-SK--SKIYLPGE------YTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVP 370 (456)
Q Consensus 312 l~~al~~~~~~~vw~~~~~-~~--~~~~~~~~------~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP 370 (456)
++.+|+.++.+|+|+++.+ .. ....+|.+ ..|+.+.+|+||. |++|+|.+++ |+++|||
T Consensus 272 ~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP 351 (442)
T PLN02208 272 LCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQ 351 (442)
T ss_pred HHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCC
Confidence 9999999999999999954 11 00112311 1466677899985 8889888888 9999999
Q ss_pred eeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC----hHHHHHHHHHHHHHHHhhcc
Q 039408 371 IATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD----DEVRKKVKEMREKSRTAVME 446 (456)
Q Consensus 371 ~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~----~~~r~~A~~l~~~~~~a~~~ 446 (456)
||+||+++||+.||+++++.||+|+.+.+++ + +.+++++|+++|+++|+++ +++|+||+++++.++ +
T Consensus 352 ~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~--~---~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~ 422 (442)
T PLN02208 352 MVLIPFLSDQVLFTRLMTEEFEVSVEVSREK--T---GWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----S 422 (442)
T ss_pred EEecCcchhhHHHHHHHHHHhceeEEecccc--C---CcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----c
Confidence 9999999999999999988789999997531 1 3599999999999999621 369999999998873 4
Q ss_pred CCCchhccC
Q 039408 447 EGSSNKSLG 455 (456)
Q Consensus 447 gGss~~~~~ 455 (456)
||||++||+
T Consensus 423 ~gsS~~~l~ 431 (442)
T PLN02208 423 PGLLTGYVD 431 (442)
T ss_pred CCcHHHHHH
Confidence 789999986
No 18
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=5.6e-58 Score=465.93 Aligned_cols=425 Identities=24% Similarity=0.366 Sum_probs=295.5
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccc---cCCCCCceEEEeCCCC--
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALA---TTTDAHNINFVYLPSV-- 76 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~l~~~-- 76 (456)
++.||+++|+|++||++|+++||++|++|||+ |||++++.+. ..++...... .......+.+++++..
T Consensus 4 ~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~--VT~vtt~~~~-----~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~ 76 (482)
T PLN03007 4 EKLHILFFPFMAHGHMIPTLDMAKLFSSRGAK--STILTTPLNA-----KIFEKPIEAFKNLNPGLEIDIQIFNFPCVEL 76 (482)
T ss_pred CCcEEEEECCCccccHHHHHHHHHHHHhCCCE--EEEEECCCch-----hhhhhhhhhhcccCCCCcceEEEeeCCCCcC
Confidence 45699999999999999999999999999976 9999987322 1122111000 0000113555556531
Q ss_pred CCCCCCCCC---------ChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEE
Q 039408 77 DPPSPDQYK---------STLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYL 147 (456)
Q Consensus 77 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~ 147 (456)
..|++.+.. ....++..+. ...+.+...++++++. .++||||+|.++.|+.++|+++|||+++
T Consensus 77 glP~g~e~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~l~~-------~~~~~IV~D~~~~w~~~vA~~lgIP~v~ 148 (482)
T PLN03007 77 GLPEGCENVDFITSNNNDDSGDLFLKFL-FSTKYFKDQLEKLLET-------TRPDCLVADMFFPWATEAAEKFGVPRLV 148 (482)
T ss_pred CCCCCcccccccccccccchHHHHHHHH-HHHHHHHHHHHHHHhc-------CCCCEEEECCcchhHHHHHHHhCCCeEE
Confidence 234443321 0112233333 3335666777777653 4789999999999999999999999999
Q ss_pred EecccHHHHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCC--CCCCCCChhhhccccccHHHHHHHHHh
Q 039408 148 YFASPASFLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANP--LPPSVLPSTVLKRKRDGYVWYLRHAAR 225 (456)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~ 225 (456)
|++++++.++.+++......... . ......+.+|++|.. ++..+++.. .........+......
T Consensus 149 f~~~~a~~~~~~~~~~~~~~~~~---------~---~~~~~~~~~pg~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 214 (482)
T PLN03007 149 FHGTGYFSLCASYCIRVHKPQKK---------V---ASSSEPFVIPDLPGDIVITEEQINDA--DEESPMGKFMKEVRES 214 (482)
T ss_pred eecccHHHHHHHHHHHhcccccc---------c---CCCCceeeCCCCCCccccCHHhcCCC--CCchhHHHHHHHHHhh
Confidence 99999887766554321110000 0 111112346777532 233344421 1001112223333345
Q ss_pred hccCCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCC-----CCCCCCCChhhHHhhhccCCCCeEEEEeccC
Q 039408 226 YMETEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPA-----QWHPDRVHHESIMKWLDDQPPSSVVFLCFGS 300 (456)
Q Consensus 226 ~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~-----~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS 300 (456)
..+++++++||+++||+++.+++++....++++|||+....... ..+.....+.+|.+|||+++++|||||||||
T Consensus 215 ~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS 294 (482)
T PLN03007 215 EVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGS 294 (482)
T ss_pred cccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecC
Confidence 66788999999999999999988764446799999986432110 0000001246799999999889999999999
Q ss_pred CcCCCHHHHHHHHHHHHhcCCeEEEEEeCCCC---CccCCCC------ccccccccccCchh----------HHhhcCCc
Q 039408 301 MGSFVGPQLREIAIGLQRVGFRFLWSIREPSK---SKIYLPG------EYTNLKVKEMLPEG----------FLNRTAGV 361 (456)
Q Consensus 301 ~~~~~~~~~~~l~~al~~~~~~~vw~~~~~~~---~~~~~~~------~~~n~~~~~~lP~~----------f~~~~g~~ 361 (456)
+...+.+++.+++.+|+.++++|||+++.... ....+|. .+.|+++.+|+||. |++|+|.+
T Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~n 374 (482)
T PLN03007 295 VASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWN 374 (482)
T ss_pred CcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcch
Confidence 99999999999999999999999999996411 1112442 24577888999985 78888877
Q ss_pred ee--EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh---HHHHHHHHH
Q 039408 362 GL--SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD---EVRKKVKEM 436 (456)
Q Consensus 362 G~--al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~---~~r~~A~~l 436 (456)
++ |+++|||||+||+++||+.||+++++.|++|+.+.....-..+.+.+++++|+++|+++|. ++ +||+||+++
T Consensus 375 S~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~-~~~~~~~r~~a~~~ 453 (482)
T PLN03007 375 SLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIV-GEEAEERRLRAKKL 453 (482)
T ss_pred HHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhc-CcHHHHHHHHHHHH
Confidence 77 9999999999999999999999999878888887421000000146899999999999997 55 999999999
Q ss_pred HHHHHHhhccCCCchhccCC
Q 039408 437 REKSRTAVMEEGSSNKSLGS 456 (456)
Q Consensus 437 ~~~~~~a~~~gGss~~~~~~ 456 (456)
++.+++|+++||||++||++
T Consensus 454 ~~~a~~a~~~gGsS~~~l~~ 473 (482)
T PLN03007 454 AEMAKAAVEEGGSSFNDLNK 473 (482)
T ss_pred HHHHHHHHhCCCcHHHHHHH
Confidence 99999999999999999863
No 19
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=7.7e-58 Score=458.22 Aligned_cols=405 Identities=20% Similarity=0.269 Sum_probs=286.3
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCC---CC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVD---PP 79 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~---~~ 79 (456)
++||+++|+|++||++||++||+.|+.|| ++|||++++.+. ....... .....+|+|+.++... .|
T Consensus 6 ~~HVvl~P~paqGHi~P~l~LAk~La~~G--~~vT~v~t~~n~-----~~~~~~~----~~~~~~i~~~~lp~p~~dglp 74 (472)
T PLN02670 6 VLHVAMFPWLAMGHLIPFLRLSKLLAQKG--HKISFISTPRNL-----HRLPKIP----SQLSSSITLVSFPLPSVPGLP 74 (472)
T ss_pred CcEEEEeCChhhhHHHHHHHHHHHHHhCC--CEEEEEeCCchH-----Hhhhhcc----ccCCCCeeEEECCCCccCCCC
Confidence 56999999999999999999999999999 559999987432 1122111 0112469999887321 34
Q ss_pred CCCCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHH
Q 039408 80 SPDQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGF 158 (456)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 158 (456)
++.+. .+.......++......++..++++++. .+++|||+|.++.|+.++|+++|||+++|++++++.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~ 147 (472)
T PLN02670 75 SSAESSTDVPYTKQQLLKKAFDLLEPPLTTFLET-------SKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSF 147 (472)
T ss_pred CCcccccccchhhHHHHHHHHHHhHHHHHHHHHh-------CCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHH
Confidence 44332 1221111123333445667777777764 368999999999999999999999999999999988887
Q ss_pred HhhcccccccccccccccCCccccCCCCCCce-ecCCCCC-----CCCCCCCChhhhccc-c-ccHHHHHHHHHhhccCC
Q 039408 159 MLHFPNIDAQIANEFVESNTDFFVPKDSTTEL-VIPSFAN-----PLPPSVLPSTVLKRK-R-DGYVWYLRHAARYMETE 230 (456)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~-----~~~~~~l~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 230 (456)
+++...+...+.. ......+ .+|++.+ .++..++|.++.... . .....+.+......+++
T Consensus 148 ~~~~~~~~~~~~~------------~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (472)
T PLN02670 148 IGPPSSLMEGGDL------------RSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSD 215 (472)
T ss_pred HhhhHhhhhcccC------------CCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCC
Confidence 6654322222211 1111111 2444311 134457776553211 1 12344445555566789
Q ss_pred eEEecccccccHHHHHHHHcCCCCCeEEecccccCC-CCCCCCCCC-CChhhHHhhhccCCCCeEEEEeccCCcCCCHHH
Q 039408 231 GIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLN-GPAQWHPDR-VHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQ 308 (456)
Q Consensus 231 ~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~-~~~~~~~~~-~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~ 308 (456)
++++|||++||+++++++++...+++|+|||+.... ....+.... ....+|.+|||+++++|||||||||+..++.++
T Consensus 216 gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q 295 (472)
T PLN02670 216 VVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREE 295 (472)
T ss_pred EEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHH
Confidence 999999999999999999764446899999997531 110000000 112579999999988999999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEeCCCCC-ccCCCCcccc---------ccccccCchh----------HHhhcCCcee--EEe
Q 039408 309 LREIAIGLQRVGFRFLWSIREPSKS-KIYLPGEYTN---------LKVKEMLPEG----------FLNRTAGVGL--SLW 366 (456)
Q Consensus 309 ~~~l~~al~~~~~~~vw~~~~~~~~-~~~~~~~~~n---------~~~~~~lP~~----------f~~~~g~~G~--al~ 366 (456)
+++++.+|+.++++|||+++..... .......|+| +.+.+|+||. |++|+|.+++ |++
T Consensus 296 ~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~ 375 (472)
T PLN02670 296 VTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLG 375 (472)
T ss_pred HHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHH
Confidence 9999999999999999999963110 0001112333 4556899985 8888888888 999
Q ss_pred eCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHH
Q 039408 367 YGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD--DEVRKKVKEMREKSRT 442 (456)
Q Consensus 367 ~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~r~~A~~l~~~~~~ 442 (456)
+|||||+||+++||+.||+++++ ||+|+.+...+. .+.+++++|+++|+++|.++ ++||+||+++++.+++
T Consensus 376 ~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~~~----~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~ 448 (472)
T PLN02670 376 FGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRDER----DGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD 448 (472)
T ss_pred cCCCEEeCcchhccHHHHHHHHH-cCeeEEeecccc----CCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC
Confidence 99999999999999999999987 599999975321 14689999999999999722 3899999999999985
No 20
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-57 Score=453.50 Aligned_cols=398 Identities=21% Similarity=0.274 Sum_probs=282.3
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCC-CCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVD-PPSP 81 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~-~~~~ 81 (456)
++||+++|+|++||++||++||+.|+.+|+ +|||+|++.+. ..+.... .......++++++|..+ .|++
T Consensus 5 ~~Hvvl~P~paqGHi~P~l~LAk~La~~g~--~vT~~tt~~~~-----~~~~~~~---~~~~~~~v~~~~~p~~~glp~g 74 (453)
T PLN02764 5 KFHVLMYPWFATGHMTPFLFLANKLAEKGH--TVTFLLPKKAL-----KQLEHLN---LFPHNIVFRSVTVPHVDGLPVG 74 (453)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCC--EEEEEeCcchh-----hhhcccc---cCCCCceEEEEECCCcCCCCCc
Confidence 679999999999999999999999999994 59999987421 1222110 00111237777777322 3555
Q ss_pred CCC-CC-hHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHH
Q 039408 82 DQY-KS-TLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFM 159 (456)
Q Consensus 82 ~~~-~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 159 (456)
.+. .+ +......+.... ..++..++++++. .+++|||+|. +.|+.++|+++|||++.|++++++.++++
T Consensus 75 ~e~~~~~~~~~~~~~~~a~-~~~~~~~~~~l~~-------~~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~ 145 (453)
T PLN02764 75 TETVSEIPVTSADLLMSAM-DLTRDQVEVVVRA-------VEPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASM 145 (453)
T ss_pred ccccccCChhHHHHHHHHH-HHhHHHHHHHHHh-------CCCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHH
Confidence 332 11 112122233322 3556777777764 3679999995 89999999999999999999999888776
Q ss_pred hhcccccccccccccccCCccccCCCCCCceecCCCCC---CCCCCCCChhhhc-c-cc-ccH-HHHHHHHHhhccCCeE
Q 039408 160 LHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFAN---PLPPSVLPSTVLK-R-KR-DGY-VWYLRHAARYMETEGI 232 (456)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~l~~~~~~-~-~~-~~~-~~~~~~~~~~~~~~~~ 232 (456)
.+ + .+. + ...+||+|. .++.++++..... . .. ... ..+.+......+++++
T Consensus 146 ~~-~----~~~---------~--------~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~v 203 (453)
T PLN02764 146 LV-P----GGE---------L--------GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVI 203 (453)
T ss_pred hc-c----ccc---------C--------CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEE
Confidence 53 1 011 0 011366653 2445556543210 0 01 112 2333333556788999
Q ss_pred EecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHH
Q 039408 233 VVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREI 312 (456)
Q Consensus 233 l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l 312 (456)
++|||+|||+++++++++...+++|+|||++...... . ..+.+|.+|||+|+++|||||||||+..++.+|+.++
T Consensus 204 lvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~--~---~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~el 278 (453)
T PLN02764 204 AIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKT--R---ELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQEL 278 (453)
T ss_pred EEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcccc--c---cchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHH
Confidence 9999999999999999763346899999997532110 0 2346799999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEEEeCCCC-C--ccCCCCcc------ccccccccCchh----------HHhhcCCcee--EEeeCcce
Q 039408 313 AIGLQRVGFRFLWSIREPSK-S--KIYLPGEY------TNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPI 371 (456)
Q Consensus 313 ~~al~~~~~~~vw~~~~~~~-~--~~~~~~~~------~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~ 371 (456)
+.+|+.++.+|+|+++.+.. . ...+|.+- ..+.+.+|+||. |++|+|.+++ |+++||||
T Consensus 279 a~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~ 358 (453)
T PLN02764 279 CLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQI 358 (453)
T ss_pred HHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCE
Confidence 99999999999999996311 0 11133111 123345899985 7788777777 99999999
Q ss_pred eccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC----hHHHHHHHHHHHHHHHhhccC
Q 039408 372 ATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD----DEVRKKVKEMREKSRTAVMEE 447 (456)
Q Consensus 372 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~----~~~r~~A~~l~~~~~~a~~~g 447 (456)
|+||+++||+.||+++++.||+|+.+..+. .+.+++++|+++|+++|.++ +++|+||+++++.++ +|
T Consensus 359 l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~-----~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~ 429 (453)
T PLN02764 359 VLVPQLGDQVLNTRLLSDELKVSVEVAREE-----TGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SP 429 (453)
T ss_pred EeCCcccchHHHHHHHHHHhceEEEecccc-----CCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hc
Confidence 999999999999999987789999986321 03589999999999999721 258888888888874 68
Q ss_pred CCchhccC
Q 039408 448 GSSNKSLG 455 (456)
Q Consensus 448 Gss~~~~~ 455 (456)
|||+.|++
T Consensus 430 GSS~~~l~ 437 (453)
T PLN02764 430 GLLTGYVD 437 (453)
T ss_pred CCHHHHHH
Confidence 99999886
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-57 Score=456.46 Aligned_cols=390 Identities=20% Similarity=0.250 Sum_probs=276.7
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCC--CC-CC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLP--SV-DP 78 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~--~~-~~ 78 (456)
+++||+++|+|++||++||++||+.|+++|+. |||+|++.+ ...+.... ...++++|+.++ .. ..
T Consensus 3 ~~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~--VT~vtt~~~-----~~~i~~~~-----~~~~~i~~~~i~lP~~dGL 70 (446)
T PLN00414 3 SKFHAFMYPWFGFGHMIPYLHLANKLAEKGHR--VTFFLPKKA-----HKQLQPLN-----LFPDSIVFEPLTLPPVDGL 70 (446)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHHHhCCCE--EEEEeCCch-----hhhhcccc-----cCCCceEEEEecCCCcCCC
Confidence 46799999999999999999999999999965 999998622 11222111 112358885553 21 23
Q ss_pred CCCCCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHH
Q 039408 79 PSPDQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLG 157 (456)
Q Consensus 79 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 157 (456)
|++.+. .+.......++....+.+...++++++. .+|||||+|. +.|+.++|+++|||++.|++++++.++
T Consensus 71 P~g~e~~~~l~~~~~~~~~~a~~~l~~~l~~~L~~-------~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~ 142 (446)
T PLN00414 71 PFGAETASDLPNSTKKPIFDAMDLLRDQIEAKVRA-------LKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVA 142 (446)
T ss_pred CCcccccccchhhHHHHHHHHHHHHHHHHHHHHhc-------CCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHH
Confidence 444332 1111111222223334666667766653 3689999995 899999999999999999999998888
Q ss_pred HHhhcccccccccccccccCCccccCCCCCCceecCCCCC---CCCCCC--CChhhhccccccHHHHHHHHHhhccCCeE
Q 039408 158 FMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFAN---PLPPSV--LPSTVLKRKRDGYVWYLRHAARYMETEGI 232 (456)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (456)
++.+.. . . . ...+|++|. .++..+ ++..+.. ....+.+......+++++
T Consensus 143 ~~~~~~--~---~---------~--------~~~~pg~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v 196 (446)
T PLN00414 143 MVLAPR--A---E---------L--------GFPPPDYPLSKVALRGHDANVCSLFAN----SHELFGLITKGLKNCDVV 196 (446)
T ss_pred HHhCcH--h---h---------c--------CCCCCCCCCCcCcCchhhcccchhhcc----cHHHHHHHHHhhccCCEE
Confidence 766521 0 0 0 011245542 122222 2222211 123344455566788999
Q ss_pred EecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHH
Q 039408 233 VVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREI 312 (456)
Q Consensus 233 l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l 312 (456)
++|||++||+.+++++++...+++|+|||+....... + ....+.+|.+|||+|+++|||||||||+..++.+|+.++
T Consensus 197 lvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~-~--~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~ 273 (446)
T PLN00414 197 SIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNK-S--GKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEF 273 (446)
T ss_pred EEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccc-c--CcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHH
Confidence 9999999999999999874456799999997532110 0 012245799999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEEEeCCCC-C--ccCCCCccccc---------cccccCchh----------HHhhcCCcee--EEeeC
Q 039408 313 AIGLQRVGFRFLWSIREPSK-S--KIYLPGEYTNL---------KVKEMLPEG----------FLNRTAGVGL--SLWYG 368 (456)
Q Consensus 313 ~~al~~~~~~~vw~~~~~~~-~--~~~~~~~~~n~---------~~~~~lP~~----------f~~~~g~~G~--al~~G 368 (456)
+.+|+.+|.+|+|+++.+.. + ...+| +|+ .+.+|+||. |++|+|.+++ |+++|
T Consensus 274 a~gL~~s~~~Flwvvr~~~~~~~~~~~lp---~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~G 350 (446)
T PLN00414 274 CLGMELTGLPFLIAVMPPKGSSTVQEALP---EGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSD 350 (446)
T ss_pred HHHHHHcCCCeEEEEecCCCcccchhhCC---hhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcC
Confidence 99999999999999987411 1 11223 332 234799985 7777777777 99999
Q ss_pred cceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC----hHHHHHHHHHHHHHHHhh
Q 039408 369 VPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD----DEVRKKVKEMREKSRTAV 444 (456)
Q Consensus 369 VP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~----~~~r~~A~~l~~~~~~a~ 444 (456)
||||+||+++||+.||+++++.||+|+++.+++ + +.+++++|+++|+++|.++ ++||+||+++++.+ +
T Consensus 351 vP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~--~---~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~---~ 422 (446)
T PLN00414 351 CQIVFIPQLADQVLITRLLTEELEVSVKVQRED--S---GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETL---V 422 (446)
T ss_pred CCEEecCcccchHHHHHHHHHHhCeEEEecccc--C---CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH---H
Confidence 999999999999999999987789999997421 1 3589999999999999621 25999999999986 4
Q ss_pred ccCC-Cch
Q 039408 445 MEEG-SSN 451 (456)
Q Consensus 445 ~~gG-ss~ 451 (456)
++|| ||+
T Consensus 423 ~~gg~ss~ 430 (446)
T PLN00414 423 SPGLLSGY 430 (446)
T ss_pred cCCCcHHH
Confidence 7788 444
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=6.6e-36 Score=304.82 Aligned_cols=371 Identities=15% Similarity=0.169 Sum_probs=239.8
Q ss_pred EEEEE-cCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCC--C--
Q 039408 5 RVVLI-CTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDP--P-- 79 (456)
Q Consensus 5 ~il~~-~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~--~-- 79 (456)
+|+++ |.++.+|..-+-.|+++|++|||+ ||++++. +.. .... ....+++.+.++.... .
T Consensus 22 kIl~~~P~~~~SH~~~~~~l~~~La~rGH~--VTvi~p~-~~~-----~~~~-------~~~~~~~~i~~~~~~~~~~~~ 86 (507)
T PHA03392 22 RILAVFPTPAYSHHSVFKVYVEALAERGHN--VTVIKPT-LRV-----YYAS-------HLCGNITEIDASLSVEYFKKL 86 (507)
T ss_pred cEEEEcCCCCCcHHHHHHHHHHHHHHcCCe--EEEEecc-ccc-----cccc-------CCCCCEEEEEcCCChHHHHHH
Confidence 47655 889999999999999999999999 9999864 100 0000 0123455555431100 0
Q ss_pred -CCCC---C-C---ChHHHH----HHHHHHhchhH-HHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHh-CCCe
Q 039408 80 -SPDQ---Y-K---STLGYL----SLFIEKHKPHV-KNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQL-GIPC 145 (456)
Q Consensus 80 -~~~~---~-~---~~~~~~----~~~~~~~~~~~-~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~l-giP~ 145 (456)
.... . . +..... ..+...+...+ ...+.++++. ...++|+||+|.+..++..+|+.+ ++|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~-----~~~kFDlvi~e~~~~c~~~la~~~~~~p~ 161 (507)
T PHA03392 87 VKSSAVFRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIAN-----KNNKFDLLVTEAFLDYPLVFSHLFGDAPV 161 (507)
T ss_pred HhhhhHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhc-----CCCceeEEEecccchhHHHHHHHhCCCCE
Confidence 0000 0 0 000000 11111222222 1223444441 125799999999999999999999 9998
Q ss_pred EEEecccHHHHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCC----CCC-CCCChhhhc---c----c-
Q 039408 146 YLYFASPASFLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANP----LPP-SVLPSTVLK---R----K- 212 (456)
Q Consensus 146 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----~~~-~~l~~~~~~---~----~- 212 (456)
|.++++........ . . +..| .....+|.+... +.+ .++..++.. . .
T Consensus 162 i~~ss~~~~~~~~~-~----~--gg~p--------------~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~ 220 (507)
T PHA03392 162 IQISSGYGLAENFE-T----M--GAVS--------------RHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLL 220 (507)
T ss_pred EEEcCCCCchhHHH-h----h--ccCC--------------CCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 87766543211110 0 0 1001 001122322111 110 011111100 0 0
Q ss_pred cccHHHH-HHHHH--------hhccCCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHh
Q 039408 213 RDGYVWY-LRHAA--------RYMETEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMK 283 (456)
Q Consensus 213 ~~~~~~~-~~~~~--------~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~ 283 (456)
....+.+ .+.+. ..++...+++|+...++.+ + .++|+++.|||++.+... ..+.++++.+
T Consensus 221 ~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~-----r-p~~p~v~~vGgi~~~~~~-----~~~l~~~l~~ 289 (507)
T PHA03392 221 ADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN-----R-PVPPSVQYLGGLHLHKKP-----PQPLDDYLEE 289 (507)
T ss_pred hHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC-----C-CCCCCeeeecccccCCCC-----CCCCCHHHHH
Confidence 0000111 11111 1124467889998877753 3 488999999999874321 1156788999
Q ss_pred hhccCCCCeEEEEeccCCc---CCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh-------
Q 039408 284 WLDDQPPSSVVFLCFGSMG---SFVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG------- 353 (456)
Q Consensus 284 wLd~~~~~~vVyvsfGS~~---~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~------- 353 (456)
|++++ ++++|||||||+. .++.+.++.+++++++.+.+|||+++..... .+.|+|+++.+|+||.
T Consensus 290 fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~----~~~p~Nv~i~~w~Pq~~lL~hp~ 364 (507)
T PHA03392 290 FLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEA----INLPANVLTQKWFPQRAVLKHKN 364 (507)
T ss_pred HHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCc----ccCCCceEEecCCCHHHHhcCCC
Confidence 99986 4589999999985 3577889999999999999999999864211 1467899999999986
Q ss_pred ---HHhhcCCcee--EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 354 ---FLNRTAGVGL--SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 354 ---f~~~~g~~G~--al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|++|+|.+++ |+++|||+|++|+++||+.||+|+++. |+|+.+++ ..++.++|++||+++|+ |++
T Consensus 365 v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~--------~~~t~~~l~~ai~~vl~-~~~ 434 (507)
T PHA03392 365 VKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALDT--------VTVSAAQLVLAIVDVIE-NPK 434 (507)
T ss_pred CCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEecc--------CCcCHHHHHHHHHHHhC-CHH
Confidence 6666666666 999999999999999999999999997 99999986 46899999999999998 999
Q ss_pred HHHHHHHHHHHHHH
Q 039408 429 VRKKVKEMREKSRT 442 (456)
Q Consensus 429 ~r~~A~~l~~~~~~ 442 (456)
||+||+++++.+++
T Consensus 435 y~~~a~~ls~~~~~ 448 (507)
T PHA03392 435 YRKNLKELRHLIRH 448 (507)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999996
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=6.7e-39 Score=331.22 Aligned_cols=169 Identities=22% Similarity=0.389 Sum_probs=134.6
Q ss_pred CCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHH-HHHHHHHHHhcCCeEEEEEeCC
Q 039408 252 GMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQ-LREIAIGLQRVGFRFLWSIREP 330 (456)
Q Consensus 252 ~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~-~~~l~~al~~~~~~~vw~~~~~ 330 (456)
+.|++++||+++....+ +.+.+++.|+++..+++||||||||+....+++ +++++++|++++.+|||++++.
T Consensus 244 ~~p~v~~vGgl~~~~~~-------~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~ 316 (500)
T PF00201_consen 244 LLPNVVEVGGLHIKPAK-------PLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGE 316 (500)
T ss_dssp HHCTSTTGCGC-S-----------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCS
T ss_pred hhhcccccCcccccccc-------ccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCccccccccc
Confidence 45789999999775432 578889999998557899999999997544444 7889999999999999999875
Q ss_pred CCCccCCCCccccccccccCchh----------HHhhcCCcee--EEeeCcceeccccccccchhHHHHHHhhcceEEec
Q 039408 331 SKSKIYLPGEYTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIR 398 (456)
Q Consensus 331 ~~~~~~~~~~~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 398 (456)
. ....++|+++.+|+||. |++|+|..++ |+++|||||++|+++||+.||+++++. |+|+.++
T Consensus 317 ~-----~~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~ 390 (500)
T PF00201_consen 317 P-----PENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLD 390 (500)
T ss_dssp H-----GCHHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEG
T ss_pred c-----cccccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEE
Confidence 1 12356899999999985 7888887777 999999999999999999999999998 9999999
Q ss_pred ccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 399 LDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 399 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
+ ..+|.++|.++|+++|+ |++||+||+++++.+++
T Consensus 391 ~--------~~~~~~~l~~ai~~vl~-~~~y~~~a~~ls~~~~~ 425 (500)
T PF00201_consen 391 K--------NDLTEEELRAAIREVLE-NPSYKENAKRLSSLFRD 425 (500)
T ss_dssp G--------GC-SHHHHHHHHHHHHH-SHHHHHHHHHHHHTTT-
T ss_pred e--------cCCcHHHHHHHHHHHHh-hhHHHHHHHHHHHHHhc
Confidence 6 47999999999999998 99999999999999986
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=7.8e-36 Score=308.26 Aligned_cols=392 Identities=22% Similarity=0.289 Sum_probs=238.3
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEE---EeCCCC---
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINF---VYLPSV--- 76 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~l~~~--- 76 (456)
+.|++++++|++||++|++.||++|+++||+ ||++++.... ..... ......+.. ...+..
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~--vt~~~~~~~~--------~~~~~---~~~~~~~~~~~~~~~~~~~~~ 71 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHN--VTVVTPSFNA--------LKLSK---SSKSKSIKKINPPPFEFLTIP 71 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCc--eEEEEeechh--------cccCC---cccceeeeeeecChHHhhhhh
Confidence 3689999999999999999999999999999 9999976321 11100 000001111 111100
Q ss_pred -CCCCCCCCC--ChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhC-CCeEEEeccc
Q 039408 77 -DPPSPDQYK--STLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLG-IPCYLYFASP 152 (456)
Q Consensus 77 -~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lg-iP~v~~~~~~ 152 (456)
..+.+.+.. ........+...+...++.....+... ...++||+|+|.+..|...+|...+ ++...+++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~ 146 (496)
T KOG1192|consen 72 DGLPEGWEDDDLDISESLLELNKTCEDLLRDPLEKLLLL-----KSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSS 146 (496)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHh-----hcCCccEEEechhhHHHHHhcccceEEEeecccCch
Confidence 011111100 011112334444455555544444432 2234999999999888888887775 9998888888
Q ss_pred HHHHHHHhhcccccccccccccccCCccccCC-CCCCceecCCCCCCCCCCCCChhhhccccc-cHHHHHH-HHHh----
Q 039408 153 ASFLGFMLHFPNIDAQIANEFVESNTDFFVPK-DSTTELVIPSFANPLPPSVLPSTVLKRKRD-GYVWYLR-HAAR---- 225 (456)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~~-~~~~---- 225 (456)
+.......+.+.. ..|. .. . .....+.+++....+....++......... ....... ....
T Consensus 147 ~~~~~~g~~~~~~----~~p~-----~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (496)
T KOG1192|consen 147 AVLLALGLPSPLS----YVPS-----PF---SLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNW 214 (496)
T ss_pred HHHHhcCCcCccc----ccCc-----cc---CccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccc
Confidence 7655443332211 1110 00 0 000000000000000000000000000000 0000000 0000
Q ss_pred hccCCeEEecc-cccccHHHHHHH-HcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCC--eEEEEeccCC
Q 039408 226 YMETEGIVVNT-FQELEPYAIESI-SVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPS--SVVFLCFGSM 301 (456)
Q Consensus 226 ~~~~~~~l~~s-~~~le~~~~~~~-~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~--~vVyvsfGS~ 301 (456)
.....+++.|+ +..++......+ .....+++++|||++..... ...+.+.+|++..+.. +||||||||+
T Consensus 215 ~~~~~~i~~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~-------~~~~~~~~wl~~~~~~~~~vvyvSfGS~ 287 (496)
T KOG1192|consen 215 KPTASGIIVNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSK-------QKSPLPLEWLDILDESRHSVVYISFGSM 287 (496)
T ss_pred cccHHHhhhcCeEEEEccCcccCCCCCCCCCCceEECcEEecCcc-------ccccccHHHHHHHhhccCCeEEEECCcc
Confidence 01222455666 777776665444 22247899999999986321 1112577888877665 9999999999
Q ss_pred c---CCCHHHHHHHHHHHHhc-CCeEEEEEeCCCCCc--cCCCC-ccccccccccCchh-----------HHhhcCCcee
Q 039408 302 G---SFVGPQLREIAIGLQRV-GFRFLWSIREPSKSK--IYLPG-EYTNLKVKEMLPEG-----------FLNRTAGVGL 363 (456)
Q Consensus 302 ~---~~~~~~~~~l~~al~~~-~~~~vw~~~~~~~~~--~~~~~-~~~n~~~~~~lP~~-----------f~~~~g~~G~ 363 (456)
. .++.+++.+++.+|+.+ +++|+|+++...... ..+++ .++|+...+|+||. |++|+|.+++
T Consensus 288 ~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt 367 (496)
T KOG1192|consen 288 VNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNST 367 (496)
T ss_pred cccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHH
Confidence 8 79999999999999999 899999999752110 01222 25688888899985 6677777777
Q ss_pred --EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 364 --SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 364 --al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
++++|||||++|+++||+.||++++++|++++.... ..+.+.+.+++++++. +++|+++|+++++..+
T Consensus 368 ~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~---------~~~~~~~~~~~~~il~-~~~y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 368 LESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKR---------DLVSEELLEAIKEILE-NEEYKEAAKRLSEILR 437 (496)
T ss_pred HHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehh---------hcCcHHHHHHHHHHHc-ChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999555555553 3555559999999998 9999999999999876
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=8.1e-34 Score=284.35 Aligned_cols=350 Identities=16% Similarity=0.207 Sum_probs=221.6
Q ss_pred EcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCC-CCCC---
Q 039408 9 ICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPS-PDQY--- 84 (456)
Q Consensus 9 ~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~~~--- 84 (456)
+.+|+.||++|+++||++|.++||+ |+|++++ .+.+.+. ..+++|++++...... ..+.
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~--V~~~~~~--------~~~~~v~-------~~G~~~~~~~~~~~~~~~~~~~~~ 63 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHR--VTYATTE--------EFAERVE-------AAGAEFVLYGSALPPPDNPPENTE 63 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCe--EEEEeCH--------HHHHHHH-------HcCCEEEecCCcCccccccccccC
Confidence 4689999999999999999999988 9999987 4555544 3468888887543111 1100
Q ss_pred CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHHhhccc
Q 039408 85 KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFMLHFPN 164 (456)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 164 (456)
.+.......+.......+... .++++ ..+|||||+|.+++++..+|+++|||+|.+++..... ...+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l-~~~~~-------~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~~ 131 (392)
T TIGR01426 64 EEPIDIIEKLLDEAEDVLPQL-EEAYK-------GDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEFEE 131 (392)
T ss_pred cchHHHHHHHHHHHHHHHHHH-HHHhc-------CCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----ccccc
Confidence 122222233333222233222 22332 3589999999999999999999999999885433210 00000
Q ss_pred ccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCCh-hhhccccccHHHHHHHHH-------hh--ccCCeEEe
Q 039408 165 IDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPS-TVLKRKRDGYVWYLRHAA-------RY--METEGIVV 234 (456)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~-------~~--~~~~~~l~ 234 (456)
.. .| + .+.+. ....... ..... ....+.+.+... .+ ......+.
T Consensus 132 ~~----~~-------~-----------~~~~~---~~~~~~~~~~~~~-~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~ 185 (392)
T TIGR01426 132 MV----SP-------A-----------GEGSA---EEGAIAERGLAEY-VARLSALLEEHGITTPPVEFLAAPRRDLNLV 185 (392)
T ss_pred cc----cc-------c-----------chhhh---hhhccccchhHHH-HHHHHHHHHHhCCCCCCHHHHhcCCcCcEEE
Confidence 00 00 0 00000 0000000 00000 000111111000 00 01111222
Q ss_pred cccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHH
Q 039408 235 NTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAI 314 (456)
Q Consensus 235 ~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~ 314 (456)
.+. +.+......++++++++||+..... +...|+...+++++|||||||+....++.++++++
T Consensus 186 ~~~-----~~l~~~~~~~~~~~~~~Gp~~~~~~------------~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~ 248 (392)
T TIGR01426 186 YTP-----KAFQPAGETFDDSFTFVGPCIGDRK------------EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVE 248 (392)
T ss_pred eCC-----hHhCCCccccCCCeEEECCCCCCcc------------ccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHH
Confidence 222 2222223336778999999865322 11237776667889999999987777778889999
Q ss_pred HHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee---EEeeCcceeccccccccchh
Q 039408 315 GLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL---SLWYGVPIATWPLYAEQQMN 383 (456)
Q Consensus 315 al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~---al~~GVP~v~~P~~~DQ~~n 383 (456)
++.+.+.++||..+..... ..+...++|+.+.+|+|+. ++. +||.|+ |+++|+|+|++|...||+.|
T Consensus 249 al~~~~~~~i~~~g~~~~~-~~~~~~~~~v~~~~~~p~~~ll~~~~~~I~-hgG~~t~~Eal~~G~P~v~~p~~~dq~~~ 326 (392)
T TIGR01426 249 AFRDLDWHVVLSVGRGVDP-ADLGELPPNVEVRQWVPQLEILKKADAFIT-HGGMNSTMEALFNGVPMVAVPQGADQPMT 326 (392)
T ss_pred HHhcCCCeEEEEECCCCCh-hHhccCCCCeEEeCCCCHHHHHhhCCEEEE-CCCchHHHHHHHhCCCEEecCCcccHHHH
Confidence 9999999999988654211 0122346788888999864 333 345554 99999999999999999999
Q ss_pred HHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 384 AFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 384 a~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
++++++. |+|+.+.. ..++.++|+++|+++|. |++||++++++++.++.
T Consensus 327 a~~l~~~-g~g~~l~~--------~~~~~~~l~~ai~~~l~-~~~~~~~~~~l~~~~~~ 375 (392)
T TIGR01426 327 ARRIAEL-GLGRHLPP--------EEVTAEKLREAVLAVLS-DPRYAERLRKMRAEIRE 375 (392)
T ss_pred HHHHHHC-CCEEEecc--------ccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 9999997 99998874 46899999999999998 89999999999999884
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=2e-33 Score=282.50 Aligned_cols=353 Identities=17% Similarity=0.152 Sum_probs=215.8
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCC----
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPP---- 79 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~---- 79 (456)
+||+|+++|+.||++|++.||++|++|||+ |+|++++ .+...+. ..+++|++++.....
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~--V~~~t~~--------~~~~~v~-------~~G~~~~~~~~~~~~~~~~ 63 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHE--VRVATPP--------EFADLVE-------AAGLEFVPVGGDPDELLAS 63 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCe--EEEeeCH--------hHHHHHH-------HcCCceeeCCCCHHHHHhh
Confidence 369999999999999999999999999998 9999987 3444443 456888888753200
Q ss_pred -CCCC--CCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHH
Q 039408 80 -SPDQ--YKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFL 156 (456)
Q Consensus 80 -~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 156 (456)
.... ..........+...........++++.+. +...+|||||+|.+.+++..+|+++|||++.+++++....
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~ 139 (401)
T cd03784 64 PERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAA----ARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPT 139 (401)
T ss_pred hhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHH----hcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCcc
Confidence 0000 00000111111111222222333333321 1236899999999999999999999999999987653211
Q ss_pred HHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCC-CCCChhhhccccccHHHHHHHHHhhccCCe----
Q 039408 157 GFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPP-SVLPSTVLKRKRDGYVWYLRHAARYMETEG---- 231 (456)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 231 (456)
+. + +.+... .......... ...........+..++..|
T Consensus 140 ~~---------------------~---------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gl~~~ 182 (401)
T cd03784 140 SA---------------------F---------------PPPLGRANLRLYALLEA-ELWQDLLGAWLRARRRRLGLPPL 182 (401)
T ss_pred cc---------------------C---------------CCccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCCC
Confidence 00 0 000000 0000000000 0000000111111111111
Q ss_pred ---------EEecccccccHHHHHHHHcCCCCCeEEec-ccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCC
Q 039408 232 ---------IVVNTFQELEPYAIESISVNGMPPVYPIG-PVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSM 301 (456)
Q Consensus 232 ---------~l~~s~~~le~~~~~~~~~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~ 301 (456)
.+... .+.+......+++....+| ++...... ...+.++..|+++ .+++|||+|||+
T Consensus 183 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~--~~~~v~v~~Gs~ 249 (401)
T cd03784 183 SLLDGSDVPELYGF-----SPAVLPPPPDWPRFDLVTGYGFRDVPYN------GPPPPELWLFLAA--GRPPVYVGFGSM 249 (401)
T ss_pred cccccCCCcEEEec-----CcccCCCCCCccccCcEeCCCCCCCCCC------CCCCHHHHHHHhC--CCCcEEEeCCCC
Confidence 11111 0111111122344555664 33322211 1345678899976 467999999999
Q ss_pred cCCCHH-HHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee--EEeeCcc
Q 039408 302 GSFVGP-QLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL--SLWYGVP 370 (456)
Q Consensus 302 ~~~~~~-~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~--al~~GVP 370 (456)
.....+ .++.+++++...+.++||+.+...... ...++|+++.+|+|+. |++|+|.+.+ ++++|||
T Consensus 250 ~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~---~~~~~~v~~~~~~p~~~ll~~~d~~I~hgG~~t~~eal~~GvP 326 (401)
T cd03784 250 VVRDPEALARLDVEAVATLGQRAILSLGWGGLGA---EDLPDNVRVVDFVPHDWLLPRCAAVVHHGGAGTTAAALRAGVP 326 (401)
T ss_pred cccCHHHHHHHHHHHHHHcCCeEEEEccCccccc---cCCCCceEEeCCCCHHHHhhhhheeeecCCchhHHHHHHcCCC
Confidence 765554 567799999999999999988652110 2346799889999875 4544444333 9999999
Q ss_pred eeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 371 IATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 371 ~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
+|++|+..||+.||+++++. |+|+.+.. ..++.++|.++|+++|+ + .++++++++++.++
T Consensus 327 ~v~~P~~~dQ~~~a~~~~~~-G~g~~l~~--------~~~~~~~l~~al~~~l~-~-~~~~~~~~~~~~~~ 386 (401)
T cd03784 327 QLVVPFFGDQPFWAARVAEL-GAGPALDP--------RELTAERLAAALRRLLD-P-PSRRRAAALLRRIR 386 (401)
T ss_pred EEeeCCCCCcHHHHHHHHHC-CCCCCCCc--------ccCCHHHHHHHHHHHhC-H-HHHHHHHHHHHHHH
Confidence 99999999999999999997 99999885 35899999999999997 5 46677777777765
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.97 E-value=5e-30 Score=254.92 Aligned_cols=359 Identities=17% Similarity=0.251 Sum_probs=212.5
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCCC
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPDQ 83 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 83 (456)
+||+++..|+.||++|+++||++|.++||+ |+|++++ .+.+.+. ..++.|..++..+.+....
T Consensus 2 mkil~~~~~~~Ghv~p~~aL~~eL~~~ghe--V~~~~~~--------~~~~~ve-------~ag~~f~~~~~~~~~~~~~ 64 (406)
T COG1819 2 MKILFVVCGAYGHVNPCLALGKELRRRGHE--VVFASTG--------KFKEFVE-------AAGLAFVAYPIRDSELATE 64 (406)
T ss_pred ceEEEEeccccccccchHHHHHHHHhcCCe--EEEEeCH--------HHHHHHH-------HhCcceeeccccCChhhhh
Confidence 459999999999999999999999999988 9999987 5666665 2346666655432111111
Q ss_pred -C-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHHhh
Q 039408 84 -Y-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFMLH 161 (456)
Q Consensus 84 -~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 161 (456)
. ......+...+.......++.++-+.+ ..+|.++.|...+.+ .+++..++|++........ .
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~ 129 (406)
T COG1819 65 DGKFAGVKSFRRLLQQFKKLIRELLELLRE--------LEPDLVVDDARLSLG-LAARLLGIPVVGINVAPYT------P 129 (406)
T ss_pred hhhhhccchhHHHhhhhhhhhHHHHHHHHh--------cchhhhhcchhhhhh-hhhhhcccchhhhhhhhcc------C
Confidence 0 000110110122222233333333433 478888877765555 8889999998775433221 1
Q ss_pred cccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCe--EEe-----
Q 039408 162 FPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEG--IVV----- 234 (456)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~----- 234 (456)
.+.. .++. ... .. ...+..+.. .+......+.... ..+ ......+...+ ...
T Consensus 130 ~~~~----~~~~----~~~---~~-~~~~~~~~~--~~~~~~~~~~~~~---~~~----~~~~~~r~~~~~~~~~~~~~~ 188 (406)
T COG1819 130 LPAA----GLPL----PPV---GI-AGKLPIPLY--PLPPRLVRPLIFA---RSW----LPKLVVRRNLGLELGLPNIRR 188 (406)
T ss_pred Cccc----ccCc----ccc---cc-ccccccccc--ccChhhccccccc---hhh----hhhhhhhhhccccccccchHH
Confidence 1100 0000 000 00 000011110 0000001000000 000 00000000000 000
Q ss_pred --cccccccHHHHHHHH---cCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHH
Q 039408 235 --NTFQELEPYAIESIS---VNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQL 309 (456)
Q Consensus 235 --~s~~~le~~~~~~~~---~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~ 309 (456)
.+-..++..+.+... ...+.....+||+... ...+...|... ++++|||||||+... .+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------~~~~~~~~~~~--d~~~vyvslGt~~~~-~~l~ 254 (406)
T COG1819 189 LFASGPLLEIAYTDVLFPPGDRLPFIGPYIGPLLGE-----------AANELPYWIPA--DRPIVYVSLGTVGNA-VELL 254 (406)
T ss_pred HhcCCCCccccccccccCCCCCCCCCcCcccccccc-----------ccccCcchhcC--CCCeEEEEcCCcccH-HHHH
Confidence 000001111000000 0112223345555432 22334455333 578999999999866 7778
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee---EEeeCcceecccccc
Q 039408 310 REIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL---SLWYGVPIATWPLYA 378 (456)
Q Consensus 310 ~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~---al~~GVP~v~~P~~~ 378 (456)
+.+.+++.+++.++|........ .+.+.|+|+++.+|+|+. |+ |+||.|+ ||++|||+|++|...
T Consensus 255 ~~~~~a~~~l~~~vi~~~~~~~~---~~~~~p~n~~v~~~~p~~~~l~~ad~vI-~hGG~gtt~eaL~~gvP~vv~P~~~ 330 (406)
T COG1819 255 AIVLEALADLDVRVIVSLGGARD---TLVNVPDNVIVADYVPQLELLPRADAVI-HHGGAGTTSEALYAGVPLVVIPDGA 330 (406)
T ss_pred HHHHHHHhcCCcEEEEecccccc---ccccCCCceEEecCCCHHHHhhhcCEEE-ecCCcchHHHHHHcCCCEEEecCCc
Confidence 89999999999999999876211 235577999999999975 44 4455555 999999999999999
Q ss_pred ccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHHh
Q 039408 379 EQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRTA 443 (456)
Q Consensus 379 DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a 443 (456)
||+.||.++++. |+|+.+.. ..++.+.|+++|++||+ ++.||++++++++++++.
T Consensus 331 DQ~~nA~rve~~-G~G~~l~~--------~~l~~~~l~~av~~vL~-~~~~~~~~~~~~~~~~~~ 385 (406)
T COG1819 331 DQPLNAERVEEL-GAGIALPF--------EELTEERLRAAVNEVLA-DDSYRRAAERLAEEFKEE 385 (406)
T ss_pred chhHHHHHHHHc-CCceecCc--------ccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhhc
Confidence 999999999997 99999996 47999999999999998 999999999999999863
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.66 E-value=3e-15 Score=147.07 Aligned_cols=314 Identities=17% Similarity=0.135 Sum_probs=175.4
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPS 80 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~ 80 (456)
|++ |++..-++-||+.|.+++|++|.++||+ |.|+++.... ...+. ...++.|..++...
T Consensus 1 ~~~--i~~~~GGTGGHi~Pala~a~~l~~~g~~--v~~vg~~~~~-------e~~l~------~~~g~~~~~~~~~~--- 60 (352)
T PRK12446 1 MKK--IVFTGGGSAGHVTPNLAIIPYLKEDNWD--ISYIGSHQGI-------EKTII------EKENIPYYSISSGK--- 60 (352)
T ss_pred CCe--EEEEcCCcHHHHHHHHHHHHHHHhCCCE--EEEEECCCcc-------ccccC------cccCCcEEEEeccC---
Confidence 776 9999999999999999999999999987 9999876221 11111 12357777665322
Q ss_pred CCCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCcc--HHHHHHHhCCCeEEEecccHHHHHH
Q 039408 81 PDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTS--MTDVANQLGIPCYLYFASPASFLGF 158 (456)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~ 158 (456)
.........+...+.... .+.+.+. +++. .+||+||..-.... +..+|..+++|++++-...
T Consensus 61 -l~~~~~~~~~~~~~~~~~-~~~~~~~-i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~------ 124 (352)
T PRK12446 61 -LRRYFDLKNIKDPFLVMK-GVMDAYV-RIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDM------ 124 (352)
T ss_pred -cCCCchHHHHHHHHHHHH-HHHHHHH-HHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCC------
Confidence 111111111222222111 2222222 3332 59999998664433 4678899999988762211
Q ss_pred HhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEecccc
Q 039408 159 MLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTFQ 238 (456)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 238 (456)
+||+.. .+. .+.++. ++-+|.
T Consensus 125 ---------------------------------~~g~~n---------r~~----------------~~~a~~-v~~~f~ 145 (352)
T PRK12446 125 ---------------------------------TPGLAN---------KIA----------------LRFASK-IFVTFE 145 (352)
T ss_pred ---------------------------------CccHHH---------HHH----------------HHhhCE-EEEEcc
Confidence 112110 000 001111 122221
Q ss_pred cccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHH-HHHHHHHHH
Q 039408 239 ELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQ-LREIAIGLQ 317 (456)
Q Consensus 239 ~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~-~~~l~~al~ 317 (456)
+- ...+. ..++..+|+-+...... ........-+.-.+++++|+|.-||.....-.+ +.+++..+.
T Consensus 146 ~~----~~~~~---~~k~~~tG~Pvr~~~~~------~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~ 212 (352)
T PRK12446 146 EA----AKHLP---KEKVIYTGSPVREEVLK------GNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL 212 (352)
T ss_pred ch----hhhCC---CCCeEEECCcCCccccc------ccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc
Confidence 10 01111 13577888554432210 011111112222235679999999987544433 344444443
Q ss_pred hcCCeEEEEEeCCC-CCccCCCCcccccccccc----Cch------hHHhhcCCcee--EEeeCcceeccccc-----cc
Q 039408 318 RVGFRFLWSIREPS-KSKIYLPGEYTNLKVKEM----LPE------GFLNRTAGVGL--SLWYGVPIATWPLY-----AE 379 (456)
Q Consensus 318 ~~~~~~vw~~~~~~-~~~~~~~~~~~n~~~~~~----lP~------~f~~~~g~~G~--al~~GVP~v~~P~~-----~D 379 (456)
. +..++|..++.. ... +.. ..+..+..+ ++. -+++|.|+..+ ++++|+|+|.+|+. .|
T Consensus 213 ~-~~~vv~~~G~~~~~~~--~~~-~~~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~ 288 (352)
T PRK12446 213 L-KYQIVHLCGKGNLDDS--LQN-KEGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGD 288 (352)
T ss_pred c-CcEEEEEeCCchHHHH--Hhh-cCCcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCch
Confidence 2 478888887651 100 000 012111122 221 13445444443 99999999999985 48
Q ss_pred cchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh-HHHHHHHHH
Q 039408 380 QQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD-EVRKKVKEM 436 (456)
Q Consensus 380 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~r~~A~~l 436 (456)
|..||+.+++. |+|..+.. ..++.+.|.++|++++. |+ .|+++++++
T Consensus 289 Q~~Na~~l~~~-g~~~~l~~--------~~~~~~~l~~~l~~ll~-~~~~~~~~~~~~ 336 (352)
T PRK12446 289 QILNAESFERQ-GYASVLYE--------EDVTVNSLIKHVEELSH-NNEKYKTALKKY 336 (352)
T ss_pred HHHHHHHHHHC-CCEEEcch--------hcCCHHHHHHHHHHHHc-CHHHHHHHHHHc
Confidence 99999999997 99999874 46899999999999997 64 666665553
No 29
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.51 E-value=1.6e-12 Score=126.48 Aligned_cols=111 Identities=21% Similarity=0.305 Sum_probs=78.0
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHHHhcC-CeEEEEEeCCCCCccCCCCccccccccccCchhH----------Hhhc
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGLQRVG-FRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEGF----------LNRT 358 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~-~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~f----------~~~~ 358 (456)
+++.|+|+||..... .++++++..+ ..|++. +.... ....+|+.+..+...+| +++
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~-----~~~~~ni~~~~~~~~~~~~~m~~ad~vIs~- 257 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA-----DPRPGNIHVRPFSTPDFAELMAAADLVISK- 257 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc-----cccCCCEEEeecChHHHHHHHHhCCEEEEC-
Confidence 346799999987433 5566676665 566655 43310 11246776555442332 223
Q ss_pred CCcee---EEeeCcceecccc--ccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHh
Q 039408 359 AGVGL---SLWYGVPIATWPL--YAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRL 422 (456)
Q Consensus 359 g~~G~---al~~GVP~v~~P~--~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~v 422 (456)
+|.++ ++++|+|+|++|. ..+|..||+.+.+. |+|+.+.. ..++++.|+++|+++
T Consensus 258 ~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~-G~~~~~~~--------~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 258 GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEEL-GLGIVLSQ--------EDLTPERLAEFLERL 317 (318)
T ss_pred CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEccc--------ccCCHHHHHHHHhcC
Confidence 33343 9999999999999 78999999999997 99999975 479999999999864
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.43 E-value=2.5e-12 Score=125.28 Aligned_cols=115 Identities=15% Similarity=0.189 Sum_probs=73.5
Q ss_pred CeEEEEeccCCcCCCHHHHHHHHHHHHhcCC-eEEEEEeCCCCCccCCCCccccccccccCchhHHhh---------cCC
Q 039408 291 SSVVFLCFGSMGSFVGPQLREIAIGLQRVGF-RFLWSIREPSKSKIYLPGEYTNLKVKEMLPEGFLNR---------TAG 360 (456)
Q Consensus 291 ~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~-~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~f~~~---------~g~ 360 (456)
++.|+|.+||.. .+.++++|.+.+. .|++ ...... ....++|+.+..|.|+++..+ .+|
T Consensus 188 ~~~iLv~~g~~~------~~~l~~~l~~~~~~~~i~--~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~ad~vI~~~G 256 (321)
T TIGR00661 188 EDYILVYIGFEY------RYKILELLGKIANVKFVC--YSYEVA---KNSYNENVEIRRITTDNFKELIKNAELVITHGG 256 (321)
T ss_pred CCcEEEECCcCC------HHHHHHHHHhCCCeEEEE--eCCCCC---ccccCCCEEEEECChHHHHHHHHhCCEEEECCC
Confidence 456777788843 2345666766543 4442 222110 112346777777777543332 133
Q ss_pred cee---EEeeCcceecccccc--ccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHH
Q 039408 361 VGL---SLWYGVPIATWPLYA--EQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEV 429 (456)
Q Consensus 361 ~G~---al~~GVP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 429 (456)
.++ ++++|+|+|++|..+ ||..||+.+++. |+|+.++.. .+ ++.+++.+++. ++.|
T Consensus 257 ~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~--------~~---~~~~~~~~~~~-~~~~ 317 (321)
T TIGR00661 257 FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYK--------EL---RLLEAILDIRN-MKRY 317 (321)
T ss_pred hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChh--------hH---HHHHHHHhccc-cccc
Confidence 333 999999999999865 899999999998 999988842 33 55556666776 6554
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.35 E-value=4.3e-11 Score=116.72 Aligned_cols=312 Identities=19% Similarity=0.176 Sum_probs=164.0
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCCCC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPDQY 84 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 84 (456)
.|++...++-||+.|-++|+++|.++|++ +|.++.+.. ..+... ....++.+..++........
T Consensus 2 ~ivl~~gGTGGHv~pAlAl~~~l~~~g~~-~v~~~~~~~--------~~e~~l-----~~~~~~~~~~I~~~~~~~~~-- 65 (357)
T COG0707 2 KIVLTAGGTGGHVFPALALAEELAKRGWE-QVIVLGTGD--------GLEAFL-----VKQYGIEFELIPSGGLRRKG-- 65 (357)
T ss_pred eEEEEeCCCccchhHHHHHHHHHHhhCcc-EEEEecccc--------cceeee-----ccccCceEEEEecccccccC--
Confidence 48899999999999999999999999975 587875541 122111 11236777777644311111
Q ss_pred CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCc--cHHHHHHHhCCCeEEEecccHHHHHHHhhc
Q 039408 85 KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCT--SMTDVANQLGIPCYLYFASPASFLGFMLHF 162 (456)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 162 (456)
... .+...+.... .+.+.. .++++ .+||+||.-.-+. .+..+|..+|||.+.+-.-
T Consensus 66 -~~~-~~~~~~~~~~-~~~~a~-~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn----------- 123 (357)
T COG0707 66 -SLK-LLKAPFKLLK-GVLQAR-KILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQN----------- 123 (357)
T ss_pred -cHH-HHHHHHHHHH-HHHHHH-HHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecC-----------
Confidence 111 1222222221 222222 23332 5999999854333 3456788999998875211
Q ss_pred ccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEecccccccH
Q 039408 163 PNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTFQELEP 242 (456)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~ 242 (456)
..||+... +...+ ++ .+..++.+.+.
T Consensus 124 ----------------------------~~~G~ank-----~~~~~--------------------a~-~V~~~f~~~~~ 149 (357)
T COG0707 124 ----------------------------AVPGLANK-----ILSKF--------------------AK-KVASAFPKLEA 149 (357)
T ss_pred ----------------------------CCcchhHH-----HhHHh--------------------hc-eeeeccccccc
Confidence 11222100 00000 01 11222221110
Q ss_pred HHHHHHHcCCCCCeEEec-ccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHH-HHHHHHHHHhcC
Q 039408 243 YAIESISVNGMPPVYPIG-PVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQ-LREIAIGLQRVG 320 (456)
Q Consensus 243 ~~~~~~~~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~-~~~l~~al~~~~ 320 (456)
.. ...+++.+| |+...-. ..+..-....... ++++|.|.=||+....-.+ +.++...|.+ +
T Consensus 150 ----~~---~~~~~~~tG~Pvr~~~~--------~~~~~~~~~~~~~-~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~ 212 (357)
T COG0707 150 ----GV---KPENVVVTGIPVRPEFE--------ELPAAEVRKDGRL-DKKTILVTGGSQGAKALNDLVPEALAKLAN-R 212 (357)
T ss_pred ----cC---CCCceEEecCcccHHhh--------ccchhhhhhhccC-CCcEEEEECCcchhHHHHHHHHHHHHHhhh-C
Confidence 00 112466677 3332211 1011111111111 5678999989985433222 3444444444 4
Q ss_pred CeEEEEEeCCC-CCccCCCCcccc-ccccccCc---------hhHHhhcCCcee--EEeeCcceeccccc----cccchh
Q 039408 321 FRFLWSIREPS-KSKIYLPGEYTN-LKVKEMLP---------EGFLNRTAGVGL--SLWYGVPIATWPLY----AEQQMN 383 (456)
Q Consensus 321 ~~~vw~~~~~~-~~~~~~~~~~~n-~~~~~~lP---------~~f~~~~g~~G~--al~~GVP~v~~P~~----~DQ~~n 383 (456)
..+++..+++. .... ......+ +.+..++. +..++|.|+.-+ .+++|+|+|.+|.- .||..|
T Consensus 213 ~~v~~~~G~~~~~~~~-~~~~~~~~~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~N 291 (357)
T COG0707 213 IQVIHQTGKNDLEELK-SAYNELGVVRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYN 291 (357)
T ss_pred eEEEEEcCcchHHHHH-HHHhhcCcEEEeeHHhhHHHHHHhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHH
Confidence 56666666541 1000 0000011 21122211 113344333333 99999999999943 389999
Q ss_pred HHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh----HHHHHHHHH
Q 039408 384 AFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD----EVRKKVKEM 436 (456)
Q Consensus 384 a~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~----~~r~~A~~l 436 (456)
|+.+++. |.|..+.. ..+|.+++.+.|.+++. ++ .|+++|+++
T Consensus 292 A~~l~~~-gaa~~i~~--------~~lt~~~l~~~i~~l~~-~~~~l~~m~~~a~~~ 338 (357)
T COG0707 292 AKFLEKA-GAALVIRQ--------SELTPEKLAELILRLLS-NPEKLKAMAENAKKL 338 (357)
T ss_pred HHHHHhC-CCEEEecc--------ccCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhc
Confidence 9999998 99999984 46899999999999998 52 444444443
No 32
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.25 E-value=3.3e-12 Score=108.50 Aligned_cols=124 Identities=18% Similarity=0.218 Sum_probs=76.8
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCC-CCCCCCCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSV-DPPSPDQY 84 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~ 84 (456)
|+|++.|+.||++|+++||++|.+|||+ |++++++ .+.+.+. ..+++|++++.. ..+...
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~--V~~~~~~--------~~~~~v~-------~~Gl~~~~~~~~~~~~~~~-- 61 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHE--VRLATPP--------DFRERVE-------AAGLEFVPIPGDSRLPRSL-- 61 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-E--EEEEETG--------GGHHHHH-------HTT-EEEESSSCGGGGHHH--
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCe--EEEeecc--------cceeccc-------ccCceEEEecCCcCcCccc--
Confidence 7899999999999999999999999998 9999976 3444443 457999998755 110000
Q ss_pred CChHHHHHHHH------HHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEeccc
Q 039408 85 KSTLGYLSLFI------EKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASP 152 (456)
Q Consensus 85 ~~~~~~~~~~~------~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~ 152 (456)
.....+..+. ......+.+...+.+. ..+....+|+++.+.....+..+||++|||++.....+
T Consensus 62 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 62 -EPLANLRRLARLIRGLEEAMRILARFRPDLVV---AAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp -HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCC---HCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSG
T ss_pred -chhhhhhhHHHHhhhhhHHHHHhhccCcchhh---hccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCC
Confidence 0111111111 1111122222111111 11123467888899988889999999999999986655
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.08 E-value=2.6e-08 Score=98.14 Aligned_cols=60 Identities=32% Similarity=0.311 Sum_probs=50.1
Q ss_pred EEeeCcceecccc----ccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHH
Q 039408 364 SLWYGVPIATWPL----YAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKV 433 (456)
Q Consensus 364 al~~GVP~v~~P~----~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A 433 (456)
|+++|+|+|+.|. ..+|..|+..+.+. |+|+.+.. +..+.+++.++|++++. +++.+++.
T Consensus 268 am~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~--------~~~~~~~l~~~i~~ll~-~~~~~~~~ 331 (350)
T cd03785 268 LAALGLPAILIPLPYAADDHQTANARALVKA-GAAVLIPQ--------EELTPERLAAALLELLS-DPERLKAM 331 (350)
T ss_pred HHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-CCEEEEec--------CCCCHHHHHHHHHHHhc-CHHHHHHH
Confidence 9999999999986 45788999999997 99999884 24689999999999997 76555443
No 34
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.05 E-value=1.9e-08 Score=99.58 Aligned_cols=64 Identities=27% Similarity=0.228 Sum_probs=54.1
Q ss_pred EEeeCcceecccc----ccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPL----YAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMR 437 (456)
Q Consensus 364 al~~GVP~v~~P~----~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~ 437 (456)
|+++|+|+|+.|. .++|..|+..+.+. |.|+.++. +.++.+.++++|++++. |++++++..+-+
T Consensus 268 a~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~--------~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~ 335 (357)
T PRK00726 268 LAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQ--------SDLTPEKLAEKLLELLS-DPERLEAMAEAA 335 (357)
T ss_pred HHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEc--------ccCCHHHHHHHHHHHHc-CHHHHHHHHHHH
Confidence 9999999999997 46899999999998 99999985 35789999999999998 877775554443
No 35
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.95 E-value=5.7e-08 Score=96.96 Aligned_cols=79 Identities=14% Similarity=0.166 Sum_probs=68.4
Q ss_pred EEeeCcceecc----cccc---------ccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh---
Q 039408 364 SLWYGVPIATW----PLYA---------EQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD--- 427 (456)
Q Consensus 364 al~~GVP~v~~----P~~~---------DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~--- 427 (456)
++.+|+|+|+. |+.. +|..|+..++.. ++..++.- +.+|++.|.+.+.++|. |+
T Consensus 282 a~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~q--------~~~~~~~l~~~~~~ll~-~~~~~ 351 (385)
T TIGR00215 282 AALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELLQ--------EECTPHPLAIALLLLLE-NGLKA 351 (385)
T ss_pred HHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhcC--------CCCCHHHHHHHHHHHhc-CCccc
Confidence 99999999999 7543 288899999998 99888873 46999999999999998 88
Q ss_pred -HHHHHHHHHHHHHHHhhccCCCchh
Q 039408 428 -EVRKKVKEMREKSRTAVMEEGSSNK 452 (456)
Q Consensus 428 -~~r~~A~~l~~~~~~a~~~gGss~~ 452 (456)
+++++.++--+++++.++++|+|.+
T Consensus 352 ~~~~~~~~~~~~~~~~~l~~~~~~~~ 377 (385)
T TIGR00215 352 YKEMHRERQFFEELRQRIYCNADSER 377 (385)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 8998888888888888888888765
No 36
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.79 E-value=1.9e-06 Score=84.73 Aligned_cols=60 Identities=23% Similarity=0.133 Sum_probs=49.4
Q ss_pred EEeeCcceeccccc---cccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHH
Q 039408 364 SLWYGVPIATWPLY---AEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKV 433 (456)
Q Consensus 364 al~~GVP~v~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A 433 (456)
|+++|+|+|+.|.- .+|..|+..+.+. |.|..++. +..+.++++++|++++. |++++++.
T Consensus 266 a~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~--------~~~~~~~l~~~i~~ll~-~~~~~~~~ 328 (348)
T TIGR01133 266 LAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQ--------KELLPEKLLEALLKLLL-DPANLEAM 328 (348)
T ss_pred HHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEec--------ccCCHHHHHHHHHHHHc-CHHHHHHH
Confidence 99999999999863 4788899999987 99998764 34689999999999997 87665433
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.63 E-value=3.1e-06 Score=84.57 Aligned_cols=127 Identities=21% Similarity=0.333 Sum_probs=75.8
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHHHhc-CCeEEEEEeCCC--CCcc-CC-CCccccccccccCch--h-------HH
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGLQRV-GFRFLWSIREPS--KSKI-YL-PGEYTNLKVKEMLPE--G-------FL 355 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~-~~~~vw~~~~~~--~~~~-~~-~~~~~n~~~~~~lP~--~-------f~ 355 (456)
+++++++.-|+.... ..+..+++++.+. +.+++++.+.+. .... .+ ....+|+++.+++++ . ++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v 278 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMI 278 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEE
Confidence 345666666776421 2345666666543 456666655321 0000 00 111245655555542 1 22
Q ss_pred hhcCCcee--EEeeCcceecc-ccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHH
Q 039408 356 NRTAGVGL--SLWYGVPIATW-PLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKK 432 (456)
Q Consensus 356 ~~~g~~G~--al~~GVP~v~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~ 432 (456)
++.++..+ |+++|+|+|+. |..+.|..|+..+.+. |+|+... +.++++++|.+++. |++.+++
T Consensus 279 ~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~------------~~~~l~~~i~~ll~-~~~~~~~ 344 (380)
T PRK13609 279 TKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIR------------DDEEVFAKTEALLQ-DDMKLLQ 344 (380)
T ss_pred eCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEEC------------CHHHHHHHHHHHHC-CHHHHHH
Confidence 32222222 99999999985 6777788999988886 8887533 56899999999998 7655433
No 38
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.59 E-value=4.5e-06 Score=83.30 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=29.1
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEE
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVL 39 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~ 39 (456)
+|+++.-+..||+.|-+ ++++|.+++|++++.++
T Consensus 3 ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~ 36 (380)
T PRK00025 3 RIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGV 36 (380)
T ss_pred eEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEE
Confidence 59999999999999999 99999999988444443
No 39
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.08 E-value=9.2e-05 Score=70.52 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=53.5
Q ss_pred eEEEEeccCCcCCCHHHHHHHHHHHHhc--CCeEEEEEeCCCCCc---cCCCCccccccccccCch--h-------HHhh
Q 039408 292 SVVFLCFGSMGSFVGPQLREIAIGLQRV--GFRFLWSIREPSKSK---IYLPGEYTNLKVKEMLPE--G-------FLNR 357 (456)
Q Consensus 292 ~vVyvsfGS~~~~~~~~~~~l~~al~~~--~~~~vw~~~~~~~~~---~~~~~~~~n~~~~~~lP~--~-------f~~~ 357 (456)
+.|+|+||...... ....++++|... +.++.++++...+.. ..+.....|+.+..+.++ . ++++
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl~Is~ 248 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEADLAIGA 248 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCEEEEC
Confidence 46899999654322 334566666653 456777776542110 000111235544444432 1 2232
Q ss_pred cCCcee---EEeeCcceeccccccccchhHHH
Q 039408 358 TAGVGL---SLWYGVPIATWPLYAEQQMNAFE 386 (456)
Q Consensus 358 ~g~~G~---al~~GVP~v~~P~~~DQ~~na~~ 386 (456)
+| ++ +++.|+|+|++|...+|..||+.
T Consensus 249 -~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 249 -AG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred -Cc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 22 33 99999999999999999999975
No 40
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.08 E-value=0.0043 Score=60.58 Aligned_cols=55 Identities=18% Similarity=0.176 Sum_probs=40.5
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVK 434 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~ 434 (456)
|+++|+|+|+.+.. .+...+.+. +.|..... -+.++++++|.+++. +++.+++..
T Consensus 286 a~a~g~PvI~~~~~----~~~~~i~~~-~~g~~~~~----------~~~~~l~~~i~~l~~-~~~~~~~~~ 340 (364)
T cd03814 286 AMASGLPVVAPDAG----GPADIVTDG-ENGLLVEP----------GDAEAFAAALAALLA-DPELRRRMA 340 (364)
T ss_pred HHHcCCCEEEcCCC----CchhhhcCC-cceEEcCC----------CCHHHHHHHHHHHHc-CHHHHHHHH
Confidence 99999999987755 355666665 88877662 467889999999998 765544333
No 41
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=97.96 E-value=2.3e-07 Score=81.32 Aligned_cols=126 Identities=22% Similarity=0.259 Sum_probs=74.0
Q ss_pred EEEEeccCCcCCCHHH-HHHHHHHHHh--cCCeEEEEEeCCCCCcc--CCCCccccccccccCch--h-------HHhhc
Q 039408 293 VVFLCFGSMGSFVGPQ-LREIAIGLQR--VGFRFLWSIREPSKSKI--YLPGEYTNLKVKEMLPE--G-------FLNRT 358 (456)
Q Consensus 293 vVyvsfGS~~~~~~~~-~~~l~~al~~--~~~~~vw~~~~~~~~~~--~~~~~~~n~~~~~~lP~--~-------f~~~~ 358 (456)
+|+|+.||.....-.. +..+...+.. ....+++..+....... ...+...|+.+..+.++ . .++|
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvIs~- 79 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELMAAADLVISH- 79 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEEeC-
Confidence 4899999864221111 2222333322 14677887776511000 00111135555555552 1 2334
Q ss_pred CCcee---EEeeCcceecccccc----ccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHH
Q 039408 359 AGVGL---SLWYGVPIATWPLYA----EQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEV 429 (456)
Q Consensus 359 g~~G~---al~~GVP~v~~P~~~----DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 429 (456)
+|.|+ ++++|+|+|++|.-. +|..|+..+++. |+|..+.. ...+.+.|.++|++++. ++.+
T Consensus 80 aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~--------~~~~~~~L~~~i~~l~~-~~~~ 147 (167)
T PF04101_consen 80 AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDE--------SELNPEELAEAIEELLS-DPEK 147 (167)
T ss_dssp S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSEC--------CC-SCCCHHHHHHCHCC-CHH-
T ss_pred CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCc--------ccCCHHHHHHHHHHHHc-CcHH
Confidence 44444 999999999999998 999999999998 99998884 35679999999999998 6543
No 42
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=97.89 E-value=0.0064 Score=60.98 Aligned_cols=74 Identities=18% Similarity=0.178 Sum_probs=49.2
Q ss_pred EEeeCcceeccccccccchhHHHHHHh---hcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKE---LRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKS 440 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~---~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~ 440 (456)
+...|+|+|.+|.-.-|. |+...++. .|.++.+. ..+.+.+.+++.+++. |++.+++.. +..
T Consensus 311 ~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~----------~~~~~~l~~~l~~ll~-d~~~~~~~~---~~~ 375 (396)
T TIGR03492 311 AVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLA----------SKNPEQAAQVVRQLLA-DPELLERCR---RNG 375 (396)
T ss_pred HHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecC----------CCCHHHHHHHHHHHHc-CHHHHHHHH---HHH
Confidence 888999999999765565 98766652 15555554 2445999999999998 776554443 233
Q ss_pred HHhhccCCCchh
Q 039408 441 RTAVMEEGSSNK 452 (456)
Q Consensus 441 ~~a~~~gGss~~ 452 (456)
++.+++++++.+
T Consensus 376 ~~~lg~~~a~~~ 387 (396)
T TIGR03492 376 QERMGPPGASAR 387 (396)
T ss_pred HHhcCCCCHHHH
Confidence 334455565543
No 43
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.87 E-value=0.006 Score=60.79 Aligned_cols=50 Identities=18% Similarity=0.213 Sum_probs=37.9
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEV 429 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 429 (456)
|+++|+|+|+-... .+...+.+. +.|..++. -+.++++++|.+++. +++.
T Consensus 322 a~a~G~Pvi~s~~~----~~~e~i~~~-~~g~~~~~----------~~~~~l~~~i~~l~~-~~~~ 371 (398)
T cd03800 322 AMACGLPVVATAVG----GPRDIVVDG-VTGLLVDP----------RDPEALAAALRRLLT-DPAL 371 (398)
T ss_pred HHhcCCCEEECCCC----CHHHHccCC-CCeEEeCC----------CCHHHHHHHHHHHHh-CHHH
Confidence 99999999976543 455666665 78887763 368999999999997 6543
No 44
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.86 E-value=0.01 Score=57.76 Aligned_cols=49 Identities=24% Similarity=0.219 Sum_probs=37.5
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+.+. ..+...+.+. +.|..+.. -+.++++++|+++++ +++
T Consensus 283 a~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----------~d~~~l~~~i~~l~~-~~~ 331 (359)
T cd03823 283 ALAAGVPVIASDI----GGMAELVRDG-VNGLLFPP----------GDAEDLAAALERLID-DPD 331 (359)
T ss_pred HHHCCCCEEECCC----CCHHHHhcCC-CcEEEECC----------CCHHHHHHHHHHHHh-ChH
Confidence 9999999998654 4566666664 57877763 358999999999998 653
No 45
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.82 E-value=0.039 Score=55.36 Aligned_cols=50 Identities=8% Similarity=0.103 Sum_probs=37.7
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEV 429 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 429 (456)
|+++|+|+|+. |...+...+... ..|+.++. -+.++++++|.++++ +++.
T Consensus 320 AmA~G~PVIas----~~~g~~e~i~~~-~~G~lv~~----------~d~~~la~~i~~ll~-~~~~ 369 (396)
T cd03818 320 AMACGCLVVGS----DTAPVREVITDG-ENGLLVDF----------FDPDALAAAVIELLD-DPAR 369 (396)
T ss_pred HHHCCCCEEEc----CCCCchhhcccC-CceEEcCC----------CCHHHHHHHHHHHHh-CHHH
Confidence 99999999985 444566666654 56776663 478999999999998 7643
No 46
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.77 E-value=0.019 Score=59.04 Aligned_cols=51 Identities=16% Similarity=0.078 Sum_probs=37.2
Q ss_pred EEeeCcceeccccccccchhHHHHHH---hhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVK---ELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~---~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
|+++|+|+|+.... .....+.+ . +.|..++. -+.++++++|.++++ |++.+
T Consensus 351 AmA~G~PVI~s~~g----g~~eiv~~~~~~-~~G~lv~~----------~d~~~la~~i~~ll~-~~~~~ 404 (465)
T PLN02871 351 AMASGVPVVAARAG----GIPDIIPPDQEG-KTGFLYTP----------GDVDDCVEKLETLLA-DPELR 404 (465)
T ss_pred HHHcCCCEEEcCCC----CcHhhhhcCCCC-CceEEeCC----------CCHHHHHHHHHHHHh-CHHHH
Confidence 99999999987643 33444544 4 77877763 367899999999997 76443
No 47
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.70 E-value=0.011 Score=57.89 Aligned_cols=51 Identities=16% Similarity=0.125 Sum_probs=37.3
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
|+++|+|+|+.+..+.+. .+.+. +.|..++. -+.++++++|.+++. |++.+
T Consensus 319 a~~~G~pvi~~~~~~~~~----~~~~~-~~g~~~~~----------~~~~~l~~~i~~~~~-~~~~~ 369 (394)
T cd03794 319 YMAAGKPVLASVDGESAE----LVEEA-GAGLVVPP----------GDPEALAAAILELLD-DPEER 369 (394)
T ss_pred HHHCCCcEEEecCCCchh----hhccC-CcceEeCC----------CCHHHHHHHHHHHHh-ChHHH
Confidence 999999999988765443 33333 66766663 378999999999997 65433
No 48
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=97.68 E-value=0.012 Score=58.87 Aligned_cols=51 Identities=22% Similarity=0.197 Sum_probs=42.8
Q ss_pred EEeeCcceeccccccccc-hhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC-hH
Q 039408 364 SLWYGVPIATWPLYAEQQ-MNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD-DE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~-~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~ 428 (456)
|+++|+|+|+.+....|. .|+..+.+. |.|+.+. +.+++.++|++++. + ++
T Consensus 298 Ama~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~~------------~~~~la~~i~~ll~-~~~~ 350 (382)
T PLN02605 298 ALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFSE------------SPKEIARIVAEWFG-DKSD 350 (382)
T ss_pred HHHcCCCEEEecCCCccchhhHHHHHhC-CceeecC------------CHHHHHHHHHHHHc-CCHH
Confidence 999999999998777776 699989887 9997432 67899999999997 5 54
No 49
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.43 E-value=0.067 Score=54.23 Aligned_cols=55 Identities=20% Similarity=0.321 Sum_probs=44.4
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKK 432 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~ 432 (456)
|+++|+|+|+-|..+++......+.+. |.++... +.++++++|.++++ |++.+++
T Consensus 340 Ama~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~------------d~~~La~~l~~ll~-~~~~~~~ 394 (425)
T PRK05749 340 PAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVE------------DAEDLAKAVTYLLT-DPDARQA 394 (425)
T ss_pred HHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEEC------------CHHHHHHHHHHHhc-CHHHHHH
Confidence 999999999999988888888877665 7766533 67899999999998 7655433
No 50
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=97.35 E-value=0.046 Score=52.23 Aligned_cols=52 Identities=21% Similarity=0.214 Sum_probs=45.7
Q ss_pred EEeeCcceecccccc---ccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 364 SLWYGVPIATWPLYA---EQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 364 al~~GVP~v~~P~~~---DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
=|++|+|-+++|... +|-.-|.|+++. |.-=.+.. +.++++.++++|+..+.
T Consensus 310 ILs~~k~aLivPr~~p~eEQliRA~Rl~~L-GL~dvL~p--------e~lt~~~La~al~~~l~ 364 (400)
T COG4671 310 ILSFGKPALIVPRAAPREEQLIRAQRLEEL-GLVDVLLP--------ENLTPQNLADALKAALA 364 (400)
T ss_pred HHhCCCceEEeccCCCcHHHHHHHHHHHhc-CcceeeCc--------ccCChHHHHHHHHhccc
Confidence 899999999999764 899999999996 98777765 46899999999999887
No 51
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.25 E-value=0.18 Score=48.96 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=40.4
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH----HHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE----VRKKVKEMREK 439 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~----~r~~A~~l~~~ 439 (456)
|+++|+|+|+.. ....+..+.+. +.|..++.+ +. ++.++|.++++ +++ +++++++..+.
T Consensus 298 a~~~g~PvI~~~----~~~~~~~i~~~-~~g~~~~~~----------~~-~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 298 AMAAGLPVVAVD----APGLPDLVADG-ENGFLFPPG----------DE-ALAEALLRLLQ-DPELRRRLSKNAEESAEK 360 (374)
T ss_pred HHHcCCcEEEeC----CCChhhheecC-ceeEEeCCC----------CH-HHHHHHHHHHh-ChHHHHHHHHHHHHHHHH
Confidence 999999999865 34456666665 778777631 12 89999999997 653 55555544443
No 52
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.25 E-value=0.25 Score=49.49 Aligned_cols=52 Identities=15% Similarity=0.155 Sum_probs=37.9
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRK 431 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~ 431 (456)
|+++|+|+|+... ......+.+. +.|+.++. -+.++++++|.+++. +++.++
T Consensus 322 Ama~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----------~d~~~la~~i~~~l~-~~~~~~ 373 (405)
T TIGR03449 322 AQACGTPVVAARV----GGLPVAVADG-ETGLLVDG----------HDPADWADALARLLD-DPRTRI 373 (405)
T ss_pred HHHcCCCEEEecC----CCcHhhhccC-CceEECCC----------CCHHHHHHHHHHHHh-CHHHHH
Confidence 9999999998654 3445556554 67776663 478999999999997 754443
No 53
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.12 E-value=0.31 Score=54.08 Aligned_cols=51 Identities=12% Similarity=-0.003 Sum_probs=37.4
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
|+++|+|+|+....+ ....+... ..|+.++. -+.+.++++|.+++. ++..+
T Consensus 591 AMAcGlPVVASdvGG----~~EII~~g-~nGlLVdP----------~D~eaLA~AL~~LL~-Dpelr 641 (1050)
T TIGR02468 591 AAAHGLPMVATKNGG----PVDIHRVL-DNGLLVDP----------HDQQAIADALLKLVA-DKQLW 641 (1050)
T ss_pred HHHhCCCEEEeCCCC----cHHHhccC-CcEEEECC----------CCHHHHHHHHHHHhh-CHHHH
Confidence 999999999986543 33444443 56877763 478899999999998 76443
No 54
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.07 E-value=0.32 Score=46.85 Aligned_cols=35 Identities=14% Similarity=0.087 Sum_probs=30.6
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|++++....|+..-+..|+++|.++||+ |++++..
T Consensus 2 Il~i~~~~~g~~~~~~~l~~~L~~~g~~--v~~~~~~ 36 (359)
T cd03808 2 ILHIVTVDGGLYSFRLPLIKALRAAGYE--VHVVAPP 36 (359)
T ss_pred eeEEEecchhHHHHHHHHHHHHHhcCCe--eEEEecC
Confidence 6777777888999999999999999988 9998865
No 55
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.04 E-value=0.33 Score=46.72 Aligned_cols=51 Identities=18% Similarity=0.211 Sum_probs=38.6
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
|+++|+|+|+.+. ..+...+.+. +.|+..+. .+.+++.++|.+++. +++.+
T Consensus 295 a~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~~----------~~~~~l~~~i~~~~~-~~~~~ 345 (374)
T cd03801 295 AMAAGLPVVASDV----GGIPEVVEDG-ETGLLVPP----------GDPEALAEAILRLLD-DPELR 345 (374)
T ss_pred HHHcCCcEEEeCC----CChhHHhcCC-cceEEeCC----------CCHHHHHHHHHHHHc-ChHHH
Confidence 9999999998665 4566666655 77877763 468999999999997 65433
No 56
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.00 E-value=0.34 Score=48.16 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=35.1
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+.-. ......+.+. +.|.-.+ .+.++++++|.+++. +++
T Consensus 319 Ama~G~PvI~s~~----~~~~e~i~~~-~~g~~~~-----------~~~~~~a~~i~~l~~-~~~ 366 (392)
T cd03805 319 AMYAGKPVIACNS----GGPLETVVDG-ETGFLCE-----------PTPEEFAEAMLKLAN-DPD 366 (392)
T ss_pred HHHcCCCEEEECC----CCcHHHhccC-CceEEeC-----------CCHHHHHHHHHHHHh-ChH
Confidence 9999999998643 3344556554 5676554 268899999999997 653
No 57
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=96.97 E-value=0.0018 Score=64.94 Aligned_cols=123 Identities=11% Similarity=0.175 Sum_probs=73.0
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHH-Hh-cCCeEEEEEeCCCC--Ccc-CCCCccccccccccCch--h-------HH
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGL-QR-VGFRFLWSIREPSK--SKI-YLPGEYTNLKVKEMLPE--G-------FL 355 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al-~~-~~~~~vw~~~~~~~--~~~-~~~~~~~n~~~~~~lP~--~-------f~ 355 (456)
++++|.+..|++.. ...+..+++++ +. .+.+++++.+.+.. ... ...+..+++.+.++..+ . ++
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl~I 278 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQLMI 278 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHHHhhhEEE
Confidence 45677777788752 13344444443 22 23566666554311 000 00111234544444421 1 33
Q ss_pred hhcCCcee--EEeeCcceecc-ccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 356 NRTAGVGL--SLWYGVPIATW-PLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 356 ~~~g~~G~--al~~GVP~v~~-P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
++.|+..+ |+++|+|+|+. |.-+.|..|+..+.+. |+|+.+. +.+++.++|.+++. |++
T Consensus 279 ~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~------------~~~~l~~~i~~ll~-~~~ 340 (391)
T PRK13608 279 TKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD------------TPEEAIKIVASLTN-GNE 340 (391)
T ss_pred eCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC------------CHHHHHHHHHHHhc-CHH
Confidence 33332222 99999999998 7767778999999998 9997644 67889999999997 653
No 58
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=96.91 E-value=0.42 Score=45.74 Aligned_cols=57 Identities=21% Similarity=0.396 Sum_probs=39.9
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhc-ceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELR-LAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEM 436 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l 436 (456)
|+++|+|+|+.+..+.+ ..+... | .|..++. .+.++++++|.+++. |++.+++..+-
T Consensus 272 a~a~G~Pvi~~~~~~~~----~~~~~~-~~~g~~~~~----------~~~~~~~~~i~~ll~-~~~~~~~~~~~ 329 (348)
T cd03820 272 AMAFGLPVISFDCPTGP----SEIIED-GVNGLLVPN----------GDVEALAEALLRLME-DEELRKRMGAN 329 (348)
T ss_pred HHHcCCCEEEecCCCch----Hhhhcc-CcceEEeCC----------CCHHHHHHHHHHHHc-CHHHHHHHHHH
Confidence 99999999986554433 334444 5 7776662 468999999999998 77655444433
No 59
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.75 E-value=0.54 Score=49.04 Aligned_cols=82 Identities=17% Similarity=0.129 Sum_probs=49.1
Q ss_pred EEeeCcceeccc-cccccchhHHHHHHh--hcc-------eEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHH
Q 039408 364 SLWYGVPIATWP-LYAEQQMNAFELVKE--LRL-------AVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKV 433 (456)
Q Consensus 364 al~~GVP~v~~P-~~~DQ~~na~~v~~~--~G~-------G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A 433 (456)
+..+|+|||+.= ...=-+..++++.+. .=+ |-++-+.--.+ .+.+|++.|++++ ++|. |+.+|++.
T Consensus 503 aAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqg--Q~~~tpe~La~~l-~lL~-d~~~r~~~ 578 (608)
T PRK01021 503 TALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGG--KKDFQPEEVAAAL-DILK-TSQSKEKQ 578 (608)
T ss_pred HHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCC--cccCCHHHHHHHH-HHhc-CHHHHHHH
Confidence 888999999853 221223445666541 001 11111110000 1368999999997 7887 77788888
Q ss_pred HHHHHHHHHhhccCCC
Q 039408 434 KEMREKSRTAVMEEGS 449 (456)
Q Consensus 434 ~~l~~~~~~a~~~gGs 449 (456)
++--+++++.+++|-+
T Consensus 579 ~~~l~~lr~~Lg~~~~ 594 (608)
T PRK01021 579 KDACRDLYQAMNESAS 594 (608)
T ss_pred HHHHHHHHHHhcCCCC
Confidence 7777777877765544
No 60
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=96.49 E-value=0.18 Score=46.82 Aligned_cols=61 Identities=20% Similarity=0.239 Sum_probs=47.8
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKE 435 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~ 435 (456)
++.-|||-+++|+..-|---|...+.. |+-..+.. .++.+.+..-+.+++. |...|++--.
T Consensus 242 a~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~---------~l~~~~~~~~~~~i~~-d~~~rk~l~~ 302 (318)
T COG3980 242 ALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGY---------HLKDLAKDYEILQIQK-DYARRKNLSF 302 (318)
T ss_pred HHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccC---------CCchHHHHHHHHHhhh-CHHHhhhhhh
Confidence 999999999999999999999999986 88776653 2666666777777887 7666655433
No 61
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=96.29 E-value=0.0036 Score=48.97 Aligned_cols=67 Identities=18% Similarity=0.284 Sum_probs=49.7
Q ss_pred CChhhHHhhhccCCCCeEEEEeccCCcCC---CH--HHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccc
Q 039408 276 VHHESIMKWLDDQPPSSVVFLCFGSMGSF---VG--PQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNL 344 (456)
Q Consensus 276 ~~~~~~~~wLd~~~~~~vVyvsfGS~~~~---~~--~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~ 344 (456)
+.+..+..||...+.++.|.||+||.... .. ..+..++++++.++..+|..+...... .+...|+||
T Consensus 25 NG~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~--~lg~lP~nV 96 (97)
T PF06722_consen 25 NGPAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRA--ELGELPDNV 96 (97)
T ss_dssp -SSEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCG--GCCS-TTTE
T ss_pred CCCCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHH--hhCCCCCCC
Confidence 44566788999888899999999998643 22 468899999999999999999876321 134455665
No 62
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=96.29 E-value=1.2 Score=43.15 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=25.0
Q ss_pred CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 13 EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 13 ~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
..|+..-...|++.|.++||+ |++++..
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~--v~v~~~~ 40 (375)
T cd03821 13 YGGPVRVVLNLSKALAKLGHE--VTVATTD 40 (375)
T ss_pred cCCeehHHHHHHHHHHhcCCc--EEEEecC
Confidence 568999999999999999988 8888865
No 63
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=96.15 E-value=1.2 Score=44.14 Aligned_cols=86 Identities=23% Similarity=0.210 Sum_probs=56.7
Q ss_pred EEeeCcceeccc-cccccchhHHHHHHhhcceEEec-----ccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHH
Q 039408 364 SLWYGVPIATWP-LYAEQQMNAFELVKELRLAVEIR-----LDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMR 437 (456)
Q Consensus 364 al~~GVP~v~~P-~~~DQ~~na~~v~~~~G~G~~l~-----~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~ 437 (456)
+..+|+|||++= ...=-+..|+++++. .. +.+. +.--++-=.+.+|++.+.+++.++|. |++.++..++..
T Consensus 275 ~Al~g~P~Vv~Yk~~~lt~~iak~lvk~-~~-isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~-~~~~~~~~~~~~ 351 (373)
T PF02684_consen 275 AALLGVPMVVAYKVSPLTYFIAKRLVKV-KY-ISLPNIIAGREVVPELIQEDATPENIAAELLELLE-NPEKRKKQKELF 351 (373)
T ss_pred HHHhCCCEEEEEcCcHHHHHHHHHhhcC-CE-eechhhhcCCCcchhhhcccCCHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 888999999864 222334556666543 22 1111 00000000147899999999999998 887788888888
Q ss_pred HHHHHhhccCCCchh
Q 039408 438 EKSRTAVMEEGSSNK 452 (456)
Q Consensus 438 ~~~~~a~~~gGss~~ 452 (456)
+.+++..+.|.+|..
T Consensus 352 ~~~~~~~~~~~~~~~ 366 (373)
T PF02684_consen 352 REIRQLLGPGASSRA 366 (373)
T ss_pred HHHHHhhhhccCCHH
Confidence 888888888877754
No 64
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=96.12 E-value=1.4 Score=42.47 Aligned_cols=49 Identities=12% Similarity=0.101 Sum_probs=36.7
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+-+. ......+.+. +.|...+ .-+.+++.++|++++. ++.
T Consensus 298 a~~~G~pvI~~~~----~~~~~~~~~~-~~g~~~~----------~~~~~~l~~~i~~~~~-~~~ 346 (377)
T cd03798 298 AMACGLPVVATDV----GGIPEIITDG-ENGLLVP----------PGDPEALAEAILRLLA-DPW 346 (377)
T ss_pred HHhcCCCEEEecC----CChHHHhcCC-cceeEEC----------CCCHHHHHHHHHHHhc-CcH
Confidence 9999999998654 3455556654 6676665 3578999999999998 655
No 65
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=96.09 E-value=1.9 Score=43.81 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=37.4
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEV 429 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 429 (456)
|+++|+|+|+.-.. .+...+.+. ..|+.++. -+.++++++|.++++ |+..
T Consensus 360 Ama~G~PvV~s~~g----g~~eiv~~~-~~G~lv~~----------~d~~~la~~i~~ll~-~~~~ 409 (439)
T TIGR02472 360 AAACGLPIVATDDG----GPRDIIANC-RNGLLVDV----------LDLEAIASALEDALS-DSSQ 409 (439)
T ss_pred HHHhCCCEEEeCCC----CcHHHhcCC-CcEEEeCC----------CCHHHHHHHHHHHHh-CHHH
Confidence 99999999987653 455555554 56877763 478999999999998 7643
No 66
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=96.02 E-value=1.6 Score=42.29 Aligned_cols=47 Identities=19% Similarity=0.314 Sum_probs=35.4
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD 427 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 427 (456)
|+++|+|+|+-+..+ ...+... +.|..+.. -+.++++++|.++++ ++
T Consensus 289 a~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~~----------~d~~~~~~~l~~l~~-~~ 335 (366)
T cd03822 289 AIGFGKPVISTPVGH-----AEEVLDG-GTGLLVPP----------GDPAALAEAIRRLLA-DP 335 (366)
T ss_pred HHHcCCCEEecCCCC-----hheeeeC-CCcEEEcC----------CCHHHHHHHHHHHHc-Ch
Confidence 999999999977654 3334444 77776663 368999999999998 64
No 67
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=95.92 E-value=1.4 Score=41.97 Aligned_cols=35 Identities=17% Similarity=0.307 Sum_probs=27.9
Q ss_pred EEEEcCC--CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 6 VVLICTP--EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 6 il~~~~~--~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+++... ..|+-.-+..|++.|.+.||+ |++++..
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~--v~v~~~~ 38 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYD--VTLVVLR 38 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCce--EEEEEcC
Confidence 4444444 688889999999999999988 8888864
No 68
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.39 E-value=3 Score=40.84 Aligned_cols=50 Identities=16% Similarity=0.143 Sum_probs=36.9
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEV 429 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 429 (456)
|+++|+|+|+.. .......+.+. ..|..++. -+.++++++|.+++. ++..
T Consensus 290 Ama~g~PvI~s~----~~~~~e~i~~~-~~G~~~~~----------~~~~~l~~~i~~l~~-~~~~ 339 (371)
T cd04962 290 AMACGVPVVASN----AGGIPEVVKHG-ETGFLVDV----------GDVEAMAEYALSLLE-DDEL 339 (371)
T ss_pred HHHcCCCEEEeC----CCCchhhhcCC-CceEEcCC----------CCHHHHHHHHHHHHh-CHHH
Confidence 999999999854 44566666654 57766552 378999999999997 6543
No 69
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=95.05 E-value=3.7 Score=39.94 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=28.7
Q ss_pred EEEEEcCC-C-CcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTP-E-MGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~-~-~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+|+++... . .|+-.=...++++|.++||+ |++++..
T Consensus 2 kIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~--v~v~~~~ 39 (365)
T cd03825 2 KVLHLNTSDISGGAARAAYRLHRALQAAGVD--STMLVQE 39 (365)
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHHHhcCCc--eeEEEee
Confidence 36666544 3 68889999999999999998 8888754
No 70
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=94.88 E-value=4 Score=39.55 Aligned_cols=50 Identities=12% Similarity=0.016 Sum_probs=35.0
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+.-. ..+...+.+. +.|..++. -+.++++++|..++..+++
T Consensus 284 A~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~----------~~~~~l~~~i~~~~~~~~~ 333 (355)
T cd03819 284 AQAMGRPVIASDH----GGARETVRPG-ETGLLVPP----------GDAEALAQALDQILSLLPE 333 (355)
T ss_pred HHhcCCCEEEcCC----CCcHHHHhCC-CceEEeCC----------CCHHHHHHHHHHHHhhCHH
Confidence 9999999998653 3455556554 57877763 4889999999765542443
No 71
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=94.29 E-value=0.18 Score=51.62 Aligned_cols=106 Identities=25% Similarity=0.281 Sum_probs=67.3
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCcc-------CCCCccccccccccCchhHHhhcC---
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREPSKSKI-------YLPGEYTNLKVKEMLPEGFLNRTA--- 359 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~-------~~~~~~~n~~~~~~lP~~f~~~~g--- 359 (456)
+.-|||-+|--..-++|+.++..++.|+......+|.++.+-.+.. .+.-.|+.+.+....+ +.+|..
T Consensus 757 ~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~--k~eHvrr~~ 834 (966)
T KOG4626|consen 757 EDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAA--KEEHVRRGQ 834 (966)
T ss_pred CCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccc--hHHHHHhhh
Confidence 4579999999988999999999999999999999999997622110 0011122332222221 233322
Q ss_pred --------------Ccee-EEeeCcceecccccc-ccchhHHHHHHhhcceEEec
Q 039408 360 --------------GVGL-SLWYGVPIATWPLYA-EQQMNAFELVKELRLAVEIR 398 (456)
Q Consensus 360 --------------~~G~-al~~GVP~v~~P~~~-DQ~~na~~v~~~~G~G~~l~ 398 (456)
..|+ .|++|||||.+|.-. -.-.-+..+... |+|--+.
T Consensus 835 LaDv~LDTplcnGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~-Gl~hlia 888 (966)
T KOG4626|consen 835 LADVCLDTPLCNGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTAL-GLGHLIA 888 (966)
T ss_pred hhhhcccCcCcCCcccchhhhccCCceeecccHHHHHHHHHHHHHHc-ccHHHHh
Confidence 2223 999999999999643 222333445554 8887444
No 72
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=93.97 E-value=0.92 Score=44.84 Aligned_cols=66 Identities=17% Similarity=0.210 Sum_probs=53.7
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh----HHHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD----EVRKKVKEMREK 439 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~----~~r~~A~~l~~~ 439 (456)
++++|+|+|.=|+..-|.+-++++... |.|+.++ +.+.|.+++..++. |+ .|.+++.++-+.
T Consensus 338 pa~~~~pvi~Gp~~~Nf~ei~~~l~~~-ga~~~v~------------~~~~l~~~v~~l~~-~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 338 PAAFGTPVIFGPYTFNFSDIAERLLQA-GAGLQVE------------DADLLAKAVELLLA-DEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred HHHcCCCEEeCCccccHHHHHHHHHhc-CCeEEEC------------CHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 9999888 37889999998887 54 444555555554
Q ss_pred HHHh
Q 039408 440 SRTA 443 (456)
Q Consensus 440 ~~~a 443 (456)
.+.+
T Consensus 404 ~~ga 407 (419)
T COG1519 404 NRGA 407 (419)
T ss_pred hhHH
Confidence 4443
No 73
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=93.46 E-value=1.4 Score=43.03 Aligned_cols=107 Identities=15% Similarity=0.120 Sum_probs=62.7
Q ss_pred CCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCCCCCChHHH
Q 039408 11 TPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPDQYKSTLGY 90 (456)
Q Consensus 11 ~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 90 (456)
....-|+.-|-.+.++|.++||+ |.+.+-+.. ......+. -++++..+.... .+....
T Consensus 7 i~~p~hvhfFk~~I~eL~~~Ghe--V~it~R~~~---~~~~LL~~----------yg~~y~~iG~~g-------~~~~~K 64 (335)
T PF04007_consen 7 ITHPAHVHFFKNIIRELEKRGHE--VLITARDKD---ETEELLDL----------YGIDYIVIGKHG-------DSLYGK 64 (335)
T ss_pred CCCchHHHHHHHHHHHHHhCCCE--EEEEEeccc---hHHHHHHH----------cCCCeEEEcCCC-------CCHHHH
Confidence 34445999999999999999998 655543321 11123332 357777765322 122222
Q ss_pred HHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEeccc
Q 039408 91 LSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASP 152 (456)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~ 152 (456)
+...... ..++++ ++.+ .+||++|+- ....+..+|.-+|+|+|.|.-+.
T Consensus 65 l~~~~~R----~~~l~~-~~~~-------~~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e 113 (335)
T PF04007_consen 65 LLESIER----QYKLLK-LIKK-------FKPDVAISF-GSPEAARVAFGLGIPSIVFNDTE 113 (335)
T ss_pred HHHHHHH----HHHHHH-HHHh-------hCCCEEEec-CcHHHHHHHHHhCCCeEEEecCc
Confidence 2222221 222223 2222 489999953 34556679999999999986554
No 74
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=93.09 E-value=0.31 Score=49.39 Aligned_cols=41 Identities=29% Similarity=0.299 Sum_probs=32.6
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEeCC
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREP 330 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~~~ 330 (456)
+..|+|.||.+..-.+++.+.-.++.|++.+.-.+|..+.+
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~ 323 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFP 323 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETS
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCC
Confidence 45799999999999999999999999999998889988754
No 75
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=92.70 E-value=1.9 Score=43.53 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=31.6
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+.|+++++..-.|+-.=+..+|+.|+++||+ |++++..
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~--V~ii~~~ 40 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWK--VDLVGYL 40 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhcCce--EEEEEec
Confidence 45578888887777766668899999999988 9998864
No 76
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=91.77 E-value=0.19 Score=49.33 Aligned_cols=119 Identities=10% Similarity=0.160 Sum_probs=70.9
Q ss_pred EeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh----HHhh--------cCCcee
Q 039408 296 LCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG----FLNR--------TAGVGL 363 (456)
Q Consensus 296 vsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~----f~~~--------~g~~G~ 363 (456)
+..|.+. ....+..++++++..+.+++++-......... ....+|+.+.+++|+. +... ..+.|+
T Consensus 199 l~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~~~~~l~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~ 275 (351)
T cd03804 199 LSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGPELDRLR-AKAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGI 275 (351)
T ss_pred EEEEcCc--cccChHHHHHHHHHCCCcEEEEECChhHHHHH-hhcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCc
Confidence 3446654 22336667788887777766543332111000 0234678777888753 1111 133455
Q ss_pred ----EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh-HHHHHH
Q 039408 364 ----SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD-EVRKKV 433 (456)
Q Consensus 364 ----al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~r~~A 433 (456)
|+++|+|+|+....+ ....+.+. +.|+.++. -+.++++++|.+++. ++ ..++++
T Consensus 276 ~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~----------~~~~~la~~i~~l~~-~~~~~~~~~ 334 (351)
T cd03804 276 VPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEE----------QTVESLAAAVERFEK-NEDFDPQAI 334 (351)
T ss_pred hHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCC----------CCHHHHHHHHHHHHh-CcccCHHHH
Confidence 999999999976533 44445554 67887763 378889999999997 65 333333
No 77
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=91.52 E-value=0.27 Score=48.02 Aligned_cols=62 Identities=23% Similarity=0.343 Sum_probs=48.4
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD-DEVRKKVKEMREKSRT 442 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~r~~A~~l~~~~~~ 442 (456)
.+++|+|+|++. +...+..|.+. ++|+.++ +.+++.+++.++..++ .+|++||+++++.++.
T Consensus 256 ymA~G~PVI~~~----~~~~~~~V~~~-~~G~~v~------------~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 256 YLAAGLPVIVWS----KAAIADFIVEN-GLGFVVD------------SLEELPEIIDNITEEEYQEMVENVKKISKLLRN 318 (333)
T ss_pred HHHCCCCEEECC----CccHHHHHHhC-CceEEeC------------CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc
Confidence 499999999864 56788888887 9999877 3467899998854311 3789999999999874
No 78
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=91.45 E-value=0.81 Score=44.46 Aligned_cols=119 Identities=14% Similarity=0.194 Sum_probs=68.4
Q ss_pred EEEEeccCCcCCCHHHHHHHHHHHHhcC-CeEEEEEeCCCCCcc-C---CCCccccccccccCchh----HHh-------
Q 039408 293 VVFLCFGSMGSFVGPQLREIAIGLQRVG-FRFLWSIREPSKSKI-Y---LPGEYTNLKVKEMLPEG----FLN------- 356 (456)
Q Consensus 293 vVyvsfGS~~~~~~~~~~~l~~al~~~~-~~~vw~~~~~~~~~~-~---~~~~~~n~~~~~~lP~~----f~~------- 356 (456)
.+.+..|++. ....+..+++++++.. .++++.-........ . ......|+.+.+++|+. +..
T Consensus 192 ~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ 269 (357)
T cd03795 192 PFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVF 269 (357)
T ss_pred cEEEEecccc--cccCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEe
Confidence 3555667764 2233556777777766 444444322211000 0 01234577777788753 111
Q ss_pred ----hcCCcee----EEeeCcceeccccccccchhHHHHHH-hhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh
Q 039408 357 ----RTAGVGL----SLWYGVPIATWPLYAEQQMNAFELVK-ELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD 427 (456)
Q Consensus 357 ----~~g~~G~----al~~GVP~v~~P~~~DQ~~na~~v~~-~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 427 (456)
+..+.|+ |+++|+|+|+....+.. ..+.. . +.|...+. -+.++++++|.+++. ++
T Consensus 270 ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~-~~g~~~~~----------~d~~~~~~~i~~l~~-~~ 333 (357)
T cd03795 270 PSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHG-VTGLVVPP----------GDPAALAEAIRRLLE-DP 333 (357)
T ss_pred CCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCC-CceEEeCC----------CCHHHHHHHHHHHHH-CH
Confidence 1123344 99999999986554444 33433 4 67776662 478999999999998 76
Q ss_pred HH
Q 039408 428 EV 429 (456)
Q Consensus 428 ~~ 429 (456)
+.
T Consensus 334 ~~ 335 (357)
T cd03795 334 EL 335 (357)
T ss_pred HH
Confidence 43
No 79
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=89.95 E-value=1.6 Score=43.96 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=38.5
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
|+++|+|+|+-. .......+.+. +.|+.+.. .-+.++++++|.+++. |++.+
T Consensus 330 Ama~G~PVIas~----vgg~~e~i~~~-~~G~l~~~---------~~~~~~la~~I~~ll~-~~~~~ 381 (407)
T cd04946 330 AMSFGIPVIATN----VGGTPEIVDNG-GNGLLLSK---------DPTPNELVSSLSKFID-NEEEY 381 (407)
T ss_pred HHHcCCCEEeCC----CCCcHHHhcCC-CcEEEeCC---------CCCHHHHHHHHHHHHh-CHHHH
Confidence 999999999854 34456666653 48887763 3478999999999997 76443
No 80
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=89.74 E-value=0.73 Score=38.64 Aligned_cols=42 Identities=26% Similarity=0.089 Sum_probs=38.2
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVP 44 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~ 44 (456)
||+.+|++.+.++-+|-.-..-++..|.++| ++|+++....+
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G--~eVi~LG~~vp 42 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAG--FEVINLGVMTS 42 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCC--CEEEECCCCCC
Confidence 8999999999999999999999999999999 55999987644
No 81
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=88.95 E-value=0.77 Score=38.57 Aligned_cols=21 Identities=29% Similarity=0.352 Sum_probs=17.1
Q ss_pred HHHHHHHHHcCCCceEEEEEEcC
Q 039408 20 LVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+..|+++|.++||+ |++++..
T Consensus 7 ~~~l~~~L~~~G~~--V~v~~~~ 27 (160)
T PF13579_consen 7 VRELARALAARGHE--VTVVTPQ 27 (160)
T ss_dssp HHHHHHHHHHTT-E--EEEEEE-
T ss_pred HHHHHHHHHHCCCE--EEEEecC
Confidence 57899999999988 9999865
No 82
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=88.74 E-value=6.8 Score=42.66 Aligned_cols=45 Identities=11% Similarity=0.014 Sum_probs=34.3
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhc
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLM 423 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl 423 (456)
|+++|+|+|+.-. ......|.+. ..|..++. -+.++++++|.+++
T Consensus 663 AMAcGlPVVAT~~----GG~~EiV~dg-~tGfLVdp----------~D~eaLA~aL~~ll 707 (784)
T TIGR02470 663 AMTCGLPTFATRF----GGPLEIIQDG-VSGFHIDP----------YHGEEAAEKIVDFF 707 (784)
T ss_pred HHHcCCCEEEcCC----CCHHHHhcCC-CcEEEeCC----------CCHHHHHHHHHHHH
Confidence 9999999998644 4466667665 67888874 46788899988775
No 83
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=88.41 E-value=0.85 Score=44.86 Aligned_cols=122 Identities=18% Similarity=0.201 Sum_probs=66.1
Q ss_pred CCeEEEEeccCCcCC-CHHHHHHHHHHHHhcCCe-EEEEEeCCCC--Ccc-CC-C--Cc-cccccccccCchh-------
Q 039408 290 PSSVVFLCFGSMGSF-VGPQLREIAIGLQRVGFR-FLWSIREPSK--SKI-YL-P--GE-YTNLKVKEMLPEG------- 353 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~-~~~~~~~l~~al~~~~~~-~vw~~~~~~~--~~~-~~-~--~~-~~n~~~~~~lP~~------- 353 (456)
+++.+.+++|..... ....+..++++++....+ ++.++..... ... .. . .. .+|+.+....+..
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 276 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLK 276 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHH
Confidence 345677788876543 455677788888765432 4444332211 000 00 0 00 2344333222211
Q ss_pred ----HHhhcCCcee---EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC
Q 039408 354 ----FLNRTAGVGL---SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD 426 (456)
Q Consensus 354 ----f~~~~g~~G~---al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 426 (456)
|++..| |+ |+.+|+|+|+.+-. |. +..+.+. |+++.+. -+.+++.++|.+++. +
T Consensus 277 ~ad~~v~~Sg--gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~-----------~~~~~i~~~i~~ll~-~ 337 (363)
T cd03786 277 NADLVLTDSG--GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG-----------TDPEAILAAIEKLLS-D 337 (363)
T ss_pred cCcEEEEcCc--cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC-----------CCHHHHHHHHHHHhc-C
Confidence 222222 55 88999999998633 22 4445554 6665443 257899999999997 6
Q ss_pred hHHH
Q 039408 427 DEVR 430 (456)
Q Consensus 427 ~~~r 430 (456)
+..+
T Consensus 338 ~~~~ 341 (363)
T cd03786 338 EFAY 341 (363)
T ss_pred chhh
Confidence 5444
No 84
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=88.02 E-value=2.2 Score=41.29 Aligned_cols=56 Identities=16% Similarity=0.235 Sum_probs=36.0
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMR 437 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~ 437 (456)
|+++|+|+|+-... .....+. ..|..+.. -+.++++++|.+++. |++.+.+..+-+
T Consensus 292 a~a~G~pvI~~~~~----~~~e~~~---~~~~~~~~----------~~~~~~~~~i~~l~~-~~~~~~~~~~~~ 347 (365)
T cd03809 292 AMACGTPVIASNIS----SLPEVAG---DAALYFDP----------LDPEALAAAIERLLE-DPALREELRERG 347 (365)
T ss_pred HhcCCCcEEecCCC----Cccceec---CceeeeCC----------CCHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 99999999985542 2222222 23444442 378999999999987 776655544433
No 85
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=87.31 E-value=2.7 Score=40.66 Aligned_cols=49 Identities=16% Similarity=0.187 Sum_probs=35.3
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+.+.. .....+.+. ..|..+.. -+.++++++|.+++. ++.
T Consensus 281 a~a~G~Pvi~~~~~----~~~~~i~~~-~~g~~~~~----------~~~~~l~~~i~~~~~-~~~ 329 (355)
T cd03799 281 AMAMGLPVISTDVS----GIPELVEDG-ETGLLVPP----------GDPEALADAIERLLD-DPE 329 (355)
T ss_pred HHHcCCCEEecCCC----CcchhhhCC-CceEEeCC----------CCHHHHHHHHHHHHh-CHH
Confidence 99999999986543 233344443 47877662 378999999999997 653
No 86
>PLN00142 sucrose synthase
Probab=86.98 E-value=4.6 Score=44.05 Aligned_cols=52 Identities=13% Similarity=0.051 Sum_probs=35.1
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHh----cCCChHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRL----MDGDDEVRK 431 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~v----l~~~~~~r~ 431 (456)
|+++|+|+|+... ......|.+. ..|..++. -+.++++++|.++ +. |++.++
T Consensus 686 AMA~GlPVVATdv----GG~~EIV~dG-~tG~LV~P----------~D~eaLA~aI~~lLekLl~-Dp~lr~ 741 (815)
T PLN00142 686 AMTCGLPTFATCQ----GGPAEIIVDG-VSGFHIDP----------YHGDEAANKIADFFEKCKE-DPSYWN 741 (815)
T ss_pred HHHcCCCEEEcCC----CCHHHHhcCC-CcEEEeCC----------CCHHHHHHHHHHHHHHhcC-CHHHHH
Confidence 9999999998644 4456666664 56888774 3667777777654 45 654443
No 87
>PRK10307 putative glycosyl transferase; Provisional
Probab=86.19 E-value=6.1 Score=39.62 Aligned_cols=48 Identities=13% Similarity=0.006 Sum_probs=33.9
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD 427 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 427 (456)
++++|+|+|+....+.. ....+. +.|+.++. -+.++++++|.++++ ++
T Consensus 327 ama~G~PVi~s~~~g~~--~~~~i~---~~G~~~~~----------~d~~~la~~i~~l~~-~~ 374 (412)
T PRK10307 327 MLASGRNVVATAEPGTE--LGQLVE---GIGVCVEP----------ESVEALVAAIAALAR-QA 374 (412)
T ss_pred HHHcCCCEEEEeCCCch--HHHHHh---CCcEEeCC----------CCHHHHHHHHHHHHh-CH
Confidence 79999999998754311 122222 67777763 368999999999987 65
No 88
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=85.34 E-value=11 Score=30.94 Aligned_cols=100 Identities=16% Similarity=0.188 Sum_probs=58.3
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCCCCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPDQYK 85 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 85 (456)
|+++......| ...+++.|.++||+ |++++.... . ... ....++.+..++... .
T Consensus 2 Il~i~~~~~~~---~~~~~~~L~~~g~~--V~ii~~~~~-------~-~~~------~~~~~i~~~~~~~~~-------k 55 (139)
T PF13477_consen 2 ILLIGNTPSTF---IYNLAKELKKRGYD--VHIITPRND-------Y-EKY------EIIEGIKVIRLPSPR-------K 55 (139)
T ss_pred EEEEecCcHHH---HHHHHHHHHHCCCE--EEEEEcCCC-------c-hhh------hHhCCeEEEEecCCC-------C
Confidence 77777777666 45789999999977 999987421 1 111 113467777764221 0
Q ss_pred ChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCc-c--HHHHHHHhC-CCeEEE
Q 039408 86 STLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCT-S--MTDVANQLG-IPCYLY 148 (456)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~-~--~~~~A~~lg-iP~v~~ 148 (456)
.... ++. +. .+..+++. .+||+|.+..... + +..++...+ +|.+..
T Consensus 56 ~~~~----~~~-----~~-~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 56 SPLN----YIK-----YF-RLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred ccHH----HHH-----HH-HHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 1111 111 11 22444443 4899998777554 2 234567788 888754
No 89
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=84.84 E-value=0.59 Score=46.21 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=47.7
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHHh
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRTA 443 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a 443 (456)
|+++|+|+|..+-.++++. +.+. |.|+.+. .+.+++.+++++++. +++.+++..+-. +.
T Consensus 289 A~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~-----------~d~~~i~~ai~~ll~-~~~~~~~~~~~~----~~ 347 (365)
T TIGR00236 289 APSLGKPVLVLRDTTERPE----TVEA-GTNKLVG-----------TDKENITKAAKRLLT-DPDEYKKMSNAS----NP 347 (365)
T ss_pred HHHcCCCEEECCCCCCChH----HHhc-CceEEeC-----------CCHHHHHHHHHHHHh-ChHHHHHhhhcC----CC
Confidence 9999999999876666553 3334 7776554 368899999999997 776665544322 22
Q ss_pred hccCCCchhc
Q 039408 444 VMEEGSSNKS 453 (456)
Q Consensus 444 ~~~gGss~~~ 453 (456)
.++|++|.+.
T Consensus 348 ~g~~~a~~ri 357 (365)
T TIGR00236 348 YGDGEASERI 357 (365)
T ss_pred CcCchHHHHH
Confidence 3567777653
No 90
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=84.17 E-value=18 Score=34.54 Aligned_cols=111 Identities=11% Similarity=0.088 Sum_probs=67.4
Q ss_pred EEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCCCCCCh
Q 039408 8 LICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPDQYKST 87 (456)
Q Consensus 8 ~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 87 (456)
.+=..-.-|+.-|-.|-+.|.++||+ |.+.+-++. ...+..+.. +|.+..+.... . .+.
T Consensus 4 wiDI~n~~hvhfFk~lI~elekkG~e--v~iT~rd~~---~v~~LLd~y----------gf~~~~Igk~g----~--~tl 62 (346)
T COG1817 4 WIDIGNPPHVHFFKNLIWELEKKGHE--VLITCRDFG---VVTELLDLY----------GFPYKSIGKHG----G--VTL 62 (346)
T ss_pred EEEcCCcchhhHHHHHHHHHHhCCeE--EEEEEeecC---cHHHHHHHh----------CCCeEeecccC----C--ccH
Confidence 44456667888899999999999988 444332222 222445544 47777765322 0 112
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEeccc
Q 039408 88 LGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASP 152 (456)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~ 152 (456)
...+...... .-.|..+..+ .+||+.|. .+...+..+|--+|+|.+.|.-..
T Consensus 63 ~~Kl~~~~eR-----~~~L~ki~~~-------~kpdv~i~-~~s~~l~rvafgLg~psIi~~D~e 114 (346)
T COG1817 63 KEKLLESAER-----VYKLSKIIAE-------FKPDVAIG-KHSPELPRVAFGLGIPSIIFVDNE 114 (346)
T ss_pred HHHHHHHHHH-----HHHHHHHHhh-------cCCceEee-cCCcchhhHHhhcCCceEEecCCh
Confidence 2111111111 1224445433 69999998 777788899999999999986544
No 91
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=83.33 E-value=18 Score=31.47 Aligned_cols=43 Identities=12% Similarity=0.002 Sum_probs=31.7
Q ss_pred hHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHh-CCCeEEEe
Q 039408 101 HVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQL-GIPCYLYF 149 (456)
Q Consensus 101 ~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~l-giP~v~~~ 149 (456)
...+.+.+|.+ .+..||+||.+.-.-.++-+-+.+ ++|.+.|.
T Consensus 52 av~~a~~~L~~------~Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 52 AVARAARQLRA------QGFVPDVIIAHPGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred HHHHHHHHHHH------cCCCCCEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence 44455556665 347899999998776677888888 88988873
No 92
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=83.02 E-value=15 Score=35.04 Aligned_cols=44 Identities=11% Similarity=0.084 Sum_probs=31.2
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
|+++|+|+|+.... .+...+.+. ..|..++ . .++++++|.+++.
T Consensus 264 Ama~G~PvI~~~~~----~~~e~i~~~-~~g~l~~---------~---~~~l~~~l~~l~~ 307 (335)
T cd03802 264 AMACGTPVIAFRRG----AVPEVVEDG-VTGFLVD---------S---VEELAAAVARADR 307 (335)
T ss_pred HHhcCCCEEEeCCC----CchhheeCC-CcEEEeC---------C---HHHHHHHHHHHhc
Confidence 99999999987653 344444432 3676555 2 8899999998865
No 93
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=82.81 E-value=1.8 Score=44.41 Aligned_cols=42 Identities=21% Similarity=0.168 Sum_probs=37.0
Q ss_pred CCCeEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEeCC
Q 039408 289 PPSSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREP 330 (456)
Q Consensus 289 ~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~~~ 330 (456)
|+.-|||+||+-..-.+++.+..-...|+...--++|....+
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~ 468 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGG 468 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 457899999999999999999999999999888889987764
No 94
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=80.91 E-value=7.5 Score=39.11 Aligned_cols=49 Identities=10% Similarity=0.018 Sum_probs=35.7
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD 427 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 427 (456)
|+++|+|+|+-... .....+.+. ..|+.++. -+.++++++|.+++..|+
T Consensus 324 Ama~G~PVI~t~~~----g~~E~v~~~-~~G~lv~~----------~d~~~la~ai~~l~~~d~ 372 (406)
T PRK15427 324 AMAVGIPVVSTLHS----GIPELVEAD-KSGWLVPE----------NDAQALAQRLAAFSQLDT 372 (406)
T ss_pred HHhCCCCEEEeCCC----CchhhhcCC-CceEEeCC----------CCHHHHHHHHHHHHhCCH
Confidence 99999999987543 344555554 57777663 478999999999986244
No 95
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=79.75 E-value=1.6 Score=37.64 Aligned_cols=55 Identities=18% Similarity=0.217 Sum_probs=40.2
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVK 434 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~ 434 (456)
|+++|+|+|+. |...+...+.+. +.|..++. .+.++++++|.+++. +++++++..
T Consensus 112 a~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~~----------~~~~~l~~~i~~~l~-~~~~~~~l~ 166 (172)
T PF00534_consen 112 AMACGCPVIAS----DIGGNNEIINDG-VNGFLFDP----------NDIEELADAIEKLLN-DPELRQKLG 166 (172)
T ss_dssp HHHTT-EEEEE----SSTHHHHHSGTT-TSEEEEST----------TSHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred ccccccceeec----cccCCceeeccc-cceEEeCC----------CCHHHHHHHHHHHHC-CHHHHHHHH
Confidence 99999999974 456666666665 66888873 399999999999998 764444333
No 96
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=78.86 E-value=4.3 Score=39.91 Aligned_cols=49 Identities=10% Similarity=0.049 Sum_probs=35.6
Q ss_pred EEeeCcceeccc-cccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWP-LYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P-~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+.- .. .....+.+. ..|.-++. -+.++++++|.+++. +++
T Consensus 277 Ama~G~Pvv~s~~~~----g~~eiv~~~-~~G~lv~~----------~d~~~la~~i~~l~~-~~~ 326 (359)
T PRK09922 277 AMSYGIPCISSDCMS----GPRDIIKPG-LNGELYTP----------GNIDEFVGKLNKVIS-GEV 326 (359)
T ss_pred HHHcCCCEEEeCCCC----ChHHHccCC-CceEEECC----------CCHHHHHHHHHHHHh-Ccc
Confidence 999999999865 32 233445544 56777663 489999999999997 543
No 97
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=78.77 E-value=3.1 Score=41.42 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=38.2
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
|+++|+|+|+.... .+...+.+. ..|..+.. ..+.++++++|.++++ |++.+
T Consensus 297 Ama~G~PVI~s~~g----g~~Eiv~~~-~~G~~l~~---------~~d~~~la~~I~~ll~-d~~~~ 348 (380)
T PRK15484 297 AMAAGKPVLASTKG----GITEFVLEG-ITGYHLAE---------PMTSDSIISDINRTLA-DPELT 348 (380)
T ss_pred HHHcCCCEEEeCCC----CcHhhcccC-CceEEEeC---------CCCHHHHHHHHHHHHc-CHHHH
Confidence 99999999997653 345556554 57875541 3579999999999998 76543
No 98
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=77.20 E-value=3.2 Score=40.53 Aligned_cols=49 Identities=14% Similarity=0.075 Sum_probs=38.3
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+-+.. .+...+.+. +.|..++. -+.++++++|.+++. +++
T Consensus 290 A~a~G~PvI~s~~~----~~~e~i~~~-~~g~~~~~----------~d~~~l~~~i~~l~~-~~~ 338 (367)
T cd05844 290 AQASGVPVVATRHG----GIPEAVEDG-ETGLLVPE----------GDVAALAAALGRLLA-DPD 338 (367)
T ss_pred HHHcCCCEEEeCCC----CchhheecC-CeeEEECC----------CCHHHHHHHHHHHHc-CHH
Confidence 99999999987654 466666665 78876662 477999999999998 664
No 99
>PLN02275 transferase, transferring glycosyl groups
Probab=77.11 E-value=63 Score=31.89 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=30.7
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
++.++..+-.|.-.-+..++..|+++|| +.|++++..
T Consensus 6 ~~~~~~~~~~g~~~r~~~~~~~l~~~~~-~~v~vi~~~ 42 (371)
T PLN02275 6 RAAVVVLGDFGRSPRMQYHALSLARQAS-FQVDVVAYG 42 (371)
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHhcCC-ceEEEEEec
Confidence 5677777888999999999999999997 458888754
No 100
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=75.38 E-value=14 Score=36.91 Aligned_cols=26 Identities=15% Similarity=0.309 Sum_probs=21.6
Q ss_pred cCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 15 GNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 15 GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|--.=.+.|++.|+++||+ |+++++.
T Consensus 15 G~e~~~~~la~~L~~~G~~--V~v~~~~ 40 (398)
T cd03796 15 GVETHIYQLSQCLIKRGHK--VVVITHA 40 (398)
T ss_pred cHHHHHHHHHHHHHHcCCe--eEEEecc
Confidence 3346788999999999998 9999864
No 101
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=74.81 E-value=4 Score=33.46 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=28.0
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
++++|+|+|+.+.. ....+... +.|..+. -+.+++.++|++++.
T Consensus 91 ~~~~G~pvi~~~~~-----~~~~~~~~-~~~~~~~-----------~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 91 AMAAGKPVIASDNG-----AEGIVEED-GCGVLVA-----------NDPEELAEAIERLLN 134 (135)
T ss_dssp HHCTT--EEEEHHH-----CHCHS----SEEEE-T-----------T-HHHHHHHHHHHHH
T ss_pred HHHhCCCEEECCcc-----hhhheeec-CCeEEEC-----------CCHHHHHHHHHHHhc
Confidence 99999999998771 22233334 7776663 389999999999875
No 102
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=74.69 E-value=12 Score=36.90 Aligned_cols=55 Identities=16% Similarity=0.110 Sum_probs=37.5
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+... ..+...+.+. +.|..++.++.. ..-..++++++|.+++. +++
T Consensus 300 A~a~G~PvI~s~~----~~~~e~i~~~-~~G~~~~~~~~~----~~~~~~~l~~~i~~l~~-~~~ 354 (388)
T TIGR02149 300 AMACGTPVVASAT----GGIPEVVVDG-ETGFLVPPDNSD----ADGFQAELAKAINILLA-DPE 354 (388)
T ss_pred HHHcCCCEEEeCC----CCHHHHhhCC-CceEEcCCCCCc----ccchHHHHHHHHHHHHh-CHH
Confidence 9999999998654 4566666665 678887742100 11223899999999997 653
No 103
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=71.38 E-value=16 Score=32.72 Aligned_cols=24 Identities=13% Similarity=0.081 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHcCCCceEEEEEEcCC
Q 039408 18 VPLVEFAHLLTNRDRRFCATVLIMTV 43 (456)
Q Consensus 18 ~P~l~La~~L~~rGH~~~Vt~~t~~~ 43 (456)
--+..|+++|.+.||+ |+++.+..
T Consensus 14 ~Gi~aL~~~L~~~g~~--V~VvAP~~ 37 (196)
T PF01975_consen 14 PGIRALAKALSALGHD--VVVVAPDS 37 (196)
T ss_dssp HHHHHHHHHHTTTSSE--EEEEEESS
T ss_pred HHHHHHHHHHHhcCCe--EEEEeCCC
Confidence 4467899999888888 99999873
No 104
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=69.44 E-value=6.3 Score=39.77 Aligned_cols=45 Identities=13% Similarity=0.169 Sum_probs=34.5
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD 426 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 426 (456)
|+++|+|+|+... ......+.+. +.|+.+. +.++++++|.++++ |
T Consensus 337 ama~G~PVI~s~~----~~~~eiv~~~-~~G~lv~------------d~~~la~~i~~ll~-~ 381 (415)
T cd03816 337 MFGCGLPVCALDF----KCIDELVKHG-ENGLVFG------------DSEELAEQLIDLLS-N 381 (415)
T ss_pred HHHcCCCEEEeCC----CCHHHHhcCC-CCEEEEC------------CHHHHHHHHHHHHh-c
Confidence 9999999998543 3555666665 6787653 57999999999998 5
No 105
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=69.42 E-value=8.1 Score=29.38 Aligned_cols=60 Identities=17% Similarity=0.129 Sum_probs=35.6
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh-HHHHHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD-EVRKKVKEMREKSR 441 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~r~~A~~l~~~~~ 441 (456)
++++|+|+|+... ......+.+ |.....- . +.+++.++|+.++. |+ .+++-|++-.+.++
T Consensus 18 ~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~----------~-~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 18 AMACGTPVISDDS----PGLREIFED--GEHIITY----------N-DPEELAEKIEYLLE-NPEERRRIAKNARERVL 78 (92)
T ss_pred HHHCCCeEEECCh----HHHHHHcCC--CCeEEEE----------C-CHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
Confidence 7888999988765 222222221 3222222 2 89999999999998 76 44444444444443
No 106
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=69.24 E-value=6.7 Score=38.54 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=40.2
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh----HHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD----EVRKKVKEM 436 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~----~~r~~A~~l 436 (456)
|+++|+|+|+..... .....+.+. ..|..++. -+.++++++|.+++. ++ +++++|.+.
T Consensus 298 Ama~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~----------~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~ 359 (372)
T cd04949 298 ALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPK----------GDIEALAEAIIELLN-DPKLLQKFSEAAYEN 359 (372)
T ss_pred HHhCCCCEEEecCCC---CcHHHcccC-CCceEeCC----------CcHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 999999999865331 234555554 67777663 478999999999998 65 344444444
No 107
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=68.31 E-value=8.3 Score=36.94 Aligned_cols=59 Identities=15% Similarity=0.127 Sum_probs=38.3
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh-HHHHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD-EVRKKVKEMREKS 440 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~r~~A~~l~~~~ 440 (456)
|+++|+|+|+. |...+...+.+ .|..++. -+.++++++|.++++ ++ .+++.+++..+.+
T Consensus 288 a~a~g~PvI~~----~~~~~~e~~~~---~g~~~~~----------~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~ 347 (365)
T cd03807 288 AMACGLPVVAT----DVGDNAELVGD---TGFLVPP----------GDPEALAEAIEALLA-DPALRQALGEAARERI 347 (365)
T ss_pred HHhcCCCEEEc----CCCChHHHhhc---CCEEeCC----------CCHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 99999999985 44455555544 4555552 368999999999998 64 3333333333333
No 108
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=67.29 E-value=4.5 Score=39.23 Aligned_cols=55 Identities=9% Similarity=0.105 Sum_probs=36.8
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKE 435 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~ 435 (456)
|+++|+|+|+. |...+...+.+. |. .+. .-+.++++++|.+++..++.+++...+
T Consensus 282 a~a~G~PvI~~----~~~~~~e~i~~~-g~--~~~----------~~~~~~~~~~i~~ll~~~~~~~~~~~~ 336 (360)
T cd04951 282 AMACELPVVAT----DAGGVREVVGDS-GL--IVP----------ISDPEALANKIDEILKMSGEERDIIGA 336 (360)
T ss_pred HHHcCCCEEEe----cCCChhhEecCC-ce--EeC----------CCCHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999974 555566655542 44 334 247889999999998525555554433
No 109
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=66.98 E-value=8.6 Score=37.84 Aligned_cols=49 Identities=12% Similarity=0.073 Sum_probs=36.7
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+-... .+...+.+. ..|..++. -+.++++++|.+++. +++
T Consensus 292 Ama~G~Pvv~s~~~----g~~e~i~~~-~~g~~~~~----------~d~~~la~~i~~l~~-~~~ 340 (374)
T TIGR03088 292 AMASGLPVIATAVG----GNPELVQHG-VTGALVPP----------GDAVALARALQPYVS-DPA 340 (374)
T ss_pred HHHcCCCEEEcCCC----CcHHHhcCC-CceEEeCC----------CCHHHHHHHHHHHHh-CHH
Confidence 99999999996653 355555554 56776663 477899999999997 654
No 110
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=65.93 E-value=9.8 Score=39.16 Aligned_cols=54 Identities=17% Similarity=0.242 Sum_probs=38.2
Q ss_pred EEeeCcceeccccccccchhHHHHHHh----h-cceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKE----L-RLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKK 432 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~----~-G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~ 432 (456)
|+++|+|+|+- |.......+.+. + ..|..++. -+.++++++|.+++. |++.+++
T Consensus 390 Ama~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~~----------~d~~~la~ai~~ll~-~~~~~~~ 448 (475)
T cd03813 390 AMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVPP----------ADPEALARAILRLLK-DPELRRA 448 (475)
T ss_pred HHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEECC----------CCHHHHHHHHHHHhc-CHHHHHH
Confidence 99999999984 555555555542 0 26766663 578999999999998 7654443
No 111
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=65.90 E-value=8.4 Score=38.47 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=34.7
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
|+++|+|+|+.+...+.. .... |.|+.+. -+.++++++|.++++ |++.+
T Consensus 318 Ama~G~PVV~t~~~~~~i-----~~~~-~~g~lv~-----------~~~~~la~ai~~ll~-~~~~~ 366 (397)
T TIGR03087 318 AMAMAKPVVASPEAAEGI-----DALP-GAELLVA-----------ADPADFAAAILALLA-NPAER 366 (397)
T ss_pred HHHcCCCEEecCcccccc-----cccC-CcceEeC-----------CCHHHHHHHHHHHHc-CHHHH
Confidence 999999999988643321 1223 6666554 368999999999998 76433
No 112
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=64.45 E-value=10 Score=30.60 Aligned_cols=36 Identities=17% Similarity=0.060 Sum_probs=32.2
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+++.+.++-.|.....-++..|.++|++ |.++...
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~--V~~lg~~ 36 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFE--VIDLGVD 36 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCE--EEECCCC
Confidence 48999999999999999999999999966 9887654
No 113
>PHA01633 putative glycosyl transferase group 1
Probab=62.91 E-value=9.7 Score=37.18 Aligned_cols=50 Identities=14% Similarity=0.118 Sum_probs=33.1
Q ss_pred EEeeCcceecccc------cccc------chhHHHHH--HhhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 364 SLWYGVPIATWPL------YAEQ------QMNAFELV--KELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 364 al~~GVP~v~~P~------~~DQ------~~na~~v~--~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
|+++|+|+|+--. .+|+ ..+..... +. |.|..++ ..++++++++|++++.
T Consensus 243 AMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~-g~g~~~~----------~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 243 SMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEH-GQKWKIH----------KFQIEDMANAIILAFE 306 (335)
T ss_pred HHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCccc-Cceeeec----------CCCHHHHHHHHHHHHh
Confidence 8999999998633 3343 33333333 23 5665555 4799999999999843
No 114
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=62.49 E-value=25 Score=27.10 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=19.2
Q ss_pred CCeeEEEEcCCCcc---------HHHHHHHhCCCeEE
Q 039408 120 DRVAGLFIDMFCTS---------MTDVANQLGIPCYL 147 (456)
Q Consensus 120 ~~~d~vI~D~~~~~---------~~~~A~~lgiP~v~ 147 (456)
.+.|+||..+.-.. ...+|.+++||+++
T Consensus 59 ~~IdlVIn~~~~~~~~~~~dg~~irr~a~~~~Ip~~T 95 (95)
T PF02142_consen 59 GKIDLVINTPYPFSDQEHTDGYKIRRAAVEYNIPLFT 95 (95)
T ss_dssp TSEEEEEEE--THHHHHTHHHHHHHHHHHHTTSHEEC
T ss_pred CCeEEEEEeCCCCcccccCCcHHHHHHHHHcCCCCcC
Confidence 58999998775432 24678899999763
No 115
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=60.25 E-value=13 Score=37.69 Aligned_cols=66 Identities=15% Similarity=0.153 Sum_probs=43.6
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEE-ecccccCCCCCcccchHHHHHHHHHhcCCChHHH----HHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVE-IRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR----KKVKEMRE 438 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~-l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r----~~A~~l~~ 438 (456)
|+..|||.++++. |+-. ...+.+ +|..-. .+. +.++.++|.+.+.+++.+.+++| +++.++++
T Consensus 342 a~~~gvP~i~i~Y--~~K~-~~~~~~-lg~~~~~~~~--------~~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~ 409 (426)
T PRK10017 342 SMNFGTPAIAINY--EHKS-AGIMQQ-LGLPEMAIDI--------RHLLDGSLQAMVADTLGQLPALNARLAEAVSRERQ 409 (426)
T ss_pred HHHcCCCEEEeee--hHHH-HHHHHH-cCCccEEech--------hhCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 9999999999988 4333 333455 487654 333 46888999999999998324444 44444444
Q ss_pred HHH
Q 039408 439 KSR 441 (456)
Q Consensus 439 ~~~ 441 (456)
+..
T Consensus 410 ~~~ 412 (426)
T PRK10017 410 TGM 412 (426)
T ss_pred HHH
Confidence 433
No 116
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=59.98 E-value=18 Score=31.10 Aligned_cols=36 Identities=22% Similarity=0.098 Sum_probs=28.5
Q ss_pred EEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEe
Q 039408 293 VVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIR 328 (456)
Q Consensus 293 vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~ 328 (456)
.+|+|+||.......+++....+|.+.+.--|+...
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~S 38 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAVS 38 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEec
Confidence 599999999888888899999999987653344443
No 117
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=58.86 E-value=82 Score=31.75 Aligned_cols=119 Identities=9% Similarity=-0.058 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCC-C-CCCCCCCCCCChHHHHHHH
Q 039408 17 LVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLP-S-VDPPSPDQYKSTLGYLSLF 94 (456)
Q Consensus 17 ~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~-~-~~~~~~~~~~~~~~~~~~~ 94 (456)
=.-++..+++|.+++++++|+++|+....... .......+.-......++.++.+. . ...+... ...+..+
T Consensus 17 ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~--~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-----~~r~~~~ 89 (419)
T cd03806 17 ERVLWCAVRALQKRYPNNIVVIYTGDLDATPE--EILEKVESRFNIELDRPRIVFFLLKYRKLVEAST-----YPRFTLL 89 (419)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEECCCCCCCHH--HHHHHHHHhcCeecCCCceEEEEecceeeecccc-----CCceeeH
Confidence 36678899999998433459999986433221 111111100001123345544431 1 1111111 0001111
Q ss_pred HHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHH-hCCCeEEEecc
Q 039408 95 IEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQ-LGIPCYLYFAS 151 (456)
Q Consensus 95 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~-lgiP~v~~~~~ 151 (456)
..... .+...++.+.. .+||++|.+.-...+..++.. .++|.+.+.-.
T Consensus 90 ~~~~~-~~~~~~~~~~~--------~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~ 138 (419)
T cd03806 90 GQALG-SMILGLEALLK--------LVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHY 138 (419)
T ss_pred HHHHH-HHHHHHHHHHh--------cCCCEEEEcCCcccHHHHHHHhcCCeEEEEecC
Confidence 11111 12122333322 379999888766666777765 47898887543
No 118
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=56.72 E-value=2.9e+02 Score=30.02 Aligned_cols=61 Identities=20% Similarity=0.253 Sum_probs=40.0
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC---CChHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD---GDDEVRKKVKEMR 437 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~---~~~~~r~~A~~l~ 437 (456)
|+++|+|+|+.... .+...+.+. ..|+-++. +..+.+++++++.+++. .++.+++++++..
T Consensus 611 AMA~G~PVVat~~g----G~~EiV~dg-~~GlLv~~--------~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 611 AQFSGVPVVTTLAG----GAGEAVQEG-VTGLTLPA--------DTVTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred HHHcCCeEEEECCC----ChHHHccCC-CCEEEeCC--------CCCChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 99999999997653 355556554 56888774 23555666666665553 1567777776544
No 119
>PLN02846 digalactosyldiacylglycerol synthase
Probab=55.62 E-value=12 Score=38.31 Aligned_cols=39 Identities=26% Similarity=0.290 Sum_probs=29.3
Q ss_pred CCcEEEEEcCCCC----cCHHHHHHHHHHHHcCC-CceEEEEEEcC
Q 039408 2 KKFRVVLICTPEM----GNLVPLVEFAHLLTNRD-RRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~----GH~~P~l~La~~L~~rG-H~~~Vt~~t~~ 42 (456)
+|+||++++-... |=..=.+.++..|+++| |+ |+++.+.
T Consensus 3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~he--V~vvaP~ 46 (462)
T PLN02846 3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDRE--VTLVIPW 46 (462)
T ss_pred CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcE--EEEEecC
Confidence 4679999986644 44344567777999999 68 9999875
No 120
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=55.41 E-value=1.5e+02 Score=28.72 Aligned_cols=32 Identities=9% Similarity=0.147 Sum_probs=22.5
Q ss_pred EcCCCCcCHHHHHHHHHHHHcC-CCceEEEEEEcC
Q 039408 9 ICTPEMGNLVPLVEFAHLLTNR-DRRFCATVLIMT 42 (456)
Q Consensus 9 ~~~~~~GH~~P~l~La~~L~~r-GH~~~Vt~~t~~ 42 (456)
+-.+++....=+-.|.++|.++ |++ +.++.+.
T Consensus 4 ~~~gtr~~~~~~~pl~~~l~~~~~~~--~~~~~tg 36 (363)
T cd03786 4 VVTGTRPEYIKLAPLIRALKKDPGFE--LVLVVTG 36 (363)
T ss_pred EEEecCHHHHHHHHHHHHHhcCCCCC--EEEEEeC
Confidence 3446777777777788889987 766 7765543
No 121
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.07 E-value=28 Score=33.14 Aligned_cols=65 Identities=15% Similarity=0.165 Sum_probs=45.5
Q ss_pred CCcee----EEeeCcceeccccccccch--hHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHH
Q 039408 359 AGVGL----SLWYGVPIATWPLYAEQQM--NAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKK 432 (456)
Q Consensus 359 g~~G~----al~~GVP~v~~P~~~DQ~~--na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~ 432 (456)
+..|+ ++-.|+|.|.+|-.+-||. .|.+=.+.+|+.+.+-. .....-..+..++|. |+.+..+
T Consensus 317 gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~----------~~aq~a~~~~q~ll~-dp~r~~a 385 (412)
T COG4370 317 GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR----------PEAQAAAQAVQELLG-DPQRLTA 385 (412)
T ss_pred HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC----------CchhhHHHHHHHHhc-ChHHHHH
Confidence 45666 9999999999999999964 67777778888887763 223333334445887 7766555
Q ss_pred HH
Q 039408 433 VK 434 (456)
Q Consensus 433 A~ 434 (456)
.+
T Consensus 386 ir 387 (412)
T COG4370 386 IR 387 (412)
T ss_pred HH
Confidence 44
No 122
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=54.05 E-value=8 Score=37.98 Aligned_cols=80 Identities=20% Similarity=0.168 Sum_probs=44.8
Q ss_pred EEeeCcceeccccc--cccchhHHHHHHh--hcceEEe-c----ccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHH
Q 039408 364 SLWYGVPIATWPLY--AEQQMNAFELVKE--LRLAVEI-R----LDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVK 434 (456)
Q Consensus 364 al~~GVP~v~~P~~--~DQ~~na~~v~~~--~G~G~~l-~----~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~ 434 (456)
+..+|+|+|+ +.- .=|+.||+++++. .|..-.+ + +.--++--.+.+|++.|.+++.+ . .+++.+
T Consensus 250 ~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~-~-----~~~~~~ 322 (347)
T PRK14089 250 AALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE-M-----DREKFF 322 (347)
T ss_pred HHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH-H-----HHHHHH
Confidence 8999999999 543 3578899999832 1333222 1 00000000146899999999977 2 344444
Q ss_pred HHHHHHHHhhccCCCch
Q 039408 435 EMREKSRTAVMEEGSSN 451 (456)
Q Consensus 435 ~l~~~~~~a~~~gGss~ 451 (456)
+..+.+++..++ |+|.
T Consensus 323 ~~~~~l~~~l~~-~a~~ 338 (347)
T PRK14089 323 KKSKELREYLKH-GSAK 338 (347)
T ss_pred HHHHHHHHHhcC-CHHH
Confidence 444444444444 4433
No 123
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=53.76 E-value=1.4e+02 Score=29.37 Aligned_cols=25 Identities=16% Similarity=0.025 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 16 NLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 16 H~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+..=-.+|+.+|+++||+ |.|+.+.
T Consensus 18 ~~~~~qhl~~~~a~~~~~--vl~v~~~ 42 (373)
T cd04950 18 LWQRPQHLAARLAERGNR--VLYVEPP 42 (373)
T ss_pred CCCCHHHHHHHHHhCCCe--EEEEeCC
Confidence 455668999999999988 9999864
No 124
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=52.64 E-value=54 Score=32.62 Aligned_cols=44 Identities=11% Similarity=0.026 Sum_probs=30.1
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
|+++|+|+|+....+ ....+. . |.+.-.. .+.++++++|.+++.
T Consensus 289 Ama~G~PVI~s~~gg----~~e~i~-~-~~~~~~~-----------~~~~~l~~~l~~~l~ 332 (398)
T cd03796 289 AASCGLLVVSTRVGG----IPEVLP-P-DMILLAE-----------PDVESIVRKLEEAIS 332 (398)
T ss_pred HHHcCCCEEECCCCC----chhhee-C-CceeecC-----------CCHHHHHHHHHHHHh
Confidence 999999999977653 233333 3 4332222 367899999999887
No 125
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=52.07 E-value=44 Score=32.11 Aligned_cols=117 Identities=15% Similarity=0.148 Sum_probs=0.0
Q ss_pred hhhccCCCCeEEEEeccCCc---CCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchhHHhhcC
Q 039408 283 KWLDDQPPSSVVFLCFGSMG---SFVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEGFLNRTA 359 (456)
Q Consensus 283 ~wLd~~~~~~vVyvsfGS~~---~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~f~~~~g 359 (456)
+|+....+++.|.+.-|+.. .++.+.+.++++.|...+.++++..+.+. ....-+.+....+
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~---------------e~~~~~~i~~~~~ 235 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA---------------EKQRAERIAEALP 235 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH---------------HHHHHHHHHhhCC
Q ss_pred Ccee-----------------------------EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCccc
Q 039408 360 GVGL-----------------------------SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLV 410 (456)
Q Consensus 360 ~~G~-----------------------------al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~ 410 (456)
+.-+ |.+.|+|+|+ +++ +.+..+..=. |-...+-....-+ .+
T Consensus 236 ~~~l~g~~sL~el~ali~~a~l~I~~DSgp~HlAaa~g~P~i~--lfg--~t~p~~~~P~-~~~~~~~~~~~~~----~I 306 (319)
T TIGR02193 236 GAVVLPKMSLAEVAALLAGADAVVGVDTGLTHLAAALDKPTVT--LYG--ATDPGRTGGY-GKPNVALLGESGA----NP 306 (319)
T ss_pred CCeecCCCCHHHHHHHHHcCCEEEeCCChHHHHHHHcCCCEEE--EEC--CCCHhhcccC-CCCceEEccCccC----CC
Q ss_pred chHHHHHHHHHhc
Q 039408 411 SAEEIEWGLRRLM 423 (456)
Q Consensus 411 ~~~~l~~ai~~vl 423 (456)
++++|.+|++++|
T Consensus 307 ~~~~V~~ai~~~~ 319 (319)
T TIGR02193 307 TPDEVLAALEELL 319 (319)
T ss_pred CHHHHHHHHHhhC
No 126
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=52.07 E-value=13 Score=35.94 Aligned_cols=55 Identities=13% Similarity=0.053 Sum_probs=37.2
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKE 435 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~ 435 (456)
|+++|+|+|+-...+ ....+.+ +.|..+. .-+.++++++|.+++. +++.+++...
T Consensus 286 Ama~G~PvI~s~~~~----~~~~i~~--~~~~~~~----------~~~~~~~a~~i~~l~~-~~~~~~~~~~ 340 (358)
T cd03812 286 AQASGLPCILSDTIT----KEVDLTD--LVKFLSL----------DESPEIWAEEILKLKS-EDRRERSSES 340 (358)
T ss_pred HHHhCCCEEEEcCCc----hhhhhcc--CccEEeC----------CCCHHHHHHHHHHHHh-Ccchhhhhhh
Confidence 999999999865544 3333333 5555444 2357999999999998 7655554433
No 127
>PRK10307 putative glycosyl transferase; Provisional
Probab=51.44 E-value=29 Score=34.69 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=25.0
Q ss_pred EEEEEcC---CCCcCH-HHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICT---PEMGNL-VPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~---~~~GH~-~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
||++++. |-.|=+ .-...|+++|.++||+ |+++|+.
T Consensus 2 kIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~--V~vit~~ 41 (412)
T PRK10307 2 KILVYGINYAPELTGIGKYTGEMAEWLAARGHE--VRVITAP 41 (412)
T ss_pred eEEEEecCCCCCccchhhhHHHHHHHHHHCCCe--EEEEecC
Confidence 4777763 322211 1257999999999988 9999964
No 128
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=51.37 E-value=14 Score=31.21 Aligned_cols=28 Identities=21% Similarity=0.186 Sum_probs=22.4
Q ss_pred CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 13 EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 13 ~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
.-|=-.-.+.|+++|+++||+ |++++..
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~--v~v~~~~ 38 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHE--VTVVSPG 38 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-E--EEEEESS
T ss_pred CChHHHHHHHHHHHHHHCCCE--EEEEEcC
Confidence 445557789999999999988 9999865
No 129
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=51.30 E-value=85 Score=31.08 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=40.1
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKK 432 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~ 432 (456)
|-..|+|.+++=...++|. .+ +. |.-+.+. .+.+.+.+++.++++ +++..+|
T Consensus 296 Ap~lg~Pvl~lR~~TERPE---~v-~a-gt~~lvg-----------~~~~~i~~~~~~ll~-~~~~~~~ 347 (383)
T COG0381 296 APSLGKPVLVLRDTTERPE---GV-EA-GTNILVG-----------TDEENILDAATELLE-DEEFYER 347 (383)
T ss_pred HHhcCCcEEeeccCCCCcc---ce-ec-CceEEeC-----------ccHHHHHHHHHHHhh-ChHHHHH
Confidence 9999999999999999998 22 23 5544444 567999999999998 7655553
No 130
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=49.51 E-value=1.4e+02 Score=28.50 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=27.3
Q ss_pred EEEEcC--CCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 6 VVLICT--PEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 6 il~~~~--~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+++.. ..-|.-.-...++++|.++||+ |++++..
T Consensus 2 Il~~~~~~~~GG~~~~~~~l~~~L~~~~~~--v~~i~~~ 38 (358)
T cd03812 2 ILHIVGTMNRGGIETFIMNYYRNLDRSKIQ--FDFLVTS 38 (358)
T ss_pred EEEEeCCCCCccHHHHHHHHHHhcCccceE--EEEEEeC
Confidence 444433 4677788899999999999977 9998865
No 131
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=49.24 E-value=1.5e+02 Score=28.01 Aligned_cols=34 Identities=21% Similarity=0.099 Sum_probs=26.6
Q ss_pred EEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 7 VLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 7 l~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
++..+..-|+-.....|+++|.+.||+ |.+++..
T Consensus 5 i~~~~~~gG~~~~~~~l~~~l~~~~~~--v~~~~~~ 38 (365)
T cd03807 5 VITGLDVGGAERMLVRLLKGLDRDRFE--HVVISLT 38 (365)
T ss_pred EEeeccCccHHHHHHHHHHHhhhccce--EEEEecC
Confidence 344445688999999999999999988 7777643
No 132
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=49.18 E-value=32 Score=30.79 Aligned_cols=40 Identities=20% Similarity=-0.000 Sum_probs=34.8
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVP 44 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~ 44 (456)
+.++++.+.++-.|-....-++..|..+|++ |+++....|
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~--vi~lG~~~p 121 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFE--VIDLGRDVP 121 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCE--EEECCCCCC
Confidence 4589999999999999999999999999966 988876544
No 133
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=48.03 E-value=24 Score=23.05 Aligned_cols=27 Identities=19% Similarity=0.405 Sum_probs=20.2
Q ss_pred chHHHHHHHHHhcCCChHHHHHHHHHH
Q 039408 411 SAEEIEWGLRRLMDGDDEVRKKVKEMR 437 (456)
Q Consensus 411 ~~~~l~~ai~~vl~~~~~~r~~A~~l~ 437 (456)
++++|.+||..|..+.-++|+.|++.+
T Consensus 1 tee~l~~Ai~~v~~g~~S~r~AA~~yg 27 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMSIRKAAKKYG 27 (45)
T ss_dssp -HHHHHHHHHHHHTTSS-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHHC
Confidence 578999999999973368888888763
No 134
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=47.50 E-value=29 Score=28.20 Aligned_cols=36 Identities=6% Similarity=-0.016 Sum_probs=24.6
Q ss_pred EEEEEcCCCCc---CHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMG---NLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~G---H~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+|+|+--|..+ .-.-.++|+.+-.+|||+ |.+++..
T Consensus 2 ki~fvmDpi~~i~~~kDTT~alm~eAq~RGhe--v~~~~~~ 40 (119)
T PF02951_consen 2 KIAFVMDPIESIKPYKDTTFALMLEAQRRGHE--VFYYEPG 40 (119)
T ss_dssp EEEEEES-GGG--TTT-HHHHHHHHHHHTT-E--EEEE-GG
T ss_pred eEEEEeCCHHHCCCCCChHHHHHHHHHHCCCE--EEEEEcC
Confidence 46777666555 345678999999999998 9888764
No 135
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=46.69 E-value=35 Score=30.45 Aligned_cols=49 Identities=14% Similarity=-0.071 Sum_probs=39.6
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhh
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRD 57 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~ 57 (456)
+.++++.+.++-.|-....-++..|..+|.+ |+++....|.+ .+++.+.
T Consensus 84 ~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~--vi~LG~~vp~e----~~v~~~~ 132 (197)
T TIGR02370 84 LGKVVCGVAEGDVHDIGKNIVVTMLRANGFD--VIDLGRDVPID----TVVEKVK 132 (197)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCcE--EEECCCCCCHH----HHHHHHH
Confidence 3589999999999999999999999999954 99998765532 4555543
No 136
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=46.08 E-value=52 Score=27.63 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=30.1
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEe
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIR 328 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~ 328 (456)
.+.+|.|++||......+.++++++.+. .+.+++|+..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 4579999999998888888999888885 3577777643
No 137
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=46.05 E-value=21 Score=34.37 Aligned_cols=34 Identities=12% Similarity=0.280 Sum_probs=26.9
Q ss_pred EEEEcC--CCCcCHHHHHHHHHHHHcCCCceEEEEEEc
Q 039408 6 VVLICT--PEMGNLVPLVEFAHLLTNRDRRFCATVLIM 41 (456)
Q Consensus 6 il~~~~--~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~ 41 (456)
|+++.. ...|+.+..+.|++.|.++||+ |++++.
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~--v~v~~~ 37 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQ--VAIISL 37 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCce--EEEEEE
Confidence 444433 3578899999999999999988 888764
No 138
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=45.52 E-value=1.2e+02 Score=26.82 Aligned_cols=28 Identities=18% Similarity=0.313 Sum_probs=20.0
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcC--CCc
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNR--DRR 33 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~r--GH~ 33 (456)
++.+=..+.|-++-...|+++|.++ |+.
T Consensus 23 ~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~ 52 (186)
T PF04413_consen 23 LIWIHAASVGEVNAARPLIKRLRKQRPDLR 52 (186)
T ss_dssp -EEEE-SSHHHHHHHHHHHHHHTT---TS-
T ss_pred cEEEEECCHHHHHHHHHHHHHHHHhCCCCe
Confidence 4444567789999999999999998 554
No 139
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=44.53 E-value=1e+02 Score=28.43 Aligned_cols=108 Identities=8% Similarity=0.077 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCCCCCChHHHHHHHHH
Q 039408 17 LVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPDQYKSTLGYLSLFIE 96 (456)
Q Consensus 17 ~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (456)
+.|..++..+|.+-|-+ +|.++|+ ++.. .+....+.+. ..||++..+.......+.+ +.+
T Consensus 105 tt~~~A~~~AL~alg~~-RIalvTP-Y~~~-v~~~~~~~l~-------~~G~eV~~~~~~~~~~~~~----------ia~ 164 (239)
T TIGR02990 105 VTPSSAAVDGLAALGVR-RISLLTP-YTPE-TSRPMAQYFA-------VRGFEIVNFTCLGLTDDRE----------MAR 164 (239)
T ss_pred eCHHHHHHHHHHHcCCC-EEEEECC-CcHH-HHHHHHHHHH-------hCCcEEeeeeccCCCCCce----------eee
Confidence 47888899999988853 5888876 3321 2223333333 4567776653211111110 001
Q ss_pred HhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHH----HHHhCCCeEEEeccc
Q 039408 97 KHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDV----ANQLGIPCYLYFASP 152 (456)
Q Consensus 97 ~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~----A~~lgiP~v~~~~~~ 152 (456)
...+.+.+.+.++. ..++|.|+.-.-...+.++ =+++|+|++......
T Consensus 165 i~p~~i~~~~~~~~--------~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNqat 216 (239)
T TIGR02990 165 ISPDCIVEAALAAF--------DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQAT 216 (239)
T ss_pred cCHHHHHHHHHHhc--------CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHHHH
Confidence 11122233333332 2468888766544444433 357899987654333
No 140
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=43.92 E-value=2.2e+02 Score=24.74 Aligned_cols=20 Identities=15% Similarity=0.272 Sum_probs=17.4
Q ss_pred EEcCCCCcCHHHHHHHHHHH
Q 039408 8 LICTPEMGNLVPLVEFAHLL 27 (456)
Q Consensus 8 ~~~~~~~GH~~P~l~La~~L 27 (456)
++-.++-||..=|+.|.+.+
T Consensus 2 l~v~gsGGHt~eml~L~~~~ 21 (170)
T PF08660_consen 2 LVVLGSGGHTAEMLRLLKAL 21 (170)
T ss_pred EEEEcCcHHHHHHHHHHHHh
Confidence 34567889999999999999
No 141
>PRK08760 replicative DNA helicase; Provisional
Probab=43.31 E-value=1.3e+02 Score=31.14 Aligned_cols=35 Identities=20% Similarity=0.347 Sum_probs=30.1
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHc-CCCceEEEEEEcC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTN-RDRRFCATVLIMT 42 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~-rGH~~~Vt~~t~~ 42 (456)
+++..-|+.|=..-.+.+|...+. .|+. |.|++.+
T Consensus 232 ivIaarPg~GKTafal~iA~~~a~~~g~~--V~~fSlE 267 (476)
T PRK08760 232 IILAARPAMGKTTFALNIAEYAAIKSKKG--VAVFSME 267 (476)
T ss_pred EEEEeCCCCChhHHHHHHHHHHHHhcCCc--eEEEecc
Confidence 677888999999999999999875 4866 9899876
No 142
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=43.29 E-value=77 Score=31.09 Aligned_cols=126 Identities=13% Similarity=0.192 Sum_probs=64.7
Q ss_pred CCCeEEEEeccCCcCCC-H---HHHHHHHHHHHhc-CCeEEEEEeCCCCCcc----CCCCccccccccccCch-hHH---
Q 039408 289 PPSSVVFLCFGSMGSFV-G---PQLREIAIGLQRV-GFRFLWSIREPSKSKI----YLPGEYTNLKVKEMLPE-GFL--- 355 (456)
Q Consensus 289 ~~~~vVyvsfGS~~~~~-~---~~~~~l~~al~~~-~~~~vw~~~~~~~~~~----~~~~~~~n~~~~~~lP~-~f~--- 355 (456)
.+++.++|++=...... + .++.+++++|.+. +.++||.+.....+.. .+... +|+++.+-++. .|+
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll 256 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLL 256 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHH
Confidence 46789999986655555 3 3455566666666 7889999884311100 01111 35544444442 222
Q ss_pred hhc----C-Ccee---EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh
Q 039408 356 NRT----A-GVGL---SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD 427 (456)
Q Consensus 356 ~~~----g-~~G~---al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 427 (456)
.+. + .+|+ |.+.|+|.|.+ -|+-..-.-+. . |..+-+. .+.++|.++|++++. +.
T Consensus 257 ~~a~~vvgdSsGI~eEa~~lg~P~v~i---R~~geRqe~r~-~-~~nvlv~-----------~~~~~I~~ai~~~l~-~~ 319 (346)
T PF02350_consen 257 KNADLVVGDSSGIQEEAPSLGKPVVNI---RDSGERQEGRE-R-GSNVLVG-----------TDPEAIIQAIEKALS-DK 319 (346)
T ss_dssp HHESEEEESSHHHHHHGGGGT--EEEC---SSS-S-HHHHH-T-TSEEEET-----------SSHHHHHHHHHHHHH--H
T ss_pred hcceEEEEcCccHHHHHHHhCCeEEEe---cCCCCCHHHHh-h-cceEEeC-----------CCHHHHHHHHHHHHh-Ch
Confidence 232 1 2266 99999999998 33333333233 2 5554433 689999999999997 54
Q ss_pred HHHHH
Q 039408 428 EVRKK 432 (456)
Q Consensus 428 ~~r~~ 432 (456)
...++
T Consensus 320 ~~~~~ 324 (346)
T PF02350_consen 320 DFYRK 324 (346)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44433
No 143
>PRK05595 replicative DNA helicase; Provisional
Probab=43.00 E-value=1.6e+02 Score=30.07 Aligned_cols=35 Identities=11% Similarity=0.347 Sum_probs=29.9
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHH-cCCCceEEEEEEcC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLT-NRDRRFCATVLIMT 42 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~-~rGH~~~Vt~~t~~ 42 (456)
+++..-|+.|=..-.+.+|..++ +.|+. |.|++.+
T Consensus 204 iviaarpg~GKT~~al~ia~~~a~~~g~~--vl~fSlE 239 (444)
T PRK05595 204 ILIAARPSMGKTTFALNIAEYAALREGKS--VAIFSLE 239 (444)
T ss_pred EEEEecCCCChHHHHHHHHHHHHHHcCCc--EEEEecC
Confidence 66788899999999999999876 56866 9999876
No 144
>PRK08506 replicative DNA helicase; Provisional
Probab=42.88 E-value=2.2e+02 Score=29.34 Aligned_cols=36 Identities=17% Similarity=0.373 Sum_probs=31.8
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTV 43 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~ 43 (456)
+++..-|+.|=..-.+.+|...+..|+. |.|++.+-
T Consensus 195 ivIaarpg~GKT~fal~ia~~~~~~g~~--V~~fSlEM 230 (472)
T PRK08506 195 IIIAARPSMGKTTLCLNMALKALNQDKG--VAFFSLEM 230 (472)
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCc--EEEEeCcC
Confidence 6778889999999999999999988976 99998773
No 145
>PRK00654 glgA glycogen synthase; Provisional
Probab=42.55 E-value=35 Score=35.01 Aligned_cols=37 Identities=11% Similarity=0.122 Sum_probs=26.0
Q ss_pred EEEEEcCC------CCcCHHHHHHHHHHHHcCCCceEEEEEEcCC
Q 039408 5 RVVLICTP------EMGNLVPLVEFAHLLTNRDRRFCATVLIMTV 43 (456)
Q Consensus 5 ~il~~~~~------~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~ 43 (456)
||+++++- .-|.-.-.-.|+++|+++||+ |+++++..
T Consensus 2 ~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~--V~v~~p~y 44 (466)
T PRK00654 2 KILFVASECAPLIKTGGLGDVVGALPKALAALGHD--VRVLLPGY 44 (466)
T ss_pred eEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCc--EEEEecCC
Confidence 36665533 223335557899999999988 99998753
No 146
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=42.43 E-value=31 Score=28.31 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=28.7
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
||++.-.++.+=.. ...+.++|.++||+ |.++.++
T Consensus 2 ~i~l~vtGs~~~~~-~~~~l~~L~~~g~~--v~vv~S~ 36 (129)
T PF02441_consen 2 RILLGVTGSIAAYK-APDLLRRLKRAGWE--VRVVLSP 36 (129)
T ss_dssp EEEEEE-SSGGGGG-HHHHHHHHHTTTSE--EEEEESH
T ss_pred EEEEEEECHHHHHH-HHHHHHHHhhCCCE--EEEEECC
Confidence 58888888877777 99999999999987 8887765
No 147
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=41.03 E-value=44 Score=26.66 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=31.9
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEc
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIM 41 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~ 41 (456)
|+++...+..-|-.-+.-|+..|.++||+ |.++-.
T Consensus 2 ~v~~~~~~~~~~~lGl~~la~~l~~~G~~--v~~~d~ 36 (121)
T PF02310_consen 2 RVVLACVPGEVHPLGLLYLAAYLRKAGHE--VDILDA 36 (121)
T ss_dssp EEEEEEBTTSSTSHHHHHHHHHHHHTTBE--EEEEES
T ss_pred EEEEEeeCCcchhHHHHHHHHHHHHCCCe--EEEECC
Confidence 68999999999999999999999999977 888854
No 148
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=40.56 E-value=39 Score=33.21 Aligned_cols=29 Identities=10% Similarity=-0.002 Sum_probs=23.2
Q ss_pred CCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 12 PEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 12 ~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
..-|=-.=...|++.|.+.||+ |+|++..
T Consensus 10 ~~GGv~~~~~~l~~~l~~~g~~--v~~~~~~ 38 (372)
T cd03792 10 YGGGVAEILHSLVPLMRDLGVD--TRWEVIK 38 (372)
T ss_pred CCCcHHHHHHHHHHHHHHcCCC--ceEEecC
Confidence 4556667777999999999998 8888753
No 149
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=40.52 E-value=2.7e+02 Score=24.80 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=31.3
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEE
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLI 40 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t 40 (456)
++..|.++...+.|-..-.+.+|.+.+.+|++ |.++-
T Consensus 21 ~~g~v~v~~g~GkGKtt~a~g~a~ra~g~G~~--V~ivQ 57 (191)
T PRK05986 21 EKGLLIVHTGNGKGKSTAAFGMALRAVGHGKK--VGVVQ 57 (191)
T ss_pred cCCeEEEECCCCCChHHHHHHHHHHHHHCCCe--EEEEE
Confidence 44579999999999999999999999999977 65553
No 150
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=40.48 E-value=77 Score=31.47 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=23.6
Q ss_pred cCC-CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 10 CTP-EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 10 ~~~-~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+| -.|+-.=..+++++|+++ |+ |++++..
T Consensus 9 P~P~~~G~~~r~~~~~~~L~~~-~~--v~l~~~~ 39 (397)
T TIGR03087 9 PYPPNKGDKIRSFHLLRHLAAR-HR--VHLGTFV 39 (397)
T ss_pred CCCCCCCCcEeHHHHHHHHHhc-Cc--EEEEEeC
Confidence 444 568888899999999876 77 8888854
No 151
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=39.63 E-value=48 Score=27.86 Aligned_cols=38 Identities=18% Similarity=-0.000 Sum_probs=32.7
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEE
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLI 40 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t 40 (456)
|+++||++.+.+.-||=.=---+++.|+..| ++|....
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~G--feVi~~g 47 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAG--FEVINLG 47 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCC--ceEEecC
Confidence 4688999999999999999999999999999 5576654
No 152
>PLN02949 transferase, transferring glycosyl groups
Probab=39.28 E-value=4.4e+02 Score=27.01 Aligned_cols=130 Identities=11% Similarity=-0.031 Sum_probs=63.9
Q ss_pred EEEEcCCCCc----CHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeC-CCCCCCC
Q 039408 6 VVLICTPEMG----NLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYL-PSVDPPS 80 (456)
Q Consensus 6 il~~~~~~~G----H~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l-~~~~~~~ 80 (456)
.+.|-.|.-| ==.-++..+.+|.++||+++|++.|++..... ..........-.......+.|+.+ ...+.+.
T Consensus 35 ~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~--~~~l~~~~~~~~i~~~~~~~~v~l~~~~~~~~ 112 (463)
T PLN02949 35 AVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASP--DSLAARARDRFGVELLSPPKVVHLRKRKWIEE 112 (463)
T ss_pred EEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCH--HHHHHHHHhhcceecCCCceEEEecccccccc
Confidence 4444455443 33889999999999999777999996522211 121111110000011223455555 2222222
Q ss_pred CCCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCC-ccHHHHHHHhCCCeEEEeccc
Q 039408 81 PDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFC-TSMTDVANQLGIPCYLYFASP 152 (456)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 152 (456)
..- . .+..+... ...+.-.++.+.+ ..| .|+.|... ..+..+++-+++|.+.+.-.|
T Consensus 113 ~~~----~-~~t~~~~~-~~~~~l~~~~~~~--------~~p-~v~vDt~~~~~~~pl~~~~~~~v~~yvH~p 170 (463)
T PLN02949 113 ETY----P-RFTMIGQS-LGSVYLAWEALCK--------FTP-LYFFDTSGYAFTYPLARLFGCKVVCYTHYP 170 (463)
T ss_pred ccC----C-ceehHHHH-HHHHHHHHHHHHh--------cCC-CEEEeCCCcccHHHHHHhcCCcEEEEEeCC
Confidence 110 0 01111111 1222233344432 134 58888876 345677886699998875444
No 153
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=38.46 E-value=2.4e+02 Score=28.57 Aligned_cols=41 Identities=7% Similarity=0.178 Sum_probs=33.2
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCCh
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERP 47 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~ 47 (456)
-|+++=.-+.|-..-.-.||+.|.++|+. |-+++.+.-+.+
T Consensus 102 vImmvGLQGsGKTTt~~KLA~~lkk~~~k--vllVaaD~~RpA 142 (451)
T COG0541 102 VILMVGLQGSGKTTTAGKLAKYLKKKGKK--VLLVAADTYRPA 142 (451)
T ss_pred EEEEEeccCCChHhHHHHHHHHHHHcCCc--eEEEecccCChH
Confidence 46777777999999999999999999966 989888643333
No 154
>PRK10867 signal recognition particle protein; Provisional
Probab=38.32 E-value=2.2e+02 Score=28.89 Aligned_cols=37 Identities=11% Similarity=0.266 Sum_probs=32.0
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcC-CCceEEEEEEcCC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNR-DRRFCATVLIMTV 43 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~r-GH~~~Vt~~t~~~ 43 (456)
-|+++-.++.|-..=...||..|+.+ |+. |.+++.+.
T Consensus 102 vI~~vG~~GsGKTTtaakLA~~l~~~~G~k--V~lV~~D~ 139 (433)
T PRK10867 102 VIMMVGLQGAGKTTTAGKLAKYLKKKKKKK--VLLVAADV 139 (433)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHhcCCc--EEEEEccc
Confidence 46777788999999999999999999 966 99998863
No 155
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=37.74 E-value=1.7e+02 Score=29.51 Aligned_cols=36 Identities=14% Similarity=0.295 Sum_probs=31.1
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHH-cCCCceEEEEEEcCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLT-NRDRRFCATVLIMTV 43 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~-~rGH~~~Vt~~t~~~ 43 (456)
+++...|+.|=..-.+.+|..++ +.|+. |.|++.+-
T Consensus 197 iviag~pg~GKT~~al~ia~~~a~~~g~~--v~~fSlEm 233 (421)
T TIGR03600 197 IVIGARPSMGKTTLALNIAENVALREGKP--VLFFSLEM 233 (421)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCc--EEEEECCC
Confidence 67788899999999999998887 67866 99998763
No 156
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=37.69 E-value=59 Score=29.45 Aligned_cols=40 Identities=20% Similarity=0.099 Sum_probs=35.4
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVP 44 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~ 44 (456)
+.++++.+.++-.|-....-++..|..+|.+ |+++....|
T Consensus 88 ~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~--Vi~LG~~vp 127 (213)
T cd02069 88 KGKIVLATVKGDVHDIGKNLVGVILSNNGYE--VIDLGVMVP 127 (213)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCCE--EEECCCCCC
Confidence 4589999999999999999999999999955 999987654
No 157
>PRK06321 replicative DNA helicase; Provisional
Probab=37.64 E-value=1.2e+02 Score=31.29 Aligned_cols=36 Identities=14% Similarity=0.263 Sum_probs=30.2
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHc-CCCceEEEEEEcCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTN-RDRRFCATVLIMTV 43 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~-rGH~~~Vt~~t~~~ 43 (456)
+++..-|+.|=..-.+.+|...+. .|+. |.|++-+-
T Consensus 229 iiiaarPgmGKTafal~ia~~~a~~~g~~--v~~fSLEM 265 (472)
T PRK06321 229 MILAARPAMGKTALALNIAENFCFQNRLP--VGIFSLEM 265 (472)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhcCCe--EEEEeccC
Confidence 677888999999999999999884 5755 98998763
No 158
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=36.41 E-value=47 Score=29.15 Aligned_cols=26 Identities=23% Similarity=0.318 Sum_probs=23.5
Q ss_pred CCcCHHHHHHHHHHHHcCCCceEEEEEE
Q 039408 13 EMGNLVPLVEFAHLLTNRDRRFCATVLI 40 (456)
Q Consensus 13 ~~GH~~P~l~La~~L~~rGH~~~Vt~~t 40 (456)
..|+-..+..|++.|.++||+ |++++
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~--v~v~~ 37 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHE--VEVVA 37 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCe--EEEEE
Confidence 679999999999999999988 88775
No 159
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=36.08 E-value=3.3e+02 Score=24.63 Aligned_cols=37 Identities=11% Similarity=0.343 Sum_probs=31.5
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcC-CCceEEEEEEcCCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNR-DRRFCATVLIMTVP 44 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~r-GH~~~Vt~~t~~~~ 44 (456)
+++...|+.|=..-.+.++..++.+ |+. |.|++.+.+
T Consensus 16 ~lI~G~~G~GKT~~~~~~~~~~~~~~g~~--vly~s~E~~ 53 (242)
T cd00984 16 IIIAARPSMGKTAFALNIAENIAKKQGKP--VLFFSLEMS 53 (242)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCc--eEEEeCCCC
Confidence 5677788999999999999999987 876 999998743
No 160
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=35.43 E-value=42 Score=34.87 Aligned_cols=65 Identities=8% Similarity=0.077 Sum_probs=39.1
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccc-hHHHHHHHHHhcCCCh---HHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVS-AEEIEWGLRRLMDGDD---EVRKKVKEM 436 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~-~~~l~~ai~~vl~~~~---~~r~~A~~l 436 (456)
|+++|+|+|+.-.. ..+...+.+. ..|..++.....+ ..-+ .++++++|.+++. ++ .+.++|.+.
T Consensus 412 Ama~G~PVI~~dv~---~G~~eiI~~g-~nG~lv~~~~~~~---d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~ 480 (500)
T TIGR02918 412 AVGSGLGMIGFDVN---YGNPTFIEDN-KNGYLIPIDEEED---DEDQIITALAEKIVEYFN-SNDIDAFHEYSYQI 480 (500)
T ss_pred HHHhCCCEEEecCC---CCCHHHccCC-CCEEEEeCCcccc---chhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHH
Confidence 99999999986543 1244455554 5677776311000 0112 7889999999996 43 444555443
No 161
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=34.13 E-value=2.7e+02 Score=24.71 Aligned_cols=37 Identities=11% Similarity=0.272 Sum_probs=30.5
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVP 44 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~ 44 (456)
|+++=..+.|-..=...||..+..+|+. |.+++.+..
T Consensus 4 i~lvGptGvGKTTt~aKLAa~~~~~~~~--v~lis~D~~ 40 (196)
T PF00448_consen 4 IALVGPTGVGKTTTIAKLAARLKLKGKK--VALISADTY 40 (196)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTT----EEEEEESTS
T ss_pred EEEECCCCCchHhHHHHHHHHHhhcccc--ceeecCCCC
Confidence 6677777999999999999999999866 999998743
No 162
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=34.10 E-value=73 Score=26.13 Aligned_cols=37 Identities=11% Similarity=0.366 Sum_probs=27.2
Q ss_pred eEEEEeccCCcCCCHHHHHHHHHHHHhc--CCeEEEEEe
Q 039408 292 SVVFLCFGSMGSFVGPQLREIAIGLQRV--GFRFLWSIR 328 (456)
Q Consensus 292 ~vVyvsfGS~~~~~~~~~~~l~~al~~~--~~~~vw~~~ 328 (456)
.++.++|||......+.+..+.+.+++. +.++-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 5899999998765556678888888653 456777764
No 163
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=33.93 E-value=53 Score=29.35 Aligned_cols=39 Identities=13% Similarity=0.008 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+..||++.-.++.|=+.=...|+++|.++||+ |.++.++
T Consensus 4 ~~k~IllgVTGsiaa~k~a~~lir~L~k~G~~--V~vv~T~ 42 (196)
T PRK08305 4 KGKRIGFGLTGSHCTYDEVMPEIEKLVDEGAE--VTPIVSY 42 (196)
T ss_pred CCCEEEEEEcCHHHHHHHHHHHHHHHHhCcCE--EEEEECH
Confidence 34467766666544433369999999999987 8777765
No 164
>PRK08006 replicative DNA helicase; Provisional
Probab=33.43 E-value=3.2e+02 Score=28.11 Aligned_cols=36 Identities=11% Similarity=0.315 Sum_probs=30.3
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHH-cCCCceEEEEEEcCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLT-NRDRRFCATVLIMTV 43 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~-~rGH~~~Vt~~t~~~ 43 (456)
+++..-|+.|-..-.+.+|...+ +.|+. |.|++.+-
T Consensus 227 iiIaarPgmGKTafalnia~~~a~~~g~~--V~~fSlEM 263 (471)
T PRK08006 227 IIVAARPSMGKTTFAMNLCENAAMLQDKP--VLIFSLEM 263 (471)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhcCCe--EEEEeccC
Confidence 67788899999999999999988 45765 98998763
No 165
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=33.35 E-value=3.7e+02 Score=25.09 Aligned_cols=20 Identities=15% Similarity=0.265 Sum_probs=15.7
Q ss_pred HHHHHHHHHcCCCceEEEEEEcC
Q 039408 20 LVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+.+|+++|.+ +|+ |+++.+.
T Consensus 16 i~aL~~~l~~-~~~--V~VvAP~ 35 (253)
T PRK13935 16 IIILAEYLSE-KHE--VFVVAPD 35 (253)
T ss_pred HHHHHHHHHh-CCc--EEEEccC
Confidence 6678888865 567 9999876
No 166
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=33.24 E-value=83 Score=27.18 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=23.2
Q ss_pred CCCeEEEEeccCCcCCCHHHHHHHHHHHHhc
Q 039408 289 PPSSVVFLCFGSMGSFVGPQLREIAIGLQRV 319 (456)
Q Consensus 289 ~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~ 319 (456)
+.+-.+|+++||......+.++.....|...
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 3445789999998766667777777777764
No 167
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=33.16 E-value=2.6e+02 Score=22.51 Aligned_cols=38 Identities=11% Similarity=-0.039 Sum_probs=33.5
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVP 44 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~ 44 (456)
|+++.+.++-.|-.-..-++..|...|++ |.++....+
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G~~--vi~lG~~vp 38 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAGFE--VIYTGLRQT 38 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCCCE--EEECCCCCC
Confidence 58999999999999999999999999955 999886544
No 168
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=32.77 E-value=3.8e+02 Score=25.10 Aligned_cols=36 Identities=14% Similarity=0.090 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
++||++.-==+. |---+..|+++|.+.| + |+++.+.
T Consensus 5 ~M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~--V~VvAP~ 40 (257)
T PRK13932 5 KPHILVCNDDGI-EGEGIHVLAASMKKIG-R--VTVVAPA 40 (257)
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhCC-C--EEEEcCC
Confidence 456665542211 1134678899998887 6 8888876
No 169
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=32.53 E-value=62 Score=33.15 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=26.0
Q ss_pred EEEEEcCC------CCcCHHHHHHHHHHHHcCCCceEEEEEEcCC
Q 039408 5 RVVLICTP------EMGNLVPLVEFAHLLTNRDRRFCATVLIMTV 43 (456)
Q Consensus 5 ~il~~~~~------~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~ 43 (456)
||+++++- .-|=-.-.-.|+++|+++||+ |.++++..
T Consensus 2 ~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~--v~v~~p~y 44 (473)
T TIGR02095 2 RVLFVAAEMAPFAKTGGLADVVGALPKALAALGHD--VRVLLPAY 44 (473)
T ss_pred eEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCe--EEEEecCC
Confidence 46776643 222234457899999999998 99998753
No 170
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=32.34 E-value=4.1e+02 Score=24.61 Aligned_cols=21 Identities=14% Similarity=0.121 Sum_probs=17.2
Q ss_pred HHHHHHHHHHcCCCceEEEEEEcC
Q 039408 19 PLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 19 P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
-+..|+++|.+.| + |+++.+.
T Consensus 15 Gi~aL~~~l~~~g-~--V~VvAP~ 35 (244)
T TIGR00087 15 GIRALYQALKELG-E--VTVVAPA 35 (244)
T ss_pred hHHHHHHHHHhCC-C--EEEEeCC
Confidence 3568899999988 7 9999876
No 171
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=31.93 E-value=3.3e+02 Score=27.63 Aligned_cols=36 Identities=6% Similarity=0.135 Sum_probs=31.9
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
-|+++-.++.|-..-...||..|.++|++ |.+++.+
T Consensus 102 vi~lvG~~GvGKTTtaaKLA~~l~~~G~k--V~lV~~D 137 (429)
T TIGR01425 102 VIMFVGLQGSGKTTTCTKLAYYYQRKGFK--PCLVCAD 137 (429)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCC--EEEEcCc
Confidence 46777788999999999999999999976 9999886
No 172
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=31.66 E-value=66 Score=35.30 Aligned_cols=29 Identities=10% Similarity=0.016 Sum_probs=22.4
Q ss_pred CCeeEEEEcCCCc--cHHHHHHHhCCCeEEE
Q 039408 120 DRVAGLFIDMFCT--SMTDVANQLGIPCYLY 148 (456)
Q Consensus 120 ~~~d~vI~D~~~~--~~~~~A~~lgiP~v~~ 148 (456)
.+||+|++..... .+..+|+++|||.+..
T Consensus 384 ~~pDlIHahy~d~glva~lla~~lgVP~v~t 414 (784)
T TIGR02470 384 GKPDLIIGNYSDGNLVASLLARKLGVTQCTI 414 (784)
T ss_pred CCCCEEEECCCchHHHHHHHHHhcCCCEEEE
Confidence 4799999877443 2578899999997654
No 173
>PRK14099 glycogen synthase; Provisional
Probab=31.57 E-value=90 Score=32.26 Aligned_cols=41 Identities=15% Similarity=0.090 Sum_probs=30.0
Q ss_pred CCCcEEEEEcCCC------CcCHHHHHHHHHHHHcCCCceEEEEEEcCC
Q 039408 1 MKKFRVVLICTPE------MGNLVPLVEFAHLLTNRDRRFCATVLIMTV 43 (456)
Q Consensus 1 m~~~~il~~~~~~------~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~ 43 (456)
|+++||++++.=. -|=-.-.-.|.++|+++||+ |.++.+..
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~--v~v~~P~y 47 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVE--VRTLVPGY 47 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCc--EEEEeCCC
Confidence 8888999886421 22224466899999999998 88888753
No 174
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=30.91 E-value=1.5e+02 Score=25.67 Aligned_cols=37 Identities=11% Similarity=0.315 Sum_probs=31.0
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEE-EEEcC
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCAT-VLIMT 42 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt-~~t~~ 42 (456)
++|.+.-.|+.|-..-.+.++..|..+| ++|- |+|++
T Consensus 6 mki~ITG~PGvGKtTl~~ki~e~L~~~g--~kvgGf~t~E 43 (179)
T COG1618 6 MKIFITGRPGVGKTTLVLKIAEKLREKG--YKVGGFITPE 43 (179)
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHhcC--ceeeeEEeee
Confidence 4799999999999999999999999999 4464 44543
No 175
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=30.90 E-value=3.4e+02 Score=23.18 Aligned_cols=77 Identities=18% Similarity=0.230 Sum_probs=41.3
Q ss_pred EEeeCcceeccccccccchhHH---HHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAF---ELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKS 440 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~---~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~ 440 (456)
|-..=+|.|++|+-..-..--. -++.- =-|+.+.+-.- + +..+..-++..|-. +. |+++++|.+++++..
T Consensus 76 Aa~T~lPViGVPv~s~~L~GlDSL~SiVQM-P~GvPVaTvaI-g---~a~NAallAa~ILa-~~-d~~l~~kl~~~r~~~ 148 (162)
T COG0041 76 AAKTPLPVIGVPVQSKALSGLDSLLSIVQM-PAGVPVATVAI-G---NAANAALLAAQILA-IK-DPELAEKLAEFREAQ 148 (162)
T ss_pred hhcCCCCeEeccCccccccchHHHHHHhcC-CCCCeeEEEee-c---chhhHHHHHHHHHc-CC-CHHHHHHHHHHHHHH
Confidence 4444688888887643322111 12221 23443332100 0 23445555555533 33 789999999999998
Q ss_pred HHhhccC
Q 039408 441 RTAVMEE 447 (456)
Q Consensus 441 ~~a~~~g 447 (456)
++.+.+.
T Consensus 149 ~~~V~~~ 155 (162)
T COG0041 149 TEEVLED 155 (162)
T ss_pred HHHHHhC
Confidence 8877543
No 176
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=30.89 E-value=77 Score=29.59 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=31.5
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
-++++=.|+.|=..=..++|++|.++|+. |+|++.+
T Consensus 107 nl~l~G~~G~GKThLa~Ai~~~l~~~g~s--v~f~~~~ 142 (254)
T COG1484 107 NLVLLGPPGVGKTHLAIAIGNELLKAGIS--VLFITAP 142 (254)
T ss_pred cEEEECCCCCcHHHHHHHHHHHHHHcCCe--EEEEEHH
Confidence 47788888999999999999999999966 9999976
No 177
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=30.51 E-value=1.1e+02 Score=29.98 Aligned_cols=29 Identities=17% Similarity=0.161 Sum_probs=22.6
Q ss_pred CCeeEEEEcCCCcc----------HHHHHHHhCCCeEEE
Q 039408 120 DRVAGLFIDMFCTS----------MTDVANQLGIPCYLY 148 (456)
Q Consensus 120 ~~~d~vI~D~~~~~----------~~~~A~~lgiP~v~~ 148 (456)
.+||++|+-+.+-. +..+.++++||.++-
T Consensus 79 ~~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vta 117 (349)
T PF07355_consen 79 LKPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTA 117 (349)
T ss_pred cCCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEE
Confidence 58999999997664 234668999998864
No 178
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=30.49 E-value=91 Score=23.10 Aligned_cols=28 Identities=18% Similarity=0.114 Sum_probs=25.9
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDR 32 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH 32 (456)
-++++..+...|..=+-+||+.|+++|.
T Consensus 17 ~~v~i~HG~~eh~~ry~~~a~~L~~~G~ 44 (79)
T PF12146_consen 17 AVVVIVHGFGEHSGRYAHLAEFLAEQGY 44 (79)
T ss_pred EEEEEeCCcHHHHHHHHHHHHHHHhCCC
Confidence 4889999999999999999999999994
No 179
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=30.36 E-value=53 Score=28.93 Aligned_cols=37 Identities=24% Similarity=0.395 Sum_probs=28.9
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
||+ |++.-.++.|=+. ...+.+.|.++|++ |.++.++
T Consensus 1 ~k~--Ill~vtGsiaa~~-~~~li~~L~~~g~~--V~vv~T~ 37 (182)
T PRK07313 1 MKN--ILLAVSGSIAAYK-AADLTSQLTKRGYQ--VTVLMTK 37 (182)
T ss_pred CCE--EEEEEeChHHHHH-HHHHHHHHHHCCCE--EEEEECh
Confidence 555 7777777766665 89999999999977 7777765
No 180
>PRK06904 replicative DNA helicase; Validated
Probab=29.95 E-value=2.2e+02 Score=29.32 Aligned_cols=36 Identities=11% Similarity=0.291 Sum_probs=30.3
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHc-CCCceEEEEEEcCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTN-RDRRFCATVLIMTV 43 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~-rGH~~~Vt~~t~~~ 43 (456)
+++..-|+.|-..-.+.+|...+. .|+. |.|++.+-
T Consensus 224 iiIaarPg~GKTafalnia~~~a~~~g~~--Vl~fSlEM 260 (472)
T PRK06904 224 IIVAARPSMGKTTFAMNLCENAAMASEKP--VLVFSLEM 260 (472)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhcCCe--EEEEeccC
Confidence 677888999999999999998875 5865 98998763
No 181
>PHA01630 putative group 1 glycosyl transferase
Probab=29.88 E-value=30 Score=33.69 Aligned_cols=14 Identities=14% Similarity=0.057 Sum_probs=12.1
Q ss_pred EEeeCcceeccccc
Q 039408 364 SLWYGVPIATWPLY 377 (456)
Q Consensus 364 al~~GVP~v~~P~~ 377 (456)
|+++|+|.|+.-..
T Consensus 229 AMA~G~PVIas~~g 242 (331)
T PHA01630 229 ALALGLDVVVTEKG 242 (331)
T ss_pred HHHcCCCEEEeCCC
Confidence 99999999997654
No 182
>TIGR00665 DnaB replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites.
Probab=28.92 E-value=4.5e+02 Score=26.54 Aligned_cols=37 Identities=14% Similarity=0.282 Sum_probs=31.1
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHc-CCCceEEEEEEcCCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTN-RDRRFCATVLIMTVP 44 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~-rGH~~~Vt~~t~~~~ 44 (456)
+++...|+.|=..-.+.+|..++. .|+. |.|++.+-+
T Consensus 198 ~vi~g~pg~GKT~~~l~~a~~~a~~~g~~--vl~~SlEm~ 235 (434)
T TIGR00665 198 IILAARPSMGKTAFALNIAENAAIKEGKP--VAFFSLEMS 235 (434)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhCCCe--EEEEeCcCC
Confidence 677888999999999999999886 5865 999987743
No 183
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=28.66 E-value=3.6e+02 Score=25.13 Aligned_cols=20 Identities=20% Similarity=0.212 Sum_probs=16.4
Q ss_pred HHHHHHHHHcCCCceEEEEEEcC
Q 039408 20 LVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+-.|+++|. .+++ |+++.++
T Consensus 16 i~aL~~al~-~~~d--V~VVAP~ 35 (252)
T COG0496 16 IRALARALR-EGAD--VTVVAPD 35 (252)
T ss_pred HHHHHHHHh-hCCC--EEEEccC
Confidence 557888888 8878 9999987
No 184
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=28.54 E-value=5.8e+02 Score=25.10 Aligned_cols=115 Identities=17% Similarity=0.260 Sum_probs=62.4
Q ss_pred CeEEEEeccCCc---CCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCcc-------CCCCccccccccccCch-h---HHh
Q 039408 291 SSVVFLCFGSMG---SFVGPQLREIAIGLQRVGFRFLWSIREPSKSKI-------YLPGEYTNLKVKEMLPE-G---FLN 356 (456)
Q Consensus 291 ~~vVyvsfGS~~---~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~-------~~~~~~~n~~~~~~lP~-~---f~~ 356 (456)
++.++|++=... ....+.+.+++++|...+.++++.+....++.. .+-...+|+.+.+-++. + ++.
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~ 280 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLK 280 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHH
Confidence 467888885542 345677899999998887666666543211100 00000234544443332 1 222
Q ss_pred hc-----CC-cee--EEeeCcceeccccccccchhHHHHHHhhcceEE-ecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 357 RT-----AG-VGL--SLWYGVPIATWPLYAEQQMNAFELVKELRLAVE-IRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 357 ~~-----g~-~G~--al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~-l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
+. .. +|+ |.+.|+|.|.+- +-+ ...+. |..+. +. .+.++|.++++++++
T Consensus 281 ~a~~vitdSSggi~EA~~lg~Pvv~l~---~R~----e~~~~-g~nvl~vg-----------~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 281 NADAVIGNSSSGIIEAPSFGVPTINIG---TRQ----KGRLR-ADSVIDVD-----------PDKEEIVKAIEKLLD 338 (365)
T ss_pred hCCEEEEcChhHHHhhhhcCCCEEeec---CCc----hhhhh-cCeEEEeC-----------CCHHHHHHHHHHHhC
Confidence 22 12 344 999999999763 211 12222 43322 22 578999999999554
No 185
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=28.44 E-value=5e+02 Score=24.39 Aligned_cols=36 Identities=8% Similarity=0.222 Sum_probs=31.6
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
-|+++..++.|-..=...||..|+++|+. |.+++.+
T Consensus 74 vi~l~G~~G~GKTTt~akLA~~l~~~g~~--V~li~~D 109 (272)
T TIGR00064 74 VILFVGVNGVGKTTTIAKLANKLKKQGKS--VLLAAGD 109 (272)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHhcCCE--EEEEeCC
Confidence 46777888999999999999999999966 9999876
No 186
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=28.27 E-value=5e+02 Score=24.25 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=16.1
Q ss_pred HHHHHHHHHcCCCceEEEEEEcC
Q 039408 20 LVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+..|+++|.+ +|+ |+++.+.
T Consensus 16 l~aL~~~l~~-~~~--V~VvAP~ 35 (253)
T PRK13933 16 INTLAELLSK-YHE--VIIVAPE 35 (253)
T ss_pred HHHHHHHHHh-CCc--EEEEccC
Confidence 7788899875 567 9999876
No 187
>PLN00142 sucrose synthase
Probab=28.14 E-value=81 Score=34.73 Aligned_cols=30 Identities=10% Similarity=0.000 Sum_probs=23.5
Q ss_pred CCeeEEEEcCCCc--cHHHHHHHhCCCeEEEe
Q 039408 120 DRVAGLFIDMFCT--SMTDVANQLGIPCYLYF 149 (456)
Q Consensus 120 ~~~d~vI~D~~~~--~~~~~A~~lgiP~v~~~ 149 (456)
.+||+|..+.... .+..+|+++|||.+...
T Consensus 407 ~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~ 438 (815)
T PLN00142 407 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIA 438 (815)
T ss_pred CCCCEEEECCccHHHHHHHHHHHhCCCEEEEc
Confidence 4799999886544 35788999999988753
No 188
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=28.00 E-value=89 Score=27.13 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=25.0
Q ss_pred HHHHHHhhcCCCCCCCCeeEEEEcCCCcc--HHHHHHHhCCCeEEEe
Q 039408 105 EITNLIETESDSEDSDRVAGLFIDMFCTS--MTDVANQLGIPCYLYF 149 (456)
Q Consensus 105 ~l~~l~~~~~~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~v~~~ 149 (456)
-++.+++ -+||+||....... ....-++.|||.+.+.
T Consensus 61 n~E~ll~--------l~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 61 NVELIVA--------LKPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CHHHHhc--------cCCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 3566665 38999998654332 3455578999988774
No 189
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.80 E-value=3.6e+02 Score=26.97 Aligned_cols=39 Identities=5% Similarity=0.074 Sum_probs=31.6
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPE 45 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~ 45 (456)
-|+|+-.-+.|-..-.-.||..+.++|. ++.++..++-+
T Consensus 103 VimfVGLqG~GKTTtc~KlA~y~kkkG~--K~~LvcaDTFR 141 (483)
T KOG0780|consen 103 VIMFVGLQGSGKTTTCTKLAYYYKKKGY--KVALVCADTFR 141 (483)
T ss_pred EEEEEeccCCCcceeHHHHHHHHHhcCC--ceeEEeecccc
Confidence 3666667789999999999999999994 58888876443
No 190
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=27.73 E-value=3.9e+02 Score=26.02 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=23.5
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEc
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIM 41 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~ 41 (456)
|+ +-.+++-|+.=+-.|.++|.++.. +.+.++.+
T Consensus 3 i~-~~~gtr~~~~~~~p~~~~l~~~~~-~~~~~~~t 36 (365)
T TIGR00236 3 VS-IVLGTRPEAIKMAPLIRALKKYPE-IDSYVIVT 36 (365)
T ss_pred EE-EEEecCHHHHHHHHHHHHHhhCCC-CCEEEEEe
Confidence 44 455888899999999999998732 33444443
No 191
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=27.53 E-value=3.9e+02 Score=27.11 Aligned_cols=36 Identities=8% Similarity=0.192 Sum_probs=30.9
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHH-cCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLT-NRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~-~rGH~~~Vt~~t~~ 42 (456)
-++++-.++.|-..-...||..|. ++|.+ |.+++.+
T Consensus 101 vi~~vG~~GsGKTTtaakLA~~l~~~~g~k--V~lV~~D 137 (428)
T TIGR00959 101 VILMVGLQGSGKTTTCGKLAYYLKKKQGKK--VLLVACD 137 (428)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHhCCCe--EEEEecc
Confidence 467778889999999999999997 68866 9999876
No 192
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=27.49 E-value=71 Score=29.98 Aligned_cols=38 Identities=24% Similarity=0.236 Sum_probs=34.9
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+|+++-..+.|++.=+..+.++|.++.++.+|++++.+
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~ 38 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPP 38 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEECh
Confidence 48999999999999999999999999877889999976
No 193
>PLN02275 transferase, transferring glycosyl groups
Probab=26.98 E-value=43 Score=33.03 Aligned_cols=43 Identities=14% Similarity=0.133 Sum_probs=31.9
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhc
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLM 423 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl 423 (456)
|+++|+|+|+... ..+...+.+. +.|+.++ +.++++++|.++|
T Consensus 329 AmA~G~PVVa~~~----gg~~eiv~~g-~~G~lv~------------~~~~la~~i~~l~ 371 (371)
T PLN02275 329 MFGCGLPVCAVSY----SCIGELVKDG-KNGLLFS------------SSSELADQLLELL 371 (371)
T ss_pred HHHCCCCEEEecC----CChHHHccCC-CCeEEEC------------CHHHHHHHHHHhC
Confidence 9999999999753 3366666665 6787654 3688999998865
No 194
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=26.39 E-value=1.3e+02 Score=28.18 Aligned_cols=30 Identities=13% Similarity=-0.056 Sum_probs=23.3
Q ss_pred CeeEEEEcCCCc------cHHHHHHHhCCCeEEEec
Q 039408 121 RVAGLFIDMFCT------SMTDVANQLGIPCYLYFA 150 (456)
Q Consensus 121 ~~d~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 150 (456)
.||+|++-.... -+..+|+.||+|++++..
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 147 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVS 147 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEE
Confidence 599999865443 256899999999998754
No 195
>PRK09620 hypothetical protein; Provisional
Probab=26.20 E-value=90 Score=28.64 Aligned_cols=40 Identities=15% Similarity=0.006 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCCcCHHH------------HHHHHHHHHcCCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTPEMGNLVP------------LVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P------------~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+..+|++..-|+.=.+.| -.+||++|.++||+ |+++...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~--V~li~g~ 52 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAH--VIYLHGY 52 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCe--EEEEeCC
Confidence 3444677665554433332 26899999999977 9998753
No 196
>PRK05636 replicative DNA helicase; Provisional
Probab=26.17 E-value=3.9e+02 Score=27.83 Aligned_cols=35 Identities=9% Similarity=0.349 Sum_probs=28.8
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHc-CCCceEEEEEEcC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTN-RDRRFCATVLIMT 42 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~-rGH~~~Vt~~t~~ 42 (456)
+++..-|+.|-..-.+.+|...+. .|.. |.|++.+
T Consensus 268 iiiaarpg~GKT~~al~~a~~~a~~~g~~--v~~fSlE 303 (505)
T PRK05636 268 IIVAARPGVGKSTLALDFMRSASIKHNKA--SVIFSLE 303 (505)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCe--EEEEEee
Confidence 677888999999999999998774 5644 8888876
No 197
>PRK09165 replicative DNA helicase; Provisional
Probab=25.92 E-value=3e+02 Score=28.55 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=29.3
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcC---------------CCceEEEEEEcC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNR---------------DRRFCATVLIMT 42 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~r---------------GH~~~Vt~~t~~ 42 (456)
+++..-|+.|=..-.+.+|...+.+ |.. |.|++.+
T Consensus 220 ivIaarpg~GKT~~al~ia~~~a~~~~~~~~~~~~~~~~~g~~--vl~fSlE 269 (497)
T PRK09165 220 IILAGRPSMGKTALATNIAFNAAKAYRREAQPDGSKKAVNGGV--VGFFSLE 269 (497)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhhcccccccccccccCCCe--EEEEeCc
Confidence 6778889999999999999988754 644 9899876
No 198
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=25.62 E-value=5.7e+02 Score=25.13 Aligned_cols=30 Identities=17% Similarity=0.005 Sum_probs=21.6
Q ss_pred CCeeEEEEcC--CC-ccHHHHHHHhCCCeEEEe
Q 039408 120 DRVAGLFIDM--FC-TSMTDVANQLGIPCYLYF 149 (456)
Q Consensus 120 ~~~d~vI~D~--~~-~~~~~~A~~lgiP~v~~~ 149 (456)
.+||+||+-- +. ..+..+|..+|||.+.+-
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~Hve 124 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIH 124 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEE
Confidence 4799888644 32 245778899999999653
No 199
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=25.58 E-value=55 Score=34.14 Aligned_cols=43 Identities=14% Similarity=0.157 Sum_probs=33.1
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD 427 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 427 (456)
|+++|+|+| .+.....|... .-|.-+. +.++|.++|..+|. +.
T Consensus 447 AiS~GiPqI-------nyg~~~~V~d~-~NG~li~------------d~~~l~~al~~~L~-~~ 489 (519)
T TIGR03713 447 GISAGIPQI-------NKVETDYVEHN-KNGYIID------------DISELLKALDYYLD-NL 489 (519)
T ss_pred HHHcCCCee-------ecCCceeeEcC-CCcEEeC------------CHHHHHHHHHHHHh-CH
Confidence 999999999 55555666665 6666553 67899999999998 64
No 200
>PRK07004 replicative DNA helicase; Provisional
Probab=25.56 E-value=4.9e+02 Score=26.67 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=30.2
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHc-CCCceEEEEEEcCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTN-RDRRFCATVLIMTV 43 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~-rGH~~~Vt~~t~~~ 43 (456)
+++..-|+.|-..-.+.+|..++. .|+. |.|++.+-
T Consensus 216 iviaarpg~GKT~~al~ia~~~a~~~~~~--v~~fSlEM 252 (460)
T PRK07004 216 IIVAGRPSMGKTAFSMNIGEYVAVEYGLP--VAVFSMEM 252 (460)
T ss_pred EEEEeCCCCCccHHHHHHHHHHHHHcCCe--EEEEeCCC
Confidence 677888999999999999998874 6755 98998763
No 201
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=25.15 E-value=7.2e+02 Score=25.09 Aligned_cols=28 Identities=25% Similarity=0.471 Sum_probs=23.3
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcC--CCc
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNR--DRR 33 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~r--GH~ 33 (456)
.+.+=..+.|-++-.+.|.++|.++ ++.
T Consensus 51 ~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ 80 (419)
T COG1519 51 LVWIHAASVGEVLAALPLVRALRERFPDLR 80 (419)
T ss_pred eEEEEecchhHHHHHHHHHHHHHHhCCCCC
Confidence 4556667889999999999999999 555
No 202
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=25.00 E-value=1e+02 Score=29.46 Aligned_cols=28 Identities=21% Similarity=0.162 Sum_probs=24.3
Q ss_pred CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 13 EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 13 ~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
.-|.-.-...|+++|.+.||+ |++++..
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~--v~v~~~~ 40 (357)
T cd03795 13 RGGIEQVIRDLAEGLAARGIE--VAVLCAS 40 (357)
T ss_pred CCcHHHHHHHHHHHHHhCCCc--eEEEecC
Confidence 567888889999999999988 8888865
No 203
>PRK07773 replicative DNA helicase; Validated
Probab=24.43 E-value=3.6e+02 Score=30.35 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=30.0
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcC-CCceEEEEEEcCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNR-DRRFCATVLIMTV 43 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~r-GH~~~Vt~~t~~~ 43 (456)
+++..-|+.|=..-.+.+|...+.+ |. .|.|++-+-
T Consensus 220 ivIagrPg~GKT~fal~ia~~~a~~~~~--~V~~fSlEm 256 (886)
T PRK07773 220 IIVAARPSMGKTTFGLDFARNCAIRHRL--AVAIFSLEM 256 (886)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHhcCC--eEEEEecCC
Confidence 6778889999999999999998865 54 499998763
No 204
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=24.39 E-value=1.3e+02 Score=28.28 Aligned_cols=38 Identities=8% Similarity=0.236 Sum_probs=23.5
Q ss_pred eEEEEeccCCcCCCHH-HHHHHHHHHHhc--CCeEEEEEeC
Q 039408 292 SVVFLCFGSMGSFVGP-QLREIAIGLQRV--GFRFLWSIRE 329 (456)
Q Consensus 292 ~vVyvsfGS~~~~~~~-~~~~l~~al~~~--~~~~vw~~~~ 329 (456)
.++.|||||......+ .+..+-+.++.. +.++-|++..
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS 42 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTS 42 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchH
Confidence 4789999998765555 566676776663 7888888754
No 205
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=24.27 E-value=1.2e+02 Score=29.56 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=34.6
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
||+++-..+.|++.=...+.+.|.++-++.+|++++.+
T Consensus 2 rILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~ 39 (348)
T PRK10916 2 KILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPA 39 (348)
T ss_pred cEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEech
Confidence 49999999999999999999999998666789999975
No 206
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=24.23 E-value=57 Score=28.22 Aligned_cols=33 Identities=18% Similarity=0.127 Sum_probs=20.2
Q ss_pred cchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC
Q 039408 380 QQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD 426 (456)
Q Consensus 380 Q~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 426 (456)
....+.+=.+. |||+ .+|+|+|+++|.+++.++
T Consensus 101 ~~d~~~Fe~~c-GVGV-------------~VT~E~I~~~V~~~i~~~ 133 (164)
T PF04558_consen 101 PIDVAEFEKAC-GVGV-------------VVTPEQIEAAVEKYIEEN 133 (164)
T ss_dssp G--HHHHHHTT-TTT-----------------HHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHc-CCCe-------------EECHHHHHHHHHHHHHHh
Confidence 34455555554 8887 377899999999999744
No 207
>PRK12342 hypothetical protein; Provisional
Probab=24.01 E-value=1.5e+02 Score=27.66 Aligned_cols=30 Identities=10% Similarity=-0.050 Sum_probs=23.3
Q ss_pred CeeEEEEcCCCcc------HHHHHHHhCCCeEEEec
Q 039408 121 RVAGLFIDMFCTS------MTDVANQLGIPCYLYFA 150 (456)
Q Consensus 121 ~~d~vI~D~~~~~------~~~~A~~lgiP~v~~~~ 150 (456)
.||+|++--...- +..+|+.||+|++++..
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 5999997654432 57899999999998753
No 208
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=23.75 E-value=75 Score=32.02 Aligned_cols=52 Identities=13% Similarity=-0.002 Sum_probs=32.0
Q ss_pred EEeeCcceeccccccccchhHHHHH---HhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELV---KELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRK 431 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~---~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~ 431 (456)
|+++|+|.|+.-..+. ....+. .. ..|.-.. +.++++++|.+++..+++.++
T Consensus 344 AMa~G~pvIa~~~ggp---~~~iv~~~~~g-~~G~l~~------------d~~~la~ai~~ll~~~~~~~~ 398 (419)
T cd03806 344 YMAAGLIPLAHASGGP---LLDIVVPWDGG-PTGFLAS------------TAEEYAEAIEKILSLSEEERL 398 (419)
T ss_pred HHHcCCcEEEEcCCCC---chheeeccCCC-CceEEeC------------CHHHHHHHHHHHHhCCHHHHH
Confidence 9999999987654331 111122 23 4565421 688999999999973334443
No 209
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=23.71 E-value=1.1e+02 Score=29.49 Aligned_cols=24 Identities=25% Similarity=0.171 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 17 LVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 17 ~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
-.=...|+++|.++||+ |++++..
T Consensus 18 ~~~~~~la~~L~~~g~~--v~v~~~~ 41 (363)
T cd04955 18 ETFVEELAPRLVARGHE--VTVYCRS 41 (363)
T ss_pred HHHHHHHHHHHHhcCCC--EEEEEcc
Confidence 35677999999999998 8888864
No 210
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=23.52 E-value=75 Score=26.14 Aligned_cols=27 Identities=19% Similarity=0.151 Sum_probs=19.9
Q ss_pred EEEeccCCcCCCHHHHHHHHHHHHhcC
Q 039408 294 VFLCFGSMGSFVGPQLREIAIGLQRVG 320 (456)
Q Consensus 294 VyvsfGS~~~~~~~~~~~l~~al~~~~ 320 (456)
+|+++||......+.++.....|++..
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~ 27 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALP 27 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCC
Confidence 599999987656666777777776554
No 211
>PRK04940 hypothetical protein; Provisional
Probab=23.42 E-value=1.6e+02 Score=25.97 Aligned_cols=33 Identities=6% Similarity=-0.230 Sum_probs=25.4
Q ss_pred CeeEEEEcC-CCccHHHHHHHhCCCeEEEecccH
Q 039408 121 RVAGLFIDM-FCTSMTDVANQLGIPCYLYFASPA 153 (456)
Q Consensus 121 ~~d~vI~D~-~~~~~~~~A~~lgiP~v~~~~~~~ 153 (456)
++.++|-.. -.+|+.-+|+++|+|+|.+.|+--
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv~ 93 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPNLF 93 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCCCC
Confidence 356676444 577889999999999999977653
No 212
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=23.24 E-value=5.8e+02 Score=25.83 Aligned_cols=36 Identities=14% Similarity=0.294 Sum_probs=32.1
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
.|+++=..+.|-..=...||..|..+|+. |.+++.+
T Consensus 243 vI~LVGptGvGKTTTiaKLA~~L~~~Gkk--VglI~aD 278 (436)
T PRK11889 243 TIALIGPTGVGKTTTLAKMAWQFHGKKKT--VGFITTD 278 (436)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHcCCc--EEEEecC
Confidence 57788888999999999999999999966 9999886
No 213
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=22.57 E-value=65 Score=29.82 Aligned_cols=23 Identities=9% Similarity=0.137 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 18 VPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 18 ~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
.-.-.|+++|+++||+ |+++++.
T Consensus 20 dv~~~L~kaL~~~G~~--V~Vi~P~ 42 (245)
T PF08323_consen 20 DVVGSLPKALAKQGHD--VRVIMPK 42 (245)
T ss_dssp HHHHHHHHHHHHTT-E--EEEEEE-
T ss_pred HHHHHHHHHHHhcCCe--EEEEEcc
Confidence 3456899999999988 9999875
No 214
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=22.50 E-value=1.5e+02 Score=28.04 Aligned_cols=45 Identities=27% Similarity=0.717 Sum_probs=35.2
Q ss_pred chhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCcc-----HHHHHHHhCCCeEEEe
Q 039408 99 KPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTS-----MTDVANQLGIPCYLYF 149 (456)
Q Consensus 99 ~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~-----~~~~A~~lgiP~v~~~ 149 (456)
.+.+++.++.+++. ..++-+||+|.|+-- ..++|.+.+||++.+.
T Consensus 132 ~p~IKE~vR~~I~~------A~kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLL 181 (284)
T PF07894_consen 132 QPHIKEVVRRMIQQ------AQKVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILL 181 (284)
T ss_pred CCCHHHHHHHHHHH------hcceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEe
Confidence 45788888888874 468899999998754 4678889999987764
No 215
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=22.26 E-value=1.8e+02 Score=29.30 Aligned_cols=29 Identities=14% Similarity=0.165 Sum_probs=22.5
Q ss_pred CCeeEEEEcCCCcc----------HHHHHHHhCCCeEEE
Q 039408 120 DRVAGLFIDMFCTS----------MTDVANQLGIPCYLY 148 (456)
Q Consensus 120 ~~~d~vI~D~~~~~----------~~~~A~~lgiP~v~~ 148 (456)
.+||++|+-+.+.. +..+.+++|||.++-
T Consensus 75 ~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vta 113 (431)
T TIGR01917 75 ANPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTA 113 (431)
T ss_pred cCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 58999999997664 234567899998875
No 216
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=22.23 E-value=5.1e+02 Score=22.27 Aligned_cols=112 Identities=16% Similarity=0.182 Sum_probs=58.8
Q ss_pred EEEcCCCCcCHHHHH-HHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCC-----CC
Q 039408 7 VLICTPEMGNLVPLV-EFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDP-----PS 80 (456)
Q Consensus 7 l~~~~~~~GH~~P~l-~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-----~~ 80 (456)
..+.+...+.+.-+| .+|.+|.++|++ |.=+... + .... ......+....+++... .-
T Consensus 2 aav~~~~~~~~d~lL~~~a~~L~~~G~r--v~G~vQ~-~--------~~~~-----~~~~~~m~l~dl~~G~~~~IsQ~L 65 (159)
T PF10649_consen 2 AAVVYDDGGDIDALLAAFAARLRARGVR--VAGLVQR-N--------TADG-----DGGRCDMDLRDLPSGRRIRISQDL 65 (159)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHhCCCe--EEEEecc-c--------cCCC-----CCCccceEEEECCCCCEEEEeecc
Confidence 445566667776555 699999999965 5544432 1 0000 11233566666665420 11
Q ss_pred CCCC----CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCcc---------HHHHHHHhCCCeEE
Q 039408 81 PDQY----KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTS---------MTDVANQLGIPCYL 147 (456)
Q Consensus 81 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~---------~~~~A~~lgiP~v~ 147 (456)
+..+ -++.. +-. -...++..++ .++|++|..-|.-. ....|-..|||.++
T Consensus 66 G~gs~gCrLD~~~----La~-----A~~~l~~al~--------~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt 128 (159)
T PF10649_consen 66 GPGSRGCRLDPGA----LAE-----ASAALRRALA--------EGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLT 128 (159)
T ss_pred CCCCcccccCHHH----HHH-----HHHHHHHHHh--------cCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEE
Confidence 1111 12221 111 1122333333 37999999887542 23446788999887
Q ss_pred Eecc
Q 039408 148 YFAS 151 (456)
Q Consensus 148 ~~~~ 151 (456)
-...
T Consensus 129 ~V~~ 132 (159)
T PF10649_consen 129 AVPP 132 (159)
T ss_pred EECH
Confidence 6443
No 217
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=22.06 E-value=1.8e+02 Score=29.24 Aligned_cols=29 Identities=10% Similarity=0.085 Sum_probs=22.5
Q ss_pred CCeeEEEEcCCCcc----------HHHHHHHhCCCeEEE
Q 039408 120 DRVAGLFIDMFCTS----------MTDVANQLGIPCYLY 148 (456)
Q Consensus 120 ~~~d~vI~D~~~~~----------~~~~A~~lgiP~v~~ 148 (456)
.+||++|+-+.+.+ +..+.+++|||.++-
T Consensus 75 ~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~ 113 (431)
T TIGR01918 75 KEPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTS 113 (431)
T ss_pred cCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 58999999997664 234567899998875
No 218
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=21.88 E-value=1e+02 Score=29.57 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|.+++|+++=.++.| .-+|..|++.||+ |+++.-.
T Consensus 3 ~~~m~I~IiG~GaiG-----~~lA~~L~~~g~~--V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIGTGAIG-----GFYGAMLARAGFD--VHFLLRS 37 (313)
T ss_pred CcCcEEEEECCCHHH-----HHHHHHHHHCCCe--EEEEEeC
Confidence 456789999777777 4578899999988 9998754
No 219
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=21.81 E-value=2.3e+02 Score=24.27 Aligned_cols=24 Identities=17% Similarity=0.080 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHc-CCCceEEEEE
Q 039408 16 NLVPLVEFAHLLTN-RDRRFCATVL 39 (456)
Q Consensus 16 H~~P~l~La~~L~~-rGH~~~Vt~~ 39 (456)
|...--+|+.+|.+ +|++++|.++
T Consensus 1 H~~aA~Al~eal~~~~~~~~~v~v~ 25 (169)
T PF06925_consen 1 HNSAARALAEALERRRGPDAEVEVV 25 (169)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEE
Confidence 77788899999988 6777556544
No 220
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=21.51 E-value=70 Score=32.68 Aligned_cols=50 Identities=16% Similarity=0.122 Sum_probs=31.7
Q ss_pred EEeeCcceecccccc--ccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 364 SLWYGVPIATWPLYA--EQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 364 al~~GVP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
|+++|+|.|+....+ |--.+...-.+. |.|..++. -+.++++++|++++.
T Consensus 390 Ama~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~~----------~~~~~l~~~i~~~l~ 441 (476)
T cd03791 390 AMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFEG----------YNADALLAALRRALA 441 (476)
T ss_pred HhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeCC----------CCHHHHHHHHHHHHH
Confidence 999999999765433 211111100122 47887773 468999999999874
No 221
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=21.34 E-value=93 Score=29.51 Aligned_cols=36 Identities=19% Similarity=0.285 Sum_probs=26.8
Q ss_pred EEEEEcCC--------CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTP--------EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~--------~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+|++++.. .-|--.-...|++.|.++||+ |++++..
T Consensus 2 kI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~--V~v~~~~ 45 (335)
T cd03802 2 RIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHE--VTLFASG 45 (335)
T ss_pred eEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCce--EEEEecC
Confidence 37776543 234446689999999999988 9999865
No 222
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional
Probab=21.34 E-value=48 Score=34.83 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=29.0
Q ss_pred hHHHHHHHHHhcCCChHHHHHHHHHHHHHHHhhcc
Q 039408 412 AEEIEWGLRRLMDGDDEVRKKVKEMREKSRTAVME 446 (456)
Q Consensus 412 ~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a~~~ 446 (456)
..++...+.++|.++|++|.+|+++...+++.+++
T Consensus 23 ~a~~~av~~~~~~~~pelr~~~~ei~~~v~~~v~~ 57 (567)
T PRK04156 23 KANVKAVMGKIMGENPELRSKAKEIIPIVKEVVEE 57 (567)
T ss_pred CCCCcchhhhhhccChhhhhhhhhHHHHHHHHHHH
Confidence 34556677889987899999999999999998765
No 223
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=21.22 E-value=1.5e+02 Score=26.28 Aligned_cols=37 Identities=16% Similarity=0.277 Sum_probs=29.2
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHc-CCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTN-RDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~-rGH~~~Vt~~t~~ 42 (456)
|++ |++.-.++-| .+=..+|+++|.+ .||+ |.++.++
T Consensus 1 ~k~--IllgVTGsia-a~ka~~l~~~L~k~~g~~--V~vv~T~ 38 (185)
T PRK06029 1 MKR--LIVGISGASG-AIYGVRLLQVLRDVGEIE--THLVISQ 38 (185)
T ss_pred CCE--EEEEEECHHH-HHHHHHHHHHHHhhcCCe--EEEEECH
Confidence 565 7777777777 5669999999999 5977 8888875
No 224
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.99 E-value=2.6e+02 Score=24.06 Aligned_cols=47 Identities=15% Similarity=0.202 Sum_probs=31.2
Q ss_pred HHHHHHHHHhhcCCCCCCCCeeEEEEcCCCc----------cHHHHHHHhCCCeEEEeccc
Q 039408 102 VKNEITNLIETESDSEDSDRVAGLFIDMFCT----------SMTDVANQLGIPCYLYFASP 152 (456)
Q Consensus 102 ~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~----------~~~~~A~~lgiP~v~~~~~~ 152 (456)
.+.++.++... +-+..||+|++--.+- -+..+|+++|+|++-.+.+.
T Consensus 109 vrnWlSQL~~h----AYcE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA~t 165 (219)
T KOG0081|consen 109 VRNWLSQLQTH----AYCENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSACT 165 (219)
T ss_pred HHHHHHHHHHh----hccCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeecccc
Confidence 45666666543 1346899999754332 25688999999987665443
No 225
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=20.92 E-value=87 Score=27.65 Aligned_cols=21 Identities=14% Similarity=0.059 Sum_probs=16.8
Q ss_pred HHHHHHHHHcCCCceEEEEEEcC
Q 039408 20 LVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 20 ~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
-..||+++..+||+ ||+++.+
T Consensus 32 G~~lA~~~~~~Ga~--V~li~g~ 52 (185)
T PF04127_consen 32 GAALAEEAARRGAE--VTLIHGP 52 (185)
T ss_dssp HHHHHHHHHHTT-E--EEEEE-T
T ss_pred HHHHHHHHHHCCCE--EEEEecC
Confidence 36899999999977 9999976
No 226
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=20.83 E-value=1.7e+02 Score=27.27 Aligned_cols=29 Identities=17% Similarity=0.344 Sum_probs=21.3
Q ss_pred CCeeEEEEcCCCcc-------HHHHHHHhCCCeEEEe
Q 039408 120 DRVAGLFIDMFCTS-------MTDVANQLGIPCYLYF 149 (456)
Q Consensus 120 ~~~d~vI~D~~~~~-------~~~~A~~lgiP~v~~~ 149 (456)
.++++|| |.-+++ +..+|+++|||++-|-
T Consensus 65 ~~i~~vI-DATHPfA~~is~na~~a~~~~~ipylR~e 100 (249)
T PF02571_consen 65 NGIDAVI-DATHPFAAEISQNAIEACRELGIPYLRFE 100 (249)
T ss_pred CCCcEEE-ECCCchHHHHHHHHHHHHhhcCcceEEEE
Confidence 4777775 665554 4577899999999883
No 227
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=20.81 E-value=2.4e+02 Score=24.27 Aligned_cols=31 Identities=35% Similarity=0.437 Sum_probs=18.8
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEE
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATV 38 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~ 38 (456)
+|+++.-++ -.=-=-+.+|+.|+++|++ |++
T Consensus 27 ~v~il~G~G-nNGgDgl~~AR~L~~~G~~--V~v 57 (169)
T PF03853_consen 27 RVLILCGPG-NNGGDGLVAARHLANRGYN--VTV 57 (169)
T ss_dssp EEEEEE-SS-HHHHHHHHHHHHHHHTTCE--EEE
T ss_pred eEEEEECCC-CChHHHHHHHHHHHHCCCe--EEE
Confidence 455555443 1112347889999999977 655
No 228
>PRK10239 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase; Provisional
Probab=20.25 E-value=1.5e+02 Score=25.47 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=20.7
Q ss_pred EEEEeccCCcCCCHHHHHHHHHHHHhc
Q 039408 293 VVFLCFGSMGSFVGPQLREIAIGLQRV 319 (456)
Q Consensus 293 vVyvsfGS~~~~~~~~~~~l~~al~~~ 319 (456)
.||+++||........++.....|++.
T Consensus 3 ~v~i~lGSN~g~~~~~l~~A~~~L~~~ 29 (159)
T PRK10239 3 VAYIAIGSNLASPLEQVNAALKALGDI 29 (159)
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcC
Confidence 589999998765666677777777664
No 229
>PF12179 IKKbetaNEMObind: I-kappa-kinase-beta NEMO binding domain; InterPro: IPR022007 This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with PF00069 from PFAM. These proteins are involved in inflammatory reactions. They cause release of NF-kappa-B into the nucleus of inflammatory cells and upregulation of transcription of proinflammatory cytokines. They perform this function by phosphorylating I-kappa-B proteins which are targeted for degradation to release NF-kappa-B. This kinase (I-kappa-kinase-beta) is found in association with IKK-alpha and NEMO (NF-kappa-B essential modulator). This domain is the binding site of IKK-beta for NEMO. ; GO: 0008384 IkappaB kinase activity; PDB: 3BRT_C 3BRV_C.
Probab=20.23 E-value=1e+02 Score=19.40 Aligned_cols=23 Identities=22% Similarity=0.254 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhccCCCchhccC
Q 039408 433 VKEMREKSRTAVMEEGSSNKSLG 455 (456)
Q Consensus 433 A~~l~~~~~~a~~~gGss~~~~~ 455 (456)
.-++...+++++++.++|.++++
T Consensus 12 lsqL~s~mqdt~~Eq~~S~m~lD 34 (38)
T PF12179_consen 12 LSQLESLMQDTMKEQDSSFMSLD 34 (38)
T ss_dssp HHHHHHHHHHHHHHCCS-GGGS-
T ss_pred HHHHHHHHHHHHHHhcchHHhcc
Confidence 34567778888899999999875
No 230
>PRK10125 putative glycosyl transferase; Provisional
Probab=20.13 E-value=3.9e+02 Score=26.78 Aligned_cols=132 Identities=12% Similarity=0.072 Sum_probs=0.0
Q ss_pred CCCeEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------------H
Q 039408 289 PPSSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------------F 354 (456)
Q Consensus 289 ~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------------f 354 (456)
++...+.+..|.........+..+++++...+..+-+.+-+..... ...++....+..+. +
T Consensus 238 ~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~~~-----~~~~v~~~g~~~~~~~l~~~y~~aDvfV~ 312 (405)
T PRK10125 238 TQGKPKIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFSPF-----TAGNVVNHGFETDKRKLMSALNQMDALVF 312 (405)
T ss_pred CCCCCEEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCCcc-----cccceEEecCcCCHHHHHHHHHhCCEEEE
Q ss_pred HhhcCCcee----EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 355 LNRTAGVGL----SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 355 ~~~~g~~G~----al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
-+..-+-|+ |+++|+|+|+....+ ...+.+. +.|+.++ .-+.+.|+++++..+. +..++
T Consensus 313 pS~~Egfp~vilEAmA~G~PVVat~~gG-----~~Eiv~~-~~G~lv~----------~~d~~~La~~~~~~~~-~~~~~ 375 (405)
T PRK10125 313 SSRVDNYPLILCEALSIGVPVIATHSDA-----AREVLQK-SGGKTVS----------EEEVLQLAQLSKPEIA-QAVFG 375 (405)
T ss_pred CCccccCcCHHHHHHHcCCCEEEeCCCC-----hHHhEeC-CcEEEEC----------CCCHHHHHhccCHHHH-HHhhh
Q ss_pred HHHHHHHHHHHH
Q 039408 431 KKVKEMREKSRT 442 (456)
Q Consensus 431 ~~A~~l~~~~~~ 442 (456)
+..++.++.+.+
T Consensus 376 ~~~~~~r~~~~~ 387 (405)
T PRK10125 376 TTLAEFSQRSRA 387 (405)
T ss_pred hHHHHHHHHHHH
No 231
>PRK13886 conjugal transfer protein TraL; Provisional
Probab=20.11 E-value=2.1e+02 Score=26.43 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=34.5
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|++.|+++-.=++.|-......||..|+++|++ |.++-.+
T Consensus 1 m~~i~~i~~~KGGvGKSt~a~~la~~l~~~g~~--vl~iD~D 40 (241)
T PRK13886 1 MAKIHMVLQGKGGVGKSFIAATIAQYKASKGQK--PLCIDTD 40 (241)
T ss_pred CCeEEEEecCCCCCcHHHHHHHHHHHHHhCCCC--EEEEECC
Confidence 777777777888999999999999999999977 8887664
No 232
>KOG2635 consensus Medium subunit of clathrin adaptor complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.05 E-value=1.5e+02 Score=29.67 Aligned_cols=40 Identities=28% Similarity=0.337 Sum_probs=28.6
Q ss_pred hHHHHHHHHHhcCC--ChHHHHHHHHHHHHHHHhhccCCCch
Q 039408 412 AEEIEWGLRRLMDG--DDEVRKKVKEMREKSRTAVMEEGSSN 451 (456)
Q Consensus 412 ~~~l~~ai~~vl~~--~~~~r~~A~~l~~~~~~a~~~gGss~ 451 (456)
+|.|-+.|++--+. ..++|+||++++..=+++...||++.
T Consensus 140 EEKi~e~v~~nke~ea~q~mkrKaKElqr~r~ea~rrgg~~~ 181 (512)
T KOG2635|consen 140 EEKIHELVMRNKEREAKQEMKRKAKELQRARKEAERRGGSLN 181 (512)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhccccccC
Confidence 56666666653321 14899999999998889888897644
Done!