Query 039408
Match_columns 456
No_of_seqs 172 out of 1308
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 15:57:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039408.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039408hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.3E-64 4.6E-69 509.3 30.6 412 2-455 12-446 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.1E-56 3.9E-61 458.4 32.1 418 3-455 6-461 (480)
3 2c1x_A UDP-glucose flavonoid 3 100.0 8.6E-57 3E-61 456.4 30.0 415 2-455 6-444 (456)
4 2acv_A Triterpene UDP-glucosyl 100.0 2.8E-56 9.7E-61 453.7 31.1 417 2-455 8-455 (463)
5 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.5E-56 1.9E-60 454.5 27.5 424 1-455 6-471 (482)
6 2iya_A OLEI, oleandomycin glyc 100.0 1E-36 3.6E-41 307.2 25.0 372 1-442 10-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 4.2E-36 1.4E-40 300.0 17.0 336 2-442 21-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.9E-34 6.6E-39 289.8 19.3 351 4-441 1-383 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 5E-33 1.7E-37 279.6 17.6 350 4-441 1-384 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 1.3E-31 4.4E-36 268.2 16.5 346 5-441 2-366 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 7.3E-30 2.5E-34 256.2 25.9 351 3-442 20-397 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.4E-29 4.8E-34 252.6 26.8 355 1-442 2-382 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 1.7E-29 5.8E-34 254.8 22.7 354 1-442 5-383 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 5.5E-29 1.9E-33 252.0 22.9 346 3-442 20-419 (441)
15 2p6p_A Glycosyl transferase; X 100.0 3.4E-29 1.2E-33 248.8 18.0 331 4-442 1-363 (384)
16 4fzr_A SSFS6; structural genom 99.9 7.6E-27 2.6E-31 233.0 15.8 336 3-442 15-384 (398)
17 3oti_A CALG3; calicheamicin, T 99.9 2.1E-25 7.1E-30 222.6 20.0 326 3-442 20-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.9 1.4E-24 4.7E-29 215.9 20.0 330 4-442 2-372 (391)
19 3otg_A CALG1; calicheamicin, T 99.9 4E-22 1.4E-26 199.4 26.1 345 3-442 20-392 (412)
20 2o6l_A UDP-glucuronosyltransfe 99.8 3.3E-20 1.1E-24 162.4 9.4 151 276-442 6-170 (170)
21 3s2u_A UDP-N-acetylglucosamine 99.7 6.7E-18 2.3E-22 166.1 12.4 305 1-430 1-328 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.3 1.5E-10 5.1E-15 113.0 21.2 128 290-433 182-330 (364)
23 1vgv_A UDP-N-acetylglucosamine 98.0 0.00071 2.4E-08 65.7 22.4 123 290-431 204-347 (384)
24 2jzc_A UDP-N-acetylglucosamine 98.0 1.3E-06 4.6E-11 78.5 2.4 119 289-422 26-196 (224)
25 3c48_A Predicted glycosyltrans 97.8 0.004 1.4E-07 61.5 23.6 49 364-428 345-393 (438)
26 3okp_A GDP-mannose-dependent a 97.8 0.0059 2E-07 59.2 23.8 108 1-148 2-115 (394)
27 3ot5_A UDP-N-acetylglucosamine 97.8 0.00031 1.1E-08 69.3 14.5 53 364-433 316-368 (403)
28 1v4v_A UDP-N-acetylglucosamine 97.7 0.0011 3.9E-08 64.2 17.2 52 364-432 289-340 (376)
29 3fro_A GLGA glycogen synthase; 97.7 0.0045 1.5E-07 60.9 21.3 56 364-435 350-409 (439)
30 2r60_A Glycosyl transferase, g 97.5 0.027 9.3E-07 56.7 25.0 49 364-428 378-426 (499)
31 3dzc_A UDP-N-acetylglucosamine 97.4 0.009 3.1E-07 58.6 19.3 68 364-452 322-389 (396)
32 2gek_A Phosphatidylinositol ma 97.2 0.039 1.3E-06 53.5 20.8 50 364-429 303-352 (406)
33 2jjm_A Glycosyl transferase, g 96.6 0.52 1.8E-05 45.3 22.8 37 4-42 16-53 (394)
34 4hwg_A UDP-N-acetylglucosamine 96.3 0.092 3.2E-06 51.1 15.7 118 291-424 203-341 (385)
35 3s28_A Sucrose synthase 1; gly 96.3 0.12 4.2E-06 55.1 17.5 45 364-423 684-728 (816)
36 3hbm_A UDP-sugar hydrolase; PS 95.8 0.0043 1.5E-07 57.8 3.2 103 291-399 157-274 (282)
37 2hy7_A Glucuronosyltransferase 94.8 3.1 0.00011 40.3 20.5 66 340-427 263-353 (406)
38 2f9f_A First mannosyl transfer 94.8 0.029 9.9E-07 47.9 4.9 125 294-437 25-174 (177)
39 2xci_A KDO-transferase, 3-deox 89.2 0.27 9.3E-06 47.4 4.2 65 364-442 298-365 (374)
40 3rhz_A GTF3, nucleotide sugar 88.2 0.32 1.1E-05 46.3 3.8 61 364-442 260-322 (339)
41 2bfw_A GLGA glycogen synthase; 87.9 2 6.7E-05 36.6 8.5 45 364-424 135-179 (200)
42 4gyw_A UDP-N-acetylglucosamine 85.7 2.3 8E-05 44.8 9.1 86 290-375 521-629 (723)
43 2iw1_A Lipopolysaccharide core 84.3 0.98 3.4E-05 42.8 5.1 53 364-431 290-342 (374)
44 2iuy_A Avigt4, glycosyltransfe 84.3 0.77 2.6E-05 43.1 4.2 40 1-42 1-56 (342)
45 3q3e_A HMW1C-like glycosyltran 83.5 2.7 9.2E-05 43.1 8.0 36 292-327 441-476 (631)
46 3beo_A UDP-N-acetylglucosamine 82.8 7.4 0.00025 36.6 10.7 52 364-432 297-348 (375)
47 3qhp_A Type 1 capsular polysac 81.6 2.2 7.6E-05 35.0 5.7 50 364-430 94-144 (166)
48 3oy2_A Glycosyltransferase B73 79.6 3.8 0.00013 39.3 7.4 35 5-42 2-39 (413)
49 2x6q_A Trehalose-synthase TRET 76.6 2.6 8.9E-05 40.6 5.2 40 1-42 38-79 (416)
50 3beo_A UDP-N-acetylglucosamine 73.7 2 6.9E-05 40.6 3.4 38 2-42 7-46 (375)
51 2iuy_A Avigt4, glycosyltransfe 73.6 2.7 9.1E-05 39.3 4.2 45 364-424 261-307 (342)
52 1ccw_A Protein (glutamate muta 67.7 6.6 0.00023 31.6 4.8 40 1-42 1-40 (137)
53 2vsy_A XCC0866; transferase, g 65.2 26 0.00089 35.1 9.8 39 2-42 204-246 (568)
54 3vue_A GBSS-I, granule-bound s 63.6 3.8 0.00013 41.5 3.1 37 3-43 9-53 (536)
55 2x0d_A WSAF; GT4 family, trans 63.3 4.1 0.00014 39.6 3.2 52 364-432 334-385 (413)
56 1psw_A ADP-heptose LPS heptosy 61.8 50 0.0017 30.5 10.6 38 5-42 2-39 (348)
57 2x6q_A Trehalose-synthase TRET 56.8 6.1 0.00021 37.9 3.1 49 364-430 335-383 (416)
58 3tov_A Glycosyl transferase fa 55.8 65 0.0022 30.1 10.1 39 4-42 9-47 (349)
59 2iw1_A Lipopolysaccharide core 54.6 6.9 0.00024 36.7 3.0 35 6-42 3-40 (374)
60 1id1_A Putative potassium chan 50.5 11 0.00038 30.5 3.3 34 1-41 1-34 (153)
61 1rzu_A Glycogen synthase 1; gl 50.5 13 0.00044 36.5 4.4 36 5-42 2-43 (485)
62 3hbm_A UDP-sugar hydrolase; PS 49.4 24 0.00083 32.1 5.7 31 6-42 3-37 (282)
63 2qzs_A Glycogen synthase; glyc 47.8 15 0.0005 36.1 4.3 36 5-42 2-43 (485)
64 4dzz_A Plasmid partitioning pr 46.6 75 0.0026 26.5 8.3 35 6-42 4-39 (206)
65 2oxj_A Hybrid alpha/beta pepti 46.6 16 0.00054 21.3 2.4 28 413-440 4-31 (34)
66 3qjg_A Epidermin biosynthesis 46.0 21 0.0007 30.1 4.3 36 4-42 6-41 (175)
67 1g5t_A COB(I)alamin adenosyltr 44.0 1.5E+02 0.0051 25.2 11.0 36 4-41 29-64 (196)
68 2hy6_A General control protein 43.5 19 0.00064 20.9 2.4 29 413-441 4-32 (34)
69 3to5_A CHEY homolog; alpha(5)b 42.2 47 0.0016 26.3 5.8 33 120-152 56-97 (134)
70 3dm5_A SRP54, signal recogniti 41.5 2.4E+02 0.0083 27.3 11.8 37 5-43 102-138 (443)
71 3zqu_A Probable aromatic acid 41.4 32 0.0011 29.8 4.9 38 2-42 3-40 (209)
72 1kd8_B GABH BLL, GCN4 acid bas 37.4 34 0.0012 20.2 2.9 31 413-443 4-34 (36)
73 3c3g_A Alpha/beta peptide with 37.2 27 0.00093 20.1 2.4 29 413-441 3-31 (33)
74 2x0d_A WSAF; GT4 family, trans 37.1 4.8 0.00016 39.2 -1.3 38 3-42 46-88 (413)
75 2r8r_A Sensor protein; KDPD, P 34.9 88 0.003 27.4 6.7 38 3-42 6-43 (228)
76 3tl4_X Glutaminyl-tRNA synthet 34.7 21 0.00074 30.3 2.6 49 379-442 100-154 (187)
77 3bgw_A DNAB-like replicative h 34.6 1.5E+02 0.0052 28.7 9.2 37 6-44 200-236 (444)
78 3c3f_A Alpha/beta peptide with 34.5 32 0.0011 19.9 2.4 29 413-441 4-32 (34)
79 2qzs_A Glycogen synthase; glyc 33.9 27 0.00092 34.1 3.7 52 364-431 386-449 (485)
80 3m48_A General control protein 33.6 25 0.00086 20.3 1.9 28 414-441 4-31 (33)
81 2i2x_B MTAC, methyltransferase 33.2 51 0.0017 29.5 5.1 40 3-44 123-162 (258)
82 1y80_A Predicted cobalamin bin 33.2 39 0.0013 29.0 4.2 40 3-44 88-127 (210)
83 2yxb_A Coenzyme B12-dependent 33.0 31 0.001 28.4 3.3 38 3-42 18-55 (161)
84 1mvl_A PPC decarboxylase athal 32.5 45 0.0015 28.9 4.4 37 2-42 18-54 (209)
85 1rzu_A Glycogen synthase 1; gl 31.8 30 0.001 33.8 3.6 51 364-430 385-447 (485)
86 2lpm_A Two-component response 31.1 44 0.0015 26.0 3.8 40 101-148 41-85 (123)
87 2d1p_B TUSC, hypothetical UPF0 30.4 85 0.0029 24.1 5.3 37 1-40 1-39 (119)
88 3ip0_A 2-amino-4-hydroxy-6-hyd 30.2 58 0.002 26.8 4.4 28 293-320 2-29 (158)
89 2qx0_A 7,8-dihydro-6-hydroxyme 29.9 78 0.0027 26.0 5.2 28 293-320 3-30 (159)
90 1f9y_A HPPK, protein (6-hydrox 29.8 59 0.002 26.7 4.4 28 293-320 2-29 (158)
91 3mcu_A Dipicolinate synthase, 29.6 43 0.0015 28.9 3.7 38 2-42 4-42 (207)
92 2lnd_A De novo designed protei 29.5 50 0.0017 23.4 3.3 48 367-424 50-100 (112)
93 1g63_A Epidermin modifying enz 29.2 48 0.0016 27.9 3.9 38 1-42 1-38 (181)
94 3gl9_A Response regulator; bet 28.9 95 0.0033 23.1 5.5 33 120-152 45-86 (122)
95 3lqk_A Dipicolinate synthase s 28.7 46 0.0016 28.6 3.8 38 2-42 6-44 (201)
96 3gpi_A NAD-dependent epimerase 28.6 62 0.0021 28.8 4.9 34 1-41 1-34 (286)
97 2bni_A General control protein 28.5 30 0.001 20.1 1.6 29 413-441 4-32 (34)
98 3qbc_A 2-amino-4-hydroxy-6-hyd 27.9 72 0.0025 26.3 4.6 29 292-320 5-33 (161)
99 1jx7_A Hypothetical protein YC 27.3 49 0.0017 25.0 3.4 39 1-41 1-42 (117)
100 2ejb_A Probable aromatic acid 27.2 80 0.0028 26.7 5.0 37 1-42 1-37 (189)
101 2l82_A Designed protein OR32; 26.7 1.3E+02 0.0044 22.7 5.4 35 292-330 2-36 (162)
102 4b4k_A N5-carboxyaminoimidazol 26.2 1.1E+02 0.0036 25.7 5.3 22 426-447 156-177 (181)
103 3ezx_A MMCP 1, monomethylamine 26.2 70 0.0024 27.6 4.6 40 3-44 92-131 (215)
104 1uo4_A General control protein 25.8 41 0.0014 19.6 1.9 29 413-441 4-32 (34)
105 1p3y_1 MRSD protein; flavoprot 25.7 46 0.0016 28.4 3.2 38 2-42 7-44 (194)
106 1cbk_A Protein (7,8-dihydro-6- 25.5 78 0.0027 26.0 4.4 28 293-320 3-30 (160)
107 2r2v_A GCN4 leucine zipper; co 24.9 58 0.002 18.9 2.4 29 413-441 4-32 (34)
108 1kd8_A GABH AIV, GCN4 acid bas 24.0 86 0.0029 18.4 3.0 31 413-443 4-34 (36)
109 1sbz_A Probable aromatic acid 23.6 90 0.0031 26.6 4.6 35 5-42 2-37 (197)
110 1hdo_A Biliverdin IX beta redu 23.3 84 0.0029 26.0 4.5 35 1-41 1-35 (206)
111 2xxa_A Signal recognition part 23.2 4.2E+02 0.014 25.4 10.0 37 5-43 102-139 (433)
112 4dik_A Flavoprotein; TM0755, e 23.2 64 0.0022 31.1 4.1 46 280-325 254-299 (410)
113 2xvy_A Chelatase, putative; me 23.0 90 0.0031 27.8 4.9 40 290-329 9-50 (269)
114 3t6k_A Response regulator rece 23.0 1.5E+02 0.005 22.5 5.7 33 120-152 47-88 (136)
115 2hy5_B Intracellular sulfur ox 22.8 94 0.0032 24.6 4.4 37 1-40 5-43 (136)
116 1qkk_A DCTD, C4-dicarboxylate 22.7 1.8E+02 0.006 22.6 6.2 64 367-442 74-137 (155)
117 3tov_A Glycosyl transferase fa 22.5 67 0.0023 30.0 4.0 36 290-325 184-222 (349)
118 1qzu_A Hypothetical protein MD 21.9 67 0.0023 27.7 3.5 38 2-42 18-56 (206)
119 3c01_A Surface presentation of 21.5 1.7E+02 0.0057 18.7 4.4 32 410-442 1-32 (48)
120 2jk1_A HUPR, hydrogenase trans 21.2 2.4E+02 0.0082 21.2 6.7 63 368-441 72-134 (139)
121 3vot_A L-amino acid ligase, BL 21.1 4.5E+02 0.015 24.7 9.9 26 120-145 74-101 (425)
122 3oow_A Phosphoribosylaminoimid 20.9 3.5E+02 0.012 22.2 8.0 75 366-447 81-160 (166)
123 3obb_A Probable 3-hydroxyisobu 20.6 59 0.002 29.8 3.1 31 1-40 3-33 (300)
124 3mc3_A DSRE/DSRF-like family p 20.3 1E+02 0.0036 24.1 4.2 27 13-41 28-54 (134)
125 3bzy_A ESCU; auto cleavage pro 20.2 1.9E+02 0.0065 18.9 4.5 34 408-442 5-38 (54)
126 3ghy_A Ketopantoate reductase 20.1 55 0.0019 30.4 2.8 34 1-41 1-34 (335)
127 3m6m_D Sensory/regulatory prot 20.1 1.4E+02 0.0048 23.0 5.0 33 120-152 57-100 (143)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.3e-64 Score=509.35 Aligned_cols=412 Identities=19% Similarity=0.286 Sum_probs=323.2
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSP 81 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~ 81 (456)
+++||+++|+|++||++||++||+.|+++|++++|||++++ ...+++.... ....++|+|+.++++. |++
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~--------~~~~~~~~~~-~~~~~~i~~~~ipdgl-p~~ 81 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTT--------TTNDTLFSRS-NEFLPNIKYYNVHDGL-PKG 81 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECH--------HHHHHSCSSS-SCCCTTEEEEECCCCC-CTT
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCH--------HHHHhhhccc-ccCCCCceEEecCCCC-CCC
Confidence 36799999999999999999999999999954559999975 2223332100 0113579999999765 555
Q ss_pred CCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHHh
Q 039408 82 DQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFML 160 (456)
Q Consensus 82 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 160 (456)
.+. .+....+..++....+.+++.+++++++ ...++||||+|.+++|+.++|+++|||++.||+++++.++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~ 156 (454)
T 3hbf_A 82 YVSSGNPREPIFLFIKAMQENFKHVIDEAVAE-----TGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHV 156 (454)
T ss_dssp CCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHH-----HCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHH
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHHHhh-----cCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHH
Confidence 443 3344445566666666788888887654 2357999999999999999999999999999999999998888
Q ss_pred hcccccccccccccccCCccccCCCCCCce-ecCCCCCCCCCCCCChhhhc-cccccHHHHHHHHHhhccCCeEEecccc
Q 039408 161 HFPNIDAQIANEFVESNTDFFVPKDSTTEL-VIPSFANPLPPSVLPSTVLK-RKRDGYVWYLRHAARYMETEGIVVNTFQ 238 (456)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 238 (456)
+.+.+........ ...+..+ .+||+| +++.+++|..+.. ........+.+......+++++++||++
T Consensus 157 ~~~~~~~~~~~~~----------~~~~~~~~~iPg~p-~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~ 225 (454)
T 3hbf_A 157 YTDLIREKTGSKE----------VHDVKSIDVLPGFP-ELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFA 225 (454)
T ss_dssp THHHHHHTCCHHH----------HTTSSCBCCSTTSC-CBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCG
T ss_pred hhHHHHhhcCCCc----------cccccccccCCCCC-CcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChh
Confidence 8765543311100 1112233 389986 6888899987652 1122356666777778899999999999
Q ss_pred cccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHHHHh
Q 039408 239 ELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGLQR 318 (456)
Q Consensus 239 ~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~ 318 (456)
+||+++++++++ ..+++++|||++...... ....+.+|.+|||.++++|||||||||+...+.+++.+++.+|+.
T Consensus 226 eLE~~~~~~~~~-~~~~v~~vGPl~~~~~~~----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~ 300 (454)
T 3hbf_A 226 TIHPLIENELNS-KFKLLLNVGPFNLTTPQR----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEE 300 (454)
T ss_dssp GGCHHHHHHHHT-TSSCEEECCCHHHHSCCS----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHh-cCCCEEEECCcccccccc----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHh
Confidence 999999999886 457999999998643211 113356799999999889999999999999999999999999999
Q ss_pred cCCeEEEEEeCCCCCccCCCC-----ccccccccccCchh----------HHhhcCCcee--EEeeCcceeccccccccc
Q 039408 319 VGFRFLWSIREPSKSKIYLPG-----EYTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIATWPLYAEQQ 381 (456)
Q Consensus 319 ~~~~~vw~~~~~~~~~~~~~~-----~~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~~P~~~DQ~ 381 (456)
++++|||+++..... .++. .++|+++.+|+||. |++|+|.+++ |+++|||+|+||+++||+
T Consensus 301 ~~~~flw~~~~~~~~--~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~ 378 (454)
T 3hbf_A 301 CGFPFIWSFRGDPKE--KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQG 378 (454)
T ss_dssp HCCCEEEECCSCHHH--HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred CCCeEEEEeCCcchh--cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHH
Confidence 999999999875110 1222 24688888999985 5666555555 999999999999999999
Q ss_pred hhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh---HHHHHHHHHHHHHHHhhccCCCchhccC
Q 039408 382 MNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD---EVRKKVKEMREKSRTAVMEEGSSNKSLG 455 (456)
Q Consensus 382 ~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~---~~r~~A~~l~~~~~~a~~~gGss~~~~~ 455 (456)
.||+++++.||+|+.+.. +.+++++|+++|+++|+ ++ +||+||+++++++++++++||||+.||+
T Consensus 379 ~Na~~v~~~~g~Gv~l~~--------~~~~~~~l~~av~~ll~-~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~ 446 (454)
T 3hbf_A 379 LNTILTESVLEIGVGVDN--------GVLTKESIKKALELTMS-SEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFT 446 (454)
T ss_dssp HHHHHHHTTSCSEEECGG--------GSCCHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred HHHHHHHHhhCeeEEecC--------CCCCHHHHHHHHHHHHC-CChHHHHHHHHHHHHHHHHHhhccCCCHHHHHH
Confidence 999999997899999984 47999999999999998 65 8999999999999999999999999986
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.1e-56 Score=458.36 Aligned_cols=418 Identities=34% Similarity=0.600 Sum_probs=297.6
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcC-CCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNR-DRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSP 81 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~r-GH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~ 81 (456)
++||+++|+|++||++||++||++|++| ||+ |||++++.+. +...++++. .....+++|+.++....+..
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~--Vt~~t~~~~~---~~~~~~~~~----~~~~~~i~~~~l~~~~~~~~ 76 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLT--VTFVIAGEGP---PSKAQRTVL----DSLPSSISSVFLPPVDLTDL 76 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCE--EEEEECCSSS---CC-CHHHHH----C-CCTTEEEEECCCCCCTTS
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCE--EEEEECCCcc---hhhhhhhhc----cccCCCceEEEcCCCCCCCC
Confidence 4799999999999999999999999998 988 9999986321 112222221 01135799999986532211
Q ss_pred CCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCe-eEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHHh
Q 039408 82 DQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRV-AGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFML 160 (456)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~-d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 160 (456)
....+....+...+....+.+++.++++.+ ..++ ||||+|.++.|+..+|+++|||++.++++++..++.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-------~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~ 149 (480)
T 2vch_A 77 SSSTRIESRISLTVTRSNPELRKVFDSFVE-------GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFL 149 (480)
T ss_dssp CTTCCHHHHHHHHHHTTHHHHHHHHHHHHH-------TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHH
T ss_pred CCchhHHHHHHHHHHhhhHHHHHHHHHhcc-------CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHH
Confidence 111122222222233333445555554432 1467 99999999999999999999999999999998777777
Q ss_pred hcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEecccccc
Q 039408 161 HFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTFQEL 240 (456)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l 240 (456)
+++.+......+ + .+.+....+|+++ +++..+++..+..+....+..+.+....++++.++++||+++|
T Consensus 150 ~~~~~~~~~~~~-------~---~~~~~~~~~Pg~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~el 218 (480)
T 2vch_A 150 HLPKLDETVSCE-------F---RELTEPLMLPGCV-PVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFEL 218 (480)
T ss_dssp HHHHHHHHCCSC-------G---GGCSSCBCCTTCC-CBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTT
T ss_pred HHHHHHhcCCCc-------c---cccCCcccCCCCC-CCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHH
Confidence 665433221111 1 1111223467765 5555666665533211234445556666778899999999999
Q ss_pred cHHHHHHHHcCC--CCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHHHHh
Q 039408 241 EPYAIESISVNG--MPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGLQR 318 (456)
Q Consensus 241 e~~~~~~~~~~~--~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~ 318 (456)
|++.+..+++.. .+++++|||++....... ....+.+|.+|||++++++||||||||+...+.+++++++.+|+.
T Consensus 219 e~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~---~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~ 295 (480)
T 2vch_A 219 EPNAIKALQEPGLDKPPVYPVGPLVNIGKQEA---KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLAD 295 (480)
T ss_dssp SHHHHHHHHSCCTTCCCEEECCCCCCCSCSCC--------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcccCCCcEEEEecccccccccc---CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHh
Confidence 999988887521 368999999986532100 013456899999998889999999999998899999999999999
Q ss_pred cCCeEEEEEeCCCC-C---------ccCCC-Cccccc---------cccccCchh----------HHhhcCCcee--EEe
Q 039408 319 VGFRFLWSIREPSK-S---------KIYLP-GEYTNL---------KVKEMLPEG----------FLNRTAGVGL--SLW 366 (456)
Q Consensus 319 ~~~~~vw~~~~~~~-~---------~~~~~-~~~~n~---------~~~~~lP~~----------f~~~~g~~G~--al~ 366 (456)
++++|||+++.... + ...+. ..|+|+ .+.+|+||. |++|+|.+++ |++
T Consensus 296 ~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~ 375 (480)
T 2vch_A 296 SEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVV 375 (480)
T ss_dssp TTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHH
T ss_pred cCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHH
Confidence 99999999987521 0 00011 244554 445699974 6666666666 999
Q ss_pred eCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCC--ChHHHHHHHHHHHHHHHhh
Q 039408 367 YGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDG--DDEVRKKVKEMREKSRTAV 444 (456)
Q Consensus 367 ~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~--~~~~r~~A~~l~~~~~~a~ 444 (456)
+|||||+||+++||+.||+++++.||+|+.+.... ++.+++++|+++|+++|.+ +++||+||+++++++++|+
T Consensus 376 ~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~-----~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~ 450 (480)
T 2vch_A 376 SGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD-----DGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVL 450 (480)
T ss_dssp HTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT-----TSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEEeccccccchHHHHHHHHHhCeEEEeeccc-----CCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999864569999997421 1369999999999999963 3689999999999999999
Q ss_pred ccCCCchhccC
Q 039408 445 MEEGSSNKSLG 455 (456)
Q Consensus 445 ~~gGss~~~~~ 455 (456)
++||||+.+++
T Consensus 451 ~~gGss~~~~~ 461 (480)
T 2vch_A 451 KDDGTSTKALS 461 (480)
T ss_dssp STTSHHHHHHH
T ss_pred hcCCCHHHHHH
Confidence 99999999875
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=8.6e-57 Score=456.39 Aligned_cols=415 Identities=17% Similarity=0.259 Sum_probs=299.3
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSP 81 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~ 81 (456)
++.||+++|+|++||++|+++||++|++|||++.|||++++ ...+++..........+++|+.+++.. |++
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~--------~~~~~~~~~~~~~~~~~i~~~~i~~gl-p~~ 76 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTS--------QSNASIFHDSMHTMQCNIKSYDISDGV-PEG 76 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECH--------HHHHHHC-------CTTEEEEECCCCC-CTT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCc--------hhHHHhhccccccCCCceEEEeCCCCC-CCc
Confidence 46799999999999999999999999999999889999875 122222100000112579999998653 433
Q ss_pred CCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHHHh
Q 039408 82 DQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGFML 160 (456)
Q Consensus 82 ~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 160 (456)
.+. ......+..+.....+.+++.++++.++ ...++||||+|.++.|+..+|+++|||++.+++++++.+..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-----~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~ 151 (456)
T 2c1x_A 77 YVFAGRPQEDIELFTRAAPESFRQGMVMAVAE-----TGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHV 151 (456)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHH-----HTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHH
T ss_pred ccccCChHHHHHHHHHHhHHHHHHHHHHHHhc-----cCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHh
Confidence 221 2233334445544445666777766543 1258999999999999999999999999999999988776655
Q ss_pred hcccccccccccccccCCccccCCCCCCce-ecCCCCCCCCCCCCChhhhccc-ccc-HHHHHHHHHhhccCCeEEeccc
Q 039408 161 HFPNIDAQIANEFVESNTDFFVPKDSTTEL-VIPSFANPLPPSVLPSTVLKRK-RDG-YVWYLRHAARYMETEGIVVNTF 237 (456)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~l~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~s~ 237 (456)
+.+.+......+. .. ......+ .+|+++ .++..++|..+.... ... ...+.+......+++++++||+
T Consensus 152 ~~~~~~~~~~~~~-----~~---~~~~~~~~~~pg~~-~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~ 222 (456)
T 2c1x_A 152 YIDEIREKIGVSG-----IQ---GREDELLNFIPGMS-KVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSF 222 (456)
T ss_dssp THHHHHHHHCSSC-----CT---TCTTCBCTTSTTCT-TCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSC
T ss_pred hhHHHHhccCCcc-----cc---cccccccccCCCCC-cccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECCh
Confidence 4433221111000 00 0001112 367775 456666665443211 111 2333334445567899999999
Q ss_pred ccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHHHH
Q 039408 238 QELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGLQ 317 (456)
Q Consensus 238 ~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~ 317 (456)
++||++.++.+++. .+++++|||++...... ....+.+|.+||+.+++++||||||||+...+.+++.+++.+|+
T Consensus 223 ~~le~~~~~~~~~~-~~~~~~vGpl~~~~~~~----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 297 (456)
T 2c1x_A 223 EELDDSLTNDLKSK-LKTYLNIGPFNLITPPP----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALE 297 (456)
T ss_dssp GGGCHHHHHHHHHH-SSCEEECCCHHHHC-------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHhc-CCCEEEecCcccCcccc----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHH
Confidence 99999988888763 47899999998643211 01223569999999888999999999998888899999999999
Q ss_pred hcCCeEEEEEeCCCCCccCCCCc-----cccccccccCchh----------HHhhcCCcee--EEeeCcceecccccccc
Q 039408 318 RVGFRFLWSIREPSKSKIYLPGE-----YTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIATWPLYAEQ 380 (456)
Q Consensus 318 ~~~~~~vw~~~~~~~~~~~~~~~-----~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~~P~~~DQ 380 (456)
.++++|||+++..... .++.. ++|+++.+|+||. |++|+|.+++ |+++|||||+||++.||
T Consensus 298 ~~~~~~lw~~~~~~~~--~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ 375 (456)
T 2c1x_A 298 ASRVPFIWSLRDKARV--HLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQ 375 (456)
T ss_dssp HHTCCEEEECCGGGGG--GSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred hcCCeEEEEECCcchh--hCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhH
Confidence 9999999999865211 12321 4678888999974 5666665555 99999999999999999
Q ss_pred chhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh---HHHHHHHHHHHHHHHhhccCCCchhccC
Q 039408 381 QMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD---EVRKKVKEMREKSRTAVMEEGSSNKSLG 455 (456)
Q Consensus 381 ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~---~~r~~A~~l~~~~~~a~~~gGss~~~~~ 455 (456)
+.||+++++.||+|+.+.. +.+++++|+++|+++|+ ++ +||+||+++++.+++++++||||++||+
T Consensus 376 ~~Na~~l~~~~g~g~~l~~--------~~~~~~~l~~~i~~ll~-~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~ 444 (456)
T 2c1x_A 376 RLNGRMVEDVLEIGVRIEG--------GVFTKSGLMSCFDQILS-QEKGKKLRENLRALRETADRAVGPKGSSTENFI 444 (456)
T ss_dssp HHHHHHHHHTSCCEEECGG--------GSCCHHHHHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHH
T ss_pred HHHHHHHHHHhCeEEEecC--------CCcCHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHH
Confidence 9999999998999999974 46999999999999998 65 8999999999999999999999999986
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2.8e-56 Score=453.70 Aligned_cols=417 Identities=43% Similarity=0.758 Sum_probs=301.7
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcC--CCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNR--DRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPP 79 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 79 (456)
+++||+++|+|++||++||++||++|++| ||+ |||++++........+.+++.. ....+++|+.+++...+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~--Vt~v~t~~~~~~~~~~~~~~~~-----~~~~~i~~~~lp~~~~~ 80 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLY--ITVFCIKFPGMPFADSYIKSVL-----ASQPQIQLIDLPEVEPP 80 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEE--EEEEECCCTTCCCCHHHHHHHH-----CSCTTEEEEECCCCCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcE--EEEEEcCCcchhhhhhhhhhcc-----cCCCCceEEECCCCCCC
Confidence 46799999999999999999999999999 966 9999987433211122333322 12357999999876433
Q ss_pred CCCCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHHHHH
Q 039408 80 SPDQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASFLGF 158 (456)
Q Consensus 80 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 158 (456)
. .+. ......+...+....+.+++.++++ + ..++||||+|.++.|+..+|+++|||++.+++++++.+..
T Consensus 81 ~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~-------~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 151 (463)
T 2acv_A 81 P-QELLKSPEFYILTFLESLIPHVKATIKTI-L-------SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSL 151 (463)
T ss_dssp C-GGGGGSHHHHHHHHHHHTHHHHHHHHHHH-C-------CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHH
T ss_pred c-ccccCCccHHHHHHHHhhhHHHHHHHHhc-c-------CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHH
Confidence 2 111 1111112222333334444444443 1 2589999999999999999999999999999999988777
Q ss_pred HhhcccccccccccccccCCccccCCCCCC---ceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEec
Q 039408 159 MLHFPNIDAQIANEFVESNTDFFVPKDSTT---ELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVN 235 (456)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (456)
+++.+.+.... + + .+... ...+|++..+++.++++..+..+ ...+..+.+.....++++++++|
T Consensus 152 ~~~~~~~~~~~--~-------~---~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~n 218 (463)
T 2acv_A 152 MLSLKNRQIEE--V-------F---DDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVN 218 (463)
T ss_dssp HHHGGGSCTTC--C-------C---CCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEES
T ss_pred HHHHHhhcccC--C-------C---CCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEEC
Confidence 77665443111 1 1 11111 34567772255566666655432 23345555566667788999999
Q ss_pred ccccccHHHHHHHHcCC--CCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCc-CCCHHHHHHH
Q 039408 236 TFQELEPYAIESISVNG--MPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMG-SFVGPQLREI 312 (456)
Q Consensus 236 s~~~le~~~~~~~~~~~--~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~-~~~~~~~~~l 312 (456)
|+++||++..+.+.+.. .+++++|||++...........+..+.++.+||+.+++++||||||||+. ..+.+++.++
T Consensus 219 t~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~ 298 (463)
T 2acv_A 219 TFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREI 298 (463)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHH
T ss_pred CHHHHhHHHHHHHHhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHH
Confidence 99999999988887644 67899999998643200000000234689999999888999999999998 8888999999
Q ss_pred HHHHHhcCCeEEEEEeCCCCCccCCCC-----c--cccccccccCchh----------HHhhcCCcee--EEeeCcceec
Q 039408 313 AIGLQRVGFRFLWSIREPSKSKIYLPG-----E--YTNLKVKEMLPEG----------FLNRTAGVGL--SLWYGVPIAT 373 (456)
Q Consensus 313 ~~al~~~~~~~vw~~~~~~~~~~~~~~-----~--~~n~~~~~~lP~~----------f~~~~g~~G~--al~~GVP~v~ 373 (456)
+.+|+.++++|||+++.... .++. . ++|+++..|+||. |++|+|.+++ |+++|||||+
T Consensus 299 ~~~l~~~~~~~l~~~~~~~~---~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~ 375 (463)
T 2acv_A 299 ALGLKHSGVRFLWSNSAEKK---VFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILT 375 (463)
T ss_dssp HHHHHHHTCEEEEECCCCGG---GSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHhCCCcEEEEECCCcc---cCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeee
Confidence 99999999999999986300 1221 1 4677788899975 5566565555 9999999999
Q ss_pred cccccccchhHHHHHHhhcceEEe-cccccCCCCCc--ccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHHhhccCCCc
Q 039408 374 WPLYAEQQMNAFELVKELRLAVEI-RLDYRDGRGSD--LVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRTAVMEEGSS 450 (456)
Q Consensus 374 ~P~~~DQ~~na~~v~~~~G~G~~l-~~~~~~~~~~~--~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a~~~gGss 450 (456)
||+++||+.||+++++.||+|+.+ .... .+ .+++++|+++|+++|+++++||+||+++++.+++|+++||||
T Consensus 376 ~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-----~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss 450 (463)
T 2acv_A 376 WPIYAEQQLNAFRLVKEWGVGLGLRVDYR-----KGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSS 450 (463)
T ss_dssp CCCSTTHHHHHHHHHHTSCCEEESCSSCC-----TTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHH
T ss_pred ccchhhhHHHHHHHHHHcCeEEEEecccC-----CCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcH
Confidence 999999999999964446999999 3110 03 689999999999999635799999999999999999999999
Q ss_pred hhccC
Q 039408 451 NKSLG 455 (456)
Q Consensus 451 ~~~~~ 455 (456)
++||+
T Consensus 451 ~~~l~ 455 (463)
T 2acv_A 451 LISVG 455 (463)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 5
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.5e-56 Score=454.48 Aligned_cols=424 Identities=23% Similarity=0.333 Sum_probs=290.6
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCC--C-CCceEEEeCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTT--D-AHNINFVYLPSVD 77 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~--~-~~~i~~~~l~~~~ 77 (456)
|+++||+++|+|++||++||++||++|++|||+ |||++++ .+...+.+..... . .++++|+.+++..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~--VT~v~t~--------~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l 75 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFH--ITFVNTE--------YNHKRLLKSRGPKAFDGFTDFNFESIPDGL 75 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEEEH--------HHHHHHC------------CEEEEEECCCC
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCe--EEEEeCC--------chhhhhccccccccccCCCceEEEECCCCC
Confidence 456799999999999999999999999999988 9999986 2222221100000 0 1479999998643
Q ss_pred CCCC---CCC-CChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccH
Q 039408 78 PPSP---DQY-KSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPA 153 (456)
Q Consensus 78 ~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~ 153 (456)
|.. ... .+...++..+...+.+.+++.++.+.++ ....++||||+|.++.|+..+|+++|||++.++++++
T Consensus 76 -p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~----~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~ 150 (482)
T 2pq6_A 76 -TPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHS----TNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSA 150 (482)
T ss_dssp -C---------CCHHHHHHHHTTSSHHHHHHHHHHHHTC----SSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCH
T ss_pred -CCcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhh----ccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccH
Confidence 331 111 1222222222122233444444443210 0025899999999999999999999999999999998
Q ss_pred HHHHHHhhcccccccccccccccCCccccCCCC--CCce-ecCCCCCCCCCCCCChhhhccc--cccHHHHHHHHHhhcc
Q 039408 154 SFLGFMLHFPNIDAQIANEFVESNTDFFVPKDS--TTEL-VIPSFANPLPPSVLPSTVLKRK--RDGYVWYLRHAARYME 228 (456)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~p~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~ 228 (456)
.....+.+++.+...+..|... ..+ .... .... .+|+++ .++..+++..+.... ......+........+
T Consensus 151 ~~~~~~~~~~~~~~~~~~p~~~--~~~--~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (482)
T 2pq6_A 151 CSLLNVMHFRSFVERGIIPFKD--ESY--LTNGCLETKVDWIPGLK-NFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNK 225 (482)
T ss_dssp HHHHHHTTHHHHHHTTCSSCSS--GGG--GTSSGGGCBCCSSTTCC-SCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHhcCCCCCcc--ccc--cccccccCccccCCCCC-CCchHHCchhhccCCcccHHHHHHHHHHHhhcc
Confidence 8776655544332222222100 000 0000 0111 246654 455556665543210 1112333334455567
Q ss_pred CCeEEecccccccHHHHHHHHcCCCCCeEEecccccC-CCCC-----CC--CCCCCChhhHHhhhccCCCCeEEEEeccC
Q 039408 229 TEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDL-NGPA-----QW--HPDRVHHESIMKWLDDQPPSSVVFLCFGS 300 (456)
Q Consensus 229 ~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~-~~~~-----~~--~~~~~~~~~~~~wLd~~~~~~vVyvsfGS 300 (456)
++++++||+.+||++.++++++.. +++++|||++.. .... .. ...+..+.+|.+|||++++++||||||||
T Consensus 226 ~~~vl~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS 304 (482)
T 2pq6_A 226 DTTILLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGS 304 (482)
T ss_dssp TCCEEESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCS
T ss_pred CCEEEEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCC
Confidence 899999999999999999888755 889999999763 1110 00 00012345699999998888999999999
Q ss_pred CcCCCHHHHHHHHHHHHhcCCeEEEEEeCCC-CC-ccCCCC-----ccccccccccCchh----------HHhhcCCcee
Q 039408 301 MGSFVGPQLREIAIGLQRVGFRFLWSIREPS-KS-KIYLPG-----EYTNLKVKEMLPEG----------FLNRTAGVGL 363 (456)
Q Consensus 301 ~~~~~~~~~~~l~~al~~~~~~~vw~~~~~~-~~-~~~~~~-----~~~n~~~~~~lP~~----------f~~~~g~~G~ 363 (456)
+...+.+++.+++.+|++++++|||+++... .+ ...++. .++|+++..|+||. |++|+|.+++
T Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~ 384 (482)
T 2pq6_A 305 TTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNST 384 (482)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHH
T ss_pred cccCCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchH
Confidence 9888899999999999999999999998641 11 111231 24688889999975 5666665555
Q ss_pred --EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh---HHHHHHHHHHH
Q 039408 364 --SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD---EVRKKVKEMRE 438 (456)
Q Consensus 364 --al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~---~~r~~A~~l~~ 438 (456)
|+++|||+|+||+++||+.||+++++.||+|+.+. ..+++++|+++|+++|+ ++ +||+||+++++
T Consensus 385 ~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~~~~~~l~~~i~~ll~-~~~~~~~r~~a~~l~~ 454 (482)
T 2pq6_A 385 TESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID---------TNVKREELAKLINEVIA-GDKGKKMKQKAMELKK 454 (482)
T ss_dssp HHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC---------SSCCHHHHHHHHHHHHT-SHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC---------CCCCHHHHHHHHHHHHc-CCcHHHHHHHHHHHHH
Confidence 99999999999999999999999985469999997 25999999999999998 76 79999999999
Q ss_pred HHHHhhccCCCchhccC
Q 039408 439 KSRTAVMEEGSSNKSLG 455 (456)
Q Consensus 439 ~~~~a~~~gGss~~~~~ 455 (456)
++++|+++||||++|++
T Consensus 455 ~~~~a~~~gGss~~~l~ 471 (482)
T 2pq6_A 455 KAEENTRPGGCSYMNLN 471 (482)
T ss_dssp HHHHHTSTTCHHHHHHH
T ss_pred HHHHHHhcCCcHHHHHH
Confidence 99999999999999886
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1e-36 Score=307.15 Aligned_cols=372 Identities=16% Similarity=0.190 Sum_probs=239.2
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPS 80 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~ 80 (456)
|+++||++++++++||++|+++||++|+++||+ |||++++ .+.+.+. ..+++|++++... +.
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~--V~~~~~~--------~~~~~~~-------~~g~~~~~~~~~~-~~ 71 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHR--VSYAITD--------EFAAQVK-------AAGATPVVYDSIL-PK 71 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCE--EEEEECG--------GGHHHHH-------HHTCEEEECCCCS-CC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCe--EEEEeCH--------HHHHHHH-------hCCCEEEecCccc-cc
Confidence 566799999999999999999999999999988 9999986 2333332 2358888887542 22
Q ss_pred CC---C--CCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHH
Q 039408 81 PD---Q--YKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASF 155 (456)
Q Consensus 81 ~~---~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 155 (456)
+. + ..+....+..+.... ..+...+.++++. .+|||||+|.+..|+..+|+++|||++.+++.++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~-------~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~ 143 (424)
T 2iya_A 72 ESNPEESWPEDQESAMGLFLDEA-VRVLPQLEDAYAD-------DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAY 143 (424)
T ss_dssp TTCTTCCCCSSHHHHHHHHHHHH-HHHHHHHHHHTTT-------SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCC
T ss_pred cccchhhcchhHHHHHHHHHHHH-HHHHHHHHHHHhc-------cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccc
Confidence 21 1 012222222222222 2222334445432 689999999998999999999999999998776421
Q ss_pred HHHHhhcccccccccccccccCCccccCCCCCCceecCC-CCCCCCCCC-CChhhhccccccHHHHHHH-------HHhh
Q 039408 156 LGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPS-FANPLPPSV-LPSTVLKRKRDGYVWYLRH-------AARY 226 (456)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~-l~~~~~~~~~~~~~~~~~~-------~~~~ 226 (456)
......++. ...+ + .+.......|. ......... .+. ... .......+... ....
T Consensus 144 ~~~~~~~~~-~~~~----------~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~~~~~~~~~ 207 (424)
T 2iya_A 144 EGFEEDVPA-VQDP----------T---ADRGEEAAAPAGTGDAEEGAEAEDG-LVR-FFTRLSAFLEEHGVDTPATEFL 207 (424)
T ss_dssp TTHHHHSGG-GSCC----------C---C---------------------HHH-HHH-HHHHHHHHHHHTTCCSCHHHHH
T ss_pred ccccccccc-cccc----------c---cccccccccccccccchhhhccchh-HHH-HHHHHHHHHHHcCCCCCHHHhc
Confidence 111000000 0000 0 00000000000 000000000 000 000 00000111100 0111
Q ss_pred ccCCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCH
Q 039408 227 METEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVG 306 (456)
Q Consensus 227 ~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~ 306 (456)
...+.++++++.+++++. ..+++++++|||+..... +..+|++.++++++|||+|||+.....
T Consensus 208 ~~~~~~l~~~~~~l~~~~-----~~~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~ 270 (424)
T 2iya_A 208 IAPNRCIVALPRTFQIKG-----DTVGDNYTFVGPTYGDRS------------HQGTWEGPGDGRPVLLIALGSAFTDHL 270 (424)
T ss_dssp HCCSSEEESSCTTTSTTG-----GGCCTTEEECCCCCCCCG------------GGCCCCCCCSSCCEEEEECCSSSCCCH
T ss_pred cCCCcEEEEcchhhCCCc-----cCCCCCEEEeCCCCCCcc------------cCCCCCccCCCCCEEEEEcCCCCcchH
Confidence 246778999999888642 225678999999764211 134688766678899999999986667
Q ss_pred HHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee--EEeeCcceecccc
Q 039408 307 PQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL--SLWYGVPIATWPL 376 (456)
Q Consensus 307 ~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~--al~~GVP~v~~P~ 376 (456)
+.+.+++++|+..+.+++|.++...... .+...++|+++.+|+|+. |++|+|.+.+ |+++|||+|++|.
T Consensus 271 ~~~~~~~~al~~~~~~~~~~~g~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~ 349 (424)
T 2iya_A 271 DFYRTCLSAVDGLDWHVVLSVGRFVDPA-DLGEVPPNVEVHQWVPQLDILTKASAFITHAGMGSTMEALSNAVPMVAVPQ 349 (424)
T ss_dssp HHHHHHHHHHTTCSSEEEEECCTTSCGG-GGCSCCTTEEEESSCCHHHHHTTCSEEEECCCHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHHhcCCcEEEEEECCcCChH-HhccCCCCeEEecCCCHHHHHhhCCEEEECCchhHHHHHHHcCCCEEEecC
Confidence 8889999999988899999887642110 122346789889999875 4445443333 9999999999999
Q ss_pred ccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 377 YAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 377 ~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
+.||+.||+++++. |+|+.+.. +.++.++|+++|+++|+ |++||++++++++.+++
T Consensus 350 ~~dQ~~na~~l~~~-g~g~~~~~--------~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 350 IAEQTMNAERIVEL-GLGRHIPR--------DQVTAEKLREAVLAVAS-DPGVAERLAAVRQEIRE 405 (424)
T ss_dssp SHHHHHHHHHHHHT-TSEEECCG--------GGCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHC-CCEEEcCc--------CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHh
Confidence 99999999999986 99999874 36899999999999998 89999999999999874
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=4.2e-36 Score=300.02 Aligned_cols=336 Identities=17% Similarity=0.177 Sum_probs=206.0
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCC----
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVD---- 77 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~---- 77 (456)
+.+||+|+++|+.||++|+++||++|++|||+ |||+|++ .+.... ..++.++.+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~--Vt~~t~~--------~~~~~~--------~~g~~~~~~~~~~~~~~ 82 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHE--VRYATGG--------DIRAVA--------EAGLCAVDVSPGVNYAK 82 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEECS--------STHHHH--------TTTCEEEESSTTCCSHH
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCE--EEEEeCc--------chhhHH--------hcCCeeEecCCchhHhh
Confidence 35789999999999999999999999999998 9999976 222222 2357777664321
Q ss_pred --CCCCCCC-------CChHHHHHH-HHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEE
Q 039408 78 --PPSPDQY-------KSTLGYLSL-FIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYL 147 (456)
Q Consensus 78 --~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~ 147 (456)
.+..... ......+.. +.......+... .++++. .+||+||+|.+.+++..+|+++|||++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~-------~~pD~Vv~d~~~~~~~~~A~~~gip~~~ 154 (400)
T 4amg_A 83 LFVPDDTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGA-LRTARS-------WRPDLVVHTPTQGAGPLTAAALQLPCVE 154 (400)
T ss_dssp HHSCCC------------CHHHHHHHHHHHHHHHHHHH-HHHHHH-------HCCSEEEECTTCTHHHHHHHHTTCCEEE
T ss_pred hccccccccccccchhhhhHHHHHHHHHHHHHHHHHHH-HHHHHh-------cCCCEEEECcchHHHHHHHHHcCCCcee
Confidence 0111000 000111111 111111222222 233333 4899999999999999999999999998
Q ss_pred EecccHHHHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhc
Q 039408 148 YFASPASFLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYM 227 (456)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 227 (456)
+...+......+.... . .. + . ......++. . .
T Consensus 155 ~~~~~~~~~~~~~~~~--~--~~---------l---~---~~~~~~~~~----~-------------------------~ 186 (400)
T 4amg_A 155 LPLGPADSEPGLGALI--R--RA---------M---S---KDYERHGVT----G-------------------------E 186 (400)
T ss_dssp CCSSTTTCCHHHHHHH--H--HH---------T---H---HHHHHTTCC----C-------------------------C
T ss_pred ecccccccccchhhHH--H--HH---------H---H---HHHHHhCCC----c-------------------------c
Confidence 7655432110000000 0 00 0 0 000000000 0 0
Q ss_pred cCCeEEecccccccHHHHHHHH--cCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCC
Q 039408 228 ETEGIVVNTFQELEPYAIESIS--VNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFV 305 (456)
Q Consensus 228 ~~~~~l~~s~~~le~~~~~~~~--~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~ 305 (456)
.......... +....... ....+..+++.+.... ....+.+||+..+++++|||||||+....
T Consensus 187 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~ 251 (400)
T 4amg_A 187 PTGSVRLTTT----PPSVEALLPEDRRSPGAWPMRYVPYN-----------GGAVLPDWLPPAAGRRRIAVTLGSIDALS 251 (400)
T ss_dssp CSCEEEEECC----CHHHHHTSCGGGCCTTCEECCCCCCC-----------CCEECCTTCSCCTTCCEEEECCCSCC--C
T ss_pred cccchhhccc----CchhhccCcccccCCcccCccccccc-----------ccccCcccccccCCCcEEEEeCCcccccC
Confidence 0000000000 00000000 0012334444433221 22334579998888999999999986543
Q ss_pred --HHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee--EEeeCcceec
Q 039408 306 --GPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL--SLWYGVPIAT 373 (456)
Q Consensus 306 --~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~--al~~GVP~v~ 373 (456)
.+++.++++++++.+.++||..+..... .....++|+++..|+|+. |++|+|.+++ |+++|||+|+
T Consensus 252 ~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~--~~~~~~~~v~~~~~~p~~~lL~~~~~~v~h~G~~s~~Eal~~GvP~v~ 329 (400)
T 4amg_A 252 GGIAKLAPLFSEVADVDAEFVLTLGGGDLA--LLGELPANVRVVEWIPLGALLETCDAIIHHGGSGTLLTALAAGVPQCV 329 (400)
T ss_dssp CSSSTTHHHHHHGGGSSSEEEEECCTTCCC--CCCCCCTTEEEECCCCHHHHHTTCSEEEECCCHHHHHHHHHHTCCEEE
T ss_pred ccHHHHHHHHHHhhccCceEEEEecCcccc--ccccCCCCEEEEeecCHHHHhhhhhheeccCCccHHHHHHHhCCCEEE
Confidence 3568899999999999999998765221 134467899999999975 5656555555 9999999999
Q ss_pred cccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 374 WPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 374 ~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
+|+++||+.||+++++. |+|+.++. ...++ ++|+++|+ |++||+||+++++++++
T Consensus 330 ~P~~~dQ~~na~~v~~~-G~g~~l~~--------~~~~~----~al~~lL~-d~~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 330 IPHGSYQDTNRDVLTGL-GIGFDAEA--------GSLGA----EQCRRLLD-DAGLREAALRVRQEMSE 384 (400)
T ss_dssp CCC---CHHHHHHHHHH-TSEEECCT--------TTCSH----HHHHHHHH-CHHHHHHHHHHHHHHHT
T ss_pred ecCcccHHHHHHHHHHC-CCEEEcCC--------CCchH----HHHHHHHc-CHHHHHHHHHHHHHHHc
Confidence 99999999999999997 99999884 34554 46778898 99999999999999985
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.9e-34 Score=289.82 Aligned_cols=351 Identities=15% Similarity=0.134 Sum_probs=224.6
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCCC
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPDQ 83 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 83 (456)
+||++++.++.||++|+++||++|+++||+ |||++++ .+.+.+. ..+++|+.++.... ...+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~--V~~~~~~--------~~~~~v~-------~~g~~~~~i~~~~~-~~~~ 62 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGAD--VRMCAPP--------DCAERLA-------EVGVPHVPVGPSAR-APIQ 62 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCE--EEEEECG--------GGHHHHH-------HTTCCEEECCC--------
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCe--EEEEcCH--------HHHHHHH-------HcCCeeeeCCCCHH-HHhh
Confidence 369999999999999999999999999988 9999986 2223232 23688888875421 1111
Q ss_pred --CCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcC-CCcc--HHHHHHHhCCCeEEEecccHHHHHH
Q 039408 84 --YKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDM-FCTS--MTDVANQLGIPCYLYFASPASFLGF 158 (456)
Q Consensus 84 --~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~ 158 (456)
.......+..++ ...+...++++.+. ..+|||||+|. +..| +..+|+++|||++.++.+++....
T Consensus 63 ~~~~~~~~~~~~~~---~~~~~~~~~~l~~~------~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~- 132 (415)
T 1iir_A 63 RAKPLTAEDVRRFT---TEAIATQFDEIPAA------AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS- 132 (415)
T ss_dssp CCSCCCHHHHHHHH---HHHHHHHHHHHHHH------TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-
T ss_pred cccccchHHHHHHH---HHHHHHHHHHHHHH------hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-
Confidence 011111121222 12234445555431 25899999998 7778 899999999999999877642100
Q ss_pred HhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhh------------
Q 039408 159 MLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARY------------ 226 (456)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------ 226 (456)
...| . ....+.+|+ ....+.+...+.. ...+..+....+..
T Consensus 133 ----------~~~p-----------~-~~~~~~~~~---~~~~n~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~ 185 (415)
T 1iir_A 133 ----------PYYP-----------P-PPLGEPSTQ---DTIDIPAQWERNN--QSAYQRYGGLLNSHRDAIGLPPVEDI 185 (415)
T ss_dssp ----------SSSC-----------C-CC------------CHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTCCCCCCH
T ss_pred ----------cccC-----------C-ccCCccccc---hHHHHHHHHHHHH--HHHHHHhHHHHHHHHHHcCCCCCCcc
Confidence 0001 0 000000000 0000000000000 00000011101000
Q ss_pred ----ccCCeEEecccccccH-HHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCC
Q 039408 227 ----METEGIVVNTFQELEP-YAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSM 301 (456)
Q Consensus 227 ----~~~~~~l~~s~~~le~-~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~ 301 (456)
... .+++|+..++++ + +. .. ++++|||++.... ...+.++.+||+++ +++|||+|||+
T Consensus 186 ~~~~~~~-~~l~~~~~~l~~~~-----~~-~~-~~~~vG~~~~~~~-------~~~~~~~~~~l~~~--~~~v~v~~Gs~ 248 (415)
T 1iir_A 186 FTFGYTD-HPWVAADPVLAPLQ-----PT-DL-DAVQTGAWILPDE-------RPLSPELAAFLDAG--PPPVYLGFGSL 248 (415)
T ss_dssp HHHHHCS-SCEECSCTTTSCCC-----CC-SS-CCEECCCCCCCCC-------CCCCHHHHHHHHTS--SCCEEEECC--
T ss_pred ccccCCC-CEEEeeChhhcCCC-----cc-cC-CeEeeCCCccCcc-------cCCCHHHHHHHhhC--CCeEEEeCCCC
Confidence 112 467888887774 2 11 11 7899999976432 13467899999875 47899999998
Q ss_pred cCCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee--EEeeCcce
Q 039408 302 GSFVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL--SLWYGVPI 371 (456)
Q Consensus 302 ~~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~--al~~GVP~ 371 (456)
. ...+.++.++++|+..+.+++|+++..... ....++|+++.+|+|+. |++|+|...+ |+++|||+
T Consensus 249 ~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~---~~~~~~~v~~~~~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~ 324 (415)
T 1iir_A 249 G-APADAVRVAIDAIRAHGRRVILSRGWADLV---LPDDGADCFAIGEVNHQVLFGRVAAVIHHGGAGTTHVAARAGAPQ 324 (415)
T ss_dssp --CCHHHHHHHHHHHHHTTCCEEECTTCTTCC---CSSCGGGEEECSSCCHHHHGGGSSEEEECCCHHHHHHHHHHTCCE
T ss_pred C-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc---ccCCCCCEEEeCcCChHHHHhhCCEEEeCCChhHHHHHHHcCCCE
Confidence 7 566778889999999999999988765211 12345788889999975 5555444333 99999999
Q ss_pred eccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 372 ATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 372 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
|++|++.||+.||+++++. |+|+.++. ..++.++|+++|+++ . |++||++++++++.++
T Consensus 325 i~~p~~~dQ~~na~~l~~~-g~g~~~~~--------~~~~~~~l~~~i~~l-~-~~~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 325 ILLPQMADQPYYAGRVAEL-GVGVAHDG--------PIPTFDSLSAALATA-L-TPETHARATAVAGTIR 383 (415)
T ss_dssp EECCCSTTHHHHHHHHHHH-TSEEECSS--------SSCCHHHHHHHHHHH-T-SHHHHHHHHHHHHHSC
T ss_pred EECCCCCccHHHHHHHHHC-CCcccCCc--------CCCCHHHHHHHHHHH-c-CHHHHHHHHHHHHHHh
Confidence 9999999999999999886 99998874 368999999999999 7 8999999999887764
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5e-33 Score=279.55 Aligned_cols=350 Identities=15% Similarity=0.102 Sum_probs=226.4
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCC--CC
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPP--SP 81 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~--~~ 81 (456)
+||++++.++.||++|+++||++|+++||+ |+|++++ .+.+.+. ..+++|++++..... ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~--V~~~~~~--------~~~~~v~-------~~g~~~~~~~~~~~~~~~~ 63 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQ--TRMCAPP--------AAEERLA-------EVGVPHVPVGLPQHMMLQE 63 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCE--EEEEECG--------GGHHHHH-------HHTCCEEECSCCGGGCCCT
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCe--EEEEeCH--------HHHHHHH-------HcCCeeeecCCCHHHHHhh
Confidence 369999999999999999999999999988 9999976 2233232 235888888754200 00
Q ss_pred CCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcC-CCcc--HHHHHHHhCCCeEEEecccHHHHHH
Q 039408 82 DQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDM-FCTS--MTDVANQLGIPCYLYFASPASFLGF 158 (456)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~ 158 (456)
.........+..++. ..+...++.+.+. ..+|||||+|. +.++ +..+|+++|||++.++.++.....
T Consensus 64 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~~------~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~- 133 (416)
T 1rrv_A 64 GMPPPPPEEEQRLAA---MTVEMQFDAVPGA------AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS- 133 (416)
T ss_dssp TSCCCCHHHHHHHHH---HHHHHHHHHHHHH------TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-
T ss_pred ccccchhHHHHHHHH---HHHHHHHHHHHHH------hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-
Confidence 000111111222221 2223444444421 14899999997 4566 788999999999998766532100
Q ss_pred HhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhcc-cc-c-------cHHHHHHHH------
Q 039408 159 MLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKR-KR-D-------GYVWYLRHA------ 223 (456)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~-~~-~-------~~~~~~~~~------ 223 (456)
.. + + |.++.++....+...+... .. . ..+.+.+.+
T Consensus 134 ----------~~---------~---p--------~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 183 (416)
T 1rrv_A 134 ----------PH---------L---P--------PAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVE 183 (416)
T ss_dssp ----------SS---------S---C--------CCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred ----------cc---------c---C--------CCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCC
Confidence 00 0 0 0000000000011111000 00 0 000111000
Q ss_pred ---HhhccCCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccC
Q 039408 224 ---ARYMETEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGS 300 (456)
Q Consensus 224 ---~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS 300 (456)
...... .+++|+..+++++. . . .++++|||++.... ...+.++.+||+++ +++|||+|||
T Consensus 184 ~~~~~~~~~-~~l~~~~~~l~~~~-----~-~-~~~~~vG~~~~~~~-------~~~~~~~~~~l~~~--~~~v~v~~Gs 246 (416)
T 1rrv_A 184 DVFGYGHGE-RPLLAADPVLAPLQ-----P-D-VDAVQTGAWLLSDE-------RPLPPELEAFLAAG--SPPVHIGFGS 246 (416)
T ss_dssp CHHHHTTCS-SCEECSCTTTSCCC-----S-S-CCCEECCCCCCCCC-------CCCCHHHHHHHHSS--SCCEEECCTT
T ss_pred chhhhccCC-CeEEccCccccCCC-----C-C-CCeeeECCCccCcc-------CCCCHHHHHHHhcC--CCeEEEecCC
Confidence 011122 57888888887521 1 1 27899999976432 13467899999875 4789999999
Q ss_pred CcC-CCHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee--EEeeCc
Q 039408 301 MGS-FVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL--SLWYGV 369 (456)
Q Consensus 301 ~~~-~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~--al~~GV 369 (456)
+.. ...+.+.+++++|+..+.+++|+++..... ....++|+++.+|+|+. |++|+|.+.+ |+++||
T Consensus 247 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~---~~~~~~~v~~~~~~~~~~ll~~~d~~v~~~G~~t~~Ea~~~G~ 323 (416)
T 1rrv_A 247 SSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV---LPDDRDDCFAIDEVNFQALFRRVAAVIHHGSAGTEHVATRAGV 323 (416)
T ss_dssp CCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC---CSCCCTTEEEESSCCHHHHGGGSSEEEECCCHHHHHHHHHHTC
T ss_pred CCccChHHHHHHHHHHHHHCCCeEEEEeCCcccc---ccCCCCCEEEeccCChHHHhccCCEEEecCChhHHHHHHHcCC
Confidence 864 345667889999999999999998765211 12346788889999864 5555444333 999999
Q ss_pred ceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 370 PIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 370 P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
|+|++|++.||+.||+++++. |+|+.+.. ..++.++|+++|+++ . |++||++++++++.++
T Consensus 324 P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~--------~~~~~~~l~~~i~~l-~-~~~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 324 PQLVIPRNTDQPYFAGRVAAL-GIGVAHDG--------PTPTFESLSAALTTV-L-APETRARAEAVAGMVL 384 (416)
T ss_dssp CEEECCCSBTHHHHHHHHHHH-TSEEECSS--------SCCCHHHHHHHHHHH-T-SHHHHHHHHHHTTTCC
T ss_pred CEEEccCCCCcHHHHHHHHHC-CCccCCCC--------CCCCHHHHHHHHHHh-h-CHHHHHHHHHHHHHHh
Confidence 999999999999999999986 99998874 368999999999999 7 9999999998876554
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.97 E-value=1.3e-31 Score=268.18 Aligned_cols=346 Identities=15% Similarity=0.112 Sum_probs=216.4
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCC-CCC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPS-PDQ 83 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~~ 83 (456)
||+|++.++.||++|++.||++|.++||+ |+|++++ .+.+.+. ..+++|+.++...... ...
T Consensus 2 rIli~~~gt~Ghv~p~~~La~~L~~~Gh~--V~v~~~~--------~~~~~v~-------~~g~~~~~l~~~~~~~~~~~ 64 (404)
T 3h4t_A 2 GVLITGCGSRGDTEPLVALAARLRELGAD--ARMCLPP--------DYVERCA-------EVGVPMVPVGRAVRAGAREP 64 (404)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHTTCC--EEEEECG--------GGHHHHH-------HTTCCEEECSSCSSGGGSCT
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHCCCe--EEEEeCH--------HHHHHHH-------HcCCceeecCCCHHHHhccc
Confidence 59999999999999999999999999999 9999976 3333333 2368888886432110 000
Q ss_pred CCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccH---HHHHHHhCCCeEEEecccHHHHHHHh
Q 039408 84 YKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSM---TDVANQLGIPCYLYFASPASFLGFML 160 (456)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~ 160 (456)
..........+.......+ +.+.+++ .+||+||+|....++ ..+|+++|||++.+..++....+..+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~l~~~~---------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~ 134 (404)
T 3h4t_A 65 GELPPGAAEVVTEVVAEWF-DKVPAAI---------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQS 134 (404)
T ss_dssp TCCCTTCGGGHHHHHHHHH-HHHHHHH---------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSC
T ss_pred cCCHHHHHHHHHHHHHHHH-HHHHHHh---------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhH
Confidence 0011000011111111112 2222232 269999999765544 68899999999988766642100000
Q ss_pred hcc-ccccc---ccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEecc
Q 039408 161 HFP-NIDAQ---IANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNT 236 (456)
Q Consensus 161 ~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 236 (456)
+.. .+... .... ..+ . ....--+++ + ..... .. ...+..+.+.
T Consensus 135 ~~~~~~~~~~~~~~~~-----~~~---~---~~~~~lgl~-~-----~~~~~---------------~~-~~~~~~l~~~ 181 (404)
T 3h4t_A 135 QAERDMYNQGADRLFG-----DAV---N---SHRASIGLP-P-----VEHLY---------------DY-GYTDQPWLAA 181 (404)
T ss_dssp HHHHHHHHHHHHHHHH-----HHH---H---HHHHHTTCC-C-----CCCHH---------------HH-HHCSSCEECS
T ss_pred HHHHHHHHHHHHHHhH-----HHH---H---HHHHHcCCC-C-----Ccchh---------------hc-cccCCeEEee
Confidence 000 00000 0000 000 0 000000110 0 00000 00 0011123344
Q ss_pred cccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHHH
Q 039408 237 FQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGL 316 (456)
Q Consensus 237 ~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~al 316 (456)
...+.+. ..+.++++.+|+++.+... ..++++.+||++ .+++|||+|||+.. ..+.+..++++|
T Consensus 182 ~~~l~p~------~~~~~~~~~~G~~~~~~~~-------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al 245 (404)
T 3h4t_A 182 DPVLSPL------RPTDLGTVQTGAWILPDQR-------PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAV 245 (404)
T ss_dssp CTTTSCC------CTTCCSCCBCCCCCCCCCC-------CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHH
T ss_pred CcceeCC------CCCCCCeEEeCccccCCCC-------CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHH
Confidence 3333321 1234578889987654321 456789999985 35789999999977 667788999999
Q ss_pred HhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee---EEeeCcceeccccccccchhHH
Q 039408 317 QRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL---SLWYGVPIATWPLYAEQQMNAF 385 (456)
Q Consensus 317 ~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~---al~~GVP~v~~P~~~DQ~~na~ 385 (456)
++.+.++||+.+..... ....++|+++.+|+|+. |++| +|.|+ ++++|||+|++|+++||+.||+
T Consensus 246 ~~~~~~vv~~~g~~~~~---~~~~~~~v~~~~~~~~~~ll~~~d~~v~~-gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~ 321 (404)
T 3h4t_A 246 RAQGRRVVLSSGWAGLG---RIDEGDDCLVVGEVNHQVLFGRVAAVVHH-GGAGTTTAVTRAGAPQVVVPQKADQPYYAG 321 (404)
T ss_dssp HHTTCCEEEECTTTTCC---CSSCCTTEEEESSCCHHHHGGGSSEEEEC-CCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred HhCCCEEEEEeCCcccc---cccCCCCEEEecCCCHHHHHhhCcEEEEC-CcHHHHHHHHHcCCCEEEcCCcccHHHHHH
Confidence 99999999998764211 12346899889999975 3333 34444 9999999999999999999999
Q ss_pred HHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 386 ELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 386 ~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
++++. |+|+.+.. +.++.++|.++|+++|+ ++||++++++++.++
T Consensus 322 ~~~~~-G~g~~l~~--------~~~~~~~l~~ai~~ll~--~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 322 RVADL-GVGVAHDG--------PTPTVESLSAALATALT--PGIRARAAAVAGTIR 366 (404)
T ss_dssp HHHHH-TSEEECSS--------SSCCHHHHHHHHHHHTS--HHHHHHHHHHHTTCC
T ss_pred HHHHC-CCEeccCc--------CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHh
Confidence 99997 99999875 46899999999999995 899999999887654
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.97 E-value=7.3e-30 Score=256.19 Aligned_cols=351 Identities=14% Similarity=0.137 Sum_probs=226.7
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPD 82 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~ 82 (456)
++||+++++++.||++|++.||++|.++||+ |+|++++ .+.+.+. ..+++|+.++... +...
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~--V~v~~~~--------~~~~~~~-------~~G~~~~~~~~~~-~~~~ 81 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHR--VSYVTAG--------GFAEPVR-------AAGATVVPYQSEI-IDAD 81 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCE--EEEEECG--------GGHHHHH-------HTTCEEEECCCST-TTCC
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCE--EEEEeCH--------HHHHHHH-------hcCCEEEeccccc-cccc
Confidence 3579999999999999999999999999988 9999975 3444443 2368888887543 1110
Q ss_pred C-----CCChHHHHHH-HHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEc-CCCccHHHHHHHhCCCeEEEecccHHH
Q 039408 83 Q-----YKSTLGYLSL-FIEKHKPHVKNEITNLIETESDSEDSDRVAGLFID-MFCTSMTDVANQLGIPCYLYFASPASF 155 (456)
Q Consensus 83 ~-----~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~ 155 (456)
. .......+.. +.......+ ..+.++++ ..+||+||+| ...+++..+|+++|||++.+.+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~-------~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~ 153 (415)
T 3rsc_A 82 AAEVFGSDDLGVRPHLMYLRENVSVL-RATAEALD-------GDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN 153 (415)
T ss_dssp HHHHHHSSSSCHHHHHHHHHHHHHHH-HHHHHHHS-------SSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cchhhccccHHHHHHHHHHHHHHHHH-HHHHHHHh-------ccCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc
Confidence 0 0111112222 232222223 23344443 2689999999 888889999999999999886443210
Q ss_pred HHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHH-------Hhhcc
Q 039408 156 LGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHA-------ARYME 228 (456)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~ 228 (456)
. .+... ... .+... ...+...... ......+.... .....
T Consensus 154 ~----~~~~~--~~~---------------------~~~~~-----~~~p~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 200 (415)
T 3rsc_A 154 E----HYSFS--QDM---------------------VTLAG-----TIDPLDLPVF-RDTLRDLLAEHGLSRSVVDCWNH 200 (415)
T ss_dssp S----SCCHH--HHH---------------------HHHHT-----CCCGGGCHHH-HHHHHHHHHHTTCCCCHHHHHTC
T ss_pred C----ccccc--ccc---------------------ccccc-----cCChhhHHHH-HHHHHHHHHHcCCCCChhhhhcC
Confidence 0 00000 000 00000 0000000000 00000000000 00111
Q ss_pred -CCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHH
Q 039408 229 -TEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGP 307 (456)
Q Consensus 229 -~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~ 307 (456)
.+..++.+...++. .....+.++.++||+..... +..+|+...+++++|||++||......+
T Consensus 201 ~~~~~l~~~~~~~~~-----~~~~~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~ 263 (415)
T 3rsc_A 201 VEQLNLVFVPKAFQI-----AGDTFDDRFVFVGPCFDDRR------------FLGEWTRPADDLPVVLVSLGTTFNDRPG 263 (415)
T ss_dssp CCSEEEESSCTTTST-----TGGGCCTTEEECCCCCCCCG------------GGCCCCCCSSCCCEEEEECTTTSCCCHH
T ss_pred CCCeEEEEcCcccCC-----CcccCCCceEEeCCCCCCcc------------cCcCccccCCCCCEEEEECCCCCCChHH
Confidence 14455555444442 22234567899998865321 2335665555778999999999777777
Q ss_pred HHHHHHHHHHhcCCeEEEEEeCC-CCCccCCCCccccccccccCchh--------HHhhcCCcee---EEeeCcceeccc
Q 039408 308 QLREIAIGLQRVGFRFLWSIREP-SKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL---SLWYGVPIATWP 375 (456)
Q Consensus 308 ~~~~l~~al~~~~~~~vw~~~~~-~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~---al~~GVP~v~~P 375 (456)
.+..+++++++.+.+++|.++.. ... .+...++|+++.+|+|+. +++| +|.|+ ++++|+|+|++|
T Consensus 264 ~~~~~~~al~~~~~~~v~~~g~~~~~~--~l~~~~~~v~~~~~~~~~~ll~~ad~~v~~-~G~~t~~Ea~~~G~P~v~~p 340 (415)
T 3rsc_A 264 FFRDCARAFDGQPWHVVMTLGGQVDPA--ALGDLPPNVEAHRWVPHVKVLEQATVCVTH-GGMGTLMEALYWGRPLVVVP 340 (415)
T ss_dssp HHHHHHHHHTTSSCEEEEECTTTSCGG--GGCCCCTTEEEESCCCHHHHHHHEEEEEES-CCHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHhcCCcEEEEEeCCCCChH--HhcCCCCcEEEEecCCHHHHHhhCCEEEEC-CcHHHHHHHHHhCCCEEEeC
Confidence 88999999999889999988764 211 123356788888998865 3333 34344 999999999999
Q ss_pred cccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 376 LYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 376 ~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
...||+.||+++++. |+|+.+.. +.++.++|+++|+++|+ |+++|++++++++.+++
T Consensus 341 ~~~~q~~~a~~l~~~-g~g~~~~~--------~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 341 QSFDVQPMARRVDQL-GLGAVLPG--------EKADGDTLLAAVGAVAA-DPALLARVEAMRGHVRR 397 (415)
T ss_dssp CSGGGHHHHHHHHHH-TCEEECCG--------GGCCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHc-CCEEEccc--------CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHh
Confidence 999999999999998 99999885 46899999999999998 99999999999998874
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.97 E-value=1.4e-29 Score=252.63 Aligned_cols=355 Identities=16% Similarity=0.164 Sum_probs=226.8
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCC-C
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDP-P 79 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-~ 79 (456)
|+.+||+++++++.||++|++.||++|.++||+ |+|++++ .+.+.+. ..+++|+.++.... .
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~Ghe--V~v~~~~--------~~~~~~~-------~~G~~~~~~~~~~~~~ 64 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHR--ITYVTTP--------LFADEVK-------AAGAEVVLYKSEFDTF 64 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEECH--------HHHHHHH-------HTTCEEEECCCGGGTS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCE--EEEEcCH--------HHHHHHH-------HcCCEEEecccccccc
Confidence 665689999999999999999999999999988 9999975 3444443 34688888864320 0
Q ss_pred CC---CCCCChHHHHHH-HHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEc-CCCccHHHHHHHhCCCeEEEecccHH
Q 039408 80 SP---DQYKSTLGYLSL-FIEKHKPHVKNEITNLIETESDSEDSDRVAGLFID-MFCTSMTDVANQLGIPCYLYFASPAS 154 (456)
Q Consensus 80 ~~---~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~ 154 (456)
.+ ....+....+.. +.......+.. +.++++. .+||+||+| .+.+++..+|+++|||++.+.+....
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~-------~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~ 136 (402)
T 3ia7_A 65 HVPEVVKQEDAETQLHLVYVRENVAILRA-AEEALGD-------NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAA 136 (402)
T ss_dssp SSSSSSCCTTHHHHHHHHHHHHHHHHHHH-HHHHHTT-------CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCC
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHH-HHHHHhc-------cCCCEEEECchHHHHHHHHHHhhCCCEEEEeccccc
Confidence 01 111222222333 33322222333 3444432 699999999 88888999999999999988644321
Q ss_pred HHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHH-------HHhhc
Q 039408 155 FLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRH-------AARYM 227 (456)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~ 227 (456)
+... ...+.+.... .. ..+..+... ......+... .....
T Consensus 137 ~~~~-~~~~~~~~~~-----------------------~~--------~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~ 183 (402)
T 3ia7_A 137 NEHY-SLFKELWKSN-----------------------GQ--------RHPADVEAV-HSVLVDLLGKYGVDTPVKEYWD 183 (402)
T ss_dssp BTTB-CHHHHHHHHH-----------------------TC--------CCGGGSHHH-HHHHHHHHHTTTCCSCHHHHHT
T ss_pred Cccc-cccccccccc-----------------------cc--------cChhhHHHH-HHHHHHHHHHcCCCCChhhhhc
Confidence 1000 0000000000 00 000000000 0000000000 00011
Q ss_pred c-CCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCH
Q 039408 228 E-TEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVG 306 (456)
Q Consensus 228 ~-~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~ 306 (456)
. .+..++.+..+++.. ....+.++.++||...... +...|+...+++++|||++||......
T Consensus 184 ~~~~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~G~~~~~~~ 246 (402)
T 3ia7_A 184 EIEGLTIVFLPKSFQPF-----AETFDERFAFVGPTLTGRD------------GQPGWQPPRPDAPVLLVSLGNQFNEHP 246 (402)
T ss_dssp CCCSCEEESSCGGGSTT-----GGGCCTTEEECCCCCCC----------------CCCCCSSTTCCEEEEECCSCSSCCH
T ss_pred CCCCeEEEEcChHhCCc-----cccCCCCeEEeCCCCCCcc------------cCCCCcccCCCCCEEEEECCCCCcchH
Confidence 1 144455444444421 2224567999998865321 223466555567899999999987777
Q ss_pred HHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee---EEeeCcceeccc
Q 039408 307 PQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL---SLWYGVPIATWP 375 (456)
Q Consensus 307 ~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~---al~~GVP~v~~P 375 (456)
+.+.+++++++..+.+++|.++..... ..+...++|+++.+|+|+. +++| +|.|+ ++++|+|+|++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~~~~~~~~~~ll~~ad~~v~~-~G~~t~~Ea~~~G~P~v~~p 324 (402)
T 3ia7_A 247 EFFRACAQAFADTPWHVVMAIGGFLDP-AVLGPLPPNVEAHQWIPFHSVLAHARACLTH-GTTGAVLEAFAAGVPLVLVP 324 (402)
T ss_dssp HHHHHHHHHHTTSSCEEEEECCTTSCG-GGGCSCCTTEEEESCCCHHHHHTTEEEEEEC-CCHHHHHHHHHTTCCEEECG
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCcCCh-hhhCCCCCcEEEecCCCHHHHHhhCCEEEEC-CCHHHHHHHHHhCCCEEEeC
Confidence 788999999999888999988764110 1123356788888888865 3333 33344 999999999999
Q ss_pred c-ccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 376 L-YAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 376 ~-~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
. ..||+.|++++++. |+|+.+.. +.++.++|+++|+++|+ |+++|++++++++.+.+
T Consensus 325 ~~~~~q~~~a~~~~~~-g~g~~~~~--------~~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~ 382 (402)
T 3ia7_A 325 HFATEAAPSAERVIEL-GLGSVLRP--------DQLEPASIREAVERLAA-DSAVRERVRRMQRDILS 382 (402)
T ss_dssp GGCGGGHHHHHHHHHT-TSEEECCG--------GGCSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHT
T ss_pred CCcccHHHHHHHHHHc-CCEEEccC--------CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHhh
Confidence 9 99999999999997 99999885 46899999999999998 99999999999988763
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.97 E-value=1.7e-29 Score=254.76 Aligned_cols=354 Identities=16% Similarity=0.171 Sum_probs=223.9
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPS 80 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~ 80 (456)
|+.+||++++.++.||++|++.|+++|+++||+ |+++++. .+.+.+. ..+++++.++... +.
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~--V~~~~~~--------~~~~~~~-------~~g~~~~~~~~~~-~~ 66 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHR--VTYAIPP--------VFADKVA-------ATGPRPVLYHSTL-PG 66 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCE--EEEEECG--------GGHHHHH-------TTSCEEEECCCCS-CC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCe--EEEEeCH--------HHHHHHH-------hCCCEEEEcCCcC-cc
Confidence 344689999999999999999999999999988 9999976 2333332 3468888887542 11
Q ss_pred CCC-----CCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEecccHHH
Q 039408 81 PDQ-----YKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYFASPASF 155 (456)
Q Consensus 81 ~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 155 (456)
+.. ..+....+..+.......+ ..+.+++++ .+||+||+|...+++..+|+++|||++.+++.....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~-------~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~ 138 (430)
T 2iyf_A 67 PDADPEAWGSTLLDNVEPFLNDAIQAL-PQLADAYAD-------DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAW 138 (430)
T ss_dssp TTSCGGGGCSSHHHHHHHHHHHHHHHH-HHHHHHHTT-------SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCC
T ss_pred ccccccccchhhHHHHHHHHHHHHHHH-HHHHHHhhc-------cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccc
Confidence 111 0122222222222222222 334445543 589999999987889999999999999987654310
Q ss_pred HHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHH-------HHhhcc
Q 039408 156 LGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRH-------AARYME 228 (456)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~ 228 (456)
... ...+ .....+ .....++. .. + ......+... ......
T Consensus 139 ~~~-~~~~---~~~~~~---------------~~~~~~~~---------~~-~----~~~~~~~~~~~g~~~~~~~~~~~ 185 (430)
T 2iyf_A 139 KGY-EEEV---AEPMWR---------------EPRQTERG---------RA-Y----YARFEAWLKENGITEHPDTFASH 185 (430)
T ss_dssp TTH-HHHT---HHHHHH---------------HHHHSHHH---------HH-H----HHHHHHHHHHTTCCSCHHHHHHC
T ss_pred ccc-cccc---ccchhh---------------hhccchHH---------HH-H----HHHHHHHHHHhCCCCCHHHHhcC
Confidence 000 0000 000000 00000000 00 0 0000000000 001124
Q ss_pred CCeEEecccccccHHHHHHHHcCCCCC-eEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHH
Q 039408 229 TEGIVVNTFQELEPYAIESISVNGMPP-VYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGP 307 (456)
Q Consensus 229 ~~~~l~~s~~~le~~~~~~~~~~~~~~-v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~ 307 (456)
++.+++++..+++... ..++++ +++|||.+.... +..+|++..+++++|||++||+.....+
T Consensus 186 ~~~~l~~~~~~~~~~~-----~~~~~~~v~~vG~~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~ 248 (430)
T 2iyf_A 186 PPRSLVLIPKALQPHA-----DRVDEDVYTFVGACQGDRA------------EEGGWQRPAGAEKVVLVSLGSAFTKQPA 248 (430)
T ss_dssp CSSEEECSCGGGSTTG-----GGSCTTTEEECCCCC-----------------CCCCCCCTTCSEEEEEECTTTCC-CHH
T ss_pred CCcEEEeCcHHhCCCc-----ccCCCccEEEeCCcCCCCC------------CCCCCccccCCCCeEEEEcCCCCCCcHH
Confidence 5778899888777531 124556 999998654221 0124666555678999999999855667
Q ss_pred HHHHHHHHHHhc-CCeEEEEEeCC-CCCccCCCCccccccccccCchh--------HHhhcCCcee--EEeeCcceeccc
Q 039408 308 QLREIAIGLQRV-GFRFLWSIREP-SKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL--SLWYGVPIATWP 375 (456)
Q Consensus 308 ~~~~l~~al~~~-~~~~vw~~~~~-~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~--al~~GVP~v~~P 375 (456)
.+.+++++++.. +.+++|.++.. ... .+...++|+.+.+|+|+. |+.|+|...+ |+++|+|+|++|
T Consensus 249 ~~~~~~~~l~~~~~~~~~~~~G~~~~~~--~l~~~~~~v~~~~~~~~~~~l~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p 326 (430)
T 2iyf_A 249 FYRECVRAFGNLPGWHLVLQIGRKVTPA--ELGELPDNVEVHDWVPQLAILRQADLFVTHAGAGGSQEGLATATPMIAVP 326 (430)
T ss_dssp HHHHHHHHHTTCTTEEEEEECC---CGG--GGCSCCTTEEEESSCCHHHHHTTCSEEEECCCHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCChH--HhccCCCCeEEEecCCHHHHhhccCEEEECCCccHHHHHHHhCCCEEECC
Confidence 788899999886 88898988764 211 122345788888999865 3444332223 999999999999
Q ss_pred cccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 376 LYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 376 ~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
..+||+.|++++++. |+|+.+.. +.++.++|+++|+++|+ |+++|++++++++.+++
T Consensus 327 ~~~~q~~~a~~~~~~-g~g~~~~~--------~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 327 QAVDQFGNADMLQGL-GVARKLAT--------EEATADLLRETALALVD-DPEVARRLRRIQAEMAQ 383 (430)
T ss_dssp CSHHHHHHHHHHHHT-TSEEECCC--------C-CCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHc-CCEEEcCC--------CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHh
Confidence 999999999999986 99998874 46899999999999998 89999999999888764
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.96 E-value=5.5e-29 Score=252.03 Aligned_cols=346 Identities=13% Similarity=0.100 Sum_probs=210.5
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPSPD 82 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~ 82 (456)
.+||++++.++.||++|+++||++|.++||+ |+|++++ .+.+.+. ..+++|++++......+.
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~Ghe--V~~~~~~--------~~~~~v~-------~~G~~~~~i~~~~~~~~~ 82 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHE--VRVVASP--------ALTEDIT-------AAGLTAVPVGTDVDLVDF 82 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCE--EEEEECG--------GGHHHHH-------TTTCCEEECSCCCCHHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCe--EEEEeCc--------hhHHHHH-------hCCCceeecCCccchHHH
Confidence 3579999999999999999999999999988 9999976 3344443 346899988754200000
Q ss_pred C------C------CC-----hH----HHHHH---HH-HHhc-----h-hHHHHHHHHHhhcCCCCCCCCeeEEEEcCCC
Q 039408 83 Q------Y------KS-----TL----GYLSL---FI-EKHK-----P-HVKNEITNLIETESDSEDSDRVAGLFIDMFC 131 (456)
Q Consensus 83 ~------~------~~-----~~----~~~~~---~~-~~~~-----~-~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~ 131 (456)
. . .+ .. ..+.. .+ .... . .+.+.++ ++++ .+||+||+|.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~-------~~pDlVv~d~~~ 154 (441)
T 2yjn_A 83 MTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVS-FCRK-------WRPDLVIWEPLT 154 (441)
T ss_dssp HHHTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHH-HHHH-------HCCSEEEECTTC
T ss_pred hhhhhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHH-HHHh-------cCCCEEEecCcc
Confidence 0 0 00 10 11111 11 1111 1 3333333 3332 489999999988
Q ss_pred ccHHHHHHHhCCCeEEEecccHHHHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhcc
Q 039408 132 TSMTDVANQLGIPCYLYFASPASFLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKR 211 (456)
Q Consensus 132 ~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~ 211 (456)
.++..+|+++|||++.+...+............. ... .|.. . ....+
T Consensus 155 ~~~~~aA~~lgiP~v~~~~~~~~~~~~~~~~~~~--~~~---------------------~~~~--~-----~~~~~--- 201 (441)
T 2yjn_A 155 FAAPIAAAVTGTPHARLLWGPDITTRARQNFLGL--LPD---------------------QPEE--H-----REDPL--- 201 (441)
T ss_dssp THHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHH--GGG---------------------SCTT--T-----CCCHH---
T ss_pred hhHHHHHHHcCCCEEEEecCCCcchhhhhhhhhh--ccc---------------------cccc--c-----ccchH---
Confidence 8899999999999999865443211110000000 000 0000 0 00000
Q ss_pred ccccHHHHHHHHHhhc---------cCCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHH
Q 039408 212 KRDGYVWYLRHAARYM---------ETEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIM 282 (456)
Q Consensus 212 ~~~~~~~~~~~~~~~~---------~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~ 282 (456)
.+.+.+....+. ..+..+..+...++.+ ..++ -..+++... ..+.++.
T Consensus 202 ----~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~--~~~~~~~~~-----------~~~~~~~ 258 (441)
T 2yjn_A 202 ----AEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLD------TGLK--TVGMRYVDY-----------NGPSVVP 258 (441)
T ss_dssp ----HHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGSCC------CCCC--EEECCCCCC-----------CSSCCCC
T ss_pred ----HHHHHHHHHHcCCCCCCccccCCCeEEEecCccccCC------CCCC--CCceeeeCC-----------CCCcccc
Confidence 011111111110 1222333333333210 0011 022222211 1123456
Q ss_pred hhhccCCCCeEEEEeccCCcCC---CHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh------
Q 039408 283 KWLDDQPPSSVVFLCFGSMGSF---VGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG------ 353 (456)
Q Consensus 283 ~wLd~~~~~~vVyvsfGS~~~~---~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~------ 353 (456)
+|++..+++++|||+|||+... ..+.+..++++|...+.++||+.+..... .+...++|+++.+|+|+.
T Consensus 259 ~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~--~l~~~~~~v~~~~~~~~~~ll~~a 336 (441)
T 2yjn_A 259 EWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE--GVANIPDNVRTVGFVPMHALLPTC 336 (441)
T ss_dssp GGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS--SCSSCCSSEEECCSCCHHHHGGGC
T ss_pred hHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh--hhccCCCCEEEecCCCHHHHHhhC
Confidence 8998766778999999998753 33557788999998899999998754211 122346789889999864
Q ss_pred --HHhhcCCcee---EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 354 --FLNRTAGVGL---SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 354 --f~~~~g~~G~---al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|++|+ |.|+ ++++|||+|++|++.||+.||+++++. |+|+.+.. +.++.++|+++|+++|+ |++
T Consensus 337 d~~V~~~-G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~--------~~~~~~~l~~~i~~ll~-~~~ 405 (441)
T 2yjn_A 337 AATVHHG-GPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPV--------PELTPDQLRESVKRVLD-DPA 405 (441)
T ss_dssp SEEEECC-CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT--------TTCCHHHHHHHHHHHHH-CHH
T ss_pred CEEEECC-CHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccc--------ccCCHHHHHHHHHHHhc-CHH
Confidence 44443 3444 999999999999999999999999997 99998874 46899999999999998 899
Q ss_pred HHHHHHHHHHHHHH
Q 039408 429 VRKKVKEMREKSRT 442 (456)
Q Consensus 429 ~r~~A~~l~~~~~~ 442 (456)
||++++++++.+++
T Consensus 406 ~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 406 HRAGAARMRDDMLA 419 (441)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999988864
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.96 E-value=3.4e-29 Score=248.78 Aligned_cols=331 Identities=13% Similarity=0.087 Sum_probs=212.4
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCC------
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVD------ 77 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~------ 77 (456)
+||++++.++.||++|+++||++|+++||+ |+|++++ .+.+.+. ..+++++.++...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~--V~~~~~~--------~~~~~~~-------~~g~~~~~~~~~~~~~~~~ 63 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQ--VVMAANQ--------DMGPVVT-------GVGLPAVATTDLPIRHFIT 63 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEECG--------GGHHHHH-------HTTCCEEESCSSCHHHHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCE--EEEEeCH--------HHHHHHH-------hCCCEEEEeCCcchHHHHh
Confidence 369999999999999999999999999988 9999875 2222222 2357888776431
Q ss_pred -----CCCCCCCC-ChHHHH-HH-HHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEEEe
Q 039408 78 -----PPSPDQYK-STLGYL-SL-FIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYLYF 149 (456)
Q Consensus 78 -----~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~~~ 149 (456)
.+...... .....+ .. +.......+.+.. +++++ .+||+||+|.+..++..+|+.+|||++.+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~-------~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~ 135 (384)
T 2p6p_A 64 TDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRML-DFSRA-------WRPDLIVGGTMSYVAPLLALHLGVPHARQT 135 (384)
T ss_dssp BCTTSCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-------HCCSEEEEETTCTHHHHHHHHHTCCEEEEC
T ss_pred hhcccCccccCcchHHHHHHHHHHHHhhHHHHHHHHH-HHHhc-------cCCcEEEECcchhhHHHHHHhcCCCEEEec
Confidence 00000000 001111 11 1111112233333 33332 489999999988888899999999999875
Q ss_pred cccHHHHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHh--hc
Q 039408 150 ASPASFLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAAR--YM 227 (456)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~ 227 (456)
..+.. . . . +...+. .....+...... ..
T Consensus 136 ~~~~~-----------------------------~--------~----~-----~~~~~~----~~~~~~~~~~g~~~~~ 165 (384)
T 2p6p_A 136 WDAVD-----------------------------A--------D----G-----IHPGAD----AELRPELSELGLERLP 165 (384)
T ss_dssp CSSCC-----------------------------C--------T----T-----THHHHH----HHTHHHHHHTTCSSCC
T ss_pred cCCcc-----------------------------c--------c----h-----hhHHHH----HHHHHHHHHcCCCCCC
Confidence 32210 0 0 0 000000 000001100000 01
Q ss_pred cCCeEEecccccccHHHHHHHHcCCC-CCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCC--
Q 039408 228 ETEGIVVNTFQELEPYAIESISVNGM-PPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSF-- 304 (456)
Q Consensus 228 ~~~~~l~~s~~~le~~~~~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~-- 304 (456)
.++.+++++...++... . .+ .++.+++ .. .+.++.+|++..+++++|||+|||+...
T Consensus 166 ~~~~~l~~~~~~~~~~~-----~-~~~~~~~~~~---~~-----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~ 225 (384)
T 2p6p_A 166 APDLFIDICPPSLRPAN-----A-APARMMRHVA---TS-----------RQCPLEPWMYTRDTRQRVLVTSGSRVAKES 225 (384)
T ss_dssp CCSEEEECSCGGGSCTT-----S-CCCEECCCCC---CC-----------CCCBCCHHHHCCCSSCEEEEECSSSSSCCS
T ss_pred CCCeEEEECCHHHCCCC-----C-CCCCceEecC---CC-----------CCCCCCchhhcCCCCCEEEEECCCCCcccc
Confidence 14567777776665321 1 11 1222221 10 0123557888755678999999998754
Q ss_pred ---CHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee--EEeeCcce
Q 039408 305 ---VGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL--SLWYGVPI 371 (456)
Q Consensus 305 ---~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~--al~~GVP~ 371 (456)
+.+.+.+++++|++.+.+++|+.+..... .+.+.++|+.+ +|+|+. |++|+|...+ |+++|||+
T Consensus 226 ~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~l~~~~~~v~~-~~~~~~~~l~~~d~~v~~~G~~t~~Ea~~~G~P~ 302 (384)
T 2p6p_A 226 YDRNFDFLRGLAKDLVRWDVELIVAAPDTVAE--ALRAEVPQARV-GWTPLDVVAPTCDLLVHHAGGVSTLTGLSAGVPQ 302 (384)
T ss_dssp SCCCCTTHHHHHHHHHTTTCEEEEECCHHHHH--HHHHHCTTSEE-ECCCHHHHGGGCSEEEECSCTTHHHHHHHTTCCE
T ss_pred ccccHHHHHHHHHHHhcCCcEEEEEeCCCCHH--hhCCCCCceEE-cCCCHHHHHhhCCEEEeCCcHHHHHHHHHhCCCE
Confidence 45778899999999999999987743100 01123578888 999864 4555444333 99999999
Q ss_pred eccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 372 ATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 372 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
|++|.+.||+.|++++++. |+|+.+.. +.++.++|+++|+++|+ |++||++++++++.+++
T Consensus 303 v~~p~~~dq~~~a~~~~~~-g~g~~~~~--------~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 303 LLIPKGSVLEAPARRVADY-GAAIALLP--------GEDSTEAIADSCQELQA-KDTYARRAQDLSREISG 363 (384)
T ss_dssp EECCCSHHHHHHHHHHHHH-TSEEECCT--------TCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHT
T ss_pred EEccCcccchHHHHHHHHC-CCeEecCc--------CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHh
Confidence 9999999999999999987 99998874 35899999999999998 89999999999999874
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.94 E-value=7.6e-27 Score=233.00 Aligned_cols=336 Identities=16% Similarity=0.137 Sum_probs=193.3
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCC-----
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVD----- 77 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----- 77 (456)
++||++++.++.||++|++.|+++|.++||+ |++++++ .+.+.+. ..+++++.++...
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~Ghe--V~v~~~~--------~~~~~~~-------~~G~~~~~~~~~~~~~~~ 77 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHE--VLVAASE--------NMGPTVT-------GAGLPFAPTCPSLDMPEV 77 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEEEG--------GGHHHHH-------HTTCCEEEEESSCCHHHH
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCE--EEEEcCH--------HHHHHHH-------hCCCeeEecCCccchHhh
Confidence 4689999999999999999999999999988 9999875 2333333 2357777665210
Q ss_pred -------CCCCCCCCChHHHHH---HHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeEE
Q 039408 78 -------PPSPDQYKSTLGYLS---LFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCYL 147 (456)
Q Consensus 78 -------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v~ 147 (456)
.+.... ......+. ..+......+...+.++++. .+||+||+|...+++..+|+.+|||++.
T Consensus 78 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pDlVv~d~~~~~~~~~a~~~giP~v~ 149 (398)
T 4fzr_A 78 LSWDREGNRTTMP-REEKPLLEHIGRGYGRLVLRMRDEALALAER-------WKPDLVLTETYSLTGPLVAATLGIPWIE 149 (398)
T ss_dssp HSBCTTSCBCCCC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCTHHHHHHHHHTCCEEE
T ss_pred hhhhccCcccccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCEEEECccccHHHHHHHhhCCCEEE
Confidence 000000 01111111 11111111222233344443 4899999999888899999999999998
Q ss_pred EecccHHHHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhc
Q 039408 148 YFASPASFLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYM 227 (456)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 227 (456)
+.................... . + . .. +++ .. .
T Consensus 150 ~~~~~~~~~~~~~~~~~~l~~-~---------~---~----~~---~~~-~~---------------------------~ 181 (398)
T 4fzr_A 150 QSIRLASPELIKSAGVGELAP-E---------L---A----EL---GLT-DF---------------------------P 181 (398)
T ss_dssp ECCSSCCCHHHHHHHHHHTHH-H---------H---H----TT---TCS-SC---------------------------C
T ss_pred eccCCCCchhhhHHHHHHHHH-H---------H---H----Hc---CCC-CC---------------------------C
Confidence 754432110000000000000 0 0 0 00 000 00 0
Q ss_pred cCCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCC---
Q 039408 228 ETEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSF--- 304 (456)
Q Consensus 228 ~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~--- 304 (456)
..+..+..+...+.... .....++...... ....++..|+...+++++|||++||+...
T Consensus 182 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~ 243 (398)
T 4fzr_A 182 DPLLSIDVCPPSMEAQP--------KPGTTKMRYVPYN----------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNT 243 (398)
T ss_dssp CCSEEEECSCGGGC------------CCCEECCCCCCC----------CSSCCCCHHHHSCCSSCEEECC----------
T ss_pred CCCeEEEeCChhhCCCC--------CCCCCCeeeeCCC----------CCCCCCchhhhcCCCCCEEEEEccCccccccc
Confidence 01112222222222110 0112222111100 01123446777655678999999998643
Q ss_pred -----CHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee---EEeeC
Q 039408 305 -----VGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL---SLWYG 368 (456)
Q Consensus 305 -----~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~---al~~G 368 (456)
..+.+..+++++.+.+.+++|+.+..... .+...++|+++.+|+|.. |++| +|.|+ |+++|
T Consensus 244 ~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~--~l~~~~~~v~~~~~~~~~~ll~~ad~~v~~-gG~~t~~Ea~~~G 320 (398)
T 4fzr_A 244 NTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQ--TLQPLPEGVLAAGQFPLSAIMPACDVVVHH-GGHGTTLTCLSEG 320 (398)
T ss_dssp ------CCSHHHHHHHGGGGTCEEEECCCC----------CCTTEEEESCCCHHHHGGGCSEEEEC-CCHHHHHHHHHTT
T ss_pred ccccchHHHHHHHHHHHHhCCCEEEEEeCCcchh--hhccCCCcEEEeCcCCHHHHHhhCCEEEec-CCHHHHHHHHHhC
Confidence 34558889999999999999988764211 123456889888898864 3333 33344 99999
Q ss_pred cceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 369 VPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 369 VP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
||+|++|...||+.|+.++++. |+|+.+.. +.++.+.|+++|+++|+ |+++|+++++.++.+++
T Consensus 321 ~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~--------~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 321 VPQVSVPVIAEVWDSARLLHAA-GAGVEVPW--------EQAGVESVLAACARIRD-DSSYVGNARRLAAEMAT 384 (398)
T ss_dssp CCEEECCCSGGGHHHHHHHHHT-TSEEECC---------------CHHHHHHHHHH-CTHHHHHHHHHHHHHTT
T ss_pred CCEEecCCchhHHHHHHHHHHc-CCEEecCc--------ccCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHc
Confidence 9999999999999999999998 99999885 46799999999999998 89999999999988763
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.93 E-value=2.1e-25 Score=222.59 Aligned_cols=326 Identities=16% Similarity=0.155 Sum_probs=201.3
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCC---
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPP--- 79 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~--- 79 (456)
.+||++++.++.||++|++.||++|.++||+ |+++++ . +.+.+. ..+++++.++.....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~Ghe--V~v~~~-~--------~~~~~~-------~~G~~~~~~~~~~~~~~~ 81 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHD--VLIAVA-E--------HADRAA-------AAGLEVVDVAPDYSAVKV 81 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEES-S--------CHHHHH-------TTTCEEEESSTTCCHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCE--EEEecc-c--------hHHHHH-------hCCCeeEecCCccCHHHH
Confidence 3589999999999999999999999999988 999986 2 122222 346889888743100
Q ss_pred -----------------CCCCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhC
Q 039408 80 -----------------SPDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLG 142 (456)
Q Consensus 80 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lg 142 (456)
.... ........+.......+.. +.++++. .+||+||+|...+++..+|+.+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-l~~~l~~-------~~pDlVv~d~~~~~~~~aA~~~g 151 (398)
T 3oti_A 82 FEQVAKDNPRFAETVATRPAI--DLEEWGVQIAAVNRPLVDG-TMALVDD-------YRPDLVVYEQGATVGLLAADRAG 151 (398)
T ss_dssp HHHHHHHCHHHHHTGGGSCCC--SGGGGHHHHHHHHGGGHHH-HHHHHHH-------HCCSEEEEETTCHHHHHHHHHHT
T ss_pred hhhcccCCccccccccCChhh--hHHHHHHHHHHHHHHHHHH-HHHHHHH-------cCCCEEEECchhhHHHHHHHHcC
Confidence 0000 0111111122222223333 3334443 48999999998888999999999
Q ss_pred CCeEEEecccHHHHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHH
Q 039408 143 IPCYLYFASPASFLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRH 222 (456)
Q Consensus 143 iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 222 (456)
||++.+....... .... .... .....+...
T Consensus 152 iP~v~~~~~~~~~-------~~~~---------------------------------------~~~~----~~l~~~~~~ 181 (398)
T 3oti_A 152 VPAVQRNQSAWRT-------RGMH---------------------------------------RSIA----SFLTDLMDK 181 (398)
T ss_dssp CCEEEECCTTCCC-------TTHH---------------------------------------HHHH----TTCHHHHHH
T ss_pred CCEEEEeccCCCc-------cchh---------------------------------------hHHH----HHHHHHHHH
Confidence 9998765332100 0000 0000 000000000
Q ss_pred HH-hhccCCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCC
Q 039408 223 AA-RYMETEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSM 301 (456)
Q Consensus 223 ~~-~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~ 301 (456)
+. ........+..+...+... . ......+..... .....+.+|+...+++++|||++||+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~v~v~~G~~ 242 (398)
T 3oti_A 182 HQVSLPEPVATIESFPPSLLLE-----A---EPEGWFMRWVPY-----------GGGAVLGDRLPPVPARPEVAITMGTI 242 (398)
T ss_dssp TTCCCCCCSEEECSSCGGGGTT-----S---CCCSBCCCCCCC-----------CCCEECCSSCCCCCSSCEEEECCTTT
T ss_pred cCCCCCCCCeEEEeCCHHHCCC-----C---CCCCCCccccCC-----------CCCcCCchhhhcCCCCCEEEEEcCCC
Confidence 00 0001111222221111110 0 001111110000 01123446777656778999999999
Q ss_pred cCC--CHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee---EEeeC
Q 039408 302 GSF--VGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL---SLWYG 368 (456)
Q Consensus 302 ~~~--~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~---al~~G 368 (456)
... ..+.+.+++++|++.+.+++|+.+..... .+...++|+++.+|+|.. |++| +|.|+ |+++|
T Consensus 243 ~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~--~l~~~~~~v~~~~~~~~~~ll~~ad~~v~~-~G~~t~~Eal~~G 319 (398)
T 3oti_A 243 ELQAFGIGAVEPIIAAAGEVDADFVLALGDLDIS--PLGTLPRNVRAVGWTPLHTLLRTCTAVVHH-GGGGTVMTAIDAG 319 (398)
T ss_dssp HHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCG--GGCSCCTTEEEESSCCHHHHHTTCSEEEEC-CCHHHHHHHHHHT
T ss_pred ccccCcHHHHHHHHHHHHcCCCEEEEEECCcChh--hhccCCCcEEEEccCCHHHHHhhCCEEEEC-CCHHHHHHHHHhC
Confidence 543 56678889999999999999998765321 133456789888988754 4434 33344 99999
Q ss_pred cceeccccccccchhH--HHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 369 VPIATWPLYAEQQMNA--FELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 369 VP~v~~P~~~DQ~~na--~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
+|+|++|+..||+.|+ .++++. |+|+.++. +..+.+.|+ ++|+ |++||++++++++.+++
T Consensus 320 ~P~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~--------~~~~~~~l~----~ll~-~~~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 320 IPQLLAPDPRDQFQHTAREAVSRR-GIGLVSTS--------DKVDADLLR----RLIG-DESLRTAAREVREEMVA 381 (398)
T ss_dssp CCEEECCCTTCCSSCTTHHHHHHH-TSEEECCG--------GGCCHHHHH----HHHH-CHHHHHHHHHHHHHHHT
T ss_pred CCEEEcCCCchhHHHHHHHHHHHC-CCEEeeCC--------CCCCHHHHH----HHHc-CHHHHHHHHHHHHHHHh
Confidence 9999999999999999 999997 99999885 357777777 7887 89999999999998874
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.92 E-value=1.4e-24 Score=215.94 Aligned_cols=330 Identities=15% Similarity=0.158 Sum_probs=201.2
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeC-CCCCC----
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYL-PSVDP---- 78 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l-~~~~~---- 78 (456)
+||++++.++.||++|++.|+++|.++||+ |++++++ .+.+.+. ..+++++.+ .....
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~Ghe--V~v~~~~--------~~~~~~~-------~~g~~~~~~~~~~~~~~~~ 64 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHE--VLIAAPP--------ELQATAH-------GAGLTTAGIRGNDRTGDTG 64 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCE--EEEEECH--------HHHHHHH-------HBTCEEEEC----------
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCE--EEEecCh--------hhHHHHH-------hCCCceeeecCCccchhhh
Confidence 579999999999999999999999999998 9999865 3333333 245777777 32110
Q ss_pred -----CCCC--CC-CChHHHHHHHHHHhchh---H---HHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCC
Q 039408 79 -----PSPD--QY-KSTLGYLSLFIEKHKPH---V---KNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIP 144 (456)
Q Consensus 79 -----~~~~--~~-~~~~~~~~~~~~~~~~~---~---~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP 144 (456)
+... .. .........+....... + ...+.++++. .+||+||+|...+++..+|+.+|||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~PD~Vv~~~~~~~~~~aa~~~giP 137 (391)
T 3tsa_A 65 GTTQLRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-------WRPSVLLVDVCALIGRVLGGLLDLP 137 (391)
T ss_dssp ----CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHTTCC
T ss_pred hhhcccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-------cCCCEEEeCcchhHHHHHHHHhCCC
Confidence 0000 00 00011111111111111 0 2233444443 4899999998888888899999999
Q ss_pred eEEEecccHHHHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHH
Q 039408 145 CYLYFASPASFLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAA 224 (456)
Q Consensus 145 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 224 (456)
++.+......... .+. .....++.+...
T Consensus 138 ~v~~~~~~~~~~~-------------------------------------------------~~~---~~~~~~~~~~~~ 165 (391)
T 3tsa_A 138 VVLHRWGVDPTAG-------------------------------------------------PFS---DRAHELLDPVCR 165 (391)
T ss_dssp EEEECCSCCCTTT-------------------------------------------------HHH---HHHHHHHHHHHH
T ss_pred EEEEecCCccccc-------------------------------------------------ccc---chHHHHHHHHHH
Confidence 9887433210000 000 000000111111
Q ss_pred hh-----ccCCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEecc
Q 039408 225 RY-----METEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFG 299 (456)
Q Consensus 225 ~~-----~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfG 299 (456)
.+ ...+..+..+..+++.. .+.....+.++ |. .....+..|+...+++++||+++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-p~-------------~~~~~~~~~~~~~~~~~~vlv~~G 226 (391)
T 3tsa_A 166 HHGLTGLPTPELILDPCPPSLQAS-----DAPQGAPVQYV-PY-------------NGSGAFPAWGAARTSARRVCICMG 226 (391)
T ss_dssp HTTSSSSCCCSEEEECSCGGGSCT-----TSCCCEECCCC-CC-------------CCCEECCGGGSSCCSSEEEEEECC
T ss_pred HcCCCCCCCCceEEEecChhhcCC-----CCCccCCeeee-cC-------------CCCcCCCchhhcCCCCCEEEEEcC
Confidence 10 01122333222222210 00000011111 11 111233468776567789999999
Q ss_pred CCcC--CC-HHHHHHHHHHHHhc-CCeEEEEEeCCCCCccCCCCccccccccccCchh--------HHhhcCCcee---E
Q 039408 300 SMGS--FV-GPQLREIAIGLQRV-GFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL---S 364 (456)
Q Consensus 300 S~~~--~~-~~~~~~l~~al~~~-~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~---a 364 (456)
|... .. .+.+..++++ ++. +.+++|+.++.... .+...++|+++.+|+|+. |++| +|.++ |
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~--~l~~~~~~v~~~~~~~~~~ll~~ad~~v~~-~G~~t~~Ea 302 (391)
T 3tsa_A 227 RMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRA--LLTDLPDNARIAESVPLNLFLRTCELVICA-GGSGTAFTA 302 (391)
T ss_dssp HHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGG--GCTTCCTTEEECCSCCGGGTGGGCSEEEEC-CCHHHHHHH
T ss_pred CCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchh--hcccCCCCEEEeccCCHHHHHhhCCEEEeC-CCHHHHHHH
Confidence 9843 23 6667888888 877 78899987754211 133456788888888764 3333 33334 9
Q ss_pred EeeCcceeccccccccchhHHHHHHhhcceEEecc--cccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 365 LWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRL--DYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 365 l~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~--~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
+++|+|+|++|...||+.|+.++++. |+|+.+.. + ..+.+.|+++|+++|+ |+++|++++++++.+.+
T Consensus 303 ~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~--------~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 303 TRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQA--------QSDHEQFTDSIATVLG-DTGFAAAAIKLSDEITA 372 (391)
T ss_dssp HHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHH--------HTCHHHHHHHHHHHHT-CTHHHHHHHHHHHHHHT
T ss_pred HHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCcccc--------cCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999998 99999884 2 4789999999999998 99999999998888763
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.90 E-value=4e-22 Score=199.43 Aligned_cols=345 Identities=14% Similarity=0.099 Sum_probs=206.6
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCC------
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSV------ 76 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~------ 76 (456)
++||++++.++.||++|++.||++|.++||+ |++++++ .+.+.+. ..+++++.++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~Ghe--V~v~~~~--------~~~~~~~-------~~g~~~~~~~~~~~~~~~ 82 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHE--VTFATGE--------GFAGTLR-------KLGFEPVATGMPVFDGFL 82 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCE--EEEEECG--------GGHHHHH-------HTTCEEEECCCCHHHHHH
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCE--EEEEccH--------HHHHHHH-------hcCCceeecCcccccchh
Confidence 4689999999999999999999999999988 9999975 2222222 236888887641
Q ss_pred ------CCCCCCCCCChHHH----HHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCccHHHHHHHhCCCeE
Q 039408 77 ------DPPSPDQYKSTLGY----LSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTSMTDVANQLGIPCY 146 (456)
Q Consensus 77 ------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~v 146 (456)
.............. ...+.......+...+.++++. .+||+||+|...+++..+|+.+|||++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDvVv~~~~~~~~~~aa~~~giP~v 155 (412)
T 3otg_A 83 AALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-------LRPDLVVQEISNYGAGLAALKAGIPTI 155 (412)
T ss_dssp HHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEE
T ss_pred hhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-------cCCCEEEECchhhHHHHHHHHcCCCEE
Confidence 00000000001110 1111111011111223334433 489999999877778889999999998
Q ss_pred EEecccHHHHHHHhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhh
Q 039408 147 LYFASPASFLGFMLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARY 226 (456)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 226 (456)
.+..................... ..--+++. .. .. . .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~-~~--~~---~-----------------~ 192 (412)
T 3otg_A 156 CHGVGRDTPDDLTRSIEEEVRGL--------------------AQRLGLDL-PP--GR---I-----------------D 192 (412)
T ss_dssp EECCSCCCCSHHHHHHHHHHHHH--------------------HHHTTCCC-CS--SC---C-----------------G
T ss_pred EecccccCchhhhHHHHHHHHHH--------------------HHHcCCCC-Cc--cc---c-----------------c
Confidence 86543221000000000000000 00001100 00 00 0 0
Q ss_pred ccCCeEEecccccccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhh-hccCCCCeEEEEeccCCcCCC
Q 039408 227 METEGIVVNTFQELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKW-LDDQPPSSVVFLCFGSMGSFV 305 (456)
Q Consensus 227 ~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~w-Ld~~~~~~vVyvsfGS~~~~~ 305 (456)
..++.++..+..+++.... . ......++-+..... .....+| ....+++++||+++||.....
T Consensus 193 ~~~d~~i~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~ 256 (412)
T 3otg_A 193 GFGNPFIDIFPPSLQEPEF----R-ARPRRHELRPVPFAE-----------QGDLPAWLSSRDTARPLVYLTLGTSSGGT 256 (412)
T ss_dssp GGGCCEEECSCGGGSCHHH----H-TCTTEEECCCCCCCC-----------CCCCCGGGGGSCTTSCEEEEECTTTTCSC
T ss_pred CCCCeEEeeCCHHhcCCcc----c-CCCCcceeeccCCCC-----------CCCCCCccccccCCCCEEEEEcCCCCcCc
Confidence 1223344444333332110 0 111222222111110 1123356 332346789999999997566
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEeCCC-CCccCCCCccccccccccCchh--------HHhhcCCcee--EEeeCcceecc
Q 039408 306 GPQLREIAIGLQRVGFRFLWSIREPS-KSKIYLPGEYTNLKVKEMLPEG--------FLNRTAGVGL--SLWYGVPIATW 374 (456)
Q Consensus 306 ~~~~~~l~~al~~~~~~~vw~~~~~~-~~~~~~~~~~~n~~~~~~lP~~--------f~~~~g~~G~--al~~GVP~v~~ 374 (456)
.+.+.++++++++.+.+++|+.+... .. .+...++|+.+.+|+|.. |+.+.|...+ |+++|+|+|++
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~--~l~~~~~~v~~~~~~~~~~~l~~ad~~v~~~g~~t~~Ea~a~G~P~v~~ 334 (412)
T 3otg_A 257 VEVLRAAIDGLAGLDADVLVASGPSLDVS--GLGEVPANVRLESWVPQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSF 334 (412)
T ss_dssp HHHHHHHHHHHHTSSSEEEEECCSSCCCT--TCCCCCTTEEEESCCCHHHHGGGCSEEEESCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCCCChh--hhccCCCcEEEeCCCCHHHHHhcCcEEEECCchHHHHHHHHhCCCEEec
Confidence 77788999999988999999987652 21 123446788888887632 3333222222 99999999999
Q ss_pred ccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 375 PLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 375 P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
|...||..|+.++++. |+|+.+.. +.++.++|+++|+++|+ |+++|+++.+.++.+.+
T Consensus 335 p~~~~q~~~~~~v~~~-g~g~~~~~--------~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 335 PWAGDSFANAQAVAQA-GAGDHLLP--------DNISPDSVSGAAKRLLA-EESYRAGARAVAAEIAA 392 (412)
T ss_dssp CCSTTHHHHHHHHHHH-TSEEECCG--------GGCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHc-CCEEecCc--------ccCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhc
Confidence 9999999999999998 99999985 36899999999999998 89999999888888764
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.81 E-value=3.3e-20 Score=162.38 Aligned_cols=151 Identities=19% Similarity=0.368 Sum_probs=121.6
Q ss_pred CChhhHHhhhccCCCCeEEEEeccCCc-CCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCCCCccccccccccCchh-
Q 039408 276 VHHESIMKWLDDQPPSSVVFLCFGSMG-SFVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYLPGEYTNLKVKEMLPEG- 353 (456)
Q Consensus 276 ~~~~~~~~wLd~~~~~~vVyvsfGS~~-~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~~~~~~n~~~~~~lP~~- 353 (456)
..+.++.+|++..+++++|||+|||+. ....+.+..++++|++.+.+++|+.+.... ...++|+++..|+|+.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-----~~~~~~v~~~~~~~~~~ 80 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP-----DTLGLNTRLYKWIPQND 80 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC-----TTCCTTEEEESSCCHHH
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc-----ccCCCcEEEecCCCHHH
Confidence 467889999997767789999999986 456677889999999889999999875421 1235788888999864
Q ss_pred ---------HHhhcCCcee---EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHH
Q 039408 354 ---------FLNRTAGVGL---SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRR 421 (456)
Q Consensus 354 ---------f~~~~g~~G~---al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~ 421 (456)
|++| +|.++ |+++|+|+|++|...||+.||+++++. |+|+.++. +.++.++|+++|++
T Consensus 81 ~l~~~~ad~~I~~-~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~--------~~~~~~~l~~~i~~ 150 (170)
T 2o6l_A 81 LLGHPKTRAFITH-GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF--------NTMSSTDLLNALKR 150 (170)
T ss_dssp HHTSTTEEEEEEC-CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT--------TTCCHHHHHHHHHH
T ss_pred HhcCCCcCEEEEc-CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc--------ccCCHHHHHHHHHH
Confidence 2333 33344 999999999999999999999999997 99999874 46899999999999
Q ss_pred hcCCChHHHHHHHHHHHHHHH
Q 039408 422 LMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 422 vl~~~~~~r~~A~~l~~~~~~ 442 (456)
+|. |++||++|+++++.+++
T Consensus 151 ll~-~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 151 VIN-DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHH-CHHHHHHHHHHC-----
T ss_pred HHc-CHHHHHHHHHHHHHhhC
Confidence 998 89999999999998874
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.74 E-value=6.7e-18 Score=166.13 Aligned_cols=305 Identities=14% Similarity=0.062 Sum_probs=159.3
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCCCCCC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSVDPPS 80 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~ 80 (456)
|++ +|++..-++-||++|.++||++|.++||+ |+|+++....+ ...+. ..++++..++....+.
T Consensus 1 M~~-~i~i~~GGTgGHi~palala~~L~~~g~~--V~~vg~~~g~e---~~~v~----------~~g~~~~~i~~~~~~~ 64 (365)
T 3s2u_A 1 MKG-NVLIMAGGTGGHVFPALACAREFQARGYA--VHWLGTPRGIE---NDLVP----------KAGLPLHLIQVSGLRG 64 (365)
T ss_dssp --C-EEEEECCSSHHHHHHHHHHHHHHHHTTCE--EEEEECSSSTH---HHHTG----------GGTCCEEECC------
T ss_pred CCC-cEEEEcCCCHHHHHHHHHHHHHHHhCCCE--EEEEECCchHh---hchhh----------hcCCcEEEEECCCcCC
Confidence 766 69888887789999999999999999988 99998652111 01122 2357777776432111
Q ss_pred CCCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCcc--HHHHHHHhCCCeEEEecccHHHHHH
Q 039408 81 PDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCTS--MTDVANQLGIPCYLYFASPASFLGF 158 (456)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~ 158 (456)
. .....+...+... ..+.+... +++. .+||+||.+..... +..+|..+|||++.+-...
T Consensus 65 -~---~~~~~~~~~~~~~-~~~~~~~~-~l~~-------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~------ 125 (365)
T 3s2u_A 65 -K---GLKSLVKAPLELL-KSLFQALR-VIRQ-------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA------ 125 (365)
T ss_dssp ------------CHHHHH-HHHHHHHH-HHHH-------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS------
T ss_pred -C---CHHHHHHHHHHHH-HHHHHHHH-HHHh-------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch------
Confidence 0 0111111111111 11222222 3332 48999999975544 3567899999998652110
Q ss_pred HhhcccccccccccccccCCccccCCCCCCceecCCCCCCCCCCCCChhhhccccccHHHHHHHHHhhccCCeEEecccc
Q 039408 159 MLHFPNIDAQIANEFVESNTDFFVPKDSTTELVIPSFANPLPPSVLPSTVLKRKRDGYVWYLRHAARYMETEGIVVNTFQ 238 (456)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 238 (456)
.||+. ..+. .+.++.+. .++.
T Consensus 126 ---------------------------------~~G~~---------nr~l----------------~~~a~~v~-~~~~ 146 (365)
T 3s2u_A 126 ---------------------------------VAGTA---------NRSL----------------APIARRVC-EAFP 146 (365)
T ss_dssp ---------------------------------SCCHH---------HHHH----------------GGGCSEEE-ESST
T ss_pred ---------------------------------hhhhH---------HHhh----------------ccccceee-eccc
Confidence 01110 0000 01111111 1111
Q ss_pred cccHHHHHHHHcCCCCCeEEecccccCCCCCCCCCCCCChhhHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHHHHh
Q 039408 239 ELEPYAIESISVNGMPPVYPIGPVLDLNGPAQWHPDRVHHESIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGLQR 318 (456)
Q Consensus 239 ~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~ 318 (456)
+..+ .....+.+|......... ...-...++ +++++|+|..||..... ..+.+.++++.
T Consensus 147 ~~~~---------~~~k~~~~g~pvr~~~~~--------~~~~~~~~~--~~~~~ilv~gGs~g~~~--~~~~~~~al~~ 205 (365)
T 3s2u_A 147 DTFP---------ASDKRLTTGNPVRGELFL--------DAHARAPLT--GRRVNLLVLGGSLGAEP--LNKLLPEALAQ 205 (365)
T ss_dssp TSSC---------C---CEECCCCCCGGGCC--------CTTSSCCCT--TSCCEEEECCTTTTCSH--HHHHHHHHHHT
T ss_pred cccc---------CcCcEEEECCCCchhhcc--------chhhhcccC--CCCcEEEEECCcCCccc--cchhhHHHHHh
Confidence 1000 112345555433221110 000011122 24578899889875322 22335556654
Q ss_pred c----CCeEEEEEeCCCCCcc--CCCCccccccccccCch--h-------HHhhcCCcee--EEeeCcceeccccc----
Q 039408 319 V----GFRFLWSIREPSKSKI--YLPGEYTNLKVKEMLPE--G-------FLNRTAGVGL--SLWYGVPIATWPLY---- 377 (456)
Q Consensus 319 ~----~~~~vw~~~~~~~~~~--~~~~~~~n~~~~~~lP~--~-------f~~~~g~~G~--al~~GVP~v~~P~~---- 377 (456)
. +..++|..+....... .....+.|+.+..++++ . +++|.|+..+ ++++|+|+|.+|+-
T Consensus 206 l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~ 285 (365)
T 3s2u_A 206 VPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAID 285 (365)
T ss_dssp SCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECC-----C
T ss_pred cccccceEEEEecCccccccccceecccccccccccchhhhhhhhccceEEEecCCcchHHHHHHhCCCeEEeccCCCCC
Confidence 3 3456666554311000 00111234444555543 1 3444433222 99999999999863
Q ss_pred cccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 378 AEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 378 ~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
.+|..||+.+++. |+|+.+.. ..++.+.|.++|.++|. |++.+
T Consensus 286 ~~Q~~NA~~l~~~-G~a~~l~~--------~~~~~~~L~~~i~~ll~-d~~~~ 328 (365)
T 3s2u_A 286 DHQTRNAEFLVRS-GAGRLLPQ--------KSTGAAELAAQLSEVLM-HPETL 328 (365)
T ss_dssp CHHHHHHHHHHTT-TSEEECCT--------TTCCHHHHHHHHHHHHH-CTHHH
T ss_pred cHHHHHHHHHHHC-CCEEEeec--------CCCCHHHHHHHHHHHHC-CHHHH
Confidence 5899999999998 99999984 46899999999999998 76443
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.31 E-value=1.5e-10 Score=113.04 Aligned_cols=128 Identities=19% Similarity=0.172 Sum_probs=80.5
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHHHhc--CCeEEEEEeCCCCCcc-CC-CC-ccccccccccCch--h-------HH
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGLQRV--GFRFLWSIREPSKSKI-YL-PG-EYTNLKVKEMLPE--G-------FL 355 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~--~~~~vw~~~~~~~~~~-~~-~~-~~~n~~~~~~lP~--~-------f~ 355 (456)
++++|++..|+... ......++++++.. +.++++.++.+..... .+ .. ..+|+.+.+++.+ . |+
T Consensus 182 ~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v 259 (364)
T 1f0k_A 182 GPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVV 259 (364)
T ss_dssp SSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEE
T ss_pred CCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEE
Confidence 45677777788642 23334455666554 4566676665421000 00 00 0135666666532 1 22
Q ss_pred hhcCCcee----EEeeCcceeccccc---cccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 356 NRTAGVGL----SLWYGVPIATWPLY---AEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 356 ~~~g~~G~----al~~GVP~v~~P~~---~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
.. ++ |. |+++|+|+|+.|.. .||..|++.+.+. |.|+.++. +..+.++++++|.++ |++
T Consensus 260 ~~-sg-~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~--------~d~~~~~la~~i~~l---~~~ 325 (364)
T 1f0k_A 260 CR-SG-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQ--------PQLSVDAVANTLAGW---SRE 325 (364)
T ss_dssp EC-CC-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCG--------GGCCHHHHHHHHHTC---CHH
T ss_pred EC-Cc-hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecc--------ccCCHHHHHHHHHhc---CHH
Confidence 22 22 33 99999999999988 7999999999998 99998874 346799999999988 455
Q ss_pred HHHHH
Q 039408 429 VRKKV 433 (456)
Q Consensus 429 ~r~~A 433 (456)
.+++.
T Consensus 326 ~~~~~ 330 (364)
T 1f0k_A 326 TLLTM 330 (364)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 23
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.05 E-value=0.00071 Score=65.75 Aligned_cols=123 Identities=15% Similarity=0.196 Sum_probs=68.8
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHHHhc-----CCeEEEEEeCCC--CCcc-CCCCccccccccccCchh--------
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGLQRV-----GFRFLWSIREPS--KSKI-YLPGEYTNLKVKEMLPEG-------- 353 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~-----~~~~vw~~~~~~--~~~~-~~~~~~~n~~~~~~lP~~-------- 353 (456)
++++++++.|...... ..+..+++++... +.++++..+... .... .+....+++.+.++++..
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ 282 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNH 282 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHh
Confidence 4567888888765332 2344455554432 345555433220 0000 000112466554445421
Q ss_pred ---HHhhcCCcee--EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 354 ---FLNRTAGVGL--SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 354 ---f~~~~g~~G~--al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+...|+. + |+++|+|+|+.+..++. ..+.+. |.|+.++ . +.++++++|.++++ |++
T Consensus 283 ad~~v~~Sg~~-~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~---------~--d~~~la~~i~~ll~-d~~ 344 (384)
T 1vgv_A 283 AWLILTDSGGI-QEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVG---------T--DKQRIVEEVTRLLK-DEN 344 (384)
T ss_dssp CSEEEESSSTG-GGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEEC---------S--SHHHHHHHHHHHHH-CHH
T ss_pred CcEEEECCcch-HHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeC---------C--CHHHHHHHHHHHHh-ChH
Confidence 22222222 2 99999999999875443 334566 8888776 2 78999999999998 765
Q ss_pred HHH
Q 039408 429 VRK 431 (456)
Q Consensus 429 ~r~ 431 (456)
.++
T Consensus 345 ~~~ 347 (384)
T 1vgv_A 345 EYQ 347 (384)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=98.04 E-value=1.3e-06 Score=78.45 Aligned_cols=119 Identities=14% Similarity=0.095 Sum_probs=73.1
Q ss_pred CCCeEEEEeccCCcCCCHHHHHHH-----HHHHHhcC-CeEEEEEeCCCC---Ccc--C---------CCC---------
Q 039408 289 PPSSVVFLCFGSMGSFVGPQLREI-----AIGLQRVG-FRFLWSIREPSK---SKI--Y---------LPG--------- 339 (456)
Q Consensus 289 ~~~~vVyvsfGS~~~~~~~~~~~l-----~~al~~~~-~~~vw~~~~~~~---~~~--~---------~~~--------- 339 (456)
+++++|||+.||... -.+.+..+ +.+|...+ .++++.++.... ... . +|.
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 456789999999732 23333333 48887777 788888886521 000 0 010
Q ss_pred -----ccc--cccccccCch--hHHh-h------cCCcee---EEeeCcceeccccc----cccchhHHHHHHhhcceEE
Q 039408 340 -----EYT--NLKVKEMLPE--GFLN-R------TAGVGL---SLWYGVPIATWPLY----AEQQMNAFELVKELRLAVE 396 (456)
Q Consensus 340 -----~~~--n~~~~~~lP~--~f~~-~------~g~~G~---al~~GVP~v~~P~~----~DQ~~na~~v~~~~G~G~~ 396 (456)
... ++.+..++++ .++. + ++|.|+ ++++|+|+|++|.- .||..||+++++. |+++.
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~~~~ 183 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GYVWS 183 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SCCCE
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CCEEE
Confidence 001 2222333332 2233 2 345555 99999999999974 3699999999998 99864
Q ss_pred ecccccCCCCCcccchHHHHHHHHHh
Q 039408 397 IRLDYRDGRGSDLVSAEEIEWGLRRL 422 (456)
Q Consensus 397 l~~~~~~~~~~~~~~~~~l~~ai~~v 422 (456)
+ +.++|+++|+++
T Consensus 184 ~-------------~~~~L~~~i~~l 196 (224)
T 2jzc_A 184 C-------------APTETGLIAGLR 196 (224)
T ss_dssp E-------------CSCTTTHHHHHH
T ss_pred c-------------CHHHHHHHHHHH
Confidence 4 335566667666
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.83 E-value=0.004 Score=61.52 Aligned_cols=49 Identities=18% Similarity=0.163 Sum_probs=37.0
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+.+. ......+.+. +.|+.++. -+.++++++|.+++. +++
T Consensus 345 ama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~----------~d~~~la~~i~~l~~-~~~ 393 (438)
T 3c48_A 345 AQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG----------HSPHAWADALATLLD-DDE 393 (438)
T ss_dssp HHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS----------CCHHHHHHHHHHHHH-CHH
T ss_pred HHHcCCCEEecCC----CChhHHhhCC-CcEEECCC----------CCHHHHHHHHHHHHc-CHH
Confidence 9999999998653 4455555554 67877763 478999999999998 653
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.79 E-value=0.0059 Score=59.16 Aligned_cols=108 Identities=12% Similarity=0.140 Sum_probs=61.8
Q ss_pred CCCcEEEEEcC--C--CCcCHHHHHHHHHHHHcCCCceEEEEEEcCCCCChhhHHhhhhhhccccCCCCCceEEEeCCCC
Q 039408 1 MKKFRVVLICT--P--EMGNLVPLVEFAHLLTNRDRRFCATVLIMTVPERPIVNAYVKSRDALATTTDAHNINFVYLPSV 76 (456)
Q Consensus 1 m~~~~il~~~~--~--~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~ 76 (456)
|+++||++++. + .-|.-.-+..|++.| +||+ |++++..... ....... ...++.+..++..
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~--v~v~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~ 66 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPES--IVVFASTQNA-----EEAHAYD------KTLDYEVIRWPRS 66 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGG--EEEEEECSSH-----HHHHHHH------TTCSSEEEEESSS
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCe--EEEEECCCCc-----cchhhhc------cccceEEEEcccc
Confidence 45678999875 3 467788899999999 7998 8888875221 0001111 1335677666532
Q ss_pred CCCCCCCCCChHHHHHHHHHHhchhHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCc--cHHHHHHHhCCCeEEE
Q 039408 77 DPPSPDQYKSTLGYLSLFIEKHKPHVKNEITNLIETESDSEDSDRVAGLFIDMFCT--SMTDVANQLGIPCYLY 148 (456)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~v~~ 148 (456)
.. . ... .....+..+++. .++|+|++..... ....++..+|+|.+++
T Consensus 67 ~~---~--~~~-------------~~~~~l~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 67 VM---L--PTP-------------TTAHAMAEIIRE-------REIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp SC---C--SCH-------------HHHHHHHHHHHH-------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred cc---c--cch-------------hhHHHHHHHHHh-------cCCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 20 0 011 111122333333 4899999765433 3456688899996554
No 27
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.79 E-value=0.00031 Score=69.31 Aligned_cols=53 Identities=19% Similarity=0.158 Sum_probs=40.9
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKV 433 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A 433 (456)
|.++|+|+|+.|-.++++. +++. |.|+.+. .+.++|.++|.+++. +++.+++.
T Consensus 316 A~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~-----------~d~~~l~~ai~~ll~-~~~~~~~m 368 (403)
T 3ot5_A 316 APGMGVPVLVLRDTTERPE----GIEA-GTLKLIG-----------TNKENLIKEALDLLD-NKESHDKM 368 (403)
T ss_dssp GGGTTCCEEECCSSCSCHH----HHHH-TSEEECC-----------SCHHHHHHHHHHHHH-CHHHHHHH
T ss_pred HHHhCCCEEEecCCCcchh----heeC-CcEEEcC-----------CCHHHHHHHHHHHHc-CHHHHHHH
Confidence 9999999999976677664 3455 8877655 378999999999998 77655443
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=97.72 E-value=0.0011 Score=64.19 Aligned_cols=52 Identities=15% Similarity=0.162 Sum_probs=40.6
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKK 432 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~ 432 (456)
|+++|+|+|+.+..+++.. +.+. |.|+.++ .+.++|+++|.++++ |++.+++
T Consensus 289 A~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~-----------~d~~~la~~i~~ll~-d~~~~~~ 340 (376)
T 1v4v_A 289 GAALGVPVVVLRNVTERPE----GLKA-GILKLAG-----------TDPEGVYRVVKGLLE-NPEELSR 340 (376)
T ss_dssp HHHTTCCEEECSSSCSCHH----HHHH-TSEEECC-----------SCHHHHHHHHHHHHT-CHHHHHH
T ss_pred HHHcCCCEEeccCCCcchh----hhcC-CceEECC-----------CCHHHHHHHHHHHHh-ChHhhhh
Confidence 9999999999887777665 3455 8887664 278999999999998 7754443
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.68 E-value=0.0045 Score=60.94 Aligned_cols=56 Identities=7% Similarity=0.101 Sum_probs=39.0
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC-CC---hHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD-GD---DEVRKKVKE 435 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~-~~---~~~r~~A~~ 435 (456)
|+++|+|+|+... ......+ +. |.|+.++. -+.++++++|.+++. +. ..+++++++
T Consensus 350 Ama~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~~----------~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 409 (439)
T 3fro_A 350 AMCLGAIPIASAV----GGLRDII-TN-ETGILVKA----------GDPGELANAILKALELSRSDLSKFRENCKK 409 (439)
T ss_dssp HHHTTCEEEEESS----THHHHHC-CT-TTCEEECT----------TCHHHHHHHHHHHHHHTTTTTHHHHHHHHH
T ss_pred HHHCCCCeEEcCC----CCcceeE-Ec-CceEEeCC----------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9999999998643 3444433 34 78887773 478999999999986 22 255555554
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.54 E-value=0.027 Score=56.70 Aligned_cols=49 Identities=20% Similarity=0.198 Sum_probs=37.1
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDE 428 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~ 428 (456)
|+++|+|+|+... ......+.+. +.|+.++. -+.++++++|.+++. +++
T Consensus 378 Ama~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~----------~d~~~la~~i~~ll~-~~~ 426 (499)
T 2r60_A 378 AMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP----------EDPEDIARGLLKAFE-SEE 426 (499)
T ss_dssp HHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT----------TCHHHHHHHHHHHHS-CHH
T ss_pred HHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC----------CCHHHHHHHHHHHHh-CHH
Confidence 9999999998753 4455555543 57887773 478999999999998 753
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=97.43 E-value=0.009 Score=58.55 Aligned_cols=68 Identities=13% Similarity=0.141 Sum_probs=45.5
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHHh
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRTA 443 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a 443 (456)
|.++|+|+|+..-..+++ .+++. |.++.+. .+.++|.++|+++++ |++.+++..+-. ..
T Consensus 322 A~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~-----------~d~~~l~~ai~~ll~-d~~~~~~m~~~~----~~ 380 (396)
T 3dzc_A 322 APSLGKPVLVMRETTERP----EAVAA-GTVKLVG-----------TNQQQICDALSLLLT-DPQAYQAMSQAH----NP 380 (396)
T ss_dssp GGGGTCCEEECCSSCSCH----HHHHH-TSEEECT-----------TCHHHHHHHHHHHHH-CHHHHHHHHTSC----CT
T ss_pred HHHcCCCEEEccCCCcch----HHHHc-CceEEcC-----------CCHHHHHHHHHHHHc-CHHHHHHHhhcc----CC
Confidence 999999999975445543 24555 8775444 268999999999998 776655443321 12
Q ss_pred hccCCCchh
Q 039408 444 VMEEGSSNK 452 (456)
Q Consensus 444 ~~~gGss~~ 452 (456)
.+.|+++.+
T Consensus 381 ~~~~~aa~r 389 (396)
T 3dzc_A 381 YGDGKACQR 389 (396)
T ss_dssp TCCSCHHHH
T ss_pred CcCChHHHH
Confidence 356666654
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.20 E-value=0.039 Score=53.54 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=38.1
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEV 429 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 429 (456)
|+++|+|+|+.+. ......+.+. +.|+.++. -+.++++++|.+++. +++.
T Consensus 303 a~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~----------~d~~~l~~~i~~l~~-~~~~ 352 (406)
T 2gek_A 303 AMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV----------DDADGMAAALIGILE-DDQL 352 (406)
T ss_dssp HHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT----------TCHHHHHHHHHHHHH-CHHH
T ss_pred HHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC----------CCHHHHHHHHHHHHc-CHHH
Confidence 9999999999765 4556666654 67877663 478999999999998 6543
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=96.56 E-value=0.52 Score=45.34 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=28.4
Q ss_pred cEEEEEcCCCC-cCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 4 FRVVLICTPEM-GNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 4 ~~il~~~~~~~-GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+.+....+|.. |.-.-...|++.|+++||+ |++++..
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~--V~v~~~~ 53 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHE--IHFITSG 53 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCE--EEEECSS
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCE--EEEEeCC
Confidence 45777777754 4557778999999999988 9999864
No 34
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=96.34 E-value=0.092 Score=51.07 Aligned_cols=118 Identities=10% Similarity=0.078 Sum_probs=65.9
Q ss_pred CeEEEEeccCCcCCC-HHHHHHHHHHHHhc----CCeEEEEEeCCCCCc-cCC---CCccccccccccCch-h---HHhh
Q 039408 291 SSVVFLCFGSMGSFV-GPQLREIAIGLQRV----GFRFLWSIREPSKSK-IYL---PGEYTNLKVKEMLPE-G---FLNR 357 (456)
Q Consensus 291 ~~vVyvsfGS~~~~~-~~~~~~l~~al~~~----~~~~vw~~~~~~~~~-~~~---~~~~~n~~~~~~lP~-~---f~~~ 357 (456)
++.++++.|...... .+.+..+++++... +..+|+...+..... ... -...+|+++.+.++. . +..+
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ 282 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMN 282 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHh
Confidence 468888888764433 34566777777653 567777654321000 001 011245544444432 1 1111
Q ss_pred c-----CCcee---EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 358 T-----AGVGL---SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 358 ~-----g~~G~---al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
. ..+|+ |.++|+|+|+++-..+-+. .++. |.++.+. .+.++|.+++.++++
T Consensus 283 adlvvt~SGgv~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~-----------~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 283 AFCILSDSGTITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG-----------FKAERVLQAVKTITE 341 (385)
T ss_dssp CSEEEECCTTHHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC-----------SSHHHHHHHHHHHHT
T ss_pred CcEEEECCccHHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC-----------CCHHHHHHHHHHHHh
Confidence 1 12223 9999999999986544222 2455 8776554 378999999999997
No 35
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=96.29 E-value=0.12 Score=55.12 Aligned_cols=45 Identities=13% Similarity=0.085 Sum_probs=34.0
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhc
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLM 423 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl 423 (456)
|+++|+|+|+. |.......+.+. +.|+.++. -+.++++++|.+++
T Consensus 684 AMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p----------~D~e~LA~aI~~lL 728 (816)
T 3s28_A 684 AMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP----------YHGDQAADTLADFF 728 (816)
T ss_dssp HHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT----------TSHHHHHHHHHHHH
T ss_pred HHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC----------CCHHHHHHHHHHHH
Confidence 99999999985 555566666554 67887773 47888999987766
No 36
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=95.84 E-value=0.0043 Score=57.77 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=65.0
Q ss_pred CeEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCC---CCccccccccccCchh---------HHhhc
Q 039408 291 SSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYL---PGEYTNLKVKEMLPEG---------FLNRT 358 (456)
Q Consensus 291 ~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~---~~~~~n~~~~~~lP~~---------f~~~~ 358 (456)
.+.|+|+||.... ......++++|.... ++..+.+...+....+ .....|+.+..+.++- .+++
T Consensus 157 ~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~- 232 (282)
T 3hbm_A 157 KYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIIS- 232 (282)
T ss_dssp CEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEE-
T ss_pred CCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEEC-
Confidence 4679999997532 234556777776644 4555655542110000 0011245444444321 3333
Q ss_pred CCcee---EEeeCcceeccccccccchhHHHHHHhhcceEEecc
Q 039408 359 AGVGL---SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRL 399 (456)
Q Consensus 359 g~~G~---al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 399 (456)
|| ++ +++.|+|+|.+|...+|..||+.+++. |+++.+..
T Consensus 233 gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 233 AS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp SS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred Cc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 33 34 999999999999999999999999998 99998874
No 37
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=94.81 E-value=3.1 Score=40.28 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=43.8
Q ss_pred ccccccccccCchh----HHhh---------cCCcee----EE-------eeCcceeccccccccchhHHHHHHhhcceE
Q 039408 340 EYTNLKVKEMLPEG----FLNR---------TAGVGL----SL-------WYGVPIATWPLYAEQQMNAFELVKELRLAV 395 (456)
Q Consensus 340 ~~~n~~~~~~lP~~----f~~~---------~g~~G~----al-------~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~ 395 (456)
..+||.+.+++|.. +... ..+.|+ |+ ++|+|+|+-.. +.+. ..|+
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 34678777777743 2211 122333 99 99999999765 4443 5577
Q ss_pred E-ecccccCCCCCcccchHHHHHHHHHhcCCCh
Q 039408 396 E-IRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD 427 (456)
Q Consensus 396 ~-l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 427 (456)
. ++. -+.++++++|.++++ ++
T Consensus 332 l~v~~----------~d~~~la~ai~~ll~-~~ 353 (406)
T 2hy7_A 332 FGYTP----------GNADSVIAAITQALE-AP 353 (406)
T ss_dssp EEECT----------TCHHHHHHHHHHHHH-CC
T ss_pred EEeCC----------CCHHHHHHHHHHHHh-Cc
Confidence 6 553 378999999999987 43
No 38
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=94.81 E-value=0.029 Score=47.90 Aligned_cols=125 Identities=10% Similarity=0.076 Sum_probs=72.0
Q ss_pred EEEeccCCcCCCHHHHHHHHHHHHhc-CCeEEEEEeCCCCCcc-CC-----CCccccccccccCchh----HHhh-----
Q 039408 294 VFLCFGSMGSFVGPQLREIAIGLQRV-GFRFLWSIREPSKSKI-YL-----PGEYTNLKVKEMLPEG----FLNR----- 357 (456)
Q Consensus 294 VyvsfGS~~~~~~~~~~~l~~al~~~-~~~~vw~~~~~~~~~~-~~-----~~~~~n~~~~~~lP~~----f~~~----- 357 (456)
+++.+|++. ....+..++++++.. +.+++++-........ .+ .+.++|+.+.+++++. ++..
T Consensus 25 ~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi~v 102 (177)
T 2f9f_A 25 FWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLL 102 (177)
T ss_dssp CEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCEEE
Confidence 344557764 233466677777776 5566554332211100 00 0123467777777753 1111
Q ss_pred ----cCCcee----EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHH
Q 039408 358 ----TAGVGL----SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEV 429 (456)
Q Consensus 358 ----~g~~G~----al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 429 (456)
..+.|+ |+++|+|+|+... ..+...+.+. +.|+.+ . -+.++++++|++++. +++.
T Consensus 103 ~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~----------~d~~~l~~~i~~l~~-~~~~ 165 (177)
T 2f9f_A 103 CTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N----------ADVNEIIDAMKKVSK-NPDK 165 (177)
T ss_dssp ECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C----------SCHHHHHHHHHHHHH-CTTT
T ss_pred eCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C----------CCHHHHHHHHHHHHh-CHHH
Confidence 123333 9999999998753 4555555544 677776 3 378999999999997 5543
Q ss_pred -HHHHHHHH
Q 039408 430 -RKKVKEMR 437 (456)
Q Consensus 430 -r~~A~~l~ 437 (456)
++++++.+
T Consensus 166 ~~~~~~~~a 174 (177)
T 2f9f_A 166 FKKDCFRRA 174 (177)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 55555544
No 39
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=89.23 E-value=0.27 Score=47.44 Aligned_cols=65 Identities=20% Similarity=0.214 Sum_probs=47.2
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC---hHHHHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD---DEVRKKVKEMREKS 440 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~---~~~r~~A~~l~~~~ 440 (456)
|+++|+|+|+-|..++.......+.+. |.++.+. +.++++++|.++++ | ..+.++|++..+.-
T Consensus 298 AmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------------d~~~La~ai~~ll~-d~~r~~mg~~ar~~~~~~ 363 (374)
T 2xci_A 298 PTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------------NETELVTKLTELLS-VKKEIKVEEKSREIKGCY 363 (374)
T ss_dssp HHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------------SHHHHHHHHHHHHH-SCCCCCHHHHHHHHHHHH
T ss_pred HHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------------CHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHhc
Confidence 999999999877777777766665555 7766543 56899999999997 4 25666666665554
Q ss_pred HH
Q 039408 441 RT 442 (456)
Q Consensus 441 ~~ 442 (456)
..
T Consensus 364 ~g 365 (374)
T 2xci_A 364 LE 365 (374)
T ss_dssp HH
T ss_pred cc
Confidence 33
No 40
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=88.25 E-value=0.32 Score=46.31 Aligned_cols=61 Identities=20% Similarity=0.207 Sum_probs=47.7
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCC--hHHHHHHHHHHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGD--DEVRKKVKEMREKSR 441 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~--~~~r~~A~~l~~~~~ 441 (456)
++++|+|+|+.+ ...++..+.+. |+|+.++ +.+++.++|.++.. + .++++||++.++.++
T Consensus 260 ymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~------------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~ 321 (339)
T 3rhz_A 260 FLAAGIPVIVQE----GIANQELIENN-GLGWIVK------------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILR 321 (339)
T ss_dssp HHHHTCCEEEET----TCTTTHHHHHH-TCEEEES------------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHH
T ss_pred HHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC------------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhh
Confidence 699999999865 56788888887 9999776 35788888888654 3 478888888887766
Q ss_pred H
Q 039408 442 T 442 (456)
Q Consensus 442 ~ 442 (456)
.
T Consensus 322 ~ 322 (339)
T 3rhz_A 322 K 322 (339)
T ss_dssp T
T ss_pred c
Confidence 3
No 41
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=87.89 E-value=2 Score=36.62 Aligned_cols=45 Identities=4% Similarity=0.029 Sum_probs=34.3
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
|+++|+|+|+... ..+...+ .. +.|+.++. -+.++++++|.+++.
T Consensus 135 a~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~----------~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 135 AMCLGAIPIASAV----GGLRDII-TN-ETGILVKA----------GDPGELANAILKALE 179 (200)
T ss_dssp HHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT----------TCHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEeCC----CChHHHc-CC-CceEEecC----------CCHHHHHHHHHHHHh
Confidence 9999999998754 3455555 44 67877763 478999999999985
No 42
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=85.69 E-value=2.3 Score=44.77 Aligned_cols=86 Identities=22% Similarity=0.341 Sum_probs=56.6
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCccCC-------CCccccccccccCch-hHHhhcC--
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREPSKSKIYL-------PGEYTNLKVKEMLPE-GFLNRTA-- 359 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~~~~~~~~~~-------~~~~~n~~~~~~lP~-~f~~~~g-- 359 (456)
+..|||.||-+..-.+++.+...++.|++.+.-.+|.++.+......+ .-.++.+.+....|. .++.+..
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~ 600 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLA 600 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCC
Confidence 456999999998889999999999999999888899887541100000 001233444444442 2333221
Q ss_pred ---------Ccee----EEeeCcceeccc
Q 039408 360 ---------GVGL----SLWYGVPIATWP 375 (456)
Q Consensus 360 ---------~~G~----al~~GVP~v~~P 375 (456)
++|+ ||++|||+|+++
T Consensus 601 Di~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 601 DVCLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp SEEECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred eEEeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 2223 999999999999
No 43
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=84.35 E-value=0.98 Score=42.79 Aligned_cols=53 Identities=19% Similarity=0.198 Sum_probs=41.5
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRK 431 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~ 431 (456)
|+++|+|+|+... ..+...+.+. +.|+.++. .-+.++++++|.++++ |++.++
T Consensus 290 a~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~---------~~~~~~l~~~i~~l~~-~~~~~~ 342 (374)
T 2iw1_A 290 AITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE---------PFSQEQLNEVLRKALT-QSPLRM 342 (374)
T ss_dssp HHHHTCCEEEETT----STTTHHHHHH-TCEEEECS---------SCCHHHHHHHHHHHHH-CHHHHH
T ss_pred HHHCCCCEEEecC----CCchhhhccC-CceEEeCC---------CCCHHHHHHHHHHHHc-ChHHHH
Confidence 9999999999765 4566777776 88988861 2478999999999998 764443
No 44
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=84.29 E-value=0.77 Score=43.15 Aligned_cols=40 Identities=18% Similarity=0.166 Sum_probs=31.8
Q ss_pred CCCcEEEEEcCC----------------CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTP----------------EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~----------------~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+++||+++... ..|.-.-...|++.|.++||+ |++++..
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~--v~v~~~~ 56 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHE--VFLLGAP 56 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCE--EEEESCT
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCe--EEEEecC
Confidence 788889999865 256677889999999999988 9999865
No 45
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=83.55 E-value=2.7 Score=43.10 Aligned_cols=36 Identities=8% Similarity=-0.061 Sum_probs=29.2
Q ss_pred eEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEE
Q 039408 292 SVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSI 327 (456)
Q Consensus 292 ~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~ 327 (456)
.|+|.+|++..-.+++.++..++.|++.+...+|..
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~ 476 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHF 476 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEE
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 688888888877788888888888888777777753
No 46
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=82.84 E-value=7.4 Score=36.59 Aligned_cols=52 Identities=21% Similarity=0.123 Sum_probs=38.4
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKK 432 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~ 432 (456)
|+++|+|+|+....+.. ..+.+. |.|+.++ .+.++++++|.++++ |++.+++
T Consensus 297 A~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~-----------~d~~~la~~i~~ll~-~~~~~~~ 348 (375)
T 3beo_A 297 APSLGVPVLVLRDTTER----PEGIEA-GTLKLAG-----------TDEETIFSLADELLS-DKEAHDK 348 (375)
T ss_dssp HHHHTCCEEECSSCCSC----HHHHHT-TSEEECC-----------SCHHHHHHHHHHHHH-CHHHHHH
T ss_pred HHhcCCCEEEecCCCCC----ceeecC-CceEEcC-----------CCHHHHHHHHHHHHh-ChHhHhh
Confidence 99999999998543333 234555 8887665 278999999999998 7755543
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=81.65 E-value=2.2 Score=35.01 Aligned_cols=50 Identities=12% Similarity=0.157 Sum_probs=30.5
Q ss_pred EEeeCc-ceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 364 SLWYGV-PIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 364 al~~GV-P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
|+++|+ |+|+....+ .....+.+. +. .+. .-+.++++++|.+++. +++.+
T Consensus 94 ama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~----------~~~~~~l~~~i~~l~~-~~~~~ 144 (166)
T 3qhp_A 94 AISVGIVPVIANSPLS---ATRQFALDE-RS--LFE----------PNNAKDLSAKIDWWLE-NKLER 144 (166)
T ss_dssp HHHTTCCEEEECCTTC---GGGGGCSSG-GG--EEC----------TTCHHHHHHHHHHHHH-CHHHH
T ss_pred HHhcCCCcEEeeCCCC---chhhhccCC-ce--EEc----------CCCHHHHHHHHHHHHh-CHHHH
Confidence 999995 999933211 122222222 22 223 2478999999999998 76443
No 48
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=79.57 E-value=3.8 Score=39.33 Aligned_cols=35 Identities=6% Similarity=0.147 Sum_probs=25.3
Q ss_pred EEEEEc--CC-CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLIC--TP-EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~--~~-~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
||++++ +| .-|--.-...|+++|+++ |+ |++++..
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~--V~v~~~~ 39 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HE--VIVFGIH 39 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SE--EEEEEES
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CC--eEEEeec
Confidence 366664 23 344556788999999999 99 8888754
No 49
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=76.62 E-value=2.6 Score=40.64 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=32.2
Q ss_pred CCCcEEEEEcCC--CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTP--EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~--~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+++||+++... .-|+-..+..|++.|.++||+ |++++..
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~--v~v~~~~ 79 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIE--ARWFVIE 79 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCE--EEEEECC
T ss_pred hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCe--EEEEEcc
Confidence 567788887664 357788899999999999988 8887754
No 50
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=73.67 E-value=2 Score=40.64 Aligned_cols=38 Identities=11% Similarity=0.215 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcC-C-CceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNR-D-RRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~r-G-H~~~Vt~~t~~ 42 (456)
++++|++++ ++.++......|+++|.++ | |+ |.++++.
T Consensus 7 ~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~--v~~~~~~ 46 (375)
T 3beo_A 7 ERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIE--SIVTVTA 46 (375)
T ss_dssp SCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEE--EEEEECC
T ss_pred cCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCC--eEEEEcC
Confidence 346899887 4467888888999999987 4 55 6666653
No 51
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=73.63 E-value=2.7 Score=39.30 Aligned_cols=45 Identities=16% Similarity=0.047 Sum_probs=33.4
Q ss_pred EEeeCcceeccccccccchhHHHHHH--hhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVK--ELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~--~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
|+++|+|+|+... ..+...+.+ . +.|+.++ . +.++++++|.++++
T Consensus 261 Ama~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~----------~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 261 AAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD----------F-APDEARRTLAGLPA 307 (342)
T ss_dssp HHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC----------C-CHHHHHHHHHTSCC
T ss_pred HHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC----------C-CHHHHHHHHHHHHH
Confidence 9999999999875 345555554 3 4565444 4 88999999999885
No 52
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=67.68 E-value=6.6 Score=31.57 Aligned_cols=40 Identities=20% Similarity=0.056 Sum_probs=35.9
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|++.+|++.+.+.-+|-....=++..|..+|++ |.++...
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~--Vi~lG~~ 40 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFN--VVNIGVL 40 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCE--EEEEEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCE--EEECCCC
Confidence 787899999999999999999999999999955 9988654
No 53
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=65.17 E-value=26 Score=35.08 Aligned_cols=39 Identities=10% Similarity=0.036 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCCcC--HHHHHHHHHH--HHcCCCceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGN--LVPLVEFAHL--LTNRDRRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH--~~P~l~La~~--L~~rGH~~~Vt~~t~~ 42 (456)
+++||+++.....+| -.-+..|++. |.+.||+ |++++..
T Consensus 204 ~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~--v~~~~~~ 246 (568)
T 2vsy_A 204 GPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQ--MHLFATS 246 (568)
T ss_dssp SCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEE--EEEEESS
T ss_pred CCeEEEEECcccccChHHHHHHHHHhhccCCcccEE--EEEEECC
Confidence 356899998766555 3557889999 7788966 8888753
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=63.62 E-value=3.8 Score=41.47 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=27.8
Q ss_pred CcEEEEEcC--------CCCcCHHHHHHHHHHHHcCCCceEEEEEEcCC
Q 039408 3 KFRVVLICT--------PEMGNLVPLVEFAHLLTNRDRRFCATVLIMTV 43 (456)
Q Consensus 3 ~~~il~~~~--------~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~ 43 (456)
++||+++++ ++.|+ -.-+|+++|+++||+ |+++++..
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLad--vv~~L~~aL~~~G~~--V~Vi~P~Y 53 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGD--VLGGLPPAMAANGHR--VMVISPRY 53 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHH--HHHHHHHHHHTTTCE--EEEEEECC
T ss_pred CcEEEEEEEeccchhccCcHHH--HHHHHHHHHHHcCCe--EEEEecCc
Confidence 578999963 22233 356899999999988 99998754
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=63.29 E-value=4.1 Score=39.64 Aligned_cols=52 Identities=19% Similarity=0.102 Sum_probs=34.1
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKK 432 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~ 432 (456)
|+++|+|+|+ -..+ ....+.+. ..|+-++. -+.++++++|.++++ |++.|++
T Consensus 334 AmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~----------~d~~~la~ai~~ll~-~~~~~~~ 385 (413)
T 2x0d_A 334 MAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ----------LNPENIAETLVELCM-SFNNRDV 385 (413)
T ss_dssp HHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS----------CSHHHHHHHHHHHHH-HTC----
T ss_pred HHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC----------CCHHHHHHHHHHHHc-CHHHHHH
Confidence 9999999998 3222 22333333 46776763 478999999999998 7666655
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=61.79 E-value=50 Score=30.47 Aligned_cols=38 Identities=13% Similarity=0.189 Sum_probs=32.5
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
||+++.....|++.-...+.+.|.++-.+++|++++.+
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~ 39 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPA 39 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECG
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECc
Confidence 59999999999999999999999987333669999975
No 57
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=56.76 E-value=6.1 Score=37.95 Aligned_cols=49 Identities=22% Similarity=0.345 Sum_probs=35.0
Q ss_pred EEeeCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVR 430 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r 430 (456)
|+++|+|+|+.+. ..+...+.+. +.|+.++ +.++++++|.+++. |++.+
T Consensus 335 Ama~G~PvI~~~~----~g~~e~i~~~-~~g~l~~------------d~~~la~~i~~ll~-~~~~~ 383 (416)
T 2x6q_A 335 AMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR------------DANEAVEVVLYLLK-HPEVS 383 (416)
T ss_dssp HHHTTCCEEEESC----HHHHHHCCBT-TTEEEES------------SHHHHHHHHHHHHH-CHHHH
T ss_pred HHHcCCCEEEccC----CCChhheecC-CCeEEEC------------CHHHHHHHHHHHHh-CHHHH
Confidence 9999999999764 3455555443 5665443 57899999999998 76443
No 58
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=55.80 E-value=65 Score=30.11 Aligned_cols=39 Identities=18% Similarity=0.241 Sum_probs=34.0
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
.+|+++-....|++.-.+.+.+.|.++=++.+|++++.+
T Consensus 9 ~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~ 47 (349)
T 3tov_A 9 KRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDE 47 (349)
T ss_dssp CEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEG
T ss_pred CEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECc
Confidence 479999999999999999999999998334669999976
No 59
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=54.65 E-value=6.9 Score=36.71 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=28.1
Q ss_pred EEEEcC---CCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 6 VVLICT---PEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 6 il~~~~---~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+++.. +.-|.-.-...|+++|+++||+ |++++..
T Consensus 3 Il~i~~~~~~~gG~~~~~~~l~~~L~~~G~~--V~v~~~~ 40 (374)
T 2iw1_A 3 VAFCLYKYFPFGGLQRDFMRIASTVAARGHH--VRVYTQS 40 (374)
T ss_dssp EEEECSEECTTCHHHHHHHHHHHHHHHTTCC--EEEEESE
T ss_pred EEEEEeecCCCcchhhHHHHHHHHHHhCCCe--EEEEecC
Confidence 666643 4567778899999999999999 9998864
No 60
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=50.49 E-value=11 Score=30.53 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEc
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIM 41 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~ 41 (456)
|.+.|++++= .|++- ..+++.|.++||+ |+++..
T Consensus 1 ~~~~~vlI~G---~G~vG--~~la~~L~~~g~~--V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCG---HSILA--INTILQLNQRGQN--VTVISN 34 (153)
T ss_dssp CCCSCEEEEC---CSHHH--HHHHHHHHHTTCC--EEEEEC
T ss_pred CCCCcEEEEC---CCHHH--HHHHHHHHHCCCC--EEEEEC
Confidence 7777899883 36554 7889999999988 988875
No 61
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=50.49 E-value=13 Score=36.48 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=27.2
Q ss_pred EEEEEcCC------CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTP------EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~------~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
||++++.. .-|=-.-...|++.|+++||+ |+++++.
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~--V~vi~~~ 43 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVR--TRTLIPG 43 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCE--EEEEEEC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCe--EEEEecc
Confidence 47777652 234446778999999999988 9999864
No 62
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=49.35 E-value=24 Score=32.15 Aligned_cols=31 Identities=10% Similarity=0.184 Sum_probs=25.0
Q ss_pred EEEEcCC----CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 6 VVLICTP----EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 6 il~~~~~----~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+|.+=+ +.||+.=.+.||++|. + |+|++..
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~----~--v~F~~~~ 37 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS----D--VSFACLP 37 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS----S--EEEEECC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH----h--CEEEEec
Confidence 5555444 6899999999999999 5 9999854
No 63
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=47.75 E-value=15 Score=36.07 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=26.7
Q ss_pred EEEEEcCC------CCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 5 RVVLICTP------EMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~------~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
||++++.. .-|=-.=...|+++|+++||+ |+++++.
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~--V~vi~~~ 43 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVD--ARVLLPA 43 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCE--EEEEEEC
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCE--EEEEecC
Confidence 47777642 233346678899999999988 9999864
No 64
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=46.63 E-value=75 Score=26.50 Aligned_cols=35 Identities=11% Similarity=0.183 Sum_probs=28.9
Q ss_pred EEEE-cCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 6 VVLI-CTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 6 il~~-~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+++ +-++.|=..-...||..|+++|++ |.++-.+
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~g~~--vlliD~D 39 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRSGYN--IAVVDTD 39 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCCCe--EEEEECC
Confidence 4444 457899999999999999999977 8888764
No 65
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=46.62 E-value=16 Score=21.26 Aligned_cols=28 Identities=11% Similarity=0.302 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 039408 413 EEIEWGLRRLMDGDDEVRKKVKEMREKS 440 (456)
Q Consensus 413 ~~l~~ai~~vl~~~~~~r~~A~~l~~~~ 440 (456)
.+|.+.|.++|.++.+....+.++++.+
T Consensus 4 nQLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 4 XQLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 4688899999986789999999998876
No 66
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=45.98 E-value=21 Score=30.08 Aligned_cols=36 Identities=11% Similarity=0.144 Sum_probs=29.6
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
.||++.-.++.|=+. .++|.+.|.++|++ |.++.++
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~--V~vv~T~ 41 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDE--VNVIAST 41 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSE--EEEEECT
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCE--EEEEECc
Confidence 378888888877665 89999999999977 8888765
No 67
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=43.97 E-value=1.5e+02 Score=25.21 Aligned_cols=36 Identities=8% Similarity=0.051 Sum_probs=31.6
Q ss_pred cEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEc
Q 039408 4 FRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIM 41 (456)
Q Consensus 4 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~ 41 (456)
..|.+++-.+.|-..-.+.+|.+.+.+|++ |.|+..
T Consensus 29 g~i~v~tG~GkGKTTaA~GlalRA~g~G~r--V~~vQF 64 (196)
T 1g5t_A 29 GIIIVFTGNGKGKTTAAFGTAARAVGHGKN--VGVVQF 64 (196)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHHTTCC--EEEEES
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHCCCe--EEEEEe
Confidence 468899999999999999999999999977 888853
No 68
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=43.48 E-value=19 Score=20.93 Aligned_cols=29 Identities=7% Similarity=0.160 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 413 EEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 413 ~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
.+|++.|++++.++......+.++++.+.
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~~ll~ 32 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLAKAVG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 47889999999756788888888888764
No 69
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=42.22 E-value=47 Score=26.26 Aligned_cols=33 Identities=12% Similarity=0.135 Sum_probs=24.4
Q ss_pred CCeeEEEEcCCCcc--HHHHHHHh-------CCCeEEEeccc
Q 039408 120 DRVAGLFIDMFCTS--MTDVANQL-------GIPCYLYFASP 152 (456)
Q Consensus 120 ~~~d~vI~D~~~~~--~~~~A~~l-------giP~v~~~~~~ 152 (456)
.+||+||.|..++. +..+++++ .+|.+.++...
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 37999999999885 56666544 58888776544
No 70
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=41.54 E-value=2.4e+02 Score=27.32 Aligned_cols=37 Identities=11% Similarity=0.241 Sum_probs=32.4
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTV 43 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~ 43 (456)
.|+++-.++.|=..=...||..|+++|++ |.++..+.
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~k--Vllv~~D~ 138 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYK--VGVVCSDT 138 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCC--EEEEECCC
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCe--EEEEeCCC
Confidence 57777888999999999999999999977 98888763
No 71
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=41.43 E-value=32 Score=29.80 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=31.7
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
++.||++.-.++.|-+. ..+|.+.|.++|++ |.++.++
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~e--V~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEERE--VHFLISK 40 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCE--EEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCE--EEEEECc
Confidence 34579999889988887 89999999999977 8888765
No 72
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=37.35 E-value=34 Score=20.16 Aligned_cols=31 Identities=13% Similarity=0.222 Sum_probs=25.2
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHHHh
Q 039408 413 EEIEWGLRRLMDGDDEVRKKVKEMREKSRTA 443 (456)
Q Consensus 413 ~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a 443 (456)
.+|.+.|++++.++......+.++++.+.+.
T Consensus 4 nQLE~KVEeLl~~~~~Le~eV~RLk~ll~~~ 34 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNKVARLKKKNAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 4688899999975678999999999887653
No 73
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=37.16 E-value=27 Score=20.12 Aligned_cols=29 Identities=10% Similarity=0.138 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 413 EEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 413 ~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
.+|.+.|+++|.++.+...-+.++++.+.
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 36888899999766788888888888763
No 74
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=37.13 E-value=4.8 Score=39.16 Aligned_cols=38 Identities=11% Similarity=0.243 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCC-----cCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 3 KFRVVLICTPEM-----GNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 3 ~~~il~~~~~~~-----GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
++||+++..... |=.+-...||++|+++||+ |++++..
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~Ghe--V~Vvt~~ 88 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFK--KRIILTD 88 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCE--EEEEESS
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCc--eEEEEec
Confidence 457887774422 3335589999999999988 9999875
No 75
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=34.88 E-value=88 Score=27.42 Aligned_cols=38 Identities=18% Similarity=0.334 Sum_probs=33.6
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+++|++.--|+.|-..=++.+|.+|+++|++ |.++..+
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~--V~v~d~D 43 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVR--VMAGVVE 43 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCC--EEEEECC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCC--EEEEEeC
Confidence 4678999999999999999999999999977 8777664
No 76
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=34.66 E-value=21 Score=30.29 Aligned_cols=49 Identities=4% Similarity=0.066 Sum_probs=32.2
Q ss_pred ccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCCh------HHHHHHHHHHHHHHH
Q 039408 379 EQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDD------EVRKKVKEMREKSRT 442 (456)
Q Consensus 379 DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~------~~r~~A~~l~~~~~~ 442 (456)
+.+..+.+-.+. |||+ .+|+|+|+++|.+++.++. .|+ +.-.+-..+|+
T Consensus 100 ~~id~~~Fe~~c-GVGV-------------~VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~ 154 (187)
T 3tl4_X 100 EASTKMGMNENS-GVGI-------------EITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKN 154 (187)
T ss_dssp GGCCHHHHHHTT-TTTC-------------CCCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHT
T ss_pred CCCCHHHHHHHC-CCCe-------------EeCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhc
Confidence 444555555555 8887 4788999999999996332 455 55555555554
No 77
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=34.57 E-value=1.5e+02 Score=28.73 Aligned_cols=37 Identities=16% Similarity=0.288 Sum_probs=32.6
Q ss_pred EEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCC
Q 039408 6 VVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVP 44 (456)
Q Consensus 6 il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~ 44 (456)
+++..-|+.|=..-.+.+|...+.+|.. |.|++.+-.
T Consensus 200 iiIaG~pG~GKTtlal~ia~~~a~~g~~--vl~fSlEms 236 (444)
T 3bgw_A 200 VLIAARPSMGKTAFALKQAKNMSDNDDV--VNLHSLEMG 236 (444)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHHTTCE--EEEECSSSC
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHcCCE--EEEEECCCC
Confidence 7888889999999999999999999855 999988744
No 78
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=34.51 E-value=32 Score=19.95 Aligned_cols=29 Identities=10% Similarity=0.131 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 413 EEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 413 ~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
.+|.+.|+++|.++.+...-+.++++.+.
T Consensus 4 nQLEdKVEeLl~~~~~Le~EV~RLk~ll~ 32 (34)
T 3c3f_A 4 XQIEXKLEXILSXLYHXENEXARIXKLLX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 46888899999756788888888888763
No 79
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=33.94 E-value=27 Score=34.12 Aligned_cols=52 Identities=13% Similarity=0.024 Sum_probs=35.6
Q ss_pred EEeeCcceeccccccccchhHHHHHHhh---------cceEEecccccCCCCCcccchHHHHHHHHHhc---CCChHHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKEL---------RLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLM---DGDDEVRK 431 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl---~~~~~~r~ 431 (456)
|+++|+|+|+... ..+...+. .- +.|+.++. -+.++++++|.+++ . |++.++
T Consensus 386 Ama~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~----------~d~~~la~~i~~ll~~~~-~~~~~~ 449 (485)
T 2qzs_A 386 GLKYGTLPLVRRT----GGLADTVS-DCSLENLADGVASGFVFED----------SNAWSLLRAIRRAFVLWS-RPSLWR 449 (485)
T ss_dssp HHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEECS----------SSHHHHHHHHHHHHHHHT-SHHHHH
T ss_pred HHHCCCCEEECCC----CCccceec-cCccccccccccceEEECC----------CCHHHHHHHHHHHHHHcC-CHHHHH
Confidence 9999999998754 23333333 21 36776663 47899999999998 5 664443
No 80
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=33.63 E-value=25 Score=20.34 Aligned_cols=28 Identities=11% Similarity=0.244 Sum_probs=22.9
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 414 EIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 414 ~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
+|.+.|.++|.++.....-+.++++.+.
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~Ll~ 31 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKKLVG 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 6788899999767789999998888753
No 81
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=33.24 E-value=51 Score=29.46 Aligned_cols=40 Identities=20% Similarity=-0.015 Sum_probs=35.1
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVP 44 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~ 44 (456)
+.+|++.+.++-.|-....-++..|..+|++ |.++....+
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~--Vi~LG~~vp 162 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYN--VVDLGRDVP 162 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCE--EEEEEEECC
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCE--EEECCCCCC
Confidence 4589999999999999999999999999965 998876544
No 82
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=33.17 E-value=39 Score=29.00 Aligned_cols=40 Identities=13% Similarity=-0.095 Sum_probs=34.8
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVP 44 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~ 44 (456)
+.+|++.+.++-.|-....-++..|..+|++ |.++....+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~--v~~LG~~vp 127 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFT--VYNLGVDIE 127 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCE--EEECCSSBC
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCE--EEECCCCCC
Confidence 3479999999999999999999999999966 998876533
No 83
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=32.96 E-value=31 Score=28.44 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=33.6
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+.+|++.+.+.-+|-....-++..|..+|++ |.++...
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~e--Vi~lG~~ 55 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFE--VVYTGLR 55 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCE--EECCCSB
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCE--EEECCCC
Confidence 5689999999999999999999999999966 9887644
No 84
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=32.49 E-value=45 Score=28.87 Aligned_cols=37 Identities=16% Similarity=0.304 Sum_probs=30.8
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
++.||++.-.++.+-+. ...|.+.|.++| + |.++.++
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~--V~vv~T~ 54 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-E--VRAVVTK 54 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-E--EEEEECT
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-C--EEEEEcc
Confidence 35589999999998776 899999999998 7 7777765
No 85
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=31.80 E-value=30 Score=33.79 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=34.8
Q ss_pred EEeeCcceeccccccccchhHHHHHHhh---------cceEEecccccCCCCCcccchHHHHHHHHHhc---CCChHHH
Q 039408 364 SLWYGVPIATWPLYAEQQMNAFELVKEL---------RLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLM---DGDDEVR 430 (456)
Q Consensus 364 al~~GVP~v~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl---~~~~~~r 430 (456)
|+++|+|+|+... ..+...+. .- +.|+.++. -+.++++++|.+++ . |++.+
T Consensus 385 Ama~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~----------~d~~~la~~i~~ll~~~~-~~~~~ 447 (485)
T 1rzu_A 385 ALRYGCIPVVART----GGLADTVI-DANHAALASKAATGVQFSP----------VTLDGLKQAIRRTVRYYH-DPKLW 447 (485)
T ss_dssp HHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEESS----------CSHHHHHHHHHHHHHHHT-CHHHH
T ss_pred HHHCCCCEEEeCC----CChhheec-ccccccccccCCcceEeCC----------CCHHHHHHHHHHHHHHhC-CHHHH
Confidence 9999999999764 23333333 21 36776662 47899999999998 6 65433
No 86
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=31.08 E-value=44 Score=26.00 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=26.6
Q ss_pred hHHHHHHHHHhhcCCCCCCCCeeEEEEcCCCcc--HHHHHH---HhCCCeEEE
Q 039408 101 HVKNEITNLIETESDSEDSDRVAGLFIDMFCTS--MTDVAN---QLGIPCYLY 148 (456)
Q Consensus 101 ~~~~~l~~l~~~~~~~~~~~~~d~vI~D~~~~~--~~~~A~---~lgiP~v~~ 148 (456)
...+.++.+.+ .+||+||.|..++. +..+++ +.++|.+.+
T Consensus 41 ~g~eAl~~~~~--------~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 41 RMQEALDIARK--------GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp CHHHHHHHHHH--------CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred CHHHHHHHHHh--------CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 34555554443 48999999998875 455554 457887654
No 87
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=30.38 E-value=85 Score=24.08 Aligned_cols=37 Identities=14% Similarity=0.138 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCCcCH--HHHHHHHHHHHcCCCceEEEEEE
Q 039408 1 MKKFRVVLICTPEMGNL--VPLVEFAHLLTNRDRRFCATVLI 40 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~--~P~l~La~~L~~rGH~~~Vt~~t 40 (456)
|||. +.++..+-.|+- .=-+++|..+.+.||+ |.++-
T Consensus 1 Mkk~-~~vv~~~P~g~~~~~~al~~a~a~~a~~~~--v~vff 39 (119)
T 2d1p_B 1 MKRI-AFVFSTAPHGTAAGREGLDALLATSALTDD--LAVFF 39 (119)
T ss_dssp CCCE-EEEECSCTTTSTHHHHHHHHHHHHHTTCSC--EEEEE
T ss_pred CcEE-EEEEcCCCCCcHHHHHHHHHHHHHHhCCCC--EEEEE
Confidence 7775 444455555665 6667899999999998 55544
No 88
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=30.24 E-value=58 Score=26.78 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=22.2
Q ss_pred EEEEeccCCcCCCHHHHHHHHHHHHhcC
Q 039408 293 VVFLCFGSMGSFVGPQLREIAIGLQRVG 320 (456)
Q Consensus 293 vVyvsfGS~~~~~~~~~~~l~~al~~~~ 320 (456)
+.|+|+||....+.+.++..+..|.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999997766677888888887753
No 89
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=29.87 E-value=78 Score=26.01 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=24.0
Q ss_pred EEEEeccCCcCCCHHHHHHHHHHHHhcC
Q 039408 293 VVFLCFGSMGSFVGPQLREIAIGLQRVG 320 (456)
Q Consensus 293 vVyvsfGS~~~~~~~~~~~l~~al~~~~ 320 (456)
.+|+++||......+.++..+..|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999998888888998888888753
No 90
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=29.81 E-value=59 Score=26.71 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=23.0
Q ss_pred EEEEeccCCcCCCHHHHHHHHHHHHhcC
Q 039408 293 VVFLCFGSMGSFVGPQLREIAIGLQRVG 320 (456)
Q Consensus 293 vVyvsfGS~~~~~~~~~~~l~~al~~~~ 320 (456)
.+|+++||....+...++..+..|++..
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998777777888888888753
No 91
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=29.61 E-value=43 Score=28.94 Aligned_cols=38 Identities=11% Similarity=-0.015 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCCcCHHH-HHHHHHHHHcCCCceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGNLVP-LVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P-~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+..||++.-.++ +..+- .+.|.+.|.++|++ |.++.++
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~e--V~vv~T~ 42 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAE--VRPVVSY 42 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCE--EEEEECC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCE--EEEEEeh
Confidence 345788887776 55665 78999999999976 8888765
No 92
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=29.47 E-value=50 Score=23.42 Aligned_cols=48 Identities=19% Similarity=0.174 Sum_probs=33.7
Q ss_pred eCcceeccccccccchhHHH---HHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcC
Q 039408 367 YGVPIATWPLYAEQQMNAFE---LVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMD 424 (456)
Q Consensus 367 ~GVP~v~~P~~~DQ~~na~~---v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~ 424 (456)
.|.|+++.--.+.|.+.-.. ..+. |+...+-+ ..++|+|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlk---------stdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK---------STDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE---------CCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc---------cCCHHHHHHHHHHHHH
Confidence 68899988877777654332 3344 66666663 5789999999998774
No 93
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=29.23 E-value=48 Score=27.95 Aligned_cols=38 Identities=11% Similarity=0.213 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|.+ ||++.-.++.|=. =...|.+.|.++|++ |.++.++
T Consensus 1 ~~k-~IllgvTGs~aa~-k~~~l~~~L~~~g~~--V~vv~T~ 38 (181)
T 1g63_A 1 MYG-KLLICATASINVI-NINHYIVELKQHFDE--VNILFSP 38 (181)
T ss_dssp CCC-CEEEEECSCGGGG-GHHHHHHHHTTTSSC--EEEEECG
T ss_pred CCC-EEEEEEECHHHHH-HHHHHHHHHHHCCCE--EEEEEch
Confidence 444 5888877777666 578999999999988 7777765
No 94
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=28.89 E-value=95 Score=23.13 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=23.3
Q ss_pred CCeeEEEEcCCCcc--HHHHHHHh-------CCCeEEEeccc
Q 039408 120 DRVAGLFIDMFCTS--MTDVANQL-------GIPCYLYFASP 152 (456)
Q Consensus 120 ~~~d~vI~D~~~~~--~~~~A~~l-------giP~v~~~~~~ 152 (456)
.+||+||.|..++. +..+.+++ ++|.+.++...
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 47999999997764 55555543 57888776543
No 95
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=28.70 E-value=46 Score=28.60 Aligned_cols=38 Identities=11% Similarity=-0.043 Sum_probs=29.8
Q ss_pred CCcEEEEEcCCCCcCHH-HHHHHHHHHHcCCCceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGNLV-PLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~-P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
+..||++.-.++ +..+ =.+.|.+.|.++|++ |.++.++
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~e--V~vv~T~ 44 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAK--VTPFVTH 44 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCE--EEEECSS
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCE--EEEEECh
Confidence 345788887777 5555 789999999999977 8888765
No 96
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=28.57 E-value=62 Score=28.84 Aligned_cols=34 Identities=26% Similarity=0.287 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEc
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIM 41 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~ 41 (456)
|++++|+++ ++ |-+ --+|+++|.++||+ |+.++-
T Consensus 1 M~~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~--V~~~~r 34 (286)
T 3gpi_A 1 MSLSKILIA--GC-GDL--GLELARRLTAQGHE--VTGLRR 34 (286)
T ss_dssp -CCCCEEEE--CC-SHH--HHHHHHHHHHTTCC--EEEEEC
T ss_pred CCCCcEEEE--CC-CHH--HHHHHHHHHHCCCE--EEEEeC
Confidence 665567777 44 744 45789999999988 887764
No 97
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=28.46 E-value=30 Score=20.14 Aligned_cols=29 Identities=10% Similarity=0.241 Sum_probs=22.6
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 413 EEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 413 ~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
.+|.+.|+++|.++.++..-+.++++.+.
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk~lL~ 32 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 36888899999756788888888887753
No 98
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=27.85 E-value=72 Score=26.28 Aligned_cols=29 Identities=21% Similarity=0.084 Sum_probs=23.5
Q ss_pred eEEEEeccCCcCCCHHHHHHHHHHHHhcC
Q 039408 292 SVVFLCFGSMGSFVGPQLREIAIGLQRVG 320 (456)
Q Consensus 292 ~vVyvsfGS~~~~~~~~~~~l~~al~~~~ 320 (456)
..+|+++||........++..+..|.+..
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 46999999998777777888888888743
No 99
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=27.25 E-value=49 Score=25.00 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCC-CCcCHHHHHHHHHHHHcC-CC-ceEEEEEEc
Q 039408 1 MKKFRVVLICTP-EMGNLVPLVEFAHLLTNR-DR-RFCATVLIM 41 (456)
Q Consensus 1 m~~~~il~~~~~-~~GH~~P~l~La~~L~~r-GH-~~~Vt~~t~ 41 (456)
|+|.-|++...| +.......+.+|..+++. || + |+++-.
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~--v~vff~ 42 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLD--LRLFLM 42 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCE--EEEEEC
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCcc--EEEEEE
Confidence 666433333333 344567789999999999 98 7 666553
No 100
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=27.22 E-value=80 Score=26.71 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=30.2
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
|+ ||++.-.++.|-+ =...|.++|.++|++ |.++.++
T Consensus 1 mk--~IllgvTGs~aa~-k~~~l~~~L~~~g~~--V~vv~T~ 37 (189)
T 2ejb_A 1 MQ--KIALCITGASGVI-YGIKLLQVLEELDFS--VDLVISR 37 (189)
T ss_dssp CC--EEEEEECSSTTHH-HHHHHHHHHHHTTCE--EEEEECH
T ss_pred CC--EEEEEEECHHHHH-HHHHHHHHHHHCCCE--EEEEECh
Confidence 64 5999999998855 479999999999976 8888765
No 101
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=26.74 E-value=1.3e+02 Score=22.68 Aligned_cols=35 Identities=29% Similarity=0.440 Sum_probs=29.0
Q ss_pred eEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEEEEeCC
Q 039408 292 SVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLWSIREP 330 (456)
Q Consensus 292 ~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw~~~~~ 330 (456)
|-|||-|.| +|+.+.++..-+..-|+++++.+...
T Consensus 2 sqifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 2 SQIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp CEEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ceEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 357887765 78899999999999999999988764
No 102
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=26.22 E-value=1.1e+02 Score=25.71 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=17.8
Q ss_pred ChHHHHHHHHHHHHHHHhhccC
Q 039408 426 DDEVRKKVKEMREKSRTAVMEE 447 (456)
Q Consensus 426 ~~~~r~~A~~l~~~~~~a~~~g 447 (456)
|++++++-++.++..++.+.+.
T Consensus 156 d~~l~~kl~~~r~~~~~~v~~~ 177 (181)
T 4b4k_A 156 HDDIHDALELRREAIEKDVREG 177 (181)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHHh
Confidence 7889999988888888877553
No 103
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=26.22 E-value=70 Score=27.65 Aligned_cols=40 Identities=8% Similarity=-0.148 Sum_probs=35.1
Q ss_pred CcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcCCC
Q 039408 3 KFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMTVP 44 (456)
Q Consensus 3 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~~~ 44 (456)
+.+|++.+.++-.|-....-++..|..+|++ |.++....|
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~--Vi~LG~~vp 131 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQ--IVDLGVDVL 131 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCE--EEECCSSCC
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCe--EEEcCCCCC
Confidence 4589999999999999999999999999955 999876544
No 104
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=25.85 E-value=41 Score=19.57 Aligned_cols=29 Identities=7% Similarity=0.091 Sum_probs=22.9
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 413 EEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 413 ~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
.+|.+.++++|.++.+...-+.++++.+.
T Consensus 4 ~QLEdKVEeLl~~n~~Le~EV~RLk~LL~ 32 (34)
T 1uo4_A 4 KQIEDKGEEILSKLYHIENELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHc
Confidence 36788899998766788888888887753
No 105
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=25.65 E-value=46 Score=28.40 Aligned_cols=38 Identities=5% Similarity=0.115 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~~ 42 (456)
++.||++.-.++.|=.. ...|.+.|.++|++ |.++.++
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~--V~vv~T~ 44 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKE--IRVVMTK 44 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSE--EEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCE--EEEEEch
Confidence 34578888888887775 78999999999977 8777765
No 106
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=25.47 E-value=78 Score=26.03 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=23.0
Q ss_pred EEEEeccCCcCCCHHHHHHHHHHHHhcC
Q 039408 293 VVFLCFGSMGSFVGPQLREIAIGLQRVG 320 (456)
Q Consensus 293 vVyvsfGS~~~~~~~~~~~l~~al~~~~ 320 (456)
.+|+++||......+.++..+..|++..
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 4899999998777777888888888753
No 107
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=24.93 E-value=58 Score=18.94 Aligned_cols=29 Identities=3% Similarity=-0.036 Sum_probs=21.4
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 413 EEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 413 ~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
.+|++.|++++.++.....-+.++++.+-
T Consensus 4 nQledKvEel~~~~~~l~nEv~Rl~~lLg 32 (34)
T 2r2v_A 4 KQVADKLEEVASKLYHNANELARVAKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 46888899988745577777777777653
No 108
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=23.99 E-value=86 Score=18.44 Aligned_cols=31 Identities=6% Similarity=0.155 Sum_probs=24.4
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHHHh
Q 039408 413 EEIEWGLRRLMDGDDEVRKKVKEMREKSRTA 443 (456)
Q Consensus 413 ~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~a 443 (456)
.+|.+.|.+++.++.....-+.++++.+.+.
T Consensus 4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll~~~ 34 (36)
T 1kd8_A 4 KQLEAEVEEIESEVWHLENEVARLEKENAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhccc
Confidence 3678888898875678888899998887653
No 109
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=23.55 E-value=90 Score=26.64 Aligned_cols=35 Identities=11% Similarity=0.179 Sum_probs=28.9
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcC-CCceEEEEEEcC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNR-DRRFCATVLIMT 42 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~r-GH~~~Vt~~t~~ 42 (456)
||++.-.++.|-+. ...|.+.|.++ |++ |.++.++
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~--V~vv~T~ 37 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVE--THLVMSK 37 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCE--EEEEECH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCE--EEEEECc
Confidence 58888888877766 99999999999 977 8877765
No 110
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=23.28 E-value=84 Score=26.02 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=24.5
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEc
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIM 41 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~ 41 (456)
|++++|+++ ++.|-+ -.+|+++|.++||+ |+.++-
T Consensus 1 M~~~~ilVt--GatG~i--G~~l~~~l~~~g~~--V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIF--GATGQT--GLTTLAQAVQAGYE--VTVLVR 35 (206)
T ss_dssp CCCCEEEEE--STTSHH--HHHHHHHHHHTTCE--EEEEES
T ss_pred CCCCEEEEE--cCCcHH--HHHHHHHHHHCCCe--EEEEEe
Confidence 654456554 566654 46789999999977 887764
No 111
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=23.21 E-value=4.2e+02 Score=25.43 Aligned_cols=37 Identities=14% Similarity=0.269 Sum_probs=32.0
Q ss_pred EEEEEcCCCCcCHHHHHHHHHHHHcC-CCceEEEEEEcCC
Q 039408 5 RVVLICTPEMGNLVPLVEFAHLLTNR-DRRFCATVLIMTV 43 (456)
Q Consensus 5 ~il~~~~~~~GH~~P~l~La~~L~~r-GH~~~Vt~~t~~~ 43 (456)
.|+++..++.|-..=...||..|+++ |++ |.++..+.
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~k--Vllvd~D~ 139 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKK--VLVVSADV 139 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCC--EEEEECCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCe--EEEEecCC
Confidence 46677778999999999999999999 977 99988763
No 112
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=23.18 E-value=64 Score=31.10 Aligned_cols=46 Identities=20% Similarity=0.264 Sum_probs=34.6
Q ss_pred hHHhhhccCCCCeEEEEeccCCcCCCHHHHHHHHHHHHhcCCeEEE
Q 039408 280 SIMKWLDDQPPSSVVFLCFGSMGSFVGPQLREIAIGLQRVGFRFLW 325 (456)
Q Consensus 280 ~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~~l~~al~~~~~~~vw 325 (456)
...+|-...+.+.-|.|-++|+...+....+.++++|++.|.+.+.
T Consensus 254 ~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 254 HYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp HHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 3456665444444577789999987877788999999999988764
No 113
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=23.05 E-value=90 Score=27.83 Aligned_cols=40 Identities=13% Similarity=0.352 Sum_probs=30.5
Q ss_pred CCeEEEEeccCCcCCCHHHHHHHHHHHHhc--CCeEEEEEeC
Q 039408 290 PSSVVFLCFGSMGSFVGPQLREIAIGLQRV--GFRFLWSIRE 329 (456)
Q Consensus 290 ~~~vVyvsfGS~~~~~~~~~~~l~~al~~~--~~~~vw~~~~ 329 (456)
++.+++|+|||......+.+..+...+++. +.++-|.+..
T Consensus 9 ~~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 9 KTGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp CEEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred CceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 357999999998766666788888888764 5678888664
No 114
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=22.99 E-value=1.5e+02 Score=22.55 Aligned_cols=33 Identities=12% Similarity=0.208 Sum_probs=22.4
Q ss_pred CCeeEEEEcCCCcc--HHHHHHHh-------CCCeEEEeccc
Q 039408 120 DRVAGLFIDMFCTS--MTDVANQL-------GIPCYLYFASP 152 (456)
Q Consensus 120 ~~~d~vI~D~~~~~--~~~~A~~l-------giP~v~~~~~~ 152 (456)
.+||+||.|..++. +..+++++ .+|.++++...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 47999999997764 45554432 57888776543
No 115
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=22.77 E-value=94 Score=24.64 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=24.1
Q ss_pred CCCcEEEEEcCCCCcCHHHH--HHHHHHHHcCCCceEEEEEE
Q 039408 1 MKKFRVVLICTPEMGNLVPL--VEFAHLLTNRDRRFCATVLI 40 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~--l~La~~L~~rGH~~~Vt~~t 40 (456)
|||. +.++..+-.|+.... +++|..+++.||+ |+++-
T Consensus 5 Mkk~-~ivv~~~P~g~~~~~~al~~a~a~~a~~~~--v~Vff 43 (136)
T 2hy5_B 5 VKKF-MYLNRKAPYGTIYAWEALEVVLIGAAFDQD--VCVLF 43 (136)
T ss_dssp CCEE-EEEECSCTTTSSHHHHHHHHHHHHGGGCCE--EEEEE
T ss_pred hhEE-EEEEeCCCCCcHHHHHHHHHHHHHHhCCCC--EEEEE
Confidence 5553 444455556765554 7779999999988 55554
No 116
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=22.70 E-value=1.8e+02 Score=22.58 Aligned_cols=64 Identities=11% Similarity=0.099 Sum_probs=38.4
Q ss_pred eCcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 367 YGVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 367 ~GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
..+|+|++--..|. .......+. |+--.+. +.++.++|..+|+.++. ...+++..+++++.+.+
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~~-g~~~~l~---------kP~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~~~~ 137 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQD-GAYDFIA---------KPFAADRLVQSARRAEE-KRRLVMENRSLRRAAEA 137 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHHT-TCCEEEE---------SSCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHhc-CCCeEEe---------CCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 46788777544443 333444444 6644455 35899999999999987 54554444444444433
No 117
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=22.51 E-value=67 Score=30.00 Aligned_cols=36 Identities=14% Similarity=0.320 Sum_probs=27.9
Q ss_pred CCeEEEEeccCC---cCCCHHHHHHHHHHHHhcCCeEEE
Q 039408 290 PSSVVFLCFGSM---GSFVGPQLREIAIGLQRVGFRFLW 325 (456)
Q Consensus 290 ~~~vVyvsfGS~---~~~~~~~~~~l~~al~~~~~~~vw 325 (456)
++++|.+.-||. ..++.+.+.++++.|.+.|.++++
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl 222 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF 222 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE
Confidence 456888888875 367788899999988777888776
No 118
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=21.95 E-value=67 Score=27.65 Aligned_cols=38 Identities=21% Similarity=0.241 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCCcCHHHHHHHHHHHHc-CCCceEEEEEEcC
Q 039408 2 KKFRVVLICTPEMGNLVPLVEFAHLLTN-RDRRFCATVLIMT 42 (456)
Q Consensus 2 ~~~~il~~~~~~~GH~~P~l~La~~L~~-rGH~~~Vt~~t~~ 42 (456)
++.||++.-.++.+=+. ...|.+.|.+ +|++ |.++.++
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~--V~vv~T~ 56 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLE--VAVVTTE 56 (206)
T ss_dssp SSEEEEEEECSSGGGGT-HHHHHHHHC---CEE--EEEEECT
T ss_pred CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCE--EEEEECH
Confidence 45688888888887554 6999999999 8965 8888876
No 119
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=21.47 E-value=1.7e+02 Score=18.66 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=25.1
Q ss_pred cchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 410 VSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 410 ~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
+|.+++++-.++.-. ||.++.+-++++.++..
T Consensus 1 MskqEvK~E~Ke~EG-dP~iK~~~R~~~~e~a~ 32 (48)
T 3c01_A 1 MDKEEVKREMKEQEG-NPEVKSKRREVHMEILS 32 (48)
T ss_pred CCHHHHHHHHHhccC-CHHHHHHHHHHHHHHHH
Confidence 367888888888654 89999888888877764
No 120
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=21.20 E-value=2.4e+02 Score=21.20 Aligned_cols=63 Identities=6% Similarity=-0.039 Sum_probs=34.4
Q ss_pred CcceeccccccccchhHHHHHHhhcceEEecccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 039408 368 GVPIATWPLYAEQQMNAFELVKELRLAVEIRLDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSR 441 (456)
Q Consensus 368 GVP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~ 441 (456)
.+|+|++--..|.......+... |+---+. +.++.++|..+|++++. ....++..+++....+
T Consensus 72 ~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~---------KP~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~~~ 134 (139)
T 2jk1_A 72 ETVRIIITGYTDSASMMAAINDA-GIHQFLT---------KPWHPEQLLSSARNAAR-MFTLARENERLSLEMR 134 (139)
T ss_dssp TSEEEEEESCTTCHHHHHHHHHT-TCCEEEE---------SSCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHhh-chhhhcc---------CCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 45666654444433333333332 4533344 25899999999999886 4444444444444443
No 121
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=21.12 E-value=4.5e+02 Score=24.75 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=18.3
Q ss_pred CCeeEEEE--cCCCccHHHHHHHhCCCe
Q 039408 120 DRVAGLFI--DMFCTSMTDVANQLGIPC 145 (456)
Q Consensus 120 ~~~d~vI~--D~~~~~~~~~A~~lgiP~ 145 (456)
.++|.|+. |.....+..+|+++|+|.
T Consensus 74 ~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 74 FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 47888874 444445567889999983
No 122
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=20.86 E-value=3.5e+02 Score=22.22 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=42.2
Q ss_pred eeCcceeccccccccc-hhHHHHHH---hhcceEEec-ccccCCCCCcccchHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 039408 366 WYGVPIATWPLYAEQQ-MNAFELVK---ELRLAVEIR-LDYRDGRGSDLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKS 440 (456)
Q Consensus 366 ~~GVP~v~~P~~~DQ~-~na~~v~~---~~G~G~~l~-~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~ 440 (456)
..-.|.|++|...... ....++.- --|+++-.- .+.. +-.+...++..|-. +. |++++++-++.++..
T Consensus 81 ~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~a-----g~~nAa~lAa~Il~-~~-d~~l~~kl~~~r~~~ 153 (166)
T 3oow_A 81 KTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMA-----GAKNAALFAASILQ-HT-DINIAKALAEFRAEQ 153 (166)
T ss_dssp TCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHH-----HHHHHHHHHHHHHG-GG-CHHHHHHHHHHHHHH
T ss_pred ccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCc-----cchHHHHHHHHHHc-CC-CHHHHHHHHHHHHHH
Confidence 3458999999754321 12222211 114444322 1100 13455566655544 34 799999999999999
Q ss_pred HHhhccC
Q 039408 441 RTAVMEE 447 (456)
Q Consensus 441 ~~a~~~g 447 (456)
++.+.+.
T Consensus 154 ~~~v~~~ 160 (166)
T 3oow_A 154 TRFVLEN 160 (166)
T ss_dssp HHHHHTC
T ss_pred HHHHHhc
Confidence 9887654
No 123
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=20.58 E-value=59 Score=29.77 Aligned_cols=31 Identities=26% Similarity=0.264 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEE
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLI 40 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t 40 (456)
|+| |.|+=.+.+|. .+|+.|+++||+ |++..
T Consensus 3 M~k--IgfIGlG~MG~-----~mA~~L~~~G~~--v~v~d 33 (300)
T 3obb_A 3 MKQ--IAFIGLGHMGA-----PMATNLLKAGYL--LNVFD 33 (300)
T ss_dssp CCE--EEEECCSTTHH-----HHHHHHHHTTCE--EEEEC
T ss_pred cCE--EEEeeehHHHH-----HHHHHHHhCCCe--EEEEc
Confidence 665 99999999984 689999999987 88764
No 124
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=20.32 E-value=1e+02 Score=24.12 Aligned_cols=27 Identities=11% Similarity=0.221 Sum_probs=21.4
Q ss_pred CCcCHHHHHHHHHHHHcCCCceEEEEEEc
Q 039408 13 EMGNLVPLVEFAHLLTNRDRRFCATVLIM 41 (456)
Q Consensus 13 ~~GH~~P~l~La~~L~~rGH~~~Vt~~t~ 41 (456)
.......-+.||...++.||+ |+++-+
T Consensus 28 ~~~~~~~al~lA~~A~a~g~e--V~vFf~ 54 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASMEYE--TSVFFM 54 (134)
T ss_dssp GTHHHHHHHHHHHHHHHTTCE--EEEEEC
T ss_pred CHHHHHHHHHHHHHHHHCCCC--EEEEEE
Confidence 456778889999999999988 666544
No 125
>3bzy_A ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3bzl_A 3bzv_A 3bzx_A 3bzo_A 3bzz_A 3c03_B 3c00_A
Probab=20.21 E-value=1.9e+02 Score=18.91 Aligned_cols=34 Identities=9% Similarity=0.240 Sum_probs=28.2
Q ss_pred cccchHHHHHHHHHhcCCChHHHHHHHHHHHHHHH
Q 039408 408 DLVSAEEIEWGLRRLMDGDDEVRKKVKEMREKSRT 442 (456)
Q Consensus 408 ~~~~~~~l~~ai~~vl~~~~~~r~~A~~l~~~~~~ 442 (456)
-.+|.++|++-.++.-. ||.++.+-+++..++..
T Consensus 5 lkMskqEvK~E~Ke~EG-dP~iK~r~R~~~re~a~ 38 (54)
T 3bzy_A 5 ASMSKDEVKREAKDTDG-NPEIKGERRRLHSEIQS 38 (54)
T ss_pred cCCCHHHHHHHHHhccC-CHHHHHHHHHHHHHHHH
Confidence 36899999999998654 99999988888877764
No 126
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=20.11 E-value=55 Score=30.35 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCCcCHHHHHHHHHHHHcCCCceEEEEEEc
Q 039408 1 MKKFRVVLICTPEMGNLVPLVEFAHLLTNRDRRFCATVLIM 41 (456)
Q Consensus 1 m~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~~~Vt~~t~ 41 (456)
|+.++|+++=.++.| ..+|..|+++||+ |+++..
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~--V~~~~r 34 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEA--INVLAR 34 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCC--EEEECC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCE--EEEEEC
Confidence 666679999777777 4579999999988 998863
No 127
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=20.09 E-value=1.4e+02 Score=22.98 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=22.5
Q ss_pred CCeeEEEEcCCCcc--HHHHHHHh---------CCCeEEEeccc
Q 039408 120 DRVAGLFIDMFCTS--MTDVANQL---------GIPCYLYFASP 152 (456)
Q Consensus 120 ~~~d~vI~D~~~~~--~~~~A~~l---------giP~v~~~~~~ 152 (456)
.+||+||.|..++. +..+++++ .+|.++++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 47999999997764 55555543 27877776543
Done!