Query 039412
Match_columns 433
No_of_seqs 324 out of 1802
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 16:02:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039412.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039412hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 3.8E-62 1.3E-66 485.8 29.7 334 79-430 7-398 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 4.6E-61 1.6E-65 472.2 30.6 304 81-431 46-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 1.3E-61 4.6E-66 476.9 23.1 307 81-431 51-383 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 5.2E-60 1.8E-64 462.6 29.9 310 81-433 13-344 (351)
5 1dpj_A Proteinase A; proteinas 100.0 2.1E-59 7.3E-64 454.5 29.3 305 81-431 3-329 (329)
6 3cms_A Chymosin B; hydrolase, 100.0 5.6E-60 1.9E-64 457.3 23.8 300 81-431 4-323 (323)
7 3aup_A SBG7S, BG, basic 7S glo 100.0 6.9E-59 2.4E-63 462.7 30.9 333 80-433 9-395 (403)
8 1am5_A Pepsin, acid proteinase 100.0 2E-59 6.9E-64 453.7 26.0 302 81-431 2-324 (324)
9 1qdm_A Prophytepsin; aspartic 100.0 7.7E-59 2.6E-63 469.3 30.7 317 80-431 41-478 (478)
10 1mpp_A Pepsin; hydrolase(acid 100.0 4.7E-59 1.6E-63 457.8 28.1 310 80-433 7-357 (361)
11 4aa9_A Chymosin; hydrolase, as 100.0 2.1E-59 7.2E-64 453.0 24.8 298 83-431 3-320 (320)
12 1htr_B Gastricsin; aspartyl pr 100.0 9.6E-59 3.3E-63 449.9 24.8 304 82-431 4-329 (329)
13 3fv3_A SAPP1P-secreted asparti 100.0 2.3E-58 7.7E-63 449.3 27.2 297 81-433 3-331 (339)
14 2apr_A Rhizopuspepsin; hydrola 100.0 3E-58 1E-62 445.3 27.7 291 94-431 14-324 (325)
15 3k1w_A Renin; protease, altern 100.0 1.1E-58 3.6E-63 452.1 22.8 309 80-431 7-340 (341)
16 1j71_A Candidapepsin, aspartic 100.0 1.9E-58 6.6E-63 448.5 24.2 294 81-433 3-326 (334)
17 2qzx_A Candidapepsin-5; aspart 100.0 1.9E-58 6.7E-63 450.1 24.2 298 81-433 3-333 (342)
18 3c9x_A Trichoderma reesei aspa 100.0 7.6E-58 2.6E-62 443.3 27.2 294 93-430 13-329 (329)
19 1oew_A Endothiapepsin; hydrola 100.0 1.1E-57 3.8E-62 442.2 25.9 293 94-430 14-329 (329)
20 3pvk_A Candidapepsin-2; hydrol 100.0 6.3E-58 2.2E-62 446.7 23.7 296 81-433 3-333 (342)
21 1miq_A Plasmepsin; aspartic pr 100.0 7.3E-58 2.5E-62 450.3 23.0 300 81-431 52-374 (375)
22 2bju_A Plasmepsin II; aspartic 100.0 1.2E-57 4.1E-62 455.9 24.3 299 81-431 128-450 (453)
23 1yg9_A Aspartic protease BLA G 100.0 1.3E-56 4.3E-61 434.8 24.8 299 81-431 7-329 (330)
24 2ewy_A Beta-secretase 2; BACE2 100.0 7.7E-56 2.6E-60 438.4 28.7 305 94-433 12-357 (383)
25 3qvc_A Histo-aspartic protease 100.0 2.2E-56 7.6E-61 447.4 25.1 301 80-431 126-449 (451)
26 3lpj_A Beta-secretase 1; alzhe 100.0 7.3E-56 2.5E-60 447.5 27.0 307 94-433 73-422 (455)
27 3vf3_A Beta-secretase 1; struc 100.0 9.4E-56 3.2E-60 440.5 26.7 307 94-433 27-376 (402)
28 2qp8_A Beta-secretase 1; BACE1 100.0 2.2E-55 7.4E-60 436.7 28.6 305 94-433 20-369 (395)
29 1ibq_A Aspergillopepsin; aspar 100.0 2.7E-55 9.3E-60 424.7 28.1 291 93-431 12-325 (325)
30 1wkr_A Polyporopepsin; hydrola 100.0 2.8E-55 9.6E-60 427.4 27.9 302 81-433 3-335 (340)
31 1bxo_A Protein (penicillopepsi 100.0 1.8E-55 6.2E-60 425.5 24.8 288 94-431 14-323 (323)
32 1izd_A Aspartic proteinase; su 100.0 2.8E-55 9.6E-60 424.1 25.7 288 94-431 14-323 (323)
33 1t6e_X Xylanase inhibitor; two 100.0 5.3E-54 1.8E-58 424.5 28.1 319 81-431 3-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 3.2E-44 1.1E-48 331.7 18.3 218 82-333 4-236 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 9.2E-39 3.2E-43 295.9 19.4 222 190-431 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 4.2E-24 1.4E-28 167.3 8.5 89 81-191 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 2.1E-18 7.1E-23 132.6 7.8 81 350-431 5-87 (87)
38 2i1a_A DNA damage-inducible pr 95.2 0.021 7.2E-07 47.3 5.1 89 94-219 24-115 (148)
39 3s8i_A Protein DDI1 homolog 1; 94.4 0.047 1.6E-06 45.2 5.1 27 403-429 108-134 (148)
40 2i1a_A DNA damage-inducible pr 94.2 0.11 3.9E-06 42.7 7.0 26 403-428 109-134 (148)
41 3s8i_A Protein DDI1 homolog 1; 92.0 0.22 7.6E-06 41.1 5.4 90 94-219 22-114 (148)
42 2hs1_A HIV-1 protease; ultra-h 88.7 0.53 1.8E-05 35.7 4.5 28 98-127 10-37 (99)
43 1fmb_A EIAV protease; hydrolas 87.8 0.53 1.8E-05 36.2 4.0 26 97-124 9-34 (104)
44 3ec0_A Protease; HIV-2, inhibi 86.6 0.84 2.9E-05 34.6 4.5 28 98-127 10-37 (99)
45 3liy_A Protease; hydrolase, hy 82.8 1.1 3.7E-05 34.7 3.6 31 98-128 12-45 (116)
46 2hah_A Protease, retropepsin; 80.1 1.6 5.5E-05 34.1 3.8 26 98-126 16-41 (116)
47 3sqf_A Protease; folded monome 76.9 2.6 8.8E-05 32.7 4.0 28 98-127 11-38 (114)
48 3slz_A GAG-Pro-POL polyprotein 72.0 4.6 0.00016 32.3 4.5 29 96-126 22-50 (132)
49 2rsp_A RSV protease; hydrolase 66.2 6.3 0.00022 31.1 4.1 23 103-127 27-49 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 64.1 5.9 0.0002 34.1 3.9 28 97-126 9-36 (203)
51 1lya_A Cathepsin D; lysosomal 53.7 12 0.00042 27.9 3.7 16 309-324 29-44 (97)
52 1bxo_A Protein (penicillopepsi 44.9 20 0.00069 33.1 4.5 42 263-326 5-46 (323)
53 1ibq_A Aspergillopepsin; aspar 43.9 22 0.00076 32.8 4.7 42 263-326 4-45 (325)
54 3ka2_A [L-Ala51;Gly51']HIV-1 p 43.8 26 0.0009 30.0 4.6 28 97-126 113-140 (203)
55 1izd_A Aspartic proteinase; su 42.5 23 0.00079 32.7 4.5 42 263-326 5-46 (323)
56 3c9x_A Trichoderma reesei aspa 39.1 31 0.001 31.9 4.8 33 94-126 192-230 (329)
57 1mpp_A Pepsin; hydrolase(acid 37.5 34 0.0012 32.0 4.9 43 262-324 5-49 (361)
58 3cms_A Chymosin B; hydrolase, 35.8 34 0.0012 31.4 4.5 16 309-324 30-45 (323)
59 2apr_A Rhizopuspepsin; hydrola 32.3 38 0.0013 31.2 4.2 32 95-126 193-229 (325)
60 1oew_A Endothiapepsin; hydrola 31.3 48 0.0016 30.5 4.8 16 309-324 31-46 (329)
61 1fmb_A EIAV protease; hydrolas 28.6 40 0.0014 25.5 3.0 35 279-328 6-40 (104)
62 2hs1_A HIV-1 protease; ultra-h 28.4 38 0.0013 25.4 2.7 30 279-323 6-35 (99)
63 1b5f_A Protein (cardosin A); h 28.4 54 0.0019 28.6 4.3 31 95-125 188-226 (239)
64 1j71_A Candidapepsin, aspartic 27.8 50 0.0017 30.4 4.2 16 309-324 28-43 (334)
65 3fv3_A SAPP1P-secreted asparti 27.2 52 0.0018 30.3 4.2 16 309-324 28-43 (339)
66 1wkr_A Polyporopepsin; hydrola 26.0 55 0.0019 30.2 4.2 15 309-323 28-42 (340)
67 2qzx_A Candidapepsin-5; aspart 25.7 58 0.002 30.1 4.2 16 309-324 28-43 (342)
68 2hah_A Protease, retropepsin; 25.0 52 0.0018 25.4 3.0 31 277-323 10-40 (116)
69 3ec0_A Protease; HIV-2, inhibi 25.0 44 0.0015 25.0 2.6 30 278-322 5-34 (99)
70 1lya_B Cathepsin D; lysosomal 24.7 61 0.0021 28.1 4.0 32 95-126 99-137 (241)
71 1yg9_A Aspartic protease BLA G 24.6 53 0.0018 30.3 3.7 30 277-324 17-46 (330)
72 3slz_A GAG-Pro-POL polyprotein 24.5 60 0.002 25.7 3.4 25 284-323 25-49 (132)
73 3pvk_A Candidapepsin-2; hydrol 22.8 71 0.0024 29.4 4.2 17 308-324 27-43 (342)
74 4aa9_A Chymosin; hydrolase, as 21.8 80 0.0027 28.7 4.4 17 308-324 26-42 (320)
75 3psg_A Pepsinogen; hydrolase(a 21.5 80 0.0027 29.6 4.3 43 264-324 45-87 (370)
76 2x0b_A Renin; hydrolase-hormon 21.4 91 0.0031 29.5 4.7 32 95-126 242-280 (383)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=3.8e-62 Score=485.84 Aligned_cols=334 Identities=23% Similarity=0.444 Sum_probs=279.8
Q ss_pred cceeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCCCCCCCCCccccccCCCcccCCCC
Q 039412 79 RKSVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVP 158 (433)
Q Consensus 79 ~~~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~y~~~~Sst~~~~~c~~~~C~~~~ 158 (433)
..+.+|++.+ ..+++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.++|.++.|....
T Consensus 7 ~~~~~pv~~d---~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c----------~~Sst~~~v~C~s~~C~~~~ 73 (413)
T 3vla_A 7 SALVVPVKKD---ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN----------YVSSTYRPVRCRTSQCSLSG 73 (413)
T ss_dssp SEEEEEEEEC---TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS----------CCCTTCEECBTTSHHHHHTT
T ss_pred ccEEEEeeec---CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC----------CCCCCcCccCCCcccccccc
Confidence 3477899865 3588999999999999999999999999999999875 47999999999999997654
Q ss_pred C-----------CCCCCCCceeEEecC-C-CceEEeEEEEEEEecC---------cccCceEEEeeecc--CCCCCCCCe
Q 039412 159 N-----------PTCGGGACAFNLTYG-S-STIAANLSQDTISLAT---------DIVPGYTFGCIQKA--TGNSVPPQG 214 (433)
Q Consensus 159 ~-----------~~C~~~~~~~~~~Y~-~-g~~~G~~~~D~v~ig~---------~~~~~~~fg~~~~~--~~~~~~~~G 214 (433)
. ..|.++.|.|.+.|+ + +.+.|++++|+|+|++ ..++++.|||++.+ .+.+..++|
T Consensus 74 ~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dG 153 (413)
T 3vla_A 74 SIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVG 153 (413)
T ss_dssp CCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCE
T ss_pred cCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccccccc
Confidence 2 245666799999995 6 6778999999999972 57889999999986 345668999
Q ss_pred EeecCCCCCchhhhh---ccccCCceEEecCCCCCCCCcceEEecCCCC--------CCC-eeeeeCccCCCC-------
Q 039412 215 LLGLGRGSLSLLAQT---QNLYQSTFSYCLPSFKALSFSGSLRLGPIGQ--------PKR-IKYTPLLKNPRR------- 275 (433)
Q Consensus 215 ilGLg~~~~s~~~q~---~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d~--------~~~-l~~~p~~~~~~~------- 275 (433)
|||||++.+|++.|+ +.+ +++||+||.+. ....|+|+||++|. .++ ++|+||+.++..
T Consensus 154 IlGLg~~~lSl~sql~~~~~i-~~~FS~cL~~~--~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~ 230 (413)
T 3vla_A 154 MAGLGRTRIALPSQFASAFSF-KRKFAMCLSGS--TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQ 230 (413)
T ss_dssp EEECSSSSSSHHHHHHHHHTC-CSEEEEECCSC--SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCT
T ss_pred ccccCCCCcchHHHHhhhcCC-CceEEEeCCCC--CCCceEEEECCCcccccccccccCCceeEeecccCCccccccccc
Confidence 999999999999885 345 79999999983 35679999999872 467 999999986532
Q ss_pred ---CcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhc--CCccccCCCCcc
Q 039412 276 ---SSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVG--SNLTVTSLGGFD 350 (433)
Q Consensus 276 ---~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~--~~~~~~~~~~~~ 350 (433)
..+|.|+|++|+||++.+.++++.+.++.++++.+||||||++++||+++|++|+++|.+++. ..+.......+.
T Consensus 231 ~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~ 310 (413)
T 3vla_A 231 GEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFG 310 (413)
T ss_dssp TCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCS
T ss_pred cCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCc
Confidence 279999999999999999988888877666678999999999999999999999999998875 222222334468
Q ss_pred CCCCCC--------CCCceEEEEEeC--cEEEeCCCCeEEEecCCCeEEEEEEecCCCCCCceeEechhhhceeEEEEEC
Q 039412 351 TCYSVP--------IVAPTITLMFSG--MNVTLPQDNLLIHSTAGSITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDV 420 (433)
Q Consensus 351 ~C~~~~--------~~~P~i~f~f~g--~~~~l~~~~y~~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~ 420 (433)
.|++.. ..+|+|+|+|+| ++|+|++++|+++..+ +..|++++..... .++.||||+.|||++|+|||+
T Consensus 311 ~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~-~~~Cl~~~~~~~~-~~~~~IlGd~fl~~~~vvfD~ 388 (413)
T 3vla_A 311 ACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND-NVVCLGVVDGGSN-LRTSIVIGGHQLEDNLVQFDL 388 (413)
T ss_dssp CEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET-TEEEECEEEEESS-CSSSEEECHHHHTTEEEEEET
T ss_pred ceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC-CcEEEEEEecCCC-cccceeEehhhhcCeEEEEEC
Confidence 999863 278999999998 7999999999998765 5789988775432 124799999999999999999
Q ss_pred CCCEEEEecC
Q 039412 421 PNSRLGVARE 430 (433)
Q Consensus 421 ~~~riGfa~~ 430 (433)
+++|||||++
T Consensus 389 ~~~riGfa~~ 398 (413)
T 3vla_A 389 ATSRVGFSGT 398 (413)
T ss_dssp TTTEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999999985
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.6e-61 Score=472.20 Aligned_cols=304 Identities=23% Similarity=0.376 Sum_probs=256.4
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC--CCCCCC-CCCCCCCccccccCCCcccCCC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV--GCSSTV-FNSAQSTTFKNLGCQAAQCKQV 157 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~--~C~~~~-y~~~~Sst~~~~~c~~~~C~~~ 157 (433)
...||.+ +.+.+|+++|+||||||+++|+|||||+++||+|..|. .|..|+ |||++|+||+..
T Consensus 46 ~~~~l~n----~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~---------- 111 (370)
T 3psg_A 46 GDEPLEN----YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEAT---------- 111 (370)
T ss_dssp CCCTTGG----GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEE----------
T ss_pred ceeccee----ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEEC----------
Confidence 4567764 34789999999999999999999999999999999998 478887 999999999997
Q ss_pred CCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC---CCCCCeEeecCCCCCch---------
Q 039412 158 PNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN---SVPPQGLLGLGRGSLSL--------- 225 (433)
Q Consensus 158 ~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~---~~~~~GilGLg~~~~s~--------- 225 (433)
+|.|.+.|++|++.|.+++|+|+|++..++++.|||++...+. ...++||||||++.++.
T Consensus 112 --------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~ 183 (370)
T 3psg_A 112 --------SQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDN 183 (370)
T ss_dssp --------EEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred --------CcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHHH
Confidence 7899999999999999999999999999999999999988663 34789999999987764
Q ss_pred hhhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCccc
Q 039412 226 LAQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQF 302 (433)
Q Consensus 226 ~~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 302 (433)
+.+++.|.+++||+||.+. ....|+|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+...
T Consensus 184 l~~qg~i~~~~FS~~L~~~--~~~~G~l~fGg~D~~~y~g~l~~~pv~~----~~~w~v~l~~i~v~g~~~~~~------ 251 (370)
T 3psg_A 184 LWDQGLVSQDLFSVYLSSN--DDSGSVVLLGGIDSSYYTGSLNWVPVSV----EGYWQITLDSITMDGETIACS------ 251 (370)
T ss_dssp HHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSE----ETTEEEEECEEESSSSEEECT------
T ss_pred HHHCCCCCCCEEEEEEccC--CCCCeEEEEEeeChHhcCCcceeecccc----cceeEEEEeEEEECCEEEecC------
Confidence 2345889999999999984 3458999999999 679999999987 589999999999999877532
Q ss_pred CCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEE
Q 039412 303 NPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIH 381 (433)
Q Consensus 303 ~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~ 381 (433)
++..+||||||+++++|++++++|.+++. +. ....+.| ++|+.. ..+|+|+|+|+|++++|++++|+++
T Consensus 252 ---~~~~aiiDTGTs~~~lP~~~~~~i~~~i~----a~--~~~~g~~~v~C~~~-~~lP~i~f~~~g~~~~l~~~~yi~~ 321 (370)
T 3psg_A 252 ---GGCQAIVDTGTSLLTGPTSAIANIQSDIG----AS--ENSDGEMVISCSSI-DSLPDIVFTIDGVQYPLSPSAYILQ 321 (370)
T ss_dssp ---TCEEEEECTTCCSEEEEHHHHHHHHHHTT----CE--ECTTCCEECCGGGG-GGCCCEEEEETTEEEEECHHHHEEE
T ss_pred ---CCceEEEcCCCCcEECCHHHHHHHHHHhC----Cc--ccCCCcEEEECCCc-ccCCcEEEEECCEEEEECHHHhccc
Confidence 35789999999999999999999877653 32 1233445 999987 7899999999999999999999998
Q ss_pred ecCCCeEEEE-EEecCCCC-CCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 382 STAGSITCLA-MAAAPDNV-NSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 382 ~~~~~~~C~~-~~~~~~~~-~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
. +..|+. ++...... .++.||||++|||++|+|||++++|||||+++
T Consensus 322 -~--~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 322 -D--DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp -C--SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -C--CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 2 346985 66643211 12469999999999999999999999999974
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.3e-61 Score=476.92 Aligned_cols=307 Identities=20% Similarity=0.336 Sum_probs=259.0
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC----CCCCCC-CCCCCCCccccccCCCcccC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV----GCSSTV-FNSAQSTTFKNLGCQAAQCK 155 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~----~C~~~~-y~~~~Sst~~~~~c~~~~C~ 155 (433)
..+||.+ +.+.+|+++|+||||||+|+|+|||||+++||+|..|. .|..|+ |||++|+||+..
T Consensus 51 ~~~~l~n----~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~-------- 118 (383)
T 2x0b_A 51 SSVILTN----YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHN-------- 118 (383)
T ss_dssp CEEEEEE----ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEE--------
T ss_pred ceEeeee----cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEEC--------
Confidence 4578874 24789999999999999999999999999999999996 698787 999999999987
Q ss_pred CCCCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC---CCCCCeEeecCCCCCchh------
Q 039412 156 QVPNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN---SVPPQGLLGLGRGSLSLL------ 226 (433)
Q Consensus 156 ~~~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~---~~~~~GilGLg~~~~s~~------ 226 (433)
+|.|.+.|++|++.|.+++|+|+|++..++ +.|||++.+.+. ...++||||||++.++..
T Consensus 119 ----------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~ 187 (383)
T 2x0b_A 119 ----------GTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIF 187 (383)
T ss_dssp ----------EEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHH
T ss_pred ----------CcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHH
Confidence 799999999999999999999999999999 999999987652 357899999999887642
Q ss_pred ---hhhccccCCceEEecCCCCCC--CCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCC
Q 039412 227 ---AQTQNLYQSTFSYCLPSFKAL--SFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPG 298 (433)
Q Consensus 227 ---~q~~~i~~~~Fs~~l~~~~~~--~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~ 298 (433)
.+++.+.+++||+||.+.... ...|+|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+..
T Consensus 188 ~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~----~~~w~v~l~~i~v~~~~~~~--- 260 (383)
T 2x0b_A 188 DNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVGSSTLLC--- 260 (383)
T ss_dssp HHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS----TTSCEEEECEEEESSCCCBS---
T ss_pred HHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC----CceEEEEEeEEEeCCceEEc---
Confidence 345889999999999885221 137999999999 569999999987 58999999999999976432
Q ss_pred CcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCC
Q 039412 299 ALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDN 377 (433)
Q Consensus 299 ~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~ 377 (433)
..+..+||||||+++++|++++++|.+++.+ .+ ..+.+ ++|+.. ..+|+|+|+|+|++|+|++++
T Consensus 261 ------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a----~~---~~g~~~v~C~~~-~~~P~i~f~~~g~~~~l~~~~ 326 (383)
T 2x0b_A 261 ------EDGCLALVDTGASYISGSTSSIEKLMEALGA----KK---RLFDYVVKCNEG-PTLPDISFHLGGKEYTLTSAD 326 (383)
T ss_dssp ------TTCEEEEECTTCSSEEECHHHHHHHHHHHTC----EE---CSSCEEEEGGGT-TTCCCEEEEETTEEEEECHHH
T ss_pred ------CCCcEEEEcCCCceEEcCHHHHHHHHHHhCC----cc---cCCcEEEecccc-ccCceEEEEECCEEEEECHHH
Confidence 2357899999999999999999998777643 21 23344 899987 789999999999999999999
Q ss_pred eEEEecC-CCeEEEE-EEecCCC-CCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 378 LLIHSTA-GSITCLA-MAAAPDN-VNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 378 y~~~~~~-~~~~C~~-~~~~~~~-~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
|+++... ++..|+. |+..+.. ..++.||||++|||++|+|||++++|||||+++
T Consensus 327 yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 327 YVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp HBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 9987653 2468984 7765321 122579999999999999999999999999874
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.2e-60 Score=462.56 Aligned_cols=310 Identities=22% Similarity=0.373 Sum_probs=257.6
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC--CCCCCC-CCCCCCCccccccCCCcccCCC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV--GCSSTV-FNSAQSTTFKNLGCQAAQCKQV 157 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~--~C~~~~-y~~~~Sst~~~~~c~~~~C~~~ 157 (433)
..+||.+. .+..|+++|.||||+|+++|+|||||+++||+|..|. .|..++ |||++|+||+..
T Consensus 13 ~~~~l~n~----~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------- 78 (351)
T 1tzs_A 13 AKEPLINY----LDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQP---------- 78 (351)
T ss_dssp -CCTTGGG----SSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCC----------
T ss_pred cceeceec----CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEEC----------
Confidence 45777642 3789999999999999999999999999999999998 798888 999999999987
Q ss_pred CCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC---CCCCCeEeecCCCCCchh--------
Q 039412 158 PNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN---SVPPQGLLGLGRGSLSLL-------- 226 (433)
Q Consensus 158 ~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~---~~~~~GilGLg~~~~s~~-------- 226 (433)
+|.|.+.|++|++.|.+++|+|+|++.+++++.|||++...+. ....+||||||++.++..
T Consensus 79 --------~~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 150 (351)
T 1tzs_A 79 --------GQSFSIQYGTGSLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDN 150 (351)
T ss_dssp --------SCEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHH
T ss_pred --------CCEEEEEeCCCCeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHH
Confidence 7999999999989999999999999999999999999987653 247899999999877642
Q ss_pred -hhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCccc
Q 039412 227 -AQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQF 302 (433)
Q Consensus 227 -~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 302 (433)
.+++.|.+++||+||.+.......|.|+|||+| +.|++.|+|+.. ..+|.|.+++|+|+++.+...
T Consensus 151 l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~------ 220 (351)
T 1tzs_A 151 MMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTK----QAYWQIALDNIQVGGTVMFCS------ 220 (351)
T ss_dssp HHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSE----ETTEEEEEEEEEETTEEEECT------
T ss_pred HHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCC----CceEEEEeCEEEECCceEEcC------
Confidence 345788999999999885322347999999999 679999999987 579999999999999886422
Q ss_pred CCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEE
Q 039412 303 NPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIH 381 (433)
Q Consensus 303 ~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~ 381 (433)
.+..+||||||++++||++++++|.+++.+ .. . . +.| ++|+.. ..+|+|+|+|+|++++|++++|+++
T Consensus 221 ---~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~----~~-~-~-g~~~~~C~~~-~~~P~i~f~f~g~~~~i~~~~yi~~ 289 (351)
T 1tzs_A 221 ---EGCQAIVDTGTSLITGPSDKIKQLQNAIGA----AP-V-D-GEYAVECANL-NVMPDVTFTINGVPYTLSPTAYTLL 289 (351)
T ss_dssp ---TCEEEEECTTCSSEEECHHHHHHHHHHHTC----EE-C-S-SSEEECGGGG-GGSCCEEEEETTEEEEECTTTSEEC
T ss_pred ---CCceEEeccCCcceeCCHHHHHHHHHHhCC----cc-c-C-CeEEEeCCCC-ccCCcEEEEECCEEEEECHHHhEee
Confidence 356899999999999999999998877633 21 1 2 445 899987 6789999999999999999999987
Q ss_pred ecC-CCeEEEE-EEecCCC-CCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 382 STA-GSITCLA-MAAAPDN-VNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 382 ~~~-~~~~C~~-~~~~~~~-~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
... ++..|+. |+..... ...+.||||+.|||++|+|||++++|||||+++|.
T Consensus 290 ~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 290 DFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW 344 (351)
T ss_dssp C-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--
T ss_pred ccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc
Confidence 543 2358985 7765311 11257999999999999999999999999999984
No 5
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.1e-59 Score=454.46 Aligned_cols=305 Identities=21% Similarity=0.395 Sum_probs=257.9
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCC--CCCCC-CCCCCCCccccccCCCcccCCC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVG--CSSTV-FNSAQSTTFKNLGCQAAQCKQV 157 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~--C~~~~-y~~~~Sst~~~~~c~~~~C~~~ 157 (433)
..+|+.+. .+.+|+++|.||||+|+++|+|||||+++||+|..|.. |..++ |||++|+||+..
T Consensus 3 ~~~~l~~~----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------- 68 (329)
T 1dpj_A 3 HDVPLTNY----LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKAN---------- 68 (329)
T ss_dssp EEEECEEE----TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEE----------
T ss_pred cceeeeec----CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEEC----------
Confidence 35677642 37899999999999999999999999999999999986 87777 999999999986
Q ss_pred CCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC---CCCCCeEeecCCCCCchh--------
Q 039412 158 PNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN---SVPPQGLLGLGRGSLSLL-------- 226 (433)
Q Consensus 158 ~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~---~~~~~GilGLg~~~~s~~-------- 226 (433)
+|.|.+.|++|++.|.+++|+|+|++.+++++.|||++...+. ....+||||||++..+..
T Consensus 69 --------~~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 140 (329)
T 1dpj_A 69 --------GTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYN 140 (329)
T ss_dssp --------EEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred --------CcEEEEEECCceEEEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHH
Confidence 7999999999989999999999999999999999999987651 347899999999887643
Q ss_pred -hhhccccCCceEEecCCCCC-CCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcc
Q 039412 227 -AQTQNLYQSTFSYCLPSFKA-LSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQ 301 (433)
Q Consensus 227 -~q~~~i~~~~Fs~~l~~~~~-~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 301 (433)
.+++.|.+++||+||.+... ....|.|+|||+| +.|++.|+|+.. ..+|.|.+++|+|+++.+..
T Consensus 141 l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~------ 210 (329)
T 1dpj_A 141 AIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR----KAYWEVKFEGIGLGDEYAEL------ 210 (329)
T ss_dssp HHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEEC------
T ss_pred HHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC----CceEEEEeeeEEECCeEecC------
Confidence 23577889999999987421 2347999999999 568999999986 57999999999999988753
Q ss_pred cCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEE
Q 039412 302 FNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLI 380 (433)
Q Consensus 302 ~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~ 380 (433)
.+..+||||||++++||++++++|.+++.+. ....+.| ++|+.. ..+|+|+|+|+|.+++|++++|++
T Consensus 211 ----~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~------~~~~g~~~~~C~~~-~~~P~i~f~f~g~~~~i~~~~y~~ 279 (329)
T 1dpj_A 211 ----ESHGAAIDTGTSLITLPSGLAEMINAEIGAK------KGWTGQYTLDCNTR-DNLPDLIFNFNGYNFTIGPYDYTL 279 (329)
T ss_dssp ----SSCEEEECTTCSCEEECHHHHHHHHHHHTCE------ECTTSSEEECGGGG-GGCCCEEEEETTEEEEECTTTSEE
T ss_pred ----CCccEEeeCCCCcEECCHHHHHHHHHHhCCc------cCCCCeEEEECCCC-CcCCcEEEEECCEEEEECHHHhEe
Confidence 2468999999999999999999988776432 2233445 799987 689999999999999999999999
Q ss_pred EecCCCeEEEE-EEecCCC-CCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 381 HSTAGSITCLA-MAAAPDN-VNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 381 ~~~~~~~~C~~-~~~~~~~-~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
+.. ..|+. |+..... ..++.||||+.|||++|+|||++++|||||+++
T Consensus 280 ~~~---~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 280 EVS---GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EET---TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCC---CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 864 38984 7664311 112579999999999999999999999999875
No 6
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5.6e-60 Score=457.28 Aligned_cols=300 Identities=20% Similarity=0.350 Sum_probs=254.7
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCC--CCCCCCC-CCCCCCCccccccCCCcccCCC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGC--VGCSSTV-FNSAQSTTFKNLGCQAAQCKQV 157 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C--~~C~~~~-y~~~~Sst~~~~~c~~~~C~~~ 157 (433)
..+||.+. .+.+|+++|.||||+|+++|+|||||+++||+|..| ..|..++ |||++|+||+..
T Consensus 4 ~~~~l~n~----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------- 69 (323)
T 3cms_A 4 ASVPLTNY----LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNL---------- 69 (323)
T ss_dssp EEEEEEEE----TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEE----------
T ss_pred ceeeeEec----cCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEEC----------
Confidence 34677642 478999999999999999999999999999999999 4797787 999999999987
Q ss_pred CCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC-C--CCCCeEeecCCCCCchh--------
Q 039412 158 PNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN-S--VPPQGLLGLGRGSLSLL-------- 226 (433)
Q Consensus 158 ~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~-~--~~~~GilGLg~~~~s~~-------- 226 (433)
+|.|.+.|++|++.|.+++|+|+|++.+++++.|||++...+. + ...+||||||++..+..
T Consensus 70 --------~~~~~i~Yg~Gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 141 (323)
T 3cms_A 70 --------GKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDN 141 (323)
T ss_dssp --------EEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHH
T ss_pred --------CcEEEEEeCCCCeEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHH
Confidence 7899999999889999999999999999999999999987652 2 47899999999876542
Q ss_pred -hhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCccc
Q 039412 227 -AQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQF 302 (433)
Q Consensus 227 -~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 302 (433)
.+++.|.+++||+||.+.. ..|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+.++
T Consensus 142 l~~q~~i~~~~FS~~l~~~~---~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~------ 208 (323)
T 3cms_A 142 MMNRHLVAQDLFSVYMDRNG---QESMLTLGAIDPSYYTGSLHWVPVTV----QQYWQFTVDSVTISGVVVACE------ 208 (323)
T ss_dssp HHHTTCSSSSEEEEECCTTS---SCEEEEESCCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEEST------
T ss_pred HHHCCCCCCCEEEEEECCCC---CCEEEEECCCChhhccCceEEEECcc----CCeEEEEEeeEEECCEEeecC------
Confidence 3457788999999998842 23999999999 568999999987 579999999999999887643
Q ss_pred CCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEE
Q 039412 303 NPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIH 381 (433)
Q Consensus 303 ~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~ 381 (433)
.+..+||||||+++++|++++++|.+++.+ . ....+.+ ++|+.. ..+|+|+|+|+|++++|++++|+++
T Consensus 209 ---~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~----~--~~~~g~~~~~C~~~-~~~P~i~f~f~g~~~~i~~~~y~~~ 278 (323)
T 3cms_A 209 ---GGCQAILDTGTSKLVGPSSDILNIQQAIGA----T--QNQYGEFDIDCDNL-SYMPTVVFEINGKMYPLTPSAYTSQ 278 (323)
T ss_dssp ---TCEEEEECTTCCSEEECHHHHHHHHHHHTC----E--EETTTEEEECTTCT-TTSCCEEEEETTEEEEECHHHHEEE
T ss_pred ---CCcEEEEecCCccEeCCHHHHHHHHHHhCC----e--ecCCCcEEEECCCC-ccCceEEEEECCEEEEECHHHhccC
Confidence 346899999999999999999998877643 2 1122344 899987 7899999999999999999999998
Q ss_pred ecCCCeEEEE-EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 382 STAGSITCLA-MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 382 ~~~~~~~C~~-~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
. +..|+. ++..... +.||||+.|||++|+|||++++|||||+++
T Consensus 279 ~---~~~C~~~i~~~~~~---~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 279 D---QGFCTSGFQSENHS---QKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp E---TTEEEESEEEC------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C---CCEEEEEEEeCCCC---CcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 2 458985 7765422 479999999999999999999999999875
No 7
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=6.9e-59 Score=462.73 Aligned_cols=333 Identities=22% Similarity=0.381 Sum_probs=265.2
Q ss_pred ceeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCCCCCCCCCccccccCCCcccCCCCC
Q 039412 80 KSVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVPN 159 (433)
Q Consensus 80 ~~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~y~~~~Sst~~~~~c~~~~C~~~~~ 159 (433)
.+.+||..+ +.+.+|+++|.||||+|++.|+|||||+++||+|..| .+|+||+.++|.++.|.....
T Consensus 9 ~~~~pl~~~---~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~----------~~Sst~~~~~C~s~~C~~~~~ 75 (403)
T 3aup_A 9 LVVLPVQND---GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ----------YSSKTYQAPFCHSTQCSRANT 75 (403)
T ss_dssp CEEEEEEEC---TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC----------CCCSSCBCCCTTBHHHHHTTC
T ss_pred cEEEeeecC---CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC----------CCCCCCCccCCCCccccCccc
Confidence 366888832 2478999999999999999999999999999998874 579999999999998975532
Q ss_pred -----------CCCCCCCceeEEecC-C-CceEEeEEEEEEEecC-----------cccCceEEEeeeccC---CCCCCC
Q 039412 160 -----------PTCGGGACAFNLTYG-S-STIAANLSQDTISLAT-----------DIVPGYTFGCIQKAT---GNSVPP 212 (433)
Q Consensus 160 -----------~~C~~~~~~~~~~Y~-~-g~~~G~~~~D~v~ig~-----------~~~~~~~fg~~~~~~---~~~~~~ 212 (433)
..|.++.|.|.+.|+ + +.+.|.+++|+|+|++ ..++++.|||++... +.....
T Consensus 76 ~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~ 155 (403)
T 3aup_A 76 HQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT 155 (403)
T ss_dssp CCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTC
T ss_pred cCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCC
Confidence 245556899999998 5 6788999999999987 788999999999864 334578
Q ss_pred CeEeecCCCCCchhhhh--ccccCCceEEecCCCCCCCCcceEEecCCC---C--C-C-----CeeeeeCccCCCCCcce
Q 039412 213 QGLLGLGRGSLSLLAQT--QNLYQSTFSYCLPSFKALSFSGSLRLGPIG---Q--P-K-----RIKYTPLLKNPRRSSLY 279 (433)
Q Consensus 213 ~GilGLg~~~~s~~~q~--~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~--~-~-----~l~~~p~~~~~~~~~~w 279 (433)
+||||||++.++++.|+ +.+.+++||+||.+. ....|.|+||| | + . | ++.|+|++.++ ..+|
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~--~~~y 230 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY--PTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL--QGEY 230 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSC--TTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT--TSCE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCC--CCCCeeEEECC-CchhccccccccccCceeecccccCC--CCcc
Confidence 99999999999998875 447789999999873 34689999999 7 4 3 5 99999999854 3699
Q ss_pred EEEeeEEEECCEEe-ecCCCCcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccC--CCCc-cCCCCC
Q 039412 280 YVNLLAIRVGRRVV-DIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTS--LGGF-DTCYSV 355 (433)
Q Consensus 280 ~v~l~~i~v~~~~~-~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~--~~~~-~~C~~~ 355 (433)
.|+|++|+|+++.+ .+++..+.++..+...+||||||++++||+++|++|+++|.++++....... ...+ ++|...
T Consensus 231 ~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~ 310 (403)
T 3aup_A 231 NVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKI 310 (403)
T ss_dssp EECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGC
T ss_pred eEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCc
Confidence 99999999999998 7776666555556678999999999999999999999999877654322111 1223 677765
Q ss_pred CCCCceEEEEEeCc---EEEeCCCCeEEEecCCCeEEEEEEecCCCCCCceeEechhhhceeEEEEECCCCEEEE-----
Q 039412 356 PIVAPTITLMFSGM---NVTLPQDNLLIHSTAGSITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGV----- 427 (433)
Q Consensus 356 ~~~~P~i~f~f~g~---~~~l~~~~y~~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGf----- 427 (433)
..+|+|+|+|+|. +++|++++|+++..+ +..|++|+..... ..+.||||+.|||++|+|||++++||||
T Consensus 311 -~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~-~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~ 387 (403)
T 3aup_A 311 -NAYPSVDLVMDKPNGPVWRISGEDLMVQAQP-GVTCLGVMNGGMQ-PRAEITLGARQLEENLVVFDLARSRVGFSTSSL 387 (403)
T ss_dssp -CCCCCEEEEESSTTCCEEEECHHHHEEEC----CEEECEEECCSC-CSSSEEECHHHHTTSCEEEETTTTEEEEESSCG
T ss_pred -CcCCcEEEEEcCCCceEEEEcccceEEEcCC-CeEEEEEEcCCCC-CCCcEEEChHHhcCeEEEEECCCCEEEEecccc
Confidence 5799999999985 999999999997653 5689988876532 1247999999999999999999999999
Q ss_pred --ecCCCC
Q 039412 428 --ARELCT 433 (433)
Q Consensus 428 --a~~~C~ 433 (433)
++++|+
T Consensus 388 ~~~~~~C~ 395 (403)
T 3aup_A 388 HSHGVKCA 395 (403)
T ss_dssp GGGTCCGG
T ss_pred cccCCCcc
Confidence 777774
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2e-59 Score=453.66 Aligned_cols=302 Identities=23% Similarity=0.369 Sum_probs=257.4
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC--CCCCCC-CCCCCCCccccccCCCcccCCC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV--GCSSTV-FNSAQSTTFKNLGCQAAQCKQV 157 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~--~C~~~~-y~~~~Sst~~~~~c~~~~C~~~ 157 (433)
+.+||.+. .+..|+++|.||||+|+++|+|||||+++||+|..|. .|..++ |||++|+|++..
T Consensus 2 ~~~~l~n~----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------- 67 (324)
T 1am5_A 2 VTEQMKNE----ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVET---------- 67 (324)
T ss_dssp EEEEEEEE----TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEE----------
T ss_pred ceeeeecC----CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeC----------
Confidence 45677742 4789999999999999999999999999999999998 587787 999999999987
Q ss_pred CCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC-C--CCCCeEeecCCCCCchh--------
Q 039412 158 PNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN-S--VPPQGLLGLGRGSLSLL-------- 226 (433)
Q Consensus 158 ~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~-~--~~~~GilGLg~~~~s~~-------- 226 (433)
+|.|.+.|++|++.|.+++|+|++++.+++++.|||++...+. + ...+||||||++..+..
T Consensus 68 --------~~~~~i~Yg~Gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 139 (324)
T 1am5_A 68 --------GKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDN 139 (324)
T ss_dssp --------EEEEEEECSSCEEEEEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHH
T ss_pred --------CcEEEEEECCCCeEEEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHh
Confidence 7899999999989999999999999999999999999987653 2 47899999999877643
Q ss_pred -hhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCccc
Q 039412 227 -AQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQF 302 (433)
Q Consensus 227 -~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~ 302 (433)
.+++.|.+++||+||.+. ....|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+..+
T Consensus 140 l~~qg~i~~~~FS~~l~~~--~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~------ 207 (324)
T 1am5_A 140 MGSQSLVEKDLFSFYLSGG--GANGSEVMLGGVDNSHYTGSIHWIPVTA----EKYWQVALDGITVNGQTAACE------ 207 (324)
T ss_dssp HHHTTCSSSSEEEEECCST--TCSCEEEEESSCCGGGBCSCCEEEEEEE----ETTEEEEECEEEETTEECCCC------
T ss_pred HHhcCCCCCCEEEEEecCC--CCCCcEEEECccCHHHcCCceEEEecCC----CcEEEEEEeEEEECCceeecc------
Confidence 245778899999999884 3458999999999 679999999987 579999999999999875321
Q ss_pred CCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEE
Q 039412 303 NPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIH 381 (433)
Q Consensus 303 ~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~ 381 (433)
+ ..+||||||++++||++++++|.+++.+. ...+.+ ++|+.. ..+|+|+|+|+|.+++|++++|+++
T Consensus 208 ---~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-------~~~g~~~~~C~~~-~~~P~i~f~f~g~~~~i~~~~y~~~ 275 (324)
T 1am5_A 208 ---G-CQAIVDTGTSKIVAPVSALANIMKDIGAS-------ENQGEMMGNCASV-QSLPDITFTINGVKQPLPPSAYIEG 275 (324)
T ss_dssp ---C-EEEEECTTCSSEEECTTTHHHHHHHHTCE-------ECCCCEECCTTSS-SSSCCEEEEETTEEEEECHHHHEEE
T ss_pred ---C-ceEEEecCCccEECCHHHHHHHHHHhCCc-------ccCCcEEEeCCCc-ccCCcEEEEECCEEEEECHHHhccc
Confidence 2 68999999999999999999988876443 122334 899987 6899999999999999999999998
Q ss_pred ecCCCeEEE-EEEecCCC-CCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 382 STAGSITCL-AMAAAPDN-VNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 382 ~~~~~~~C~-~~~~~~~~-~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
. +..|+ +++..... ...+.||||+.|||++|+|||++++|||||+++
T Consensus 276 ~---~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 276 D---QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp S---SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred C---CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 6 34798 47765311 112579999999999999999999999999975
No 9
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=7.7e-59 Score=469.26 Aligned_cols=317 Identities=20% Similarity=0.355 Sum_probs=259.6
Q ss_pred ceeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC---CCCCCC-CCCCCCCccccccCCCcccC
Q 039412 80 KSVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV---GCSSTV-FNSAQSTTFKNLGCQAAQCK 155 (433)
Q Consensus 80 ~~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~---~C~~~~-y~~~~Sst~~~~~c~~~~C~ 155 (433)
...+||.+. .+.+|+++|.||||+|+++|+|||||+++||+|..|. .|..|+ |||++|+||+..
T Consensus 41 ~~~~~l~n~----~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~-------- 108 (478)
T 1qdm_A 41 GDIVALKNY----MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKN-------- 108 (478)
T ss_dssp SCSGGGCCG----GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCC--------
T ss_pred CceEEeEec----cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCCCCCCcccCCCeeeC--------
Confidence 356778753 3689999999999999999999999999999999996 698787 999999999986
Q ss_pred CCCCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC---CCCCCeEeecCCCCCch-------
Q 039412 156 QVPNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN---SVPPQGLLGLGRGSLSL------- 225 (433)
Q Consensus 156 ~~~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~---~~~~~GilGLg~~~~s~------- 225 (433)
++.|.+.|++|++.|.+++|+|+|++.+++++.|||++...+. ...++||||||++.++.
T Consensus 109 ----------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~ 178 (478)
T 1qdm_A 109 ----------GKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVW 178 (478)
T ss_dssp ----------CCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHH
T ss_pred ----------CcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccccccccceecccccccccCCCCcHH
Confidence 7899999999889999999999999999999999999987653 24689999999988774
Q ss_pred --hhhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCc
Q 039412 226 --LAQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGAL 300 (433)
Q Consensus 226 --~~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 300 (433)
+.+++.|.+++||+||.+..+....|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+.+.
T Consensus 179 ~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~----~~~w~v~l~~i~v~g~~~~~~---- 250 (478)
T 1qdm_A 179 YKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ----KGYWQFDMGDVLVGGKSTGFC---- 250 (478)
T ss_dssp HHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE----ETTEEEEECCEEETTEECSTT----
T ss_pred HHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC----CCeEEEEEeEEEECCEEEeec----
Confidence 2245788899999999884323458999999999 458999999986 579999999999999887543
Q ss_pred ccCCCCCCceEEccccceeeechHHHHHHHHHHHHHh----------------------cCC------------------
Q 039412 301 QFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRV----------------------GSN------------------ 340 (433)
Q Consensus 301 ~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~----------------------~~~------------------ 340 (433)
.++..+||||||+++++|++++++|.+++.+.. ...
T Consensus 251 ----~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~ 326 (478)
T 1qdm_A 251 ----AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTR 326 (478)
T ss_dssp ----TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC------
T ss_pred ----CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccc
Confidence 235789999999999999999999988774310 000
Q ss_pred ----------------------------------------------------------ccccCCCCc-cCCCCCCCCCce
Q 039412 341 ----------------------------------------------------------LTVTSLGGF-DTCYSVPIVAPT 361 (433)
Q Consensus 341 ----------------------------------------------------------~~~~~~~~~-~~C~~~~~~~P~ 361 (433)
......+.+ ++|... ..+|+
T Consensus 327 ~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~-~~lP~ 405 (478)
T 1qdm_A 327 GVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL-GSMPD 405 (478)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG-TTCCC
T ss_pred cccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc-ccccc
Confidence 000123445 899877 78999
Q ss_pred EEEEEeCcEEEeCCCCeEEEecCC-CeEEEE-EEecCCC-CCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 362 ITLMFSGMNVTLPQDNLLIHSTAG-SITCLA-MAAAPDN-VNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 362 i~f~f~g~~~~l~~~~y~~~~~~~-~~~C~~-~~~~~~~-~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
|+|+|+|++|+|+|++|+++...+ ...|++ |+..+.. ..++.||||+.|||++|+|||++++|||||++.
T Consensus 406 i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 406 IEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp EEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 999999999999999999987543 458986 6654311 123589999999999999999999999999863
No 10
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=4.7e-59 Score=457.77 Aligned_cols=310 Identities=21% Similarity=0.343 Sum_probs=262.8
Q ss_pred ceeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC---CCCCCC-CCCCCCCccccccCCCcccC
Q 039412 80 KSVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV---GCSSTV-FNSAQSTTFKNLGCQAAQCK 155 (433)
Q Consensus 80 ~~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~---~C~~~~-y~~~~Sst~~~~~c~~~~C~ 155 (433)
...+|+.+. .+..|+++|.||||+|+++|+|||||+++||+|..|. .|..++ |||++|+||+..
T Consensus 7 ~~~~~l~~~----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~-------- 74 (361)
T 1mpp_A 7 VDTPGLYDF----DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKET-------- 74 (361)
T ss_dssp EEEEEEEET----TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEE--------
T ss_pred cceEEeecC----CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEec--------
Confidence 355788753 3789999999999999999999999999999999998 898888 999999999987
Q ss_pred CCCCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCC------CC--CCCCeEeecCCCCCchhh
Q 039412 156 QVPNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATG------NS--VPPQGLLGLGRGSLSLLA 227 (433)
Q Consensus 156 ~~~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~------~~--~~~~GilGLg~~~~s~~~ 227 (433)
+|.|.+.|++|++.|.+++|+|+|++.+++++.|||++...+ .+ ...+||||||++..+...
T Consensus 75 ----------~~~~~i~Yg~Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 144 (361)
T 1mpp_A 75 ----------DYNLNITYGTGGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAME 144 (361)
T ss_dssp ----------EEEEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHH
T ss_pred ----------CCeEEEEECCceEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccccc
Confidence 689999999988999999999999999999999999998765 22 478999999998776533
Q ss_pred ---------------hhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEEC
Q 039412 228 ---------------QTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVG 289 (433)
Q Consensus 228 ---------------q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~ 289 (433)
+++.|.+++||+||.+. ...|.|+|||+| +.|++.|+|+........+|.|.|++|+|+
T Consensus 145 ~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~ 221 (361)
T 1mpp_A 145 AEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKID 221 (361)
T ss_dssp HHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEET
T ss_pred ccccccCCCHHHHHHHcCCCCCcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEEC
Confidence 45778999999999983 457999999999 679999999988432122899999999999
Q ss_pred CEEeecCCCCcccCCCCCCceE-EccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCC-ceEEEEE
Q 039412 290 RRVVDIPPGALQFNPTTGAGTI-IDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVA-PTITLMF 366 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~i-iDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~-P~i~f~f 366 (433)
++.+..+ .+..+| |||||++++||++++++|++++.+.. ....+.+ ++|+.. ..+ |+|+|+|
T Consensus 222 ~~~~~~~---------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~-----~~~~g~~~~~C~~~-~~~~p~i~f~f 286 (361)
T 1mpp_A 222 GSDAVSF---------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA-----TESQQGYTVPCSKY-QDSKTTFSLVL 286 (361)
T ss_dssp TEEEEEE---------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC-----EEETTEEEEEHHHH-TTCCCEEEEEE
T ss_pred CeeeccC---------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCcc-----cCCCCcEEEECCCc-ccCCCcEEEEE
Confidence 9887432 236899 99999999999999999888764431 1223334 899976 677 9999999
Q ss_pred --e-----CcEEEeCCCCeEEEecCCCeEEE-EEEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 367 --S-----GMNVTLPQDNLLIHSTAGSITCL-AMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 367 --~-----g~~~~l~~~~y~~~~~~~~~~C~-~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
+ |.+++|++++|+++...++..|+ +|+... . +.||||++|||++|+|||++++|||||+++|+
T Consensus 287 ~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~-~---~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~ 357 (361)
T 1mpp_A 287 QKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG-G---NQFIVGNLFLRFFVNVYDFGKNRIGFAPLASG 357 (361)
T ss_dssp ECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES-S---SCCEEEHHHHTTEEEEEETTTTEEEEEEBCTT
T ss_pred EcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC-C---CCEEEChHHhccEEEEEECCCCEEEEEEcccC
Confidence 7 78999999999998764456897 577652 2 46999999999999999999999999999995
No 11
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.1e-59 Score=452.95 Aligned_cols=298 Identities=21% Similarity=0.380 Sum_probs=252.9
Q ss_pred eecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC--CCCCCC-CCCCCCCccccccCCCcccCCCCC
Q 039412 83 VPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV--GCSSTV-FNSAQSTTFKNLGCQAAQCKQVPN 159 (433)
Q Consensus 83 ~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~--~C~~~~-y~~~~Sst~~~~~c~~~~C~~~~~ 159 (433)
.||.+. .+.+|+++|.||||+|+++|++||||+++||+|..|. .|..++ |||++|+|++..
T Consensus 3 ~~l~n~----~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~------------ 66 (320)
T 4aa9_A 3 EPLTSY----LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNL------------ 66 (320)
T ss_dssp -----C----CCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEE------------
T ss_pred ccceec----cCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcC------------
Confidence 456543 4789999999999999999999999999999999998 577777 999999999998
Q ss_pred CCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC---CCCCCeEeecCCCCCch---------hh
Q 039412 160 PTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN---SVPPQGLLGLGRGSLSL---------LA 227 (433)
Q Consensus 160 ~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~---~~~~~GilGLg~~~~s~---------~~ 227 (433)
+|.|.+.|++|++.|.+++|+|+|++.+++++.|||++...+. ....+||||||++..+. +.
T Consensus 67 ------~~~~~i~Yg~gs~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 140 (320)
T 4aa9_A 67 ------GKPLSIHYGTGSMEGFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMM 140 (320)
T ss_dssp ------EEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHH
T ss_pred ------CcEEEEEECCcEEEEEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHH
Confidence 7899999999889999999999999999999999999987652 24679999999986553 23
Q ss_pred hhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCC
Q 039412 228 QTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNP 304 (433)
Q Consensus 228 q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~ 304 (433)
+++.|.+++||+||.+. ...|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+..+
T Consensus 141 ~~g~i~~~~Fs~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~-------- 205 (320)
T 4aa9_A 141 DRHLVARDLFSVYMDRN---GQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTINGVAVACV-------- 205 (320)
T ss_dssp HTTCSSSSEEEEECCSS---SSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEETTEEEEST--------
T ss_pred hCCCCCCceEEEEeCCC---CCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEECCEEeccC--------
Confidence 45889999999999983 458999999999 569999999986 589999999999999988643
Q ss_pred CCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEec
Q 039412 305 TTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHST 383 (433)
Q Consensus 305 ~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~ 383 (433)
.+..+||||||++++||++++++|.+++. +. ....+.+ ++|+.. ..+|+|+|+|+|++++|++++|+.+.
T Consensus 206 -~~~~~iiDsGtt~~~lP~~~~~~i~~~~~----~~--~~~~g~~~~~C~~~-~~~p~i~f~f~g~~~~l~~~~y~~~~- 276 (320)
T 4aa9_A 206 -GGCQAILDTGTSVLFGPSSDILKIQMAIG----AT--ENRYGEFDVNCGNL-RSMPTVVFEINGRDYPLSPSAYTSKD- 276 (320)
T ss_dssp -TCEEEEECTTCSSEEEEHHHHHHHHHHTT----CE--ECTTSCEEECGGGG-GGCCCEEEEETTEEEEECHHHHEEEE-
T ss_pred -CCcEEEEECCCCcEECCHHHHHHHHHHhC----Cc--ccCCCcEEEeCCCC-CcCceEEEEECCEEEEECHHHhccCC-
Confidence 34689999999999999999999877753 22 1223445 899987 78999999999999999999999873
Q ss_pred CCCeEEEE-EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 384 AGSITCLA-MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 384 ~~~~~C~~-~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
+..|+. ++....+ +.||||++|||++|+|||++++|||||+++
T Consensus 277 --~~~C~~~i~~~~~~---~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 --QGFCTSGFQGDNNS---ELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp --TTEEEESEEEETTC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCeEEEEEEcCCCC---CcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 348985 7764433 469999999999999999999999999975
No 12
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=9.6e-59 Score=449.87 Aligned_cols=304 Identities=24% Similarity=0.448 Sum_probs=255.7
Q ss_pred eeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC--CCCCCC-CCCCCCCccccccCCCcccCCCC
Q 039412 82 VVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV--GCSSTV-FNSAQSTTFKNLGCQAAQCKQVP 158 (433)
Q Consensus 82 ~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~--~C~~~~-y~~~~Sst~~~~~c~~~~C~~~~ 158 (433)
.+||.. .+..|+++|.||||+|+++|+|||||+++||+|..|. .|..++ |||++|+||+..
T Consensus 4 ~~~l~~-----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~----------- 67 (329)
T 1htr_B 4 YEPMAY-----MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTN----------- 67 (329)
T ss_dssp CCGGGG-----TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEE-----------
T ss_pred eeeeEE-----cCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEEC-----------
Confidence 356652 3789999999999999999999999999999999998 487787 999999999987
Q ss_pred CCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC---CCCCCeEeecCCCCCchh---------
Q 039412 159 NPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN---SVPPQGLLGLGRGSLSLL--------- 226 (433)
Q Consensus 159 ~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~---~~~~~GilGLg~~~~s~~--------- 226 (433)
+|.|.+.|++|++.|.+++|+|+|++.+++++.|||++...+. ....+||||||++..+..
T Consensus 68 -------~~~~~i~Yg~gs~~G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 140 (329)
T 1htr_B 68 -------GQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGM 140 (329)
T ss_dssp -------EEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHH
T ss_pred -------CcEEEEEeCCCCeEEEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHH
Confidence 7899999999888999999999999999999999999987653 247899999999887643
Q ss_pred hhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccC
Q 039412 227 AQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFN 303 (433)
Q Consensus 227 ~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 303 (433)
.+++.|.+++||+||.+... ...|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+...
T Consensus 141 ~~qg~i~~~~Fs~~L~~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~------- 208 (329)
T 1htr_B 141 VQEGALTSPVFSVYLSNQQG-SSGGAVVFGGVDSSLYTGQIYWAPVTQ----ELYWQIGIEEFLIGGQASGWC------- 208 (329)
T ss_dssp HHTTCSSSSEEEEEECSSCS-SEEEEEEESSCCGGGEEEEEEEEEBCS----SSSCEEEECEEEETTEECCTT-------
T ss_pred HhcCCCCCCEEEEEEcCCCC-CCCcEEEEcccCHHHcCCceEEEECCC----CceEEEEEeEEEECCceeeec-------
Confidence 24578889999999988421 237999999999 568999999986 579999999999999876411
Q ss_pred CCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEe
Q 039412 304 PTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHS 382 (433)
Q Consensus 304 ~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~ 382 (433)
..+..+||||||++++||++++++|.+++.+.. ...+.+ ++|+.. ..+|+|+|+|+|++++|++++|+++.
T Consensus 209 -~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~------~~~g~~~~~C~~~-~~~P~i~f~f~g~~~~i~~~~y~~~~ 280 (329)
T 1htr_B 209 -SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE------DEYGQFLVNCNSI-QNLPSLTFIINGVEFPLPPSSYILSN 280 (329)
T ss_dssp -TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE------CTTSCEEECGGGG-GGSCCEEEEETTEEEEECHHHHEEEC
T ss_pred -CCCceEEEecCCccEECCHHHHHHHHHHhCCee------cCCCeEEEeCCCc-ccCCcEEEEECCEEEEECHHHhcccC
Confidence 235789999999999999999999887764321 122344 899986 67899999999999999999999986
Q ss_pred cCCCeEEEE-EEecCCC-CCCc-eeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 383 TAGSITCLA-MAAAPDN-VNSV-LNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 383 ~~~~~~C~~-~~~~~~~-~~~~-~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
. + .|+. ++..... ..++ .||||+.|||++|+|||++++|||||+++
T Consensus 281 ~--g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 281 N--G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp S--S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C--C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 5 2 8984 7765321 1124 79999999999999999999999999875
No 13
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.3e-58 Score=449.28 Aligned_cols=297 Identities=20% Similarity=0.365 Sum_probs=253.8
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeee-----CCCCCCCCCCC-CCCCCCCccccccCCCccc
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVP-----CTGCVGCSSTV-FNSAQSTTFKNLGCQAAQC 154 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~-----~~~C~~C~~~~-y~~~~Sst~~~~~c~~~~C 154 (433)
+.+|+.+. +..|+++|.||||+|+++|+|||||+++||+ |..|..|..++ |||++|+||+..
T Consensus 3 i~~~l~~~-----~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~------- 70 (339)
T 3fv3_A 3 ISLSLINE-----GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNL------- 70 (339)
T ss_dssp EEEEEEEC-----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEE-------
T ss_pred eeeEEEcC-----CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeC-------
Confidence 67888876 7899999999999999999999999999998 66666888787 999999999998
Q ss_pred CCCCCCCCCCCCceeEEecCCC-ceEEeEEEEEEEecCcccCceEEEeeeccCCCCCCCCeEeecCCCCCc---------
Q 039412 155 KQVPNPTCGGGACAFNLTYGSS-TIAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQGLLGLGRGSLS--------- 224 (433)
Q Consensus 155 ~~~~~~~C~~~~~~~~~~Y~~g-~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~GilGLg~~~~s--------- 224 (433)
+|.|.+.|++| .+.|.+++|+|+|++.+++++.|||++...+ .+||||||++..+
T Consensus 71 -----------~~~~~i~Yg~gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~----~~GilGLg~~~~~~~~~~~~~~ 135 (339)
T 3fv3_A 71 -----------GAAFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSV----DQGILGIGYTSNEAVYDTSGRQ 135 (339)
T ss_dssp -----------EEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEESS----SSCEEECSCGGGCCCBCTTSCB
T ss_pred -----------CceEEEEECCCceEEEEEEEEEEEECCEEECceEEEEEEecCC----CceeEEecCccccccccccccc
Confidence 79999999997 7889999999999999999999999998763 6999999998754
Q ss_pred -------hh---hhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCE
Q 039412 225 -------LL---AQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRR 291 (433)
Q Consensus 225 -------~~---~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~ 291 (433)
++ .+++.|.+++||+||.+. ....|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++
T Consensus 136 ~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~--~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~ 209 (339)
T 3fv3_A 136 TTPNYDNVPVTLKKQGKIRTNAYSLYLNSP--SAETGTIIFGGVDNAKYSGKLVAEQVTS----SQALTISLASVNLKGS 209 (339)
T ss_dssp CSCCCCCHHHHHHHTTSCSSSEEEEECCCT--TCSEEEEEETEEETTSBSSCCEEEEBCC----SSSCEEEEEEEEESSC
T ss_pred cCccCCcHHHHHHHCCCCCCceEEEEECCC--CCCCeEEEEeeechHHeecceEEEeccc----CccEEEEEEEEEECCE
Confidence 22 345788999999999873 3458999999998 679999999987 4699999999999998
Q ss_pred EeecCCCCcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEe-Cc
Q 039412 292 VVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFS-GM 369 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~-g~ 369 (433)
.+... ..++|||||++++||++++++|++++.+..... ....+.+ ++|+. ..+|+|+|+|+ |.
T Consensus 210 ~~~~~-----------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--~~~~~~~~~~C~~--~~~p~i~f~f~~g~ 274 (339)
T 3fv3_A 210 SFSFG-----------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQV--ARDQYLYFIDCNT--DTSGTTVFNFGNGA 274 (339)
T ss_dssp EEEEE-----------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE--ETTEEEEEECTTC--CCCSEEEEEETTSC
T ss_pred eecCC-----------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc--cccCceEEEecCC--CCCCcEEEEECCCC
Confidence 87642 589999999999999999999888875432210 0123334 89996 36899999995 78
Q ss_pred EEEeCCCCeEEEecCCCeEEE-EEEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 370 NVTLPQDNLLIHSTAGSITCL-AMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 370 ~~~l~~~~y~~~~~~~~~~C~-~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
+++||+++|+++.. +..|+ ++++ . +.||||+.|||++|+|||++++|||||+++|+
T Consensus 275 ~~~v~~~~~~~~~~--~~~C~~~i~~--~----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 331 (339)
T 3fv3_A 275 KITVPNTEYVYQNG--DGTCLWGIQP--S----DDTILGDNFLRHAYLLYNLDANTISIAQVKYT 331 (339)
T ss_dssp EEEEEGGGGEEECS--SSCEEESEEE--C----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred EEEECHHHheeeCC--CCeEEEEEEe--C----CcEEeChHHHhCEEEEEECCCCEEEEEecCCC
Confidence 99999999999853 34795 5766 2 35999999999999999999999999999995
No 14
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3e-58 Score=445.34 Aligned_cols=291 Identities=18% Similarity=0.344 Sum_probs=246.4
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCC-CCCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCceeEE
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGC-SSTV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNL 171 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C-~~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~~ 171 (433)
+..|+++|.||||+|+++|+|||||+++||+|..|..| ..++ |||++|+||+.. .|.|.+
T Consensus 14 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c~~~~~~y~~~~SsT~~~~------------------~~~~~i 75 (325)
T 2apr_A 14 DIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQTKYDPNQSSTYQAD------------------GRTWSI 75 (325)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSCCTTSCCBCGGGCTTCEEE------------------EEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchHhcCCCCCCcccCCCeeeC------------------CCEEEE
Confidence 78999999999999999999999999999999999988 4457 999999999986 799999
Q ss_pred ecCCCc-eEEeEEEEEEEecCcccCceEEEeeeccCCCC--CCCCeEeecCCCCCch-------hh---hhccccCCceE
Q 039412 172 TYGSST-IAANLSQDTISLATDIVPGYTFGCIQKATGNS--VPPQGLLGLGRGSLSL-------LA---QTQNLYQSTFS 238 (433)
Q Consensus 172 ~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~--~~~~GilGLg~~~~s~-------~~---q~~~i~~~~Fs 238 (433)
.|++|+ +.|.+++|+|+|++.+++++.|||++...+.+ ...+||||||++..+. +. +++.|.+++||
T Consensus 76 ~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS 155 (325)
T 2apr_A 76 SYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFG 155 (325)
T ss_dssp ECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEE
T ss_pred EECCCCCEEEEEEEEEEEECCEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEE
Confidence 999976 78999999999999999999999999865432 2489999999987653 22 35778899999
Q ss_pred EecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccc
Q 039412 239 YCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSG 315 (433)
Q Consensus 239 ~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSG 315 (433)
+||.+.. ....|.|+|||+| +.|++.|+|+... ..+|.|++++|+|++ .+.. .+..+|||||
T Consensus 156 ~~l~~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~vg~-~~~~----------~~~~~iiDSG 220 (325)
T 2apr_A 156 VYLGKAK-NGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGT-STVA----------SSFDGILDTG 220 (325)
T ss_dssp EEECCGG-GTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETT-EEEE----------CCEEEEECTT
T ss_pred EEecCCC-CCCCCEEEEccCCchhccCceEEEEccCC---CCEEEEEEeEEEECC-EecC----------CCceEEEecC
Confidence 9997632 2457999999998 6799999999753 578999999999999 3321 2468999999
Q ss_pred cceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEecCCCeEEEE-EE
Q 039412 316 TVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHSTAGSITCLA-MA 393 (433)
Q Consensus 316 t~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~~C~~-~~ 393 (433)
|++++||+++|++|++++.+.+... +.| ++|+. ..+|+|+|+|+|.+++||+++|+++.. +..|++ ++
T Consensus 221 Ts~~~lP~~~~~~~~~~~~~~~~~~------g~~~~~C~~--~~~p~i~f~f~g~~~~ip~~~~~~~~~--~~~C~~~i~ 290 (325)
T 2apr_A 221 TTLLILPNNIAASVARAYGASDNGD------GTYTISCDT--SAFKPLVFSINGASFQVSPDSLVFEEF--QGQCIAGFG 290 (325)
T ss_dssp CSSEEEEHHHHHHHHHHHTCEECSS------SCEEECSCG--GGCCCEEEEETTEEEEECGGGGEEEEE--TTEEEESEE
T ss_pred CccEECCHHHHHHHHHHHhcccCCC------CeEEEECCC--CCCCcEEEEECCEEEEECHHHEEEcCC--CCeEEEEEE
Confidence 9999999999999988886654321 345 79984 348999999999999999999998754 458987 55
Q ss_pred ecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 394 AAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 394 ~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
... . +.||||+.|||++|+|||++++|||||+++
T Consensus 291 ~~~-~---~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 291 YGN-W---GFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EES-S---SSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cCC-C---CCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 543 2 469999999999999999999999999874
No 15
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.1e-58 Score=452.06 Aligned_cols=309 Identities=20% Similarity=0.333 Sum_probs=258.6
Q ss_pred ceeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC----CCCCCC-CCCCCCCccccccCCCccc
Q 039412 80 KSVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV----GCSSTV-FNSAQSTTFKNLGCQAAQC 154 (433)
Q Consensus 80 ~~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~----~C~~~~-y~~~~Sst~~~~~c~~~~C 154 (433)
.+.+||.+. .+.+|+++|.||||+|+++|++||||+++||+|..|. .|..++ |||++|+||+..
T Consensus 7 ~~~~~l~n~----~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~------- 75 (341)
T 3k1w_A 7 TSSVILTNY----MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHN------- 75 (341)
T ss_dssp CEEEEEEEE----TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEE-------
T ss_pred CccccceEc----cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeEC-------
Confidence 467888753 3789999999999999999999999999999999998 577777 999999999987
Q ss_pred CCCCCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC---CCCCCeEeecCCCCCch------
Q 039412 155 KQVPNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN---SVPPQGLLGLGRGSLSL------ 225 (433)
Q Consensus 155 ~~~~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~---~~~~~GilGLg~~~~s~------ 225 (433)
+|.|.+.|++|++.|.+++|+|+|++.++ ++.|||++...+. ....+||||||++..+.
T Consensus 76 -----------~~~~~i~Yg~gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 143 (341)
T 3k1w_A 76 -----------GTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPI 143 (341)
T ss_dssp -----------EEEEEEEETTEEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCH
T ss_pred -----------CCEEEEEECCcEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCH
Confidence 79999999998899999999999999999 9999999987653 34689999999987763
Q ss_pred ---hhhhccccCCceEEecCCCC--CCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCC
Q 039412 226 ---LAQTQNLYQSTFSYCLPSFK--ALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPP 297 (433)
Q Consensus 226 ---~~q~~~i~~~~Fs~~l~~~~--~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (433)
+.+++.|.+++||+||.+.. +....|.|+|||+| +.|+++|+|+.. ..+|.|.+++|+|+++.+..+
T Consensus 144 ~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~- 218 (341)
T 3k1w_A 144 FDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVGSSTLLCE- 218 (341)
T ss_dssp HHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEEECCEEETTEEEECT-
T ss_pred HHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC----CCEEEEEEeEEEECCEEeecC-
Confidence 33458899999999999853 12347999999999 568999999986 689999999999999875432
Q ss_pred CCcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCccCCCCCCCCCceEEEEEeCcEEEeCCCC
Q 039412 298 GALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGFDTCYSVPIVAPTITLMFSGMNVTLPQDN 377 (433)
Q Consensus 298 ~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~P~i~f~f~g~~~~l~~~~ 377 (433)
.+..+||||||++++||++++++|++++.+.. . ..+..++|... ..+|+|+|+|+|++++|++++
T Consensus 219 --------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~-----~-~~g~~~~C~~~-~~~p~i~f~f~g~~~~l~~~~ 283 (341)
T 3k1w_A 219 --------DGCLALVDTGASYISGSTSSIEKLMEALGAKK-----R-LFDYVVKCNEG-PTLPDISFHLGGKEYTLTSAD 283 (341)
T ss_dssp --------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----C-SSCEEEEGGGG-GGCCCEEEEETTEEEEECHHH
T ss_pred --------CCCEEEEECCCChhcCCHHHHHHHHHHcCCee-----c-CCCeEEeCCCC-CcCCcEEEEECCEEEEECHHH
Confidence 34689999999999999999999887764321 1 12323899976 678999999999999999999
Q ss_pred eEEEecC-CCeEEEE-EEecCC-CCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 378 LLIHSTA-GSITCLA-MAAAPD-NVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 378 y~~~~~~-~~~~C~~-~~~~~~-~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
|+++... ++..|+. ++..+. ....+.||||++|||++|+|||++++|||||+++
T Consensus 284 ~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 284 YVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp HBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred heeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9987543 3579985 666321 1112579999999999999999999999999975
No 16
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-58 Score=448.53 Aligned_cols=294 Identities=20% Similarity=0.329 Sum_probs=249.0
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCC--CCC---------CCCCCC-CCCCCCCcccccc
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCT--GCV---------GCSSTV-FNSAQSTTFKNLG 148 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~--~C~---------~C~~~~-y~~~~Sst~~~~~ 148 (433)
+++|+.+. +..|+++|.||||+|+++|+|||||+++||+|. .|. .|..++ |||++|+||+..
T Consensus 3 ~~~~l~~~-----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~- 76 (334)
T 1j71_A 3 VPTTLINE-----GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNL- 76 (334)
T ss_dssp EEEEEEEC-----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEE-
T ss_pred eeEEEecC-----CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccC-
Confidence 56788876 789999999999999999999999999999865 675 476677 999999999987
Q ss_pred CCCcccCCCCCCCCCCCCceeEEecCCCc-eEEeEEEEEEEecCcccCceEEEeeeccCCCCCCCCeEeecCCCCC----
Q 039412 149 CQAAQCKQVPNPTCGGGACAFNLTYGSST-IAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQGLLGLGRGSL---- 223 (433)
Q Consensus 149 c~~~~C~~~~~~~C~~~~~~~~~~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~GilGLg~~~~---- 223 (433)
+|.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ..+||||||++..
T Consensus 77 -----------------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~----~~~GilGLg~~~~~~~~ 135 (334)
T 1j71_A 77 -----------------NQDFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS----VDQGIMGIGFTADEAGY 135 (334)
T ss_dssp -----------------EEEEEEEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES----SSSCEEECSCGGGSSTT
T ss_pred -----------------CCceEEEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC----CCccEEEEcCCcccCcc
Confidence 799999999976 67999999999999999999999999874 6899999999765
Q ss_pred ----chhh---hhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEe
Q 039412 224 ----SLLA---QTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVV 293 (433)
Q Consensus 224 ----s~~~---q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~ 293 (433)
+++. +++.|.+++||+||.+. ....|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~--~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 136 NLYDNVPVTLKKQGIINKNAYSLYLNSE--DASTGKIIFGGVDNAKYTGTLTALPVTS----SVELRVHLGSINFDGTSV 209 (334)
T ss_dssp CCCCCHHHHHHHTTSCSSSEEEEECCCT--TCSEEEEEETEEETTSEEEEEEEEECCC----SSSCEEEEEEEEETTEEE
T ss_pred ccCCcHHHHHHHCCCCCccEEEEEeCCC--CCCCeEEEEeeechHHccCceEEEEccC----CCeEEEEEeEEEECCEec
Confidence 3333 45788899999999873 3558999999998 468999999987 469999999999999887
Q ss_pred ecCCCCcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEE-eCcEE
Q 039412 294 DIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMF-SGMNV 371 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f-~g~~~ 371 (433)
..+ ..+||||||++++||++++++|++++.+... ....... ++|+. +|.|+|+| +|+++
T Consensus 210 ~~~-----------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~~~~~~~~C~~----~p~i~f~f~~g~~~ 270 (334)
T 1j71_A 210 STN-----------ADVVLDSGTTITYFSQSTADKFARIVGATWD----SRNEIYRLPSCDL----SGDAVFNFDQGVKI 270 (334)
T ss_dssp EEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TTTTEEECSSSCC----CSEEEEEESTTCEE
T ss_pred cCC-----------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CCCceEEEEcCCC----CCceEEEEcCCcEE
Confidence 532 5899999999999999999998888754431 1111223 79984 59999999 57999
Q ss_pred EeCCCCeEEEecCCCeEEEE-EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 372 TLPQDNLLIHSTAGSITCLA-MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 372 ~l~~~~y~~~~~~~~~~C~~-~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
+|++++|+++..+ +..|+. +... + .||||+.|||++|+|||++++|||||+++|+
T Consensus 271 ~i~~~~y~~~~~~-~~~C~~~i~~~-~-----~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 326 (334)
T 1j71_A 271 TVPLSELILKDSD-SSICYFGISRN-D-----ANILGDNFLRRAYIVYDLDDKTISLAQVKYT 326 (334)
T ss_dssp EEEGGGGEEECSS-SSCEEESEEEC-T-----TCEECHHHHTTEEEEEETTTTEEEEEEECCC
T ss_pred EECHHHheeecCC-CCeeEEEEeEC-C-----CcEEChHhhccEEEEEECCCCEEEEEecCCC
Confidence 9999999998654 335986 5543 2 4999999999999999999999999999995
No 17
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.9e-58 Score=450.09 Aligned_cols=298 Identities=20% Similarity=0.350 Sum_probs=249.3
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCC--CCC---------CCCCCC-CCCCCCCcccccc
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCT--GCV---------GCSSTV-FNSAQSTTFKNLG 148 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~--~C~---------~C~~~~-y~~~~Sst~~~~~ 148 (433)
+.+|+.+. +..|+++|.||||+|+++|+|||||+++||++. .|. .|..++ |||++|+||+..
T Consensus 3 v~~~l~~~-----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~- 76 (342)
T 2qzx_A 3 VAVTLHNE-----AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNL- 76 (342)
T ss_dssp EEEEEEEC-----SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEE-
T ss_pred eeEEEecC-----CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccC-
Confidence 56788766 789999999999999999999999999999865 675 476677 999999999987
Q ss_pred CCCcccCCCCCCCCCCCCceeEEecCCCc-eEEeEEEEEEEecCcccCceEEEeeeccCCCCCCCCeEeecCCCCC----
Q 039412 149 CQAAQCKQVPNPTCGGGACAFNLTYGSST-IAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQGLLGLGRGSL---- 223 (433)
Q Consensus 149 c~~~~C~~~~~~~C~~~~~~~~~~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~GilGLg~~~~---- 223 (433)
+|.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ..+||||||++..
T Consensus 77 -----------------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~----~~~GilGLg~~~~~~~~ 135 (342)
T 2qzx_A 77 -----------------NTRFDIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS----ARKGILGIGFQSGEATE 135 (342)
T ss_dssp -----------------EEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC----SSSCEEECSCGGGCSSS
T ss_pred -----------------CCcEEEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC----CCcCEEEEccccccCCC
Confidence 799999999976 67999999999999999999999999874 6899999999764
Q ss_pred ----chhh---hhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEe
Q 039412 224 ----SLLA---QTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVV 293 (433)
Q Consensus 224 ----s~~~---q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~ 293 (433)
+++. +++.|.+++||+||.+. ....|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~--~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 136 FDYDNLPISLRNQGIIGKAAYSLYLNSA--EASTGQIIFGGIDKAKYSGSLVDLPITS----EKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp SCCCCHHHHHHHTTSSSSSEEEEECCCT--TCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEEEEEEEETTEEE
T ss_pred ccCccHHHHHHHCCCcCccEEEEEeCCC--CCCCeEEEECccchhhEecceEEEeccC----CceEEEEEeEEEECCEec
Confidence 3333 35788899999999873 3558999999998 678999999987 468999999999999887
Q ss_pred ecCCCCcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEE-eCcEE
Q 039412 294 DIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMF-SGMNV 371 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f-~g~~~ 371 (433)
..+ ..+||||||++++||++++++|++++.+..... ......+ ++|+. +|.|+|+| +|+++
T Consensus 210 ~~~-----------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~--~~~~~~~~~~C~~----~p~i~f~f~~g~~~ 272 (342)
T 2qzx_A 210 DAN-----------TNVLLDSGTTISYFTRSIVRNILYAIGAQMKFD--SAGNKVYVADCKT----SGTIDFQFGNNLKI 272 (342)
T ss_dssp EEE-----------EEEEECTTCSSEEECHHHHHHHHHHHTCEEEEC--TTSCEEEEECTTC----CCEEEEEETTTEEE
T ss_pred CCC-----------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeec--cCCCcEEEEECCC----CCcEEEEECCCcEE
Confidence 532 589999999999999999999888875443211 1112134 89974 59999999 57899
Q ss_pred EeCCCCeEEEec----CCCeEEEEEEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 372 TLPQDNLLIHST----AGSITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 372 ~l~~~~y~~~~~----~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
+|++++|+++.. ++...|++.+...+ .||||+.|||++|+|||++++|||||+++|+
T Consensus 273 ~i~~~~~~~~~~~~~~~~~~~C~~~i~~~~-----~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 2qzx_A 273 SVPVSEFLFQTYYTSGKPFPKCEVRIRESE-----DNILGDNFLRSAYVVYNLDDKKISMAPVKYT 333 (342)
T ss_dssp EEEGGGGEECCBCTTSCBCSSEEESEEECS-----SCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred EEcHHHhcccccccCCCCCCccEEEEecCC-----CcEeChHhhhcEEEEEECCCCEEEEEeeCCC
Confidence 999999998742 22357987333222 4999999999999999999999999999995
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=7.6e-58 Score=443.32 Aligned_cols=294 Identities=21% Similarity=0.343 Sum_probs=245.4
Q ss_pred CCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCC--CCCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCcee
Q 039412 93 QSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGC--SSTV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAF 169 (433)
Q Consensus 93 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C--~~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~ 169 (433)
.+..|+++|.||||+|+++|+|||||+++||+|..|..| ..++ |||++|+||+.++ .|.|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~-----------------~~~~ 75 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVS-----------------GASW 75 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECT-----------------TCBE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcC-----------------CCeE
Confidence 378999999999999999999999999999999999976 5667 9999999999864 6899
Q ss_pred EEecCCCc-eEEeEEEEEEEecCcccCceEEEeeeccCCCC---CCCCeEeecCCCCCchhh---------hh-ccccCC
Q 039412 170 NLTYGSST-IAANLSQDTISLATDIVPGYTFGCIQKATGNS---VPPQGLLGLGRGSLSLLA---------QT-QNLYQS 235 (433)
Q Consensus 170 ~~~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~---~~~~GilGLg~~~~s~~~---------q~-~~i~~~ 235 (433)
.+.|++|+ +.|.+++|+|+|++.+++++.|||++...+.+ ...+||||||++..+... ++ ..+.++
T Consensus 76 ~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~~ 155 (329)
T 3c9x_A 76 SISYGDGSSSSGDVYTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASSLAEP 155 (329)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTTSSSS
T ss_pred EEEeCCCCcEEEEEEEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHhcCCC
Confidence 99999977 78999999999999999999999999875432 478999999998766422 21 237789
Q ss_pred ceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEE
Q 039412 236 TFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTII 312 (433)
Q Consensus 236 ~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ii 312 (433)
+||+||.+ ...|.|+|||+| +.|++.|+|+... ..+|.|++++|+|+++.+. ..+..+||
T Consensus 156 ~FS~~l~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~----------~~~~~aii 218 (329)
T 3c9x_A 156 LFTADLRH----GQNGSYNFGYIDTSVAKGPVAYTPVDNS---QGFWEFTASGYSVGGGKLN----------RNSIDGIA 218 (329)
T ss_dssp EEEEECCS----SSCEEEEESSCCGGGCSSCEEEEECBCT---TSSCEEEECCEEETTCCCC----------SCCEEEEE
T ss_pred EEEEEecC----CCCcEEEEeCcChhhcccceEEEEccCC---CceEEEEEeeEEECCEecc----------CCCceEEE
Confidence 99999987 348999999999 6799999999853 5799999999999997653 12468999
Q ss_pred ccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEecC-CCeEEE
Q 039412 313 DSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHSTA-GSITCL 390 (433)
Q Consensus 313 DSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~-~~~~C~ 390 (433)
||||++++||++++++|.+++. ++. .....+.| ++|+ ..+|+|+|+|+|++++||+++|+++..+ +...|+
T Consensus 219 DSGTt~~~lp~~~~~~i~~~i~---~a~-~~~~~~~~~~~C~---~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~ 291 (329)
T 3c9x_A 219 DTGTTLLLLDDNVVDAYYANVQ---SAQ-YDNQQEGVVFDCD---EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCF 291 (329)
T ss_dssp CTTCCSEEECHHHHHHHHTTCT---TCE-EETTTTEEEEETT---CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEE
T ss_pred ECCCCcEeCCHHHHHHHHHhCC---CcE-EcCCCCEEEEECC---CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEE
Confidence 9999999999999999766642 111 12223445 8998 5689999999999999999999987633 347998
Q ss_pred E-EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecC
Q 039412 391 A-MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARE 430 (433)
Q Consensus 391 ~-~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~ 430 (433)
+ ++..... +.||||+.|||++|+|||++++|||||+.
T Consensus 292 ~~i~~~~~~---~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 292 GGLQSSSGI---GINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp ESEEECTTT---TSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred EEEEcCCCC---CcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 7 6654422 47999999999999999999999999974
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.1e-57 Score=442.18 Aligned_cols=293 Identities=23% Similarity=0.394 Sum_probs=243.7
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCC-CCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCceeEE
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCS-STV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNL 171 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~-~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~~ 171 (433)
+..|+++|.||||+|+++|+|||||+++||+|..|..|. .++ |||++|+||+.++ .|.|.+
T Consensus 14 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~y~~~~SsT~~~~~-----------------~~~~~i 76 (329)
T 1oew_A 14 DDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVXQTIYTPSKSTTAKLLS-----------------GATWSI 76 (329)
T ss_dssp CCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-CCCBCGGGCTTCEEEE-----------------EEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCccccccCccCCccCccceecC-----------------CCeEEE
Confidence 789999999999999999999999999999999998763 566 9999999999864 689999
Q ss_pred ecCCCc-eEEeEEEEEEEecCcccCceEEEeeeccCCCC---CCCCeEeecCCCCCchh---------hhh-ccccCCce
Q 039412 172 TYGSST-IAANLSQDTISLATDIVPGYTFGCIQKATGNS---VPPQGLLGLGRGSLSLL---------AQT-QNLYQSTF 237 (433)
Q Consensus 172 ~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~---~~~~GilGLg~~~~s~~---------~q~-~~i~~~~F 237 (433)
.|++|+ +.|.+++|+|+|++.+++++.|||++...+.+ ...+||||||++..+.. .++ ..+.+++|
T Consensus 77 ~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~~~F 156 (329)
T 1oew_A 77 SYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSPVF 156 (329)
T ss_dssp ECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTTSSSSEE
T ss_pred EeCCCCcEEEEEEEEEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHhccCcEE
Confidence 999987 78999999999999999999999999875432 47899999999876642 222 23778999
Q ss_pred EEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEcc
Q 039412 238 SYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDS 314 (433)
Q Consensus 238 s~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDS 314 (433)
|+||.+ ...|.|+|||+| +.|++.|+|+... ..+|.|++++|+|+++.+.. .+..+||||
T Consensus 157 S~~L~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~----------~~~~aiiDS 219 (329)
T 1oew_A 157 TADLGY----HAPGTYNFGFIDTTAYTGSITYTAVSTK---QGFWEWTSTGYAVGSGTFKS----------TSIDGIADT 219 (329)
T ss_dssp EEECCS----SSCEEEEESCCCTTSSSSCCEEEECBCT---TSSCEEEEEEEEETTSCCEE----------EEEEEEECT
T ss_pred EEEccC----CCCeEEEEeccChHhcccceEEEEccCC---CceEEEEEeeEEECCeeccC----------CCceEEEeC
Confidence 999987 248999999998 6799999999853 57899999999999975531 236899999
Q ss_pred ccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEecC-CCeEEEE-
Q 039412 315 GTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHSTA-GSITCLA- 391 (433)
Q Consensus 315 Gt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~-~~~~C~~- 391 (433)
||++++||++++++|++++. ++. .....+.| ++|+ ..+|+|+|+|+|++++||+++|+++..+ +...|++
T Consensus 220 GTt~~~lP~~~~~~l~~~i~---~a~-~~~~~g~~~~~C~---~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~ 292 (329)
T 1oew_A 220 GTTLLYLPATVVSAYWAQVS---GAK-SSSSVGGYVFPCS---ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGG 292 (329)
T ss_dssp TCCSEEECHHHHHHHHTTST---TCE-EETTTTEEEEETT---CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEES
T ss_pred CCCCEECCHHHHHHHHHhCC---CcE-EcCCCCEEEEECC---CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEE
Confidence 99999999999999766642 111 12223445 8999 4689999999999999999999987532 3479987
Q ss_pred EEecCCCCCCceeEechhhhceeEEEEEC-CCCEEEEecC
Q 039412 392 MAAAPDNVNSVLNVIANMQQQNHRILYDV-PNSRLGVARE 430 (433)
Q Consensus 392 ~~~~~~~~~~~~~ilG~~fl~~~y~vfD~-~~~riGfa~~ 430 (433)
++..... +.||||+.|||++|+|||+ +++|||||+.
T Consensus 293 i~~~~~~---~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 293 IQSSAGI---GINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EEESTTT---SSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred EEeCCCC---CceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 6654422 4799999999999999999 9999999974
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=6.3e-58 Score=446.73 Aligned_cols=296 Identities=19% Similarity=0.336 Sum_probs=247.5
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCC--C---------CCCCCCC-CCCCCCCcccccc
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTG--C---------VGCSSTV-FNSAQSTTFKNLG 148 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~--C---------~~C~~~~-y~~~~Sst~~~~~ 148 (433)
+.+|+.+. +..|+++|.||||+|+++|++||||+++||++.. | ..|..++ |||++|+|++..
T Consensus 3 v~~~l~~~-----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~- 76 (342)
T 3pvk_A 3 VPVTLHNE-----QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDL- 76 (342)
T ss_dssp EEEEEEEC-----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEE-
T ss_pred cceEEecC-----CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeec-
Confidence 56777766 7899999999999999999999999999998653 5 3576677 999999999998
Q ss_pred CCCcccCCCCCCCCCCCCceeEEecCCCc-eEEeEEEEEEEecCcccCceEEEeeeccCCCCCCCCeEeecCCCCC----
Q 039412 149 CQAAQCKQVPNPTCGGGACAFNLTYGSST-IAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQGLLGLGRGSL---- 223 (433)
Q Consensus 149 c~~~~C~~~~~~~C~~~~~~~~~~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~GilGLg~~~~---- 223 (433)
+|.|.+.|++|+ +.|.+++|+|+|++.+++++.|||++... ..+||||||++..
T Consensus 77 -----------------~~~~~i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~----~~~GilGLg~~~~~~~~ 135 (342)
T 3pvk_A 77 -----------------NTPFKIGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS----IDQGILGVGYKTNEAGG 135 (342)
T ss_dssp -----------------EEEEEEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES----SSSCEEECSCGGGCSSC
T ss_pred -----------------CCeEEEEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC----CCccEEEecCccccccc
Confidence 799999999976 88999999999999999999999999875 6899999999874
Q ss_pred ---chh---hhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEee
Q 039412 224 ---SLL---AQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVD 294 (433)
Q Consensus 224 ---s~~---~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~ 294 (433)
+++ .+++.|.+++||+||.+. ....|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+.
T Consensus 136 ~~~~~~~~L~~qg~i~~~~fs~~l~~~--~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 136 SYDNVPVTLKKQGVIAKNAYSLYLNSP--DAATGQIIFGGVDNAKYSGSLIALPVTS----DRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp SSCCHHHHHHHTTSSSSSEEEEECCCT--TCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEEEEEEEETTEEEE
T ss_pred cCCcHHHHHHhcCCCCCceEEEEeCCC--CCCCcEEEECccCccceeeeeEEeecCc----cceEEEEEeEEEECCEEec
Confidence 343 345888999999999873 3457999999998 679999999987 4689999999999999886
Q ss_pred cCCCCcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCC--Cc-cCCCCCCCCCceEEEEEe-CcE
Q 039412 295 IPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLG--GF-DTCYSVPIVAPTITLMFS-GMN 370 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~--~~-~~C~~~~~~~P~i~f~f~-g~~ 370 (433)
.+ +..+||||||++++||++++++|.+++.+... ....+ .+ ++|+.. |+|+|+|+ |.+
T Consensus 210 ~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~----~~~~~~~~~~~~C~~~----p~i~f~f~~g~~ 271 (342)
T 3pvk_A 210 TD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLT----QDSNGNSFYEVDCNLS----GDVVFNFSKNAK 271 (342)
T ss_dssp EE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEE----ECTTSCEEEEECSCCC----SEEEEEESTTCE
T ss_pred CC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeec----ccCCCceEEEEecCCC----CceEEEECCCCE
Confidence 43 35899999999999999999998777643321 11112 24 899854 99999998 689
Q ss_pred EEeCCCCeEEEec--CC--CeEEEE-EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 371 VTLPQDNLLIHST--AG--SITCLA-MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 371 ~~l~~~~y~~~~~--~~--~~~C~~-~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
++||+++|+++.. ++ ...|+. +.. . +.||||+.|||++|+|||++++|||||+++|+
T Consensus 272 ~~vp~~~~~~~~~~~~g~~~~~C~~~i~~-~-----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 3pvk_A 272 ISVPASEFAASLQGDDGQPYDKCQLLFDV-N-----DANILGDNFLRSAYIVYDLDDNEISLAQVKYT 333 (342)
T ss_dssp EEEEGGGGEEC----------CEEESEEE-C-----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred EEEcHHHheeeccccCCCcCCeeEEEEee-C-----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCC
Confidence 9999999998632 21 267986 554 2 25999999999999999999999999999995
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=7.3e-58 Score=450.27 Aligned_cols=300 Identities=22% Similarity=0.344 Sum_probs=254.5
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC--CCCCCC-CCCCCCCccccccCCCcccCCC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV--GCSSTV-FNSAQSTTFKNLGCQAAQCKQV 157 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~--~C~~~~-y~~~~Sst~~~~~c~~~~C~~~ 157 (433)
..+||.+. .+..|+++|.||||+|++.|+|||||+++||+|..|. .|..++ |||++|+||+..
T Consensus 52 ~~~pl~~~----~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~---------- 117 (375)
T 1miq_A 52 DVIELDDV----ANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKD---------- 117 (375)
T ss_dssp BCCCGGGT----BCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEE----------
T ss_pred ceEEcccC----CCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEEC----------
Confidence 45777742 3689999999999999999999999999999999997 687787 999999999987
Q ss_pred CCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeec----cCCC-CCCCCeEeecCCCCCchh------
Q 039412 158 PNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQK----ATGN-SVPPQGLLGLGRGSLSLL------ 226 (433)
Q Consensus 158 ~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~----~~~~-~~~~~GilGLg~~~~s~~------ 226 (433)
+|.|.+.|++|++.|.+++|+|+|++.++++ .|||++. +..+ ....+||||||++..+..
T Consensus 118 --------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~ 188 (375)
T 1miq_A 118 --------GTKVDITYGSGTVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEPIYSSVEFDGILGLGWKDLSIGSIDPIV 188 (375)
T ss_dssp --------EEEEEEEETTEEEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTTHHHHSCCCEEEECSSCCTTCSSCCCHH
T ss_pred --------CcEEEEEeCCCeEEEEEEEEEEEEcCceECc-EEEEEEeccccccccccCCCceEEeCCCCcccccCCCCHH
Confidence 7899999999889999999999999999999 9999998 4311 247899999999887643
Q ss_pred ---hhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCc
Q 039412 227 ---AQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGAL 300 (433)
Q Consensus 227 ---~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 300 (433)
.+++.|.+++||+||.+. ....|.|+|||+| +.|++.|+|+.. ..+|.|.++ |+|+++.+ .
T Consensus 189 ~~l~~qg~i~~~~FS~~L~~~--~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~-i~v~g~~~--~---- 255 (375)
T 1miq_A 189 VELKNQNKIDNALFTFYLPVH--DVHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD-VHFGKQTM--E---- 255 (375)
T ss_dssp HHHHHTTSSSSSEEEEECCTT--CTTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEEE-EEETTEEE--E----
T ss_pred HHHHhccCcCCCEEEEEecCC--CCCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEEE-EEECCEEc--c----
Confidence 245778899999999984 2368999999999 568999999986 589999999 99999876 1
Q ss_pred ccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeE
Q 039412 301 QFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLL 379 (433)
Q Consensus 301 ~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~ 379 (433)
+..+||||||+++++|++++++|.+++.+.. ....+.+ ++|+. ..+|+|+|+|+|++++|++++|+
T Consensus 256 ------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~-----~~~~g~~~~~C~~--~~~P~i~f~f~g~~~~l~~~~yi 322 (375)
T 1miq_A 256 ------KANVIVDSGTTTITAPSEFLNKFFANLNVIK-----VPFLPFYVTTCDN--KEMPTLEFKSANNTYTLEPEYYM 322 (375)
T ss_dssp ------EEEEEECTTBSSEEECHHHHHHHHHHHTCEE-----CTTSSCEEEETTC--TTCCCEEEECSSCEEEECGGGSE
T ss_pred ------cceEEecCCCccEEcCHHHHHHHHHHhCCcc-----cCCCCeEEEECCC--CCCCcEEEEECCEEEEECHHHhE
Confidence 3689999999999999999999888764421 1223334 89996 47899999999999999999999
Q ss_pred EEecC-CCeEEE-EEEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 380 IHSTA-GSITCL-AMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 380 ~~~~~-~~~~C~-~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
++... +...|+ +|+..... .+.||||++|||++|+|||++++|||||+++
T Consensus 323 ~~~~~~g~~~C~~~~~~~~~~--~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 323 NPILEVDDTLCMITMLPVDID--SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EESSSSSCSEEEESEEECCSS--SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eeccCCCCCeEEEEEEECCCC--CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 98753 346898 57765531 1479999999999999999999999999874
No 22
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.2e-57 Score=455.92 Aligned_cols=299 Identities=20% Similarity=0.334 Sum_probs=253.3
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC--CCCCCC-CCCCCCCccccccCCCcccCCC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV--GCSSTV-FNSAQSTTFKNLGCQAAQCKQV 157 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~--~C~~~~-y~~~~Sst~~~~~c~~~~C~~~ 157 (433)
..+|+.+. .+..|+++|.||||+|++.|+|||||+++||+|..|. .|..++ |||++|+||+..
T Consensus 128 ~~~~L~n~----~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~---------- 193 (453)
T 2bju_A 128 DNIELVDF----QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKD---------- 193 (453)
T ss_dssp EEEEEEEE----TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEE----------
T ss_pred CceeeEec----CCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeEC----------
Confidence 45777642 3789999999999999999999999999999999997 787787 999999999987
Q ss_pred CCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccC--CC-C--CCCCeEeecCCCCCchh------
Q 039412 158 PNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKAT--GN-S--VPPQGLLGLGRGSLSLL------ 226 (433)
Q Consensus 158 ~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~--~~-~--~~~~GilGLg~~~~s~~------ 226 (433)
+|.|.+.|++|++.|.+++|+|++++.+++ +.|||++... +. + ...+||||||++..+..
T Consensus 194 --------~~~~~i~YgdGs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~ 264 (453)
T 2bju_A 194 --------GTKVEMNYVSGTVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIV 264 (453)
T ss_dssp --------EEEEEEECSSSEEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHH
T ss_pred --------CcEEEEEcCCCCeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHH
Confidence 799999999998999999999999999999 9999999876 43 2 47899999999876643
Q ss_pred ---hhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCc
Q 039412 227 ---AQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGAL 300 (433)
Q Consensus 227 ---~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 300 (433)
.+++.+.+++||+||.+. ....|.|+|||+| +.|++.|+|+.. ..+|.|.++ |+|++ .+ +
T Consensus 265 ~~L~~qg~i~~~~FS~~L~~~--~~~~G~l~fGg~D~~~y~G~l~~~pv~~----~~~w~V~l~-I~Vgg-~~-~----- 330 (453)
T 2bju_A 265 VELKNQNKIENALFTFYLPVH--DKHTGFLTIGGIEERFYEGPLTYEKLNH----DLYWQITLD-AHVGN-IM-L----- 330 (453)
T ss_dssp HHHHHTTSSSSCEEEEECCBT--TTBCEEEEESSCCGGGEEEEEEEEEEEE----ETTEEEEEE-EEETT-EE-E-----
T ss_pred HHHHHCCCCCCCEEEEEeCCC--CCCCeEEEECCCCHHHcCCceEEEecCC----CceEEEEEE-EEECc-EE-e-----
Confidence 245788899999999984 3468999999999 568999999987 579999999 99999 33 1
Q ss_pred ccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCC-Cc-cCCCCCCCCCceEEEEEeCcEEEeCCCCe
Q 039412 301 QFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLG-GF-DTCYSVPIVAPTITLMFSGMNVTLPQDNL 378 (433)
Q Consensus 301 ~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~-~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y 378 (433)
.+..+||||||+++++|++++++|.+++. +. ....+ .+ ++|+. ..+|+|+|+|+|.+++|++++|
T Consensus 331 -----~~~~aIiDSGTsl~~lP~~~~~~l~~~i~----~~--~~~~g~~~~v~C~~--~~~P~itf~fgg~~~~l~~~~y 397 (453)
T 2bju_A 331 -----EKANCIVDSGTSAITVPTDFLNKMLQNLD----VI--KVPFLPFYVTLCNN--SKLPTFEFTSENGKYTLEPEYY 397 (453)
T ss_dssp -----EEEEEEECTTCCSEEECHHHHHHHTTTSS----CE--ECTTSSCEEEETTC--TTCCCEEEECSSCEEEECHHHH
T ss_pred -----ccccEEEcCCCCeEecCHHHHHHHHHHhC----Cc--ccCCCceEEEecCC--CCCCcEEEEECCEEEEECHHHh
Confidence 14689999999999999999999776643 32 12223 34 89996 4789999999999999999999
Q ss_pred EEEecC-CCeEEE-EEEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 379 LIHSTA-GSITCL-AMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 379 ~~~~~~-~~~~C~-~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
+++... +...|+ ++++.+.. .+.||||++|||++|+|||++++|||||+++
T Consensus 398 i~~~~~~g~~~C~~~~~~~~~~--~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 398 LQHIEDVGPGLCMLNIIGLDFP--VPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp EEECTTTSTTEEEECEEECCCS--SCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EeecccCCCceEEEEEEeCCCC--CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 998754 456998 47765431 1479999999999999999999999999875
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.3e-56 Score=434.76 Aligned_cols=299 Identities=13% Similarity=0.226 Sum_probs=250.6
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC--CC--CCCC-CCCCCCCccccccCCCcccC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV--GC--SSTV-FNSAQSTTFKNLGCQAAQCK 155 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~--~C--~~~~-y~~~~Sst~~~~~c~~~~C~ 155 (433)
+..||.+ +.+..|+++|.|| +|+++|+|||||+++||+|..|. .| ..++ |||++| ||+..
T Consensus 7 ~~~~l~n----~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~-------- 71 (330)
T 1yg9_A 7 LYKLVHV----FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISD-------- 71 (330)
T ss_dssp SCSCEEE----EECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEE--------
T ss_pred eEeeeec----CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEEC--------
Confidence 4456654 2368999999999 99999999999999999999997 79 7788 999999 99986
Q ss_pred CCCCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCCC--CCCCeEeecCCCCCc-h-------
Q 039412 156 QVPNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGNS--VPPQGLLGLGRGSLS-L------- 225 (433)
Q Consensus 156 ~~~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~--~~~~GilGLg~~~~s-~------- 225 (433)
++.|.+.|++|++.|.+++|+|+|++.+++++.|||++.....+ ...+||||||++..+ .
T Consensus 72 ----------~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~ 141 (330)
T 1yg9_A 72 ----------GNVQVKFFDTGSAVGRGIEDSLTISQLTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVL 141 (330)
T ss_dssp ----------EEEEEEETTTEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHH
T ss_pred ----------CCEEEEEECCceEEEEEEEEEEEECCEEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHH
Confidence 68999999998889999999999999999999999999873222 368999999998877 2
Q ss_pred --hhhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCc
Q 039412 226 --LAQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGAL 300 (433)
Q Consensus 226 --~~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 300 (433)
+.+++.+ +++||+||.+..+....|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+. .
T Consensus 142 ~~l~~qg~i-~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~-~---- 211 (330)
T 1yg9_A 142 ENFVEENLI-APVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG----DDSWKFRLDGVKIGDTTVA-P---- 211 (330)
T ss_dssp HHHHHTTSS-CSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC----TTSCCEECSEEEETTEEEE-C----
T ss_pred HHHHhcCCC-CceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC----CCEEEEEeCeEEECCEEEc-C----
Confidence 2235778 99999999874222338999999999 568999999985 6899999999999998764 1
Q ss_pred ccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCC--CC-ccCCCCCCCCCceEEEEEeCcEEEeCCCC
Q 039412 301 QFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSL--GG-FDTCYSVPIVAPTITLMFSGMNVTLPQDN 377 (433)
Q Consensus 301 ~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~--~~-~~~C~~~~~~~P~i~f~f~g~~~~l~~~~ 377 (433)
.+..+||||||+++++|++++++|++++.+.. .... .. .++|+.. ..+|+|+|+|+|++++|++++
T Consensus 212 -----~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~-----~~~g~~~~~~~~C~~~-~~~p~i~f~fgg~~~~l~~~~ 280 (330)
T 1yg9_A 212 -----AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVV-----EKTTTRRICKLDCSKI-PSLPDVTFVINGRNFNISSQY 280 (330)
T ss_dssp -----TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEE-----EECSSCEEEEECGGGG-GGSCCEEEEETTEEEEECHHH
T ss_pred -----CCcEEEEecCCccccCCHHHHHHHHHHhCCcc-----cCCCceEEEEEECCCc-cccCcEEEEECCEEEEECHHH
Confidence 24689999999999999999999888764321 1111 23 4789976 678999999999999999999
Q ss_pred eEEEecCCCeEEEE-EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 378 LLIHSTAGSITCLA-MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 378 y~~~~~~~~~~C~~-~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
|+++. +..|+. ++..... +.||||++|||++|+|||++++|||||+++
T Consensus 281 y~~~~---~~~C~~~i~~~~~~---~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 281 YIQQN---GNLCYSGFQPCGHS---DHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp HEEEE---TTEEEESEEEETTC---SSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hcccC---CCcEEEEEEeCCCC---CeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99987 348985 6665322 479999999999999999999999999874
No 24
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=7.7e-56 Score=438.41 Aligned_cols=305 Identities=20% Similarity=0.313 Sum_probs=244.5
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCceeEEe
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNLT 172 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~~~ 172 (433)
+..|+++|.||||+|+++|+|||||+++||+|..|..| ++ |||++|+||+.. +|.|.+.
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~--~~~f~~~~SsT~~~~------------------~~~~~i~ 71 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI--DTYFDTERSSTYRSK------------------GFDVTVK 71 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB--SCCCCGGGCTTCEEE------------------EEEEEEE
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc--ccCcccccCccceeC------------------CceEEEE
Confidence 56799999999999999999999999999999988765 45 999999999997 6899999
Q ss_pred cCCCceEEeEEEEEEEecCcccC--ceEEEeeeccCCCC---CCCCeEeecCCCCCch-----------hhhhccccCCc
Q 039412 173 YGSSTIAANLSQDTISLATDIVP--GYTFGCIQKATGNS---VPPQGLLGLGRGSLSL-----------LAQTQNLYQST 236 (433)
Q Consensus 173 Y~~g~~~G~~~~D~v~ig~~~~~--~~~fg~~~~~~~~~---~~~~GilGLg~~~~s~-----------~~q~~~i~~~~ 236 (433)
|++|++.|.+++|+|+|++.... .+.|+++....+.+ ...+||||||++.++. +.+++.+ +++
T Consensus 72 Yg~Gs~~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~ 150 (383)
T 2ewy_A 72 YTQGSWTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNV 150 (383)
T ss_dssp CSSCEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSC
T ss_pred ECCcEEEEEEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-Ccc
Confidence 99999999999999999864322 36788877655443 3679999999987653 2234566 789
Q ss_pred eEEecCCC-----CCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCC
Q 039412 237 FSYCLPSF-----KALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGA 308 (433)
Q Consensus 237 Fs~~l~~~-----~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~ 308 (433)
||+||.+. ......|.|+|||+| +.|++.|+|+.. ..+|.|.+++|+|+++.+.++...+. ..
T Consensus 151 FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~~~~~-----~~ 221 (383)
T 2ewy_A 151 FSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE----EWYYQIEILKLEIGGQSLNLDCREYN-----AD 221 (383)
T ss_dssp EEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS----BTTBBCCEEEEEETTEECCCCTTTTT-----SS
T ss_pred eEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC----CceEEEEEEEEEECCEEccccccccC-----Cc
Confidence 99999642 123457999999998 679999999987 57999999999999999876544432 46
Q ss_pred ceEEccccceeeechHHHHHHHHHHHHHhcCCccccC--CCCccCCCCCC----CCCceEEEEEeCc------EEEeCCC
Q 039412 309 GTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTS--LGGFDTCYSVP----IVAPTITLMFSGM------NVTLPQD 376 (433)
Q Consensus 309 ~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~C~~~~----~~~P~i~f~f~g~------~~~l~~~ 376 (433)
.+||||||++++||++++++|++++.+.......... ....++|+... ..+|+|+|+|+|. +++|+++
T Consensus 222 ~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~ 301 (383)
T 2ewy_A 222 KAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQ 301 (383)
T ss_dssp CEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHH
T ss_pred cEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChH
Confidence 8999999999999999999999999876542100001 12247998752 2589999999985 7999999
Q ss_pred CeEEEecC--CCeEEEE--EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 377 NLLIHSTA--GSITCLA--MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 377 ~y~~~~~~--~~~~C~~--~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
+|+++..+ ++..|++ +.+.. +.||||+.|||++|+|||++++|||||+++|+
T Consensus 302 ~yi~~~~~~~~~~~C~~~~i~~~~-----~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 302 LYIQPMMGAGLNYECYRFGISPST-----NALVIGATVMEGFYVIFDRAQKRVGFAASPCA 357 (383)
T ss_dssp HHEEEECCCTTCSEEEEESEEEES-----SCEEECHHHHTTEEEEEETTTTEEEEEECTTC
T ss_pred HheeecccCCCCceeEEEEecCCC-----CcEEEChHHhCCeeEEEECCCCeEEEEeccCC
Confidence 99987642 2468986 34322 35999999999999999999999999999994
No 25
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.2e-56 Score=447.36 Aligned_cols=301 Identities=22% Similarity=0.294 Sum_probs=254.0
Q ss_pred ceeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC--CCCCCC-CCCCCCCccccccCCCcccCC
Q 039412 80 KSVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV--GCSSTV-FNSAQSTTFKNLGCQAAQCKQ 156 (433)
Q Consensus 80 ~~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~--~C~~~~-y~~~~Sst~~~~~c~~~~C~~ 156 (433)
...+||.+. .+.+|+++|+||||||+++|++||||+++||+|..|. .|..++ |||++|+|++..
T Consensus 126 ~~~~pL~n~----~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~--------- 192 (451)
T 3qvc_A 126 FDNVELKDL----ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKD--------- 192 (451)
T ss_dssp -CCCCGGGG----BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEE---------
T ss_pred CCccceeec----CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccC---------
Confidence 456777653 3788999999999999999999999999999999995 798888 999999999987
Q ss_pred CCCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeec----cCCC-CCCCCeEeecCCCCCch------
Q 039412 157 VPNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQK----ATGN-SVPPQGLLGLGRGSLSL------ 225 (433)
Q Consensus 157 ~~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~----~~~~-~~~~~GilGLg~~~~s~------ 225 (433)
++.|.+.|++|++.|.+++|+|++++.+++ +.|||++. ..+. ....+||||||++..+.
T Consensus 193 ---------~~~f~i~YgdGs~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~f~~~~~dGILGLg~~~~s~~~~~~~ 262 (451)
T 3qvc_A 193 ---------DTPVKLTSKAGTISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPFYSESDVDGVFGLGWKDLSIGSIDPY 262 (451)
T ss_dssp ---------EEEEEEECSSEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTHHHHSCCCEEEECSSBCSSSSCCCCH
T ss_pred ---------CCEEEEEECCCEEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCCccCCCCCEEEecCCCcccccCCCCH
Confidence 789999999988999999999999999999 99999998 5441 13689999999987653
Q ss_pred ---hhhhccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCC
Q 039412 226 ---LAQTQNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGA 299 (433)
Q Consensus 226 ---~~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 299 (433)
+.+++.|.+++||+||.+. ....|.|+|||+| +.|++.|+|+.. ..+|.|+++ |+|+++ ..
T Consensus 263 ~~~L~~qg~I~~~~FS~~L~~~--~~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~l~-I~Vgg~-~~----- 329 (451)
T 3qvc_A 263 IVELKTQNKIEQAVYSIYLPPE--NKNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVDLD-VHFGNV-SS----- 329 (451)
T ss_dssp HHHHHHTTSSSSSEEEEECCTT--CTTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEEEE-EEETTE-EE-----
T ss_pred HHHHHHcCCCCCCEEEEEEcCC--CCCCCEEEECCcchhhcCCceEEEEccc----CCeeEEEEE-EEECCc-cC-----
Confidence 3346889999999999984 3458999999999 569999999986 689999999 999998 11
Q ss_pred cccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCe
Q 039412 300 LQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNL 378 (433)
Q Consensus 300 ~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y 378 (433)
.+..+||||||+++++|++++++|.+++. +.. ....+.+ ++|. . ..+|+|+|+|+|.+++||+++|
T Consensus 330 ------~~~~aiiDSGTt~i~lP~~~~~~i~~~i~----a~~-~~~~g~y~v~C~-~-~~~P~itf~fgg~~i~lp~~~y 396 (451)
T 3qvc_A 330 ------KKANVILDSATSVITVPTEFFNQFVESAS----VFK-VPFLSLYVTTCG-N-TKLPTLEYRSPNKVYTLEPKQY 396 (451)
T ss_dssp ------EEEEEEECTTBSSEEECHHHHHHHHTTTT----CEE-CTTSSCEEEETT-C-TTCCCEEEEETTEEEEECHHHH
T ss_pred ------CCceEEEeCCCccccCCHHHHHHHHHHcC----Cee-cCCCCeEEeeCC-c-CcCCcEEEEECCEEEEEcHHHh
Confidence 24689999999999999999999776653 321 2223445 8999 5 7889999999999999999999
Q ss_pred EEEecC-CCeEEEE-EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 379 LIHSTA-GSITCLA-MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 379 ~~~~~~-~~~~C~~-~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
+++... ++..|+. +++.... .+.||||++|||++|+|||++++|||||+++
T Consensus 397 i~~~~~~~~~~C~~~i~~~~~~--~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 397 LEPLENIFSALCMLNIVPIDLE--KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEECTTTSTTEEEECEEECCCS--TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred eeecccCCCCeEEEEEEeCCCC--CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 998653 3468985 6665421 2579999999999999999999999999875
No 26
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=7.3e-56 Score=447.50 Aligned_cols=307 Identities=20% Similarity=0.292 Sum_probs=249.4
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCceeEEe
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNLT 172 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~~~ 172 (433)
+..|+++|.||||+|+++|+|||||+++||+|..| |..++ |||++|+||+.. +|.|.+.
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~~~~y~~~~SsT~~~~------------------~~~~~i~ 132 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLHRYYQRQLSSTYRDL------------------RKGVYVP 132 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCSCCCCGGGCTTCEEE------------------EEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cccCCcccCCCCCCcccC------------------CccEEEE
Confidence 56899999999999999999999999999999988 66677 999999999998 7999999
Q ss_pred cCCCceEEeEEEEEEEecC-cccC-ceEEEeeeccCCCC---CCCCeEeecCCCCCchh-----------hhhccccCCc
Q 039412 173 YGSSTIAANLSQDTISLAT-DIVP-GYTFGCIQKATGNS---VPPQGLLGLGRGSLSLL-----------AQTQNLYQST 236 (433)
Q Consensus 173 Y~~g~~~G~~~~D~v~ig~-~~~~-~~~fg~~~~~~~~~---~~~~GilGLg~~~~s~~-----------~q~~~i~~~~ 236 (433)
|++|++.|.+++|+|+|++ ..+. .+.|+++....+.+ ...+||||||++.++.. .+++.|. ++
T Consensus 133 Yg~Gs~~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~ 211 (455)
T 3lpj_A 133 YTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NL 211 (455)
T ss_dssp CSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SC
T ss_pred eCCeEEEEEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ce
Confidence 9999999999999999984 3332 36788888765543 46899999999876532 2346775 89
Q ss_pred eEEecCCCC--------CCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCC
Q 039412 237 FSYCLPSFK--------ALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPT 305 (433)
Q Consensus 237 Fs~~l~~~~--------~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~ 305 (433)
||+||.+.. .....|.|+|||+| +.|++.|+|+.. ..+|.|.+++|+|+++.+.++...+
T Consensus 212 FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~~~~----- 282 (455)
T 3lpj_A 212 FSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEY----- 282 (455)
T ss_dssp EEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCGGGG-----
T ss_pred eEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC----CceeEEEEeEEEECCEEcccccccc-----
Confidence 999997631 03457999999999 569999999987 5899999999999999987654333
Q ss_pred CCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccC--CCCccCCCCCCC----CCceEEEEEeCc------EEEe
Q 039412 306 TGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTS--LGGFDTCYSVPI----VAPTITLMFSGM------NVTL 373 (433)
Q Consensus 306 ~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~C~~~~~----~~P~i~f~f~g~------~~~l 373 (433)
....+||||||++++||++++++|++++.+.......... .+..++|+.... .+|+|+|+|+|. +++|
T Consensus 283 ~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 362 (455)
T 3lpj_A 283 NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 362 (455)
T ss_dssp GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEE
Confidence 1468999999999999999999999999887542211111 223489998621 389999999996 4999
Q ss_pred CCCCeEEEecCC---CeEEEEEEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 374 PQDNLLIHSTAG---SITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 374 ~~~~y~~~~~~~---~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
++++|+++.... ...|+++...... +.||||+.|||++|+|||++++|||||+++|+
T Consensus 363 ~~~~yi~~~~~~~~~~~~C~~f~~~~~~---~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 422 (455)
T 3lpj_A 363 LPQQYLRPVEDVATSQDDCYKFAISQSS---TGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 422 (455)
T ss_dssp CHHHHEEEECCTTCCSCEEEEECEEEES---SCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred CHHHheEeccCCCCCCceEEEEeccCCC---CcEEEChHHhCCeEEEEECCCCEEEEEecccc
Confidence 999999987642 2589874322222 36999999999999999999999999999995
No 27
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=9.4e-56 Score=440.45 Aligned_cols=307 Identities=20% Similarity=0.288 Sum_probs=245.6
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCceeEEe
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNLT 172 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~~~ 172 (433)
+..|+++|.||||+|+++|+|||||+++||+|..| |..++ |||++|+||+.. +|.|.+.
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~~~~y~~~~SsT~~~~------------------~~~~~i~ 86 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLHRYYQRQLSSTYRDL------------------RKGVYVP 86 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCSCCCCGGGCTTCEEE------------------EEEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--CcccCCcCcccCcccccC------------------CCEEEEE
Confidence 46899999999999999999999999999999988 66677 999999999997 7999999
Q ss_pred cCCCceEEeEEEEEEEecC-cccCc-eEEEeeeccCCCC---CCCCeEeecCCCCCchh-----------hhhccccCCc
Q 039412 173 YGSSTIAANLSQDTISLAT-DIVPG-YTFGCIQKATGNS---VPPQGLLGLGRGSLSLL-----------AQTQNLYQST 236 (433)
Q Consensus 173 Y~~g~~~G~~~~D~v~ig~-~~~~~-~~fg~~~~~~~~~---~~~~GilGLg~~~~s~~-----------~q~~~i~~~~ 236 (433)
|++|++.|.+++|+|+|++ ..+.. +.|+++....+.+ ...+||||||++..+.. .+++.|. ++
T Consensus 87 Yg~Gs~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~ 165 (402)
T 3vf3_A 87 YTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NL 165 (402)
T ss_dssp CSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SC
T ss_pred ECcEEEEEEEEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cc
Confidence 9999999999999999984 44443 4578877665543 46899999999876532 2346775 89
Q ss_pred eEEecCCCC---C-----CCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCC
Q 039412 237 FSYCLPSFK---A-----LSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPT 305 (433)
Q Consensus 237 Fs~~l~~~~---~-----~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~ 305 (433)
||+||.+.. + ....|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+.++...+
T Consensus 166 FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~~~~----- 236 (402)
T 3vf3_A 166 FSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEY----- 236 (402)
T ss_dssp EEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS----BTTBEECEEEEEETTEECCCCGGGG-----
T ss_pred eEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc----CcEEEEEEeEEEECCEEeccccccc-----
Confidence 999997521 0 3457999999999 568999999987 5899999999999999987654333
Q ss_pred CCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccC--CCCccCCCCCC----CCCceEEEEEeCc------EEEe
Q 039412 306 TGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTS--LGGFDTCYSVP----IVAPTITLMFSGM------NVTL 373 (433)
Q Consensus 306 ~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~C~~~~----~~~P~i~f~f~g~------~~~l 373 (433)
....+||||||++++||++++++|++++.+.......... .+..++|+... ..+|+|+|+|+|. +++|
T Consensus 237 ~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 316 (402)
T 3vf3_A 237 NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 316 (402)
T ss_dssp GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEE
Confidence 1468999999999999999999999999887542111111 12348999762 1689999999986 4999
Q ss_pred CCCCeEEEecCC---CeEEEEEEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 374 PQDNLLIHSTAG---SITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 374 ~~~~y~~~~~~~---~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
++++|+++.... ...|+++...... +.||||++|||++|+|||++++|||||+++|+
T Consensus 317 ~~~~yi~~~~~~~~~~~~C~~~~~~~~~---~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 376 (402)
T 3vf3_A 317 LPQQYLRPVEDVATSQDDCYKFAISQSS---TGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 376 (402)
T ss_dssp CHHHHEEECCCGGGTTEEEEEECEEEES---SCEEECHHHHTTEEEEEEGGGTEEEEEEETTC
T ss_pred CHHHheehhccCCCCCceEEEEeccCCC---CcEEEChHHhCCeEEEEECCCCEEEEEecccC
Confidence 999999986542 2589863222112 36999999999999999999999999999996
No 28
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.2e-55 Score=436.74 Aligned_cols=305 Identities=20% Similarity=0.300 Sum_probs=245.5
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCceeEEe
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNLT 172 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~~~ 172 (433)
+..|+++|.||||+|+++|+|||||+++||+|..|..| ++ |||++|+||+.. +|.|.+.
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~--~~~y~~~~SsT~~~~------------------~~~~~i~ 79 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL--HRYYQRQLSSTYRDL------------------RKGVYVP 79 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC--SCCCCGGGCTTCEEE------------------EEEEEEE
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc--cCCcCcccCCCceeC------------------CceEEEE
Confidence 56899999999999999999999999999999888654 56 999999999997 6899999
Q ss_pred cCCCceEEeEEEEEEEec-CcccC-ceEEEeeeccCCCC---CCCCeEeecCCCCCch-----------hhhhccccCCc
Q 039412 173 YGSSTIAANLSQDTISLA-TDIVP-GYTFGCIQKATGNS---VPPQGLLGLGRGSLSL-----------LAQTQNLYQST 236 (433)
Q Consensus 173 Y~~g~~~G~~~~D~v~ig-~~~~~-~~~fg~~~~~~~~~---~~~~GilGLg~~~~s~-----------~~q~~~i~~~~ 236 (433)
|++|++.|.+++|+|+|+ +..++ .+.|+++....+.+ ...+||||||++.++. +.+++.+. ++
T Consensus 80 Yg~Gs~~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~ 158 (395)
T 2qp8_A 80 YTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NL 158 (395)
T ss_dssp CSSCEEEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SC
T ss_pred ECCcEEEEEEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ce
Confidence 999989999999999998 55544 36788877654443 3689999999987643 22346665 89
Q ss_pred eEEecCCCC--------CCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCC
Q 039412 237 FSYCLPSFK--------ALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPT 305 (433)
Q Consensus 237 Fs~~l~~~~--------~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~ 305 (433)
||+||.+.. .....|.|+|||+| +.|++.|+|+.. ..+|.|.+++|+|+++.+.++...+.
T Consensus 159 FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~~~~~---- 230 (395)
T 2qp8_A 159 FSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEYN---- 230 (395)
T ss_dssp EEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCGGGGG----
T ss_pred EEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC----CceEEEEEEEEEECCEEcccCccccC----
Confidence 999997631 01357999999999 568999999987 57999999999999998876544332
Q ss_pred CCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccC--CCCccCCCCCC----CCCceEEEEEeCc------EEEe
Q 039412 306 TGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTS--LGGFDTCYSVP----IVAPTITLMFSGM------NVTL 373 (433)
Q Consensus 306 ~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~C~~~~----~~~P~i~f~f~g~------~~~l 373 (433)
...+||||||++++||++++++|++++.+.......... .+..++|+... ..+|+|+|+|+|. +++|
T Consensus 231 -~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 309 (395)
T 2qp8_A 231 -YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 309 (395)
T ss_dssp -SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred -CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEEEE
Confidence 368999999999999999999999999887542210001 12237998752 1589999999985 6999
Q ss_pred CCCCeEEEecC---CCeEEEE--EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 374 PQDNLLIHSTA---GSITCLA--MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 374 ~~~~y~~~~~~---~~~~C~~--~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
++++|+++... +...|++ +.... +.||||+.|||++|+|||++++|||||+++|+
T Consensus 310 ~p~~yi~~~~~~~~~~~~C~~~~i~~~~-----~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 369 (395)
T 2qp8_A 310 LPQQYLRPVEDVATSQDDCYKFAISQSS-----TGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 369 (395)
T ss_dssp CHHHHEEEECCTTCCSCEEEEECEEEES-----SCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred CHHHhEeecccCCCCCceEEEEEecCCC-----CcEEEChHHhCCeeEEEECCCCEEEEEeccCC
Confidence 99999987653 2358974 44322 36999999999999999999999999999995
No 29
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.7e-55 Score=424.67 Aligned_cols=291 Identities=18% Similarity=0.329 Sum_probs=241.4
Q ss_pred CCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCC--CCCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCcee
Q 039412 93 QSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGC--SSTV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAF 169 (433)
Q Consensus 93 ~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C--~~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~ 169 (433)
.+..|+++|.|| +|+++|+|||||+++||+|..|..| ..++ |||++|+ ++.. +|.|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~------------------~~~~ 70 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLS------------------GYSW 70 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECT------------------TCBE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccC------------------CCEE
Confidence 378999999999 9999999999999999999999865 5677 9999998 5533 7899
Q ss_pred EEecCCCc-eEEeEEEEEEEecCcccCceEEEeeeccCCCC---CCCCeEeecCCCCCch---------hhhh-ccccCC
Q 039412 170 NLTYGSST-IAANLSQDTISLATDIVPGYTFGCIQKATGNS---VPPQGLLGLGRGSLSL---------LAQT-QNLYQS 235 (433)
Q Consensus 170 ~~~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~---~~~~GilGLg~~~~s~---------~~q~-~~i~~~ 235 (433)
.+.|++|+ +.|.+++|+|+|++.+++++.|||++...+.+ ...+||||||++..+. ..|+ ..+.++
T Consensus 71 ~i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~i~~~ 150 (325)
T 1ibq_A 71 DISYGDGSSASGDVYRDTVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQLDSP 150 (325)
T ss_dssp EEECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGGSSSS
T ss_pred EEEeCCCCEEEEEEEEeEEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHhcCCc
Confidence 99999987 78999999999999999999999999875432 4789999999987653 2332 237889
Q ss_pred ceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEE
Q 039412 236 TFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTII 312 (433)
Q Consensus 236 ~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~ii 312 (433)
+||+||.+ ...|.|+|||+| +.|++.|+|+... ..+|.|++++|+|+++.+. ..+..+||
T Consensus 151 ~FS~~l~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~----------~~~~~aii 213 (325)
T 1ibq_A 151 LFAVQLKH----DAPGVYDFGYIDDSKYTGSITYTDADSS---QGYWGFSTDGYSIGDGSSS----------SSGFSAIA 213 (325)
T ss_dssp EEEEEEET----TEEEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEECEEEETTSCCB----------SCCEEEEE
T ss_pred EEEEEecC----CCCceEEECCcChhhccCceEEEEcCCC---CceEEEEECcEEECCeecc----------CCCceEEE
Confidence 99999987 248999999999 6799999999753 5789999999999997653 12468999
Q ss_pred ccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEecC-CCeEEE
Q 039412 313 DSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHSTA-GSITCL 390 (433)
Q Consensus 313 DSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~-~~~~C~ 390 (433)
||||++++||++++++|++++. ++. .....+.+ ++|+ ..+|+|+|+|+|++++||+++|+++..+ +...|+
T Consensus 214 DSGTt~~~lP~~~~~~i~~~i~---~a~-~~~~~g~~~~~C~---~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~ 286 (325)
T 1ibq_A 214 DTGTTLILLDDEIVSAYYEQVS---GAQ-ESYEAGGYVFSCS---TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCY 286 (325)
T ss_dssp CTTCCSEEECHHHHHHHHTTST---TCB-CCSSSSSCEEETT---CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEE
T ss_pred eCCCCcEeCCHHHHHHHHHhCC---Cce-EcCcCCeEEEEcC---CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEE
Confidence 9999999999999999776652 222 12223345 8998 4689999999999999999999987643 347998
Q ss_pred E-EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 391 A-MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 391 ~-~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
+ ++..... +.||||+.|||++|+|||++++|||||+++
T Consensus 287 ~~i~~~~~~---~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 287 GGIQSNSGL---GLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp ESEEECTTT---CSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEcCCCC---CceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 7 6654322 479999999999999999999999999874
No 30
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.8e-55 Score=427.45 Aligned_cols=302 Identities=19% Similarity=0.309 Sum_probs=246.3
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCCCCCCCCCccccccCCCcccCCCCCC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVPNP 160 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~y~~~~Sst~~~~~c~~~~C~~~~~~ 160 (433)
..+||.+. +..|+++|.||||+|+++|+|||||+++||+|.. .|||++|+++.
T Consensus 3 ~~~~l~n~-----~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~-------~y~~s~Ss~~~--------------- 55 (340)
T 1wkr_A 3 GSVPATNQ-----LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGADK-------SYVKTSTSSAT--------------- 55 (340)
T ss_dssp EEEEEEEC-----SSCEEEEEEETTTTEEEEEEEETTCCCCEECSSS-------CCCCCTTCEEE---------------
T ss_pred ccEeeecc-----CcEEEEEEEECCCCcEEEEEEeCCChhheecCCC-------ccCCcCCcccc---------------
Confidence 45788865 6799999999999999999999999999998752 29999887653
Q ss_pred CCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCCCCCCCeEeecCCCCCch---------------
Q 039412 161 TCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQGLLGLGRGSLSL--------------- 225 (433)
Q Consensus 161 ~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~GilGLg~~~~s~--------------- 225 (433)
+|.|.+.|++|++.|.+++|+|+|++.+++++.|||++...+ +...+||||||++..+.
T Consensus 56 -----~~~~~i~Yg~Gs~~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~-~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~ 129 (340)
T 1wkr_A 56 -----SDKVSVTYGSGSFSGTEYTDTVTLGSLTIPKQSIGVASRDSG-FDGVDGILGVGPVDLTVGTLSPHTSTSIPTVT 129 (340)
T ss_dssp -----EEEEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEES-CTTCSEEEECSCGGGGTTSEESCTTCCCCCHH
T ss_pred -----CceEEEEECCcEEEEEEEEEEEEECCEEEcceEEEEEEccCC-CcCCCcEEECCccccccccccccccccCCCHH
Confidence 589999999988999999999999999999999999998765 45789999999987654
Q ss_pred --hhhhccccCCceEEecCCCC-CCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECC-EEeecCCC
Q 039412 226 --LAQTQNLYQSTFSYCLPSFK-ALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGR-RVVDIPPG 298 (433)
Q Consensus 226 --~~q~~~i~~~~Fs~~l~~~~-~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~-~~~~~~~~ 298 (433)
+.+++.|.+++||+||.+.. .....|.|+|||+| +.|++.|+|+..++....+|.|. ++|+|++ +.+..
T Consensus 130 ~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~~--- 205 (340)
T 1wkr_A 130 DNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSILS--- 205 (340)
T ss_dssp HHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEEE---
T ss_pred HHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEccC---
Confidence 12357788999999998742 13457999999999 67999999998864435799999 9999998 77642
Q ss_pred CcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCC
Q 039412 299 ALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDN 377 (433)
Q Consensus 299 ~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~ 377 (433)
+..+||||||++++||++++++|.+++.+.. ....+.+ ++|... ..+|+|+|+|+|.+++|++++
T Consensus 206 --------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~-----~~~~g~~~~~C~~~-~~~p~i~f~f~g~~~~i~~~~ 271 (340)
T 1wkr_A 206 --------STAGIVDTGTTLTLIASDAFAKYKKATGAVA-----DNNTGLLRLTTAQY-ANLQSLFFTIGGQTFELTANA 271 (340)
T ss_dssp --------EEEEEECTTBCSEEECHHHHHHHHHHHTCEE-----CTTTSSEEECHHHH-HTCCCEEEEETTEEEEECTGG
T ss_pred --------CCeEEEeCCcccccCCHHHHHHHHHhhCCEE-----cCCCCeEEeecccc-ccCCcEEEEECCEEEEEcHHH
Confidence 2589999999999999999999877654322 1223344 899876 678999999999999999999
Q ss_pred eEEEecC------CCeEEE-EEEecCCC-CCCceeEechhhhceeEEEEECCCCEEEEecCCCC
Q 039412 378 LLIHSTA------GSITCL-AMAAAPDN-VNSVLNVIANMQQQNHRILYDVPNSRLGVARELCT 433 (433)
Q Consensus 378 y~~~~~~------~~~~C~-~~~~~~~~-~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~C~ 433 (433)
|+++... ....|+ .+...... ..+..||||++|||++|+|||++++|||||+++|+
T Consensus 272 yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 335 (340)
T 1wkr_A 272 QIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFT 335 (340)
T ss_dssp GBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTT
T ss_pred hccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCC
Confidence 9986531 124686 46653321 11246999999999999999999999999999985
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.8e-55 Score=425.53 Aligned_cols=288 Identities=20% Similarity=0.348 Sum_probs=239.6
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCC--CCCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCceeE
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGC--SSTV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFN 170 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C--~~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~ 170 (433)
+..|+++|.|| +|+++|+|||||+++||+|..|..| ..++ |||++|+ ++.. +|.|.
T Consensus 14 ~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~------------------~~~~~ 72 (323)
T 1bxo_A 14 DEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELS------------------GYTWS 72 (323)
T ss_dssp GSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEE------------------EEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccC------------------CCeEE
Confidence 68999999999 9999999999999999999999865 6677 9999998 6543 69999
Q ss_pred EecCCCc-eEEeEEEEEEEecCcccCceEEEeeeccCCCC---CCCCeEeecCCCCCchh---------hhh-ccccCCc
Q 039412 171 LTYGSST-IAANLSQDTISLATDIVPGYTFGCIQKATGNS---VPPQGLLGLGRGSLSLL---------AQT-QNLYQST 236 (433)
Q Consensus 171 ~~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~---~~~~GilGLg~~~~s~~---------~q~-~~i~~~~ 236 (433)
+.|++|+ +.|.+++|+|+|++.+++++.|||++...+.+ ...+||||||++..+.. .++ ..+.+++
T Consensus 73 i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~~~ 152 (323)
T 1bxo_A 73 ISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQPL 152 (323)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGGBSSSE
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHhcCCcE
Confidence 9999977 78999999999999999999999999875432 47899999999866542 221 2378899
Q ss_pred eEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEc
Q 039412 237 FSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIID 313 (433)
Q Consensus 237 Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiD 313 (433)
||+||.+ ...|.|+|||+| +.|++.|+|+... ..+|.|++++|+|++ ... .+..+|||
T Consensus 153 FS~~L~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~-----------~~~~aiiD 213 (323)
T 1bxo_A 153 FAVALKH----QQPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS-QSG-----------DGFSGIAD 213 (323)
T ss_dssp EEEECCS----SSCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT-EEE-----------EEEEEEEC
T ss_pred EEEEEeC----CCCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC-ccC-----------CCceEEEe
Confidence 9999987 247999999999 6799999999753 578999999999999 221 24689999
Q ss_pred cccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEecCCCeEEEE-
Q 039412 314 SGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHSTAGSITCLA- 391 (433)
Q Consensus 314 SGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~~C~~- 391 (433)
|||+++++|++++++|.+++. ++. .....+.+ ++|+ ..+|+|+|+|+|++++||+++|+++..+++..|++
T Consensus 214 SGTs~~~lP~~~~~~l~~~i~---~a~-~~~~~g~~~~~C~---~~~P~i~f~fgg~~~~l~~~~~~~~~~~~~~~C~~~ 286 (323)
T 1bxo_A 214 TGTTLLLLDDSVVSQYYSQVS---GAQ-QDSNAGGYVFDCS---TNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGG 286 (323)
T ss_dssp TTCSSEEECHHHHHHHHTTST---TCE-EETTTTEEEECTT---CCCCCEEEEETTEEEEECHHHHEEEECSSSSCEEES
T ss_pred CCCCceeCCHHHHHHHHHhCC---Cce-EcCcCCEEEEECC---CCCceEEEEECCEEEEECHHHeEEeccCCCCeEEEE
Confidence 999999999999999776652 121 12223344 8999 46899999999999999999999876544468987
Q ss_pred EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 392 MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 392 ~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
++..... +.||||++|||++|+|||++++|||||++.
T Consensus 287 i~~~~~~---~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 287 IQSNSGI---GFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp EEECTTC---SSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECCCCC---CcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 6665422 479999999999999999999999999874
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.8e-55 Score=424.06 Aligned_cols=288 Identities=17% Similarity=0.298 Sum_probs=239.3
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCC--CCCC-CCCCCCCccccccCCCcccCCCCCCCCCCCCceeE
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGC--SSTV-FNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFN 170 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C--~~~~-y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~ 170 (433)
+.+|+++|.|| +|+++|+|||||+++||+|..|..| ..++ |||++|+ ++.. +|.|.
T Consensus 14 ~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~------------------~~~~~ 72 (323)
T 1izd_A 14 DEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKID------------------GATWS 72 (323)
T ss_dssp GCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEE------------------EEEEE
T ss_pred CCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccC------------------CCeEE
Confidence 68999999999 8999999999999999999999865 6677 9999999 6543 68999
Q ss_pred EecCCCc-eEEeEEEEEEEecCcccCceEEEeeeccCCCC---CCCCeEeecCCCCCchh---------hhh-ccccCCc
Q 039412 171 LTYGSST-IAANLSQDTISLATDIVPGYTFGCIQKATGNS---VPPQGLLGLGRGSLSLL---------AQT-QNLYQST 236 (433)
Q Consensus 171 ~~Y~~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~---~~~~GilGLg~~~~s~~---------~q~-~~i~~~~ 236 (433)
+.|++|+ +.|.+++|+|+|++.+++++.|||++...+.+ ...+||||||++.++.. .++ ..+.+++
T Consensus 73 i~Yg~Gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~i~~~~ 152 (323)
T 1izd_A 73 ISYGDGSSASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSEPI 152 (323)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGGSSSSE
T ss_pred EEcCCCCeEEEEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHhccCcE
Confidence 9999987 78999999999999999999999999875432 47899999999876542 221 2378899
Q ss_pred eEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEc
Q 039412 237 FSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIID 313 (433)
Q Consensus 237 Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiD 313 (433)
||+||.+ ...|.|+|||+| +.|++.|+|+... ..+|.|++++|+|++ .+. ..+..+|||
T Consensus 153 FS~~L~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~----------~~~~~aiiD 214 (323)
T 1izd_A 153 FAVALKH----NAPGVYDFGYTDSSKYTGSITYTDVDNS---QGFWGFTADGYSIGS-DSS----------SDSITGIAD 214 (323)
T ss_dssp EEEECCT----TSCEEEEESSCCTTSEEEEEEEEECBCT---TSSCEEEESEEEETT-EEE----------CCCEEEEEC
T ss_pred EEEEccC----CCCCEEEECCcCccccccceEEEECCCC---CceEEEEECeEEECC-ccc----------CCCceEEEe
Confidence 9999987 247999999999 4589999999753 579999999999999 542 134689999
Q ss_pred cccceeeechHHHHHHHHHHHHHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEecCCCeEEEE-
Q 039412 314 SGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHSTAGSITCLA- 391 (433)
Q Consensus 314 SGt~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~~C~~- 391 (433)
|||+++++|++++++|.+++. ++. .....+.+ ++|+ ..+|+|+|+|+|++++||+++|+++..+ +..|++
T Consensus 215 SGTs~~~lp~~~~~~i~~~i~---ga~-~~~~~g~~~~~C~---~~~P~i~f~fgg~~~~i~~~~~~~~~~~-~~~C~~~ 286 (323)
T 1izd_A 215 TGTTLLLLDDSIVDAYYEQVN---GAS-YDSSQGGYVFPSS---ASLPDFSVTIGDYTATVPGEYISFADVG-NGQTFGG 286 (323)
T ss_dssp TTCCSEEECHHHHHHHHTTST---TCE-EETTTTEEEEETT---CCCCCEEEEETTEEEEECHHHHEEEECS-TTEEEES
T ss_pred CCCcceeCCHHHHHHHHHhCC---CcE-EcCcCCEEEEECC---CCCceEEEEECCEEEecCHHHeEEecCC-CCeEEEE
Confidence 999999999999999776652 111 12223344 8998 4689999999999999999999987643 568987
Q ss_pred EEecCCCCCCceeEechhhhceeEEEEECCCCEEEEecCC
Q 039412 392 MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 392 ~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfa~~~ 431 (433)
++..... +.||||+.|||++|+|||++++|||||++.
T Consensus 287 i~~~~~~---~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 287 IQSNSGI---GFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEECTTT---SSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEcCCCC---CcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 7665422 479999999999999999999999999863
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=5.3e-54 Score=424.46 Aligned_cols=319 Identities=21% Similarity=0.407 Sum_probs=248.1
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCCCCCCCCCccccccCCCcccCCC---
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQV--- 157 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~y~~~~Sst~~~~~c~~~~C~~~--- 157 (433)
+.+||... ..+.+|+++|.|||| |+|||||+++||+|..| .+|+.++|+++.|...
T Consensus 3 ~~~pv~~~---~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~-------------~~~~~~~C~s~~C~~~~~~ 61 (381)
T 1t6e_X 3 VLAPVTKD---PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG-------------QPPAEIPCSSPTCLLANAY 61 (381)
T ss_dssp EEEEEEEC---TTTCCEEEEEETTEE-----EEEETTCCCEEECCCTT-------------CCCCCCBTTSHHHHHHHSS
T ss_pred eEEeEEec---CCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC-------------CCCCccCCCCchhccccCC
Confidence 45677632 347899999999998 99999999999998754 2345566666666432
Q ss_pred CCCCCC---------CCCc-eeEEecCCCce-EEeEEEEEEEecC----cccCce----EEEeeecc--CCCCCCCCeEe
Q 039412 158 PNPTCG---------GGAC-AFNLTYGSSTI-AANLSQDTISLAT----DIVPGY----TFGCIQKA--TGNSVPPQGLL 216 (433)
Q Consensus 158 ~~~~C~---------~~~~-~~~~~Y~~g~~-~G~~~~D~v~ig~----~~~~~~----~fg~~~~~--~~~~~~~~Gil 216 (433)
....|. +..| .|.+.|++|+. .|.+++|+|+|++ ..++++ .|||+..+ .+.+...+|||
T Consensus 62 ~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIl 141 (381)
T 1t6e_X 62 PAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVA 141 (381)
T ss_dssp CCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEE
T ss_pred CCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEE
Confidence 112343 2346 59999999775 7999999999984 456665 56999876 34456889999
Q ss_pred ecCCCCCchhhhhcc--ccCCceEEecCCCCCCCCcceEEecCCCC-----CCCeeeeeCccCCCCCcceEEEeeEEEEC
Q 039412 217 GLGRGSLSLLAQTQN--LYQSTFSYCLPSFKALSFSGSLRLGPIGQ-----PKRIKYTPLLKNPRRSSLYYVNLLAIRVG 289 (433)
Q Consensus 217 GLg~~~~s~~~q~~~--i~~~~Fs~~l~~~~~~~~~G~l~fGg~d~-----~~~l~~~p~~~~~~~~~~w~v~l~~i~v~ 289 (433)
|||++.++++.|+.. +.+++||+||.+. ..|+|+|||++. .+++.|+|++.++.. .+|.|+|++|+||
T Consensus 142 GLg~~~~s~~~ql~~~~~~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~~i~vg 216 (381)
T 1t6e_X 142 GLANSGLALPAQVASAQKVANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISARSIVVG 216 (381)
T ss_dssp ECSSSTTSHHHHHHHHHTCCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEEEEEET
T ss_pred EeCCCcchhHHHHhhhcccCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEEEEEEc
Confidence 999999999887532 4589999999872 589999999873 589999999986433 3567999999999
Q ss_pred CEEeecCCCCcccCCCCCCceEEccccceeeechHHHHHHHHHHHHHhcC-------Cccc-cCCCCccCCCCCC-----
Q 039412 290 RRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGS-------NLTV-TSLGGFDTCYSVP----- 356 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~~~~~~-------~~~~-~~~~~~~~C~~~~----- 356 (433)
++.+.++...|. ++.+||||||++++||+++|++|+++|.+++.. .... .....+.+|++..
T Consensus 217 ~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~ 291 (381)
T 1t6e_X 217 DTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNN 291 (381)
T ss_dssp TEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEE
T ss_pred CEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCccc
Confidence 999877755552 468999999999999999999999999887741 1111 2234558999752
Q ss_pred ---CCCceEEEEEeC-cEEEeCCCCeEEEecCCCeEEEEEEecCCC----CCCceeEechhhhceeEEEEECCCCEEEEe
Q 039412 357 ---IVAPTITLMFSG-MNVTLPQDNLLIHSTAGSITCLAMAAAPDN----VNSVLNVIANMQQQNHRILYDVPNSRLGVA 428 (433)
Q Consensus 357 ---~~~P~i~f~f~g-~~~~l~~~~y~~~~~~~~~~C~~~~~~~~~----~~~~~~ilG~~fl~~~y~vfD~~~~riGfa 428 (433)
..+|+|+|+|+| ++++|++++|+++... +..|++|+..... ...+.||||+.|||++|+|||++++|||||
T Consensus 292 ~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~-~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA 370 (381)
T 1t6e_X 292 LGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ-GTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370 (381)
T ss_dssp TTEECCCCEEEEETTSCEEEECHHHHEEEEET-TEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred ccCCcCCeEEEEECCCcEEEeCCCeEEEEcCC-CeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEe
Confidence 268999999985 8999999999998654 5789998876531 112479999999999999999999999999
Q ss_pred cCC
Q 039412 429 REL 431 (433)
Q Consensus 429 ~~~ 431 (433)
++.
T Consensus 371 ~~~ 373 (381)
T 1t6e_X 371 RLP 373 (381)
T ss_dssp ECC
T ss_pred ccc
Confidence 854
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-44 Score=331.67 Aligned_cols=218 Identities=22% Similarity=0.383 Sum_probs=188.1
Q ss_pred eeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC---CCCCCC-CCCCCCCccccccCCCcccCCC
Q 039412 82 VVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV---GCSSTV-FNSAQSTTFKNLGCQAAQCKQV 157 (433)
Q Consensus 82 ~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~---~C~~~~-y~~~~Sst~~~~~c~~~~C~~~ 157 (433)
.+||.+. .+.+|+++|.||||+|+++|+|||||+++||+|..|. .|..++ |||++|+||+..
T Consensus 4 ~~~l~n~----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~---------- 69 (239)
T 1b5f_A 4 VVALTND----RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKEN---------- 69 (239)
T ss_dssp EEEEEEE----TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEE----------
T ss_pred eeeeeec----CCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeC----------
Confidence 4677642 4789999999999999999999999999999999997 687777 999999999987
Q ss_pred CCCCCCCCCceeEEecCCCceEEeEEEEEEEecCcccCceEEEeeeccCCC---CCCCCeEeecCCCCCch-----hhhh
Q 039412 158 PNPTCGGGACAFNLTYGSSTIAANLSQDTISLATDIVPGYTFGCIQKATGN---SVPPQGLLGLGRGSLSL-----LAQT 229 (433)
Q Consensus 158 ~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~---~~~~~GilGLg~~~~s~-----~~q~ 229 (433)
+|.|.+.|++|++.|.+++|+|+|++..++++.|||+....+. ....+||||||++..+. +.++
T Consensus 70 --------~~~~~i~Yg~Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~q 141 (239)
T 1b5f_A 70 --------GTFGAIIYGTGSITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQ 141 (239)
T ss_dssp --------EEEEEEECSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHT
T ss_pred --------CcEEEEEECCCcEEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHC
Confidence 6899999999989999999999999999999999999986542 34789999999998873 2245
Q ss_pred ccccCCceEEecCCCCCCCCcceEEecCCC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCC
Q 039412 230 QNLYQSTFSYCLPSFKALSFSGSLRLGPIG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTT 306 (433)
Q Consensus 230 ~~i~~~~Fs~~l~~~~~~~~~G~l~fGg~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~ 306 (433)
+.+.+++||+||.+..+....|.|+|||+| +.|++.|+|+.. ..+|.|++++|+|+++.+.+. ..
T Consensus 142 g~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~--------~~ 209 (239)
T 1b5f_A 142 GLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTY----QYYWQFGIGDVLIGDKSTGFC--------AP 209 (239)
T ss_dssp TCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEE----ETTEEEEECCEEETTEECCTT--------TT
T ss_pred CCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEccc----CCeEEEEeeEEEECCEEeccc--------CC
Confidence 788899999999885333468999999999 568999999987 579999999999999987643 12
Q ss_pred CCceEEccccceeeechHHHHHHHHHH
Q 039412 307 GAGTIIDSGTVFTRLVAPAYTAVRDVF 333 (433)
Q Consensus 307 ~~~~iiDSGt~~~~lp~~~~~~l~~~l 333 (433)
+..+||||||++++||++++++|.+++
T Consensus 210 ~~~aiiDTGTt~~~lP~~~~~~i~~~i 236 (239)
T 1b5f_A 210 GCQAFADSGTSLLSGPTAIVTQINHAI 236 (239)
T ss_dssp CEEEEECTTCSSEEECHHHHHHHHHHT
T ss_pred CCEEEEecCcchhhCCHHHHHHHHHHh
Confidence 468999999999999999999987765
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=9.2e-39 Score=295.88 Aligned_cols=222 Identities=20% Similarity=0.285 Sum_probs=178.3
Q ss_pred cCcccCceEEEeeeccCCC-C--CCCCeEeecCCCCCchh---------hhhccccCCceEEecCCCCCCCCcceEEecC
Q 039412 190 ATDIVPGYTFGCIQKATGN-S--VPPQGLLGLGRGSLSLL---------AQTQNLYQSTFSYCLPSFKALSFSGSLRLGP 257 (433)
Q Consensus 190 g~~~~~~~~fg~~~~~~~~-~--~~~~GilGLg~~~~s~~---------~q~~~i~~~~Fs~~l~~~~~~~~~G~l~fGg 257 (433)
|+.+++++.|||++...+. + ...+||||||++..+.. .+++.|.+++||+||.+.......|.|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 4567899999999988653 3 37899999999876643 2457889999999998853233489999999
Q ss_pred CC---CCCCeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeechHHHHHHHHHHH
Q 039412 258 IG---QPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFR 334 (433)
Q Consensus 258 ~d---~~~~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~l~~~l~ 334 (433)
+| +.|++.|+|+.. ..+|.|++++|+|+++.+.. ..+..+||||||+++++|++++++|.+++.
T Consensus 81 ~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 147 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLC---------KEGCEAIVDTGTSLMVGPVDEVRELQKAIG 147 (241)
T ss_dssp CCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTSCEES---------TTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred cCHHHcCCceEEEECcc----ccEEEEEEeEEEECCeeEec---------cCCCEEEEECCCccccCCHHHHHHHHHHhC
Confidence 99 568999999986 58999999999999976431 135689999999999999999999887764
Q ss_pred HHhcCCccccCCCCc-cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEecC-CCeEEEE-EEecCCC-CCCceeEechhh
Q 039412 335 RRVGSNLTVTSLGGF-DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHSTA-GSITCLA-MAAAPDN-VNSVLNVIANMQ 410 (433)
Q Consensus 335 ~~~~~~~~~~~~~~~-~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~-~~~~C~~-~~~~~~~-~~~~~~ilG~~f 410 (433)
+ .. . ..+.+ ++|+.. ..+|+|+|+|+|++++|++++|+++... ++..|+. ++..... ...+.||||++|
T Consensus 148 ~----~~-~-~~g~~~~~C~~~-~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~f 220 (241)
T 1lya_B 148 A----VP-L-IQGEYMIPCEKV-STLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVF 220 (241)
T ss_dssp C----EE-E-ETTEEEEEGGGG-GGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHH
T ss_pred C----ee-c-cCCcEEEECCCC-ccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHH
Confidence 3 21 1 12334 899976 6889999999999999999999998753 2468985 7765321 112579999999
Q ss_pred hceeEEEEECCCCEEEEecCC
Q 039412 411 QQNHRILYDVPNSRLGVAREL 431 (433)
Q Consensus 411 l~~~y~vfD~~~~riGfa~~~ 431 (433)
||++|+|||++++|||||+++
T Consensus 221 l~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 221 IGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HTTEEEEEETTTTEEEEEEEC
T ss_pred hcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=4.2e-24 Score=167.30 Aligned_cols=89 Identities=30% Similarity=0.538 Sum_probs=80.4
Q ss_pred eeeecccCccccCCccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCC----CCCCCC-CCCCCCCccccccCCCcccC
Q 039412 81 SVVPIASGRQITQSPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCV----GCSSTV-FNSAQSTTFKNLGCQAAQCK 155 (433)
Q Consensus 81 ~~~p~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~----~C~~~~-y~~~~Sst~~~~~c~~~~C~ 155 (433)
..+||.+. .+..|+++|.||||+|++.|+|||||+++||+|..|. .|..++ |||++|+||+..
T Consensus 3 ~~~~l~n~----~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~-------- 70 (97)
T 1lya_A 3 IPEVLKNY----MDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKN-------- 70 (97)
T ss_dssp EEEEEEEE----TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEE--------
T ss_pred ceEeeEEC----CCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeC--------
Confidence 34677632 3789999999999999999999999999999999997 687787 999999999997
Q ss_pred CCCCCCCCCCCceeEEecCCCceEEeEEEEEEEecC
Q 039412 156 QVPNPTCGGGACAFNLTYGSSTIAANLSQDTISLAT 191 (433)
Q Consensus 156 ~~~~~~C~~~~~~~~~~Y~~g~~~G~~~~D~v~ig~ 191 (433)
+|.|.+.|++|++.|.+++|+|+|++
T Consensus 71 ----------~~~~~i~Yg~Gs~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 ----------GTSFDIHYGSGSLSGYLSQDTVSVPC 96 (97)
T ss_dssp ----------EEEEEEECSSCEEEEEEEEEEEEESC
T ss_pred ----------CCcEEEEECCcEEEEEEEEEEEEECC
Confidence 79999999998899999999999985
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.75 E-value=2.1e-18 Score=132.60 Aligned_cols=81 Identities=14% Similarity=0.324 Sum_probs=67.7
Q ss_pred cCCCCCCCCCceEEEEEeCcEEEeCCCCeEEEecC-CCeEEEE-EEecCCCCCCceeEechhhhceeEEEEECCCCEEEE
Q 039412 350 DTCYSVPIVAPTITLMFSGMNVTLPQDNLLIHSTA-GSITCLA-MAAAPDNVNSVLNVIANMQQQNHRILYDVPNSRLGV 427 (433)
Q Consensus 350 ~~C~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~-~~~~C~~-~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGf 427 (433)
++|... ..+|+|+|+|+|++++|++++|+++... +...|++ ++..+....++.||||++|||++|+|||++++||||
T Consensus 5 v~C~~~-~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGf 83 (87)
T 1b5f_B 5 VDCNTL-SSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGF 83 (87)
T ss_dssp ECGGGG-GGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEE
T ss_pred EECCCC-CcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEE
Confidence 899976 6899999999999999999999998654 2468985 776432112258999999999999999999999999
Q ss_pred ecCC
Q 039412 428 AREL 431 (433)
Q Consensus 428 a~~~ 431 (433)
|+++
T Consensus 84 A~~~ 87 (87)
T 1b5f_B 84 AEAA 87 (87)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 9874
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.021 Score=47.27 Aligned_cols=89 Identities=17% Similarity=0.256 Sum_probs=53.4
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCCCCCCCCCccccccCCCcccCCCCCCCCCCCCceeE-Ee
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFN-LT 172 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~-~~ 172 (433)
.+.+++++.|+ +++++++||||++.+.+.......+. ..+.. ...+. ..
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~~a~~lg---l~~~~-------------------------~~~~~~~a 73 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMSTRLAKKTG---LSRMI-------------------------DKRFIGEA 73 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHHHHHHHT---GGGGC-------------------------BCCCC---
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCHHHHHHcC---CCccC-------------------------CcceEEEE
Confidence 57799999999 89999999999999888632110000 00000 11111 12
Q ss_pred cCC--CceEEeEEEEEEEecCcccCceEEEeeeccCCCCCCCCeEeecC
Q 039412 173 YGS--STIAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQGLLGLG 219 (433)
Q Consensus 173 Y~~--g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~GilGLg 219 (433)
+|. ....|....+.+.+|+...+ ..|.+.. . +.+||||+.
T Consensus 74 ~g~g~~~~~~~~~~~~i~ig~~~~~-~~~~vl~--~----~~d~iLG~d 115 (148)
T 2i1a_A 74 RGVGTGKIIGRIHQAQVKIETQYIP-CSFTVLD--T----DIDVLIGLD 115 (148)
T ss_dssp --------CEEEEEEEEEETTEEEE-EEEEEEC--S----SCSEEECHH
T ss_pred ecCCCcccccEEEEEEEEECCEEec-eeEEEec--C----CCCeEecHH
Confidence 222 12346677789999987754 6666554 2 468999975
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=94.42 E-value=0.047 Score=45.18 Aligned_cols=27 Identities=11% Similarity=0.069 Sum_probs=24.7
Q ss_pred eeEechhhhceeEEEEECCCCEEEEec
Q 039412 403 LNVIANMQQQNHRILYDVPNSRLGVAR 429 (433)
Q Consensus 403 ~~ilG~~fl~~~y~vfD~~~~riGfa~ 429 (433)
..|||..||+.+-.+.|++++++-|..
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 489999999999999999999998864
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.17 E-value=0.11 Score=42.71 Aligned_cols=26 Identities=19% Similarity=0.103 Sum_probs=24.1
Q ss_pred eeEechhhhceeEEEEECCCCEEEEe
Q 039412 403 LNVIANMQQQNHRILYDVPNSRLGVA 428 (433)
Q Consensus 403 ~~ilG~~fl~~~y~vfD~~~~riGfa 428 (433)
..|||..||+++-+..|+.+++|-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 38999999999999999999999885
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.00 E-value=0.22 Score=41.08 Aligned_cols=90 Identities=16% Similarity=0.298 Sum_probs=55.2
Q ss_pred CccEEEEEEeCCCCceEEEEEecCCCceeeeCCCCCCCCCCCCCCCCCCccccccCCCcccCCCCCCCCCCCCceeE-Ee
Q 039412 94 SPTYIVRAKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFN-LT 172 (433)
Q Consensus 94 ~~~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~C~~C~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~-~~ 172 (433)
...|++++.|. +++++++||||++.+.+.......|.-... . ...+. ..
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~~A~rlGL~~~----------~------------------~~~~~~~a 71 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQACAERCNIMRL----------V------------------DRRWAGVA 71 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHHHHHHTTCGGG----------E------------------EGGGCEEC
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHHHHHHcCCccc----------c------------------CcceeEEE
Confidence 46789999998 899999999999999986532112210000 0 00111 11
Q ss_pred cCC--CceEEeEEEEEEEecCcccCceEEEeeeccCCCCCCCCeEeecC
Q 039412 173 YGS--STIAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQGLLGLG 219 (433)
Q Consensus 173 Y~~--g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~GilGLg 219 (433)
.+- ....|......+++++..++ ..|.+.... ..++|||+-
T Consensus 72 ~g~G~~~~~g~v~~~~I~Ig~~~~~-~~~~Vle~~-----~~d~LLGmD 114 (148)
T 3s8i_A 72 KGVGTQRIIGRVHLAQIQIEGDFLQ-CSFSILEDQ-----PMDMLLGLD 114 (148)
T ss_dssp CC---CEEEEEEEEEEEEETTEEEE-EEEEEETTC-----SSSEEECHH
T ss_pred EcCCccEEEEEEEEEEEEECCEEEE-EEEEEeCCC-----CcCeeccHH
Confidence 121 23457777788999987653 555544322 468999985
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=88.68 E-value=0.53 Score=35.72 Aligned_cols=28 Identities=29% Similarity=0.321 Sum_probs=24.8
Q ss_pred EEEEEeCCCCceEEEEEecCCCceeeeCCC
Q 039412 98 IVRAKIGTPAQTLLMAMDTSNDAAWVPCTG 127 (433)
Q Consensus 98 ~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~ 127 (433)
+++|.|| +|.+++++|||.+++-+....
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 5789999 899999999999999997543
No 43
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=87.76 E-value=0.53 Score=36.17 Aligned_cols=26 Identities=19% Similarity=0.172 Sum_probs=23.9
Q ss_pred EEEEEEeCCCCceEEEEEecCCCceeee
Q 039412 97 YIVRAKIGTPAQTLLMAMDTSNDAAWVP 124 (433)
Q Consensus 97 Y~~~i~iGtP~q~~~v~vDTGSs~~wv~ 124 (433)
=+++|.|| +|.+++++|||.+++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 36889999 899999999999999997
No 44
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=86.64 E-value=0.84 Score=34.58 Aligned_cols=28 Identities=29% Similarity=0.318 Sum_probs=24.7
Q ss_pred EEEEEeCCCCceEEEEEecCCCceeeeCCC
Q 039412 98 IVRAKIGTPAQTLLMAMDTSNDAAWVPCTG 127 (433)
Q Consensus 98 ~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~ 127 (433)
+++|.|| +|.+++++|||.+++-+....
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 5789999 999999999999999996543
No 45
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=82.77 E-value=1.1 Score=34.73 Aligned_cols=31 Identities=19% Similarity=0.387 Sum_probs=26.1
Q ss_pred EEEEEeC---CCCceEEEEEecCCCceeeeCCCC
Q 039412 98 IVRAKIG---TPAQTLLMAMDTSNDAAWVPCTGC 128 (433)
Q Consensus 98 ~~~i~iG---tP~q~~~v~vDTGSs~~wv~~~~C 128 (433)
.++|.|| +|+|.+..++|||.+++-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5667777 789999999999999999986643
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=80.07 E-value=1.6 Score=34.11 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=23.0
Q ss_pred EEEEEeCCCCceEEEEEecCCCceeeeCC
Q 039412 98 IVRAKIGTPAQTLLMAMDTSNDAAWVPCT 126 (433)
Q Consensus 98 ~~~i~iGtP~q~~~v~vDTGSs~~wv~~~ 126 (433)
++ |.|| +|.+++++|||.+++-+...
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 45 9999 89999999999999998754
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=76.87 E-value=2.6 Score=32.74 Aligned_cols=28 Identities=7% Similarity=0.080 Sum_probs=24.9
Q ss_pred EEEEEeCCCCceEEEEEecCCCceeeeCCC
Q 039412 98 IVRAKIGTPAQTLLMAMDTSNDAAWVPCTG 127 (433)
Q Consensus 98 ~~~i~iGtP~q~~~v~vDTGSs~~wv~~~~ 127 (433)
.++|.|| +|.++.++|||.+++-+....
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 5789999 899999999999999997654
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=72.02 E-value=4.6 Score=32.27 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=25.3
Q ss_pred cEEEEEEeCCCCceEEEEEecCCCceeeeCC
Q 039412 96 TYIVRAKIGTPAQTLLMAMDTSNDAAWVPCT 126 (433)
Q Consensus 96 ~Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~ 126 (433)
.-++++.|+ +|.+++++|||.+++-+...
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 446889999 89999999999999999754
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=66.22 E-value=6.3 Score=31.06 Aligned_cols=23 Identities=9% Similarity=0.099 Sum_probs=20.1
Q ss_pred eCCCCceEEEEEecCCCceeeeCCC
Q 039412 103 IGTPAQTLLMAMDTSNDAAWVPCTG 127 (433)
Q Consensus 103 iGtP~q~~~v~vDTGSs~~wv~~~~ 127 (433)
|| +|.+++++|||.+++-+....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 67 788999999999999998654
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=64.10 E-value=5.9 Score=34.14 Aligned_cols=28 Identities=25% Similarity=0.255 Sum_probs=24.9
Q ss_pred EEEEEEeCCCCceEEEEEecCCCceeeeCC
Q 039412 97 YIVRAKIGTPAQTLLMAMDTSNDAAWVPCT 126 (433)
Q Consensus 97 Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~ 126 (433)
-.++|.|| +|.+++++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 46889999 99999999999999999754
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=53.65 E-value=12 Score=27.86 Aligned_cols=16 Identities=13% Similarity=0.185 Sum_probs=14.7
Q ss_pred ceEEccccceeeechH
Q 039412 309 GTIIDSGTVFTRLVAP 324 (433)
Q Consensus 309 ~~iiDSGt~~~~lp~~ 324 (433)
.++||||++.+++|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 7999999999999975
No 52
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=44.90 E-value=20 Score=33.05 Aligned_cols=42 Identities=14% Similarity=0.232 Sum_probs=28.8
Q ss_pred CeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeechHHH
Q 039412 263 RIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAY 326 (433)
Q Consensus 263 ~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~ 326 (433)
.+...|+.. ...|.++ |+||.+.+ .++||||++.+++|..-.
T Consensus 5 ~v~~~~~~~----~~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 5 VATNTPTAN----DEEYITP---VTIGGTTL---------------NLNFDTGSADLWVFSTEL 46 (323)
T ss_dssp EEEEEECGG----GSCEEEE---EEETTEEE---------------EEEEETTCCCEEECBTTS
T ss_pred ceeeeecCC----CCEEEEE---EEECCEEE---------------EEEEeCCCcceEEecCCC
Confidence 444555543 4566654 77884443 789999999999997543
No 53
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=43.87 E-value=22 Score=32.79 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=28.4
Q ss_pred CeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeechHHH
Q 039412 263 RIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAY 326 (433)
Q Consensus 263 ~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~ 326 (433)
.+.-.|+.. ...|.++ |+||.+.+ .++||||++.+++|..-.
T Consensus 4 ~v~~~~~~~----~~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 4 SAVTTPQNN----DEEYLTP---VTVGKSTL---------------HLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEEEECTT----TSCEEEE---EEEBTEEE---------------EEEEETTCCCEEEECTTS
T ss_pred eEEeEEcCC----CCEEEEE---EEECCEEE---------------EEEEeCCCccceEeeCCC
Confidence 344455543 4567654 67774443 789999999999997543
No 54
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=43.77 E-value=26 Score=30.05 Aligned_cols=28 Identities=25% Similarity=0.255 Sum_probs=24.6
Q ss_pred EEEEEEeCCCCceEEEEEecCCCceeeeCC
Q 039412 97 YIVRAKIGTPAQTLLMAMDTSNDAAWVPCT 126 (433)
Q Consensus 97 Y~~~i~iGtP~q~~~v~vDTGSs~~wv~~~ 126 (433)
=.+++.|| +|.++.++|||.+++-+...
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 36889999 89999999999999999654
No 55
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=42.51 E-value=23 Score=32.66 Aligned_cols=42 Identities=17% Similarity=0.290 Sum_probs=28.4
Q ss_pred CeeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeechHHH
Q 039412 263 RIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAY 326 (433)
Q Consensus 263 ~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~ 326 (433)
.+.-.|+.. ...|.+ .|.||.+.+ .++||||++.+++|..-.
T Consensus 5 ~v~~~~~~~----~~~Y~~---~i~iG~q~~---------------~v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 5 SVTTNPTSN----DEEYIT---QVTVGDDTL---------------GLDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEEEECGG----GCCEEE---EEEETTEEE---------------EEEEETTCCCEEECBTTS
T ss_pred ceeeeEcCC----CCEEEE---EEEECCEEE---------------EEEEcCCCcceEEecCCC
Confidence 344455543 355664 477884443 799999999999997643
No 56
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=39.13 E-value=31 Score=31.89 Aligned_cols=33 Identities=9% Similarity=0.024 Sum_probs=25.1
Q ss_pred CccEEEE---EEeCC---CCceEEEEEecCCCceeeeCC
Q 039412 94 SPTYIVR---AKIGT---PAQTLLMAMDTSNDAAWVPCT 126 (433)
Q Consensus 94 ~~~Y~~~---i~iGt---P~q~~~v~vDTGSs~~wv~~~ 126 (433)
...|.++ |.||. +.+...++||||+++++++..
T Consensus 192 ~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 192 QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 3567666 56775 246789999999999999864
No 57
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=37.51 E-value=34 Score=31.99 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=29.4
Q ss_pred CCeeeeeCccCCCCCcceEEEeeEEEEC--CEEeecCCCCcccCCCCCCceEEccccceeeechH
Q 039412 262 KRIKYTPLLKNPRRSSLYYVNLLAIRVG--RRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAP 324 (433)
Q Consensus 262 ~~l~~~p~~~~~~~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~ 324 (433)
|.+...|+.... ...|.+ .|.|| .+. ..++||||++.+++|..
T Consensus 5 g~~~~~~l~~~~--~~~Y~~---~i~iGtP~q~---------------~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDFD--LEEYAI---PVSIGTPGQD---------------FYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEETT--TTEEEE---EEEETTTTEE---------------EEEEEETTCCCCEEEBT
T ss_pred CccceEEeecCC--CCEEEE---EEEECCCCcE---------------EEEEEcCCCCCeEECCC
Confidence 556667776521 345655 46777 333 37899999999999975
No 58
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=35.75 E-value=34 Score=31.42 Aligned_cols=16 Identities=13% Similarity=0.131 Sum_probs=14.7
Q ss_pred ceEEccccceeeechH
Q 039412 309 GTIIDSGTVFTRLVAP 324 (433)
Q Consensus 309 ~~iiDSGt~~~~lp~~ 324 (433)
.++||||++.+++|..
T Consensus 30 ~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 30 TVLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCccceEEcCC
Confidence 7999999999999975
No 59
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=32.28 E-value=38 Score=31.20 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=23.8
Q ss_pred ccEEEE---EEeCCC--CceEEEEEecCCCceeeeCC
Q 039412 95 PTYIVR---AKIGTP--AQTLLMAMDTSNDAAWVPCT 126 (433)
Q Consensus 95 ~~Y~~~---i~iGtP--~q~~~v~vDTGSs~~wv~~~ 126 (433)
..|.++ |.||.+ .....++||||++++++|..
T Consensus 193 ~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 193 GWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp SSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred CEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 456554 577752 34578999999999999865
No 60
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=31.35 E-value=48 Score=30.51 Aligned_cols=16 Identities=13% Similarity=0.119 Sum_probs=14.7
Q ss_pred ceEEccccceeeechH
Q 039412 309 GTIIDSGTVFTRLVAP 324 (433)
Q Consensus 309 ~~iiDSGt~~~~lp~~ 324 (433)
.++||||++.+++|..
T Consensus 31 ~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 31 NLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEETTCCCEEECBT
T ss_pred EEEECCCCCCeEEecC
Confidence 7899999999999975
No 61
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=28.63 E-value=40 Score=25.51 Aligned_cols=35 Identities=11% Similarity=0.177 Sum_probs=27.2
Q ss_pred eEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeechHHHHH
Q 039412 279 YYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTA 328 (433)
Q Consensus 279 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~~~~~ 328 (433)
|.=.+..|+|+|+.. .+++|||.-.+.+.......
T Consensus 6 ~~RP~v~v~I~Gq~~---------------e~LLDTGAD~TVl~~~~w~~ 40 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL---------------NVLLDTGADTSVLTTAHYNR 40 (104)
T ss_dssp SSCCEEEEEETTEEE---------------EEEECTTCSSCEEEHHHHHH
T ss_pred cCCCEEEEEECCEEE---------------EEEeccCCCcEEEccccCcc
Confidence 444456689999864 78999999999999876544
No 62
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=28.39 E-value=38 Score=25.41 Aligned_cols=30 Identities=20% Similarity=0.389 Sum_probs=24.0
Q ss_pred eEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeech
Q 039412 279 YYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVA 323 (433)
Q Consensus 279 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~ 323 (433)
|.=.+..++|+|+.. .+++|||.-.+.+.+
T Consensus 6 ~~rP~vtvkI~Gq~~---------------eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLK---------------EALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEE---------------EEEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEE---------------EEEeccCCCcEEEec
Confidence 444556689999875 789999999998875
No 63
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=28.38 E-value=54 Score=28.60 Aligned_cols=31 Identities=16% Similarity=0.049 Sum_probs=23.0
Q ss_pred ccEEEE---EEeCCC-----CceEEEEEecCCCceeeeC
Q 039412 95 PTYIVR---AKIGTP-----AQTLLMAMDTSNDAAWVPC 125 (433)
Q Consensus 95 ~~Y~~~---i~iGtP-----~q~~~v~vDTGSs~~wv~~ 125 (433)
..|.++ |.||.- .....++||||++++++|.
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 456665 677752 3457899999999999975
No 64
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=27.83 E-value=50 Score=30.43 Aligned_cols=16 Identities=25% Similarity=0.354 Sum_probs=14.3
Q ss_pred ceEEccccceeeechH
Q 039412 309 GTIIDSGTVFTRLVAP 324 (433)
Q Consensus 309 ~~iiDSGt~~~~lp~~ 324 (433)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 28 TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEcCCCCCEEEecC
Confidence 7999999999999853
No 65
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=27.23 E-value=52 Score=30.32 Aligned_cols=16 Identities=31% Similarity=0.360 Sum_probs=14.3
Q ss_pred ceEEccccceeeechH
Q 039412 309 GTIIDSGTVFTRLVAP 324 (433)
Q Consensus 309 ~~iiDSGt~~~~lp~~ 324 (433)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 28 TVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEeCCCCceEEecC
Confidence 7899999999999853
No 66
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=25.96 E-value=55 Score=30.20 Aligned_cols=15 Identities=33% Similarity=0.428 Sum_probs=14.0
Q ss_pred ceEEccccceeeech
Q 039412 309 GTIIDSGTVFTRLVA 323 (433)
Q Consensus 309 ~~iiDSGt~~~~lp~ 323 (433)
.++||||++.+++|.
T Consensus 28 ~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 28 SLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEETTCCCCEECS
T ss_pred EEEEeCCChhheecC
Confidence 799999999999986
No 67
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=25.70 E-value=58 Score=30.10 Aligned_cols=16 Identities=19% Similarity=0.304 Sum_probs=14.3
Q ss_pred ceEEccccceeeechH
Q 039412 309 GTIIDSGTVFTRLVAP 324 (433)
Q Consensus 309 ~~iiDSGt~~~~lp~~ 324 (433)
.++||||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 28 NVIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEETTCCCEEEEEE
T ss_pred EEEEeCCCCCeEEecC
Confidence 7999999999999853
No 68
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=25.02 E-value=52 Score=25.45 Aligned_cols=31 Identities=23% Similarity=0.171 Sum_probs=25.7
Q ss_pred cceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeech
Q 039412 277 SLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVA 323 (433)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~ 323 (433)
..|.=.+. ++|+|+.+ .+++|||.-.+.+..
T Consensus 10 ~l~~rP~v-ikI~Gq~~---------------eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPI---------------KFLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEE---------------EEEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEE---------------EEEecCCCCcEEEcc
Confidence 35766777 99999875 789999999999886
No 69
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=25.00 E-value=44 Score=25.03 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=23.7
Q ss_pred ceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeec
Q 039412 278 LYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLV 322 (433)
Q Consensus 278 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp 322 (433)
.|.=.+..++|+|+.+ .+++|||.-.+.+.
T Consensus 5 l~~RP~vti~I~Gq~~---------------e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPV---------------EVLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEE---------------EEEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEE---------------EEEEecCCCceEEc
Confidence 3555566799999876 68999999988874
No 70
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=24.66 E-value=61 Score=28.12 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=23.4
Q ss_pred ccEEE---EEEeCCC----CceEEEEEecCCCceeeeCC
Q 039412 95 PTYIV---RAKIGTP----AQTLLMAMDTSNDAAWVPCT 126 (433)
Q Consensus 95 ~~Y~~---~i~iGtP----~q~~~v~vDTGSs~~wv~~~ 126 (433)
..|.+ .|.||.- .....+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 45655 4668752 34578999999999999864
No 71
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=24.55 E-value=53 Score=30.26 Aligned_cols=30 Identities=17% Similarity=0.203 Sum_probs=22.7
Q ss_pred cceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeechH
Q 039412 277 SLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAP 324 (433)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~ 324 (433)
..|.++ |+||.+.+ .++||||++.+++|..
T Consensus 17 ~~Y~~~---i~iG~Q~~---------------~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAGI---TKIGNQNF---------------LTVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEEE---EEETTEEE---------------EEEEETTCCCEEEECT
T ss_pred CEEEEE---EEECCEEE---------------EEEEeCCCcceEEecC
Confidence 456654 77884443 7899999999999964
No 72
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=24.55 E-value=60 Score=25.73 Aligned_cols=25 Identities=24% Similarity=0.517 Sum_probs=21.1
Q ss_pred eEEEECCEEeecCCCCcccCCCCCCceEEccccceeeech
Q 039412 284 LAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVA 323 (433)
Q Consensus 284 ~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~ 323 (433)
..++|+|+.+ .+++|||...+.|+.
T Consensus 25 v~i~I~G~~~---------------~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 25 ITLKVGGQPV---------------TFLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEEETTEEE---------------EEEECTTCSSCEECS
T ss_pred EEEEECCEEE---------------EEEEeCCCCeEEEcc
Confidence 4488899765 689999999999986
No 73
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=22.83 E-value=71 Score=29.40 Aligned_cols=17 Identities=18% Similarity=0.200 Sum_probs=14.7
Q ss_pred CceEEccccceeeechH
Q 039412 308 AGTIIDSGTVFTRLVAP 324 (433)
Q Consensus 308 ~~~iiDSGt~~~~lp~~ 324 (433)
..++||||++.+++|..
T Consensus 27 ~~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 27 LNVIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEEEETTCCCEEEEEE
T ss_pred EEEEEECCCcceEEEcC
Confidence 37899999999999854
No 74
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=21.84 E-value=80 Score=28.72 Aligned_cols=17 Identities=12% Similarity=0.102 Sum_probs=15.0
Q ss_pred CceEEccccceeeechH
Q 039412 308 AGTIIDSGTVFTRLVAP 324 (433)
Q Consensus 308 ~~~iiDSGt~~~~lp~~ 324 (433)
..++||||++.+++|..
T Consensus 26 ~~v~~DTGSs~~Wv~~~ 42 (320)
T 4aa9_A 26 FTVVFDTGSSDLWVPSI 42 (320)
T ss_dssp EEEEEETTCCCEEEEBT
T ss_pred EEEEEeCCCCceEEcCC
Confidence 37899999999999974
No 75
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=21.53 E-value=80 Score=29.63 Aligned_cols=43 Identities=23% Similarity=0.334 Sum_probs=27.5
Q ss_pred eeeeeCccCCCCCcceEEEeeEEEECCEEeecCCCCcccCCCCCCceEEccccceeeechH
Q 039412 264 IKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAP 324 (433)
Q Consensus 264 l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~iiDSGt~~~~lp~~ 324 (433)
+...|+.... +..|.++ |+||. |+. ...++||||++.+++|..
T Consensus 45 ~~~~~l~n~~--d~~Y~~~---i~iGT-----PpQ--------~~~v~~DTGSs~lWV~s~ 87 (370)
T 3psg_A 45 IGDEPLENYL--DTEYFGT---IGIGT-----PAQ--------DFTVIFDTGSSNLWVPSV 87 (370)
T ss_dssp SCCCTTGGGT--TCCEEEE---EEETT-----TTE--------EEEEEEETTCCCEEEEBT
T ss_pred cceecceecc--CCEEEEE---EEEcC-----CCC--------EEEEEEeCCCCccEEECC
Confidence 4456665422 3456544 67774 211 237999999999999973
No 76
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=21.41 E-value=91 Score=29.48 Aligned_cols=32 Identities=13% Similarity=0.196 Sum_probs=23.7
Q ss_pred ccEEEE---EEeCCC----CceEEEEEecCCCceeeeCC
Q 039412 95 PTYIVR---AKIGTP----AQTLLMAMDTSNDAAWVPCT 126 (433)
Q Consensus 95 ~~Y~~~---i~iGtP----~q~~~v~vDTGSs~~wv~~~ 126 (433)
..|.+. |.||.- .....+++|||++++++|..
T Consensus 242 ~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~ 280 (383)
T 2x0b_A 242 GVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 280 (383)
T ss_dssp TSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHH
Confidence 456554 678752 24578999999999999864
Done!