Query 039413
Match_columns 363
No_of_seqs 237 out of 1322
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 09:26:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039413.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039413hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02534 UDP-glycosyltransfera 100.0 4.2E-63 9E-68 455.0 34.4 358 6-363 7-366 (491)
2 PLN02670 transferase, transfer 100.0 1.3E-60 2.8E-65 436.5 32.0 348 5-363 4-361 (472)
3 PLN02863 UDP-glucoronosyl/UDP- 100.0 2.7E-60 5.9E-65 437.3 33.7 353 1-363 1-365 (477)
4 PLN02764 glycosyltransferase f 100.0 1.1E-59 2.4E-64 427.0 31.9 329 6-363 4-339 (453)
5 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.5E-59 3.3E-64 429.5 32.4 332 1-363 1-346 (451)
6 PLN02992 coniferyl-alcohol glu 100.0 1.4E-59 3.1E-64 430.0 31.5 331 6-363 4-360 (481)
7 PLN00414 glycosyltransferase f 100.0 2.8E-59 6.2E-64 427.1 31.0 328 6-363 3-334 (446)
8 PLN02208 glycosyltransferase f 100.0 5.4E-59 1.2E-63 424.8 30.8 328 6-363 3-333 (442)
9 PLN03015 UDP-glucosyl transfer 100.0 7.3E-59 1.6E-63 422.9 31.3 332 6-363 2-357 (470)
10 PLN03004 UDP-glycosyltransfera 100.0 1.1E-58 2.5E-63 422.0 30.6 338 7-363 3-356 (451)
11 PLN03007 UDP-glucosyltransfera 100.0 2E-57 4.2E-62 422.0 35.3 355 6-363 4-367 (482)
12 PLN02555 limonoid glucosyltran 100.0 1.8E-57 4E-62 417.2 32.3 344 1-363 1-359 (480)
13 PLN00164 glucosyltransferase; 100.0 2.6E-57 5.5E-62 419.1 32.1 334 6-363 2-361 (480)
14 PLN02207 UDP-glycosyltransfera 100.0 3.7E-57 8E-62 413.4 32.6 336 6-363 2-354 (468)
15 PLN02152 indole-3-acetate beta 100.0 4E-57 8.8E-62 412.3 30.5 330 7-363 3-349 (455)
16 PLN02173 UDP-glucosyl transfer 100.0 1.3E-56 2.9E-61 408.2 31.1 322 5-363 3-339 (449)
17 PLN02562 UDP-glycosyltransfera 100.0 3.4E-56 7.3E-61 408.7 33.2 328 6-363 5-350 (448)
18 PLN02167 UDP-glycosyltransfera 100.0 5.5E-55 1.2E-59 404.5 31.2 342 6-363 2-362 (475)
19 PLN02554 UDP-glycosyltransfera 100.0 8.2E-55 1.8E-59 403.9 32.1 336 7-363 2-364 (481)
20 PLN02210 UDP-glucosyl transfer 100.0 2.7E-54 5.8E-59 396.5 32.0 333 1-363 1-346 (456)
21 PLN02448 UDP-glycosyltransfera 100.0 8.2E-51 1.8E-55 375.9 32.0 328 4-363 7-345 (459)
22 PHA03392 egt ecdysteroid UDP-g 100.0 4E-35 8.7E-40 273.2 18.3 306 7-363 20-368 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 4.3E-36 9.3E-41 284.3 -0.9 298 9-363 2-345 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 2.3E-33 5E-38 265.7 8.4 315 7-363 5-358 (496)
25 TIGR01426 MGT glycosyltransfer 99.9 3E-22 6.6E-27 184.0 18.8 281 13-360 1-294 (392)
26 cd03784 GT1_Gtf_like This fami 99.9 3.9E-21 8.4E-26 177.4 13.2 285 8-359 1-306 (401)
27 COG1819 Glycosyl transferases, 99.6 1.2E-14 2.5E-19 132.6 13.2 123 7-145 1-123 (406)
28 PF03033 Glyco_transf_28: Glyc 99.0 1.7E-10 3.7E-15 89.9 4.1 122 10-148 1-131 (139)
29 PF13528 Glyco_trans_1_3: Glyc 98.2 1.8E-05 3.9E-10 70.7 11.1 118 9-147 2-123 (318)
30 TIGR00661 MJ1255 conserved hyp 97.8 0.00019 4E-09 64.3 10.5 113 12-146 5-121 (321)
31 PRK12446 undecaprenyldiphospho 97.4 0.0027 5.8E-08 57.5 12.6 117 9-147 3-123 (352)
32 PRK00726 murG undecaprenyldiph 96.6 0.045 9.9E-07 49.7 12.9 117 8-144 2-120 (357)
33 cd03785 GT1_MurG MurG is an N- 96.6 0.05 1.1E-06 49.2 12.8 116 9-144 1-118 (350)
34 TIGR01133 murG undecaprenyldip 96.5 0.058 1.3E-06 48.7 12.9 116 9-144 2-119 (348)
35 COG0707 MurG UDP-N-acetylgluco 96.4 0.085 1.9E-06 47.6 12.7 118 9-148 2-124 (357)
36 cd03818 GT1_ExpC_like This fam 95.9 0.27 5.8E-06 45.4 13.8 101 24-146 13-117 (396)
37 TIGR00215 lpxB lipid-A-disacch 95.7 0.054 1.2E-06 49.8 8.3 36 8-44 6-41 (385)
38 cd03816 GT1_ALG1_like This fam 95.3 0.49 1.1E-05 44.0 13.4 38 7-44 3-40 (415)
39 PLN02871 UDP-sulfoquinovose:DA 95.3 2.8 6E-05 39.7 23.3 41 5-45 56-101 (465)
40 TIGR03590 PseG pseudaminic aci 94.9 0.53 1.1E-05 41.2 11.6 31 17-47 13-43 (279)
41 PF13579 Glyco_trans_4_4: Glyc 94.7 0.043 9.4E-07 42.9 4.1 96 23-145 6-103 (160)
42 PF13477 Glyco_trans_4_2: Glyc 94.4 0.61 1.3E-05 35.6 9.9 99 10-143 2-104 (139)
43 PF04007 DUF354: Protein of un 93.7 1.3 2.9E-05 39.6 11.7 104 18-148 10-113 (335)
44 cd03800 GT1_Sucrose_synthase T 93.7 0.54 1.2E-05 43.1 9.7 28 18-45 21-48 (398)
45 PRK10307 putative glycosyl tra 93.4 1 2.2E-05 41.8 11.0 22 24-45 21-42 (412)
46 cd04962 GT1_like_5 This family 93.2 1.2 2.7E-05 40.3 11.2 37 9-45 2-39 (371)
47 cd03823 GT1_ExpE7_like This fa 93.1 1.4 3E-05 39.3 11.4 29 18-46 15-43 (359)
48 COG4671 Predicted glycosyl tra 92.9 0.64 1.4E-05 41.1 8.0 57 6-70 8-68 (400)
49 PF12000 Glyco_trans_4_3: Gkyc 92.8 2.3 5.1E-05 33.9 10.5 43 103-146 53-96 (171)
50 cd03794 GT1_wbuB_like This fam 92.3 1.7 3.8E-05 39.1 10.9 28 18-45 14-41 (394)
51 PRK00025 lpxB lipid-A-disaccha 91.8 2.1 4.6E-05 39.1 10.8 35 8-43 2-36 (380)
52 PLN00142 sucrose synthase 91.1 1.8 3.8E-05 43.5 9.9 36 109-144 400-437 (815)
53 PF06722 DUF1205: Protein of u 90.1 0.43 9.4E-06 34.1 3.5 63 268-333 28-95 (97)
54 TIGR02470 sucr_synth sucrose s 89.8 8.5 0.00018 38.7 13.3 119 18-144 279-414 (784)
55 TIGR03449 mycothiol_MshA UDP-N 89.0 3.6 7.8E-05 37.9 9.9 28 17-44 19-46 (405)
56 TIGR02472 sucr_P_syn_N sucrose 88.9 4.3 9.3E-05 38.1 10.3 26 19-44 27-54 (439)
57 cd03796 GT1_PIG-A_like This fa 88.8 5.5 0.00012 36.7 10.9 27 18-44 14-40 (398)
58 cd03802 GT1_AviGT4_like This f 87.9 9.4 0.0002 33.8 11.6 28 18-45 19-46 (335)
59 cd03819 GT1_WavL_like This fam 87.1 8 0.00017 34.6 10.7 27 18-44 10-36 (355)
60 cd03805 GT1_ALG2_like This fam 87.0 12 0.00026 34.1 12.0 26 19-44 14-39 (392)
61 TIGR02468 sucrsPsyn_pln sucros 86.7 10 0.00022 39.3 11.8 27 18-44 195-223 (1050)
62 COG0496 SurE Predicted acid ph 86.1 3.8 8.3E-05 34.8 7.2 29 20-49 12-40 (252)
63 PF13439 Glyco_transf_4: Glyco 83.1 1.5 3.2E-05 34.6 3.6 28 18-45 12-39 (177)
64 COG3980 spsG Spore coat polysa 82.8 2.5 5.5E-05 36.3 4.7 97 8-149 1-104 (318)
65 COG0801 FolK 7,8-dihydro-6-hyd 82.7 2.7 5.9E-05 33.0 4.6 35 282-316 3-37 (160)
66 cd03801 GT1_YqgM_like This fam 81.3 23 0.00051 31.2 11.1 29 18-46 14-42 (374)
67 PF08660 Alg14: Oligosaccharid 81.2 25 0.00054 28.1 9.8 29 15-43 5-34 (170)
68 cd03814 GT1_like_2 This family 81.2 2.6 5.7E-05 37.7 4.8 28 18-45 14-41 (364)
69 TIGR00087 surE 5'/3'-nucleotid 80.8 8.1 0.00018 32.9 7.2 26 23-49 15-40 (244)
70 cd03798 GT1_wlbH_like This fam 80.6 16 0.00036 32.3 9.9 30 17-46 13-42 (377)
71 PRK13609 diacylglycerol glucos 80.1 2.8 6E-05 38.4 4.6 37 7-43 4-41 (380)
72 PRK13932 stationary phase surv 80.1 8.2 0.00018 33.1 7.0 41 6-48 4-44 (257)
73 PRK02261 methylaspartate mutas 79.8 7.1 0.00015 29.9 6.0 44 6-49 2-45 (137)
74 cd03808 GT1_cap1E_like This fa 78.8 3 6.4E-05 37.0 4.4 38 10-47 2-39 (359)
75 cd02067 B12-binding B12 bindin 76.7 8.4 0.00018 28.5 5.6 38 9-46 1-38 (119)
76 PLN02846 digalactosyldiacylgly 76.6 4.2 9.1E-05 38.3 4.7 40 6-45 3-47 (462)
77 PRK13933 stationary phase surv 76.6 13 0.00027 31.9 7.1 24 24-48 16-39 (253)
78 cd03817 GT1_UGDG_like This fam 76.1 4.9 0.00011 35.9 5.0 30 16-45 12-41 (374)
79 PRK00654 glgA glycogen synthas 75.7 4.5 9.7E-05 38.3 4.8 29 17-45 16-44 (466)
80 COG1797 CobB Cobyrinic acid a, 75.2 18 0.00038 33.5 8.0 29 13-41 7-35 (451)
81 cd03806 GT1_ALG11_like This fa 74.3 36 0.00078 31.7 10.3 115 19-146 15-137 (419)
82 cd03825 GT1_wcfI_like This fam 74.0 5.2 0.00011 35.9 4.6 37 9-45 2-40 (365)
83 PLN02275 transferase, transfer 73.3 73 0.0016 29.0 14.5 38 6-45 5-43 (371)
84 PRK13935 stationary phase surv 72.5 17 0.00038 31.1 7.0 26 22-48 14-39 (253)
85 TIGR00236 wecB UDP-N-acetylglu 70.6 39 0.00085 30.6 9.5 111 9-144 2-116 (365)
86 PRK00346 surE 5'(3')-nucleotid 70.6 25 0.00055 30.1 7.5 26 22-48 14-39 (250)
87 TIGR03087 stp1 sugar transfera 70.4 8.4 0.00018 35.5 5.2 32 13-45 8-40 (397)
88 PF02310 B12-binding: B12 bind 69.8 22 0.00047 26.2 6.4 42 9-50 2-43 (121)
89 TIGR02095 glgA glycogen/starch 69.6 8.7 0.00019 36.4 5.1 29 17-45 16-44 (473)
90 PRK05749 3-deoxy-D-manno-octul 69.1 29 0.00063 32.3 8.5 29 9-37 51-79 (425)
91 cd03807 GT1_WbnK_like This fam 68.7 67 0.0015 28.3 10.6 32 14-45 8-39 (365)
92 cd01635 Glycosyltransferase_GT 68.2 8.3 0.00018 31.6 4.3 26 17-42 12-37 (229)
93 cd04951 GT1_WbdM_like This fam 68.0 6.3 0.00014 35.3 3.8 28 17-44 11-38 (360)
94 COG1519 KdtA 3-deoxy-D-manno-o 67.9 91 0.002 28.9 10.7 100 9-146 50-154 (419)
95 cd01840 SGNH_hydrolase_yrhL_li 66.9 9.8 0.00021 29.5 4.2 38 279-317 50-87 (150)
96 PRK13931 stationary phase surv 66.9 43 0.00094 28.9 8.3 26 23-48 15-43 (261)
97 cd03821 GT1_Bme6_like This fam 66.6 9.9 0.00021 33.9 4.8 30 17-46 13-42 (375)
98 PF02951 GSH-S_N: Prokaryotic 65.9 11 0.00023 28.2 3.9 36 9-44 2-40 (119)
99 TIGR03568 NeuC_NnaA UDP-N-acet 65.0 65 0.0014 29.4 9.7 113 13-147 5-126 (365)
100 cd03791 GT1_Glycogen_synthase_ 63.8 12 0.00026 35.4 4.9 28 18-45 16-43 (476)
101 cd03786 GT1_UDP-GlcNAc_2-Epime 62.8 50 0.0011 29.7 8.6 33 13-45 4-37 (363)
102 cd03820 GT1_amsD_like This fam 62.6 16 0.00035 32.0 5.3 30 17-46 12-41 (348)
103 PF04244 DPRP: Deoxyribodipyri 62.2 8.5 0.00018 32.3 3.1 26 20-45 47-72 (224)
104 PRK05595 replicative DNA helic 62.2 88 0.0019 29.5 10.2 41 10-50 204-245 (444)
105 PF04127 DFP: DNA / pantothena 62.1 9.3 0.0002 31.0 3.2 22 24-45 32-53 (185)
106 PRK08760 replicative DNA helic 62.1 90 0.0019 29.7 10.2 40 10-49 232-272 (476)
107 COG1066 Sms Predicted ATP-depe 62.0 1.4E+02 0.0029 27.8 11.2 42 9-51 95-136 (456)
108 cd04955 GT1_like_6 This family 61.9 13 0.00029 33.2 4.7 29 17-45 14-42 (363)
109 PRK14092 2-amino-4-hydroxy-6-h 61.8 20 0.00044 28.4 4.9 34 276-309 3-36 (163)
110 COG1484 DnaC DNA replication p 61.4 15 0.00032 31.6 4.5 46 7-52 105-150 (254)
111 COG1817 Uncharacterized protei 60.8 1.2E+02 0.0026 26.9 11.0 106 17-148 9-114 (346)
112 cd03795 GT1_like_4 This family 60.3 16 0.00034 32.6 4.8 30 17-46 13-42 (357)
113 PF08323 Glyco_transf_5: Starc 60.0 10 0.00022 32.4 3.2 27 19-45 17-43 (245)
114 COG2910 Putative NADH-flavin r 59.6 9.6 0.00021 30.7 2.8 31 9-43 2-32 (211)
115 PF12146 Hydrolase_4: Putative 57.8 22 0.00049 24.1 4.1 34 8-41 16-49 (79)
116 PF02441 Flavoprotein: Flavopr 57.5 21 0.00046 26.9 4.4 38 9-47 2-39 (129)
117 COG3914 Spy Predicted O-linked 57.4 32 0.0007 33.0 6.2 42 278-319 427-468 (620)
118 PF13844 Glyco_transf_41: Glyc 57.0 20 0.00043 33.8 4.8 43 278-320 282-324 (468)
119 cd02070 corrinoid_protein_B12- 56.9 41 0.00088 27.7 6.3 43 7-49 82-124 (201)
120 cd03811 GT1_WabH_like This fam 56.9 20 0.00043 31.4 4.9 32 15-46 9-40 (353)
121 TIGR00715 precor6x_red precorr 54.6 1.2E+02 0.0027 26.1 9.0 22 24-45 12-33 (256)
122 PRK09165 replicative DNA helic 54.4 1.6E+02 0.0034 28.3 10.5 41 10-50 220-275 (497)
123 PRK12475 thiamine/molybdopteri 54.4 1.2E+02 0.0025 27.5 9.2 33 7-44 24-57 (338)
124 TIGR02370 pyl_corrinoid methyl 54.4 48 0.001 27.2 6.2 45 6-50 83-127 (197)
125 PF01975 SurE: Survival protei 54.0 14 0.0003 30.3 3.0 29 20-48 12-40 (196)
126 cd02071 MM_CoA_mut_B12_BD meth 51.3 40 0.00087 25.1 4.9 39 9-47 1-39 (122)
127 PRK14099 glycogen synthase; Pr 51.3 28 0.00061 33.2 5.0 40 6-45 2-47 (485)
128 PRK06321 replicative DNA helic 50.7 2.3E+02 0.005 27.0 11.5 41 10-50 229-270 (472)
129 cd01121 Sms Sms (bacterial rad 50.4 2E+02 0.0044 26.3 11.5 41 10-50 85-125 (372)
130 PLN02316 synthase/transferase 49.5 40 0.00087 35.3 6.0 41 6-46 586-632 (1036)
131 TIGR01498 folK 2-amino-4-hydro 48.8 16 0.00035 27.6 2.4 27 283-309 1-27 (127)
132 PRK07773 replicative DNA helic 48.5 2.2E+02 0.0047 29.8 11.1 41 10-50 220-261 (886)
133 PF13450 NAD_binding_8: NAD(P) 48.0 25 0.00054 23.0 3.0 20 24-43 8-27 (68)
134 cd01424 MGS_CPS_II Methylglyox 47.5 1.1E+02 0.0023 22.2 8.1 83 19-142 10-99 (110)
135 KOG4626 O-linked N-acetylgluco 46.7 37 0.00081 33.0 4.8 44 278-321 756-799 (966)
136 cd02069 methionine_synthase_B1 46.6 74 0.0016 26.5 6.3 44 6-49 87-130 (213)
137 PRK05636 replicative DNA helic 46.6 2.3E+02 0.0049 27.3 10.2 40 10-49 268-308 (505)
138 TIGR03878 thermo_KaiC_2 KaiC d 46.3 1.2E+02 0.0025 26.2 7.6 38 9-46 38-75 (259)
139 COG1703 ArgK Putative periplas 46.2 57 0.0012 28.7 5.5 39 8-46 52-90 (323)
140 COG1435 Tdk Thymidine kinase [ 45.6 1.6E+02 0.0035 24.2 7.7 36 9-44 5-41 (201)
141 PRK08305 spoVFB dipicolinate s 44.6 28 0.0006 28.6 3.3 36 9-45 7-43 (196)
142 cd03792 GT1_Trehalose_phosphor 44.5 2.1E+02 0.0045 25.9 9.6 30 16-45 10-39 (372)
143 PRK09620 hypothetical protein; 44.4 26 0.00056 29.6 3.3 21 24-44 32-52 (229)
144 TIGR00347 bioD dethiobiotin sy 44.1 50 0.0011 25.9 4.8 27 15-41 6-32 (166)
145 cd03412 CbiK_N Anaerobic cobal 43.8 45 0.00099 25.1 4.2 38 281-318 2-41 (127)
146 PF00070 Pyr_redox: Pyridine n 43.7 41 0.00089 22.6 3.7 22 23-44 10-31 (80)
147 PF07894 DUF1669: Protein of u 43.4 47 0.001 28.9 4.6 44 103-147 135-183 (284)
148 PF08452 DNAP_B_exo_N: DNA pol 42.7 16 0.00035 17.7 1.0 18 268-285 3-20 (22)
149 KOG1014 17 beta-hydroxysteroid 42.6 27 0.00058 30.7 3.1 19 24-42 62-80 (312)
150 PF09314 DUF1972: Domain of un 42.4 45 0.00097 27.1 4.2 23 23-45 22-44 (185)
151 PRK14098 glycogen synthase; Pr 42.0 51 0.0011 31.5 5.2 38 8-45 6-49 (489)
152 PRK06732 phosphopantothenate-- 41.5 29 0.00062 29.3 3.1 30 12-43 19-48 (229)
153 PRK10239 2-amino-4-hydroxy-6-h 41.4 29 0.00062 27.4 2.8 28 282-309 3-30 (159)
154 PF07015 VirC1: VirC1 protein; 41.3 71 0.0015 27.0 5.3 34 16-49 11-44 (231)
155 PRK01021 lpxB lipid-A-disaccha 41.2 3.6E+02 0.0079 26.6 11.9 36 116-151 309-349 (608)
156 cd01421 IMPCH Inosine monophos 40.9 1.3E+02 0.0029 24.4 6.5 29 22-52 11-39 (187)
157 PRK09841 cryptic autophosphory 40.9 3E+02 0.0065 27.9 10.6 41 7-47 530-572 (726)
158 cd06533 Glyco_transf_WecG_TagA 40.6 76 0.0016 25.3 5.3 87 213-318 47-133 (171)
159 cd00483 HPPK 7,8-dihydro-6-hyd 40.6 28 0.0006 26.3 2.6 27 283-309 1-27 (128)
160 COG2185 Sbm Methylmalonyl-CoA 40.1 59 0.0013 25.1 4.2 39 6-44 11-49 (143)
161 PRK11519 tyrosine kinase; Prov 39.9 97 0.0021 31.3 7.0 40 7-46 525-566 (719)
162 cd03799 GT1_amsK_like This is 39.2 58 0.0013 28.9 5.0 26 20-45 13-38 (355)
163 PF04493 Endonuclease_5: Endon 38.9 50 0.0011 27.3 4.0 42 105-146 77-125 (206)
164 PLN02939 transferase, transfer 38.9 69 0.0015 33.2 5.7 40 6-45 480-525 (977)
165 COG0052 RpsB Ribosomal protein 38.5 71 0.0015 27.1 4.8 45 104-148 137-189 (252)
166 PLN00016 RNA-binding protein; 37.9 47 0.001 30.4 4.2 38 7-44 52-89 (378)
167 TIGR02852 spore_dpaB dipicolin 37.5 45 0.00098 27.1 3.5 37 9-45 2-38 (187)
168 PF13460 NAD_binding_10: NADH( 37.2 39 0.00084 26.9 3.2 21 24-44 11-31 (183)
169 PF04413 Glycos_transf_N: 3-De 37.2 1.9E+02 0.0042 23.4 7.2 39 9-47 22-62 (186)
170 PF03808 Glyco_tran_WecB: Glyc 37.2 94 0.002 24.8 5.3 64 213-290 49-112 (172)
171 PF07355 GRDB: Glycine/sarcosi 36.3 83 0.0018 28.3 5.1 39 104-144 69-117 (349)
172 COG0467 RAD55 RecA-superfamily 36.2 93 0.002 26.7 5.6 45 7-51 23-67 (260)
173 cd03812 GT1_CapH_like This fam 35.8 44 0.00096 29.8 3.7 31 16-46 10-40 (358)
174 cd06559 Endonuclease_V Endonuc 35.7 46 0.001 27.6 3.4 39 107-145 83-128 (208)
175 cd03822 GT1_ecORF704_like This 35.7 60 0.0013 28.8 4.6 28 18-45 13-40 (366)
176 PF01288 HPPK: 7,8-dihydro-6-h 35.7 43 0.00093 25.3 2.9 26 284-309 1-26 (127)
177 COG0300 DltE Short-chain dehyd 35.5 40 0.00088 29.1 3.1 39 9-52 7-45 (265)
178 COG1255 Uncharacterized protei 35.5 43 0.00094 24.7 2.7 20 24-43 25-44 (129)
179 PRK06603 enoyl-(acyl carrier p 34.8 94 0.002 26.5 5.4 41 1-42 1-41 (260)
180 COG1090 Predicted nucleoside-d 34.7 43 0.00093 29.1 3.0 22 24-45 11-32 (297)
181 COG2845 Uncharacterized protei 34.7 44 0.00096 29.5 3.2 48 268-315 166-232 (354)
182 PF01210 NAD_Gly3P_dh_N: NAD-d 34.6 43 0.00094 26.2 3.0 22 24-45 11-32 (157)
183 KOG0541 Alkyl hydroperoxide re 34.3 1.1E+02 0.0024 24.0 4.9 36 9-44 45-87 (171)
184 PRK13982 bifunctional SbtC-lik 34.1 41 0.00088 31.9 3.1 38 8-45 257-306 (475)
185 COG0162 TyrS Tyrosyl-tRNA synt 34.1 50 0.0011 30.5 3.6 35 9-44 36-73 (401)
186 cd02034 CooC The accessory pro 33.9 1.2E+02 0.0027 22.3 5.2 37 9-45 1-37 (116)
187 KOG1838 Alpha/beta hydrolase [ 33.8 1.2E+02 0.0026 28.1 5.8 38 7-44 125-163 (409)
188 cd03409 Chelatase_Class_II Cla 33.7 1.2E+02 0.0026 21.3 5.0 39 281-319 1-42 (101)
189 COG0569 TrkA K+ transport syst 33.5 38 0.00083 28.4 2.6 21 24-44 12-32 (225)
190 PF06925 MGDG_synth: Monogalac 33.0 84 0.0018 24.8 4.5 42 103-146 77-124 (169)
191 PF06180 CbiK: Cobalt chelatas 32.8 71 0.0015 27.6 4.2 39 281-319 2-43 (262)
192 cd03416 CbiX_SirB_N Sirohydroc 32.5 84 0.0018 22.2 4.0 36 281-316 1-38 (101)
193 cd01829 SGNH_hydrolase_peri2 S 32.2 1E+02 0.0022 24.8 5.0 47 269-316 50-115 (200)
194 cd01141 TroA_d Periplasmic bin 32.1 80 0.0017 25.3 4.3 40 104-146 59-100 (186)
195 PRK00881 purH bifunctional pho 31.3 2.2E+02 0.0047 27.4 7.3 30 21-52 14-43 (513)
196 TIGR01005 eps_transp_fam exopo 31.3 4.9E+02 0.011 26.5 10.5 41 7-47 545-587 (754)
197 KOG2941 Beta-1,4-mannosyltrans 31.0 3.2E+02 0.0069 24.9 7.7 61 5-71 10-70 (444)
198 PRK05973 replicative DNA helic 30.8 1.3E+02 0.0028 25.6 5.3 42 9-50 66-107 (237)
199 PRK10422 lipopolysaccharide co 30.7 81 0.0018 28.5 4.5 43 7-49 5-49 (352)
200 PF03720 UDPG_MGDP_dh_C: UDP-g 30.6 68 0.0015 23.1 3.2 26 22-47 17-42 (106)
201 TIGR02113 coaC_strep phosphopa 30.3 67 0.0014 25.9 3.4 30 16-45 8-37 (177)
202 PF05724 TPMT: Thiopurine S-me 30.3 71 0.0015 26.7 3.7 27 10-42 40-66 (218)
203 TIGR00640 acid_CoA_mut_C methy 30.1 78 0.0017 24.0 3.6 39 5-43 51-90 (132)
204 PRK05920 aromatic acid decarbo 29.7 67 0.0015 26.6 3.4 37 9-46 5-41 (204)
205 PRK07313 phosphopantothenoylcy 29.6 75 0.0016 25.7 3.6 38 9-47 3-40 (182)
206 PLN02891 IMP cyclohydrolase 29.3 2E+02 0.0044 27.6 6.7 89 20-126 31-123 (547)
207 PRK04148 hypothetical protein; 29.3 60 0.0013 24.8 2.8 30 8-43 18-47 (134)
208 COG4081 Uncharacterized protei 29.1 1.1E+02 0.0025 23.0 4.1 35 10-44 6-41 (148)
209 PRK07666 fabG 3-ketoacyl-(acyl 29.1 1.6E+02 0.0034 24.5 5.8 22 22-43 18-39 (239)
210 PRK13604 luxD acyl transferase 29.0 1.4E+02 0.003 26.5 5.4 33 9-41 38-70 (307)
211 COG3349 Uncharacterized conser 29.0 46 0.001 31.5 2.6 21 23-43 11-31 (485)
212 cd02065 B12-binding_like B12 b 28.9 1.6E+02 0.0035 21.5 5.2 37 10-46 2-38 (125)
213 TIGR02114 coaB_strep phosphopa 28.7 58 0.0013 27.4 2.9 21 22-42 26-46 (227)
214 COG4088 Predicted nucleotide k 28.6 86 0.0019 26.1 3.7 34 10-43 4-37 (261)
215 TIGR00355 purH phosphoribosyla 28.4 2.4E+02 0.0051 27.0 6.9 29 22-52 11-39 (511)
216 COG2120 Uncharacterized protei 28.4 1.2E+02 0.0026 25.7 4.8 34 9-43 13-46 (237)
217 PF02684 LpxB: Lipid-A-disacch 28.3 3E+02 0.0065 25.3 7.5 36 116-151 81-121 (373)
218 PRK04940 hypothetical protein; 28.2 1.6E+02 0.0035 23.8 5.2 32 117-148 60-92 (180)
219 cd01981 Pchlide_reductase_B Pc 28.2 1E+02 0.0022 28.8 4.8 35 107-146 362-396 (430)
220 TIGR02193 heptsyl_trn_I lipopo 28.0 79 0.0017 28.0 3.9 42 9-50 1-44 (319)
221 TIGR00176 mobB molybdopterin-g 28.0 1.3E+02 0.0029 23.4 4.7 35 10-44 2-36 (155)
222 PRK14089 ipid-A-disaccharide s 27.9 1.7E+02 0.0036 26.6 5.9 48 104-152 64-116 (347)
223 COG0381 WecB UDP-N-acetylgluco 27.6 4.9E+02 0.011 24.0 9.0 111 13-146 8-124 (383)
224 PRK12311 rpsB 30S ribosomal pr 27.6 39 0.00085 30.2 1.8 33 116-148 151-185 (326)
225 PRK08939 primosomal protein Dn 27.5 99 0.0022 27.4 4.3 39 8-46 157-195 (306)
226 PRK06719 precorrin-2 dehydroge 27.5 80 0.0017 24.8 3.4 32 8-44 14-45 (157)
227 cd01833 XynB_like SGNH_hydrola 27.5 1.3E+02 0.0029 23.0 4.7 47 269-316 31-86 (157)
228 PRK10916 ADP-heptose:LPS hepto 27.4 1E+02 0.0022 27.8 4.5 42 9-50 2-45 (348)
229 PRK03359 putative electron tra 27.1 1.3E+02 0.0028 26.0 4.7 31 117-147 112-148 (256)
230 PRK11617 endonuclease V; Provi 27.1 52 0.0011 27.6 2.3 40 106-145 86-132 (224)
231 COG0541 Ffh Signal recognition 27.1 4.8E+02 0.01 24.6 8.5 41 8-48 101-141 (451)
232 PF03853 YjeF_N: YjeF-related 27.1 77 0.0017 25.2 3.3 33 7-42 25-59 (169)
233 PF02558 ApbA: Ketopantoate re 26.8 68 0.0015 24.6 2.9 21 25-45 11-31 (151)
234 PRK07688 thiamine/molybdopteri 26.8 4.8E+02 0.01 23.6 9.2 33 7-44 24-57 (339)
235 PF05728 UPF0227: Uncharacteri 26.5 1.5E+02 0.0033 24.1 4.9 43 106-148 48-91 (187)
236 PRK00090 bioD dithiobiotin syn 26.5 1.4E+02 0.003 24.8 4.9 28 15-42 8-35 (222)
237 TIGR02700 flavo_MJ0208 archaeo 26.0 1E+02 0.0022 26.1 4.0 34 13-46 4-40 (234)
238 PF12695 Abhydrolase_5: Alpha/ 25.9 1.6E+02 0.0035 21.8 4.9 33 12-44 3-35 (145)
239 cd00861 ProRS_anticodon_short 25.5 1.4E+02 0.0031 20.4 4.2 35 8-42 2-38 (94)
240 cd01828 sialate_O-acetylestera 25.3 1.5E+02 0.0033 23.0 4.8 45 270-316 41-94 (169)
241 PF08897 DUF1841: Domain of un 25.3 51 0.0011 25.1 1.8 18 16-33 57-74 (137)
242 PRK12342 hypothetical protein; 25.1 1.6E+02 0.0034 25.4 4.9 31 117-147 109-145 (254)
243 PRK06222 ferredoxin-NADP(+) re 24.9 1.1E+02 0.0024 26.6 4.1 38 9-48 100-137 (281)
244 PTZ00445 p36-lilke protein; Pr 24.8 85 0.0019 26.1 3.1 28 19-46 74-102 (219)
245 PF03403 PAF-AH_p_II: Platelet 24.7 74 0.0016 29.3 3.1 38 6-43 98-135 (379)
246 PRK15427 colanic acid biosynth 24.7 1.3E+02 0.0027 27.9 4.7 33 11-44 6-38 (406)
247 PF03698 UPF0180: Uncharacteri 24.6 73 0.0016 21.8 2.2 22 23-44 9-30 (80)
248 CHL00076 chlB photochlorophyll 24.6 1.2E+02 0.0026 29.2 4.6 35 106-145 365-399 (513)
249 PF03205 MobB: Molybdopterin g 24.5 1.6E+02 0.0035 22.5 4.5 34 9-42 2-35 (140)
250 PF09140 MipZ: ATPase MipZ; I 24.5 2.2E+02 0.0048 24.5 5.5 46 9-54 1-48 (261)
251 PLN02695 GDP-D-mannose-3',5'-e 24.4 1.7E+02 0.0038 26.6 5.5 34 6-43 20-53 (370)
252 PRK03094 hypothetical protein; 24.4 77 0.0017 21.7 2.3 20 24-43 10-29 (80)
253 PRK00039 ruvC Holliday junctio 24.4 2.1E+02 0.0045 22.7 5.2 45 101-147 47-106 (164)
254 cd03115 SRP The signal recogni 24.4 2.1E+02 0.0046 22.5 5.4 38 10-47 3-40 (173)
255 PRK06835 DNA replication prote 24.3 1.2E+02 0.0026 27.2 4.3 39 8-46 184-222 (329)
256 cd01124 KaiC KaiC is a circadi 24.3 2.4E+02 0.0051 22.4 5.8 41 10-50 2-42 (187)
257 cd01147 HemV-2 Metal binding p 24.0 1.4E+02 0.003 25.4 4.6 40 105-147 65-107 (262)
258 TIGR00421 ubiX_pad polyprenyl 24.0 1E+02 0.0022 24.9 3.4 25 24-48 15-39 (181)
259 PRK10964 ADP-heptose:LPS hepto 23.9 1.1E+02 0.0023 27.2 4.0 40 8-47 1-42 (322)
260 cd01983 Fer4_NifH The Fer4_Nif 23.9 2.2E+02 0.0047 19.1 4.9 32 11-42 3-34 (99)
261 COG0299 PurN Folate-dependent 23.9 1.4E+02 0.003 24.5 4.1 29 117-145 29-57 (200)
262 TIGR01918 various_sel_PB selen 23.8 1.7E+02 0.0038 27.1 5.1 40 104-145 65-114 (431)
263 TIGR01917 gly_red_sel_B glycin 23.7 1.7E+02 0.0038 27.1 5.1 40 104-145 65-114 (431)
264 PRK05986 cob(I)alamin adenolsy 23.6 1.9E+02 0.0041 23.7 4.9 38 6-43 21-58 (191)
265 KOG0332 ATP-dependent RNA heli 23.6 1.7E+02 0.0037 26.8 4.8 26 23-48 342-367 (477)
266 PRK09361 radB DNA repair and r 23.5 2E+02 0.0043 23.9 5.3 36 9-44 25-60 (225)
267 PF03796 DnaB_C: DnaB-like hel 23.4 2.3E+02 0.0049 24.2 5.8 41 10-50 22-63 (259)
268 PRK13886 conjugal transfer pro 23.2 2.5E+02 0.0054 24.0 5.7 41 8-48 4-44 (241)
269 PLN00141 Tic62-NAD(P)-related 23.0 2E+02 0.0044 24.2 5.4 33 7-43 17-49 (251)
270 TIGR01007 eps_fam capsular exo 23.0 3.1E+02 0.0068 22.2 6.3 40 8-47 17-58 (204)
271 COG0543 UbiB 2-polyprenylpheno 22.9 1.2E+02 0.0025 26.0 3.8 37 10-48 110-148 (252)
272 COG3046 Uncharacterized protei 22.9 1.1E+02 0.0023 28.3 3.5 26 20-45 51-76 (505)
273 PF01738 DLH: Dienelactone hyd 22.8 1.8E+02 0.0039 23.9 4.9 33 9-42 16-48 (218)
274 PRK06249 2-dehydropantoate 2-r 22.8 1.1E+02 0.0024 27.1 3.8 34 6-44 4-37 (313)
275 PF01380 SIS: SIS domain SIS d 22.7 1.9E+02 0.004 21.3 4.6 32 15-46 60-91 (131)
276 PRK06849 hypothetical protein; 22.7 2E+02 0.0043 26.4 5.6 35 7-45 4-38 (389)
277 PRK09219 xanthine phosphoribos 22.7 1.8E+02 0.0039 23.7 4.6 32 116-147 49-82 (189)
278 cd03789 GT1_LPS_heptosyltransf 22.5 1.3E+02 0.0028 26.0 4.1 42 9-50 1-44 (279)
279 PF02603 Hpr_kinase_N: HPr Ser 22.5 1.2E+02 0.0026 22.8 3.3 39 104-144 71-111 (127)
280 TIGR01278 DPOR_BchB light-inde 22.1 1.5E+02 0.0032 28.6 4.6 27 116-145 363-389 (511)
281 TIGR01182 eda Entner-Doudoroff 22.1 3.7E+02 0.0081 22.2 6.4 57 212-291 121-179 (204)
282 PF01316 Arg_repressor: Argini 22.0 52 0.0011 21.9 1.1 18 25-42 23-40 (70)
283 PF13614 AAA_31: AAA domain; P 22.0 2.8E+02 0.0061 21.1 5.6 38 11-48 5-42 (157)
284 TIGR01689 EcbF-BcbF capsule bi 22.0 1.2E+02 0.0027 22.8 3.3 24 23-46 28-51 (126)
285 cd01836 FeeA_FeeB_like SGNH_hy 22.0 1.8E+02 0.0038 23.2 4.6 47 269-315 55-112 (191)
286 cd01452 VWA_26S_proteasome_sub 21.9 3.5E+02 0.0075 22.0 6.1 34 10-43 111-144 (187)
287 PRK12828 short chain dehydroge 21.9 2.4E+02 0.0053 23.2 5.6 31 9-43 9-39 (239)
288 TIGR00745 apbA_panE 2-dehydrop 21.8 75 0.0016 27.6 2.5 19 26-44 5-23 (293)
289 PRK14106 murD UDP-N-acetylmura 21.7 1.7E+02 0.0036 27.5 4.9 31 9-44 7-37 (450)
290 PRK00923 sirohydrochlorin coba 21.6 1.8E+02 0.0039 21.6 4.2 36 281-316 3-40 (126)
291 cd01018 ZntC Metal binding pro 21.5 2.9E+02 0.0062 23.8 6.0 33 116-148 216-250 (266)
292 PF01266 DAO: FAD dependent ox 21.4 89 0.0019 27.8 3.0 21 24-44 11-31 (358)
293 cd01916 ACS_1 Acetyl-CoA synth 21.3 1.4E+02 0.0031 30.0 4.4 32 116-147 264-297 (731)
294 PRK00771 signal recognition pa 21.3 2.5E+02 0.0054 26.4 5.9 40 8-47 96-135 (437)
295 KOG3062 RNA polymerase II elon 21.2 2.4E+02 0.0052 23.9 5.0 29 9-37 3-31 (281)
296 PF09001 DUF1890: Domain of un 21.2 79 0.0017 24.1 2.1 27 19-45 11-37 (139)
297 PLN02211 methyl indole-3-aceta 21.2 2.2E+02 0.0048 24.5 5.3 36 7-43 18-53 (273)
298 PRK05541 adenylylsulfate kinas 21.0 2.8E+02 0.006 21.9 5.5 42 1-42 1-42 (176)
299 COG2085 Predicted dinucleotide 20.9 1.1E+02 0.0024 25.3 3.1 23 24-46 13-35 (211)
300 PF01695 IstB_IS21: IstB-like 20.9 2.3E+02 0.0051 22.7 5.0 38 7-44 47-84 (178)
301 cd02067 B12-binding B12 bindin 20.9 1.7E+02 0.0037 21.3 4.0 38 6-43 49-87 (119)
302 PRK04020 rps2P 30S ribosomal p 20.9 1.3E+02 0.0028 24.9 3.4 32 117-148 114-147 (204)
303 PLN03050 pyridoxine (pyridoxam 20.8 97 0.0021 26.5 2.8 33 8-43 61-95 (246)
304 cd00550 ArsA_ATPase Oxyanion-t 20.7 1.8E+02 0.0039 24.9 4.6 37 10-46 3-39 (254)
305 cd03414 CbiX_SirB_C Sirohydroc 20.7 97 0.0021 22.6 2.6 37 281-317 2-40 (117)
306 COG2894 MinD Septum formation 20.6 2.5E+02 0.0055 23.7 5.0 36 9-44 3-40 (272)
307 PF14626 RNase_Zc3h12a_2: Zc3h 20.5 1E+02 0.0022 22.8 2.5 25 22-46 10-34 (122)
308 TIGR00234 tyrS tyrosyl-tRNA sy 20.5 1E+02 0.0022 28.3 3.1 34 10-44 35-71 (377)
309 PRK02910 light-independent pro 20.4 1.8E+02 0.0038 28.2 4.8 27 116-145 361-387 (519)
310 PF08030 NAD_binding_6: Ferric 20.3 51 0.0011 25.5 1.0 40 281-320 3-47 (156)
311 PRK13608 diacylglycerol glucos 20.3 1.9E+02 0.0041 26.6 4.9 35 8-42 6-44 (391)
312 PRK00784 cobyric acid synthase 20.1 1.6E+02 0.0035 28.1 4.5 35 9-43 4-39 (488)
313 PRK07236 hypothetical protein; 20.1 2.1E+02 0.0047 26.1 5.2 37 1-43 1-37 (386)
314 TIGR00288 conserved hypothetic 20.1 1.6E+02 0.0034 23.4 3.6 40 9-53 108-148 (160)
315 CHL00194 ycf39 Ycf39; Provisio 20.0 1.1E+02 0.0023 27.2 3.1 31 9-43 2-32 (317)
No 1
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=4.2e-63 Score=455.03 Aligned_cols=358 Identities=56% Similarity=1.036 Sum_probs=262.3
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENC 85 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 85 (363)
++.||+++|+|++||++||++||+.|+.||+.|||++|+.+..++.+........+..|+|+.+|+|...+++|++.+..
T Consensus 7 ~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~ 86 (491)
T PLN02534 7 KQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENL 86 (491)
T ss_pred CCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCcccc
Confidence 45799999999999999999999999999999999999987765554432111111249999999876556788765543
Q ss_pred CCCCChhH-HHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccccc
Q 039413 86 DLLPTTDF-ARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSKVH 164 (363)
Q Consensus 86 ~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
...+...+ ..+..++..+.+.+++++++...+++|||+|.|++|+.++|+++|||.++|++++++....++++......
T Consensus 87 ~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~ 166 (491)
T PLN02534 87 DTLPSRDLLRKFYDAVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAH 166 (491)
T ss_pred ccCCcHHHHHHHHHHHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhccc
Confidence 32222123 34445556678899999876435689999999999999999999999999999999887765544322211
Q ss_pred cCCCCCCCCcCCCCCCCCcccccCCCCCCCCC-ccHHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhhcCCceEEe
Q 039413 165 ENVTSDSDYFNIPGLPDHIQFTKVQLPISEQD-DDFKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKAKQEKVWCI 243 (363)
Q Consensus 165 ~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~~~~~v~~V 243 (363)
.....+..++.+||+|....++..+++.++.. .....+...+.....+++++++|||+|||++++++++...++++++|
T Consensus 167 ~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~V 246 (491)
T PLN02534 167 LSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCV 246 (491)
T ss_pred ccCCCCCceeecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEE
Confidence 11112223456889875445677888875432 23344444443333467899999999999999999987666789999
Q ss_pred CcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeCCcchh
Q 039413 244 GPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGESKLE 323 (363)
Q Consensus 244 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~~~~~~ 323 (363)
||++.......+....+.....++.+|++|||+|+++|||||||||...++.+|++|++.||++++++|||++|.+....
T Consensus 247 GPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~ 326 (491)
T PLN02534 247 GPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHS 326 (491)
T ss_pred CcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCcccc
Confidence 99975321110100001101112457999999999999999999999999999999999999999999999999542111
Q ss_pred hhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 324 ELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 324 ~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+..++.+|++|.++++++|+++.+|+||.+||+|++||||
T Consensus 327 ~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~f 366 (491)
T PLN02534 327 ELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGF 366 (491)
T ss_pred chhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceE
Confidence 1112117899999999999998899999999999999998
No 2
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.3e-60 Score=436.50 Aligned_cols=348 Identities=28% Similarity=0.453 Sum_probs=249.3
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCC
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCEN 84 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 84 (363)
..+.|||++|+|++||++||++||+.|++||+.|||++|+.+..++.+... .....|+++.+|++.. +++|++.+.
T Consensus 4 ~~~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~---~~~~~i~~~~lp~p~~-dglp~~~~~ 79 (472)
T PLN02670 4 EEVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPS---QLSSSITLVSFPLPSV-PGLPSSAES 79 (472)
T ss_pred CCCcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccc---cCCCCeeEEECCCCcc-CCCCCCccc
Confidence 356799999999999999999999999999999999999987655543211 0112489999997654 477765443
Q ss_pred CCCCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccccc
Q 039413 85 CDLLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSKVH 164 (363)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
...........+..+...+.+.+++++++ .+++|||+|.|++|+.++|+++|||.++|++++++..+.+++.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~ 157 (472)
T PLN02670 80 STDVPYTKQQLLKKAFDLLEPPLTTFLET--SKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEG 157 (472)
T ss_pred ccccchhhHHHHHHHHHHhHHHHHHHHHh--CCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhc
Confidence 22221000122334555778899999987 4689999999999999999999999999999999887766533211101
Q ss_pred cCCCCCCCCc-CCCCC-CC--CcccccCCCCCCCCCc----c-HHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhh
Q 039413 165 ENVTSDSDYF-NIPGL-PD--HIQFTKVQLPISEQDD----D-FKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKA 235 (363)
Q Consensus 165 ~~~~~~~~~~-~~p~~-~~--~~~~~~~~l~~~~~~~----~-~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~ 235 (363)
.......+.. .+|+. |. ...++..+++.++... . ...+. +....+.+++++++|||+|||+.+++++++.
T Consensus 158 ~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~ 236 (472)
T PLN02670 158 GDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSV-RFGFAIGGSDVVIIRSSPEFEPEWFDLLSDL 236 (472)
T ss_pred ccCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHH-HHHhhcccCCEEEEeCHHHHhHHHHHHHHHh
Confidence 1111111111 25554 21 1124556787755321 1 22233 2223456789999999999999999999876
Q ss_pred cCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEE
Q 039413 236 KQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWV 315 (363)
Q Consensus 236 ~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~ 315 (363)
.++++++|||++......... .... ....++|.+|||+++++|||||||||+..++.+|++|++.||++++++|||+
T Consensus 237 ~~~~v~~VGPl~~~~~~~~~~-~~~~--~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv 313 (472)
T PLN02670 237 YRKPIIPIGFLPPVIEDDEED-DTID--VKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWV 313 (472)
T ss_pred hCCCeEEEecCCccccccccc-cccc--cchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEE
Confidence 556899999997531100000 0000 0112579999999999999999999999999999999999999999999999
Q ss_pred EeCCcc-hhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 316 IRGESK-LEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 316 ~~~~~~-~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+|++.. ..+..+. +|+||.+|+++||+++.+|+||.+||+||+||+|
T Consensus 314 ~r~~~~~~~~~~~~-lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~F 361 (472)
T PLN02670 314 LRNEPGTTQNALEM-LPDGFEERVKGRGMIHVGWVPQVKILSHESVGGF 361 (472)
T ss_pred EcCCcccccchhhc-CChHHHHhccCCCeEEeCcCCHHHHhcCccccee
Confidence 996421 1111123 9999999999999998899999999999999998
No 3
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.7e-60 Score=437.34 Aligned_cols=353 Identities=33% Similarity=0.578 Sum_probs=259.9
Q ss_pred CCCC--CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCC
Q 039413 1 MASE--ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGL 78 (363)
Q Consensus 1 m~~~--~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (363)
|++. ..++||+++|||+|||++||++||+.|+.+|+.|||++|+.+.+++.+... ...+++++.+++|.. +++
T Consensus 1 ~~~~~~~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~----~~~~i~~~~lp~P~~-~~l 75 (477)
T PLN02863 1 MTELNKPAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLS----KHPSIETLVLPFPSH-PSI 75 (477)
T ss_pred CcccccCCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcc----cCCCeeEEeCCCCCc-CCC
Confidence 5443 468899999999999999999999999999999999999988766654321 113588888887654 478
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHh
Q 039413 79 PEGCENCDLLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLL 158 (363)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~ 158 (363)
|++.++.+..+...+..+..+...+.+.+++++++...+++|||+|.|++|+.++|+++|||.+.||+++++.++.++++
T Consensus 76 PdG~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~ 155 (477)
T PLN02863 76 PSGVENVKDLPPSGFPLMIHALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSL 155 (477)
T ss_pred CCCCcChhhcchhhHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHH
Confidence 88776543332111234445556677888888876444679999999999999999999999999999999999888776
Q ss_pred hccccccC-CCCCCCC---cCCCCCCCCcccccCCCCCCCCCc----cHHHHHHHHHHhhhcCceEEecCccccchhHHH
Q 039413 159 GVSKVHEN-VTSDSDY---FNIPGLPDHIQFTKVQLPISEQDD----DFKELQEQIFAADKKTYGTIINTFEELESPCIE 230 (363)
Q Consensus 159 ~~~~~~~~-~~~~~~~---~~~p~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~ 230 (363)
....+... ....... ..+||++. ++.++++.+++.. .......+.......++++++|||++||+.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~iPg~~~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~ 232 (477)
T PLN02863 156 WREMPTKINPDDQNEILSFSKIPNCPK---YPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLE 232 (477)
T ss_pred hhcccccccccccccccccCCCCCCCC---cChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHH
Confidence 53222110 0111112 24677764 7888888755421 122222222233456788999999999999999
Q ss_pred HHHhhcC-CceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 231 DYKKAKQ-EKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 231 ~~~~~~~-~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
+++..++ +++++|||+++...........+...+..+++|.+|||+++++|||||||||+..++.+|+++++.||++++
T Consensus 233 ~~~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~ 312 (477)
T PLN02863 233 HLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSG 312 (477)
T ss_pred HHHhhcCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCC
Confidence 9987664 689999999753211000000111111134689999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCcchh-hhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 310 KPFVWVIRGESKLE-ELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 310 ~~flW~~~~~~~~~-~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
++|||+++.+.... .... +|++|.+|++++|+++.+|+||.+||+|++|++|
T Consensus 313 ~~flw~~~~~~~~~~~~~~--lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~f 365 (477)
T PLN02863 313 VHFIWCVKEPVNEESDYSN--IPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAF 365 (477)
T ss_pred CcEEEEECCCcccccchhh--CCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeE
Confidence 99999998542211 1123 8999999999999998899999999999999998
No 4
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-59 Score=427.00 Aligned_cols=329 Identities=26% Similarity=0.397 Sum_probs=243.3
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENC 85 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 85 (363)
.+.||+++|+|++||++||++||+.|+.||+.|||+||+.+..++.+. . . ...++++..++++.. +++|++.+..
T Consensus 4 ~~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~-~-~--~~~~~~v~~~~~p~~-~glp~g~e~~ 78 (453)
T PLN02764 4 LKFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHL-N-L--FPHNIVFRSVTVPHV-DGLPVGTETV 78 (453)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhccc-c-c--CCCCceEEEEECCCc-CCCCCccccc
Confidence 568999999999999999999999999999999999998876544431 1 0 011233444444322 4777765543
Q ss_pred CCCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhcccccc
Q 039413 86 DLLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSKVHE 165 (363)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~ 165 (363)
...+...+..+..++..+.+.+++++++ .+++|||+|+ +.|+.++|+++|||.+.|++++++.++.++. . ..
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~--~~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~----~~ 150 (453)
T PLN02764 79 SEIPVTSADLLMSAMDLTRDQVEVVVRA--VEPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-P----GG 150 (453)
T ss_pred ccCChhHHHHHHHHHHHhHHHHHHHHHh--CCCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-c----cc
Confidence 3332111233445556678999999987 3679999995 8999999999999999999999988776542 1 10
Q ss_pred CCCCCCCCcCCCCCCC-CcccccCCCCCCCC--Cc----cHHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhhcCC
Q 039413 166 NVTSDSDYFNIPGLPD-HIQFTKVQLPISEQ--DD----DFKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKAKQE 238 (363)
Q Consensus 166 ~~~~~~~~~~~p~~~~-~~~~~~~~l~~~~~--~~----~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~~~~ 238 (363)
.. ...+||+|. .+.++.++++.+.. .. ....+..++.....+++++++|||+|||++++++++...++
T Consensus 151 ~~-----~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~ 225 (453)
T PLN02764 151 EL-----GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRK 225 (453)
T ss_pred cC-----CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCC
Confidence 00 122477763 11255566665321 11 12334444434567889999999999999999999875456
Q ss_pred ceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeC
Q 039413 239 KVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRG 318 (363)
Q Consensus 239 ~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~ 318 (363)
++++|||+++..... ...+.+|.+|||+|+++|||||||||...++.+|+.|++.||+.++++|+|++|.
T Consensus 226 ~v~~VGPL~~~~~~~----------~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~ 295 (453)
T PLN02764 226 KVLLTGPVFPEPDKT----------RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKP 295 (453)
T ss_pred cEEEeccCccCcccc----------ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 899999997532100 0124689999999999999999999999999999999999999999999999996
Q ss_pred CcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 319 ESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 319 ~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+...++.... +|+||++|++++|+++.+|+||.+||+||+||+|
T Consensus 296 ~~~~~~~~~~-lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~F 339 (453)
T PLN02764 296 PRGSSTIQEA-LPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCF 339 (453)
T ss_pred CCCCcchhhh-CCcchHhhhccCCcEEeCCCCHHHHhcCcccCeE
Confidence 4211111223 9999999999999999899999999999999998
No 5
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.5e-59 Score=429.48 Aligned_cols=332 Identities=28% Similarity=0.493 Sum_probs=242.1
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCC
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPE 80 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (363)
|+.+..+.||+++|+|++||++||++||+.|+.||+.|||++|+.+... .. ....+|++..+| +++|+
T Consensus 1 ~~~~~~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~--~~-----~~~~~i~~~~ip-----~glp~ 68 (451)
T PLN02410 1 MEEKPARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFS--PS-----DDFTDFQFVTIP-----ESLPE 68 (451)
T ss_pred CCcCCCCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccc--cc-----cCCCCeEEEeCC-----CCCCc
Confidence 7877778899999999999999999999999999999999999876421 11 011248888776 35665
Q ss_pred C-CCCCCCCCChhHHHHHHHH-HhchHHHHHHHHhC----CCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHH
Q 039413 81 G-CENCDLLPTTDFARFLNSL-HMLQLPFENLFERQ----TLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFC 154 (363)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~----~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~ 154 (363)
+ .+. .. ...+.... ..+.+.+++++++. ..+++|||+|.|++|+.++|+++|||.+.|++++++.++.
T Consensus 69 ~~~~~---~~---~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~ 142 (451)
T PLN02410 69 SDFKN---LG---PIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVC 142 (451)
T ss_pred ccccc---cC---HHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHH
Confidence 3 121 11 11222222 34556666666542 2457999999999999999999999999999999998877
Q ss_pred HHHhhccccc---cCCCC--CCCCcCCCCCCCCcccccCCCCCCCCCc--cHHHHHHHHHHhhhcCceEEecCccccchh
Q 039413 155 LHLLGVSKVH---ENVTS--DSDYFNIPGLPDHIQFTKVQLPISEQDD--DFKELQEQIFAADKKTYGTIINTFEELESP 227 (363)
Q Consensus 155 ~~~~~~~~~~---~~~~~--~~~~~~~p~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~l~nt~~~le~~ 227 (363)
++++...... .+... .+....+||++. ++..+++.+.... .....+.... .+.+++++++|||+|||++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~---~~~~dlp~~~~~~~~~~~~~~~~~~-~~~~~~~vlvNTf~eLE~~ 218 (451)
T PLN02410 143 RSVFDKLYANNVLAPLKEPKGQQNELVPEFHP---LRCKDFPVSHWASLESIMELYRNTV-DKRTASSVIINTASCLESS 218 (451)
T ss_pred HHHHHHHHhccCCCCccccccCccccCCCCCC---CChHHCcchhcCCcHHHHHHHHHHh-hcccCCEEEEeChHHhhHH
Confidence 6654321100 01001 112345888875 6777777643221 1222222222 3467899999999999999
Q ss_pred HHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhh
Q 039413 228 CIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEA 307 (363)
Q Consensus 228 ~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~ 307 (363)
+++++++..++++++|||+++..... ...+....+|.+|||+|+++|||||||||+..++.+|++|++.||++
T Consensus 219 ~~~~l~~~~~~~v~~vGpl~~~~~~~-------~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~ 291 (451)
T PLN02410 219 SLSRLQQQLQIPVYPIGPLHLVASAP-------TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDS 291 (451)
T ss_pred HHHHHHhccCCCEEEecccccccCCC-------ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHh
Confidence 99999886667899999998643211 01112345799999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeCCcch-hhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 308 SNKPFVWVIRGESKL-EELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 308 ~~~~flW~~~~~~~~-~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
++++|||++|.+... .+..+. +|++|+||+++||+++ +|+||.+||+||+||+|
T Consensus 292 s~~~FlWv~r~~~~~~~~~~~~-lp~~f~er~~~~g~v~-~w~PQ~~iL~h~~v~~f 346 (451)
T PLN02410 292 SNQQFLWVIRPGSVRGSEWIES-LPKEFSKIISGRGYIV-KWAPQKEVLSHPAVGGF 346 (451)
T ss_pred cCCCeEEEEccCcccccchhhc-CChhHHHhccCCeEEE-ccCCHHHHhCCCccCee
Confidence 999999999954211 111122 8999999999999988 89999999999999998
No 6
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=1.4e-59 Score=430.01 Aligned_cols=331 Identities=24% Similarity=0.333 Sum_probs=244.1
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHH-hCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLA-QRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCEN 84 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La-~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 84 (363)
.++||+++|+|++||++||++||+.|+ ++|++|||++|+.+..++.+... ...+|++..+|++.. +++++...
T Consensus 4 ~~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~----~~~~i~~~~lp~p~~-~glp~~~~- 77 (481)
T PLN02992 4 TKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFL----NSTGVDIVGLPSPDI-SGLVDPSA- 77 (481)
T ss_pred CCcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccc----cCCCceEEECCCccc-cCCCCCCc-
Confidence 457999999999999999999999998 78999999999877654422110 112488888886543 24442110
Q ss_pred CCCCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccc-c
Q 039413 85 CDLLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSK-V 163 (363)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~-~ 163 (363)
.....+..+...+.+.+++++++...+++|||+|.|++|+.++|+++|||.+.|++++++.++.+.+.+... .
T Consensus 78 ------~~~~~~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~ 151 (481)
T PLN02992 78 ------HVVTKIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKD 151 (481)
T ss_pred ------cHHHHHHHHHHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccc
Confidence 011223334445678888888764456899999999999999999999999999999998877665544211 1
Q ss_pred cc-CCCCCCCCcCCCCCCCCcccccCCCCCCCCC-cc-HHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhh-----
Q 039413 164 HE-NVTSDSDYFNIPGLPDHIQFTKVQLPISEQD-DD-FKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKA----- 235 (363)
Q Consensus 164 ~~-~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~-~~-~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~----- 235 (363)
.. .......+..+||++. ++..+++..+.. .. ....+.+....+.+++++++|||+|||++++++++..
T Consensus 152 ~~~~~~~~~~~~~iPg~~~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~ 228 (481)
T PLN02992 152 IKEEHTVQRKPLAMPGCEP---VRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGR 228 (481)
T ss_pred cccccccCCCCcccCCCCc---cCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhcccccc
Confidence 11 0001112456888875 677888853322 21 1222233334467899999999999999999998752
Q ss_pred -cCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEE
Q 039413 236 -KQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVW 314 (363)
Q Consensus 236 -~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW 314 (363)
..+++++|||++.... . ...+.+|.+|||+|+++|||||||||+..++.+|++|++.||++++++|||
T Consensus 229 ~~~~~v~~VGPl~~~~~-~----------~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW 297 (481)
T PLN02992 229 VARVPVYPIGPLCRPIQ-S----------SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVW 297 (481)
T ss_pred ccCCceEEecCccCCcC-C----------CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEE
Confidence 1257999999975311 0 013467999999999999999999999999999999999999999999999
Q ss_pred EEeCCcch---------------hhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 315 VIRGESKL---------------EELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 315 ~~~~~~~~---------------~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
++|++... ++..+. +|+||.||++++|+++.+|+||.+||+|++||+|
T Consensus 298 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~F 360 (481)
T PLN02992 298 VVRPPVDGSACSAYFSANGGETRDNTPEY-LPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGF 360 (481)
T ss_pred EEeCCcccccccccccCcccccccchhhh-CCHHHHHHhcCCCEEEeecCCHHHHhCCcccCee
Confidence 99853110 111233 8999999999999999899999999999999998
No 7
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=2.8e-59 Score=427.13 Aligned_cols=328 Identities=26% Similarity=0.397 Sum_probs=241.3
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENC 85 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 85 (363)
+++||+++|+|++||++||++||+.|++||++|||+|++.+..++.+... ....+++..+++|.. +++|++.+..
T Consensus 3 ~~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~----~~~~i~~~~i~lP~~-dGLP~g~e~~ 77 (446)
T PLN00414 3 SKFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNL----FPDSIVFEPLTLPPV-DGLPFGAETA 77 (446)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhccccc----CCCceEEEEecCCCc-CCCCCccccc
Confidence 56799999999999999999999999999999999999876655433210 112488877766543 4777764332
Q ss_pred CCCCChhH-HHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccccc
Q 039413 86 DLLPTTDF-ARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSKVH 164 (363)
Q Consensus 86 ~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
..... .. ..+..+...+.+.++++++. .++||||+|. ++|+.++|+++|||.+.|++++++..+.+++...
T Consensus 78 ~~l~~-~~~~~~~~a~~~l~~~l~~~L~~--~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~---- 149 (446)
T PLN00414 78 SDLPN-STKKPIFDAMDLLRDQIEAKVRA--LKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRA---- 149 (446)
T ss_pred ccchh-hHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHh----
Confidence 22211 11 23445556678888888875 4689999995 8999999999999999999999988776654110
Q ss_pred cCCCCCCCCcCCCCCCC-CcccccCC--CCCCCCCccHHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhhcCCceE
Q 039413 165 ENVTSDSDYFNIPGLPD-HIQFTKVQ--LPISEQDDDFKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKAKQEKVW 241 (363)
Q Consensus 165 ~~~~~~~~~~~~p~~~~-~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~~~~~v~ 241 (363)
.. ...+||+|. ...++..+ ++.++... ...+.+......+++++++|||+|||+.+++++++..+++++
T Consensus 150 -~~-----~~~~pg~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~ 221 (446)
T PLN00414 150 -EL-----GFPPPDYPLSKVALRGHDANVCSLFANS--HELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVL 221 (446)
T ss_pred -hc-----CCCCCCCCCCcCcCchhhcccchhhccc--HHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeE
Confidence 00 012466653 11123232 22333211 122333334567899999999999999999999876556799
Q ss_pred EeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeCCcc
Q 039413 242 CIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGESK 321 (363)
Q Consensus 242 ~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~~~~ 321 (363)
+|||++...... . + ...+.+|.+|||+|+++|||||||||...++.+|+.|++.||+.++++|||++|.+..
T Consensus 222 ~VGPl~~~~~~~-~----~---~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~ 293 (446)
T PLN00414 222 LTGPMLPEPQNK-S----G---KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKG 293 (446)
T ss_pred EEcccCCCcccc-c----C---cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Confidence 999997532110 0 0 1124579999999999999999999999999999999999999999999999997522
Q ss_pred hhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 322 LEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 322 ~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
.++..++ +|+||++|++++|+|+.+|+||.+||+|++||+|
T Consensus 294 ~~~~~~~-lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~f 334 (446)
T PLN00414 294 SSTVQEA-LPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCF 334 (446)
T ss_pred cccchhh-CChhHHHHhcCCCeEEeccCCHHHHhcCCccceE
Confidence 1111233 9999999999999999899999999999999998
No 8
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=5.4e-59 Score=424.80 Aligned_cols=328 Identities=25% Similarity=0.362 Sum_probs=244.4
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENC 85 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 85 (363)
.++|++++|+|++||++||++||+.|++|||+|||+|+..+..++.+.. .....+++..++++.. +++|++.+..
T Consensus 3 ~~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~----a~~~~i~~~~l~~p~~-dgLp~g~~~~ 77 (442)
T PLN02208 3 PKFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHN----LFPDSIVFHPLTIPPV-NGLPAGAETT 77 (442)
T ss_pred CCCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhccc----CCCCceEEEEeCCCCc-cCCCCCcccc
Confidence 4579999999999999999999999999999999999887655543311 0112477777765422 4677664422
Q ss_pred CCCCChhH-HHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccccc
Q 039413 86 DLLPTTDF-ARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSKVH 164 (363)
Q Consensus 86 ~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
.... ..+ ..+..+...+.+.+++++++ .++||||+| ++.|+.++|+++|||++.||+++++.++ +++.+.
T Consensus 78 ~~l~-~~l~~~~~~~~~~~~~~l~~~L~~--~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~---- 148 (442)
T PLN02208 78 SDIP-ISMDNLLSEALDLTRDQVEAAVRA--LRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG---- 148 (442)
T ss_pred cchh-HHHHHHHHHHHHHHHHHHHHHHhh--CCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----
Confidence 1111 122 23344556678889998876 478999999 6899999999999999999999988654 443321
Q ss_pred cCCCCCCCCcCCCCCCC-CcccccCCCCCCCCCcc-HHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhhcCCceEE
Q 039413 165 ENVTSDSDYFNIPGLPD-HIQFTKVQLPISEQDDD-FKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKAKQEKVWC 242 (363)
Q Consensus 165 ~~~~~~~~~~~~p~~~~-~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~~~~~v~~ 242 (363)
... ...+||+|. .+.++..+++.+..... +..+...+.....+++++++|||+|||+++++++++.+++++++
T Consensus 149 ~~~-----~~~~pglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~ 223 (442)
T PLN02208 149 GKL-----GVPPPGYPSSKVLFRENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLL 223 (442)
T ss_pred ccc-----CCCCCCCCCcccccCHHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEE
Confidence 000 112578774 22356677775421111 23333333344568999999999999999999998877789999
Q ss_pred eCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeCCcch
Q 039413 243 IGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGESKL 322 (363)
Q Consensus 243 VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~~~~~ 322 (363)
|||+++.+... ..++.+|++|||+|+++|||||||||+..++.+|+.|++.+|+.++++|+|+||.+...
T Consensus 224 vGpl~~~~~~~----------~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~ 293 (442)
T PLN02208 224 TGPMFPEPDTS----------KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGS 293 (442)
T ss_pred EeecccCcCCC----------CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcc
Confidence 99998642200 12467899999999999999999999999999999999999999999999999964211
Q ss_pred hhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 323 EELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 323 ~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
.+..+. +|+||.+|++++|+++.+|+||.+||+||+||+|
T Consensus 294 ~~~~~~-lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~F 333 (442)
T PLN02208 294 STVQEG-LPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCF 333 (442)
T ss_pred cchhhh-CCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeE
Confidence 111122 9999999999999999899999999999999998
No 9
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=7.3e-59 Score=422.86 Aligned_cols=332 Identities=27% Similarity=0.404 Sum_probs=244.8
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCCChhhh--HHHhhhhhccCCceeEEEecCCCccCCC-CCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPVNAARF--KTVHARAIDSGLQIRLIEIQFPWQQAGL-PEG 81 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~ 81 (363)
.++|++++|+|++||++||++||+.|++| |..|||+++..+...+ ........ ....|+++.+|++.. +++ +.+
T Consensus 2 ~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~-~~~~i~~~~lp~~~~-~~l~~~~ 79 (470)
T PLN03015 2 DQPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAA-ARTTCQITEIPSVDV-DNLVEPD 79 (470)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhcccccccccc-CCCceEEEECCCCcc-ccCCCCC
Confidence 45699999999999999999999999987 9999999987655433 11111110 112488988885432 233 111
Q ss_pred CCCCCCCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCC-cEEEecccHHHHHHHHHhhc
Q 039413 82 CENCDLLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVP-RIIFHEFSCFCLFCLHLLGV 160 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP-~v~~~~~~~~~~~~~~~~~~ 160 (363)
......+..+...+.+.+++++++...+++|||+|.|++|+.++|+++||| .+.|++++++....+++++.
T Consensus 80 --------~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~ 151 (470)
T PLN03015 80 --------ATIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPV 151 (470)
T ss_pred --------ccHHHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhh
Confidence 011134555556778899999987544689999999999999999999999 68888998887766666543
Q ss_pred cc-cccC-CCCCCCCcCCCCCCCCcccccCCCCCCCCCc-c--HHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhh
Q 039413 161 SK-VHEN-VTSDSDYFNIPGLPDHIQFTKVQLPISEQDD-D--FKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKA 235 (363)
Q Consensus 161 ~~-~~~~-~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~-~--~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~ 235 (363)
.. .... .....+++.+||+|. ++..++|.++... . +..+.... ..+.+++++++|||+|||+.+++++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~vPg~p~---l~~~dlp~~~~~~~~~~~~~~~~~~-~~~~~a~gvlvNTf~eLE~~~~~~l~~~ 227 (470)
T PLN03015 152 LDTVVEGEYVDIKEPLKIPGCKP---VGPKELMETMLDRSDQQYKECVRSG-LEVPMSDGVLVNTWEELQGNTLAALRED 227 (470)
T ss_pred hhcccccccCCCCCeeeCCCCCC---CChHHCCHhhcCCCcHHHHHHHHHH-HhcccCCEEEEechHHHhHHHHHHHHhh
Confidence 21 1111 001123456899875 7888888644322 1 23333333 3467899999999999999999999874
Q ss_pred c------CCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 236 K------QEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 236 ~------~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
+ .+++++|||++.... . ...+++|.+|||+|+++|||||||||+..++.+|++|++.||++++
T Consensus 228 ~~~~~~~~~~v~~VGPl~~~~~-~----------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~ 296 (470)
T PLN03015 228 MELNRVMKVPVYPIGPIVRTNV-H----------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSG 296 (470)
T ss_pred cccccccCCceEEecCCCCCcc-c----------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCC
Confidence 2 257999999974211 0 0123579999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCcc--------hhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 310 KPFVWVIRGESK--------LEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 310 ~~flW~~~~~~~--------~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
++|||++|.+.. .++..++ +|+||.+|++++|+++.+|+||.+||+||+||+|
T Consensus 297 ~~FlWv~r~~~~~~~~~~~~~~~~~~~-lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~f 357 (470)
T PLN03015 297 QRFVWVLRRPASYLGASSSDDDQVSAS-LPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGF 357 (470)
T ss_pred CcEEEEEecCccccccccccccchhhc-CChHHHHhhccCceEEEecCCHHHHhccCccCeE
Confidence 999999985311 0112234 9999999999999988899999999999999998
No 10
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.1e-58 Score=422.00 Aligned_cols=338 Identities=25% Similarity=0.425 Sum_probs=239.3
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCC--CEEEE--EeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRG--AIVTI--VTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGC 82 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rG--h~VT~--~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 82 (363)
+.||+++|+|++||++||++||++|+.|| +.||+ +++..+...+...........++|+++.+|++. ..+.+.
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~---~~~~~~ 79 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVT---PYSSSS 79 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCC---CCCCcc
Confidence 34999999999999999999999999998 55665 444432222221111111111358999887431 111111
Q ss_pred CCCCCCCChhH-HHHHHHHHhchHHHHHHHHhC--CCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhh
Q 039413 83 ENCDLLPTTDF-ARFLNSLHMLQLPFENLFERQ--TLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLG 159 (363)
Q Consensus 83 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~--~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~ 159 (363)
. .. ... ..+..+...+.+.+++++++. +.+++|||+|.|++|+.++|+++|||.+.|++++++.++.+.+++
T Consensus 80 ~--~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~ 154 (451)
T PLN03004 80 T--SR---HHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLP 154 (451)
T ss_pred c--cc---cCHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHH
Confidence 1 10 111 223334445667777877754 134699999999999999999999999999999999888877654
Q ss_pred ccccccCC-C-CCCCCcCCCCCCCCcccccCCCCCCCCCcc--HHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhh
Q 039413 160 VSKVHENV-T-SDSDYFNIPGLPDHIQFTKVQLPISEQDDD--FKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKA 235 (363)
Q Consensus 160 ~~~~~~~~-~-~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~ 235 (363)
........ . .+..++.+||+|. ++..++|.++.... ...++.+....+.+++++++|||++||+.++++++..
T Consensus 155 ~~~~~~~~~~~~~~~~v~iPg~p~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~ 231 (451)
T PLN03004 155 TIDETTPGKNLKDIPTVHIPGVPP---MKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEE 231 (451)
T ss_pred hccccccccccccCCeecCCCCCC---CChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhc
Confidence 32100000 0 1112356889885 78888998664322 2233334444567789999999999999999999875
Q ss_pred cC-CceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEE
Q 039413 236 KQ-EKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVW 314 (363)
Q Consensus 236 ~~-~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW 314 (363)
.. +++++|||++...... . .. ...+.+|++|||+|+++|||||||||+..++.+|++||+.||++++++|||
T Consensus 232 ~~~~~v~~vGPl~~~~~~~-~----~~--~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW 304 (451)
T PLN03004 232 LCFRNIYPIGPLIVNGRIE-D----RN--DNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLW 304 (451)
T ss_pred CCCCCEEEEeeeccCcccc-c----cc--cchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEE
Confidence 32 5899999997432100 0 00 012357999999999999999999999999999999999999999999999
Q ss_pred EEeCCcch----hhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 315 VIRGESKL----EELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 315 ~~~~~~~~----~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
++|.+... .+..++ +|++|+||++++|+++.+|+||.+||+|++||+|
T Consensus 305 ~~r~~~~~~~~~~~~~~~-lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~F 356 (451)
T PLN03004 305 VVRNPPELEKTELDLKSL-LPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGF 356 (451)
T ss_pred EEcCCccccccccchhhh-CChHHHHhccCCcEEEEeeCCHHHHhCCCccceE
Confidence 99964210 012233 8999999999999998899999999999999998
No 11
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=2e-57 Score=422.01 Aligned_cols=355 Identities=43% Similarity=0.801 Sum_probs=250.8
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhh--ccCCceeEEEecCCCccCCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAI--DSGLQIRLIEIQFPWQQAGLPEGCE 83 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~ 83 (363)
++.||+++|+|++||++|+++||++|++||++|||++++.+..++++...... ..+..+++..++++..++++|++.+
T Consensus 4 ~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e 83 (482)
T PLN03007 4 EKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCE 83 (482)
T ss_pred CCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCcc
Confidence 45799999999999999999999999999999999999987765554322110 0111245666666544346776654
Q ss_pred CCCCCC------ChhH-HHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHH
Q 039413 84 NCDLLP------TTDF-ARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLH 156 (363)
Q Consensus 84 ~~~~~~------~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~ 156 (363)
.....+ ...+ ..+......+.+.+++++++ .++||||+|.++.|+.++|+++|||.+.||+++++....++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~--~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~ 161 (482)
T PLN03007 84 NVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLET--TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASY 161 (482)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHH
Confidence 332110 0122 23334445667788888876 57899999999999999999999999999999998877665
Q ss_pred HhhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhhc
Q 039413 157 LLGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKAK 236 (363)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~~ 236 (363)
.+....+.........+..+||+|..+.++..+++..-....+..+.........+++++++|||++||+++++++++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~ 241 (482)
T PLN03007 162 CIRVHKPQKKVASSSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFV 241 (482)
T ss_pred HHHhcccccccCCCCceeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhcc
Confidence 44322111111111123347888743335555666431111123333344445678899999999999999999988766
Q ss_pred CCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEE
Q 039413 237 QEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVI 316 (363)
Q Consensus 237 ~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~ 316 (363)
..++++|||+............++...+..+.+|.+|||+++++|||||||||+..++.+|+.+++.||+.++++|||++
T Consensus 242 ~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~ 321 (482)
T PLN03007 242 AKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVV 321 (482)
T ss_pred CCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 56799999986532211000000111112357899999999999999999999999999999999999999999999999
Q ss_pred eCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 317 RGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 317 ~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+.+....+..+. +|++|.+|+.++|+++.+|+||.+||+|++||+|
T Consensus 322 ~~~~~~~~~~~~-lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~f 367 (482)
T PLN03007 322 RKNENQGEKEEW-LPEGFEERTKGKGLIIRGWAPQVLILDHQATGGF 367 (482)
T ss_pred ecCCcccchhhc-CCHHHHHHhccCCEEEecCCCHHHHhccCcccee
Confidence 975321111122 8999999999999999899999999999999998
No 12
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.8e-57 Score=417.21 Aligned_cols=344 Identities=26% Similarity=0.441 Sum_probs=245.9
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH--h-hh-hhccC-CceeEEEecCCCcc
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTV--H-AR-AIDSG-LQIRLIEIQFPWQQ 75 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~--~-~~-~~~~~-~~i~~~~~~~~~~~ 75 (363)
|.++..++||+++|+|+|||++||++||+.|+.||..|||++|+.+..++... . +. ....+ ..++|..+|
T Consensus 1 ~~~~~~~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~p----- 75 (480)
T PLN02555 1 MESESSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFE----- 75 (480)
T ss_pred CCCCCCCCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCC-----
Confidence 77777889999999999999999999999999999999999998766554321 1 10 00000 124444443
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHH-HhchHHHHHHHHhC---CCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHH
Q 039413 76 AGLPEGCENCDLLPTTDFARFLNSL-HMLQLPFENLFERQ---TLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFC 151 (363)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~---~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~ 151 (363)
+++|++.+.. .++..++..+ ..+.+.+++++++. ..+++|||+|.|+.|+.++|+++|||.++|++++++.
T Consensus 76 dglp~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~ 150 (480)
T PLN02555 76 DGWAEDDPRR-----QDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCAC 150 (480)
T ss_pred CCCCCCcccc-----cCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHH
Confidence 4676554321 1222233333 24567778777653 2345999999999999999999999999999999999
Q ss_pred HHHHHHhhccc-cccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCc-cH---HHHHHHHHHhhhcCceEEecCccccch
Q 039413 152 LFCLHLLGVSK-VHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDD-DF---KELQEQIFAADKKTYGTIINTFEELES 226 (363)
Q Consensus 152 ~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~-~~---~~~~~~~~~~~~~~~~~l~nt~~~le~ 226 (363)
+..++++.... ........+.++.+||+|. ++.+++|.++... .. ...+.+......+++++++|||++||+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~iPglp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~ 227 (480)
T PLN02555 151 FSAYYHYYHGLVPFPTETEPEIDVQLPCMPL---LKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEK 227 (480)
T ss_pred HHHHHHHhhcCCCcccccCCCceeecCCCCC---cCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhH
Confidence 88877663211 1111111112346899985 7888998865421 11 122222233456889999999999999
Q ss_pred hHHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHh
Q 039413 227 PCIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLE 306 (363)
Q Consensus 227 ~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~ 306 (363)
.+++++++.. + +++|||++........ ..+...+..+++|.+|||+++++|||||||||+..++.+|+++++.||+
T Consensus 228 ~~~~~l~~~~-~-v~~iGPl~~~~~~~~~--~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~ 303 (480)
T PLN02555 228 EIIDYMSKLC-P-IKPVGPLFKMAKTPNS--DVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVL 303 (480)
T ss_pred HHHHHHhhCC-C-EEEeCcccCccccccc--cccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHH
Confidence 9999987643 4 9999999754211100 0011112245789999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEeCCcchhhh-hhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 307 ASNKPFVWVIRGESKLEEL-EKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 307 ~~~~~flW~~~~~~~~~~~-~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+++++|||+++......+. .+. +|++|.+++++||+++ +|+||.+||+||+||+|
T Consensus 304 ~~~~~flW~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~v~-~W~PQ~~iL~H~~v~~F 359 (480)
T PLN02555 304 NSGVSFLWVMRPPHKDSGVEPHV-LPEEFLEKAGDKGKIV-QWCPQEKVLAHPSVACF 359 (480)
T ss_pred hcCCeEEEEEecCcccccchhhc-CChhhhhhcCCceEEE-ecCCHHHHhCCCccCeE
Confidence 9999999999853211001 122 8999999999999888 89999999999999998
No 13
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2.6e-57 Score=419.05 Aligned_cols=334 Identities=27% Similarity=0.440 Sum_probs=244.4
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCC----CEEEEEeCCCChh----hhHHHhhhhhccCCceeEEEecCCCccCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRG----AIVTIVTTPVNAA----RFKTVHARAIDSGLQIRLIEIQFPWQQAG 77 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rG----h~VT~~t~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (363)
.+.|||++|+|++||++||++||+.|+.|| +.|||+++..+.. ++.....+.......|+++.+|++ .
T Consensus 2 ~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~ 77 (480)
T PLN00164 2 AAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAV----E 77 (480)
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCC----C
Confidence 456999999999999999999999999997 7999999876432 333322111111124888888743 1
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHH
Q 039413 78 LPEGCENCDLLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHL 157 (363)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~ 157 (363)
++++.+.. . ..+......+.+.+++++++...+++|||+|.|++|+.++|+++|||.+.|++++++.++.+++
T Consensus 78 ~p~~~e~~------~-~~~~~~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~ 150 (480)
T PLN00164 78 PPTDAAGV------E-EFISRYIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLR 150 (480)
T ss_pred CCCccccH------H-HHHHHHHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhh
Confidence 23222110 0 1222234467788888887643457999999999999999999999999999999998887776
Q ss_pred hhcccccc--CCCCCCCCcCCCCCCCCcccccCCCCCCCCCcc---HHHHHHHHHHhhhcCceEEecCccccchhHHHHH
Q 039413 158 LGVSKVHE--NVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDD---FKELQEQIFAADKKTYGTIINTFEELESPCIEDY 232 (363)
Q Consensus 158 ~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~ 232 (363)
++...... .......++.+||++. ++..++|.++.... ...+. .....+.+++++++|||+|||+.+++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~iPGlp~---l~~~dlp~~~~~~~~~~~~~~~-~~~~~~~~~~~vlvNTf~eLE~~~~~~~ 226 (480)
T PLN00164 151 LPALDEEVAVEFEEMEGAVDVPGLPP---VPASSLPAPVMDKKSPNYAWFV-YHGRRFMEAAGIIVNTAAELEPGVLAAI 226 (480)
T ss_pred hhhhcccccCcccccCcceecCCCCC---CChHHCCchhcCCCcHHHHHHH-HHHHhhhhcCEEEEechHHhhHHHHHHH
Confidence 64321100 0111012345888875 78888987554321 22222 2234457899999999999999999999
Q ss_pred Hhhc------CCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHh
Q 039413 233 KKAK------QEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLE 306 (363)
Q Consensus 233 ~~~~------~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~ 306 (363)
+... .+++++|||++...... .....+.+|.+|||+++++|||||||||+..++.+|+++++.||+
T Consensus 227 ~~~~~~~~~~~~~v~~vGPl~~~~~~~--------~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~ 298 (480)
T PLN00164 227 ADGRCTPGRPAPTVYPIGPVISLAFTP--------PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLE 298 (480)
T ss_pred HhccccccCCCCceEEeCCCccccccC--------CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHH
Confidence 8642 15899999997532111 001245789999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEeCCcc-------hhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 307 ASNKPFVWVIRGESK-------LEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 307 ~~~~~flW~~~~~~~-------~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+++++|||+++.+.. ..+..++ +|+||.+|++++|+++.+|+||.+||+|++||+|
T Consensus 299 ~s~~~flWv~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~f 361 (480)
T PLN00164 299 RSGHRFLWVLRGPPAAGSRHPTDADLDEL-LPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGF 361 (480)
T ss_pred HcCCCEEEEEcCCcccccccccccchhhh-CChHHHHHhcCCCeEEeecCCHHHHhcCcccCeE
Confidence 999999999995421 0112234 8999999999999999899999999999999998
No 14
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=3.7e-57 Score=413.35 Aligned_cols=336 Identities=23% Similarity=0.399 Sum_probs=240.7
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCC--CEEEEEeCCCCh-hhhHHHhhhhhccCCceeEEEecCCCccCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRG--AIVTIVTTPVNA-ARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGC 82 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rG--h~VT~~t~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 82 (363)
++.||+++|+|++||++||++||+.|+.|| ..|||++++.+. ..+....+......+.++|+.+|.... .++.
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~---~~~~- 77 (468)
T PLN02207 2 RNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEE---KPTL- 77 (468)
T ss_pred CCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCC---CCcc-
Confidence 457999999999999999999999999998 999999998765 223222221111112589998883210 1110
Q ss_pred CCCCCCCChhH-HHHHHHHHhc----hHHHHHHHHhCC---CCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHH
Q 039413 83 ENCDLLPTTDF-ARFLNSLHML----QLPFENLFERQT---LKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFC 154 (363)
Q Consensus 83 ~~~~~~~~~~~-~~~~~~~~~~----~~~~~~ll~~~~---~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~ 154 (363)
. . . .+. ..+...+..+ .+.+++++++.. .+++|||+|.|++|+.++|+++|||.++|++++++.++.
T Consensus 78 ~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~ 152 (468)
T PLN02207 78 G---G-T-QSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAM 152 (468)
T ss_pred c---c-c-cCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHH
Confidence 0 0 0 122 2233333333 556777776431 235999999999999999999999999999999988877
Q ss_pred HHHhhccc-cccCC--CCCCCCcCCCCC-CCCcccccCCCCCCCCCcc-HHHHHHHHHHhhhcCceEEecCccccchhHH
Q 039413 155 LHLLGVSK-VHENV--TSDSDYFNIPGL-PDHIQFTKVQLPISEQDDD-FKELQEQIFAADKKTYGTIINTFEELESPCI 229 (363)
Q Consensus 155 ~~~~~~~~-~~~~~--~~~~~~~~~p~~-~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~ 229 (363)
+++++... ..... ...+.++.+||+ +. ++..++|.++.... +..+. +....+.+++++++|||++||.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~vPgl~~~---l~~~dlp~~~~~~~~~~~~~-~~~~~~~~~~~vlvNtf~~LE~~~~ 228 (468)
T PLN02207 153 MQYLADRHSKDTSVFVRNSEEMLSIPGFVNP---VPANVLPSALFVEDGYDAYV-KLAILFTKANGILVNSSFDIEPYSV 228 (468)
T ss_pred HHHhhhccccccccCcCCCCCeEECCCCCCC---CChHHCcchhcCCccHHHHH-HHHHhcccCCEEEEEchHHHhHHHH
Confidence 76654321 11001 111133568998 43 78889997654322 33333 3333567899999999999999999
Q ss_pred HHHHh-hcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhC
Q 039413 230 EDYKK-AKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEAS 308 (363)
Q Consensus 230 ~~~~~-~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~ 308 (363)
++++. ...+++++|||+++......+. . . ...+++|++|||+|+++|||||||||++.++.+|+++++.||+++
T Consensus 229 ~~~~~~~~~p~v~~VGPl~~~~~~~~~~---~-~-~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~ 303 (468)
T PLN02207 229 NHFLDEQNYPSVYAVGPIFDLKAQPHPE---Q-D-LARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELC 303 (468)
T ss_pred HHHHhccCCCcEEEecCCcccccCCCCc---c-c-cchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHC
Confidence 99865 2337899999998643211110 0 0 012367999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 309 NKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 309 ~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+++|||++|.+... ..++ +|++|++|+++||+++ +|+||.+||+||+||+|
T Consensus 304 ~~~flW~~r~~~~~--~~~~-lp~~f~er~~~~g~i~-~W~PQ~~IL~H~~vg~F 354 (468)
T PLN02207 304 QYRFLWSLRTEEVT--NDDL-LPEGFLDRVSGRGMIC-GWSPQVEILAHKAVGGF 354 (468)
T ss_pred CCcEEEEEeCCCcc--cccc-CCHHHHhhcCCCeEEE-EeCCHHHHhccccccee
Confidence 99999999963210 1233 8999999999999888 89999999999999998
No 15
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=4e-57 Score=412.29 Aligned_cols=330 Identities=22% Similarity=0.396 Sum_probs=236.2
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHh-CCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQ-RGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENC 85 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~-rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 85 (363)
+.||+++|+|++||+|||++||+.|++ +|+.|||++|+.+.. +...... ...++++++.++ +++|++.+..
T Consensus 3 ~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~--~~~~~~~-~~~~~i~~~~i~-----dglp~g~~~~ 74 (455)
T PLN02152 3 PPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIH--RSMIPNH-NNVENLSFLTFS-----DGFDDGVISN 74 (455)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhh--hhhhccC-CCCCCEEEEEcC-----CCCCCccccc
Confidence 469999999999999999999999996 799999999975421 1111110 111258888875 4677653211
Q ss_pred CCCCChhH-HHHHHHHHhchHHHHHHHHhC---CCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhcc
Q 039413 86 DLLPTTDF-ARFLNSLHMLQLPFENLFERQ---TLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVS 161 (363)
Q Consensus 86 ~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~---~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~ 161 (363)
. ... ..+......+.+.+++++++. +.+++|||+|.+++|+.++|+++|||.+.|++++++.++.++++...
T Consensus 75 ~----~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 150 (455)
T PLN02152 75 T----DDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG 150 (455)
T ss_pred c----ccHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc
Confidence 1 122 233334445667788777653 13469999999999999999999999999999999998877665421
Q ss_pred ccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCc---c-HHHHHHHHHHhhh--cCceEEecCccccchhHHHHHHhh
Q 039413 162 KVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDD---D-FKELQEQIFAADK--KTYGTIINTFEELESPCIEDYKKA 235 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~---~-~~~~~~~~~~~~~--~~~~~l~nt~~~le~~~~~~~~~~ 235 (363)
....+.+||+|. ++.+++|.++... . ....+.+...... .++++++|||++||++++++++.
T Consensus 151 --------~~~~~~iPglp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~- 218 (455)
T PLN02152 151 --------NNSVFEFPNLPS---LEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN- 218 (455)
T ss_pred --------CCCeeecCCCCC---CchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc-
Confidence 012345888875 7788898866432 1 1222333333232 35799999999999999998865
Q ss_pred cCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEE
Q 039413 236 KQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWV 315 (363)
Q Consensus 236 ~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~ 315 (363)
.++++|||+++...............+..+.+|++|||+|+++|||||||||++.++.+|++|++.||++++++||||
T Consensus 219 --~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv 296 (455)
T PLN02152 219 --IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWV 296 (455)
T ss_pred --CCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEE
Confidence 269999999753210000000000011234589999999998999999999999999999999999999999999999
Q ss_pred EeCCcch-----hhhh-hccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 316 IRGESKL-----EELE-KWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 316 ~~~~~~~-----~~~~-~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+|++... .+.. ...+|++|.||+++||+|+ +|+||.+||+||+||+|
T Consensus 297 ~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~-~W~PQ~~iL~h~~vg~f 349 (455)
T PLN02152 297 ITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIV-SWCSQIEVLRHRAVGCF 349 (455)
T ss_pred EecCcccccccccccccccccchhHHHhccCCeEEE-eeCCHHHHhCCcccceE
Confidence 9963210 0000 1015799999999999988 89999999999999998
No 16
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.3e-56 Score=408.23 Aligned_cols=322 Identities=24% Similarity=0.413 Sum_probs=234.6
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCC-C
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGC-E 83 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~ 83 (363)
+++.|++++|+|++||++||++||+.|+.+|+.|||++|+.+.+++... ..++|+++.+| +++|++. +
T Consensus 3 ~~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~------~~~~i~~~~ip-----dglp~~~~~ 71 (449)
T PLN02173 3 KMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD------PSSPISIATIS-----DGYDQGGFS 71 (449)
T ss_pred CCCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC------CCCCEEEEEcC-----CCCCCcccc
Confidence 4567999999999999999999999999999999999998765543211 11358898886 4677632 2
Q ss_pred CCCCCCChhHHHHHHHH-HhchHHHHHHHHhCC---CCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhh
Q 039413 84 NCDLLPTTDFARFLNSL-HMLQLPFENLFERQT---LKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLG 159 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~---~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~ 159 (363)
... ....++.+. ..+.+.+++++++.. .+++|||+|.|++|+.++|+++|+|.+.|++++++.+..+++..
T Consensus 72 ~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~ 146 (449)
T PLN02173 72 SAG-----SVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSY 146 (449)
T ss_pred ccc-----CHHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHH
Confidence 211 122333333 356788888887531 23599999999999999999999999999999988776554321
Q ss_pred ccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCc-c---HHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhh
Q 039413 160 VSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDD-D---FKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKA 235 (363)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~-~---~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~ 235 (363)
.. ..+....+||+|. ++..++|.++... . ....+.+......+++++++|||+|||++++++++..
T Consensus 147 ~~-------~~~~~~~~pg~p~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~ 216 (449)
T PLN02173 147 IN-------NGSLTLPIKDLPL---LELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV 216 (449)
T ss_pred hc-------cCCccCCCCCCCC---CChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc
Confidence 10 0112345788875 6788898865431 1 1222222234467899999999999999999999753
Q ss_pred cCCceEEeCcCCCCCC--CCc-hhhhcCCCCC--CCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCC
Q 039413 236 KQEKVWCIGPVSLCNK--EPI-DKAERGKKAS--IDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNK 310 (363)
Q Consensus 236 ~~~~v~~VGpl~~~~~--~~~-~~~~~~~~~~--~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~ 310 (363)
+++++|||+++... ... .....+...+ ..+.+|.+|||+++++|||||||||+..++.+|++|++.|| +++
T Consensus 217 --~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~ 292 (449)
T PLN02173 217 --CPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNF 292 (449)
T ss_pred --CCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCC
Confidence 47999999975311 000 0000000111 22456999999999999999999999999999999999999 788
Q ss_pred CeEEEEeCCcchhhhhhccchhhHHHHhC-CCceEecCchhHHhhhcCCCCccC
Q 039413 311 PFVWVIRGESKLEELEKWLVEENFKERIK-GRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 311 ~flW~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+|||++|.+.. .. +|++|.++++ ++++++ +|+||.+||+||+||+|
T Consensus 293 ~flWvvr~~~~----~~--lp~~~~~~~~~~~~~i~-~W~PQ~~iL~H~~v~~F 339 (449)
T PLN02173 293 SYLWVVRASEE----SK--LPPGFLETVDKDKSLVL-KWSPQLQVLSNKAIGCF 339 (449)
T ss_pred CEEEEEeccch----hc--ccchHHHhhcCCceEEe-CCCCHHHHhCCCccceE
Confidence 99999996421 12 8999999995 455655 89999999999999998
No 17
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=3.4e-56 Score=408.68 Aligned_cols=328 Identities=23% Similarity=0.403 Sum_probs=240.7
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENC 85 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 85 (363)
.+.||+++|+|++||++||++||+.|++||++||++|++.+.+++.+... ...+|+++.+|. +++++.
T Consensus 5 ~~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~----~~~~i~~v~lp~-----g~~~~~--- 72 (448)
T PLN02562 5 QRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLD----PKLGITFMSISD-----GQDDDP--- 72 (448)
T ss_pred CCcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccC----CCCCEEEEECCC-----CCCCCc---
Confidence 55799999999999999999999999999999999999887655543211 112488888763 333211
Q ss_pred CCCCChhHHHHHHHHH-hchHHHHHHHHhCC--CCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccc
Q 039413 86 DLLPTTDFARFLNSLH-MLQLPFENLFERQT--LKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSK 162 (363)
Q Consensus 86 ~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~~--~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~ 162 (363)
+ ..+..+..++. .+.+.+++++++.. .+++|||+|.|+.|+.++|+++|||.+.||+++++.+..+++.+...
T Consensus 73 ---~-~~~~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~ 148 (448)
T PLN02562 73 ---P-RDFFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELV 148 (448)
T ss_pred ---c-ccHHHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHh
Confidence 1 12223334444 57788888887642 34689999999999999999999999999999988777665543221
Q ss_pred cc---cCCC--CCCCC-cCCCCCCCCcccccCCCCCCCCCc----cHHHHHHHHHHhhhcCceEEecCccccchhHHHHH
Q 039413 163 VH---ENVT--SDSDY-FNIPGLPDHIQFTKVQLPISEQDD----DFKELQEQIFAADKKTYGTIINTFEELESPCIEDY 232 (363)
Q Consensus 163 ~~---~~~~--~~~~~-~~~p~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~ 232 (363)
.. .... ....+ ..+||+|. ++..+++.++... .....+.+......+++++++|||+|||+.+++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~Pg~~~---l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~ 225 (448)
T PLN02562 149 RTGLISETGCPRQLEKICVLPEQPL---LSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNH 225 (448)
T ss_pred hccccccccccccccccccCCCCCC---CChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHH
Confidence 11 0000 01112 25788875 7778888765322 11222333334566789999999999999998877
Q ss_pred Hhh----cCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCc-CCChhHHHHHHHHHhh
Q 039413 233 KKA----KQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSIC-NLPSSQLIELGLGLEA 307 (363)
Q Consensus 233 ~~~----~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~-~l~~~~~~~~~~~l~~ 307 (363)
+.. ..+++++|||+++..... . .+......+.+|.+|||+++++|||||||||+. .++.+|+++++.||++
T Consensus 226 ~~~~~~~~~~~v~~iGpl~~~~~~~-~---~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~ 301 (448)
T PLN02562 226 QASYNNGQNPQILQIGPLHNQEATT-I---TKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEA 301 (448)
T ss_pred HhhhccccCCCEEEecCcccccccc-c---CCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHH
Confidence 642 347899999998643210 0 000111234679999999999999999999986 7899999999999999
Q ss_pred CCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 308 SNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 308 ~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
++++|||++|.+.. .. +|++|.+++++||+++ +|+||.+||+||+||+|
T Consensus 302 ~g~~fiW~~~~~~~----~~--l~~~~~~~~~~~~~v~-~w~PQ~~iL~h~~v~~f 350 (448)
T PLN02562 302 SGRPFIWVLNPVWR----EG--LPPGYVERVSKQGKVV-SWAPQLEVLKHQAVGCY 350 (448)
T ss_pred CCCCEEEEEcCCch----hh--CCHHHHHHhccCEEEE-ecCCHHHHhCCCccceE
Confidence 99999999986421 12 8999999999999988 89999999999999997
No 18
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=5.5e-55 Score=404.46 Aligned_cols=342 Identities=25% Similarity=0.395 Sum_probs=231.3
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCC---EEEEEeCCCChh-hhHHHhhhhhccCCceeEEEecCCCccCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGA---IVTIVTTPVNAA-RFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEG 81 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh---~VT~~t~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (363)
++.||++||+|++||++||++||+.|+.||. .||++++..+.. ..+..........++|+|+.+|++. + +++
T Consensus 2 ~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~---~-p~~ 77 (475)
T PLN02167 2 KEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQ---D-PPP 77 (475)
T ss_pred CccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCC---C-Ccc
Confidence 5679999999999999999999999999994 567766543322 1111111111111359999988542 1 211
Q ss_pred CCCCCCCCChhHHHHHHHHHhc----hHHHHHHHHhC---CC-CCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHH
Q 039413 82 CENCDLLPTTDFARFLNSLHML----QLPFENLFERQ---TL-KPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLF 153 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~---~~-~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~ 153 (363)
.+...... ...+......+ .+.+++++.+. +. +++|||+|.|++|+.++|+++|||.+.|++++++.++
T Consensus 78 ~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~ 154 (475)
T PLN02167 78 MELFVKAS---EAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLG 154 (475)
T ss_pred ccccccch---HHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHH
Confidence 11001000 01222222233 34444443221 12 4699999999999999999999999999999998887
Q ss_pred HHHHhhcc-cccc-C--CCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhhhcCceEEecCccccchhHH
Q 039413 154 CLHLLGVS-KVHE-N--VTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAADKKTYGTIINTFEELESPCI 229 (363)
Q Consensus 154 ~~~~~~~~-~~~~-~--~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~ 229 (363)
.+++++.. .... . ....+.++.+||++.. ++..+++.++........+.+......+++++++|||++||++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~--l~~~dlp~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~ 232 (475)
T PLN02167 155 MMKYLPERHRKTASEFDLSSGEEELPIPGFVNS--VPTKVLPPGLFMKESYEAWVEIAERFPEAKGILVNSFTELEPNAF 232 (475)
T ss_pred HHHHHHHhccccccccccCCCCCeeECCCCCCC--CChhhCchhhhCcchHHHHHHHHHhhcccCEeeeccHHHHHHHHH
Confidence 77655421 1111 0 0011123458888421 677788764433221222223334467899999999999999999
Q ss_pred HHHHhhc--CCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhh
Q 039413 230 EDYKKAK--QEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEA 307 (363)
Q Consensus 230 ~~~~~~~--~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~ 307 (363)
++++... .+++++|||+++....... . .....+.+|++|||+++++|||||||||+..++.+|++|++.||++
T Consensus 233 ~~l~~~~~~~p~v~~vGpl~~~~~~~~~----~-~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~ 307 (475)
T PLN02167 233 DYFSRLPENYPPVYPVGPILSLKDRTSP----N-LDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALEL 307 (475)
T ss_pred HHHHhhcccCCeeEEeccccccccccCC----C-CCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHh
Confidence 9997641 1689999999864221000 0 0011236799999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeCCcch-hhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 308 SNKPFVWVIRGESKL-EELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 308 ~~~~flW~~~~~~~~-~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
++++|||+++.+... ...... +|+||.||+++||+++ +|+||.+||+||+||+|
T Consensus 308 ~~~~flw~~~~~~~~~~~~~~~-lp~~~~er~~~rg~v~-~w~PQ~~iL~h~~vg~f 362 (475)
T PLN02167 308 VGCRFLWSIRTNPAEYASPYEP-LPEGFMDRVMGRGLVC-GWAPQVEILAHKAIGGF 362 (475)
T ss_pred CCCcEEEEEecCcccccchhhh-CChHHHHHhccCeeee-ccCCHHHHhcCcccCeE
Confidence 999999999864211 011123 8999999999999888 89999999999999998
No 19
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=8.2e-55 Score=403.93 Aligned_cols=336 Identities=24% Similarity=0.395 Sum_probs=237.8
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCC--CEEEEEeCCCChhhh---HHHhhhhhc-cCCceeEEEecCCCccCCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRG--AIVTIVTTPVNAARF---KTVHARAID-SGLQIRLIEIQFPWQQAGLPE 80 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rG--h~VT~~t~~~~~~~~---~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 80 (363)
|.|||++|+|++||++||++||++|+.|| ..|||++|+.+..++ ......... ..++|+++.+|++. ++
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~-----~~ 76 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGD-----QP 76 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCC-----CC
Confidence 56999999999999999999999999998 889999998765432 111111110 12258998887431 11
Q ss_pred CCCCCCCCCChhHHHHHHH-HHhchHHHHHHHHhC---C-CCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHH
Q 039413 81 GCENCDLLPTTDFARFLNS-LHMLQLPFENLFERQ---T-LKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCL 155 (363)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~---~-~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~ 155 (363)
. . . . ..+..+... ...+.+.+++++.+. . .+++|||+|.|++|+.++|+++|||.+.|++++++.++.+
T Consensus 77 ~-~--~-~--~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~ 150 (481)
T PLN02554 77 T-T--E-D--PTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQ 150 (481)
T ss_pred c-c--c-c--hHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHH
Confidence 1 0 0 0 111112222 223455666665431 1 2358999999999999999999999999999999998887
Q ss_pred HHhhccccc---c--CCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhhhcCceEEecCccccchhHHH
Q 039413 156 HLLGVSKVH---E--NVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAADKKTYGTIINTFEELESPCIE 230 (363)
Q Consensus 156 ~~~~~~~~~---~--~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~ 230 (363)
++++..... . .......++.+||++. .++..++|.++........+.+....+.+++++++|||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~--pl~~~dlp~~~~~~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~ 228 (481)
T PLN02554 151 LHVQMLYDEKKYDVSELEDSEVELDVPSLTR--PYPVKCLPSVLLSKEWLPLFLAQARRFREMKGILVNTVAELEPQALK 228 (481)
T ss_pred HhhhhhccccccCccccCCCCceeECCCCCC--CCCHHHCCCcccCHHHHHHHHHHHHhcccCCEEEEechHHHhHHHHH
Confidence 776432111 0 1111112345888742 16778888755433322333334445678999999999999999999
Q ss_pred HHHhh--cCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhC
Q 039413 231 DYKKA--KQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEAS 308 (363)
Q Consensus 231 ~~~~~--~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~ 308 (363)
++++. ..+++++|||++........ ....++.+|.+|||+++++|||||||||+..++.+|+++++.||+++
T Consensus 229 ~l~~~~~~~~~v~~vGpl~~~~~~~~~------~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~ 302 (481)
T PLN02554 229 FFSGSSGDLPPVYPVGPVLHLENSGDD------SKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERS 302 (481)
T ss_pred HHHhcccCCCCEEEeCCCccccccccc------cccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHc
Confidence 98863 23789999999432111100 00124578999999999899999999999999999999999999999
Q ss_pred CCCeEEEEeCCcc---------hhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 309 NKPFVWVIRGESK---------LEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 309 ~~~flW~~~~~~~---------~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+++|||+++.+.. ..+..+. +|+||.+|+++||+++ +|+||.+||+||+||+|
T Consensus 303 ~~~flW~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~r~~~~g~v~-~W~PQ~~iL~H~~v~~F 364 (481)
T PLN02554 303 GHRFLWSLRRASPNIMKEPPGEFTNLEEI-LPEGFLDRTKDIGKVI-GWAPQVAVLAKPAIGGF 364 (481)
T ss_pred CCCeEEEEcCCcccccccccccccchhhh-CChHHHHHhccCceEE-eeCCHHHHhCCcccCcc
Confidence 9999999986311 0011233 7999999999999988 89999999999999998
No 20
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=2.7e-54 Score=396.52 Aligned_cols=333 Identities=26% Similarity=0.403 Sum_probs=238.3
Q ss_pred CCCC-CCCceEEEEcCCCCCCHHHHHHHHHH--HHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCC
Q 039413 1 MASE-ASQSHFLLLPFLAPGHMIPMFDTARL--LAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAG 77 (363)
Q Consensus 1 m~~~-~~~~~lv~~p~p~~gH~~p~l~La~~--La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (363)
|++. ..+.||+++|+|++||++||++||++ |++||++|||++|+.+..+++.. . .....+++..++ ++
T Consensus 1 ~~~~~~~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~-~---~~~~~~~~~~~~-----~g 71 (456)
T PLN02210 1 MGSSEGQETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTV-E---KPRRPVDLVFFS-----DG 71 (456)
T ss_pred CCCcCCCCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccc-c---CCCCceEEEECC-----CC
Confidence 5433 45679999999999999999999999 56999999999998776544321 1 011235554443 45
Q ss_pred CCCCCCCCCCCCChhHHHHHHHH-HhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHH
Q 039413 78 LPEGCENCDLLPTTDFARFLNSL-HMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLH 156 (363)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~ 156 (363)
+|++.+. ....+...+ ..+.+.+++++++ .++||||+|.++.|+.++|+++|||.+.||+.++..+..++
T Consensus 72 lp~~~~~-------~~~~~~~~~~~~~~~~l~~~l~~--~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~ 142 (456)
T PLN02210 72 LPKDDPR-------APETLLKSLNKVGAKNLSKIIEE--KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYY 142 (456)
T ss_pred CCCCccc-------CHHHHHHHHHHhhhHHHHHHHhc--CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHH
Confidence 6654311 112233333 3556778888876 47999999999999999999999999999999998887766
Q ss_pred Hhhcc-ccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCc-c--HHHHHHHHHHhhhcCceEEecCccccchhHHHHH
Q 039413 157 LLGVS-KVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDD-D--FKELQEQIFAADKKTYGTIINTFEELESPCIEDY 232 (363)
Q Consensus 157 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~-~--~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~ 232 (363)
++... .......+......+||++. ++..+++.++... + +.....++.....+++++++|||++||+++++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~Pgl~~---~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l 219 (456)
T PLN02210 143 RYYMKTNSFPDLEDLNQTVELPALPL---LEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESM 219 (456)
T ss_pred hhhhccCCCCcccccCCeeeCCCCCC---CChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHH
Confidence 54321 11111111112345788874 6778888755432 2 2233334444456789999999999999999998
Q ss_pred HhhcCCceEEeCcCCCCC---CCCchh-hhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhC
Q 039413 233 KKAKQEKVWCIGPVSLCN---KEPIDK-AERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEAS 308 (363)
Q Consensus 233 ~~~~~~~v~~VGpl~~~~---~~~~~~-~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~ 308 (363)
++ . +++++|||++... ...... .......+..+.+|.+|||+++++|||||||||...++.+|+++++.||+++
T Consensus 220 ~~-~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~ 297 (456)
T PLN02210 220 AD-L-KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNR 297 (456)
T ss_pred hh-c-CCEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhC
Confidence 86 3 5799999997521 111000 0000011234578999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeCCcchhhhhhccchhhHHHHh-CCCceEecCchhHHhhhcCCCCccC
Q 039413 309 NKPFVWVIRGESKLEELEKWLVEENFKERI-KGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 309 ~~~flW~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+++|||+++.+... + .++.|.+++ +++|+|+ +|+||.+||+|++||+|
T Consensus 298 ~~~flw~~~~~~~~----~--~~~~~~~~~~~~~g~v~-~w~PQ~~iL~h~~vg~F 346 (456)
T PLN02210 298 GVPFLWVIRPKEKA----Q--NVQVLQEMVKEGQGVVL-EWSPQEKILSHMAISCF 346 (456)
T ss_pred CCCEEEEEeCCccc----c--chhhHHhhccCCCeEEE-ecCCHHHHhcCcCcCeE
Confidence 99999999864221 1 456777887 4899877 89999999999999998
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=8.2e-51 Score=375.91 Aligned_cols=328 Identities=27% Similarity=0.425 Sum_probs=235.9
Q ss_pred CCCCceEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCC
Q 039413 4 EASQSHFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEG 81 (363)
Q Consensus 4 ~~~~~~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (363)
++.+.||+++|+|++||++||++|+++|++| ||+|||++++.+.+++.... ...+++|+.+|. ++|++
T Consensus 7 ~~~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~-----~~~gi~fv~lp~-----~~p~~ 76 (459)
T PLN02448 7 PTTSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDP-----KPDNIRFATIPN-----VIPSE 76 (459)
T ss_pred CCCCcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccC-----CCCCEEEEECCC-----CCCCc
Confidence 4678899999999999999999999999999 99999999988776554421 113588888762 34433
Q ss_pred CCCCCCCCChhHHHHHHH-HHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhc
Q 039413 82 CENCDLLPTTDFARFLNS-LHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGV 160 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~ 160 (363)
.+.. .+...+... ...+.+.+++++++...++||||+|.++.|+..+|+++|||.|.|+++++..++.+.++..
T Consensus 77 ~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~ 151 (459)
T PLN02448 77 LVRA-----ADFPGFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDL 151 (459)
T ss_pred cccc-----cCHHHHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhh
Confidence 2111 122222223 3356778888887644468999999999999999999999999999999977776665532
Q ss_pred ccccc--CCCC---CCCC-cCCCCCCCCcccccCCCCCCCCCcc--HHHHHHHHHHhhhcCceEEecCccccchhHHHHH
Q 039413 161 SKVHE--NVTS---DSDY-FNIPGLPDHIQFTKVQLPISEQDDD--FKELQEQIFAADKKTYGTIINTFEELESPCIEDY 232 (363)
Q Consensus 161 ~~~~~--~~~~---~~~~-~~~p~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~ 232 (363)
..... +... .+.. ..+||++. ++..+++.++.... .............+++++++|||+|||+.+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~iPg~~~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l 228 (459)
T PLN02448 152 LPQNGHFPVELSESGEERVDYIPGLSS---TRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDAL 228 (459)
T ss_pred hhhccCCCCccccccCCccccCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHH
Confidence 11100 1110 0111 14777764 67778887554322 1222222333456788999999999999999999
Q ss_pred HhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCe
Q 039413 233 KKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPF 312 (363)
Q Consensus 233 ~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~f 312 (363)
++.+++++++|||+........... .......+.+|.+|||+++++|||||||||+..++.+++++++.||++++++|
T Consensus 229 ~~~~~~~~~~iGP~~~~~~~~~~~~--~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~ 306 (459)
T PLN02448 229 KSKFPFPVYPIGPSIPYMELKDNSS--SSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRF 306 (459)
T ss_pred HhhcCCceEEecCcccccccCCCcc--ccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCE
Confidence 8766668999999965321100000 00000123589999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 313 VWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 313 lW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
||+++.+. .+|.++.+++|+++ +|+||.+||+||+||+|
T Consensus 307 lw~~~~~~-----------~~~~~~~~~~~~v~-~w~pQ~~iL~h~~v~~f 345 (459)
T PLN02448 307 LWVARGEA-----------SRLKEICGDMGLVV-PWCDQLKVLCHSSVGGF 345 (459)
T ss_pred EEEEcCch-----------hhHhHhccCCEEEe-ccCCHHHHhccCccceE
Confidence 99997531 23555566788877 89999999999999987
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=4e-35 Score=273.25 Aligned_cols=306 Identities=16% Similarity=0.172 Sum_probs=190.1
Q ss_pred CceEE-EEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCcc--CCCCC-C-
Q 039413 7 QSHFL-LLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQ--AGLPE-G- 81 (363)
Q Consensus 7 ~~~lv-~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~-~- 81 (363)
..+|+ ++|.+++||++.+.+++++|++|||+||++++...... ... ...+++.+.++..... +.+.. .
T Consensus 20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~-~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~ 92 (507)
T PHA03392 20 AARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYY-ASH------LCGNITEIDASLSVEYFKKLVKSSAV 92 (507)
T ss_pred cccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEeccccccc-ccC------CCCCEEEEEcCCChHHHHHHHhhhhH
Confidence 34565 45999999999999999999999999999987542110 000 0123444443321000 00000 0
Q ss_pred CCCCCCC-CChhH-----HHHHHHHH--hchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHc-CCCcEEEecccHHHH
Q 039413 82 CENCDLL-PTTDF-----ARFLNSLH--MLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKF-NVPRIIFHEFSCFCL 152 (363)
Q Consensus 82 ~~~~~~~-~~~~~-----~~~~~~~~--~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~-~iP~v~~~~~~~~~~ 152 (363)
....... ....+ ..+...++ ...+.+++++++.+.+||+||+|.+..|++.+|+++ ++|.|.+++++....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~ 172 (507)
T PHA03392 93 FRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAE 172 (507)
T ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchh
Confidence 0000000 00000 11111222 125677788862225799999999999999999999 999988888655432
Q ss_pred HHHHHhhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCc-cH-----------------HHHHHHH--------
Q 039413 153 FCLHLLGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDD-DF-----------------KELQEQI-------- 206 (363)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~-~~-----------------~~~~~~~-------- 206 (363)
.... .. ..+..+.++|.... ...+-++++++- ++ +++.++.
T Consensus 173 ~~~~-~g--------g~p~~~syvP~~~~----~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~ 239 (507)
T PHA03392 173 NFET-MG--------AVSRHPVYYPNLWR----SKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTI 239 (507)
T ss_pred HHHh-hc--------cCCCCCeeeCCccc----CCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCH
Confidence 2111 00 01222455665442 333444444431 10 0111111
Q ss_pred HHhhhcCceEEecCccccchhHHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEe
Q 039413 207 FAADKKTYGTIINTFEELESPCIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVC 286 (363)
Q Consensus 207 ~~~~~~~~~~l~nt~~~le~~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvs 286 (363)
....++++.+++|+...+|.+ | .++|+++.|||++..+... +++++++.+||++++ +++||||
T Consensus 240 ~~l~~~~~l~lvns~~~~d~~-----r-p~~p~v~~vGgi~~~~~~~----------~~l~~~l~~fl~~~~-~g~V~vS 302 (507)
T PHA03392 240 RELRNRVQLLFVNVHPVFDNN-----R-PVPPSVQYLGGLHLHKKPP----------QPLDDYLEEFLNNST-NGVVYVS 302 (507)
T ss_pred HHHHhCCcEEEEecCccccCC-----C-CCCCCeeeecccccCCCCC----------CCCCHHHHHHHhcCC-CcEEEEE
Confidence 122345678999999999864 3 4679999999998743111 126789999999974 5799999
Q ss_pred cCCCc---CCChhHHHHHHHHHhhCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 287 LGSIC---NLPSSQLIELGLGLEASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 287 fGS~~---~l~~~~~~~~~~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
|||+. .++.++++.++++|++++++|||+++++... .+ +|+| .+ +.+|+||.+||+||+|++|
T Consensus 303 ~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~---~~--~p~N--------v~-i~~w~Pq~~lL~hp~v~~f 368 (507)
T PHA03392 303 FGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEA---IN--LPAN--------VL-TQKWFPQRAVLKHKNVKAF 368 (507)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCc---cc--CCCc--------eE-EecCCCHHHHhcCCCCCEE
Confidence 99986 4789999999999999999999999864211 01 4433 33 4489999999999999987
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=4.3e-36 Score=284.25 Aligned_cols=298 Identities=22% Similarity=0.246 Sum_probs=153.5
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCC--
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCD-- 86 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-- 86 (363)
+|+++|. ++||+++|..++++|++|||+||++++.... .+... ....+++..++.+..............
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPSS-SLNPS------KPSNIRFETYPDPYPEEEFEEIFPEFISK 73 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TTSEEEHHHHHH-T------------S-CCEEEE-----TT------TTHHHH
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeeccc-ccccc------cccceeeEEEcCCcchHHHhhhhHHHHHH
Confidence 6888985 8899999999999999999999999874211 11100 112466666653221111111100000
Q ss_pred ---CCCC-hhHHHHHHHHH--------hc-----hHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccH
Q 039413 87 ---LLPT-TDFARFLNSLH--------ML-----QLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSC 149 (363)
Q Consensus 87 ---~~~~-~~~~~~~~~~~--------~~-----~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~ 149 (363)
.... ........... .| .+.+.+.+++ .+||++|+|.+.+|+..+|+.+|+|.+.+.+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~--~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~ 151 (500)
T PF00201_consen 74 FFSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKS--EKFDLVISDAFDPCGLALAHYLGIPVIIISSSTP 151 (500)
T ss_dssp HHHHHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHH--HHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCS
T ss_pred HhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh--hccccceEeeccchhHHHHHHhcCCeEEEecccc
Confidence 0000 00000111100 01 1112222222 4699999999999999999999999876543321
Q ss_pred HHHHHHHHhhccccccCC-CCCCCCcCCCCCCCCcccccCCCCCCCCCc-c-HHH----HHHH-H---------------
Q 039413 150 FCLFCLHLLGVSKVHENV-TSDSDYFNIPGLPDHIQFTKVQLPISEQDD-D-FKE----LQEQ-I--------------- 206 (363)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~-~-~~~----~~~~-~--------------- 206 (363)
.... .... ..+..+.++|... ....+-+++.++- + +.. +... +
T Consensus 152 ~~~~----------~~~~~g~p~~psyvP~~~----s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (500)
T PF00201_consen 152 MYDL----------SSFSGGVPSPPSYVPSMF----SDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFP 217 (500)
T ss_dssp CSCC----------TCCTSCCCTSTTSTTCBC----CCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-G
T ss_pred cchh----------hhhccCCCCChHHhcccc----ccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccc
Confidence 1100 0000 1111233344322 1223344454431 1 111 1100 0
Q ss_pred ---HHhhhcCceEEecCccccchhHHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEE
Q 039413 207 ---FAADKKTYGTIINTFEELESPCIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVV 283 (363)
Q Consensus 207 ---~~~~~~~~~~l~nt~~~le~~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVI 283 (363)
.+.+.+++.+++|+...++. +|+.. |++++|||++..++++ ++.++.+|+|+.+++|||
T Consensus 218 ~~~~~~~~~~~l~l~ns~~~ld~-----prp~~-p~v~~vGgl~~~~~~~------------l~~~~~~~~~~~~~~~vv 279 (500)
T PF00201_consen 218 FSFRELLSNASLVLINSHPSLDF-----PRPLL-PNVVEVGGLHIKPAKP------------LPEELWNFLDSSGKKGVV 279 (500)
T ss_dssp GGCHHHHHHHHHCCSSTEEE---------HHHH-CTSTTGCGC-S----T------------CHHHHHHHTSTTTTTEEE
T ss_pred cccHHHHHHHHHHhhhccccCcC-----Ccchh-hcccccCccccccccc------------cccccchhhhccCCCCEE
Confidence 01122344567788877764 35544 7999999998864432 668899999996678899
Q ss_pred EEecCCCc-CCChhHHHHHHHHHhhCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCcc
Q 039413 284 YVCLGSIC-NLPSSQLIELGLGLEASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGG 362 (363)
Q Consensus 284 yvsfGS~~-~l~~~~~~~~~~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~ 362 (363)
||||||++ .++.++++++++||++++++||||+++... .. +|+ +.+++ +|+||++||+||+|++
T Consensus 280 ~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~----~~--l~~--------n~~~~-~W~PQ~~lL~hp~v~~ 344 (500)
T PF00201_consen 280 YVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEPP----EN--LPK--------NVLIV-KWLPQNDLLAHPRVKL 344 (500)
T ss_dssp EEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSHG----CH--HHT--------TEEEE-SS--HHHHHTSTTEEE
T ss_pred EEecCcccchhHHHHHHHHHHHHhhCCCccccccccccc----cc--ccc--------eEEEe-ccccchhhhhccccee
Confidence 99999987 477777999999999999999999987411 11 333 33555 8999999999999998
Q ss_pred C
Q 039413 363 C 363 (363)
Q Consensus 363 F 363 (363)
|
T Consensus 345 f 345 (500)
T PF00201_consen 345 F 345 (500)
T ss_dssp E
T ss_pred e
Confidence 7
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=2.3e-33 Score=265.67 Aligned_cols=315 Identities=29% Similarity=0.424 Sum_probs=176.9
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCcee---EEEecCCCccCCCCCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIR---LIEIQFPWQQAGLPEGCE 83 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~ 83 (363)
+.|++++++|++||++|+..++++|++|||+||++++.......... . ....+. ....++....++++...+
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKS-S----KSKSIKKINPPPFEFLTIPDGLPEGWE 79 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCc-c----cceeeeeeecChHHhhhhhhhhccchH
Confidence 57999999999999999999999999999999999987654322110 0 000011 111111000012222111
Q ss_pred CCCCCCChh-HHHHHHHHH-hchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcC-CCcEEEecccHHHHHHHHHhhc
Q 039413 84 NCDLLPTTD-FARFLNSLH-MLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFN-VPRIIFHEFSCFCLFCLHLLGV 160 (363)
Q Consensus 84 ~~~~~~~~~-~~~~~~~~~-~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~-iP~v~~~~~~~~~~~~~~~~~~ 160 (363)
... ..... ...+...+. .+......+......+|||+|+|.+..|...+|...+ ++...+++.++.......+.+.
T Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~ 158 (496)
T KOG1192|consen 80 DDD-LDISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPL 158 (496)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcc
Confidence 100 00000 011111111 1222222222221234999999999888888888775 8888888877665443221110
Q ss_pred cccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCcc------H-------------HHHHHHHHHhh----hcCceEE
Q 039413 161 SKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDD------F-------------KELQEQIFAAD----KKTYGTI 217 (363)
Q Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~------~-------------~~~~~~~~~~~----~~~~~~l 217 (363)
.++|..... ...+.+.+..+.. . ........... ..++.++
T Consensus 159 -------------~~~p~~~~~---~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 222 (496)
T KOG1192|consen 159 -------------SYVPSPFSL---SSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGII 222 (496)
T ss_pred -------------cccCcccCc---cccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhh
Confidence 122221110 0001111111100 0 00000000000 1122344
Q ss_pred ecC-ccccchhHHHHHHh-hcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCC--cEEEEecCCCc--
Q 039413 218 INT-FEELESPCIEDYKK-AKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPT--SVVYVCLGSIC-- 291 (363)
Q Consensus 218 ~nt-~~~le~~~~~~~~~-~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~--sVIyvsfGS~~-- 291 (363)
.|+ +..++.+....++. ...+++++|||++...... ....|++|+|.++.+ |||||||||++
T Consensus 223 ~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~~------------~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~ 290 (496)
T KOG1192|consen 223 VNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSKQ------------KSPLPLEWLDILDESRHSVVYISFGSMVNS 290 (496)
T ss_pred hcCeEEEEccCcccCCCCCCCCCCceEECcEEecCccc------------cccccHHHHHHHhhccCCeEEEECCccccc
Confidence 454 66666554433322 2358999999998762211 112578888888776 99999999998
Q ss_pred -CCChhHHHHHHHHHhhC-CCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEe-cCchhHHhh-hcCCCCccC
Q 039413 292 -NLPSSQLIELGLGLEAS-NKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLI-RGWAPQVLI-LSHPAVGGC 363 (363)
Q Consensus 292 -~l~~~~~~~~~~~l~~~-~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv-~~W~PQ~~i-L~Hp~v~~F 363 (363)
.++++++++++.||+++ +++|||+++.+.... +++++.++ ++|.|+ .+|+||.++ |+||+||||
T Consensus 291 ~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~------~~~~~~~~--~~~nV~~~~W~PQ~~lll~H~~v~~F 358 (496)
T KOG1192|consen 291 ADLPEEQKKELAKALESLQGVTFLWKYRPDDSIY------FPEGLPNR--GRGNVVLSKWAPQNDLLLDHPAVGGF 358 (496)
T ss_pred ccCCHHHHHHHHHHHHhCCCceEEEEecCCcchh------hhhcCCCC--CcCceEEecCCCcHHHhcCCCcCcEE
Confidence 89999999999999999 778999999763211 34444433 344443 379999999 599999998
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.89 E-value=3e-22 Score=183.97 Aligned_cols=281 Identities=16% Similarity=0.152 Sum_probs=153.6
Q ss_pred EcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCCChh
Q 039413 13 LPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLPTTD 92 (363)
Q Consensus 13 ~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (363)
+.+|++||++|++.||++|.+|||+||+++++.+.+.+... ++.+..++..... +...+.........
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~---------G~~~~~~~~~~~~---~~~~~~~~~~~~~~ 68 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAA---------GAEFVLYGSALPP---PDNPPENTEEEPID 68 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHc---------CCEEEecCCcCcc---ccccccccCcchHH
Confidence 35789999999999999999999999999998776655542 4677766532110 00100000000011
Q ss_pred H-HHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccccccCCCCCC
Q 039413 93 F-ARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSKVHENVTSDS 171 (363)
Q Consensus 93 ~-~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (363)
+ ..+..........+.++++. .++||||+|.++.|+..+|+++|||+|.+++..... ..++.
T Consensus 69 ~~~~~~~~~~~~~~~l~~~~~~--~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~~----------- 131 (392)
T TIGR01426 69 IIEKLLDEAEDVLPQLEEAYKG--DRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEFEE----------- 131 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----ccccc-----------
Confidence 1 11111111222333444443 579999999988899999999999999886542110 00000
Q ss_pred CCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhh------------hcCceEEecCccccchhHHHHHHhhcCCc
Q 039413 172 DYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAAD------------KKTYGTIINTFEELESPCIEDYKKAKQEK 239 (363)
Q Consensus 172 ~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~nt~~~le~~~~~~~~~~~~~~ 239 (363)
..+...... ......... ....+.....++.... ...+..+..+-..++ ..+..++++
T Consensus 132 ---~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~-----~~~~~~~~~ 201 (392)
T TIGR01426 132 ---MVSPAGEGS-AEEGAIAER-GLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQ-----PAGETFDDS 201 (392)
T ss_pred ---cccccchhh-hhhhccccc-hhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhC-----CCccccCCC
Confidence 000000000 000000000 0000101111111000 011112222222222 223346678
Q ss_pred eEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeCC
Q 039413 240 VWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGE 319 (363)
Q Consensus 240 v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~~ 319 (363)
+..|||+...+. +...|++..+.+.+|||||||+.....+.+++++++|++.+++++|.....
T Consensus 202 ~~~~Gp~~~~~~-----------------~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~ 264 (392)
T TIGR01426 202 FTFVGPCIGDRK-----------------EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRG 264 (392)
T ss_pred eEEECCCCCCcc-----------------ccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 999999754211 123477766667899999999876666789999999999999999987543
Q ss_pred cchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCC
Q 039413 320 SKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAV 360 (363)
Q Consensus 320 ~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v 360 (363)
.......+ + .++.. +.+|+||.++|+|.++
T Consensus 265 ~~~~~~~~--~--------~~~v~-~~~~~p~~~ll~~~~~ 294 (392)
T TIGR01426 265 VDPADLGE--L--------PPNVE-VRQWVPQLEILKKADA 294 (392)
T ss_pred CChhHhcc--C--------CCCeE-EeCCCCHHHHHhhCCE
Confidence 21111111 2 23334 4489999999998754
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.86 E-value=3.9e-21 Score=177.39 Aligned_cols=285 Identities=13% Similarity=0.071 Sum_probs=149.9
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCC-CCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEG-CENCD 86 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~ 86 (363)
+||+++++|+.||++|++.|+++|++|||+|||++++.....+.. .+++|..++........... .....
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~---------~G~~~~~~~~~~~~~~~~~~~~~~~~ 71 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEA---------AGLEFVPVGGDPDELLASPERNAGLL 71 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHH---------cCCceeeCCCCHHHHHhhhhhccccc
Confidence 489999999999999999999999999999999999865554443 24677665421100000000 00000
Q ss_pred CCCChhHHHHHHHH-HhchHHHHHHHHhC-CCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccccc
Q 039413 87 LLPTTDFARFLNSL-HMLQLPFENLFERQ-TLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSKVH 164 (363)
Q Consensus 87 ~~~~~~~~~~~~~~-~~~~~~~~~ll~~~-~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
.............. ......++++++.. ..++|+||+|.+..++..+|+++|+|+|.+++.+.....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~----------- 140 (401)
T cd03784 72 LLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTS----------- 140 (401)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccc-----------
Confidence 00000111111111 12223333333321 257999999998888999999999999999875422100
Q ss_pred cCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhhhcCce-------------E---EecCccccchhH
Q 039413 165 ENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAADKKTYG-------------T---IINTFEELESPC 228 (363)
Q Consensus 165 ~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~---l~nt~~~le~~~ 228 (363)
..++.................+...........++..+ . +.+++...
T Consensus 141 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~---- 203 (401)
T cd03784 141 -------------AFPPPLGRANLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPP---- 203 (401)
T ss_pred -------------cCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCC----
Confidence 00000000000000000000000000000000011000 0 11111111
Q ss_pred HHHHHhhcCCceEEeC-cCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcC-CChhHHHHHHHHHh
Q 039413 229 IEDYKKAKQEKVWCIG-PVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICN-LPSSQLIELGLGLE 306 (363)
Q Consensus 229 ~~~~~~~~~~~v~~VG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~-l~~~~~~~~~~~l~ 306 (363)
....+++...+| ++...+. . ...+.++..|+++. +.+|||+|||+.. ...+..+.++++++
T Consensus 204 ----~~~~~~~~~~~g~~~~~~~~-~----------~~~~~~~~~~~~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~a~~ 266 (401)
T cd03784 204 ----PPDWPRFDLVTGYGFRDVPY-N----------GPPPPELWLFLAAG--RPPVYVGFGSMVVRDPEALARLDVEAVA 266 (401)
T ss_pred ----CCCccccCcEeCCCCCCCCC-C----------CCCCHHHHHHHhCC--CCcEEEeCCCCcccCHHHHHHHHHHHHH
Confidence 112223444554 3322111 0 11356778898773 4599999999876 44567899999999
Q ss_pred hCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCC
Q 039413 307 ASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPA 359 (363)
Q Consensus 307 ~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~ 359 (363)
..+.+++|..+...... .. +| ++.. +.+|+||.++|.|-+
T Consensus 267 ~~~~~~i~~~g~~~~~~--~~--~~--------~~v~-~~~~~p~~~ll~~~d 306 (401)
T cd03784 267 TLGQRAILSLGWGGLGA--ED--LP--------DNVR-VVDFVPHDWLLPRCA 306 (401)
T ss_pred HcCCeEEEEccCccccc--cC--CC--------CceE-EeCCCCHHHHhhhhh
Confidence 99999999887542110 01 22 3344 448999999999854
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.60 E-value=1.2e-14 Score=132.65 Aligned_cols=123 Identities=17% Similarity=0.245 Sum_probs=73.8
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCD 86 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (363)
+++++++..|+.||++|.+.|+++|.+|||+|+++++....+.+... ++.|..++.. . .+...+...
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~a---------g~~f~~~~~~-~---~~~~~~~~~ 67 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAA---------GLAFVAYPIR-D---SELATEDGK 67 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHh---------Ccceeecccc-C---Chhhhhhhh
Confidence 35899999999999999999999999999999999998777666553 3556655432 0 000000000
Q ss_pred CCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEe
Q 039413 87 LLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFH 145 (363)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~ 145 (363)
......+.............+.+++.+ ..+|+|+.|.-.... .++..+++|+++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~e--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 123 (406)
T COG1819 68 FAGVKSFRRLLQQFKKLIRELLELLRE--LEPDLVVDDARLSLG-LAARLLGIPVVGIN 123 (406)
T ss_pred hhccchhHHHhhhhhhhhHHHHHHHHh--cchhhhhcchhhhhh-hhhhhcccchhhhh
Confidence 000000110111111222233334444 478888888655444 77778888877653
No 28
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.04 E-value=1.7e-10 Score=89.88 Aligned_cols=122 Identities=20% Similarity=0.258 Sum_probs=74.2
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCC
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLP 89 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (363)
|++...++.||++|++.|+++|.+|||+|++.+.+...+.+.+. ++.++.++.. ..++...+ .
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~---------Gl~~~~~~~~---~~~~~~~~-----~ 63 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAA---------GLEFVPIPGD---SRLPRSLE-----P 63 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHT---------T-EEEESSSC---GGGGHHHH-----H
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceeccccc---------CceEEEecCC---cCcCcccc-----h
Confidence 67889999999999999999999999999999998776665432 5888877531 00000000 0
Q ss_pred ChhHHHHHH---HHHhchHHHHHHHHhC----C--CCCcEEEecCCCccHHHHHHHcCCCcEEEeccc
Q 039413 90 TTDFARFLN---SLHMLQLPFENLFERQ----T--LKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 90 ~~~~~~~~~---~~~~~~~~~~~ll~~~----~--~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~ 148 (363)
...+..... ........+++...+. . ...|+++.+........+|+++++|.+.....+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 64 LANLRRLARLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSG
T ss_pred hhhhhhHHHHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCC
Confidence 000000111 1111222232222221 1 247788888877788899999999999876654
No 29
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.18 E-value=1.8e-05 Score=70.75 Aligned_cols=118 Identities=21% Similarity=0.219 Sum_probs=65.6
Q ss_pred eEEEEcCC-CCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCC
Q 039413 9 HFLLLPFL-APGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDL 87 (363)
Q Consensus 9 ~lv~~p~p-~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
||++.... |.||+.-.+.|+++| |||+|+|++.....+.+.. .+.+..++.- .........+.
T Consensus 2 kIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~----------~~~~~~~~~~----~~~~~~~~~~~ 65 (318)
T PF13528_consen 2 KILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKP----------RFPVREIPGL----GPIQENGRLDR 65 (318)
T ss_pred EEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcc----------ccCEEEccCc----eEeccCCccch
Confidence 55555544 899999999999999 6999999998644322211 1233333210 00000001100
Q ss_pred CCChhHHHHH---HHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecc
Q 039413 88 LPTTDFARFL---NSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 88 ~~~~~~~~~~---~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~ 147 (363)
. ....... .........+.+++++ .++|+||+|. .+.+...|+..|+|++++...
T Consensus 66 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~--~~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~ 123 (318)
T PF13528_consen 66 W--KTVRNNIRWLARLARRIRREIRWLRE--FRPDLVISDF-YPLAALAARRAGIPVIVISNQ 123 (318)
T ss_pred H--HHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEcC-hHHHHHHHHhcCCCEEEEEeh
Confidence 0 0011111 1111122233344554 5799999994 444567888999999988654
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.81 E-value=0.00019 Score=64.28 Aligned_cols=113 Identities=15% Similarity=0.025 Sum_probs=62.6
Q ss_pred EEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCcee-EEEecCCCccCCCCCCCCCCCCCCC
Q 039413 12 LLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIR-LIEIQFPWQQAGLPEGCENCDLLPT 90 (363)
Q Consensus 12 ~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (363)
.+...+.||+.+.+.++++|.+ ||+|+++++......++.. ++. +...+.... ....+ ..
T Consensus 5 ~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~---------~~~~~~~~p~~~~--~~~~~-----~~-- 65 (321)
T TIGR00661 5 SVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKY---------GFKVFETFPGIKL--KGEDG-----KV-- 65 (321)
T ss_pred EEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhh---------cCcceeccCCceE--eecCC-----cC--
Confidence 3455677999999999999999 9999999875522212111 121 222110000 00011 00
Q ss_pred hhHHHHHH--HH-HhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEec
Q 039413 91 TDFARFLN--SL-HMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHE 146 (363)
Q Consensus 91 ~~~~~~~~--~~-~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~ 146 (363)
.....+.. .. ...-....+++++ .+||+||+| +...+..+|+.+|+|.+.+.-
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~~l~~--~~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~ 121 (321)
T TIGR00661 66 NIVKTLRNKEYSPKKAIRREINIIRE--YNPDLIISD-FEYSTVVAAKLLKIPVICISN 121 (321)
T ss_pred cHHHHHHhhccccHHHHHHHHHHHHh--cCCCEEEEC-CchHHHHHHHhcCCCEEEEec
Confidence 01111110 00 0011122345555 579999999 555557789999999997754
No 31
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=97.44 E-value=0.0027 Score=57.52 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=67.9
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLL 88 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (363)
+|++..-..-||+.|.++++++|.++||+|+++++....+. ... ...++.+..++. .++.. .
T Consensus 3 ~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~--~l~-----~~~g~~~~~~~~----~~l~~-------~ 64 (352)
T PRK12446 3 KIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEK--TII-----EKENIPYYSISS----GKLRR-------Y 64 (352)
T ss_pred eEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCcccc--ccC-----cccCCcEEEEec----cCcCC-------C
Confidence 67888878889999999999999999999999987543221 110 011355555542 11110 0
Q ss_pred CChhHHHHHHHHHhc--hHHHHHHHHhCCCCCcEEEecCCCc--cHHHHHHHcCCCcEEEecc
Q 039413 89 PTTDFARFLNSLHML--QLPFENLFERQTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 89 ~~~~~~~~~~~~~~~--~~~~~~ll~~~~~~~d~vI~D~~~~--~~~~vA~~~~iP~v~~~~~ 147 (363)
..+..+....... .-...+++++ .+||+||..--+. .....|..+++|.+..-..
T Consensus 65 --~~~~~~~~~~~~~~~~~~~~~i~~~--~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n 123 (352)
T PRK12446 65 --FDLKNIKDPFLVMKGVMDAYVRIRK--LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESD 123 (352)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCC
Confidence 0111111111111 1122345555 6899999865333 2355667779998776443
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=96.63 E-value=0.045 Score=49.67 Aligned_cols=117 Identities=20% Similarity=0.178 Sum_probs=66.7
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDL 87 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
++|+++.-...||...+..|+++|.++||+|++++....... ... ...+++++.++.+ ++... ..
T Consensus 2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~-~~~------~~~g~~~~~~~~~----~~~~~----~~ 66 (357)
T PRK00726 2 KKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEA-RLV------PKAGIEFHFIPSG----GLRRK----GS 66 (357)
T ss_pred cEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhh-hcc------ccCCCcEEEEecc----CcCCC----Ch
Confidence 478888877779999999999999999999999987542110 000 0013555555421 11100 00
Q ss_pred CCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCC-ccH-HHHHHHcCCCcEEE
Q 039413 88 LPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCF-PWT-VDTAAKFNVPRIIF 144 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~-~~~-~~vA~~~~iP~v~~ 144 (363)
.......... ......+.+++++ .+||+|++.... .+. ..++...++|.|..
T Consensus 67 --~~~l~~~~~~-~~~~~~~~~~ik~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 120 (357)
T PRK00726 67 --LANLKAPFKL-LKGVLQARKILKR--FKPDVVVGFGGYVSGPGGLAARLLGIPLVIH 120 (357)
T ss_pred --HHHHHHHHHH-HHHHHHHHHHHHh--cCCCEEEECCCcchhHHHHHHHHcCCCEEEE
Confidence 0000111111 1122345556665 589999988643 333 33455668998765
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=96.58 E-value=0.05 Score=49.18 Aligned_cols=116 Identities=19% Similarity=0.183 Sum_probs=65.9
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLL 88 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (363)
+|++..--..||......|++.|.++||+|++++...... . ... ...++++..++.. +.... ..
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~-~-~~~-----~~~~~~~~~~~~~----~~~~~----~~- 64 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLE-A-RLV-----PKAGIPLHTIPVG----GLRRK----GS- 64 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcch-h-hcc-----cccCCceEEEEec----CcCCC----Ch-
Confidence 3566666677999999999999999999999998753211 1 110 0113566655531 11100 00
Q ss_pred CChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCC-c-cHHHHHHHcCCCcEEE
Q 039413 89 PTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCF-P-WTVDTAAKFNVPRIIF 144 (363)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~-~-~~~~vA~~~~iP~v~~ 144 (363)
...+...+.. ......+.+++++ .+||+|++.... . ++...|...++|.+..
T Consensus 65 -~~~~~~~~~~-~~~~~~~~~~i~~--~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~ 118 (350)
T cd03785 65 -LKKLKAPFKL-LKGVLQARKILKK--FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIH 118 (350)
T ss_pred -HHHHHHHHHH-HHHHHHHHHHHHh--cCCCEEEECCCCcchHHHHHHHHhCCCEEEE
Confidence 0011111111 1122345566666 589999987533 2 3345677789998764
No 34
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=96.52 E-value=0.058 Score=48.67 Aligned_cols=116 Identities=19% Similarity=0.158 Sum_probs=65.7
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLL 88 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (363)
+++++.-...||+.....|+++|.++||+|++++.+.... .... ...+++++.++.. ... ... .
T Consensus 2 ~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~--~~~~-----~~~g~~~~~i~~~----~~~----~~~-~ 65 (348)
T TIGR01133 2 KVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLE--KRLV-----PKAGIEFYFIPVG----GLR----RKG-S 65 (348)
T ss_pred eEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcch--hccc-----ccCCCceEEEecc----CcC----CCC-h
Confidence 6888887888999977899999999999999998643211 0110 0013556555421 000 000 0
Q ss_pred CChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCc-c-HHHHHHHcCCCcEEE
Q 039413 89 PTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFP-W-TVDTAAKFNVPRIIF 144 (363)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~-~-~~~vA~~~~iP~v~~ 144 (363)
...+....... .....+.+++++ .+||+|++..... + +..++...++|.|..
T Consensus 66 -~~~l~~~~~~~-~~~~~l~~~i~~--~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~ 119 (348)
T TIGR01133 66 -FRLIKTPLKLL-KAVFQARRILKK--FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHH 119 (348)
T ss_pred -HHHHHHHHHHH-HHHHHHHHHHHh--cCCCEEEEcCCcccHHHHHHHHHcCCCEEEE
Confidence 00111111111 122345566766 6899999875433 2 233566778998753
No 35
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=96.38 E-value=0.085 Score=47.63 Aligned_cols=118 Identities=21% Similarity=0.217 Sum_probs=67.1
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCE-EEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAI-VTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDL 87 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~-VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
.+++....+-||+.|.+.|+++|.+||++ |.++.+....+.... ....+.+..++.. ++.. ..
T Consensus 2 ~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~-------~~~~~~~~~I~~~----~~~~----~~- 65 (357)
T COG0707 2 KIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLV-------KQYGIEFELIPSG----GLRR----KG- 65 (357)
T ss_pred eEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeec-------cccCceEEEEecc----cccc----cC-
Confidence 46777778889999999999999999994 666644332221110 0113556655531 1111 00
Q ss_pred CCChhHHHHHHHHH--hchHHHHHHHHhCCCCCcEEEecCCCc--cHHHHHHHcCCCcEEEeccc
Q 039413 88 LPTTDFARFLNSLH--MLQLPFENLFERQTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 88 ~~~~~~~~~~~~~~--~~~~~~~~ll~~~~~~~d~vI~D~~~~--~~~~vA~~~~iP~v~~~~~~ 148 (363)
.+..+...+. ......++++++ .+||+||.=..+. ...-.|..+|+|.+..-+..
T Consensus 66 ----~~~~~~~~~~~~~~~~~a~~il~~--~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~ 124 (357)
T COG0707 66 ----SLKLLKAPFKLLKGVLQARKILKK--LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNA 124 (357)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCC
Confidence 0111111111 112345556666 6899999854443 33445567799998865443
No 36
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=95.87 E-value=0.27 Score=45.39 Aligned_cols=101 Identities=21% Similarity=0.309 Sum_probs=55.8
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCCChhHHHHHHHH---
Q 039413 24 MFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLPTTDFARFLNSL--- 100 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 100 (363)
+.+||++|+++||+|+++|....... .. +++++.++.... .. . .... ....+....
T Consensus 13 ~~~la~~L~~~G~~v~~~~~~~~~~~----------~~-~v~~~~~~~~~~----~~---~-~~~~--~~~~~~~~~~~~ 71 (396)
T cd03818 13 FRHLAPALAAQGHEVVFLTEPNAAPP----------PG-GVRVVRYRPPRG----PT---S-GTHP--YLREFEEAVLRG 71 (396)
T ss_pred HHHHHHHHHHCCCEEEEEecCCCCCC----------CC-CeeEEEecCCCC----CC---C-CCCc--cchhHHHHHHHH
Confidence 78999999999999999987543211 01 366666542110 00 0 0000 001111111
Q ss_pred HhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHc-CCCcEEEec
Q 039413 101 HMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKF-NVPRIIFHE 146 (363)
Q Consensus 101 ~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~-~iP~v~~~~ 146 (363)
..+...+..+..+ +.+||+|++-....++..+.+.+ ++|.|.+..
T Consensus 72 ~~~~~~~~~~~~~-~~~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~ 117 (396)
T cd03818 72 QAVARALLALRAK-GFRPDVIVAHPGWGETLFLKDVWPDAPLIGYFE 117 (396)
T ss_pred HHHHHHHHHHHhc-CCCCCEEEECCccchhhhHHHhCCCCCEEEEEe
Confidence 1222333333222 35799999887666666777776 488887653
No 37
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=95.68 E-value=0.054 Score=49.79 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=31.9
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
++|++..--.-||+.|. .|+++|.++|++|+++...
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~g 41 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVA 41 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEc
Confidence 47888888888999999 9999999999999998753
No 38
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=95.29 E-value=0.49 Score=44.02 Aligned_cols=38 Identities=24% Similarity=0.109 Sum_probs=31.5
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+.+|+++.....|+-.=+..++++|+++||+||+++..
T Consensus 3 ~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~ 40 (415)
T cd03816 3 RKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYL 40 (415)
T ss_pred ccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEec
Confidence 34677777777777777788999999999999999864
No 39
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=95.27 E-value=2.8 Score=39.69 Aligned_cols=41 Identities=22% Similarity=0.169 Sum_probs=30.6
Q ss_pred CCCceEEEEcCCC-----CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 5 ASQSHFLLLPFLA-----PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 5 ~~~~~lv~~p~p~-----~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.+++||+++.-+. -|=-+-+..++++|.++||+|+++++..
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~ 101 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDE 101 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3467888884332 2434677899999999999999999753
No 40
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=94.87 E-value=0.53 Score=41.15 Aligned_cols=31 Identities=29% Similarity=0.476 Sum_probs=27.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
+.||+.=.+.||++|.++||+|+|++.....
T Consensus 13 G~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~ 43 (279)
T TIGR03590 13 GLGHVMRCLTLARALHAQGAEVAFACKPLPG 43 (279)
T ss_pred cccHHHHHHHHHHHHHHCCCEEEEEeCCCCH
Confidence 6899999999999999999999999886544
No 41
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=94.73 E-value=0.043 Score=42.85 Aligned_cols=96 Identities=20% Similarity=0.235 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCCChhHHHHHHHHHh
Q 039413 23 PMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLPTTDFARFLNSLHM 102 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (363)
-+..|+++|+++||+||+++......... . ...++++..++.+.. +. .. ....+
T Consensus 6 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~------~~~~~~~~~~~~~~~----~~---~~------~~~~~------ 59 (160)
T PF13579_consen 6 YVRELARALAARGHEVTVVTPQPDPEDDE-E------EEDGVRVHRLPLPRR----PW---PL------RLLRF------ 59 (160)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE---GGG-S-E------EETTEEEEEE--S-S----SS---GG------GHCCH------
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCcccc-c------ccCCceEEeccCCcc----ch---hh------hhHHH------
Confidence 46789999999999999998654332110 0 112477777664211 00 00 00000
Q ss_pred chHHHHHHHHhCCCCCcEEEecCCC-ccHHHHHH-HcCCCcEEEe
Q 039413 103 LQLPFENLFERQTLKPCCIISDMCF-PWTVDTAA-KFNVPRIIFH 145 (363)
Q Consensus 103 ~~~~~~~ll~~~~~~~d~vI~D~~~-~~~~~vA~-~~~iP~v~~~ 145 (363)
...+.+++.....++|+|.+-... .+...+++ ..++|.|.-.
T Consensus 60 -~~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 103 (160)
T PF13579_consen 60 -LRRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTV 103 (160)
T ss_dssp -HHHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-
T ss_pred -HHHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEE
Confidence 122334442112689999877533 23344555 7789986654
No 42
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=94.41 E-value=0.61 Score=35.63 Aligned_cols=99 Identities=18% Similarity=0.242 Sum_probs=56.1
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCC
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLP 89 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (363)
|+++......| ...+++.|.++||+|++++.......... ..++++..++.+ ...
T Consensus 2 Il~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~--------~~~i~~~~~~~~---------~k~----- 56 (139)
T PF13477_consen 2 ILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEI--------IEGIKVIRLPSP---------RKS----- 56 (139)
T ss_pred EEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhH--------hCCeEEEEecCC---------CCc-----
Confidence 45555444444 56889999999999999998443221111 125777665421 000
Q ss_pred ChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCc-cHH-HHH-HHcC-CCcEE
Q 039413 90 TTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFP-WTV-DTA-AKFN-VPRII 143 (363)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~-~~~-~vA-~~~~-iP~v~ 143 (363)
. ..+.. .. .+.+++++ .++|+|.+-...+ +.. .+| ...+ +|.|.
T Consensus 57 --~-~~~~~----~~-~l~k~ik~--~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~ 104 (139)
T PF13477_consen 57 --P-LNYIK----YF-RLRKIIKK--EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIY 104 (139)
T ss_pred --c-HHHHH----HH-HHHHHhcc--CCCCEEEEecCChHHHHHHHHHHHcCCCCEEE
Confidence 0 11111 12 56677776 6799998776654 332 334 5567 67663
No 43
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=93.71 E-value=1.3 Score=39.61 Aligned_cols=104 Identities=23% Similarity=0.325 Sum_probs=60.9
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCCChhHHHHH
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLPTTDFARFL 97 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (363)
.-|+.-+.++.++|-++||+|.+.+-+.. ......+. -++.+..+-- .+ .+ ......
T Consensus 10 p~hvhfFk~~I~eL~~~GheV~it~R~~~--~~~~LL~~-----yg~~y~~iG~--------~g-~~-------~~~Kl~ 66 (335)
T PF04007_consen 10 PAHVHFFKNIIRELEKRGHEVLITARDKD--ETEELLDL-----YGIDYIVIGK--------HG-DS-------LYGKLL 66 (335)
T ss_pred chHHHHHHHHHHHHHhCCCEEEEEEeccc--hHHHHHHH-----cCCCeEEEcC--------CC-CC-------HHHHHH
Confidence 34999999999999999999998765432 22222211 1455555421 01 00 111222
Q ss_pred HHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEeccc
Q 039413 98 NSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 98 ~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~ 148 (363)
...... -.+-+++++ .+||++|+- ....+..+|.-+|+|.|.|.=+.
T Consensus 67 ~~~~R~-~~l~~~~~~--~~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e 113 (335)
T PF04007_consen 67 ESIERQ-YKLLKLIKK--FKPDVAISF-GSPEAARVAFGLGIPSIVFNDTE 113 (335)
T ss_pred HHHHHH-HHHHHHHHh--hCCCEEEec-CcHHHHHHHHHhCCCeEEEecCc
Confidence 222222 223334444 579999963 34556679999999999997653
No 44
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=93.70 E-value=0.54 Score=43.07 Aligned_cols=28 Identities=32% Similarity=0.426 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
-|+-..+..|+++|+++||+|++++...
T Consensus 21 GG~~~~~~~l~~~L~~~g~~V~v~~~~~ 48 (398)
T cd03800 21 GGQNVYVLELARALARLGHEVDIFTRRI 48 (398)
T ss_pred CceeehHHHHHHHHhccCceEEEEEecC
Confidence 4788899999999999999999998643
No 45
>PRK10307 putative glycosyl transferase; Provisional
Probab=93.37 E-value=1 Score=41.78 Aligned_cols=22 Identities=36% Similarity=0.466 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCCEEEEEeCCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~~ 45 (363)
...|+++|.++||+||++|+..
T Consensus 21 ~~~l~~~L~~~G~~V~vit~~~ 42 (412)
T PRK10307 21 TGEMAEWLAARGHEVRVITAPP 42 (412)
T ss_pred HHHHHHHHHHCCCeEEEEecCC
Confidence 5799999999999999999753
No 46
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.24 E-value=1.2 Score=40.26 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=29.8
Q ss_pred eEEEEcCC-CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLPFL-APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p~p-~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
+|+++.+| .-|.-.-...+++.|+++||+|++++...
T Consensus 2 ki~~~~~p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~ 39 (371)
T cd04962 2 KIGIVCYPTYGGSGVVATELGKALARRGHEVHFITSSR 39 (371)
T ss_pred ceeEEEEeCCCCccchHHHHHHHHHhcCCceEEEecCC
Confidence 45555554 45888889999999999999999998753
No 47
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=93.13 E-value=1.4 Score=39.32 Aligned_cols=29 Identities=31% Similarity=0.393 Sum_probs=25.7
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
-|+-.-...++++|+++||+|+++++...
T Consensus 15 gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 43 (359)
T cd03823 15 GGAEVVAHDLAEALAKRGHEVAVLTAGED 43 (359)
T ss_pred cchHHHHHHHHHHHHhcCCceEEEeCCCC
Confidence 58889999999999999999999987543
No 48
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=92.88 E-value=0.64 Score=41.14 Aligned_cols=57 Identities=18% Similarity=0.321 Sum_probs=42.9
Q ss_pred CCceEEEEc--CCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEec
Q 039413 6 SQSHFLLLP--FLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQ 70 (363)
Q Consensus 6 ~~~~lv~~p--~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 70 (363)
+.+++++.. ..+-||..=.+.+|+.|++. |.+|+++|......-+.. ..+++++.+|
T Consensus 8 ~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~--------~~gVd~V~LP 68 (400)
T COG4671 8 KRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPG--------PAGVDFVKLP 68 (400)
T ss_pred ccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCC--------cccCceEecC
Confidence 345888888 45789999999999999997 999999998654332211 1358888876
No 49
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=92.77 E-value=2.3 Score=33.91 Aligned_cols=43 Identities=21% Similarity=0.204 Sum_probs=33.0
Q ss_pred chHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHc-CCCcEEEec
Q 039413 103 LQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKF-NVPRIIFHE 146 (363)
Q Consensus 103 ~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~-~iP~v~~~~ 146 (363)
+...+.+|.++ +-.||+||.-.-...++-+-+.+ ++|.+++.=
T Consensus 53 v~~a~~~L~~~-Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 53 VARAARQLRAQ-GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred HHHHHHHHHHc-CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 44556666655 56789999998777788888889 899988753
No 50
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=92.28 E-value=1.7 Score=39.06 Aligned_cols=28 Identities=29% Similarity=0.324 Sum_probs=25.6
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.|+-.-...++++|+++||+|++++...
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~ 41 (394)
T cd03794 14 GGGAFRTTELAEELVKRGHEVTVITGSP 41 (394)
T ss_pred CCcceeHHHHHHHHHhCCceEEEEecCC
Confidence 5999999999999999999999998754
No 51
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=91.82 E-value=2.1 Score=39.12 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=30.3
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
++|++..-..-||+.|.. ++++|.++++++.++..
T Consensus 2 ~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~ 36 (380)
T PRK00025 2 LRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGV 36 (380)
T ss_pred ceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEE
Confidence 378888888899999998 99999998888887754
No 52
>PLN00142 sucrose synthase
Probab=91.15 E-value=1.8 Score=43.47 Aligned_cols=36 Identities=19% Similarity=0.130 Sum_probs=25.7
Q ss_pred HHHHhCCCCCcEEEecCCCc--cHHHHHHHcCCCcEEE
Q 039413 109 NLFERQTLKPCCIISDMCFP--WTVDTAAKFNVPRIIF 144 (363)
Q Consensus 109 ~ll~~~~~~~d~vI~D~~~~--~~~~vA~~~~iP~v~~ 144 (363)
.+.++...+||+|.+-...+ .+..+|+++|+|.+..
T Consensus 400 ~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T 437 (815)
T PLN00142 400 EILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTI 437 (815)
T ss_pred HHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEE
Confidence 34343335799999887664 3467999999998765
No 53
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=90.09 E-value=0.43 Score=34.08 Aligned_cols=63 Identities=22% Similarity=0.294 Sum_probs=48.0
Q ss_pred hhhccccCCCCCCcEEEEecCCCcCC---Ch--hHHHHHHHHHhhCCCCeEEEEeCCcchhhhhhccchhh
Q 039413 268 PECLTWLDSQQPTSVVYVCLGSICNL---PS--SQLIELGLGLEASNKPFVWVIRGESKLEELEKWLVEEN 333 (363)
Q Consensus 268 ~~~~~wLd~~~~~sVIyvsfGS~~~l---~~--~~~~~~~~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~ 333 (363)
..+..||...+.+.-|.+++||.... +. ..+.+++++++.++.-++-.+...... .+.+ +|+|
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~-~lg~--lP~n 95 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRA-ELGE--LPDN 95 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCG-GCCS---TTT
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHH-hhCC--CCCC
Confidence 55778999988888999999997642 33 579999999999999999988765332 3344 6765
No 54
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=89.83 E-value=8.5 Score=38.72 Aligned_cols=119 Identities=17% Similarity=0.185 Sum_probs=59.3
Q ss_pred CCCHHHHHHHHHH--------HHhCCC----EEEEEeCCCChhhhHHHhhh--hhccCCceeEEEecCCCccCCCCCCCC
Q 039413 18 PGHMIPMFDTARL--------LAQRGA----IVTIVTTPVNAARFKTVHAR--AIDSGLQIRLIEIQFPWQQAGLPEGCE 83 (363)
Q Consensus 18 ~gH~~p~l~La~~--------La~rGh----~VT~~t~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~ 83 (363)
-|+..=.+.++++ |+++|| +|+++|--.....-....+. ......+++++.+|+... ....
T Consensus 279 GGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~~~~I~rvp~g~~-----~~~~ 353 (784)
T TIGR02470 279 GGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPFRTE-----NGII 353 (784)
T ss_pred CCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccccccCCCceEEEEecCCCC-----cccc
Confidence 5777778888886 568999 77788853221100000000 000123567777664211 1100
Q ss_pred CCCCCCChhHHHHHHHHHhchHHH-HHHHHhCCCCCcEEEecCCCc--cHHHHHHHcCCCcEEE
Q 039413 84 NCDLLPTTDFARFLNSLHMLQLPF-ENLFERQTLKPCCIISDMCFP--WTVDTAAKFNVPRIIF 144 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~-~~ll~~~~~~~d~vI~D~~~~--~~~~vA~~~~iP~v~~ 144 (363)
...-.+. ..++..+......+ +.+.++.+.+||+|++-...+ .+..+|+++|+|.+..
T Consensus 354 ~~~~i~k---~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP~v~t 414 (784)
T TIGR02470 354 LRNWISR---FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQCTI 414 (784)
T ss_pred cccccCH---HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCCEEEE
Confidence 0001111 12222233232223 333333335799999876554 3467889999997654
No 55
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=89.00 E-value=3.6 Score=37.91 Aligned_cols=28 Identities=39% Similarity=0.463 Sum_probs=24.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
..|--.-...|+++|+++||+||++++.
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~ 46 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRA 46 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecc
Confidence 3577788999999999999999999975
No 56
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=88.89 E-value=4.3 Score=38.08 Aligned_cols=26 Identities=35% Similarity=0.432 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHhCCC--EEEEEeCC
Q 039413 19 GHMIPMFDTARLLAQRGA--IVTIVTTP 44 (363)
Q Consensus 19 gH~~p~l~La~~La~rGh--~VT~~t~~ 44 (363)
|=-.-+..|+++|+++|| +|+++|..
T Consensus 27 G~~~~v~~La~~L~~~G~~~~V~v~t~~ 54 (439)
T TIGR02472 27 GQTKYVLELARALARRSEVEQVDLVTRL 54 (439)
T ss_pred CcchHHHHHHHHHHhCCCCcEEEEEecc
Confidence 444567899999999998 99999963
No 57
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=88.82 E-value=5.5 Score=36.71 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=23.2
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
-|--.-...|+++|+++||+|+++++.
T Consensus 14 GG~e~~~~~la~~L~~~G~~V~v~~~~ 40 (398)
T cd03796 14 GGVETHIYQLSQCLIKRGHKVVVITHA 40 (398)
T ss_pred ccHHHHHHHHHHHHHHcCCeeEEEecc
Confidence 355677899999999999999999974
No 58
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=87.89 E-value=9.4 Score=33.80 Aligned_cols=28 Identities=21% Similarity=0.132 Sum_probs=23.8
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
-|--.-...|+++|.++||+|++++...
T Consensus 19 GG~~~~~~~l~~~L~~~g~~V~v~~~~~ 46 (335)
T cd03802 19 GGTERVVAALTEGLVARGHEVTLFASGD 46 (335)
T ss_pred CcHHHHHHHHHHHHHhcCceEEEEecCC
Confidence 3556778999999999999999998753
No 59
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=87.05 E-value=8 Score=34.59 Aligned_cols=27 Identities=22% Similarity=0.261 Sum_probs=23.5
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
-|--.-...|+++|+++||+|++++..
T Consensus 10 gG~e~~~~~l~~~L~~~g~~v~v~~~~ 36 (355)
T cd03819 10 GGVERGTLELARALVERGHRSLVASAG 36 (355)
T ss_pred CcHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 566678899999999999999999864
No 60
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=87.00 E-value=12 Score=34.15 Aligned_cols=26 Identities=38% Similarity=0.368 Sum_probs=22.0
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 19 GHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 19 gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
|=-.-+..|+++|+++||+||++|+.
T Consensus 14 G~e~~~~~la~~L~~~G~~V~v~~~~ 39 (392)
T cd03805 14 GAERLVVDAALALQSRGHEVTIYTSH 39 (392)
T ss_pred hHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 44456789999999999999999874
No 61
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=86.72 E-value=10 Score=39.34 Aligned_cols=27 Identities=22% Similarity=0.230 Sum_probs=23.5
Q ss_pred CCCHHHHHHHHHHHHhCC--CEEEEEeCC
Q 039413 18 PGHMIPMFDTARLLAQRG--AIVTIVTTP 44 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rG--h~VT~~t~~ 44 (363)
-|+..=...||++|+++| |+|+++|-.
T Consensus 195 GGq~vYV~ELAraLa~~~gv~~Vdl~TR~ 223 (1050)
T TIGR02468 195 GGQVKYVVELARALGSMPGVYRVDLLTRQ 223 (1050)
T ss_pred CChHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 367778899999999998 899999864
No 62
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=86.08 E-value=3.8 Score=34.78 Aligned_cols=29 Identities=31% Similarity=0.288 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 039413 20 HMIPMFDTARLLAQRGAIVTIVTTPVNAAR 49 (363)
Q Consensus 20 H~~p~l~La~~La~rGh~VT~~t~~~~~~~ 49 (363)
|---+..|++.|. .+++||++.++.+.+-
T Consensus 12 ~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg 40 (252)
T COG0496 12 HAPGIRALARALR-EGADVTVVAPDREQSG 40 (252)
T ss_pred CCHHHHHHHHHHh-hCCCEEEEccCCCCcc
Confidence 3345677888888 9999999998766543
No 63
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=83.10 E-value=1.5 Score=34.63 Aligned_cols=28 Identities=39% Similarity=0.476 Sum_probs=22.5
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
-|=-.-+..|+++|+++||+||+++...
T Consensus 12 GG~e~~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 12 GGAERVVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEESS-
T ss_pred ChHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4666778999999999999999998753
No 64
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=82.76 E-value=2.5 Score=36.33 Aligned_cols=97 Identities=20% Similarity=0.117 Sum_probs=61.4
Q ss_pred ceEEEEcCC----CCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCC
Q 039413 8 SHFLLLPFL----APGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCE 83 (363)
Q Consensus 8 ~~lv~~p~p----~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 83 (363)
+||+++.-. +.||+.=.+.||++|.+||..++|++.......+....+ .+.+. ...
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~~-------~f~~~------------~~~- 60 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVYE-------GFKVL------------EGR- 60 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhhh-------hccce------------eee-
Confidence 366666643 679999999999999999999999987543321111100 00000 000
Q ss_pred CCCCCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCcc---HHHHHHHcCCCcEEEecccH
Q 039413 84 NCDLLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPW---TVDTAAKFNVPRIIFHEFSC 149 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~---~~~vA~~~~iP~v~~~~~~~ 149 (363)
. .+ .+.+ .+||++|.|.+..- ...+..+.+.+.+.|=....
T Consensus 61 ---------------~---~n-----~ik~--~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~ 104 (318)
T COG3980 61 ---------------G---NN-----LIKE--EKFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENA 104 (318)
T ss_pred ---------------c---cc-----cccc--ccCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCc
Confidence 0 00 3333 68999999987653 34677788999988855443
No 65
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=82.67 E-value=2.7 Score=32.96 Aligned_cols=35 Identities=29% Similarity=0.139 Sum_probs=29.3
Q ss_pred EEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEE
Q 039413 282 VVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVI 316 (363)
Q Consensus 282 VIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~ 316 (363)
.+|+|+||+..-+.++++....+|.+.+.--+++.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 58999999999888999999999998886445553
No 66
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=81.28 E-value=23 Score=31.17 Aligned_cols=29 Identities=34% Similarity=0.379 Sum_probs=26.2
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
.|+..-+..+++.|.+.||+|++++....
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~i~~~~~~ 42 (374)
T cd03801 14 GGAERHVLELARALAARGHEVTVLTPGDG 42 (374)
T ss_pred CcHhHHHHHHHHHHHhcCceEEEEecCCC
Confidence 68999999999999999999999987543
No 67
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=81.20 E-value=25 Score=28.12 Aligned_cols=29 Identities=24% Similarity=0.240 Sum_probs=20.9
Q ss_pred CCCCCCHHHHHHHHHHH-HhCCCEEEEEeC
Q 039413 15 FLAPGHMIPMFDTARLL-AQRGAIVTIVTT 43 (363)
Q Consensus 15 ~p~~gH~~p~l~La~~L-a~rGh~VT~~t~ 43 (363)
..+-||..=|+.|.+.+ -++....+++.+
T Consensus 5 ~gsGGHt~eml~L~~~~~~~~~~~~~~ivt 34 (170)
T PF08660_consen 5 LGSGGHTAEMLRLLKALDNDRYQPRTYIVT 34 (170)
T ss_pred EcCcHHHHHHHHHHHHhhhhcCCCcEEEEE
Confidence 45789999999999999 445444444433
No 68
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=81.20 E-value=2.6 Score=37.67 Aligned_cols=28 Identities=18% Similarity=0.202 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.|+...+..|+++|+++||+|+++++..
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~ 41 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLVIAPGP 41 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEEEeCCc
Confidence 6899999999999999999999998754
No 69
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=80.81 E-value=8.1 Score=32.92 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCChhh
Q 039413 23 PMFDTARLLAQRGAIVTIVTTPVNAAR 49 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~~~~~~~ 49 (363)
-+..|.++|.+.| +|+++.+....+.
T Consensus 15 Gi~aL~~~l~~~g-~V~VvAP~~~~Sg 40 (244)
T TIGR00087 15 GIRALYQALKELG-EVTVVAPARQRSG 40 (244)
T ss_pred hHHHHHHHHHhCC-CEEEEeCCCCccc
Confidence 4678889998888 8999988765543
No 70
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=80.64 E-value=16 Score=32.31 Aligned_cols=30 Identities=33% Similarity=0.298 Sum_probs=26.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
..|+..-+..+++.|.+.||+|++++....
T Consensus 13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~ 42 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPW 42 (377)
T ss_pred CchHHHHHHHHHHHHHHCCCceEEEecCCC
Confidence 478999999999999999999999987643
No 71
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=80.09 E-value=2.8 Score=38.41 Aligned_cols=37 Identities=22% Similarity=0.254 Sum_probs=29.9
Q ss_pred CceEEEEcCC-CCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 7 QSHFLLLPFL-APGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 7 ~~~lv~~p~p-~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.++|+++... +.||..+..+|+++|.++||+|+++..
T Consensus 4 ~~rili~t~~~G~GH~~~a~al~~~l~~~g~~~~~~~d 41 (380)
T PRK13609 4 NPKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCD 41 (380)
T ss_pred CCeEEEEEcCCCchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3477777755 569999999999999999998766654
No 72
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=80.06 E-value=8.2 Score=33.10 Aligned_cols=41 Identities=17% Similarity=0.075 Sum_probs=26.9
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
++++|++.-==+. |---+..|+++|.+.| +|+++.+....+
T Consensus 4 ~~M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~~~~S 44 (257)
T PRK13932 4 KKPHILVCNDDGI-EGEGIHVLAASMKKIG-RVTVVAPAEPHS 44 (257)
T ss_pred CCCEEEEECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCCCCCC
Confidence 4567776652222 2235778888888878 799988866544
No 73
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=79.81 E-value=7.1 Score=29.92 Aligned_cols=44 Identities=16% Similarity=0.029 Sum_probs=37.7
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAAR 49 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~ 49 (363)
++.++++...++-+|-.-..-++..|.++|++|+++-..-..+.
T Consensus 2 ~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~ 45 (137)
T PRK02261 2 KKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEE 45 (137)
T ss_pred CCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 56689999999999999999999999999999999876544443
No 74
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=78.77 E-value=3 Score=37.00 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=31.0
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
|+++.....|+...+..++++|.++||+|++++.....
T Consensus 2 Il~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~ 39 (359)
T cd03808 2 ILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDE 39 (359)
T ss_pred eeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCc
Confidence 45555557888999999999999999999999876443
No 75
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=76.66 E-value=8.4 Score=28.53 Aligned_cols=38 Identities=24% Similarity=0.143 Sum_probs=32.7
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
++++.+.++..|....+-++..|.++|++|+++-....
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~ 38 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVP 38 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 47888999999999999999999999999988765433
No 76
>PLN02846 digalactosyldiacylglycerol synthase
Probab=76.65 E-value=4.2 Score=38.26 Aligned_cols=40 Identities=23% Similarity=0.286 Sum_probs=31.1
Q ss_pred CCceEEEEcCCC----CCCHHHHHHHHHHHHhCC-CEEEEEeCCC
Q 039413 6 SQSHFLLLPFLA----PGHMIPMFDTARLLAQRG-AIVTIVTTPV 45 (363)
Q Consensus 6 ~~~~lv~~p~p~----~gH~~p~l~La~~La~rG-h~VT~~t~~~ 45 (363)
+++||++|+-.. -|=..-.+.++..|++|| |+||++.+..
T Consensus 3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~ 47 (462)
T PLN02846 3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWL 47 (462)
T ss_pred CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCC
Confidence 467999998554 355466677888999999 8999998743
No 77
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=76.61 E-value=13 Score=31.94 Aligned_cols=24 Identities=25% Similarity=0.188 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 24 MFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
+..|+++|.+ +|+|+++.+....+
T Consensus 16 l~aL~~~l~~-~~~V~VvAP~~~~S 39 (253)
T PRK13933 16 INTLAELLSK-YHEVIIVAPENQRS 39 (253)
T ss_pred HHHHHHHHHh-CCcEEEEccCCCCc
Confidence 7788888865 68999998876544
No 78
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=76.07 E-value=4.9 Score=35.91 Aligned_cols=30 Identities=23% Similarity=0.227 Sum_probs=26.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 16 LAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 16 p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
...|+-.-...++++|+++||+|+++++..
T Consensus 12 ~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~ 41 (374)
T cd03817 12 QVNGVATSIRRLAEELEKRGHEVYVVAPSY 41 (374)
T ss_pred CCCCeehHHHHHHHHHHHcCCeEEEEeCCC
Confidence 457899999999999999999999998754
No 79
>PRK00654 glgA glycogen synthase; Provisional
Probab=75.73 E-value=4.5 Score=38.30 Aligned_cols=29 Identities=17% Similarity=0.019 Sum_probs=24.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.-|.-.....|+++|+++||+|+++++..
T Consensus 16 ~GGl~~~v~~L~~~L~~~G~~V~v~~p~y 44 (466)
T PRK00654 16 TGGLGDVVGALPKALAALGHDVRVLLPGY 44 (466)
T ss_pred cCcHHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 34777788999999999999999999743
No 80
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=75.15 E-value=18 Score=33.46 Aligned_cols=29 Identities=21% Similarity=0.148 Sum_probs=24.5
Q ss_pred EcCCCCCCHHHHHHHHHHHHhCCCEEEEE
Q 039413 13 LPFLAPGHMIPMFDTARLLAQRGAIVTIV 41 (363)
Q Consensus 13 ~p~p~~gH~~p~l~La~~La~rGh~VT~~ 41 (363)
-|..+.|-....+.|+++|.+||++|--+
T Consensus 7 g~~SG~GKTTvT~glm~aL~~rg~~Vqpf 35 (451)
T COG1797 7 GTSSGSGKTTVTLGLMRALRRRGLKVQPF 35 (451)
T ss_pred cCCCCCcHHHHHHHHHHHHHhcCCccccc
Confidence 34557899999999999999999998744
No 81
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=74.31 E-value=36 Score=31.69 Aligned_cols=115 Identities=20% Similarity=0.261 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHHHhC--CCEEEEEeCCCChhh---hHHHhhhhh-ccCCceeEEEec-CCCccCCCCCCCCCCCCCCCh
Q 039413 19 GHMIPMFDTARLLAQR--GAIVTIVTTPVNAAR---FKTVHARAI-DSGLQIRLIEIQ-FPWQQAGLPEGCENCDLLPTT 91 (363)
Q Consensus 19 gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~~---~~~~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 91 (363)
|==..+...++.|.++ ||+||++|+...... +.+...... ....+++++.+. .- ..++.. ...
T Consensus 15 g~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~---~~~~~~--~~~----- 84 (419)
T cd03806 15 GGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYR---KLVEAS--TYP----- 84 (419)
T ss_pred CchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecce---eeeccc--cCC-----
Confidence 4445677888899887 899999998755432 211111100 001123433221 00 011111 000
Q ss_pred hHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHc-CCCcEEEec
Q 039413 92 DFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKF-NVPRIIFHE 146 (363)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~-~iP~v~~~~ 146 (363)
.+..+......+.-.++.+.. .+||++|.+.-.+.+..+++.+ ++|.|...-
T Consensus 85 r~~~~~~~~~~~~~~~~~~~~---~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h 137 (419)
T cd03806 85 RFTLLGQALGSMILGLEALLK---LVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVH 137 (419)
T ss_pred ceeeHHHHHHHHHHHHHHHHh---cCCCEEEEcCCcccHHHHHHHhcCCeEEEEec
Confidence 111122222222233333332 3699888887677777777764 688777644
No 82
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=74.03 E-value=5.2 Score=35.93 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=30.1
Q ss_pred eEEEEcCC-C-CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLPFL-A-PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p~p-~-~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
+|+++... + .|+-.-...++++|.++||+|++++...
T Consensus 2 kIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~ 40 (365)
T cd03825 2 KVLHLNTSDISGGAARAAYRLHRALQAAGVDSTMLVQEK 40 (365)
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHHHhcCCceeEEEeec
Confidence 56666533 3 6889999999999999999999998753
No 83
>PLN02275 transferase, transferring glycosyl groups
Probab=73.35 E-value=73 Score=29.00 Aligned_cols=38 Identities=21% Similarity=0.118 Sum_probs=28.5
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCC-EEEEEeCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGA-IVTIVTTPV 45 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh-~VT~~t~~~ 45 (363)
.+.||++. +-.|.---+..++.+|+++|| +||+++...
T Consensus 5 ~~~~~~~~--~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~ 43 (371)
T PLN02275 5 GRAAVVVL--GDFGRSPRMQYHALSLARQASFQVDVVAYGG 43 (371)
T ss_pred cEEEEEEe--cCCCCCHHHHHHHHHHHhcCCceEEEEEecC
Confidence 34455444 677777888899999999986 799998643
No 84
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=72.53 E-value=17 Score=31.06 Aligned_cols=26 Identities=15% Similarity=0.087 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 22 IPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 22 ~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
--+..|+++|.+ +|+|+++.+....+
T Consensus 14 ~Gi~aL~~~l~~-~~~V~VvAP~~~qS 39 (253)
T PRK13935 14 PGIIILAEYLSE-KHEVFVVAPDKERS 39 (253)
T ss_pred HHHHHHHHHHHh-CCcEEEEccCCCCc
Confidence 346778888865 57999998876544
No 85
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=70.65 E-value=39 Score=30.62 Aligned_cols=111 Identities=13% Similarity=0.028 Sum_probs=60.4
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDL 87 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
+|++ -...+.|+.-+.++.++|.++ +.++.++.|-.+........+. -++. ..+. +. ... ..
T Consensus 2 ~i~~-~~gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~-----~~i~-~~~~-------~~--~~~-~~ 64 (365)
T TIGR00236 2 KVSI-VLGTRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDL-----FHLP-PDYD-------LN--IMS-PG 64 (365)
T ss_pred eEEE-EEecCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHh-----cCCC-CCee-------ee--cCC-CC
Confidence 3443 347889999999999999986 6777777665444332222110 0111 0010 00 000 00
Q ss_pred CCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEe--cCCCc-cHHHHHHHcCCCcEEE
Q 039413 88 LPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIIS--DMCFP-WTVDTAAKFNVPRIIF 144 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~--D~~~~-~~~~vA~~~~iP~v~~ 144 (363)
. .. ..........+.+++++ .+||+|++ |.... ++..+|.++|+|++.+
T Consensus 65 ~---~~---~~~~~~~~~~l~~~l~~--~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~ 116 (365)
T TIGR00236 65 Q---TL---GEITSNMLEGLEELLLE--EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHV 116 (365)
T ss_pred C---CH---HHHHHHHHHHHHHHHHH--cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEE
Confidence 0 11 11111223456667776 57899886 44433 3566778899998865
No 86
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=70.57 E-value=25 Score=30.08 Aligned_cols=26 Identities=23% Similarity=0.110 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 22 IPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 22 ~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
--+..|+++|.+. |+|+++.+....+
T Consensus 14 ~Gi~aL~~~l~~~-~~V~VvAP~~~qS 39 (250)
T PRK00346 14 PGIRALAEALREL-ADVTVVAPDRERS 39 (250)
T ss_pred hhHHHHHHHHHhC-CCEEEEeCCCCCc
Confidence 3477889999888 7999998865544
No 87
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=70.41 E-value=8.4 Score=35.47 Aligned_cols=32 Identities=31% Similarity=0.347 Sum_probs=26.4
Q ss_pred EcCC-CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 13 LPFL-APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 13 ~p~p-~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
+|+| -.|.-+=+-+++++|+++ |+||++|...
T Consensus 8 ~P~P~~~G~~~r~~~~~~~L~~~-~~v~l~~~~~ 40 (397)
T TIGR03087 8 IPYPPNKGDKIRSFHLLRHLAAR-HRVHLGTFVD 40 (397)
T ss_pred CCCCCCCCCcEeHHHHHHHHHhc-CcEEEEEeCC
Confidence 5666 468899999999999776 9999998754
No 88
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=69.76 E-value=22 Score=26.18 Aligned_cols=42 Identities=19% Similarity=0.204 Sum_probs=35.1
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARF 50 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~ 50 (363)
++++...+..-|-..+.-++..|.++||+|.++-.....+.+
T Consensus 2 ~v~~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~~~~~~l 43 (121)
T PF02310_consen 2 RVVLACVPGEVHPLGLLYLAAYLRKAGHEVDILDANVPPEEL 43 (121)
T ss_dssp EEEEEEBTTSSTSHHHHHHHHHHHHTTBEEEEEESSB-HHHH
T ss_pred EEEEEeeCCcchhHHHHHHHHHHHHCCCeEEEECCCCCHHHH
Confidence 688899999999999999999999999999998665433333
No 89
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=69.56 E-value=8.7 Score=36.42 Aligned_cols=29 Identities=17% Similarity=0.072 Sum_probs=24.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.-|=-...-.|+++|+++||+|+++++..
T Consensus 16 ~GGl~~~v~~L~~aL~~~G~~v~v~~p~y 44 (473)
T TIGR02095 16 TGGLADVVGALPKALAALGHDVRVLLPAY 44 (473)
T ss_pred cCcHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 34666788999999999999999999754
No 90
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=69.11 E-value=29 Score=32.27 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=24.7
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCE
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAI 37 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~ 37 (363)
.++-+--.+-|.+.-...|+++|.+++++
T Consensus 51 ~~iW~Ha~s~Ge~~~~~~l~~~l~~~~~~ 79 (425)
T PRK05749 51 PLIWFHAVSVGETRAAIPLIRALRKRYPD 79 (425)
T ss_pred CeEEEEeCCHHHHHHHHHHHHHHHHhCCC
Confidence 45667778889999999999999998755
No 91
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=68.67 E-value=67 Score=28.25 Aligned_cols=32 Identities=6% Similarity=-0.072 Sum_probs=27.3
Q ss_pred cCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 14 PFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 14 p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.+..-|+-.....|+++|.++||+|.+++...
T Consensus 8 ~~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~ 39 (365)
T cd03807 8 GLDVGGAERMLVRLLKGLDRDRFEHVVISLTD 39 (365)
T ss_pred eccCccHHHHHHHHHHHhhhccceEEEEecCc
Confidence 34457899999999999999999999998643
No 92
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=68.17 E-value=8.3 Score=31.59 Aligned_cols=26 Identities=35% Similarity=0.523 Sum_probs=24.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
..|+-.....|++.|.++||+|+++.
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~v~v~~ 37 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA 37 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCeEEEEE
Confidence 67999999999999999999999988
No 93
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=67.97 E-value=6.3 Score=35.28 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.-|+......|+++|.++||+|++++..
T Consensus 11 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~ 38 (360)
T cd04951 11 LGGAEKQVVDLADQFVAKGHQVAIISLT 38 (360)
T ss_pred CCCHHHHHHHHHHhcccCCceEEEEEEe
Confidence 4688999999999999999999999753
No 94
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=67.86 E-value=91 Score=28.85 Aligned_cols=100 Identities=16% Similarity=0.333 Sum_probs=63.2
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEe-CCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVT-TPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENC 85 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 85 (363)
-++-+--.+.|=++-..+|.++|-++ +..+++-| |+.-.+.++... +..+....+|+ +
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~------~~~v~h~YlP~---------D---- 110 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALF------GDSVIHQYLPL---------D---- 110 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHc------CCCeEEEecCc---------C----
Confidence 47788888999999999999999999 88888766 332233333221 11233333332 0
Q ss_pred CCCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcE-EEecC-CCccHHHHHHHcCCCcEEEec
Q 039413 86 DLLPTTDFARFLNSLHMLQLPFENLFERQTLKPCC-IISDM-CFPWTVDTAAKFNVPRIIFHE 146 (363)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~-vI~D~-~~~~~~~vA~~~~iP~v~~~~ 146 (363)
+...+.++++. -++|+ ||+|. +.+....-+++.|+|.+.+..
T Consensus 111 -----------------~~~~v~rFl~~--~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNa 154 (419)
T COG1519 111 -----------------LPIAVRRFLRK--WRPKLLIIMETELWPNLINELKRRGIPLVLVNA 154 (419)
T ss_pred -----------------chHHHHHHHHh--cCCCEEEEEeccccHHHHHHHHHcCCCEEEEee
Confidence 11234556655 46664 55775 345566778899999988754
No 95
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=66.90 E-value=9.8 Score=29.51 Aligned_cols=38 Identities=24% Similarity=0.169 Sum_probs=30.7
Q ss_pred CCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEe
Q 039413 279 PTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIR 317 (363)
Q Consensus 279 ~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~ 317 (363)
..-+|.+++||+-....++++++++.+. .+.+++|.--
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 3459999999999888999999999885 3577888543
No 96
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=66.87 E-value=43 Score=28.87 Aligned_cols=26 Identities=8% Similarity=0.000 Sum_probs=18.3
Q ss_pred HHHHHHHHHHhC---CCEEEEEeCCCChh
Q 039413 23 PMFDTARLLAQR---GAIVTIVTTPVNAA 48 (363)
Q Consensus 23 p~l~La~~La~r---Gh~VT~~t~~~~~~ 48 (363)
-+..|+++|.+. |++|+++.+....+
T Consensus 15 Gl~aL~~~l~~~~~~~~~V~VVAP~~eqS 43 (261)
T PRK13931 15 GLEVLEQIATELAGPDGEVWTVAPAFEQS 43 (261)
T ss_pred hHHHHHHHHHHhccCCCeEEEEeCCCCCC
Confidence 456677777663 47999998876544
No 97
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=66.62 E-value=9.9 Score=33.88 Aligned_cols=30 Identities=27% Similarity=0.323 Sum_probs=26.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
..|+......++++|+++||+|+++++...
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 42 (375)
T cd03821 13 YGGPVRVVLNLSKALAKLGHEVTVATTDAG 42 (375)
T ss_pred cCCeehHHHHHHHHHHhcCCcEEEEecCCC
Confidence 569999999999999999999999987543
No 98
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=65.93 E-value=11 Score=28.16 Aligned_cols=36 Identities=11% Similarity=-0.075 Sum_probs=22.9
Q ss_pred eEEEEcCCCCC---CHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPFLAPG---HMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p~~g---H~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+|+++--|-.+ .-..-..|+.+-.+|||+|.++...
T Consensus 2 ki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 2 KIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred eEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 45555555433 3456678899999999999999864
No 99
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=64.96 E-value=65 Score=29.37 Aligned_cols=113 Identities=14% Similarity=0.123 Sum_probs=59.4
Q ss_pred EcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCCChhh-----hHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCC
Q 039413 13 LPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPVNAAR-----FKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCD 86 (363)
Q Consensus 13 ~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (363)
+-+.++..++=|.++.++|.+. +.++.++.|-.+... ...... . ++... + .+.-......
T Consensus 5 ~v~GtRpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~----~--~~~~~--~------~~~~~~~~~~ 70 (365)
T TIGR03568 5 VVTGTRADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEK----D--GFDID--E------KIEILLDSDS 70 (365)
T ss_pred EEEecChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHH----c--CCCCC--C------ccccccCCCC
Confidence 3346888899999999999974 788888776433221 111110 0 11110 0 0000000000
Q ss_pred CCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEe--cCCCc-cHHHHHHHcCCCcEEEecc
Q 039413 87 LLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIIS--DMCFP-WTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~--D~~~~-~~~~vA~~~~iP~v~~~~~ 147 (363)
. ..+ ..........+.+++++ .+||+||+ |.+.. .+...|..+|||++.+-..
T Consensus 71 ~---~~~---~~~~~~~~~~~~~~~~~--~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG 126 (365)
T TIGR03568 71 N---AGM---AKSMGLTIIGFSDAFER--LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGG 126 (365)
T ss_pred C---CCH---HHHHHHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECC
Confidence 0 011 11222234456667766 57888774 55544 4456778899999965443
No 100
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=63.84 E-value=12 Score=35.40 Aligned_cols=28 Identities=18% Similarity=0.068 Sum_probs=23.5
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
-|=-.....|+++|+++||+|+++++..
T Consensus 16 GGl~~~~~~L~~aL~~~G~~V~Vi~p~y 43 (476)
T cd03791 16 GGLGDVVGALPKALAKLGHDVRVIMPKY 43 (476)
T ss_pred CcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3555677889999999999999999753
No 101
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=62.79 E-value=50 Score=29.74 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=26.5
Q ss_pred EcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCC
Q 039413 13 LPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPV 45 (363)
Q Consensus 13 ~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~ 45 (363)
+-+.++..+.=+.++.++|.++ |+++.++.|..
T Consensus 4 ~~~gtr~~~~~~~pl~~~l~~~~~~~~~~~~tg~ 37 (363)
T cd03786 4 VVTGTRPEYIKLAPLIRALKKDPGFELVLVVTGQ 37 (363)
T ss_pred EEEecCHHHHHHHHHHHHHhcCCCCCEEEEEeCC
Confidence 3346788888899999999987 99999876643
No 102
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=62.64 E-value=16 Score=31.97 Aligned_cols=30 Identities=30% Similarity=0.312 Sum_probs=25.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
..|....+..++++|+++||+|++++....
T Consensus 12 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 41 (348)
T cd03820 12 AGGAERVLSNLANALAEKGHEVTIISLDKG 41 (348)
T ss_pred CCChHHHHHHHHHHHHhCCCeEEEEecCCC
Confidence 457777888999999999999999987544
No 103
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=62.22 E-value=8.5 Score=32.32 Aligned_cols=26 Identities=19% Similarity=0.091 Sum_probs=20.1
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 20 HMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 20 H~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
|+..|.+.+.+|.++|++|+++....
T Consensus 47 ~~saMRhfa~~L~~~G~~V~Y~~~~~ 72 (224)
T PF04244_consen 47 FFSAMRHFADELRAKGFRVHYIELDD 72 (224)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE-TT-
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 56789999999999999999998763
No 104
>PRK05595 replicative DNA helicase; Provisional
Probab=62.19 E-value=88 Score=29.46 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=33.4
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHH-hCCCEEEEEeCCCChhhh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLA-QRGAIVTIVTTPVNAARF 50 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La-~rGh~VT~~t~~~~~~~~ 50 (363)
+++-.-|+.|=..-.+.++..++ ++|+.|-+++.+-....+
T Consensus 204 iviaarpg~GKT~~al~ia~~~a~~~g~~vl~fSlEms~~~l 245 (444)
T PRK05595 204 ILIAARPSMGKTTFALNIAEYAALREGKSVAIFSLEMSKEQL 245 (444)
T ss_pred EEEEecCCCChHHHHHHHHHHHHHHcCCcEEEEecCCCHHHH
Confidence 45567889999999999999887 569999999988665543
No 105
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=62.10 E-value=9.3 Score=31.02 Aligned_cols=22 Identities=36% Similarity=0.354 Sum_probs=17.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~~ 45 (363)
-..||+++..||++||+++.+.
T Consensus 32 G~~lA~~~~~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 32 GAALAEEAARRGAEVTLIHGPS 53 (185)
T ss_dssp HHHHHHHHHHTT-EEEEEE-TT
T ss_pred HHHHHHHHHHCCCEEEEEecCc
Confidence 4678999999999999999863
No 106
>PRK08760 replicative DNA helicase; Provisional
Probab=62.09 E-value=90 Score=29.73 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=33.2
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCCChhh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPVNAAR 49 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~~~~~ 49 (363)
+++..-|+.|=..-.+.+|...+.+ |+.|-|++.+-....
T Consensus 232 ivIaarPg~GKTafal~iA~~~a~~~g~~V~~fSlEMs~~q 272 (476)
T PRK08760 232 IILAARPAMGKTTFALNIAEYAAIKSKKGVAVFSMEMSASQ 272 (476)
T ss_pred EEEEeCCCCChhHHHHHHHHHHHHhcCCceEEEeccCCHHH
Confidence 5666789999999999999999854 999999998765544
No 107
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=62.04 E-value=1.4e+02 Score=27.82 Aligned_cols=42 Identities=24% Similarity=0.194 Sum_probs=35.7
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhH
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFK 51 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~ 51 (363)
-+++=--|+-|--.-+++++..||+|| .|-|++.+....+++
T Consensus 95 ~iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~Qik 136 (456)
T COG1066 95 VILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIK 136 (456)
T ss_pred EEEEccCCCCCHHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHH
Confidence 355566889999999999999999999 999999987766654
No 108
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=61.87 E-value=13 Score=33.22 Aligned_cols=29 Identities=24% Similarity=0.142 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
..|=-.-...++++|.++||+|++++...
T Consensus 14 ~gG~~~~~~~la~~L~~~g~~v~v~~~~~ 42 (363)
T cd04955 14 YGGFETFVEELAPRLVARGHEVTVYCRSP 42 (363)
T ss_pred cCcHHHHHHHHHHHHHhcCCCEEEEEccC
Confidence 34556677899999999999999998753
No 109
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=61.84 E-value=20 Score=28.39 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=24.6
Q ss_pred CCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 276 SQQPTSVVYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 276 ~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
.++.+-.+|+|+||+..-+.+.++.-...|++.+
T Consensus 3 ~~~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~~ 36 (163)
T PRK14092 3 GSPASALAYVGLGANLGDAAATLRSVLAELAAAP 36 (163)
T ss_pred CCCcCCEEEEEecCchHhHHHHHHHHHHHHHhCC
Confidence 3444557899999998656677777777776644
No 110
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=61.39 E-value=15 Score=31.61 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=37.1
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHH
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKT 52 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~ 52 (363)
...++++--||.|=.--..+++.+|..+|+.|+|++++.....++.
T Consensus 105 ~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~ 150 (254)
T COG1484 105 GENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKA 150 (254)
T ss_pred CCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHH
Confidence 3468889989888888889999999988999999998765554443
No 111
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=60.80 E-value=1.2e+02 Score=26.89 Aligned_cols=106 Identities=18% Similarity=0.206 Sum_probs=60.9
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCCChhHHHH
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLPTTDFARF 96 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (363)
-.-|+--+..+..+|.+|||+|-+.+-+... +.+..+. -++.+..+. ..+ ..+.. ..+
T Consensus 9 n~~hvhfFk~lI~elekkG~ev~iT~rd~~~--v~~LLd~-----ygf~~~~Ig--------k~g-----~~tl~--~Kl 66 (346)
T COG1817 9 NPPHVHFFKNLIWELEKKGHEVLITCRDFGV--VTELLDL-----YGFPYKSIG--------KHG-----GVTLK--EKL 66 (346)
T ss_pred CcchhhHHHHHHHHHHhCCeEEEEEEeecCc--HHHHHHH-----hCCCeEeec--------ccC-----CccHH--HHH
Confidence 3456677899999999999999865543211 1122110 134444432 011 00000 112
Q ss_pred HHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEeccc
Q 039413 97 LNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 97 ~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~ 148 (363)
...... .-.+.+++.+ .++|+.+. -....+..+|--+|+|.|+|.-..
T Consensus 67 ~~~~eR-~~~L~ki~~~--~kpdv~i~-~~s~~l~rvafgLg~psIi~~D~e 114 (346)
T COG1817 67 LESAER-VYKLSKIIAE--FKPDVAIG-KHSPELPRVAFGLGIPSIIFVDNE 114 (346)
T ss_pred HHHHHH-HHHHHHHHhh--cCCceEee-cCCcchhhHHhhcCCceEEecCCh
Confidence 111111 1234556655 68999988 667788899999999999986553
No 112
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=60.34 E-value=16 Score=32.65 Aligned_cols=30 Identities=27% Similarity=0.225 Sum_probs=26.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
.-|.-.-...++++|.++||+|+++++...
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 42 (357)
T cd03795 13 RGGIEQVIRDLAEGLAARGIEVAVLCASPE 42 (357)
T ss_pred CCcHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence 558889999999999999999999987643
No 113
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=60.00 E-value=10 Score=32.44 Aligned_cols=27 Identities=19% Similarity=0.145 Sum_probs=21.5
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 19 GHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 19 gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
|=-...-.|+++|+++||+|+++++..
T Consensus 17 GLgdv~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 17 GLGDVVGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred cHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence 455677899999999999999999854
No 114
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=59.59 E-value=9.6 Score=30.73 Aligned_cols=31 Identities=19% Similarity=0.218 Sum_probs=21.6
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+|.++. +.|+. -..+.++...|||+||-++-
T Consensus 2 KIaiIg--AsG~~--Gs~i~~EA~~RGHeVTAivR 32 (211)
T COG2910 2 KIAIIG--ASGKA--GSRILKEALKRGHEVTAIVR 32 (211)
T ss_pred eEEEEe--cCchh--HHHHHHHHHhCCCeeEEEEe
Confidence 344444 33433 34688999999999998874
No 115
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=57.77 E-value=22 Score=24.12 Aligned_cols=34 Identities=18% Similarity=0.080 Sum_probs=29.1
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEE
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIV 41 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~ 41 (363)
..++++......|..-+.++|+.|+++|..|..+
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~ 49 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAY 49 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 3577777778899999999999999999998755
No 116
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=57.46 E-value=21 Score=26.85 Aligned_cols=38 Identities=24% Similarity=0.124 Sum_probs=27.5
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
||++.-..+.+=+. ...+.++|.++|++|+++.++.-.
T Consensus 2 ~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~ 39 (129)
T PF02441_consen 2 RILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAE 39 (129)
T ss_dssp EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHH
T ss_pred EEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHH
Confidence 55555555544444 999999999999999999885433
No 117
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=57.42 E-value=32 Score=32.98 Aligned_cols=42 Identities=14% Similarity=0.228 Sum_probs=37.3
Q ss_pred CCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeCC
Q 039413 278 QPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGE 319 (363)
Q Consensus 278 ~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~~ 319 (363)
|++.|||+||+-...+.++-+.-=.+=|+..+-.++|-....
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~ 468 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGG 468 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 567899999999999999998888888999999999987764
No 118
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=57.04 E-value=20 Score=33.77 Aligned_cols=43 Identities=16% Similarity=0.264 Sum_probs=34.5
Q ss_pred CCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeCCc
Q 039413 278 QPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGES 320 (363)
Q Consensus 278 ~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~~~ 320 (363)
+++.|+|-||.+...++++.++..++-|++.|...||..+.+.
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~ 324 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPA 324 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETST
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCH
Confidence 4566999999999999999999999999999999999987653
No 119
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=56.92 E-value=41 Score=27.69 Aligned_cols=43 Identities=16% Similarity=0.042 Sum_probs=36.1
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAAR 49 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~ 49 (363)
+.++++.+.++-.|-+...-++..|.+.|++|+++-..-..+.
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~ 124 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEE 124 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 5689999999999999999999999999999988765433333
No 120
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=56.92 E-value=20 Score=31.43 Aligned_cols=32 Identities=25% Similarity=0.195 Sum_probs=27.5
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 15 FLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 15 ~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
++..|+...+..++++|.++||+|++++....
T Consensus 9 ~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~ 40 (353)
T cd03811 9 LGGGGAERVLLNLANGLDKRGYDVTLVVLRDE 40 (353)
T ss_pred ccCCCcchhHHHHHHHHHhcCceEEEEEcCCC
Confidence 33678999999999999999999999987543
No 121
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=54.57 E-value=1.2e+02 Score=26.06 Aligned_cols=22 Identities=18% Similarity=0.143 Sum_probs=18.3
Q ss_pred HHHHHHHHHhCCCEEEEEeCCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~~ 45 (363)
-..|+++|.++||+|+..+...
T Consensus 12 gr~la~~L~~~g~~v~~s~~t~ 33 (256)
T TIGR00715 12 SRAIAKGLIAQGIEILVTVTTS 33 (256)
T ss_pred HHHHHHHHHhCCCeEEEEEccC
Confidence 6789999999999999876543
No 122
>PRK09165 replicative DNA helicase; Provisional
Probab=54.41 E-value=1.6e+02 Score=28.28 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=33.1
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhC---------------CCEEEEEeCCCChhhh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQR---------------GAIVTIVTTPVNAARF 50 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~r---------------Gh~VT~~t~~~~~~~~ 50 (363)
+++..-|+.|=..-++.++...+.+ |..|.|++.+-....+
T Consensus 220 ivIaarpg~GKT~~al~ia~~~a~~~~~~~~~~~~~~~~~g~~vl~fSlEMs~~ql 275 (497)
T PRK09165 220 IILAGRPSMGKTALATNIAFNAAKAYRREAQPDGSKKAVNGGVVGFFSLEMSAEQL 275 (497)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhhcccccccccccccCCCeEEEEeCcCCHHHH
Confidence 5666788999999999999988854 7889999988665543
No 123
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=54.38 E-value=1.2e+02 Score=27.45 Aligned_cols=33 Identities=27% Similarity=0.311 Sum_probs=25.2
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCC-EEEEEeCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGA-IVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh-~VT~~t~~ 44 (363)
..+|+++-..+-| ..+++.|+..|+ ++|++-.+
T Consensus 24 ~~~VlIiG~GglG-----s~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 24 EKHVLIVGAGALG-----AANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred CCcEEEECCCHHH-----HHHHHHHHHcCCCEEEEEcCC
Confidence 4578888766544 788999999998 78887553
No 124
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=54.37 E-value=48 Score=27.20 Aligned_cols=45 Identities=13% Similarity=-0.087 Sum_probs=37.8
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhh
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARF 50 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~ 50 (363)
.+.++++.+.++--|-+...-++..|-.+|++|+++-..-..+.+
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~ 127 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTV 127 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHH
Confidence 356899999999999999999999999999999998765444433
No 125
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=54.03 E-value=14 Score=30.32 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 20 HMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 20 H~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
+---+..|.++|.+.||+|+++.+....+
T Consensus 12 ~a~Gi~aL~~~L~~~g~~V~VvAP~~~~S 40 (196)
T PF01975_consen 12 DAPGIRALAKALSALGHDVVVVAPDSEQS 40 (196)
T ss_dssp TSHHHHHHHHHHTTTSSEEEEEEESSSTT
T ss_pred CCHHHHHHHHHHHhcCCeEEEEeCCCCCc
Confidence 33457889999977789999999876654
No 126
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=51.32 E-value=40 Score=25.08 Aligned_cols=39 Identities=21% Similarity=0.027 Sum_probs=34.0
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
|+++...++-.|-.-..-++..|...|++|+++-.....
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G~~vi~lG~~vp~ 39 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAGFEVIYTGLRQTP 39 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 578899999999999999999999999999998765433
No 127
>PRK14099 glycogen synthase; Provisional
Probab=51.25 E-value=28 Score=33.17 Aligned_cols=40 Identities=13% Similarity=-0.027 Sum_probs=31.6
Q ss_pred CCceEEEEcCC------CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 6 SQSHFLLLPFL------APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 6 ~~~~lv~~p~p------~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
++++|+++..- .-|=-..+-.|.++|+++||+|.++++..
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y 47 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGY 47 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45677777532 34777889999999999999999999854
No 128
>PRK06321 replicative DNA helicase; Provisional
Probab=50.67 E-value=2.3e+02 Score=27.00 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=33.3
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHh-CCCEEEEEeCCCChhhh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQ-RGAIVTIVTTPVNAARF 50 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~-rGh~VT~~t~~~~~~~~ 50 (363)
+++-.-|+.|=..-.+.++...+. .|..|-|++.+-....+
T Consensus 229 iiiaarPgmGKTafal~ia~~~a~~~g~~v~~fSLEMs~~ql 270 (472)
T PRK06321 229 MILAARPAMGKTALALNIAENFCFQNRLPVGIFSLEMTVDQL 270 (472)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHhcCCeEEEEeccCCHHHH
Confidence 556678999999999999999985 58999999987665443
No 129
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=50.39 E-value=2e+02 Score=26.33 Aligned_cols=41 Identities=22% Similarity=0.207 Sum_probs=33.7
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARF 50 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~ 50 (363)
+++.--|+.|=-.-+++++..++.+|..|-+++.+....++
T Consensus 85 vLI~G~pG~GKStLllq~a~~~a~~g~~VlYvs~EEs~~qi 125 (372)
T cd01121 85 ILIGGDPGIGKSTLLLQVAARLAKRGGKVLYVSGEESPEQI 125 (372)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEECCcCHHHH
Confidence 55666788999999999999999999999999987654443
No 130
>PLN02316 synthase/transferase
Probab=49.46 E-value=40 Score=35.27 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=31.2
Q ss_pred CCceEEEEcC---C---CCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 6 SQSHFLLLPF---L---APGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 6 ~~~~lv~~p~---p---~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
..+||+++.. | .-|=-.....|+++|+++||+|.++++...
T Consensus 586 ~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~ 632 (1036)
T PLN02316 586 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYD 632 (1036)
T ss_pred CCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 4578887762 2 235556678999999999999999998643
No 131
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=48.76 E-value=16 Score=27.56 Aligned_cols=27 Identities=26% Similarity=0.161 Sum_probs=19.9
Q ss_pred EEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 283 VYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 283 IyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
+|+|+||+..-+.+.++.-...|++.+
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~ 27 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALP 27 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCC
Confidence 599999998656666776667776554
No 132
>PRK07773 replicative DNA helicase; Validated
Probab=48.49 E-value=2.2e+02 Score=29.76 Aligned_cols=41 Identities=20% Similarity=0.159 Sum_probs=33.8
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCCChhhh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPVNAARF 50 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~~~~~~ 50 (363)
+++..-|+.|=..-.+.++...+.+ |..|.|++.+.....+
T Consensus 220 ivIagrPg~GKT~fal~ia~~~a~~~~~~V~~fSlEms~~ql 261 (886)
T PRK07773 220 IIVAARPSMGKTTFGLDFARNCAIRHRLAVAIFSLEMSKEQL 261 (886)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHhcCCeEEEEecCCCHHHH
Confidence 5666788999999999999999865 8899999987665543
No 133
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=48.02 E-value=25 Score=23.01 Aligned_cols=20 Identities=30% Similarity=0.298 Sum_probs=16.5
Q ss_pred HHHHHHHHHhCCCEEEEEeC
Q 039413 24 MFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~ 43 (363)
-+..|..|+++|++||++=.
T Consensus 8 Gl~aA~~L~~~g~~v~v~E~ 27 (68)
T PF13450_consen 8 GLAAAYYLAKAGYRVTVFEK 27 (68)
T ss_dssp HHHHHHHHHHTTSEEEEEES
T ss_pred HHHHHHHHHHCCCcEEEEec
Confidence 35678899999999999854
No 134
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=47.49 E-value=1.1e+02 Score=22.18 Aligned_cols=83 Identities=16% Similarity=0.082 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCCChhHHHHHH
Q 039413 19 GHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLPTTDFARFLN 98 (363)
Q Consensus 19 gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (363)
++-.-+..+++.|.+.|+++. +++.....+... ++.+..+.. ...
T Consensus 10 ~~k~~~~~~~~~l~~~G~~l~--aT~gT~~~l~~~---------gi~~~~v~~------~~~------------------ 54 (110)
T cd01424 10 RDKPEAVEIAKRLAELGFKLV--ATEGTAKYLQEA---------GIPVEVVNK------VSE------------------ 54 (110)
T ss_pred CcHhHHHHHHHHHHHCCCEEE--EchHHHHHHHHc---------CCeEEEEee------cCC------------------
Confidence 455678899999999999884 454544444331 344443321 010
Q ss_pred HHHhchHHHHHHHHhCCCCCcEEEecCCC-------ccHHHHHHHcCCCcE
Q 039413 99 SLHMLQLPFENLFERQTLKPCCIISDMCF-------PWTVDTAAKFNVPRI 142 (363)
Q Consensus 99 ~~~~~~~~~~~ll~~~~~~~d~vI~D~~~-------~~~~~vA~~~~iP~v 142 (363)
-.+.+.+++++ .++|+||.-.-- .+....|-.+|+|++
T Consensus 55 ----~~~~i~~~i~~--~~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~ 99 (110)
T cd01424 55 ----GRPNIVDLIKN--GEIQLVINTPSGKRAIRDGFSIRRAALEYKVPYF 99 (110)
T ss_pred ----CchhHHHHHHc--CCeEEEEECCCCCccCccHHHHHHHHHHhCCCEE
Confidence 01234445555 689999974321 244578889999987
No 135
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=46.69 E-value=37 Score=32.99 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=39.6
Q ss_pred CCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeCCcc
Q 039413 278 QPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGESK 321 (363)
Q Consensus 278 ~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~~~~ 321 (363)
+++-|||-+|--...++++.++.-++-|++-+..+||..|.+-.
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ 799 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV 799 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEecccc
Confidence 45669999999999999999999999999999999999998743
No 136
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=46.65 E-value=74 Score=26.50 Aligned_cols=44 Identities=18% Similarity=0.098 Sum_probs=37.4
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAAR 49 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~ 49 (363)
++.++++...++-.|-+...-++..|..+|++|+++-..-..+.
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 130 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEK 130 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHH
Confidence 45689999999999999999999999999999999876544443
No 137
>PRK05636 replicative DNA helicase; Provisional
Probab=46.59 E-value=2.3e+02 Score=27.34 Aligned_cols=40 Identities=10% Similarity=0.091 Sum_probs=32.0
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHh-CCCEEEEEeCCCChhh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQ-RGAIVTIVTTPVNAAR 49 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~-rGh~VT~~t~~~~~~~ 49 (363)
+++..-|+.|=..-.+.++...+. .|..|.|++.+-....
T Consensus 268 iiiaarpg~GKT~~al~~a~~~a~~~g~~v~~fSlEMs~~q 308 (505)
T PRK05636 268 IIVAARPGVGKSTLALDFMRSASIKHNKASVIFSLEMSKSE 308 (505)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEEeeCCHHH
Confidence 566778899999999999988874 5889999988765544
No 138
>TIGR03878 thermo_KaiC_2 KaiC domain protein, AF_0795 family. This KaiC domain-containing protein family occurs sporadically across a broad taxonomic range (Euryarchaeota, Aquificae, Dictyoglomi, Epsilonproteobacteria, and Firmicutes), but exclusively in thermophiles.
Probab=46.26 E-value=1.2e+02 Score=26.20 Aligned_cols=38 Identities=21% Similarity=0.102 Sum_probs=33.2
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
-+++.--|+.|=..-.++++.+.+.+|..|.|++++..
T Consensus 38 ~~lI~G~pGtGKT~l~~qf~~~~a~~Ge~vlyis~Ee~ 75 (259)
T TIGR03878 38 VINITGVSDTGKSLMVEQFAVTQASRGNPVLFVTVESP 75 (259)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHhCCCcEEEEEecCC
Confidence 46677788999999999999999999999999998743
No 139
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=46.19 E-value=57 Score=28.71 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=34.0
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
..|.+--.|+-|--.-.-.|.++|.+|||+|-++.-++.
T Consensus 52 ~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPS 90 (323)
T COG1703 52 HVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPS 90 (323)
T ss_pred cEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCC
Confidence 357788899999999999999999999999999986554
No 140
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=45.62 E-value=1.6e+02 Score=24.18 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=29.0
Q ss_pred eEEEEcCC-CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPFL-APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p-~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.|-++..| .-|-..-+++-++....+|-+|.++++.
T Consensus 5 ~l~~i~gpM~SGKT~eLl~r~~~~~~~g~~v~vfkp~ 41 (201)
T COG1435 5 WLEFIYGPMFSGKTEELLRRARRYKEAGMKVLVFKPA 41 (201)
T ss_pred EEEEEEccCcCcchHHHHHHHHHHHHcCCeEEEEecc
Confidence 45555545 4688889999999999999999999875
No 141
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=44.62 E-value=28 Score=28.58 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=26.8
Q ss_pred eEEEEcCCCCCCHHH-HHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLPFLAPGHMIP-MFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p-~l~La~~La~rGh~VT~~t~~~ 45 (363)
+|++ ...+-+...- ...++++|.++||+|+++.|+.
T Consensus 7 ~Ill-gVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~a 43 (196)
T PRK08305 7 RIGF-GLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYT 43 (196)
T ss_pred EEEE-EEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHh
Confidence 5443 3345555555 6899999999999999998864
No 142
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=44.52 E-value=2.1e+02 Score=25.86 Aligned_cols=30 Identities=10% Similarity=-0.020 Sum_probs=24.4
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 16 LAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 16 p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.+-|=-.-...+++.|.+.||+|++++...
T Consensus 10 ~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~ 39 (372)
T cd03792 10 YGGGVAEILHSLVPLMRDLGVDTRWEVIKG 39 (372)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCceEEecCC
Confidence 445667778899999999999999998643
No 143
>PRK09620 hypothetical protein; Provisional
Probab=44.40 E-value=26 Score=29.58 Aligned_cols=21 Identities=24% Similarity=0.021 Sum_probs=18.2
Q ss_pred HHHHHHHHHhCCCEEEEEeCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~ 44 (363)
-.+||++|.+||++||++...
T Consensus 32 Gs~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 32 GRIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred HHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999754
No 144
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=44.07 E-value=50 Score=25.92 Aligned_cols=27 Identities=19% Similarity=0.057 Sum_probs=23.7
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCEEEEE
Q 039413 15 FLAPGHMIPMFDTARLLAQRGAIVTIV 41 (363)
Q Consensus 15 ~p~~gH~~p~l~La~~La~rGh~VT~~ 41 (363)
-++-|-....+.|++.|+++|.+|-++
T Consensus 6 ~~~~GKT~va~~L~~~l~~~g~~V~~~ 32 (166)
T TIGR00347 6 DTGVGKTVASSALAAKLKKAGYSVGYY 32 (166)
T ss_pred CCCccHHHHHHHHHHHHHHCCCcEEEE
Confidence 456788889999999999999999886
No 145
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=43.83 E-value=45 Score=25.07 Aligned_cols=38 Identities=11% Similarity=0.208 Sum_probs=29.5
Q ss_pred cEEEEecCCCcCCChhHHHHHHHHHhh-CC-CCeEEEEeC
Q 039413 281 SVVYVCLGSICNLPSSQLIELGLGLEA-SN-KPFVWVIRG 318 (363)
Q Consensus 281 sVIyvsfGS~~~l~~~~~~~~~~~l~~-~~-~~flW~~~~ 318 (363)
+++.++|||...-..+.++.+++.+++ .+ .+|-|.+-+
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~afts 41 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFTS 41 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEecH
Confidence 589999999887556678888888854 34 478898864
No 146
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=43.72 E-value=41 Score=22.60 Aligned_cols=22 Identities=27% Similarity=0.292 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhCCCEEEEEeCC
Q 039413 23 PMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~~ 44 (363)
.-+.+|..|+++|.+||++...
T Consensus 10 ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 10 IGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp HHHHHHHHHHHTTSEEEEEESS
T ss_pred HHHHHHHHHHHhCcEEEEEecc
Confidence 4578999999999999999864
No 147
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=43.35 E-value=47 Score=28.95 Aligned_cols=44 Identities=18% Similarity=0.213 Sum_probs=33.2
Q ss_pred chHHHHHHHHhCCCCCcEEEecCCCc-----cHHHHHHHcCCCcEEEecc
Q 039413 103 LQLPFENLFERQTLKPCCIISDMCFP-----WTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 103 ~~~~~~~ll~~~~~~~d~vI~D~~~~-----~~~~vA~~~~iP~v~~~~~ 147 (363)
+.+.++++|++ ..+.-+||.|.|.- ...+.|.+.++|++++.-.
T Consensus 135 IKE~vR~~I~~-A~kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLLD~ 183 (284)
T PF07894_consen 135 IKEVVRRMIQQ-AQKVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILLDE 183 (284)
T ss_pred HHHHHHHHHHH-hcceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEech
Confidence 45677777776 36789999998864 3457788999999887544
No 148
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=42.74 E-value=16 Score=17.65 Aligned_cols=18 Identities=22% Similarity=0.846 Sum_probs=14.0
Q ss_pred hhhccccCCCCCCcEEEE
Q 039413 268 PECLTWLDSQQPTSVVYV 285 (363)
Q Consensus 268 ~~~~~wLd~~~~~sVIyv 285 (363)
-.|.+|.++.++.-.+|.
T Consensus 3 ikCiNWFE~~ge~r~lyL 20 (22)
T PF08452_consen 3 IKCINWFESRGEERFLYL 20 (22)
T ss_pred cEEeehhhhCCceeEEEE
Confidence 358999999887767774
No 149
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=42.64 E-value=27 Score=30.74 Aligned_cols=19 Identities=37% Similarity=0.356 Sum_probs=16.8
Q ss_pred HHHHHHHHHhCCCEEEEEe
Q 039413 24 MFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t 42 (363)
-..+|++||+||.+|.+++
T Consensus 62 GKayA~eLAkrG~nvvLIs 80 (312)
T KOG1014|consen 62 GKAYARELAKRGFNVVLIS 80 (312)
T ss_pred hHHHHHHHHHcCCEEEEEe
Confidence 3689999999999988886
No 150
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=42.37 E-value=45 Score=27.09 Aligned_cols=23 Identities=22% Similarity=0.122 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCC
Q 039413 23 PMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~~~ 45 (363)
-...|+..|+++||+|||.....
T Consensus 22 ~ve~L~~~l~~~g~~v~Vyc~~~ 44 (185)
T PF09314_consen 22 FVEELAPRLVSKGIDVTVYCRSD 44 (185)
T ss_pred HHHHHHHHHhcCCceEEEEEccC
Confidence 34455666667899999987643
No 151
>PRK14098 glycogen synthase; Provisional
Probab=42.05 E-value=51 Score=31.48 Aligned_cols=38 Identities=13% Similarity=-0.008 Sum_probs=30.6
Q ss_pred ceEEEEcCC------CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 8 SHFLLLPFL------APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 8 ~~lv~~p~p------~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
++|+++..- .-|=-..+-.|.++|+++||+|.++++..
T Consensus 6 ~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y 49 (489)
T PRK14098 6 FKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKY 49 (489)
T ss_pred cEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 677777632 34777889999999999999999999854
No 152
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=41.53 E-value=29 Score=29.31 Aligned_cols=30 Identities=27% Similarity=0.121 Sum_probs=21.4
Q ss_pred EEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 12 LLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 12 ~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
++...+.|- .-.+|+++|+++|++||++..
T Consensus 19 ~itN~SSG~--iG~aLA~~L~~~G~~V~li~r 48 (229)
T PRK06732 19 GITNHSTGQ--LGKIIAETFLAAGHEVTLVTT 48 (229)
T ss_pred eecCccchH--HHHHHHHHHHhCCCEEEEEEC
Confidence 334444442 346889999999999999874
No 153
>PRK10239 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase; Provisional
Probab=41.40 E-value=29 Score=27.41 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=21.1
Q ss_pred EEEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 282 VVYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 282 VIyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
.+|+++||+..-+.+.++.-...|++.+
T Consensus 3 ~v~i~lGSN~g~~~~~l~~A~~~L~~~~ 30 (159)
T PRK10239 3 VAYIAIGSNLASPLEQVNAALKALGDIP 30 (159)
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998656666777777776653
No 154
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=41.32 E-value=71 Score=26.96 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=30.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 039413 16 LAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAAR 49 (363)
Q Consensus 16 p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~ 49 (363)
.|-|=..-.+.||.+|++||-.|+++-++++.+.
T Consensus 11 GGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~pl 44 (231)
T PF07015_consen 11 GGAGKTTAAMALASELAARGARVALIDADPNQPL 44 (231)
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCcH
Confidence 3678999999999999999999999999877653
No 155
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=41.23 E-value=3.6e+02 Score=26.59 Aligned_cols=36 Identities=17% Similarity=0.163 Sum_probs=23.4
Q ss_pred CCCcEEE-ecCC-Cc-cHHHHHHHcCC--CcEEEecccHHH
Q 039413 116 LKPCCII-SDMC-FP-WTVDTAAKFNV--PRIIFHEFSCFC 151 (363)
Q Consensus 116 ~~~d~vI-~D~~-~~-~~~~vA~~~~i--P~v~~~~~~~~~ 151 (363)
.+||++| .|.- +. ....-+++.|+ |+|.+.+-..++
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWA 349 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWA 349 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECcccee
Confidence 5799888 6852 22 34556678886 988776555544
No 156
>cd01421 IMPCH Inosine monophosphate cyclohydrolase domain. This is the N-terminal domain in the purine biosynthesis pathway protein ATIC (purH). The bifunctional ATIC protein contains a C-terminal ATIC formylase domain that formylates 5-aminoimidazole-4-carboxamide-ribonucleotide. The IMPCH domain then converts the formyl-5-aminoimidazole-4-carboxamide-ribonucleotide to inosine monophosphate. This is the final step in de novo purine production.
Probab=40.93 E-value=1.3e+02 Score=24.42 Aligned_cols=29 Identities=21% Similarity=0.190 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCCChhhhHH
Q 039413 22 IPMFDTARLLAQRGAIVTIVTTPVNAARFKT 52 (363)
Q Consensus 22 ~p~l~La~~La~rGh~VT~~t~~~~~~~~~~ 52 (363)
.-+..+++.|.+.|+++. +|....+.++.
T Consensus 11 ~~l~~lAk~L~~lGf~I~--AT~GTAk~L~e 39 (187)
T cd01421 11 TGLVEFAKELVELGVEIL--STGGTAKFLKE 39 (187)
T ss_pred ccHHHHHHHHHHCCCEEE--EccHHHHHHHH
Confidence 346789999999999984 55555554443
No 157
>PRK09841 cryptic autophosphorylating protein tyrosine kinase Etk; Provisional
Probab=40.86 E-value=3e+02 Score=27.93 Aligned_cols=41 Identities=15% Similarity=0.222 Sum_probs=32.1
Q ss_pred CceEEEEc--CCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 7 QSHFLLLP--FLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 7 ~~~lv~~p--~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
..+++++. .|+.|=......||..|+..|.+|-++-.+...
T Consensus 530 ~~kvI~vtS~~~g~GKTtva~nLA~~la~~G~rVLlID~D~r~ 572 (726)
T PRK09841 530 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRR 572 (726)
T ss_pred CCeEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 44566665 456788899999999999999999999776443
No 158
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=40.57 E-value=76 Score=25.31 Aligned_cols=87 Identities=11% Similarity=0.074 Sum_probs=49.2
Q ss_pred CceEEecCccccchhHHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcC
Q 039413 213 TYGTIINTFEELESPCIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICN 292 (363)
Q Consensus 213 ~~~~l~nt~~~le~~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~ 292 (363)
....++-+-++.-..+.+.++..+ |++.-+|-.+..-.. .+..++.+.+.+..++ +|+|++|+--
T Consensus 47 ~~v~llG~~~~~~~~~~~~l~~~y-p~l~i~g~~~g~~~~------------~~~~~i~~~I~~~~pd-iv~vglG~Pk- 111 (171)
T cd06533 47 LRVFLLGAKPEVLEKAAERLRARY-PGLKIVGYHHGYFGP------------EEEEEIIERINASGAD-ILFVGLGAPK- 111 (171)
T ss_pred CeEEEECCCHHHHHHHHHHHHHHC-CCcEEEEecCCCCCh------------hhHHHHHHHHHHcCCC-EEEEECCCCH-
Confidence 445555555444444555667666 677777744332111 1235588888888777 9999999743
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEeC
Q 039413 293 LPSSQLIELGLGLEASNKPFVWVIRG 318 (363)
Q Consensus 293 l~~~~~~~~~~~l~~~~~~flW~~~~ 318 (363)
|-.=+.+-...++..++--+..
T Consensus 112 ----QE~~~~~~~~~l~~~v~~~vG~ 133 (171)
T cd06533 112 ----QELWIARHKDRLPVPVAIGVGG 133 (171)
T ss_pred ----HHHHHHHHHHHCCCCEEEEece
Confidence 1112222233345666666554
No 159
>cd00483 HPPK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is HPPK which catalyzes pyrophosphoryl transfer from ATP to 6-hydroxymethyl-7,8-dihydropterin (HP). The functional enzyme is a monomer. Mammals lack many of the enzymes in the folate pathway including, HPPK.
Probab=40.56 E-value=28 Score=26.32 Aligned_cols=27 Identities=30% Similarity=0.186 Sum_probs=20.3
Q ss_pred EEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 283 VYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 283 IyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
+|+|+||+..-+.+.++.-...|++..
T Consensus 1 ~~i~LGSN~~~~~~~l~~A~~~L~~~~ 27 (128)
T cd00483 1 VYLALGSNLGDRLANLRAALRALAALP 27 (128)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHHcCC
Confidence 599999998756666777777776654
No 160
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=40.08 E-value=59 Score=25.06 Aligned_cols=39 Identities=23% Similarity=0.099 Sum_probs=34.9
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.++++++.+...-||-.-..-+++.|++-|++|......
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~ 49 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLF 49 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHHHhCCceEEecCCc
Confidence 578999999999999999999999999999999876543
No 161
>PRK11519 tyrosine kinase; Provisional
Probab=39.95 E-value=97 Score=31.34 Aligned_cols=40 Identities=15% Similarity=0.233 Sum_probs=32.4
Q ss_pred CceEEEEc--CCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 7 QSHFLLLP--FLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 7 ~~~lv~~p--~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
+.+++++. .|+.|=......||..|+++|++|-++-.+..
T Consensus 525 ~~kvi~vts~~~geGKTt~a~nLA~~la~~g~rvLlID~Dlr 566 (719)
T PRK11519 525 QNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMR 566 (719)
T ss_pred CceEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 44566655 56789999999999999999999999977644
No 162
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=39.25 E-value=58 Score=28.89 Aligned_cols=26 Identities=15% Similarity=0.060 Sum_probs=21.7
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 20 HMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 20 H~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
--.-+..+++.|.++||+|++++...
T Consensus 13 ~~~~~~~~~~~L~~~g~~v~v~~~~~ 38 (355)
T cd03799 13 SETFILREILALEAAGHEVEIFSLRP 38 (355)
T ss_pred chHHHHHHHHHHHhCCCeEEEEEecC
Confidence 44567889999999999999998743
No 163
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=38.93 E-value=50 Score=27.32 Aligned_cols=42 Identities=17% Similarity=0.139 Sum_probs=23.9
Q ss_pred HHHHHHHHhCCCCCcEEEecCCCc-----c--HHHHHHHcCCCcEEEec
Q 039413 105 LPFENLFERQTLKPCCIISDMCFP-----W--TVDTAAKFNVPRIIFHE 146 (363)
Q Consensus 105 ~~~~~ll~~~~~~~d~vI~D~~~~-----~--~~~vA~~~~iP~v~~~~ 146 (363)
+.+.++++.+..++|+|++|-... + +.-++-.+++|.|++.=
T Consensus 77 P~~l~~l~~l~~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGVAK 125 (206)
T PF04493_consen 77 PCILEALEKLKNKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGVAK 125 (206)
T ss_dssp HHHHHHHHTSSS--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEEES
T ss_pred HHHHHHHHHhcccCCEEEEeCceeecCCCcChhheeeeccCCCEEEEeC
Confidence 455556666666799999997653 1 22344556788888753
No 164
>PLN02939 transferase, transferring glycosyl groups
Probab=38.93 E-value=69 Score=33.22 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=32.1
Q ss_pred CCceEEEEcC-----C-CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 6 SQSHFLLLPF-----L-APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 6 ~~~~lv~~p~-----p-~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.++||+++.. . .-|=-...-.|.++|+++||+|.++++.+
T Consensus 480 ~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y 525 (977)
T PLN02939 480 SGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKY 525 (977)
T ss_pred CCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 5678888763 2 34666788899999999999999999854
No 165
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=38.53 E-value=71 Score=27.14 Aligned_cols=45 Identities=18% Similarity=0.166 Sum_probs=29.0
Q ss_pred hHHHHHHHHhC------CCCCcEEE-ecCCC-ccHHHHHHHcCCCcEEEeccc
Q 039413 104 QLPFENLFERQ------TLKPCCII-SDMCF-PWTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 104 ~~~~~~ll~~~------~~~~d~vI-~D~~~-~~~~~vA~~~~iP~v~~~~~~ 148 (363)
....++|.+.+ ..-||+++ +|+-. .-+..-|.++|||+|.+.-+.
T Consensus 137 ~re~~kL~k~lgGIk~m~~~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn 189 (252)
T COG0052 137 TRELEKLEKSLGGIKDMKGLPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTN 189 (252)
T ss_pred HHHHHHHHHhhcchhhccCCCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCC
Confidence 34455554433 23488665 77654 345677889999999987554
No 166
>PLN00016 RNA-binding protein; Provisional
Probab=37.88 E-value=47 Score=30.36 Aligned_cols=38 Identities=26% Similarity=0.299 Sum_probs=26.2
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+.+|+|+..-+-|+=.--..|+++|+++||+|+.++-.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 34677773223333344578899999999999998753
No 167
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=37.46 E-value=45 Score=27.13 Aligned_cols=37 Identities=14% Similarity=0.027 Sum_probs=25.5
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
+|++--..+.|=+.-...+.++|.++|++|+++.++.
T Consensus 2 ~I~lgITGs~~a~~a~~~ll~~L~~~g~~V~vI~S~~ 38 (187)
T TIGR02852 2 RIGFGLTGSHCTLEAVMPQLEKLVDEGAEVTPIVSET 38 (187)
T ss_pred EEEEEEecHHHHHHHHHHHHHHHHhCcCEEEEEEchh
Confidence 3444433444444444699999999999999988754
No 168
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=37.24 E-value=39 Score=26.90 Aligned_cols=21 Identities=29% Similarity=0.230 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCCEEEEEeCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~ 44 (363)
-..++++|.++||+|+.++-.
T Consensus 11 G~~l~~~L~~~~~~V~~~~R~ 31 (183)
T PF13460_consen 11 GRALAKQLLRRGHEVTALVRS 31 (183)
T ss_dssp HHHHHHHHHHTTSEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEecC
Confidence 457999999999999999854
No 169
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=37.19 E-value=1.9e+02 Score=23.39 Aligned_cols=39 Identities=10% Similarity=0.106 Sum_probs=27.4
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCCh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNA 47 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~ 47 (363)
.++-+-..+-|=++...+|+++|.++ |++|.+-|+....
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg 62 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTG 62 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCH
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCch
Confidence 56667777889999999999999987 8888776654443
No 170
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=37.17 E-value=94 Score=24.79 Aligned_cols=64 Identities=14% Similarity=0.186 Sum_probs=42.5
Q ss_pred CceEEecCccccchhHHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCC
Q 039413 213 TYGTIINTFEELESPCIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSI 290 (363)
Q Consensus 213 ~~~~l~nt~~~le~~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~ 290 (363)
....++-+-++.-..+...++..+ |++.-+|=.+..-.. .+.+++.+.+.++.++ +|.+++|+-
T Consensus 49 ~~ifllG~~~~~~~~~~~~l~~~y-P~l~ivg~~~g~f~~------------~~~~~i~~~I~~~~pd-iv~vglG~P 112 (172)
T PF03808_consen 49 KRIFLLGGSEEVLEKAAANLRRRY-PGLRIVGYHHGYFDE------------EEEEAIINRINASGPD-IVFVGLGAP 112 (172)
T ss_pred CeEEEEeCCHHHHHHHHHHHHHHC-CCeEEEEecCCCCCh------------hhHHHHHHHHHHcCCC-EEEEECCCC
Confidence 455666666655555666777777 677777754432111 1457788889888776 999999974
No 171
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=36.34 E-value=83 Score=28.31 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=27.6
Q ss_pred hHHHHHHHHhCCCCCcEEEecCCCc-------cH---HHHHHHcCCCcEEE
Q 039413 104 QLPFENLFERQTLKPCCIISDMCFP-------WT---VDTAAKFNVPRIIF 144 (363)
Q Consensus 104 ~~~~~~ll~~~~~~~d~vI~D~~~~-------~~---~~vA~~~~iP~v~~ 144 (363)
...+.++++. .++|++|+-+.|. |+ ..+.++++||.|.-
T Consensus 69 ~~~i~~mv~~--~~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vta 117 (349)
T PF07355_consen 69 LKKILEMVKK--LKPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTA 117 (349)
T ss_pred HHHHHHHHHh--cCCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEE
Confidence 3445555665 6899999998775 22 25677999998764
No 172
>COG0467 RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms]
Probab=36.22 E-value=93 Score=26.67 Aligned_cols=45 Identities=20% Similarity=0.080 Sum_probs=38.6
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhH
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFK 51 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~ 51 (363)
..-+++.-.|+.|..+-.++++.+.+++|..|-++|+......+.
T Consensus 23 g~~~lI~G~pGsGKT~f~~qfl~~~~~~ge~vlyvs~~e~~~~l~ 67 (260)
T COG0467 23 GSVVLITGPPGTGKTIFALQFLYEGAREGEPVLYVSTEESPEELL 67 (260)
T ss_pred CcEEEEEcCCCCcHHHHHHHHHHHHHhcCCcEEEEEecCCHHHHH
Confidence 345788889999999999999999999999999999976655443
No 173
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=35.79 E-value=44 Score=29.75 Aligned_cols=31 Identities=13% Similarity=0.034 Sum_probs=26.6
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 16 LAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 16 p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
..-|.-.-+..++++|.++||+||+++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~ 40 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSKIQFDFLVTSKE 40 (358)
T ss_pred CCccHHHHHHHHHHhcCccceEEEEEEeCCC
Confidence 4568888999999999999999999987543
No 174
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=35.73 E-value=46 Score=27.60 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=25.0
Q ss_pred HHHHHHhCCCCCcEEEecCCCcc---HHHHHHH----cCCCcEEEe
Q 039413 107 FENLFERQTLKPCCIISDMCFPW---TVDTAAK----FNVPRIIFH 145 (363)
Q Consensus 107 ~~~ll~~~~~~~d~vI~D~~~~~---~~~vA~~----~~iP~v~~~ 145 (363)
+.++++++...||+|+.|-.... ..++|.+ +|+|.|++.
T Consensus 83 l~~~~~~l~~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGVA 128 (208)
T cd06559 83 LLEALEKLKTKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGVA 128 (208)
T ss_pred HHHHHHhCCCCCCEEEEeCCccccCCCcchhheeeeecCCCEEEEE
Confidence 55555555457999999976532 2455554 457777764
No 175
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=35.67 E-value=60 Score=28.78 Aligned_cols=28 Identities=25% Similarity=0.230 Sum_probs=24.1
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.|--.-...|+++|+++||+|++++...
T Consensus 13 gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 40 (366)
T cd03822 13 CGIATFTTDLVNALSARGPDVLVVSVAA 40 (366)
T ss_pred CcHHHHHHHHHHHhhhcCCeEEEEEeec
Confidence 5777889999999999999999998643
No 176
>PF01288 HPPK: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); InterPro: IPR000550 All organisms require reduced folate cofactors for the synthesis of a variety of metabolites. Most microorganisms must synthesise folate de novo because they lack the active transport system of higher vertebrate cells which allows these organisms to use dietary folates. Enzymes involved in folate biosynthesis are therefore targets for a variety of antimicrobial agents such as trimethoprim or sulphonamides. 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (2.7.6.3 from EC) (HPPK) catalyses the attachment of pyrophosphate to 6-hydroxymethyl-7,8-dihydropterin to form 6-hydroxymethyl-7,8-dihydropteridine pyrophosphate. This is the first step in a three-step pathway leading to 7,8 dihydrofolate. Bacterial HPPK (gene folK or sulD) [] is a protein of 160 to 270 amino acids. In the lower eukaryote Pneumocystis carinii, HPPK is the central domain of a multifunctional folate synthesis enzyme (gene fas) [].; GO: 0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity, 0009396 folic acid-containing compound biosynthetic process; PDB: 2QX0_B 1RU1_B 2F65_A 1RU2_A 1EQ0_A 3ILJ_A 3HSJ_A 3HD1_A 1TMM_B 1RB0_A ....
Probab=35.66 E-value=43 Score=25.25 Aligned_cols=26 Identities=27% Similarity=0.211 Sum_probs=21.7
Q ss_pred EEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 284 YVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 284 yvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
|+|+||+..-+.+.++.-...|++.+
T Consensus 1 ~i~LGSN~~~~~~~l~~A~~~L~~~~ 26 (127)
T PF01288_consen 1 YISLGSNLGDREQNLRQALQALSALP 26 (127)
T ss_dssp EEEEEESSSSHHHHHHHHHHHHHCST
T ss_pred CEEEeCchHhHHHHHHHHHHHHhcCC
Confidence 89999997667788888888888873
No 177
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=35.54 E-value=40 Score=29.11 Aligned_cols=39 Identities=21% Similarity=0.250 Sum_probs=26.9
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHH
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKT 52 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~ 52 (363)
.-++++-.+.| --..+|++||+|||+|.++. ...+++..
T Consensus 7 ~~~lITGASsG---IG~~~A~~lA~~g~~liLva--R~~~kL~~ 45 (265)
T COG0300 7 KTALITGASSG---IGAELAKQLARRGYNLILVA--RREDKLEA 45 (265)
T ss_pred cEEEEECCCch---HHHHHHHHHHHCCCEEEEEe--CcHHHHHH
Confidence 34555555554 35789999999999999886 44444443
No 178
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=35.48 E-value=43 Score=24.68 Aligned_cols=20 Identities=35% Similarity=0.421 Sum_probs=16.9
Q ss_pred HHHHHHHHHhCCCEEEEEeC
Q 039413 24 MFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~ 43 (363)
++.+|++|++||++|+..-.
T Consensus 25 ~~~VA~~L~e~g~dv~atDI 44 (129)
T COG1255 25 FLDVAKRLAERGFDVLATDI 44 (129)
T ss_pred HHHHHHHHHHcCCcEEEEec
Confidence 67899999999999886543
No 179
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=34.81 E-value=94 Score=26.53 Aligned_cols=41 Identities=20% Similarity=0.103 Sum_probs=27.9
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
|++..-+.+++++.-.+.|. ---..++++|+++|++|.+..
T Consensus 1 ~~~~~~~~k~~lITGas~~~-GIG~a~a~~la~~G~~v~~~~ 41 (260)
T PRK06603 1 MTTGLLQGKKGLITGIANNM-SISWAIAQLAKKHGAELWFTY 41 (260)
T ss_pred CCCcccCCcEEEEECCCCCc-chHHHHHHHHHHcCCEEEEEe
Confidence 55543344677788776521 145788999999999988753
No 180
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=34.71 E-value=43 Score=29.08 Aligned_cols=22 Identities=27% Similarity=0.132 Sum_probs=18.3
Q ss_pred HHHHHHHHHhCCCEEEEEeCCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~~ 45 (363)
-.+|+.+|.+.||+||++|-..
T Consensus 11 G~~L~~~L~~~gh~v~iltR~~ 32 (297)
T COG1090 11 GRALTARLRKGGHQVTILTRRP 32 (297)
T ss_pred hHHHHHHHHhCCCeEEEEEcCC
Confidence 3678899999999999998543
No 181
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.70 E-value=44 Score=29.53 Aligned_cols=48 Identities=19% Similarity=0.209 Sum_probs=36.2
Q ss_pred hhhccccCCCCCCcEEEEecCCCc--C-----------------CChhHHHHHHHHHhhCCCCeEEE
Q 039413 268 PECLTWLDSQQPTSVVYVCLGSIC--N-----------------LPSSQLIELGLGLEASNKPFVWV 315 (363)
Q Consensus 268 ~~~~~wLd~~~~~sVIyvsfGS~~--~-----------------l~~~~~~~~~~~l~~~~~~flW~ 315 (363)
..+.+.|++.++-.+|.|.||++- . --+..+++|++....-..+|+|+
T Consensus 166 k~i~~~l~~~~~~a~vVV~lGaND~q~~~~gd~~~kf~S~~W~~eY~kRvd~~l~ia~~~~~~V~Wv 232 (354)
T COG2845 166 KAIPELLDKHPKPAAVVVMLGANDRQDFKVGDVYEKFRSDEWTKEYEKRVDAILKIAHTHKVPVLWV 232 (354)
T ss_pred HHHHHHHHhcCCccEEEEEecCCCHHhcccCCeeeecCchHHHHHHHHHHHHHHHHhcccCCcEEEe
Confidence 556777888766679999999963 0 11245788888888888999997
No 182
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=34.64 E-value=43 Score=26.18 Aligned_cols=22 Identities=32% Similarity=0.175 Sum_probs=18.8
Q ss_pred HHHHHHHHHhCCCEEEEEeCCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~~ 45 (363)
-..+|..|+++||+|++.+...
T Consensus 11 G~AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 11 GTALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp HHHHHHHHHHCTEEEEEETSCH
T ss_pred HHHHHHHHHHcCCEEEEEeccH
Confidence 3578999999999999998753
No 183
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=34.32 E-value=1.1e+02 Score=23.95 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=29.8
Q ss_pred eEEEEcCC-------CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPFL-------APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p-------~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
++++|-.| +++|+.-+..-+.+|.++|.+..++.+-
T Consensus 45 KvIifGvPgAFtPtCs~~HvPGyi~~a~elksKGVd~iicvSV 87 (171)
T KOG0541|consen 45 KVILFGVPGAFTPTCSSSHVPGYIEKADELKSKGVDEIICVSV 87 (171)
T ss_pred eEEEEcCCCccCCccccccCchHHHHHHHHHhcCCcEEEEEec
Confidence 66666555 6899999999999999999987777653
No 184
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=34.09 E-value=41 Score=31.87 Aligned_cols=38 Identities=29% Similarity=0.315 Sum_probs=28.5
Q ss_pred ceEEEEcCCCCCCHHH------------HHHHHHHHHhCCCEEEEEeCCC
Q 039413 8 SHFLLLPFLAPGHMIP------------MFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p------------~l~La~~La~rGh~VT~~t~~~ 45 (363)
.+|++-.-|.+=-+.| -..||+++..||++||+++.+.
T Consensus 257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~ 306 (475)
T PRK13982 257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV 306 (475)
T ss_pred CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc
Confidence 3677666666555554 4578999999999999998753
No 185
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=34.07 E-value=50 Score=30.50 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=27.2
Q ss_pred eEEEEcCC---CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPFL---APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p---~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
-+.+=|+. --||+.|++.|. .|.+.||+|+++...
T Consensus 36 Y~GfDPTa~slHlGhlv~l~kL~-~fQ~aGh~~ivLigd 73 (401)
T COG0162 36 YIGFDPTAPSLHLGHLVPLMKLR-RFQDAGHKPIVLIGD 73 (401)
T ss_pred EEeeCCCCCccchhhHHHHHHHH-HHHHCCCeEEEEecc
Confidence 35666655 349999998875 899999999998764
No 186
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=33.93 E-value=1.2e+02 Score=22.25 Aligned_cols=37 Identities=19% Similarity=0.096 Sum_probs=32.3
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
|+++..-++.|=......+++.|+++|.+|-++.++.
T Consensus 1 ~i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~D~ 37 (116)
T cd02034 1 KIAITGKGGVGKTTIAALLARYLAEKGKPVLAIDADP 37 (116)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEECCc
Confidence 4677778888999999999999999999999998765
No 187
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=33.79 E-value=1.2e+02 Score=28.10 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=32.5
Q ss_pred CceEEEEc-CCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 7 QSHFLLLP-FLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p-~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.+-++++| ..+.||-.=+++++.++.++|.++.+++.-
T Consensus 125 ~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~R 163 (409)
T KOG1838|consen 125 DPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHR 163 (409)
T ss_pred CcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCC
Confidence 45677777 668899999999999999999999998763
No 188
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=33.70 E-value=1.2e+02 Score=21.28 Aligned_cols=39 Identities=15% Similarity=0.130 Sum_probs=26.3
Q ss_pred cEEEEecCCCcC-CChhHHHHHHHHHhhC--CCCeEEEEeCC
Q 039413 281 SVVYVCLGSICN-LPSSQLIELGLGLEAS--NKPFVWVIRGE 319 (363)
Q Consensus 281 sVIyvsfGS~~~-l~~~~~~~~~~~l~~~--~~~flW~~~~~ 319 (363)
++|++++||-.. -..+.++.+++.+++. ...+.+.+...
T Consensus 1 ~lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~~~~ 42 (101)
T cd03409 1 GLLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGFQSG 42 (101)
T ss_pred CEEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEEECC
Confidence 378899999764 5566788888888653 24566665543
No 189
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=33.50 E-value=38 Score=28.45 Aligned_cols=21 Identities=24% Similarity=0.267 Sum_probs=18.0
Q ss_pred HHHHHHHHHhCCCEEEEEeCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~ 44 (363)
-..+|+.|+++||+|+.+-..
T Consensus 12 G~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 12 GRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred HHHHHHHHHhCCCceEEEEcC
Confidence 468999999999999998653
No 190
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=33.04 E-value=84 Score=24.84 Aligned_cols=42 Identities=24% Similarity=0.379 Sum_probs=26.0
Q ss_pred chHHHHHHHHhCCCCCcEEEecCCCccHH--H-HHH--Hc-CCCcEEEec
Q 039413 103 LQLPFENLFERQTLKPCCIISDMCFPWTV--D-TAA--KF-NVPRIIFHE 146 (363)
Q Consensus 103 ~~~~~~~ll~~~~~~~d~vI~D~~~~~~~--~-vA~--~~-~iP~v~~~~ 146 (363)
..+.+.+++++ .+||+||+-..+.... . +-+ .+ ++|.+.+.|
T Consensus 77 ~~~~l~~~l~~--~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 77 FARRLIRLLRE--FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHHHhh--cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 34578888887 7899999886653222 2 222 23 467666554
No 191
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=32.79 E-value=71 Score=27.60 Aligned_cols=39 Identities=5% Similarity=0.118 Sum_probs=24.4
Q ss_pred cEEEEecCCCcCCChh-HHHHHHHHHhh--CCCCeEEEEeCC
Q 039413 281 SVVYVCLGSICNLPSS-QLIELGLGLEA--SNKPFVWVIRGE 319 (363)
Q Consensus 281 sVIyvsfGS~~~l~~~-~~~~~~~~l~~--~~~~flW~~~~~ 319 (363)
.++.+||||...-..+ -+..+-+.+++ -+..|-|++.+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 4899999998865444 67777776665 356899998765
No 192
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=32.52 E-value=84 Score=22.23 Aligned_cols=36 Identities=17% Similarity=0.103 Sum_probs=25.0
Q ss_pred cEEEEecCCCcCCChhHHHHHHHHHhhC--CCCeEEEE
Q 039413 281 SVVYVCLGSICNLPSSQLIELGLGLEAS--NKPFVWVI 316 (363)
Q Consensus 281 sVIyvsfGS~~~l~~~~~~~~~~~l~~~--~~~flW~~ 316 (363)
++|+++.||...-..+.+.++++.+++. ..++-+.+
T Consensus 1 ~ivlv~hGS~~~~~~~~~~~l~~~l~~~~~~~~v~~af 38 (101)
T cd03416 1 ALLLVGHGSRDPRAAEALEALAERLRERLPGDEVELAF 38 (101)
T ss_pred CEEEEEcCCCCHHHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 4788999997754556788888888754 24565554
No 193
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=32.16 E-value=1e+02 Score=24.83 Aligned_cols=47 Identities=26% Similarity=0.314 Sum_probs=29.1
Q ss_pred hhccccCCCCCCcEEEEecCCCcCC---C----------------hhHHHHHHHHHhhCCCCeEEEE
Q 039413 269 ECLTWLDSQQPTSVVYVCLGSICNL---P----------------SSQLIELGLGLEASNKPFVWVI 316 (363)
Q Consensus 269 ~~~~wLd~~~~~sVIyvsfGS~~~l---~----------------~~~~~~~~~~l~~~~~~flW~~ 316 (363)
.+.+++.+..+. +|.+++|++-.. + .+.++++++.+++.+.+++|.-
T Consensus 50 ~~~~~l~~~~pd-~vii~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~vili~ 115 (200)
T cd01829 50 KLKELIAEEKPD-VVVVFLGANDRQDIRDGDGYLKFGSPEWEEEYRQRIDELLNVARAKGVPVIWVG 115 (200)
T ss_pred HHHHHHhcCCCC-EEEEEecCCCCccccCCCceeecCChhHHHHHHHHHHHHHHHHHhCCCcEEEEc
Confidence 345555555555 999999997521 1 1233556666666677888864
No 194
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=32.12 E-value=80 Score=25.28 Aligned_cols=40 Identities=23% Similarity=0.301 Sum_probs=27.4
Q ss_pred hHHHHHHHHhCCCCCcEEEecCCCc-c-HHHHHHHcCCCcEEEec
Q 039413 104 QLPFENLFERQTLKPCCIISDMCFP-W-TVDTAAKFNVPRIIFHE 146 (363)
Q Consensus 104 ~~~~~~ll~~~~~~~d~vI~D~~~~-~-~~~vA~~~~iP~v~~~~ 146 (363)
...++.+++. +||+||...... . ....-++.|+|++.+..
T Consensus 59 ~~n~E~ll~l---~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~~ 100 (186)
T cd01141 59 SLNVELIVAL---KPDLVILYGGFQAQTILDKLEQLGIPVLYVNE 100 (186)
T ss_pred CCCHHHHhcc---CCCEEEEecCCCchhHHHHHHHcCCCEEEeCC
Confidence 4677888864 899999864432 2 34445678999888753
No 195
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=31.30 E-value=2.2e+02 Score=27.36 Aligned_cols=30 Identities=17% Similarity=0.154 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeCCCChhhhHH
Q 039413 21 MIPMFDTARLLAQRGAIVTIVTTPVNAARFKT 52 (363)
Q Consensus 21 ~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~ 52 (363)
-.-+..+++.|.+.|+++. +|....+.++.
T Consensus 14 K~~iv~lAk~L~~lGfeI~--AT~GTak~L~e 43 (513)
T PRK00881 14 KTGIVEFAKALVELGVEIL--STGGTAKLLAE 43 (513)
T ss_pred cccHHHHHHHHHHCCCEEE--EcchHHHHHHH
Confidence 3457899999999999884 55555554443
No 196
>TIGR01005 eps_transp_fam exopolysaccharide transport protein family. The model describes the exopolysaccharide transport protein family in bacteria. The transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed atleast seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export.
Probab=31.29 E-value=4.9e+02 Score=26.52 Aligned_cols=41 Identities=12% Similarity=0.047 Sum_probs=32.4
Q ss_pred CceEEEEc--CCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 7 QSHFLLLP--FLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 7 ~~~lv~~p--~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
..+++.|. -++.|-......||..|+..|.+|-++-.+...
T Consensus 545 ~~kvi~vts~~~G~GKTt~a~nLA~~lA~~g~rvLlID~D~~~ 587 (754)
T TIGR01005 545 EPEVVETQRPRPVLGKSDIEANAAALIASGGKRALLIDADGRK 587 (754)
T ss_pred CceEEEeecCCCCCChhHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 34555555 557899999999999999999999999776443
No 197
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=30.96 E-value=3.2e+02 Score=24.85 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=44.0
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecC
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQF 71 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 71 (363)
.++.|++++-..--||--=|.-=|.-||+.|.+|+++....... ..... .+++|+++.++.
T Consensus 10 ~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~VdliGy~~s~p-~e~l~-----~hprI~ih~m~~ 70 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQVDLIGYVESIP-LEELL-----NHPRIRIHGMPN 70 (444)
T ss_pred cccceEEEEEecccCCChHHHHHHHHHHHcCCeEEEEEecCCCC-hHHHh-----cCCceEEEeCCC
Confidence 35668888888888998888888999999999999986532211 11222 246799998863
No 198
>PRK05973 replicative DNA helicase; Provisional
Probab=30.84 E-value=1.3e+02 Score=25.61 Aligned_cols=42 Identities=14% Similarity=0.025 Sum_probs=36.1
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARF 50 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~ 50 (363)
-+++..-|+.|=..-.++++.+.+.+|..|.|++.+.....+
T Consensus 66 l~LIaG~PG~GKT~lalqfa~~~a~~Ge~vlyfSlEes~~~i 107 (237)
T PRK05973 66 LVLLGARPGHGKTLLGLELAVEAMKSGRTGVFFTLEYTEQDV 107 (237)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEEEeCCHHHH
Confidence 467777899999999999999999999999999998765544
No 199
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=30.73 E-value=81 Score=28.48 Aligned_cols=43 Identities=12% Similarity=0.111 Sum_probs=37.0
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCChhh
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNAAR 49 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~~ 49 (363)
..+|+++-.-+-|.+.-..++.+.|.++ +.+||+++.......
T Consensus 5 ~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l 49 (352)
T PRK10422 5 FRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPI 49 (352)
T ss_pred CceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHH
Confidence 4479999999999999999999999987 899999998765543
No 200
>PF03720 UDPG_MGDP_dh_C: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; InterPro: IPR014027 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the C-terminal substrate-binding domain of these enzymes. Structural studies indicate that this domain forms an incomplete dinucleotide binding fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3GG2_D 1DLI_A 1DLJ_A 2Y0E_D 2Y0D_B 2Y0C_D 1MV8_B 1MUU_A 1MFZ_C 3TDK_B ....
Probab=30.55 E-value=68 Score=23.11 Aligned_cols=26 Identities=27% Similarity=0.400 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 22 IPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 22 ~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
.|.+.++++|.++|.+|.+.=+.-..
T Consensus 17 Sp~~~l~~~L~~~g~~V~~~DP~v~~ 42 (106)
T PF03720_consen 17 SPALELIEELKERGAEVSVYDPYVDE 42 (106)
T ss_dssp -HHHHHHHHHHHTT-EEEEE-TTSHH
T ss_pred CHHHHHHHHHHHCCCEEEEECCccCh
Confidence 58899999999999999988664433
No 201
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=30.31 E-value=67 Score=25.87 Aligned_cols=30 Identities=20% Similarity=0.098 Sum_probs=23.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 16 LAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 16 p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.+-+...-...+.++|.++|++|.++.++.
T Consensus 8 tGs~~a~~~~~ll~~L~~~g~~V~vi~T~~ 37 (177)
T TIGR02113 8 TGSIAAYKAADLTSQLTKLGYDVTVLMTQA 37 (177)
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEEEEChH
Confidence 345555566799999999999999998854
No 202
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=30.27 E-value=71 Score=26.70 Aligned_cols=27 Identities=30% Similarity=0.210 Sum_probs=22.2
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
=+++|..+.||= +..||++||+|+=+=
T Consensus 40 rvLvPgCG~g~D------~~~La~~G~~VvGvD 66 (218)
T PF05724_consen 40 RVLVPGCGKGYD------MLWLAEQGHDVVGVD 66 (218)
T ss_dssp EEEETTTTTSCH------HHHHHHTTEEEEEEE
T ss_pred eEEEeCCCChHH------HHHHHHCCCeEEEEe
Confidence 467899999986 567899999998763
No 203
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=30.13 E-value=78 Score=24.02 Aligned_cols=39 Identities=21% Similarity=0.250 Sum_probs=32.8
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCC-EEEEEeC
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGA-IVTIVTT 43 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh-~VT~~t~ 43 (363)
++..+++.++....+|.--+..++++|.++|. ++.++..
T Consensus 51 e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivG 90 (132)
T TIGR00640 51 EADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVG 90 (132)
T ss_pred HcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 35678899998889999999999999999987 5666665
No 204
>PRK05920 aromatic acid decarboxylase; Validated
Probab=29.66 E-value=67 Score=26.57 Aligned_cols=37 Identities=14% Similarity=0.049 Sum_probs=27.7
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
+|++- ..+-+...=...++++|.+.|++|+++.|..-
T Consensus 5 rIllg-ITGsiaa~ka~~lvr~L~~~g~~V~vi~T~~A 41 (204)
T PRK05920 5 RIVLA-ITGASGAIYGVRLLECLLAADYEVHLVISKAA 41 (204)
T ss_pred EEEEE-EeCHHHHHHHHHHHHHHHHCCCEEEEEEChhH
Confidence 44433 44555567888999999999999999988653
No 205
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=29.60 E-value=75 Score=25.71 Aligned_cols=38 Identities=24% Similarity=0.195 Sum_probs=27.0
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
+|++.-..+.| ..-...+.++|.++|++|.++.++.-.
T Consensus 3 ~Ill~vtGsia-a~~~~~li~~L~~~g~~V~vv~T~~A~ 40 (182)
T PRK07313 3 NILLAVSGSIA-AYKAADLTSQLTKRGYQVTVLMTKAAT 40 (182)
T ss_pred EEEEEEeChHH-HHHHHHHHHHHHHCCCEEEEEEChhHH
Confidence 45544444434 445789999999999999999886433
No 206
>PLN02891 IMP cyclohydrolase
Probab=29.33 E-value=2e+02 Score=27.61 Aligned_cols=89 Identities=13% Similarity=0.125 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCC-CCCCCChhHHHHHH
Q 039413 20 HMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCEN-CDLLPTTDFARFLN 98 (363)
Q Consensus 20 H~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 98 (363)
.-.-+..||+.|.+.|.++ ++|....+.++.. +|.+..+..- .++|+-++- ...+. .....
T Consensus 31 DKtgi~~fAk~L~~~gveI--iSTgGTak~L~e~---------Gi~v~~Vsd~---TgfPEiL~GRVKTLH----PkIhg 92 (547)
T PLN02891 31 DKTDLALLANGLQELGYTI--VSTGGTASALEAA---------GVSVTKVEEL---TNFPEMLDGRVKTLH----PAVHG 92 (547)
T ss_pred cccCHHHHHHHHHHCCCEE--EEcchHHHHHHHc---------CCceeeHHhc---cCCchhhCCcccccC----chhhh
Confidence 3345789999999987665 5776665554432 4666665421 345542211 00110 11111
Q ss_pred HH---HhchHHHHHHHHhCCCCCcEEEecCC
Q 039413 99 SL---HMLQLPFENLFERQTLKPCCIISDMC 126 (363)
Q Consensus 99 ~~---~~~~~~~~~ll~~~~~~~d~vI~D~~ 126 (363)
.+ +.....++++-+.--.++|+||+..+
T Consensus 93 GILa~r~~~~h~~~l~~~~I~~IDlVvVNLY 123 (547)
T PLN02891 93 GILARRDQEHHMEALNEHGIGTIDVVVVNLY 123 (547)
T ss_pred hhhcCCCCHHHHHHHHHcCCCceeeEEEecc
Confidence 11 12334555554432246899888854
No 207
>PRK04148 hypothetical protein; Provisional
Probab=29.29 E-value=60 Score=24.79 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=21.4
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.+++.+-.. .| ..+|..|+++||+|+.+=.
T Consensus 18 ~kileIG~G-fG-----~~vA~~L~~~G~~ViaIDi 47 (134)
T PRK04148 18 KKIVELGIG-FY-----FKVAKKLKESGFDVIVIDI 47 (134)
T ss_pred CEEEEEEec-CC-----HHHHHHHHHCCCEEEEEEC
Confidence 456666654 33 3468899999999998754
No 208
>COG4081 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.13 E-value=1.1e+02 Score=22.95 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=26.2
Q ss_pred EEEEcCC-CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 10 FLLLPFL-APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 10 lv~~p~p-~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
++++.-| ..-.+...+=++.+|-.+|++||+..++
T Consensus 6 lv~lGCPeiP~qissaiYls~klkkkgf~v~Vaate 41 (148)
T COG4081 6 LVSLGCPEIPPQISSAIYLSHKLKKKGFDVTVAATE 41 (148)
T ss_pred EEEecCCCCCccchHHHHHHHHhhccCccEEEecCH
Confidence 4455444 3455666778899999999999999875
No 209
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=29.10 E-value=1.6e+02 Score=24.50 Aligned_cols=22 Identities=23% Similarity=0.066 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhCCCEEEEEeC
Q 039413 22 IPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 22 ~p~l~La~~La~rGh~VT~~t~ 43 (363)
.--..++++|+++|++|.++.-
T Consensus 18 ~iG~~l~~~L~~~G~~Vi~~~r 39 (239)
T PRK07666 18 GIGRAVAIALAKEGVNVGLLAR 39 (239)
T ss_pred hHHHHHHHHHHHCCCEEEEEeC
Confidence 4467889999999999988764
No 210
>PRK13604 luxD acyl transferase; Provisional
Probab=29.01 E-value=1.4e+02 Score=26.54 Aligned_cols=33 Identities=18% Similarity=0.069 Sum_probs=25.8
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEE
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIV 41 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~ 41 (363)
..+++.....++..-+..+|+.|+++|++|..+
T Consensus 38 ~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrf 70 (307)
T PRK13604 38 NTILIASGFARRMDHFAGLAEYLSSNGFHVIRY 70 (307)
T ss_pred CEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEe
Confidence 456666566666666999999999999998755
No 211
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=28.96 E-value=46 Score=31.46 Aligned_cols=21 Identities=29% Similarity=0.197 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhCCCEEEEEeC
Q 039413 23 PMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~ 43 (363)
--+.-|.+|+++||+||++=.
T Consensus 11 AgL~~a~~La~~g~~vt~~ea 31 (485)
T COG3349 11 AGLAAAYELADAGYDVTLYEA 31 (485)
T ss_pred HHHHHHHHHHhCCCceEEEec
Confidence 346778999999999999854
No 212
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=28.86 E-value=1.6e+02 Score=21.46 Aligned_cols=37 Identities=22% Similarity=-0.048 Sum_probs=30.9
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
++....++..|-....-++..|.++|++|.++.....
T Consensus 2 ~l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~~~~~ 38 (125)
T cd02065 2 VLGATVGGDVHDIGKNIVAIALRDNGFEVIDLGVDVP 38 (125)
T ss_pred EEEEEcCCchhhHHHHHHHHHHHHCCCEEEEcCCCCC
Confidence 4566678899999999999999999999998865433
No 213
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=28.65 E-value=58 Score=27.43 Aligned_cols=21 Identities=24% Similarity=0.036 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhCCCEEEEEe
Q 039413 22 IPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 22 ~p~l~La~~La~rGh~VT~~t 42 (363)
-.-.++|++|+++|++|+++.
T Consensus 26 gIG~AIA~~la~~Ga~Vvlv~ 46 (227)
T TIGR02114 26 HLGKIITETFLSAGHEVTLVT 46 (227)
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 345789999999999999874
No 214
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=28.62 E-value=86 Score=26.11 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=29.5
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
|++-.+|+.|-..-..+|+++|.+++|+|-.++.
T Consensus 4 iIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 4 IILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred EEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 5556699999999999999999999999887654
No 215
>TIGR00355 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase. Involved in purine ribonucleotide biosynthesis. The IMP cyclohydrolase activity is in the N-terminal region.
Probab=28.44 E-value=2.4e+02 Score=27.05 Aligned_cols=29 Identities=21% Similarity=0.189 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCCChhhhHH
Q 039413 22 IPMFDTARLLAQRGAIVTIVTTPVNAARFKT 52 (363)
Q Consensus 22 ~p~l~La~~La~rGh~VT~~t~~~~~~~~~~ 52 (363)
.-+..+++.|.+.|+++. +|....+.++.
T Consensus 11 ~~iv~lAk~L~~lGfeIi--ATgGTak~L~e 39 (511)
T TIGR00355 11 TGIVEFAQGLVERGVELL--STGGTAKLLAE 39 (511)
T ss_pred ccHHHHHHHHHHCCCEEE--EechHHHHHHH
Confidence 446789999999999884 55555554443
No 216
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=28.39 E-value=1.2e+02 Score=25.70 Aligned_cols=34 Identities=26% Similarity=0.200 Sum_probs=21.6
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
-++++|.|--= .+-+-.....|+++|++|++++.
T Consensus 13 vL~v~aHPDDe-~~g~ggtla~~~~~G~~V~v~~l 46 (237)
T COG2120 13 VLVVFAHPDDE-EIGCGGTLAKLAARGVEVTVVCL 46 (237)
T ss_pred EEEEecCCcch-hhccHHHHHHHHHCCCeEEEEEc
Confidence 36666666321 12244555677999999999864
No 217
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=28.27 E-value=3e+02 Score=25.31 Aligned_cols=36 Identities=19% Similarity=0.152 Sum_probs=21.3
Q ss_pred CCCcEEE-ecCCC--ccHHHHHHHcCCC--cEEEecccHHH
Q 039413 116 LKPCCII-SDMCF--PWTVDTAAKFNVP--RIIFHEFSCFC 151 (363)
Q Consensus 116 ~~~d~vI-~D~~~--~~~~~vA~~~~iP--~v~~~~~~~~~ 151 (363)
.++|+|| .|+-. ......+++.|++ +|.+.+-..|+
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~PqvWA 121 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYISPQVWA 121 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEECCceee
Confidence 5789877 78522 2334556677887 66554444443
No 218
>PRK04940 hypothetical protein; Provisional
Probab=28.20 E-value=1.6e+02 Score=23.78 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=24.2
Q ss_pred CCcEEEecCCC-ccHHHHHHHcCCCcEEEeccc
Q 039413 117 KPCCIISDMCF-PWTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 117 ~~d~vI~D~~~-~~~~~vA~~~~iP~v~~~~~~ 148 (363)
+..++|--.+. .|+.-+|+++|+|.|.+.|.-
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPAv 92 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPNL 92 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCCC
Confidence 34566655544 478889999999999998864
No 219
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=28.16 E-value=1e+02 Score=28.83 Aligned_cols=35 Identities=11% Similarity=0.313 Sum_probs=23.1
Q ss_pred HHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEec
Q 039413 107 FENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHE 146 (363)
Q Consensus 107 ~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~ 146 (363)
+++++++ .++|++|.+. ....+|+++|+|.+.++.
T Consensus 362 ~~~~i~~--~~pdliig~~---~~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 362 VGDMIAR--TEPELIFGTQ---MERHIGKRLDIPCAVISA 396 (430)
T ss_pred HHHHHHh--hCCCEEEecc---hhhHHHHHcCCCEEEEeC
Confidence 4444444 4688888876 344578889999877643
No 220
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=28.01 E-value=79 Score=28.00 Aligned_cols=42 Identities=12% Similarity=0.080 Sum_probs=35.7
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNAARF 50 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~~~ 50 (363)
+|+++-..+-|.+.-..++.++|.++ +.+||+++.......+
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~~~~~~ 44 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEGFADIV 44 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChhHhhhh
Confidence 47888888999999999999999997 9999999986654433
No 221
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=27.97 E-value=1.3e+02 Score=23.43 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=29.6
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+.++-..+.|=..-+..|+++|.++|++|.++-..
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~ 36 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHD 36 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 45667778888889999999999999999998654
No 222
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=27.89 E-value=1.7e+02 Score=26.58 Aligned_cols=48 Identities=8% Similarity=-0.021 Sum_probs=28.2
Q ss_pred hHHHHHHHHhCCCCCcEEE-ecCCC--ccHHHHHHHc--CCCcEEEecccHHHH
Q 039413 104 QLPFENLFERQTLKPCCII-SDMCF--PWTVDTAAKF--NVPRIIFHEFSCFCL 152 (363)
Q Consensus 104 ~~~~~~ll~~~~~~~d~vI-~D~~~--~~~~~vA~~~--~iP~v~~~~~~~~~~ 152 (363)
...++++.+.. .+||++| .|+-. .....-+++. |+|++.+.+-..|+|
T Consensus 64 ~~~~~~~~~~~-~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~PqvWAW 116 (347)
T PRK14089 64 KKAIKEMVELA-KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILPQVWAW 116 (347)
T ss_pred HHHHHHHHHHh-cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceee
Confidence 33444444442 5788877 68532 2344566677 699988766555543
No 223
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=27.60 E-value=4.9e+02 Score=23.97 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=60.7
Q ss_pred EcCCCCCCHHHHHHHHHHHHhCC-CEEEEEeCCCCh--hhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCC
Q 039413 13 LPFLAPGHMIPMFDTARLLAQRG-AIVTIVTTPVNA--ARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLP 89 (363)
Q Consensus 13 ~p~p~~gH~~p~l~La~~La~rG-h~VT~~t~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (363)
+-+..+=-++=|.+|.+++-+.+ .+..++.|..+. +....+.. ...+..|.. .+. ....
T Consensus 8 ~I~GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le----------~~~i~~pdy--~L~----i~~~-- 69 (383)
T COG0381 8 TIFGTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLE----------LFGIRKPDY--DLN----IMKP-- 69 (383)
T ss_pred EEEecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHH----------HhCCCCCCc--chh----cccc--
Confidence 44567788899999999999987 777777665443 22222211 111110100 011 1100
Q ss_pred ChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEE--ecCCCccH-HHHHHHcCCCcEEEec
Q 039413 90 TTDFARFLNSLHMLQLPFENLFERQTLKPCCII--SDMCFPWT-VDTAAKFNVPRIIFHE 146 (363)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI--~D~~~~~~-~~vA~~~~iP~v~~~~ 146 (363)
. ..+.+....+...+.+++.+ .+||+|+ -|.....+ ..+|.+.+||+.-+-.
T Consensus 70 ~---~tl~~~t~~~i~~~~~vl~~--~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEA 124 (383)
T COG0381 70 G---QTLGEITGNIIEGLSKVLEE--EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEA 124 (383)
T ss_pred C---CCHHHHHHHHHHHHHHHHHh--hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEec
Confidence 0 11222223344667778876 6888777 46555444 5566677899876543
No 224
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=27.56 E-value=39 Score=30.16 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=24.4
Q ss_pred CCCcEEE-ecCCC-ccHHHHHHHcCCCcEEEeccc
Q 039413 116 LKPCCII-SDMCF-PWTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI-~D~~~-~~~~~vA~~~~iP~v~~~~~~ 148 (363)
..||+|| +|.-- ..+..=|.++|||.|++.-+.
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn 185 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTN 185 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCC
Confidence 3588766 67654 466778899999999987554
No 225
>PRK08939 primosomal protein DnaI; Reviewed
Probab=27.49 E-value=99 Score=27.44 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=33.2
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
..+++..-+|.|=.--+..++.+|+++|..|+|++.+..
T Consensus 157 ~gl~L~G~~G~GKThLa~Aia~~l~~~g~~v~~~~~~~l 195 (306)
T PRK08939 157 KGLYLYGDFGVGKSYLLAAIANELAKKGVSSTLLHFPEF 195 (306)
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEEHHHH
Confidence 368888888888888889999999999999999987543
No 226
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=27.48 E-value=80 Score=24.80 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=22.9
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.+++++- -|. .-...++.|.+.|++||+++++
T Consensus 14 ~~vlVvG---GG~--va~rka~~Ll~~ga~V~VIsp~ 45 (157)
T PRK06719 14 KVVVIIG---GGK--IAYRKASGLKDTGAFVTVVSPE 45 (157)
T ss_pred CEEEEEC---CCH--HHHHHHHHHHhCCCEEEEEcCc
Confidence 3566554 232 3478889999999999999654
No 227
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.47 E-value=1.3e+02 Score=23.00 Aligned_cols=47 Identities=19% Similarity=0.281 Sum_probs=29.0
Q ss_pred hhccccCCCCCCcEEEEecCCCcCC---Ch----hHHHHHHHHHhhC--CCCeEEEE
Q 039413 269 ECLTWLDSQQPTSVVYVCLGSICNL---PS----SQLIELGLGLEAS--NKPFVWVI 316 (363)
Q Consensus 269 ~~~~wLd~~~~~sVIyvsfGS~~~l---~~----~~~~~~~~~l~~~--~~~flW~~ 316 (363)
.+.+|+...++ .+|.+++|++-.. +. +.++++++.+.+. +-+++|.-
T Consensus 31 ~~~~~~~~~~p-d~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~i~~~~p~~~ii~~~ 86 (157)
T cd01833 31 AAADWVLAAKP-DVVLLHLGTNDLVLNRDPDTAPDRLRALIDQMRAANPDVKIIVAT 86 (157)
T ss_pred HhhhccccCCC-CEEEEeccCcccccCCCHHHHHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 34466666554 4999999997632 32 4455666666543 34677753
No 228
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=27.36 E-value=1e+02 Score=27.80 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=35.9
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCChhhh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNAARF 50 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~~~ 50 (363)
+|+++-..+-|.++-..++.+.|.++ +.+||+++.+.....+
T Consensus 2 rILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~ 45 (348)
T PRK10916 2 KILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLL 45 (348)
T ss_pred cEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHH
Confidence 68899999999999999999999985 8999999986554433
No 229
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=27.13 E-value=1.3e+02 Score=25.97 Aligned_cols=31 Identities=13% Similarity=-0.112 Sum_probs=23.6
Q ss_pred CCcEEEecCCCc------cHHHHHHHcCCCcEEEecc
Q 039413 117 KPCCIISDMCFP------WTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 117 ~~d~vI~D~~~~------~~~~vA~~~~iP~v~~~~~ 147 (363)
.||+|++-.-.. -+..+|+.+|+|.+.+...
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 599999865443 3468999999999887653
No 230
>PRK11617 endonuclease V; Provisional
Probab=27.13 E-value=52 Score=27.62 Aligned_cols=40 Identities=23% Similarity=0.229 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCCCcEEEecCCCcc---HHHHHHHc----CCCcEEEe
Q 039413 106 PFENLFERQTLKPCCIISDMCFPW---TVDTAAKF----NVPRIIFH 145 (363)
Q Consensus 106 ~~~~ll~~~~~~~d~vI~D~~~~~---~~~vA~~~----~iP~v~~~ 145 (363)
.+.++++++...+|+|++|-.... ..++|.++ ++|.|++.
T Consensus 86 ~~l~al~~l~~~PdlllvDG~G~~HPR~~GlA~HlGv~~~~PtIGVA 132 (224)
T PRK11617 86 ALLAAWEQLSQKPDLVFVDGHGIAHPRRLGVASHFGLLVDVPTIGVA 132 (224)
T ss_pred HHHHHHHhcCcCCCEEEEcCceeECCCCcceeeEEEeecCCCEEEEE
Confidence 344455554567999999976532 23555544 35666653
No 231
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=27.11 E-value=4.8e+02 Score=24.55 Aligned_cols=41 Identities=17% Similarity=0.264 Sum_probs=35.5
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
.-|+++-.-+.|-....-.||+.|..+|+.|-++.++-+..
T Consensus 101 ~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllVaaD~~Rp 141 (451)
T COG0541 101 TVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLVAADTYRP 141 (451)
T ss_pred eEEEEEeccCCChHhHHHHHHHHHHHcCCceEEEecccCCh
Confidence 34777778899999999999999999999999999876544
No 232
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=27.08 E-value=77 Score=25.20 Aligned_cols=33 Identities=30% Similarity=0.159 Sum_probs=22.5
Q ss_pred CceEEEEcCCCCCCHHH--HHHHHHHHHhCCCEEEEEe
Q 039413 7 QSHFLLLPFLAPGHMIP--MFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p--~l~La~~La~rGh~VT~~t 42 (363)
..+++++.-++ -|- -+.+|+.|+++|++|+++.
T Consensus 25 ~~~v~il~G~G---nNGgDgl~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 25 GPRVLILCGPG---NNGGDGLVAARHLANRGYNVTVYL 59 (169)
T ss_dssp T-EEEEEE-SS---HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEEECCC---CChHHHHHHHHHHHHCCCeEEEEE
Confidence 45677776443 343 4667899999999999954
No 233
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=26.82 E-value=68 Score=24.59 Aligned_cols=21 Identities=38% Similarity=0.215 Sum_probs=17.6
Q ss_pred HHHHHHHHhCCCEEEEEeCCC
Q 039413 25 FDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 25 l~La~~La~rGh~VT~~t~~~ 45 (363)
.-+|..|++.||+|++++...
T Consensus 11 ~~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 11 SLYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp HHHHHHHHHTTCEEEEEESHH
T ss_pred HHHHHHHHHCCCceEEEEccc
Confidence 457889999999999998754
No 234
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=26.76 E-value=4.8e+02 Score=23.57 Aligned_cols=33 Identities=33% Similarity=0.420 Sum_probs=24.6
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCC-EEEEEeCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGA-IVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh-~VT~~t~~ 44 (363)
+.+|+++-..+-| ..+++.|+..|+ +||++-.+
T Consensus 24 ~~~VlVvG~GglG-----s~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALG-----TANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 4578887766544 567889999998 89988654
No 235
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=26.55 E-value=1.5e+02 Score=24.08 Aligned_cols=43 Identities=14% Similarity=0.264 Sum_probs=28.1
Q ss_pred HHHHHHHhCCCCCcEEEecCCCc-cHHHHHHHcCCCcEEEeccc
Q 039413 106 PFENLFERQTLKPCCIISDMCFP-WTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 106 ~~~~ll~~~~~~~d~vI~D~~~~-~~~~vA~~~~iP~v~~~~~~ 148 (363)
.+++++++....-.++|--++.. ++.-+|+++++|.|.+.|+-
T Consensus 48 ~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 48 QLEQLIEELKPENVVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred HHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 44556665322234555555543 56679999999999998764
No 236
>PRK00090 bioD dithiobiotin synthetase; Reviewed
Probab=26.53 E-value=1.4e+02 Score=24.82 Aligned_cols=28 Identities=18% Similarity=0.048 Sum_probs=24.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 15 FLAPGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 15 ~p~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
-+.-|-....+.|++.|.++|++|-++-
T Consensus 8 ~t~~GKT~vs~~L~~~l~~~g~~v~~~K 35 (222)
T PRK00090 8 DTDVGKTVVTAALAQALREAGYSVAGYK 35 (222)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCceEEEe
Confidence 4467889999999999999999998865
No 237
>TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family. This model describes one of two paralogous families of archaealflavoprotein. The other, described by TIGR02699 and typified by the partially characterized AF1518 of Archaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown.
Probab=26.00 E-value=1e+02 Score=26.05 Aligned_cols=34 Identities=15% Similarity=0.281 Sum_probs=26.3
Q ss_pred EcCCCCCCH-HHHHHHHHHHHhC--CCEEEEEeCCCC
Q 039413 13 LPFLAPGHM-IPMFDTARLLAQR--GAIVTIVTTPVN 46 (363)
Q Consensus 13 ~p~p~~gH~-~p~l~La~~La~r--Gh~VT~~t~~~~ 46 (363)
+...+-|+. .=...|+++|.++ |++|+++.++.-
T Consensus 4 ~~itGs~~~~~~~~~l~~~L~~~~~g~~V~vv~T~~a 40 (234)
T TIGR02700 4 WGITGAGHLLVESFQVMKELKREIEELRVSTFVSRAG 40 (234)
T ss_pred EEEeCccHhHHHHHHHHHHHHhhcCCCeEEEEEChhH
Confidence 344455566 5788999999999 999999988643
No 238
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=25.88 E-value=1.6e+02 Score=21.82 Aligned_cols=33 Identities=24% Similarity=0.141 Sum_probs=24.4
Q ss_pred EEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 12 LLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 12 ~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
++-....+.-.-+..+++.|+++|+.|..+...
T Consensus 3 v~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 35 (145)
T PF12695_consen 3 VLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYP 35 (145)
T ss_dssp EEECTTTTTTHHHHHHHHHHHHTTEEEEEESCT
T ss_pred EEECCCCCCHHHHHHHHHHHHHCCCEEEEEecC
Confidence 333344555677899999999999998887543
No 239
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=25.54 E-value=1.4e+02 Score=20.43 Aligned_cols=35 Identities=11% Similarity=-0.009 Sum_probs=26.4
Q ss_pred ceEEEEcCCCC--CCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 8 SHFLLLPFLAP--GHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 8 ~~lv~~p~p~~--gH~~p~l~La~~La~rGh~VT~~t 42 (363)
.+++++|.... .+..-...++..|.+.|.+|.+-.
T Consensus 2 ~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~ 38 (94)
T cd00861 2 FDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDD 38 (94)
T ss_pred eEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 36888887653 456677888888888999998743
No 240
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=25.32 E-value=1.5e+02 Score=23.02 Aligned_cols=45 Identities=13% Similarity=0.043 Sum_probs=29.1
Q ss_pred hccccCCCCCCcEEEEecCCCcC---CCh----hHHHHHHHHHhh--CCCCeEEEE
Q 039413 270 CLTWLDSQQPTSVVYVCLGSICN---LPS----SQLIELGLGLEA--SNKPFVWVI 316 (363)
Q Consensus 270 ~~~wLd~~~~~sVIyvsfGS~~~---l~~----~~~~~~~~~l~~--~~~~flW~~ 316 (363)
+.+++.. .+ .+|.+++|++-. .+. +.+++++..+.+ .+-+|+|.-
T Consensus 41 l~~~~~~-~p-d~vvl~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~~~vi~~~ 94 (169)
T cd01828 41 LDEDVAL-QP-KAIFIMIGINDLAQGTSDEDIVANYRTILEKLRKHFPNIKIVVQS 94 (169)
T ss_pred HHHHhcc-CC-CEEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4455533 33 499999999753 333 345666666666 567899963
No 241
>PF08897 DUF1841: Domain of unknown function (DUF1841); InterPro: IPR014993 This group of proteins are functionally uncharacterised.
Probab=25.27 E-value=51 Score=25.14 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=15.9
Q ss_pred CCCCCHHHHHHHHHHHHh
Q 039413 16 LAPGHMIPMFDTARLLAQ 33 (363)
Q Consensus 16 p~~gH~~p~l~La~~La~ 33 (363)
|..|-.|||++|+-.|+=
T Consensus 57 pe~G~tNPFLHlsmHLsI 74 (137)
T PF08897_consen 57 PEQGETNPFLHLSMHLSI 74 (137)
T ss_pred cccCccchhHHHHHHHHH
Confidence 678999999999999873
No 242
>PRK12342 hypothetical protein; Provisional
Probab=25.11 E-value=1.6e+02 Score=25.37 Aligned_cols=31 Identities=6% Similarity=-0.212 Sum_probs=23.6
Q ss_pred CCcEEEecCCCc------cHHHHHHHcCCCcEEEecc
Q 039413 117 KPCCIISDMCFP------WTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 117 ~~d~vI~D~~~~------~~~~vA~~~~iP~v~~~~~ 147 (363)
.||+|++---.. -+..+|+.+|+|.+.+...
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 499999865443 3578999999999887543
No 243
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed
Probab=24.87 E-value=1.1e+02 Score=26.64 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=29.1
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
+++++. +-.=+.|++.++++|+++|++|+++-.....+
T Consensus 100 ~~llIa--GGiGiaPl~~l~~~l~~~~~~v~l~~g~r~~~ 137 (281)
T PRK06222 100 TVVCVG--GGVGIAPVYPIAKALKEAGNKVITIIGARNKD 137 (281)
T ss_pred eEEEEe--CcCcHHHHHHHHHHHHHCCCeEEEEEecCCHH
Confidence 666665 33448899999999999999999887655443
No 244
>PTZ00445 p36-lilke protein; Provisional
Probab=24.80 E-value=85 Score=26.11 Aligned_cols=28 Identities=14% Similarity=0.154 Sum_probs=22.8
Q ss_pred CCHHH-HHHHHHHHHhCCCEEEEEeCCCC
Q 039413 19 GHMIP-MFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 19 gH~~p-~l~La~~La~rGh~VT~~t~~~~ 46 (363)
+|..| +..+.++|-+.|..|+++|....
T Consensus 74 ~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 74 TSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred ccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 45556 88899999999999999997543
No 245
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=24.74 E-value=74 Score=29.25 Aligned_cols=38 Identities=13% Similarity=0.140 Sum_probs=26.4
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
++--|++|.....|+-+-...+|.+||++|+=|..+-.
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieH 135 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEH 135 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE--
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEecc
Confidence 34569999999999999999999999999997766543
No 246
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=24.67 E-value=1.3e+02 Score=27.93 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=26.4
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 11 LLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 11 v~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
++--||..||.--..++. .|.++||+|++++..
T Consensus 6 ~~~~~P~~setFi~~ei~-~l~~~G~~v~~~s~~ 38 (406)
T PRK15427 6 FLLKFPLSSETFVLNQIT-AFIDMGFEVEIVALQ 38 (406)
T ss_pred EeccCCccchhhHHHHHH-HHHHcCceEEEEEcc
Confidence 334589999998886664 788999999999864
No 247
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=24.64 E-value=73 Score=21.82 Aligned_cols=22 Identities=14% Similarity=0.157 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhCCCEEEEEeCC
Q 039413 23 PMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~~ 44 (363)
.+..+.++|.++||+|+=+...
T Consensus 9 ~Ls~v~~~L~~~GyeVv~l~~~ 30 (80)
T PF03698_consen 9 GLSNVKEALREKGYEVVDLENE 30 (80)
T ss_pred CchHHHHHHHHCCCEEEecCCc
Confidence 3567889999999999977654
No 248
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=24.55 E-value=1.2e+02 Score=29.20 Aligned_cols=35 Identities=11% Similarity=0.351 Sum_probs=22.9
Q ss_pred HHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEe
Q 039413 106 PFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFH 145 (363)
Q Consensus 106 ~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~ 145 (363)
.+++++++ .++|+||.+. +...+|+++|+|++.++
T Consensus 365 ei~~~I~~--~~pdliiGs~---~er~ia~~lgiP~~~is 399 (513)
T CHL00076 365 EVGDMIAR--VEPSAIFGTQ---MERHIGKRLDIPCGVIS 399 (513)
T ss_pred HHHHHHHh--cCCCEEEECc---hhhHHHHHhCCCEEEee
Confidence 33444444 4688888776 34456888888886664
No 249
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=24.53 E-value=1.6e+02 Score=22.49 Aligned_cols=34 Identities=15% Similarity=0.136 Sum_probs=26.9
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
.|.++-....|=..-...|+++|.+||++|-++-
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik 35 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIK 35 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEE
Confidence 4677777788889999999999999999988554
No 250
>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments. Correct positioning of the division plane is a prerequisite for the generation of daughter cells with a normal chromosome complement. In Caulobacter crescentus MipZ, an essential protein, coordinates and regulates the assembly of the FtsZ cytokinetic ring during cell division. MipZ, forms a complex with the partitioning protein ParB near the origin of replication and localizes with the duplicated origin regions to the cell poles. MipZ also directly interferes with FtsZ polymerisation, thereby restricting FtsZ ring formation to mid-cell, the region of lowest MipZ concentration. In eukaryotes members of this entry belong to the Mrp/NBP35 ATP-binding protein family, and specifically the NUBP2/CFD1 subfamily. This includes the cytosolic Fe-S cluster assembly factor Cfd1, which is a component of the cytosolic iron-sulphur (Fe/S) protein assembly machinery. This protein is required for maturation of extra-mitochondrial Fe/S proteins. It may bind and transfer a labile 4Fe-4S cluster to target apoproteins. Cfd1 is also required for biogenesis and export of both ribosomal subunits, suggesting a role in assembly of the Fe/S clusters in RLI1, a protein which performs rRNA processing and ribosome export. ; PDB: 2XIT_B 2XJ4_A 2XJ9_A.
Probab=24.48 E-value=2.2e+02 Score=24.50 Aligned_cols=46 Identities=15% Similarity=0.168 Sum_probs=29.3
Q ss_pred eEEEEcCC--CCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHh
Q 039413 9 HFLLLPFL--APGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVH 54 (363)
Q Consensus 9 ~lv~~p~p--~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~ 54 (363)
|++++... +-|--....+||-+|+..|+.|-++-.+.....+..+.
T Consensus 1 HiIvV~sgKGGvGKSTva~~lA~aLa~~G~kVg~lD~Di~q~S~~r~l 48 (261)
T PF09140_consen 1 HIIVVGSGKGGVGKSTVAVNLAVALARMGKKVGLLDLDIRQPSLPRYL 48 (261)
T ss_dssp EEEEEE-SSTTTTHHHHHHHHHHHHHCTT--EEEEE--TTT-HHHHHH
T ss_pred CEEEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCCCCHHHHH
Confidence 45555533 56777888999999999999999998876554454443
No 251
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=24.43 E-value=1.7e+02 Score=26.59 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=25.0
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.+++|+|.- +.|. --.+|+++|.++||+|+.++-
T Consensus 20 ~~~~IlVtG--gtGf--IG~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 20 EKLRICITG--AGGF--IASHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCEEEEEC--CccH--HHHHHHHHHHhCCCEEEEEEe
Confidence 355677663 4444 457899999999999998863
No 252
>PRK03094 hypothetical protein; Provisional
Probab=24.42 E-value=77 Score=21.69 Aligned_cols=20 Identities=25% Similarity=0.346 Sum_probs=16.4
Q ss_pred HHHHHHHHHhCCCEEEEEeC
Q 039413 24 MFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~ 43 (363)
+..+.++|.++|++|.=+..
T Consensus 10 Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 10 LTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred cHHHHHHHHHCCCEEEecCc
Confidence 45788999999999986654
No 253
>PRK00039 ruvC Holliday junction resolvase; Reviewed
Probab=24.42 E-value=2.1e+02 Score=22.72 Aligned_cols=45 Identities=13% Similarity=0.202 Sum_probs=29.7
Q ss_pred HhchHHHHHHHHhCCCCCcEEEecC-CCc----------cH----HHHHHHcCCCcEEEecc
Q 039413 101 HMLQLPFENLFERQTLKPCCIISDM-CFP----------WT----VDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 101 ~~~~~~~~~ll~~~~~~~d~vI~D~-~~~----------~~----~~vA~~~~iP~v~~~~~ 147 (363)
..+...++++++. .+||.++.|. |+. ++ ...+.+.|+|+.-+.|.
T Consensus 47 ~~I~~~l~~~i~~--~~Pd~vaiE~~f~~~n~~sa~~l~~arGvi~la~~~~~ipv~ey~P~ 106 (164)
T PRK00039 47 KQIYDGLSELIDE--YQPDEVAIEEVFFNKNPQSALKLGQARGVAILAAAQRGLPVAEYTPL 106 (164)
T ss_pred HHHHHHHHHHHHH--hCCCEEEEehhhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 3455678888877 6899998884 333 01 23556778887777654
No 254
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal sighnal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Probab=24.38 E-value=2.1e+02 Score=22.48 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=32.9
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
+++.--|+-|=......++..|+++|.+|.++..+...
T Consensus 3 ~~~~G~~G~GKTt~~~~la~~~~~~g~~v~~i~~D~~~ 40 (173)
T cd03115 3 ILLVGLQGVGKTTTAAKLALYLKKKGKKVLLVAADTYR 40 (173)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEcCCCC
Confidence 46667889999999999999999999999999987554
No 255
>PRK06835 DNA replication protein DnaC; Validated
Probab=24.33 E-value=1.2e+02 Score=27.23 Aligned_cols=39 Identities=21% Similarity=0.119 Sum_probs=32.4
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
..|+++.-+|.|=.--...+|++|.++|+.|.+++....
T Consensus 184 ~~Lll~G~~GtGKThLa~aIa~~l~~~g~~V~y~t~~~l 222 (329)
T PRK06835 184 ENLLFYGNTGTGKTFLSNCIAKELLDRGKSVIYRTADEL 222 (329)
T ss_pred CcEEEECCCCCcHHHHHHHHHHHHHHCCCeEEEEEHHHH
Confidence 468888888887777888999999999999999887543
No 256
>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs. A related protein is found in archaea.
Probab=24.32 E-value=2.4e+02 Score=22.36 Aligned_cols=41 Identities=17% Similarity=-0.025 Sum_probs=34.7
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARF 50 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~ 50 (363)
+++.--|+.|=..-.++++.+.+++|..|.+++++.....+
T Consensus 2 ~li~G~~G~GKT~l~~~~~~~~~~~g~~v~~~s~e~~~~~~ 42 (187)
T cd01124 2 TLLSGGPGTGKTTFALQFLYAGLARGEPGLYVTLEESPEEL 42 (187)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHCCCcEEEEECCCCHHHH
Confidence 46677789999999999999999999999999997665544
No 257
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.04 E-value=1.4e+02 Score=25.40 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCCCcEEEecCCCcc--HH-HHHHHcCCCcEEEecc
Q 039413 105 LPFENLFERQTLKPCCIISDMCFPW--TV-DTAAKFNVPRIIFHEF 147 (363)
Q Consensus 105 ~~~~~ll~~~~~~~d~vI~D~~~~~--~~-~vA~~~~iP~v~~~~~ 147 (363)
..+++++.. +||+||....... .. .+.+..|+|++.+...
T Consensus 65 ~n~E~i~~l---~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~~ 107 (262)
T cd01147 65 PNYEKIAAL---KPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDGG 107 (262)
T ss_pred CCHHHHHhc---CCCEEEEecCCccchhHHHHHHhhCCCEEEEecC
Confidence 456777764 8999998754432 22 3444589999888654
No 258
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=23.98 E-value=1e+02 Score=24.91 Aligned_cols=25 Identities=16% Similarity=0.159 Sum_probs=20.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 24 MFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
...++++|.++|++|.++.|+.-..
T Consensus 15 a~~lir~L~~~g~~V~vv~T~~A~~ 39 (181)
T TIGR00421 15 GIRLLEVLKEAGVEVHLVISDWAKE 39 (181)
T ss_pred HHHHHHHHHHCCCEEEEEECccHHH
Confidence 3789999999999999998865443
No 259
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=23.94 E-value=1.1e+02 Score=27.22 Aligned_cols=40 Identities=15% Similarity=0.082 Sum_probs=35.2
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCCh
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNA 47 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~ 47 (363)
++|+++-..+-|.+.-..++.+.|.++ +.+||+++.....
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~ 42 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFA 42 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHH
Confidence 378999999999999999999999996 8999999976543
No 260
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=23.88 E-value=2.2e+02 Score=19.13 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=25.9
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 11 LLLPFLAPGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 11 v~~p~p~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
++....+-|=..-...++..|+++|++|.++.
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 44455677888888999999999999998765
No 261
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=23.85 E-value=1.4e+02 Score=24.45 Aligned_cols=29 Identities=24% Similarity=0.486 Sum_probs=24.7
Q ss_pred CCcEEEecCCCccHHHHHHHcCCCcEEEe
Q 039413 117 KPCCIISDMCFPWTVDTAAKFNVPRIIFH 145 (363)
Q Consensus 117 ~~d~vI~D~~~~~~~~vA~~~~iP~v~~~ 145 (363)
.+.+||+|---..+..-|+++|+|...+-
T Consensus 29 ~i~~Visd~~~A~~lerA~~~gIpt~~~~ 57 (200)
T COG0299 29 EIVAVISDKADAYALERAAKAGIPTVVLD 57 (200)
T ss_pred EEEEEEeCCCCCHHHHHHHHcCCCEEEec
Confidence 57899999877788999999999986664
No 262
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=23.77 E-value=1.7e+02 Score=27.12 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=28.1
Q ss_pred hHHHHHHHHhCCCCCcEEEecCCCc-------cH---HHHHHHcCCCcEEEe
Q 039413 104 QLPFENLFERQTLKPCCIISDMCFP-------WT---VDTAAKFNVPRIIFH 145 (363)
Q Consensus 104 ~~~~~~ll~~~~~~~d~vI~D~~~~-------~~---~~vA~~~~iP~v~~~ 145 (363)
...+.++++. .++|++|+-..|. |+ ..+.+++|||.+.-.
T Consensus 65 ~~~i~~mv~k--~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~M 114 (431)
T TIGR01918 65 VARVLEMLKD--KEPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTSM 114 (431)
T ss_pred HHHHHHHHHh--cCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 3455556665 6899999998775 22 246678999987643
No 263
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=23.73 E-value=1.7e+02 Score=27.14 Aligned_cols=40 Identities=8% Similarity=0.088 Sum_probs=28.2
Q ss_pred hHHHHHHHHhCCCCCcEEEecCCCc-------cH---HHHHHHcCCCcEEEe
Q 039413 104 QLPFENLFERQTLKPCCIISDMCFP-------WT---VDTAAKFNVPRIIFH 145 (363)
Q Consensus 104 ~~~~~~ll~~~~~~~d~vI~D~~~~-------~~---~~vA~~~~iP~v~~~ 145 (363)
...+.++++. .++|++|+-..|. |+ ..+.++++||.+.-.
T Consensus 65 ~~~i~~mv~k--~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vtaM 114 (431)
T TIGR01917 65 KAKVLEMIKG--ANPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTAM 114 (431)
T ss_pred HHHHHHHHHh--cCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 3455566665 6899999998775 22 246678999987643
No 264
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=23.65 E-value=1.9e+02 Score=23.67 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=33.6
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
++..|.++.-+++|=....+.++.+.+.+|++|.++=.
T Consensus 21 ~~g~v~v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQF 58 (191)
T PRK05986 21 EKGLLIVHTGNGKGKSTAAFGMALRAVGHGKKVGVVQF 58 (191)
T ss_pred cCCeEEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEE
Confidence 45579999999999999999999999999999998743
No 265
>KOG0332 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=23.57 E-value=1.7e+02 Score=26.79 Aligned_cols=26 Identities=8% Similarity=0.079 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 23 PMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
...-|.++|.++||+|++++..-...
T Consensus 342 ta~~l~~~m~~~Gh~V~~l~G~l~~~ 367 (477)
T KOG0332|consen 342 TAMWLYEEMRAEGHQVSLLHGDLTVE 367 (477)
T ss_pred hHHHHHHHHHhcCceeEEeeccchhH
Confidence 34568899999999999999875543
No 266
>PRK09361 radB DNA repair and recombination protein RadB; Provisional
Probab=23.54 E-value=2e+02 Score=23.86 Aligned_cols=36 Identities=17% Similarity=0.038 Sum_probs=32.3
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
-+.+..-|+.|-..-.++++.+.+.+|..|.|++++
T Consensus 25 i~~i~G~~GsGKT~l~~~la~~~~~~~~~v~yi~~e 60 (225)
T PRK09361 25 ITQIYGPPGSGKTNICLQLAVEAAKNGKKVIYIDTE 60 (225)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 356777889999999999999999999999999998
No 267
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=23.36 E-value=2.3e+02 Score=24.22 Aligned_cols=41 Identities=12% Similarity=0.029 Sum_probs=34.2
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCCChhhh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPVNAARF 50 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~~~~~~ 50 (363)
+++...|+.|-..-+++++..++.+ |+.|-+++.+-....+
T Consensus 22 ~vi~a~pg~GKT~~~l~ia~~~a~~~~~~vly~SlEm~~~~l 63 (259)
T PF03796_consen 22 TVIAARPGVGKTAFALQIALNAALNGGYPVLYFSLEMSEEEL 63 (259)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTSSEEEEEESSS-HHHH
T ss_pred EEEEecccCCchHHHHHHHHHHHHhcCCeEEEEcCCCCHHHH
Confidence 5566688999999999999999998 6999999998765543
No 268
>PRK13886 conjugal transfer protein TraL; Provisional
Probab=23.23 E-value=2.5e+02 Score=23.96 Aligned_cols=41 Identities=20% Similarity=0.085 Sum_probs=32.7
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
.|++.-.-.+-|=......|+..|+++|.+|.++-+++...
T Consensus 4 i~~i~~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D~~n~ 44 (241)
T PRK13886 4 IHMVLQGKGGVGKSFIAATIAQYKASKGQKPLCIDTDPVNA 44 (241)
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHHhCCCCEEEEECCCCCc
Confidence 35555556688888999999999999999999998875543
No 269
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=22.99 E-value=2e+02 Score=24.23 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=23.2
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
..+++++. +.| .--..++++|+++||+|+.++-
T Consensus 17 ~~~ilItG--asG--~iG~~l~~~L~~~g~~V~~~~R 49 (251)
T PLN00141 17 TKTVFVAG--ATG--RTGKRIVEQLLAKGFAVKAGVR 49 (251)
T ss_pred CCeEEEEC--CCc--HHHHHHHHHHHhCCCEEEEEec
Confidence 34566665 333 3457889999999999987753
No 270
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=22.98 E-value=3.1e+02 Score=22.23 Aligned_cols=40 Identities=18% Similarity=0.167 Sum_probs=30.5
Q ss_pred ceEEEEc--CCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 8 SHFLLLP--FLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 8 ~~lv~~p--~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
++++.+. -++-|=......||..|+++|++|.++-.....
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D~~~ 58 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGDMRN 58 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4544444 446788889999999999999999998765443
No 271
>COG0543 UbiB 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=22.91 E-value=1.2e+02 Score=26.04 Aligned_cols=37 Identities=24% Similarity=0.422 Sum_probs=28.2
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCC--CEEEEEeCCCChh
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRG--AIVTIVTTPVNAA 48 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rG--h~VT~~t~~~~~~ 48 (363)
++++. +--=+.|+.+++++|.++| .+||++.......
T Consensus 110 vllia--gGtG~aPl~~i~~~~~~~~~~~~V~~~~G~~~~~ 148 (252)
T COG0543 110 VLLIA--GGTGIAPLYAIAKELKEKGDANKVTLLYGARTAK 148 (252)
T ss_pred EEEEe--cccCHhHHHHHHHHHHhcCCCceEEEEEeccChh
Confidence 55554 3333679999999999999 9999998765544
No 272
>COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only]
Probab=22.88 E-value=1.1e+02 Score=28.30 Aligned_cols=26 Identities=19% Similarity=0.028 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 20 HMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 20 H~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
|+..|.+++.+|-.+|++|++...+.
T Consensus 51 v~aAMR~Fad~LraeG~~V~Y~~~~~ 76 (505)
T COG3046 51 VFAAMRHFADELRAEGLKVRYERADD 76 (505)
T ss_pred HHHHHHHHHHHHhhCCceeEEEEcCC
Confidence 45689999999999999999998766
No 273
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=22.84 E-value=1.8e+02 Score=23.90 Aligned_cols=33 Identities=21% Similarity=0.144 Sum_probs=22.7
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
-|+++ .-..|-..-+..++++|+++|+.|.+.-
T Consensus 16 ~Vvv~-~d~~G~~~~~~~~ad~lA~~Gy~v~~pD 48 (218)
T PF01738_consen 16 AVVVI-HDIFGLNPNIRDLADRLAEEGYVVLAPD 48 (218)
T ss_dssp EEEEE--BTTBS-HHHHHHHHHHHHTT-EEEEE-
T ss_pred EEEEE-cCCCCCchHHHHHHHHHHhcCCCEEecc
Confidence 34444 4677888889999999999997776543
No 274
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=22.82 E-value=1.1e+02 Score=27.14 Aligned_cols=34 Identities=18% Similarity=0.054 Sum_probs=25.7
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
++++|+++-..+.| .-++..|++.||+||++.-.
T Consensus 4 ~~m~I~IiG~GaiG-----~~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 4 ETPRIGIIGTGAIG-----GFYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred cCcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeC
Confidence 34578888665555 45778899999999999764
No 275
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=22.75 E-value=1.9e+02 Score=21.27 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=26.7
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 15 FLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 15 ~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
+...|+...+...++.+.++|..|..+|....
T Consensus 60 is~sg~~~~~~~~~~~ak~~g~~vi~iT~~~~ 91 (131)
T PF01380_consen 60 ISYSGETRELIELLRFAKERGAPVILITSNSE 91 (131)
T ss_dssp EESSSTTHHHHHHHHHHHHTTSEEEEEESSTT
T ss_pred eeccccchhhhhhhHHHHhcCCeEEEEeCCCC
Confidence 34778889999999999999999988887544
No 276
>PRK06849 hypothetical protein; Provisional
Probab=22.71 E-value=2e+02 Score=26.43 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=25.8
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
+.+|++.. +-....+++++.|.+.||+|+++....
T Consensus 4 ~~~VLI~G----~~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 4 KKTVLITG----ARAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCEEEEeC----CCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 34676664 222357899999999999999987653
No 277
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=22.65 E-value=1.8e+02 Score=23.69 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=23.6
Q ss_pred CCCcEEEe-cC-CCccHHHHHHHcCCCcEEEecc
Q 039413 116 LKPCCIIS-DM-CFPWTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~-D~-~~~~~~~vA~~~~iP~v~~~~~ 147 (363)
.++|+|+. +. -+..+..+|.++|+|.+..--.
T Consensus 49 ~~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~ 82 (189)
T PRK09219 49 EGITKILTIEASGIAPAVMAALALGVPVVFAKKK 82 (189)
T ss_pred CCCCEEEEEccccHHHHHHHHHHHCCCEEEEEEC
Confidence 46899984 33 2356778999999999887543
No 278
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=22.53 E-value=1.3e+02 Score=26.02 Aligned_cols=42 Identities=21% Similarity=0.236 Sum_probs=34.8
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCC--CEEEEEeCCCChhhh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRG--AIVTIVTTPVNAARF 50 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rG--h~VT~~t~~~~~~~~ 50 (363)
+++++-..+-|.++-+.++.++|.++. -+||+++.......+
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~ 44 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLL 44 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHH
Confidence 477888889999999999999999974 889999987554433
No 279
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=22.48 E-value=1.2e+02 Score=22.82 Aligned_cols=39 Identities=28% Similarity=0.472 Sum_probs=25.1
Q ss_pred hHHHHHHHHhCCCCCcEEEecCCCc--cHHHHHHHcCCCcEEE
Q 039413 104 QLPFENLFERQTLKPCCIISDMCFP--WTVDTAAKFNVPRIIF 144 (363)
Q Consensus 104 ~~~~~~ll~~~~~~~d~vI~D~~~~--~~~~vA~~~~iP~v~~ 144 (363)
...+++++.. ..|.+||++-+-. +...+|+++++|....
T Consensus 71 ~~~l~~l~~~--~~P~iIvt~~~~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 71 KERLEKLFSY--NPPCIIVTRGLEPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp CCHHHHHCTT--T-S-EEEETTT---HHHHHHHHHCT--EEEE
T ss_pred HHHHHHHhCC--CCCEEEEECcCCCCHHHHHHHHHhCCcEEEc
Confidence 3567777765 5688888997653 6789999999997654
No 280
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=22.13 E-value=1.5e+02 Score=28.64 Aligned_cols=27 Identities=15% Similarity=0.362 Sum_probs=18.3
Q ss_pred CCCcEEEecCCCccHHHHHHHcCCCcEEEe
Q 039413 116 LKPCCIISDMCFPWTVDTAAKFNVPRIIFH 145 (363)
Q Consensus 116 ~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~ 145 (363)
.++|+||.+. ....+|+++|+|++.++
T Consensus 363 ~~pdliiG~~---~er~~a~~lgip~~~i~ 389 (511)
T TIGR01278 363 LEPELVLGTQ---MERHSAKRLDIPCGVIS 389 (511)
T ss_pred cCCCEEEECh---HHHHHHHHcCCCEEEec
Confidence 4577777765 34567788888876654
No 281
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=22.11 E-value=3.7e+02 Score=22.23 Aligned_cols=57 Identities=12% Similarity=0.031 Sum_probs=37.4
Q ss_pred cCceEEecCccccc-hhHHHHHHhhcCC-ceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCC
Q 039413 212 KTYGTIINTFEELE-SPCIEDYKKAKQE-KVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGS 289 (363)
Q Consensus 212 ~~~~~l~nt~~~le-~~~~~~~~~~~~~-~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS 289 (363)
.++.+=+..-..+- +.++..++..++. +++++|++.. +++.+||+.. ++.+..||
T Consensus 121 Ga~~vKlFPA~~~GG~~yikal~~plp~i~~~ptGGV~~-------------------~N~~~~l~aG----a~~vg~Gs 177 (204)
T TIGR01182 121 GITALKLFPAEVSGGVKMLKALAGPFPQVRFCPTGGINL-------------------ANVRDYLAAP----NVACGGGS 177 (204)
T ss_pred CCCEEEECCchhcCCHHHHHHHhccCCCCcEEecCCCCH-------------------HHHHHHHhCC----CEEEEECh
Confidence 44444333333343 5677777766642 6889998732 5678999883 78999999
Q ss_pred Cc
Q 039413 290 IC 291 (363)
Q Consensus 290 ~~ 291 (363)
..
T Consensus 178 ~L 179 (204)
T TIGR01182 178 WL 179 (204)
T ss_pred hh
Confidence 65
No 282
>PF01316 Arg_repressor: Arginine repressor, DNA binding domain; InterPro: IPR020900 The arginine dihydrolase (AD) pathway is found in many prokaryotes and some primitive eukaryotes, an example of the latter being Giardia lamblia (Giardia intestinalis) []. The three-enzyme anaerobic pathway breaks down L-arginine to form 1 mol of ATP, carbon dioxide and ammonia. In simpler bacteria, the first enzyme, arginine deiminase, can account for up to 10% of total cell protein []. Most prokaryotic arginine deiminase pathways are under the control of a repressor gene, termed ArgR []. This is a negative regulator, and will only release the arginine deiminase operon for expression in the presence of arginine []. The crystal structure of apo-ArgR from Bacillus stearothermophilus has been determined to 2.5A by means of X-ray crystallography []. The protein exists as a hexamer of identical subunits, and is shown to have six DNA-binding domains, clustered around a central oligomeric core when bound to arginine. It predominantly interacts with A.T residues in ARG boxes. This hexameric protein binds DNA at its N terminus to repress arginine biosyntheis or activate arginine catabolism. Some species have several ArgR paralogs. In a neighbour-joining tree, some of these paralogous sequences show long branches and differ significantly from the well-conserved C-terminal region. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0006525 arginine metabolic process; PDB: 1AOY_A 3V4G_A 3LAJ_D 3FHZ_A 3LAP_B 3ERE_D 2P5L_C 1F9N_D 2P5K_A 1B4A_A ....
Probab=22.02 E-value=52 Score=21.85 Aligned_cols=18 Identities=33% Similarity=0.331 Sum_probs=12.0
Q ss_pred HHHHHHHHhCCCEEEEEe
Q 039413 25 FDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 25 l~La~~La~rGh~VT~~t 42 (363)
..|+..|.++|+.||=.|
T Consensus 23 ~eL~~~L~~~Gi~vTQaT 40 (70)
T PF01316_consen 23 EELVELLEEEGIEVTQAT 40 (70)
T ss_dssp HHHHHHHHHTT-T--HHH
T ss_pred HHHHHHHHHcCCCcchhH
Confidence 578999999999988544
No 283
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=22.02 E-value=2.8e+02 Score=21.14 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=27.5
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 11 LLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 11 v~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
++-|.++.|=..-...||+.|+++|++|-++-......
T Consensus 5 v~s~~~g~G~t~~a~~lA~~la~~~~~Vllid~~~~~~ 42 (157)
T PF13614_consen 5 VWSPKGGVGKTTLALNLAAALARKGKKVLLIDFDFFSP 42 (157)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTT-EEEEE--SSS-
T ss_pred EECCCCCCCHHHHHHHHHHHHHhcCCCeEEEECCCCCC
Confidence 34447788888999999999999999988887655443
No 284
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=22.01 E-value=1.2e+02 Score=22.79 Aligned_cols=24 Identities=13% Similarity=0.140 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 23 PMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
......++|.++||.|+++|.-..
T Consensus 28 ~~ie~L~~l~~~G~~IiiaTGR~~ 51 (126)
T TIGR01689 28 AVIEKLRHYKALGFEIVISSSRNM 51 (126)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCc
Confidence 455666777789999999998543
No 285
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.98 E-value=1.8e+02 Score=23.23 Aligned_cols=47 Identities=23% Similarity=0.162 Sum_probs=28.1
Q ss_pred hhccccCC--CCCCcEEEEecCCCcC---CCh----hHHHHHHHHHhh--CCCCeEEE
Q 039413 269 ECLTWLDS--QQPTSVVYVCLGSICN---LPS----SQLIELGLGLEA--SNKPFVWV 315 (363)
Q Consensus 269 ~~~~wLd~--~~~~sVIyvsfGS~~~---l~~----~~~~~~~~~l~~--~~~~flW~ 315 (363)
++.+++++ ..+..+|.|.+|++-. .+. +.++++++.+.+ .+.+++|.
T Consensus 55 ~~~~~l~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~i~~~~~~~~iiv~ 112 (191)
T cd01836 55 DLLRQLAPLPETRFDVAVISIGVNDVTHLTSIARWRKQLAELVDALRAKFPGARVVVT 112 (191)
T ss_pred HHHHHHHhcccCCCCEEEEEecccCcCCCCCHHHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence 34445442 2233499999999753 222 445666666665 45678885
No 286
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=21.91 E-value=3.5e+02 Score=22.03 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=26.3
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
|+++..++.-|---+..++++|++.|.+|.++.-
T Consensus 111 vi~v~S~~~~d~~~i~~~~~~lkk~~I~v~vI~~ 144 (187)
T cd01452 111 VAFVGSPIEEDEKDLVKLAKRLKKNNVSVDIINF 144 (187)
T ss_pred EEEEecCCcCCHHHHHHHHHHHHHcCCeEEEEEe
Confidence 7777777777766677888888888888887764
No 287
>PRK12828 short chain dehydrogenase; Provisional
Probab=21.85 E-value=2.4e+02 Score=23.15 Aligned_cols=31 Identities=29% Similarity=0.232 Sum_probs=22.0
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.+++. .+.|.+ -..++++|+++|++|.+++.
T Consensus 9 ~vlIt--Gatg~i--G~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAIT--GGFGGL--GRATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEE--CCCCcH--hHHHHHHHHHCCCeEEEEeC
Confidence 44443 344544 58899999999999877764
No 288
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase. This model describes enzymes that perform as 2-dehydropantoate 2-reductase, one of four enzymes required for the de novo biosynthesis of pantothenate (vitamin B5) from Asp and 2-oxoisovalerate. Although few members of the seed alignment are characterized experimentally, nearly all from complete genomes are found in a genome-wide (but not local) context of all three other pantothenate-biosynthetic enzymes (TIGR00222, TIGR00018, TIGR00223). The gene encoding this enzyme is designated apbA in Salmonella typhimurium and panE in Escherichia coli; this protein functions as a monomer and functions in the alternative pyrimidine biosynthetic, or APB, pathway, used to synthesize the pyrimidine moiety of thiamine. Note, synthesis of the pyrimidine moiety of thiamine occurs either via the first five steps in de novo purine biosynthesis, which uses the pur gene products, or through the APB pathway. Note that this family includes both NADH and NADPH
Probab=21.81 E-value=75 Score=27.64 Aligned_cols=19 Identities=26% Similarity=0.223 Sum_probs=16.2
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 039413 26 DTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 26 ~La~~La~rGh~VT~~t~~ 44 (363)
-++..|++.||+||++.-.
T Consensus 5 ~~a~~L~~~G~~V~l~~r~ 23 (293)
T TIGR00745 5 LYGAYLARAGHDVTLLARG 23 (293)
T ss_pred HHHHHHHhCCCcEEEEecH
Confidence 4788899999999999863
No 289
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=21.65 E-value=1.7e+02 Score=27.51 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=23.6
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+++++ +-|+ ..+ .+|+.|+++|++||++...
T Consensus 7 ~v~ii---G~g~-~G~-~~A~~l~~~G~~V~~~d~~ 37 (450)
T PRK14106 7 KVLVV---GAGV-SGL-ALAKFLKKLGAKVILTDEK 37 (450)
T ss_pred EEEEE---CCCH-HHH-HHHHHHHHCCCEEEEEeCC
Confidence 55555 4555 444 9999999999999988654
No 290
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=21.62 E-value=1.8e+02 Score=21.58 Aligned_cols=36 Identities=8% Similarity=-0.007 Sum_probs=25.8
Q ss_pred cEEEEecCCCcCCChhHHHHHHHHHhhC-C-CCeEEEE
Q 039413 281 SVVYVCLGSICNLPSSQLIELGLGLEAS-N-KPFVWVI 316 (363)
Q Consensus 281 sVIyvsfGS~~~l~~~~~~~~~~~l~~~-~-~~flW~~ 316 (363)
++|+++.||-..-..+.+.+++..+++. + .+|-|.+
T Consensus 3 ~lvlv~hGS~~~~~~~~~~~~~~~l~~~~~~~~v~~af 40 (126)
T PRK00923 3 GLLLVGHGSRLPYNKEVVTKIAEKIKEKHPFYIVEVGF 40 (126)
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 5899999997644557788888888763 2 3566663
No 291
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.53 E-value=2.9e+02 Score=23.80 Aligned_cols=33 Identities=6% Similarity=0.026 Sum_probs=25.5
Q ss_pred CCCcEEEecCCCc--cHHHHHHHcCCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~~iP~v~~~~~~ 148 (363)
.+..||+++.... .+-.+|+..|++.+.+.+.+
T Consensus 216 ~~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~~~ 250 (266)
T cd01018 216 KGVRVVFVQPQFSTKSAEAIAREIGAKVVTIDPLA 250 (266)
T ss_pred cCCCEEEEcCCCCcHHHHHHHHHcCCeEEEeCCcH
Confidence 5788999997665 34578899999988876654
No 292
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=21.41 E-value=89 Score=27.76 Aligned_cols=21 Identities=38% Similarity=0.390 Sum_probs=17.8
Q ss_pred HHHHHHHHHhCCCEEEEEeCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~ 44 (363)
-+..|.+|+++|++||++-..
T Consensus 11 G~~~A~~La~~G~~V~l~e~~ 31 (358)
T PF01266_consen 11 GLSTAYELARRGHSVTLLERG 31 (358)
T ss_dssp HHHHHHHHHHTTSEEEEEESS
T ss_pred HHHHHHHHHHCCCeEEEEeec
Confidence 356789999999999999764
No 293
>cd01916 ACS_1 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA. ACS forms a heterotetramer with carbon monoxide dehydrogenase (CODH) consisting of two ACS and two CODH subunits. CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP). ACS has three structural domains, an N-terminal rossman fold domain with a helical region at its N-terminus which interacts with CODH, and two alpha + beta fold domains. A Ni-Fe-S center referred to as the A-cluster is located in the C-terminal domain. A large cavity exists between the three domains which may bind CoA.
Probab=21.35 E-value=1.4e+02 Score=30.05 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=26.5
Q ss_pred CCCcEEEecCCC--ccHHHHHHHcCCCcEEEecc
Q 039413 116 LKPCCIISDMCF--PWTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~D~~~--~~~~~vA~~~~iP~v~~~~~ 147 (363)
.-+|+||+|.-+ +....+|+++|.+.|.+++-
T Consensus 264 G~~D~~vvD~qCi~~~I~eiA~kyG~g~I~tt~r 297 (731)
T cd01916 264 GIADVVVVDEQCIRADILEEAQKLGIPVIATNDK 297 (731)
T ss_pred CCCcEEEEecccCcccHHHHHHHhCCCEEEechh
Confidence 569999999543 56689999999999998764
No 294
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=21.34 E-value=2.5e+02 Score=26.43 Aligned_cols=40 Identities=18% Similarity=0.291 Sum_probs=34.8
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
..++++..++-|=..-...||..|.++|++|.+++.+...
T Consensus 96 ~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~D~~R 135 (437)
T PRK00771 96 QTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAADTYR 135 (437)
T ss_pred eEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecCCCCC
Confidence 3577788889999999999999999999999999887553
No 295
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=21.24 E-value=2.4e+02 Score=23.92 Aligned_cols=29 Identities=14% Similarity=0.221 Sum_probs=26.0
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCE
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAI 37 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~ 37 (363)
-||+...|..|--.-..+|.++|.+||+.
T Consensus 3 LVvi~G~P~SGKstrA~~L~~~l~~~~~K 31 (281)
T KOG3062|consen 3 LVVICGLPCSGKSTRAVELREALKERGTK 31 (281)
T ss_pred eEEEeCCCCCCchhHHHHHHHHHHhhccc
Confidence 46777799999999999999999999985
No 296
>PF09001 DUF1890: Domain of unknown function (DUF1890); InterPro: IPR012033 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. The structure of the Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) protein has been determined but no evidence as to the function is available yet.; PDB: 1KJN_B.
Probab=21.22 E-value=79 Score=24.11 Aligned_cols=27 Identities=15% Similarity=0.158 Sum_probs=20.9
Q ss_pred CCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 19 GHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 19 gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
..+-..+-++..|-++||+||+..++.
T Consensus 11 vq~p~alYl~~~Lk~~G~~v~Va~npA 37 (139)
T PF09001_consen 11 VQTPSALYLSYKLKKKGFEVVVAGNPA 37 (139)
T ss_dssp THHHHHHHHHHHHHCTTEEEEEEE-HH
T ss_pred chhHHHHHHHHHHHhcCCeEEEecCHH
Confidence 445567788899999999999988753
No 297
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=21.21 E-value=2.2e+02 Score=24.51 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
++.|++++-.+.+.. -+..++..|.++|++|..+.-
T Consensus 18 ~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl 53 (273)
T PLN02211 18 PPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDL 53 (273)
T ss_pred CCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecc
Confidence 457888886555443 467888889999998876644
No 298
>PRK05541 adenylylsulfate kinase; Provisional
Probab=21.04 E-value=2.8e+02 Score=21.87 Aligned_cols=42 Identities=10% Similarity=-0.007 Sum_probs=33.6
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
|.+.....-|++.-.++.|=......|+++|..+|..+.++.
T Consensus 1 ~~~~~~~~~I~i~G~~GsGKst~a~~l~~~l~~~~~~~~~~~ 42 (176)
T PRK05541 1 MQMKPNGYVIWITGLAGSGKTTIAKALYERLKLKYSNVIYLD 42 (176)
T ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEe
Confidence 666555667888889999998888999999988887777764
No 299
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=20.94 E-value=1.1e+02 Score=25.35 Aligned_cols=23 Identities=26% Similarity=0.030 Sum_probs=18.9
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCC
Q 039413 24 MFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~~~~ 46 (363)
-..|+++|+..||+|++.+....
T Consensus 13 G~alA~~~a~ag~eV~igs~r~~ 35 (211)
T COG2085 13 GSALALRLAKAGHEVIIGSSRGP 35 (211)
T ss_pred HHHHHHHHHhCCCeEEEecCCCh
Confidence 46789999999999999876443
No 300
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif. They are found associated with IS21 family insertion sequences []. Functionally they have not been characterised, but they may be involved in transposition [].; GO: 0005524 ATP binding; PDB: 3EC2_A 3ECC_A 2W58_A 2QGZ_A.
Probab=20.92 E-value=2.3e+02 Score=22.66 Aligned_cols=38 Identities=16% Similarity=0.152 Sum_probs=29.2
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
...++++.-++.|=.--...+++++.++|+.|-|++..
T Consensus 47 ~~~l~l~G~~G~GKThLa~ai~~~~~~~g~~v~f~~~~ 84 (178)
T PF01695_consen 47 GENLILYGPPGTGKTHLAVAIANEAIRKGYSVLFITAS 84 (178)
T ss_dssp --EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEHH
T ss_pred CeEEEEEhhHhHHHHHHHHHHHHHhccCCcceeEeecC
Confidence 44688888888887777889999999999999998764
No 301
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=20.89 E-value=1.7e+02 Score=21.32 Aligned_cols=38 Identities=18% Similarity=0.185 Sum_probs=24.0
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCC-EEEEEeC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGA-IVTIVTT 43 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh-~VT~~t~ 43 (363)
.++.++.+......|......++++|.+++. ++.++..
T Consensus 49 ~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vG 87 (119)
T cd02067 49 EDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVG 87 (119)
T ss_pred cCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEE
Confidence 3456666666666677777777777776665 5655443
No 302
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=20.88 E-value=1.3e+02 Score=24.94 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=22.9
Q ss_pred CCcEEE-ecCCCc-cHHHHHHHcCCCcEEEeccc
Q 039413 117 KPCCII-SDMCFP-WTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 117 ~~d~vI-~D~~~~-~~~~vA~~~~iP~v~~~~~~ 148 (363)
.||+|| +|.--. -+..-|.++|||.|++.-+.
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn 147 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTD 147 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCC
Confidence 467655 776543 45677889999999997553
No 303
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=20.76 E-value=97 Score=26.50 Aligned_cols=33 Identities=30% Similarity=0.220 Sum_probs=24.4
Q ss_pred ceEEEEcCCCC--CCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 8 SHFLLLPFLAP--GHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~--gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.+|+++.-++- |. -+.+|+.|+++|++|+++..
T Consensus 61 ~~V~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 95 (246)
T PLN03050 61 PRVLLVCGPGNNGGD---GLVAARHLAHFGYEVTVCYP 95 (246)
T ss_pred CeEEEEECCCCCchh---HHHHHHHHHHCCCeEEEEEc
Confidence 46888875542 22 35678999999999999874
No 304
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=20.70 E-value=1.8e+02 Score=24.87 Aligned_cols=37 Identities=24% Similarity=0.122 Sum_probs=31.7
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 10 FLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 10 lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
+++..-++.|-......++..++++|++|-++.++..
T Consensus 3 ~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~ 39 (254)
T cd00550 3 IFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPA 39 (254)
T ss_pred EEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCc
Confidence 3445567889999999999999999999999998764
No 305
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=20.65 E-value=97 Score=22.61 Aligned_cols=37 Identities=19% Similarity=0.106 Sum_probs=27.1
Q ss_pred cEEEEecCCCcCCChhHHHHHHHHHhh-CC-CCeEEEEe
Q 039413 281 SVVYVCLGSICNLPSSQLIELGLGLEA-SN-KPFVWVIR 317 (363)
Q Consensus 281 sVIyvsfGS~~~l~~~~~~~~~~~l~~-~~-~~flW~~~ 317 (363)
++|.++.||-..-..+.+++++..+++ .+ .+|-+.+-
T Consensus 2 a~llv~HGS~~~~~~~~~~~l~~~l~~~~~~~~v~~afl 40 (117)
T cd03414 2 AVVLVGRGSSDPDANADVAKIARLLEEGTGFARVETAFA 40 (117)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 589999999765556789999999975 44 35655543
No 306
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=20.63 E-value=2.5e+02 Score=23.73 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=29.6
Q ss_pred eEEEEcCC--CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPFL--APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p--~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
++++++.. +-|-...--.|+..||.+|+.|.++-.+
T Consensus 3 ~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~D 40 (272)
T COG2894 3 RIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFD 40 (272)
T ss_pred eEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecC
Confidence 45566544 5688889999999999999999999775
No 307
>PF14626 RNase_Zc3h12a_2: Zc3h12a-like Ribonuclease NYN domain
Probab=20.51 E-value=1e+02 Score=22.83 Aligned_cols=25 Identities=8% Similarity=0.050 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 22 IPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 22 ~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
.++..+.-...-|||.+|++-+...
T Consensus 10 k~L~eIll~FilrGHKT~vyLP~yY 34 (122)
T PF14626_consen 10 KALVEILLHFILRGHKTVVYLPKYY 34 (122)
T ss_pred HHHHHHHHHHHhccCeeEEEChHHH
Confidence 3555566666779999999987543
No 308
>TIGR00234 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA synthetase model starts picking up tryptophanyl-tRNA synthetases at scores of 0 and below. The proteins found by this model have a deep split between two groups. One group contains bacterial and organellar eukaryotic examples. The other contains archaeal and cytosolic eukaryotic examples.
Probab=20.48 E-value=1e+02 Score=28.34 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=24.9
Q ss_pred EEEEcCC---CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 10 FLLLPFL---APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 10 lv~~p~p---~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+.+=|+. .-||+.|++.+ +.|.+.||+++++...
T Consensus 35 ~G~dPTg~~lHlGh~v~l~~l-~~lq~~G~~~~iligd 71 (377)
T TIGR00234 35 VGFDPTAPSLHLGHLVPLLKL-RDFQQAGHEVIVLLGD 71 (377)
T ss_pred EeeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEec
Confidence 3444544 24999997665 6889999999988764
No 309
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=20.38 E-value=1.8e+02 Score=28.16 Aligned_cols=27 Identities=11% Similarity=0.301 Sum_probs=16.7
Q ss_pred CCCcEEEecCCCccHHHHHHHcCCCcEEEe
Q 039413 116 LKPCCIISDMCFPWTVDTAAKFNVPRIIFH 145 (363)
Q Consensus 116 ~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~ 145 (363)
.++|+||.+. ....+|+++|+|++.++
T Consensus 361 ~~PdliiG~~---~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 361 AAPELVLGTQ---MERHSAKRLGIPCAVIS 387 (519)
T ss_pred cCCCEEEEcc---hHHHHHHHcCCCEEEec
Confidence 3577776554 33457777777766553
No 310
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=20.33 E-value=51 Score=25.47 Aligned_cols=40 Identities=28% Similarity=0.262 Sum_probs=30.1
Q ss_pred cEEEEecCCCcCCChhHHHHHHHHHhh-----CCCCeEEEEeCCc
Q 039413 281 SVVYVCLGSICNLPSSQLIELGLGLEA-----SNKPFVWVIRGES 320 (363)
Q Consensus 281 sVIyvsfGS~~~l~~~~~~~~~~~l~~-----~~~~flW~~~~~~ 320 (363)
.|++|+=|+-.+..-..+++++....+ ....|+|.+|...
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~~ 47 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDAD 47 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-TT
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCchh
Confidence 589999999887777778888888772 2348999999764
No 311
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=20.27 E-value=1.9e+02 Score=26.56 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=26.8
Q ss_pred ceEEEEcC-CCCCCHHHHHHHHHHHHhCCC---EEEEEe
Q 039413 8 SHFLLLPF-LAPGHMIPMFDTARLLAQRGA---IVTIVT 42 (363)
Q Consensus 8 ~~lv~~p~-p~~gH~~p~l~La~~La~rGh---~VT~~t 42 (363)
++|++++. -+.||.....+|.++|.++|. +|.++-
T Consensus 6 ~~vlil~~~~G~GH~~aA~al~~~~~~~~~~~~~~~~~D 44 (391)
T PRK13608 6 KKILIITGSFGNGHMQVTQSIVNQLNDMNLDHLSVIEHD 44 (391)
T ss_pred ceEEEEECCCCchHHHHHHHHHHHHHhhCCCCceEEEee
Confidence 36777774 478999999999999998864 466553
No 312
>PRK00784 cobyric acid synthase; Provisional
Probab=20.13 E-value=1.6e+02 Score=28.10 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=27.7
Q ss_pred eEEEEcC-CCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPF-LAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~-p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.+++... ..-|=......|++.|.++|++|..+-+
T Consensus 4 ~ifItGT~T~vGKT~vt~~L~~~l~~~G~~v~~~Kp 39 (488)
T PRK00784 4 ALMVQGTASDAGKSTLVAGLCRILARRGYRVAPFKA 39 (488)
T ss_pred eEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEecccc
Confidence 4555544 4578899999999999999999987654
No 313
>PRK07236 hypothetical protein; Provisional
Probab=20.11 E-value=2.1e+02 Score=26.07 Aligned_cols=37 Identities=19% Similarity=0.103 Sum_probs=27.5
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
|+. +...+|+|+--. .--+.+|..|+++|++||++=-
T Consensus 1 ~~~-~~~~~ViIVGaG-----~aGl~~A~~L~~~G~~v~v~E~ 37 (386)
T PRK07236 1 MTH-MSGPRAVVIGGS-----LGGLFAALLLRRAGWDVDVFER 37 (386)
T ss_pred CCC-CCCCeEEEECCC-----HHHHHHHHHHHhCCCCEEEEec
Confidence 443 345688887643 5568899999999999999853
No 314
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=20.05 E-value=1.6e+02 Score=23.35 Aligned_cols=40 Identities=5% Similarity=0.106 Sum_probs=26.3
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC-ChhhhHHH
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV-NAARFKTV 53 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~-~~~~~~~~ 53 (363)
+++++. +-|.+. +|+.+|-++|.+|+++..+. ....+.+.
T Consensus 108 ~~vLvS--gD~DF~---~Lv~~lre~G~~V~v~g~~~~ts~~L~~a 148 (160)
T TIGR00288 108 AVALVT--RDADFL---PVINKAKENGKETIVIGAEPGFSTALQNS 148 (160)
T ss_pred EEEEEe--ccHhHH---HHHHHHHHCCCEEEEEeCCCCChHHHHHh
Confidence 344444 666655 56778889999999998654 33344443
No 315
>CHL00194 ycf39 Ycf39; Provisional
Probab=20.02 E-value=1.1e+02 Score=27.19 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=22.2
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+|+++ .+.|. --.+|+++|.++||+|+.++-
T Consensus 2 kIlVt--GatG~--iG~~lv~~Ll~~g~~V~~l~R 32 (317)
T CHL00194 2 SLLVI--GATGT--LGRQIVRQALDEGYQVRCLVR 32 (317)
T ss_pred EEEEE--CCCcH--HHHHHHHHHHHCCCeEEEEEc
Confidence 34443 34553 456789999999999998874
Done!