Query 039413
Match_columns 363
No_of_seqs 237 out of 1322
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 16:03:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039413.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039413hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 8.8E-57 3E-61 413.3 27.4 329 6-363 12-349 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 8.5E-49 2.9E-53 366.1 31.3 337 1-363 1-361 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.3E-49 4.4E-54 372.8 24.3 349 1-363 1-375 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 8.6E-48 2.9E-52 357.1 27.5 335 1-363 1-347 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.4E-48 1.5E-52 359.9 24.6 333 6-363 8-354 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.6E-27 5.3E-32 220.4 24.0 297 6-360 11-324 (424)
7 1iir_A Glycosyltransferase GTF 99.9 2.2E-24 7.7E-29 198.6 18.4 275 8-362 1-304 (415)
8 4amg_A Snogd; transferase, pol 99.9 2.3E-24 7.8E-29 197.6 17.2 275 6-360 21-307 (400)
9 2iyf_A OLED, oleandomycin glyc 99.9 1.4E-22 4.7E-27 187.6 20.2 291 1-360 1-302 (430)
10 1rrv_A Glycosyltransferase GTF 99.9 4.1E-23 1.4E-27 190.3 15.6 273 8-357 1-302 (416)
11 3rsc_A CALG2; TDP, enediyne, s 99.9 4.1E-20 1.4E-24 170.1 20.5 285 5-360 18-316 (415)
12 3ia7_A CALG4; glycosysltransfe 99.8 1.2E-19 4E-24 166.3 22.2 281 7-360 4-300 (402)
13 3h4t_A Glycosyltransferase GTF 99.8 1.1E-18 3.7E-23 159.9 18.7 277 8-359 1-286 (404)
14 2p6p_A Glycosyl transferase; X 99.8 5.1E-18 1.7E-22 154.5 18.0 257 8-359 1-281 (384)
15 2yjn_A ERYCIII, glycosyltransf 99.8 9.9E-18 3.4E-22 155.4 14.8 282 6-359 19-337 (441)
16 3oti_A CALG3; calicheamicin, T 99.7 9.6E-16 3.3E-20 140.1 15.3 270 6-360 19-302 (398)
17 4fzr_A SSFS6; structural genom 99.6 2.6E-15 8.7E-20 137.3 13.8 273 5-360 13-303 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.5 1.9E-13 6.6E-18 124.4 15.6 265 7-359 1-288 (391)
19 3otg_A CALG1; calicheamicin, T 99.5 9.6E-13 3.3E-17 120.6 20.0 275 5-360 18-311 (412)
20 2o6l_A UDP-glucuronosyltransfe 98.9 1E-09 3.5E-14 87.4 4.5 83 266-363 7-90 (170)
21 3s2u_A UDP-N-acetylglucosamine 98.3 3.9E-06 1.3E-10 75.2 10.7 114 9-144 4-121 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 97.5 0.001 3.6E-08 59.0 11.7 118 8-145 7-126 (364)
23 3fro_A GLGA glycogen synthase; 95.8 0.13 4.5E-06 46.3 12.9 38 7-44 2-44 (439)
24 2r60_A Glycosyl transferase, g 95.4 0.037 1.3E-06 51.3 7.7 45 1-45 1-60 (499)
25 3okp_A GDP-mannose-dependent a 93.3 0.51 1.8E-05 41.7 10.2 110 6-147 3-118 (394)
26 1v4v_A UDP-N-acetylglucosamine 91.4 0.94 3.2E-05 39.9 9.3 37 8-45 6-43 (376)
27 2jjm_A Glycosyl transferase, g 90.0 1.7 6E-05 38.4 9.9 39 7-45 15-54 (394)
28 1vgv_A UDP-N-acetylglucosamine 87.7 2.2 7.6E-05 37.5 8.8 35 9-44 2-37 (384)
29 3c48_A Predicted glycosyltrans 87.3 0.68 2.3E-05 41.7 5.3 40 6-45 19-69 (438)
30 2iuy_A Avigt4, glycosyltransfe 86.3 0.78 2.7E-05 39.8 4.9 28 18-45 30-57 (342)
31 3s28_A Sucrose synthase 1; gly 85.1 1.4 4.8E-05 43.4 6.4 39 106-144 396-436 (816)
32 2wqk_A 5'-nucleotidase SURE; S 84.8 0.93 3.2E-05 37.6 4.3 38 9-48 3-40 (251)
33 3vue_A GBSS-I, granule-bound s 84.2 1.2 4.2E-05 41.6 5.4 41 5-45 7-53 (536)
34 3beo_A UDP-N-acetylglucosamine 83.5 6.9 0.00024 34.0 9.9 39 7-46 8-48 (375)
35 2x0d_A WSAF; GT4 family, trans 83.3 0.86 2.9E-05 41.0 3.8 41 5-45 44-89 (413)
36 3ot5_A UDP-N-acetylglucosamine 82.2 5.1 0.00017 35.8 8.5 38 6-44 26-65 (403)
37 3dzc_A UDP-N-acetylglucosamine 81.6 6.8 0.00023 34.8 9.1 40 6-46 24-64 (396)
38 4hwg_A UDP-N-acetylglucosamine 81.5 3.4 0.00012 36.7 7.0 108 12-144 13-123 (385)
39 2iw1_A Lipopolysaccharide core 81.2 1.3 4.3E-05 38.8 4.1 36 9-44 2-40 (374)
40 2x6q_A Trehalose-synthase TRET 79.5 2.9 9.9E-05 37.2 6.0 41 6-46 39-81 (416)
41 2gek_A Phosphatidylinositol ma 78.0 2.6 9E-05 37.2 5.2 41 6-46 19-63 (406)
42 2qzs_A Glycogen synthase; glyc 75.4 2.6 8.8E-05 38.5 4.4 37 8-44 1-43 (485)
43 2phj_A 5'-nucleotidase SURE; S 75.3 2.9 9.9E-05 34.5 4.2 39 8-48 2-40 (251)
44 1rzu_A Glycogen synthase 1; gl 75.3 2.8 9.6E-05 38.3 4.7 36 9-44 2-43 (485)
45 3to5_A CHEY homolog; alpha(5)b 70.3 9.6 0.00033 27.9 5.7 35 116-150 56-99 (134)
46 1ccw_A Protein (glutamate muta 66.5 10 0.00036 27.9 5.2 38 7-44 3-40 (137)
47 1psw_A ADP-heptose LPS heptosy 65.4 21 0.00073 30.6 8.0 40 9-48 2-43 (348)
48 1id1_A Putative potassium chan 63.7 9.3 0.00032 28.5 4.6 33 7-44 3-35 (153)
49 1kjn_A MTH0777; hypotethical p 63.0 11 0.00038 28.0 4.5 45 1-45 1-46 (157)
50 3hbm_A UDP-sugar hydrolase; PS 62.6 11 0.00037 31.8 5.2 25 17-45 14-38 (282)
51 2lpm_A Two-component response 61.6 10 0.00035 27.3 4.3 31 116-146 52-87 (123)
52 4dzz_A Plasmid partitioning pr 61.4 54 0.0018 25.3 9.6 33 15-47 10-42 (206)
53 3tov_A Glycosyl transferase fa 61.3 30 0.001 30.0 8.0 44 6-49 7-52 (349)
54 1g5t_A COB(I)alamin adenosyltr 60.7 59 0.002 25.5 11.2 40 6-45 27-66 (196)
55 2yxb_A Coenzyme B12-dependent 60.2 9.2 0.00032 29.1 4.0 39 6-44 17-55 (161)
56 1y80_A Predicted cobalamin bin 59.1 19 0.00065 28.6 5.9 44 6-49 87-130 (210)
57 2i2x_B MTAC, methyltransferase 57.8 17 0.00059 30.0 5.6 39 6-44 122-160 (258)
58 3bfv_A CAPA1, CAPB2, membrane 57.1 53 0.0018 27.2 8.6 41 7-47 81-123 (271)
59 1mvl_A PPC decarboxylase athal 53.9 18 0.0006 28.9 4.8 38 7-46 19-56 (209)
60 3ip0_A 2-amino-4-hydroxy-6-hyd 53.8 13 0.00044 28.2 3.7 28 282-309 2-29 (158)
61 4gyw_A UDP-N-acetylglucosamine 53.7 24 0.0008 34.3 6.6 43 278-320 520-562 (723)
62 3gl9_A Response regulator; bet 51.6 28 0.00096 24.2 5.3 34 116-149 45-87 (122)
63 2qx0_A 7,8-dihydro-6-hydroxyme 50.9 11 0.00037 28.6 2.9 28 282-309 3-30 (159)
64 3vot_A L-amino acid ligase, BL 50.5 44 0.0015 29.7 7.5 33 107-141 67-101 (425)
65 4b4o_A Epimerase family protei 50.2 11 0.00037 31.7 3.3 32 9-44 2-33 (298)
66 3zqu_A Probable aromatic acid 49.7 29 0.001 27.6 5.4 37 8-45 5-41 (209)
67 3ezx_A MMCP 1, monomethylamine 49.6 24 0.00081 28.3 5.0 44 6-49 91-134 (215)
68 2w36_A Endonuclease V; hypoxan 49.6 13 0.00043 30.1 3.2 42 105-146 91-139 (225)
69 2hy7_A Glucuronosyltransferase 49.5 13 0.00045 33.0 3.8 37 6-44 13-52 (406)
70 3mc3_A DSRE/DSRF-like family p 47.7 33 0.0011 25.0 5.1 36 9-44 17-55 (134)
71 3q3e_A HMW1C-like glycosyltran 47.3 39 0.0013 31.9 6.7 71 280-355 440-513 (631)
72 1f9y_A HPPK, protein (6-hydrox 46.9 19 0.00066 27.2 3.7 28 282-309 2-29 (158)
73 1lss_A TRK system potassium up 46.1 29 0.001 24.8 4.8 32 7-43 4-35 (140)
74 2r8r_A Sensor protein; KDPD, P 46.0 38 0.0013 27.4 5.6 41 6-46 5-45 (228)
75 2jzc_A UDP-N-acetylglucosamine 45.7 25 0.00085 28.4 4.5 40 279-319 27-72 (224)
76 3t6k_A Response regulator rece 44.7 46 0.0016 23.6 5.7 33 116-148 47-88 (136)
77 1p3y_1 MRSD protein; flavoprot 44.2 22 0.00074 28.0 3.8 38 7-45 8-45 (194)
78 3f6p_A Transcriptional regulat 44.1 37 0.0013 23.4 4.9 33 116-148 45-83 (120)
79 3m6m_D Sensory/regulatory prot 44.0 36 0.0012 24.5 5.0 33 116-148 57-100 (143)
80 2g1u_A Hypothetical protein TM 43.8 22 0.00077 26.4 3.8 35 5-44 17-51 (155)
81 2gk4_A Conserved hypothetical 43.7 19 0.00066 29.2 3.5 22 23-44 31-52 (232)
82 1cbk_A Protein (7,8-dihydro-6- 43.5 21 0.00072 27.1 3.5 28 282-309 3-30 (160)
83 3qjg_A Epidermin biosynthesis 43.2 34 0.0012 26.4 4.7 38 9-47 7-44 (175)
84 3qbc_A 2-amino-4-hydroxy-6-hyd 43.0 21 0.00072 27.1 3.4 28 282-309 6-33 (161)
85 3qxc_A Dethiobiotin synthetase 42.4 29 0.001 28.3 4.5 33 10-42 24-57 (242)
86 3goc_A Endonuclease V; alpha-b 41.0 44 0.0015 27.1 5.2 42 105-146 95-143 (237)
87 3llv_A Exopolyphosphatase-rela 39.9 30 0.001 25.0 4.0 32 7-43 6-37 (141)
88 1sbz_A Probable aromatic acid 39.6 45 0.0015 26.3 5.0 37 9-46 2-39 (197)
89 3h1g_A Chemotaxis protein CHEY 39.4 66 0.0023 22.3 5.8 33 116-148 50-91 (129)
90 3e2i_A Thymidine kinase; Zn-bi 39.3 1.2E+02 0.0042 24.2 7.5 36 9-44 29-65 (219)
91 3lqk_A Dipicolinate synthase s 39.2 37 0.0012 26.9 4.4 37 8-45 8-45 (201)
92 3ty2_A 5'-nucleotidase SURE; s 39.0 43 0.0015 27.7 4.9 42 5-48 9-50 (261)
93 2qs7_A Uncharacterized protein 38.0 40 0.0014 24.9 4.3 34 11-44 12-45 (144)
94 3lyu_A Putative hydrogenase; t 37.6 31 0.0011 25.3 3.7 36 8-46 19-54 (142)
95 3kkj_A Amine oxidase, flavin-c 37.0 19 0.00065 29.1 2.7 18 24-41 14-31 (336)
96 2llz_A Uncharacterized protein 36.1 20 0.00068 24.4 2.0 23 286-308 56-78 (100)
97 2xvy_A Chelatase, putative; me 35.7 49 0.0017 27.3 5.0 39 280-318 10-50 (269)
98 3c3m_A Response regulator rece 35.0 79 0.0027 22.3 5.6 33 116-148 46-87 (138)
99 3gpi_A NAD-dependent epimerase 34.6 52 0.0018 27.1 5.1 31 8-43 4-34 (286)
100 2ejb_A Probable aromatic acid 34.5 67 0.0023 25.0 5.2 36 9-45 3-38 (189)
101 3fgn_A Dethiobiotin synthetase 34.4 65 0.0022 26.4 5.5 122 10-148 29-167 (251)
102 3mcu_A Dipicolinate synthase, 33.8 49 0.0017 26.3 4.4 36 9-45 7-43 (207)
103 3eag_A UDP-N-acetylmuramate:L- 33.7 38 0.0013 29.0 4.1 33 7-43 4-36 (326)
104 3oy2_A Glycosyltransferase B73 33.0 38 0.0013 29.7 4.2 36 9-45 2-40 (413)
105 1p9o_A Phosphopantothenoylcyst 32.6 27 0.00092 29.8 2.9 23 23-45 67-89 (313)
106 2f9f_A First mannosyl transfer 32.5 1.2E+02 0.004 22.7 6.5 32 283-316 25-57 (177)
107 3gt7_A Sensor protein; structu 32.2 80 0.0027 22.9 5.3 33 116-148 50-91 (154)
108 2r6j_A Eugenol synthase 1; phe 31.9 59 0.002 27.3 5.0 33 9-45 13-45 (318)
109 3lrx_A Putative hydrogenase; a 31.7 29 0.00098 26.1 2.7 37 8-47 24-60 (158)
110 3ew7_A LMO0794 protein; Q8Y8U8 31.3 34 0.0012 26.8 3.3 20 24-43 13-32 (221)
111 1zgz_A Torcad operon transcrip 31.0 93 0.0032 21.1 5.3 33 116-148 45-83 (122)
112 3e8x_A Putative NAD-dependent 31.0 35 0.0012 27.3 3.3 32 8-43 22-53 (236)
113 1dbw_A Transcriptional regulat 31.0 91 0.0031 21.4 5.3 33 116-148 46-85 (126)
114 3ga2_A Endonuclease V; alpha-b 30.6 61 0.0021 26.5 4.5 40 106-145 98-144 (246)
115 3vps_A TUNA, NAD-dependent epi 30.4 49 0.0017 27.7 4.3 39 1-43 1-39 (321)
116 4g6h_A Rotenone-insensitive NA 30.4 26 0.0009 32.2 2.7 35 5-44 40-74 (502)
117 3cg0_A Response regulator rece 30.4 79 0.0027 22.1 5.0 34 116-149 53-93 (140)
118 1u7z_A Coenzyme A biosynthesis 30.2 42 0.0014 27.1 3.5 23 22-44 35-57 (226)
119 3nhm_A Response regulator; pro 30.0 1.2E+02 0.0041 20.9 5.9 32 116-147 46-86 (133)
120 3zzm_A Bifunctional purine bio 29.8 99 0.0034 28.3 6.1 98 8-126 10-111 (523)
121 3a10_A Response regulator; pho 29.5 1.3E+02 0.0043 20.1 5.9 32 116-147 44-82 (116)
122 1jx7_A Hypothetical protein YC 29.4 67 0.0023 22.2 4.2 27 18-44 15-43 (117)
123 3ioy_A Short-chain dehydrogena 29.1 92 0.0032 26.3 5.8 32 9-43 9-40 (319)
124 2hy5_B Intracellular sulfur ox 28.8 71 0.0024 23.3 4.3 35 9-43 8-44 (136)
125 3h2s_A Putative NADH-flavin re 28.7 40 0.0014 26.5 3.3 20 24-43 13-32 (224)
126 2hy5_A Putative sulfurtransfer 28.7 92 0.0032 22.2 4.9 34 10-43 4-40 (130)
127 1tmy_A CHEY protein, TMY; chem 28.6 1.2E+02 0.0042 20.3 5.6 33 117-149 47-86 (120)
128 1dhr_A Dihydropteridine reduct 28.2 97 0.0033 24.7 5.6 32 9-43 8-39 (241)
129 3g0o_A 3-hydroxyisobutyrate de 28.0 30 0.001 29.2 2.4 38 1-43 1-38 (303)
130 4e3z_A Putative oxidoreductase 28.0 2.2E+02 0.0074 23.1 7.8 33 8-43 26-58 (272)
131 1qzu_A Hypothetical protein MD 27.9 56 0.0019 25.9 3.8 39 7-46 19-58 (206)
132 2rdm_A Response regulator rece 27.7 1.2E+02 0.0043 20.7 5.6 32 117-148 50-89 (132)
133 3hv2_A Response regulator/HD d 27.6 96 0.0033 22.3 5.1 33 116-148 57-96 (153)
134 2cg8_A Dihydroneopterin aldola 27.3 34 0.0012 28.5 2.5 26 282-307 121-146 (270)
135 4eso_A Putative oxidoreductase 27.3 82 0.0028 25.5 5.0 32 9-43 9-40 (255)
136 2qr3_A Two-component system re 27.2 1E+02 0.0034 21.5 5.0 34 116-149 46-91 (140)
137 2rjn_A Response regulator rece 26.7 95 0.0033 22.3 4.9 34 116-149 50-90 (154)
138 1hdo_A Biliverdin IX beta redu 26.5 47 0.0016 25.5 3.3 31 9-43 5-35 (206)
139 1g63_A Epidermin modifying enz 26.4 46 0.0016 25.7 3.0 37 9-46 4-40 (181)
140 3b2n_A Uncharacterized protein 26.4 1.3E+02 0.0044 20.9 5.5 33 116-148 48-87 (133)
141 3l6d_A Putative oxidoreductase 26.3 37 0.0013 28.7 2.7 34 5-43 7-40 (306)
142 4iiu_A 3-oxoacyl-[acyl-carrier 26.2 1.4E+02 0.0048 24.2 6.3 32 9-43 27-58 (267)
143 3edm_A Short chain dehydrogena 25.7 85 0.0029 25.5 4.8 32 9-43 9-40 (259)
144 2qzj_A Two-component response 25.6 1E+02 0.0035 21.6 4.8 33 116-148 47-85 (136)
145 1srr_A SPO0F, sporulation resp 25.5 1.3E+02 0.0045 20.4 5.3 33 116-148 46-85 (124)
146 2gt1_A Lipopolysaccharide hept 25.5 45 0.0015 28.3 3.1 41 9-49 2-44 (326)
147 4e7p_A Response regulator; DNA 25.5 1.1E+02 0.0039 21.8 5.1 33 116-148 65-104 (150)
148 2qxy_A Response regulator; reg 25.3 98 0.0034 21.8 4.7 32 116-148 47-85 (142)
149 2pl1_A Transcriptional regulat 25.1 1.6E+02 0.0054 19.7 5.9 34 116-149 43-83 (121)
150 3of5_A Dethiobiotin synthetase 25.1 55 0.0019 26.3 3.4 44 105-148 97-150 (228)
151 3h5i_A Response regulator/sens 24.7 1.5E+02 0.0053 20.7 5.7 32 116-147 49-87 (140)
152 3bul_A Methionine synthase; tr 24.6 1.2E+02 0.004 28.5 5.8 43 6-48 97-139 (579)
153 3kht_A Response regulator; PSI 24.4 1.5E+02 0.0051 20.8 5.6 33 116-148 50-91 (144)
154 3fwz_A Inner membrane protein 24.4 57 0.002 23.6 3.2 33 7-44 7-39 (140)
155 3jte_A Response regulator rece 24.2 1.5E+02 0.0051 20.8 5.5 33 116-148 48-87 (143)
156 4dmm_A 3-oxoacyl-[acyl-carrier 24.0 1.1E+02 0.0037 25.1 5.2 33 8-43 28-60 (269)
157 3crn_A Response regulator rece 23.9 1.4E+02 0.0049 20.6 5.3 33 116-148 46-85 (132)
158 4g65_A TRK system potassium up 23.8 20 0.00069 32.6 0.6 34 6-44 2-35 (461)
159 3cu5_A Two component transcrip 23.8 1.1E+02 0.0039 21.5 4.8 31 116-146 48-85 (141)
160 3i42_A Response regulator rece 23.8 1.2E+02 0.0042 20.6 4.9 32 116-147 46-86 (127)
161 4dll_A 2-hydroxy-3-oxopropiona 23.7 94 0.0032 26.3 4.8 32 7-43 31-62 (320)
162 3f67_A Putative dienelactone h 23.7 1.2E+02 0.0042 23.4 5.4 35 9-43 33-67 (241)
163 3n0r_A Response regulator; sig 23.6 1.2E+02 0.0041 25.2 5.4 32 116-147 204-242 (286)
164 2r25_B Osmosensing histidine p 23.5 1.7E+02 0.0058 20.3 5.6 34 116-149 51-92 (133)
165 3lp6_A Phosphoribosylaminoimid 23.5 1.2E+02 0.0043 23.1 4.8 52 1-53 1-54 (174)
166 3cz5_A Two-component response 23.4 1.7E+02 0.0059 20.8 5.8 33 116-148 50-89 (153)
167 1p6q_A CHEY2; chemotaxis, sign 23.4 1.2E+02 0.0041 20.7 4.8 33 116-148 50-91 (129)
168 3grc_A Sensor protein, kinase; 23.4 1.1E+02 0.0037 21.5 4.5 33 116-148 49-90 (140)
169 3qvl_A Putative hydantoin race 23.4 3E+02 0.01 22.3 8.3 39 103-144 58-97 (245)
170 1mb3_A Cell division response 23.3 1E+02 0.0035 20.9 4.3 32 116-147 44-84 (124)
171 2gdz_A NAD+-dependent 15-hydro 23.2 1.7E+02 0.0057 23.7 6.2 32 9-43 8-39 (267)
172 3lf2_A Short chain oxidoreduct 23.1 1.2E+02 0.004 24.7 5.2 33 8-43 8-40 (265)
173 3dqp_A Oxidoreductase YLBE; al 23.0 50 0.0017 25.9 2.8 20 24-43 13-32 (219)
174 1nff_A Putative oxidoreductase 22.8 1.7E+02 0.0059 23.6 6.2 32 9-43 8-39 (260)
175 3tox_A Short chain dehydrogena 22.7 90 0.0031 25.8 4.4 32 8-42 8-39 (280)
176 3lzw_A Ferredoxin--NADP reduct 22.7 23 0.00079 29.9 0.7 34 6-44 6-39 (332)
177 2jk1_A HUPR, hydrogenase trans 22.5 1.3E+02 0.0044 21.1 4.8 33 116-148 43-82 (139)
178 3gvc_A Oxidoreductase, probabl 22.5 1.4E+02 0.0047 24.6 5.5 32 9-43 30-61 (277)
179 1jbe_A Chemotaxis protein CHEY 22.5 1.7E+02 0.0057 19.9 5.4 33 116-148 48-89 (128)
180 3lyh_A Cobalamin (vitamin B12) 22.4 55 0.0019 23.3 2.7 38 280-317 6-43 (126)
181 3rqi_A Response regulator prot 22.3 83 0.0028 23.7 3.9 34 116-149 50-90 (184)
182 1xhf_A DYE resistance, aerobic 22.3 1.8E+02 0.0062 19.5 5.5 34 116-149 46-85 (123)
183 2fb6_A Conserved hypothetical 22.2 1E+02 0.0035 21.7 4.0 36 8-43 8-47 (117)
184 1byi_A Dethiobiotin synthase; 22.2 1E+02 0.0035 24.2 4.5 50 104-153 95-153 (224)
185 2pnf_A 3-oxoacyl-[acyl-carrier 22.1 1.5E+02 0.0051 23.5 5.6 32 9-43 8-39 (248)
186 3oz2_A Digeranylgeranylglycero 21.9 49 0.0017 28.6 2.7 18 24-41 16-33 (397)
187 2pd6_A Estradiol 17-beta-dehyd 21.9 1.9E+02 0.0066 23.1 6.4 21 23-43 19-39 (264)
188 1lt8_A Betaine-homocysteine me 21.8 2.3E+02 0.008 25.0 7.0 42 103-147 141-187 (406)
189 2a9o_A Response regulator; ess 21.7 1.8E+02 0.0063 19.3 5.9 34 116-149 44-83 (120)
190 3cfy_A Putative LUXO repressor 21.7 1.7E+02 0.0059 20.4 5.4 33 116-148 47-86 (137)
191 1cyd_A Carbonyl reductase; sho 21.6 1.8E+02 0.0063 22.9 6.1 21 23-43 19-39 (244)
192 1i3c_A Response regulator RCP1 21.6 1.2E+02 0.0042 21.6 4.6 33 116-148 60-101 (149)
193 2ptg_A Enoyl-acyl carrier redu 21.6 1.6E+02 0.0056 24.6 5.9 31 9-42 10-42 (319)
194 2q5c_A NTRC family transcripti 21.3 98 0.0033 24.1 4.1 37 105-147 133-169 (196)
195 2ehd_A Oxidoreductase, oxidore 21.3 67 0.0023 25.5 3.3 21 23-43 17-37 (234)
196 2dkn_A 3-alpha-hydroxysteroid 21.3 66 0.0023 25.7 3.3 21 23-43 13-33 (255)
197 1ivn_A Thioesterase I; hydrola 21.3 58 0.002 24.8 2.8 43 272-315 56-105 (190)
198 3t8y_A CHEB, chemotaxis respon 21.2 1.8E+02 0.006 21.2 5.5 32 116-147 70-107 (164)
199 3dhn_A NAD-dependent epimerase 21.2 59 0.002 25.6 2.9 32 8-43 5-36 (227)
200 1kgs_A DRRD, DNA binding respo 21.2 1.7E+02 0.0058 22.6 5.7 34 116-149 45-85 (225)
201 3lte_A Response regulator; str 21.2 1.9E+02 0.0065 19.7 5.5 32 116-147 49-88 (132)
202 3d3w_A L-xylulose reductase; u 21.2 2.1E+02 0.0073 22.5 6.4 21 23-43 19-39 (244)
203 3eod_A Protein HNR; response r 21.2 2E+02 0.0069 19.5 5.9 37 1-41 1-37 (130)
204 4as2_A Phosphorylcholine phosp 21.0 76 0.0026 27.2 3.6 24 21-44 145-168 (327)
205 3eul_A Possible nitrate/nitrit 21.0 1.3E+02 0.0044 21.5 4.6 33 116-148 60-99 (152)
206 3sbx_A Putative uncharacterize 20.9 1.8E+02 0.0062 22.6 5.4 36 6-44 12-51 (189)
207 1xjc_A MOBB protein homolog; s 20.7 2E+02 0.0067 21.8 5.5 37 9-45 6-42 (169)
208 3p9x_A Phosphoribosylglycinami 20.6 80 0.0027 25.1 3.4 30 117-146 31-60 (211)
209 4hb9_A Similarities with proba 20.5 61 0.0021 28.2 3.1 29 8-41 2-30 (412)
210 3ppi_A 3-hydroxyacyl-COA dehyd 20.5 1.2E+02 0.004 24.9 4.7 32 9-43 31-62 (281)
211 3c97_A Signal transduction his 20.3 2.2E+02 0.0077 19.7 5.8 20 116-135 53-74 (140)
212 3r6d_A NAD-dependent epimerase 20.2 76 0.0026 24.9 3.3 21 23-43 17-38 (221)
213 1tjn_A Sirohydrochlorin cobalt 20.1 90 0.0031 23.3 3.5 37 280-316 25-63 (156)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=8.8e-57 Score=413.32 Aligned_cols=329 Identities=22% Similarity=0.414 Sum_probs=252.8
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCC--CEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRG--AIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCE 83 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rG--h~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 83 (363)
++.||+++|+|++||++||++||+.|++|| +.|||++++.+..++.+... ...++|+|+.+| +++|++.+
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip-----dglp~~~~ 83 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH-----DGLPKGYV 83 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC-----CCCCTTCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC-----CCCCCCcc
Confidence 478999999999999999999999999999 99999999655443322110 012469999887 57777654
Q ss_pred CCCCCCChhHHHHHHHH-HhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccc
Q 039413 84 NCDLLPTTDFARFLNSL-HMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSK 162 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~ 162 (363)
.... +...+..+..+. ..+.+.+++++++.+.++||||+|.|++|+.++|+++|||++.||+++++.++.+++.+...
T Consensus 84 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 162 (454)
T 3hbf_A 84 SSGN-PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIR 162 (454)
T ss_dssp CCSC-TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHH
T ss_pred ccCC-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHH
Confidence 4332 111223344433 34567777776553457999999999999999999999999999999999988777654321
Q ss_pred cccC--CCCCCCCc-CCCCCCCCcccccCCCCCCCC-Cc--cHHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhhc
Q 039413 163 VHEN--VTSDSDYF-NIPGLPDHIQFTKVQLPISEQ-DD--DFKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKAK 236 (363)
Q Consensus 163 ~~~~--~~~~~~~~-~~p~~~~~~~~~~~~l~~~~~-~~--~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~~ 236 (363)
.... ....+.++ .+||+|. ++.+++|.++. .. ....+..+......+++++++|||++||+++++++++.+
T Consensus 163 ~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~ 239 (454)
T 3hbf_A 163 EKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF 239 (454)
T ss_dssp HTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS
T ss_pred hhcCCCccccccccccCCCCCC---cChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC
Confidence 1100 00112333 4899985 88889998765 21 244455556666788999999999999999999999876
Q ss_pred CCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEE
Q 039413 237 QEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVI 316 (363)
Q Consensus 237 ~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~ 316 (363)
+++++|||++...+.. ....+.+|.+|||+++++|||||||||+..++.+++++++.||++++++|||++
T Consensus 240 -~~v~~vGPl~~~~~~~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~ 309 (454)
T 3hbf_A 240 -KLLLNVGPFNLTTPQR---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSF 309 (454)
T ss_dssp -SCEEECCCHHHHSCCS---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred -CCEEEECCcccccccc---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 7999999998643211 011357899999999999999999999999999999999999999999999999
Q ss_pred eCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 317 RGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 317 ~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+.+.. .. +|++|.+++++||+++ +|+||.+||+|++||+|
T Consensus 310 ~~~~~----~~--lp~~~~~~~~~~~~vv-~w~Pq~~vL~h~~v~~f 349 (454)
T 3hbf_A 310 RGDPK----EK--LPKGFLERTKTKGKIV-AWAPQVEILKHSSVGVF 349 (454)
T ss_dssp CSCHH----HH--SCTTHHHHTTTTEEEE-SSCCHHHHHHSTTEEEE
T ss_pred CCcch----hc--CCHhHHhhcCCceEEE-eeCCHHHHHhhcCcCeE
Confidence 87632 23 8999999999999999 89999999999999987
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=8.5e-49 Score=366.10 Aligned_cols=337 Identities=28% Similarity=0.392 Sum_probs=234.3
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCCC--hhhhHHHhhhhhccCCceeEEEecCCCccCC
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPVN--AARFKTVHARAIDSGLQIRLIEIQFPWQQAG 77 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 77 (363)
|+ ..+++||+++|+|++||++||++|+++|++| ||+|||++++.+ ...+.... .....+++|+.++...
T Consensus 1 M~-~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~---~~~~~~i~~~~l~~~~---- 72 (480)
T 2vch_A 1 ME-ESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVL---DSLPSSISSVFLPPVD---- 72 (480)
T ss_dssp ------CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHH---C-CCTTEEEEECCCCC----
T ss_pred CC-CCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhc---cccCCCceEEEcCCCC----
Confidence 53 3456799999999999999999999999998 999999999763 33333211 0002368898887421
Q ss_pred CCCCCCCCCCCCChhH-HHHHHHHHhchHHHHHHHHhC--CCCC-cEEEecCCCccHHHHHHHcCCCcEEEecccHHHHH
Q 039413 78 LPEGCENCDLLPTTDF-ARFLNSLHMLQLPFENLFERQ--TLKP-CCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLF 153 (363)
Q Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~--~~~~-d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~ 153 (363)
.++ . ... ..+ ..+......+.+.+++++++. ..++ ||||+|.++.|+..+|+++|+|+|.++++++....
T Consensus 73 ~~~-~---~~~--~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 146 (480)
T 2vch_A 73 LTD-L---SSS--TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLS 146 (480)
T ss_dssp CTT-S---CTT--CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHH
T ss_pred CCC-C---CCc--hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHH
Confidence 111 1 001 122 223344445567777777652 2478 99999999999999999999999999999988776
Q ss_pred HHHHhhccc--cccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCc--cHHHHHHHHHHhhhcCceEEecCccccchhHH
Q 039413 154 CLHLLGVSK--VHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDD--DFKELQEQIFAADKKTYGTIINTFEELESPCI 229 (363)
Q Consensus 154 ~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~ 229 (363)
.+++++... ..........+..+||+++ ++..+++..+... .....+.+.....++++++++||+++||.+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~ 223 (480)
T 2vch_A 147 FFLHLPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAI 223 (480)
T ss_dssp HHHHHHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHH
T ss_pred HHHHHHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHH
Confidence 665544211 0000001122345677764 5555666533321 12222233344567788999999999999988
Q ss_pred HHHHhhc--CCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhh
Q 039413 230 EDYKKAK--QEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEA 307 (363)
Q Consensus 230 ~~~~~~~--~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~ 307 (363)
.++++.. .+++++|||++...... . .+.++.+|.+|||++++++||||||||+..++.+++++++.||++
T Consensus 224 ~~l~~~~~~~~~v~~vGpl~~~~~~~-~-------~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~ 295 (480)
T 2vch_A 224 KALQEPGLDKPPVYPVGPLVNIGKQE-A-------KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLAD 295 (480)
T ss_dssp HHHHSCCTTCCCEEECCCCCCCSCSC-C------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCcEEEEeccccccccc-c-------CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHh
Confidence 8887521 26899999998643110 0 012457899999999889999999999999999999999999999
Q ss_pred CCCCeEEEEeCCcch-----------hhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 308 SNKPFVWVIRGESKL-----------EELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 308 ~~~~flW~~~~~~~~-----------~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
++++|||+++..... .+..+. +|+||.+|++++|+++.+|+||.+||+|++||+|
T Consensus 296 ~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~f 361 (480)
T 2vch_A 296 SEQRFLWVIRSPSGIANSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGF 361 (480)
T ss_dssp TTCEEEEEECCCCSSTTTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEE
T ss_pred cCCcEEEEECCccccccccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeE
Confidence 999999999865310 112222 8999999999999999779999999999999987
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.3e-49 Score=372.81 Aligned_cols=349 Identities=26% Similarity=0.469 Sum_probs=233.7
Q ss_pred CCCC-CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhcc-CCceeEEEecCCCccCCC
Q 039413 1 MASE-ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDS-GLQIRLIEIQFPWQQAGL 78 (363)
Q Consensus 1 m~~~-~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~ 78 (363)
|++. +++.||+++|+|++||++||++|+++|++|||+|||++++.+..++.+........ .++++|+.++ +++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~l 75 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGL 75 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCC
Confidence 5433 45679999999999999999999999999999999999876554443221000001 1268888887 345
Q ss_pred CCCCCCCCCCCChhHHHHHHHH-HhchHHHHHHHHhC-----CCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHH
Q 039413 79 PEGCENCDLLPTTDFARFLNSL-HMLQLPFENLFERQ-----TLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCL 152 (363)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~-----~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~ 152 (363)
++...+... ...+..++..+ ..+.+.++++++.+ +.++||||+|.++.|+..+|+++|+|+|.++++++...
T Consensus 76 p~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 153 (482)
T 2pq6_A 76 TPMEGDGDV--SQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSL 153 (482)
T ss_dssp C-----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHH
T ss_pred CCcccccCc--chhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHH
Confidence 541000110 11233333443 45677788888753 24799999999999999999999999999999998776
Q ss_pred HHHHHhhc-----cccccCCC--CC---CCCc-CCCCCCCCcccccCCCCCCCCCc----cHHHHHHHHHHhhhcCceEE
Q 039413 153 FCLHLLGV-----SKVHENVT--SD---SDYF-NIPGLPDHIQFTKVQLPISEQDD----DFKELQEQIFAADKKTYGTI 217 (363)
Q Consensus 153 ~~~~~~~~-----~~~~~~~~--~~---~~~~-~~p~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~l 217 (363)
..+.+++. ..+..... .. +... .+||++. ++..+++.++... ....++........++++++
T Consensus 154 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl 230 (482)
T 2pq6_A 154 LNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTIL 230 (482)
T ss_dssp HHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEE
T ss_pred HHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEE
Confidence 55433221 11111000 00 1112 3567653 5556666554321 12333334445567889999
Q ss_pred ecCccccchhHHHHHHhhcCCceEEeCcCCCC-CCCCchhhhcC--CCCCCCchhhccccCCCCCCcEEEEecCCCcCCC
Q 039413 218 INTFEELESPCIEDYKKAKQEKVWCIGPVSLC-NKEPIDKAERG--KKASIDVPECLTWLDSQQPTSVVYVCLGSICNLP 294 (363)
Q Consensus 218 ~nt~~~le~~~~~~~~~~~~~~v~~VGpl~~~-~~~~~~~~~~~--~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~ 294 (363)
+||+++||+++++++++.+ +++++|||++.. +.....+.... ...+..+.+|.+|||++++++||||||||...++
T Consensus 231 ~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~ 309 (482)
T 2pq6_A 231 LNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMT 309 (482)
T ss_dssp ESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCC
T ss_pred EcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCC
Confidence 9999999999999999877 899999999763 11100000000 0112234679999999988899999999999899
Q ss_pred hhHHHHHHHHHhhCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 295 SSQLIELGLGLEASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 295 ~~~~~~~~~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
.+++++++.+|++++++|||+++.+...++... +|++|.+++++|++++ +|+||.+||+||+|++|
T Consensus 310 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~~~~~~v~-~~~pq~~~L~h~~~~~~ 375 (482)
T 2pq6_A 310 PEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVI--FSSEFTNEIADRGLIA-SWCPQDKVLNHPSIGGF 375 (482)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGG--SCHHHHHHHTTTEEEE-SCCCHHHHHTSTTEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEEcCCcccccccc--CcHhHHHhcCCCEEEE-eecCHHHHhcCCCCCEE
Confidence 999999999999999999999986421111122 7899999999999988 79999999999999886
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=8.6e-48 Score=357.08 Aligned_cols=335 Identities=25% Similarity=0.407 Sum_probs=229.9
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCE--EEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCC
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAI--VTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGL 78 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~--VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 78 (363)
|++.+++.||+++|+|++||++||++||++|++|||+ ||+++++....++..... .....+++++.++ +++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~--~~~~~~i~~~~i~-----~gl 73 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM--HTMQCNIKSYDIS-----DGV 73 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECC-----CCC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc--ccCCCceEEEeCC-----CCC
Confidence 6666667899999999999999999999999999755 677887543332211100 0001368888875 356
Q ss_pred CCCCCCCCCCCChhHHHHHHHH-HhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHH
Q 039413 79 PEGCENCDLLPTTDFARFLNSL-HMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHL 157 (363)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~ 157 (363)
+++.+.. ......+..+..+. ..+...+++++++.+.++||||+|.++.|+..+|+++|+|.|.++++++..+..+.+
T Consensus 74 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 152 (456)
T 2c1x_A 74 PEGYVFA-GRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVY 152 (456)
T ss_dssp CTTCCCC-CCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHT
T ss_pred CCccccc-CChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhh
Confidence 6543211 11111123333333 234455555554323589999999999999999999999999999999877655433
Q ss_pred hhcc----ccccCCCCCCC-CcCCCCCCCCcccccCCCCCCCCCc----cHHHHHHHHHHhhhcCceEEecCccccchhH
Q 039413 158 LGVS----KVHENVTSDSD-YFNIPGLPDHIQFTKVQLPISEQDD----DFKELQEQIFAADKKTYGTIINTFEELESPC 228 (363)
Q Consensus 158 ~~~~----~~~~~~~~~~~-~~~~p~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~ 228 (363)
.+.. +.......... ...+||++. ++.++++..+... .+..+..++.....+++++++|||++||.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~ 229 (456)
T 2c1x_A 153 IDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSL 229 (456)
T ss_dssp HHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHH
T ss_pred hHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHH
Confidence 2211 10000011112 235788875 6777777643321 2334444444456789999999999999999
Q ss_pred HHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhC
Q 039413 229 IEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEAS 308 (363)
Q Consensus 229 ~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~ 308 (363)
++++++.+ +++++|||++...+.. ....+.+|.+|||++++++||||||||....+.+++++++.+|+++
T Consensus 230 ~~~~~~~~-~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 299 (456)
T 2c1x_A 230 TNDLKSKL-KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEAS 299 (456)
T ss_dssp HHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhc
Confidence 99998876 7899999997642211 0112457999999988899999999999988999999999999999
Q ss_pred CCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCccC
Q 039413 309 NKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 309 ~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
+++|||+++.+.. .. +|++|.++++++++++ +|+||.+||+|+++++|
T Consensus 300 ~~~~lw~~~~~~~----~~--l~~~~~~~~~~~~~v~-~w~pq~~vL~h~~~~~f 347 (456)
T 2c1x_A 300 RVPFIWSLRDKAR----VH--LPEGFLEKTRGYGMVV-PWAPQAEVLAHEAVGAF 347 (456)
T ss_dssp TCCEEEECCGGGG----GG--SCTTHHHHHTTTEEEE-SCCCHHHHHTSTTEEEE
T ss_pred CCeEEEEECCcch----hh--CCHHHHhhcCCceEEe-cCCCHHHHhcCCcCCEE
Confidence 9999999976421 22 8999999999999988 79999999999999886
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.4e-48 Score=359.93 Aligned_cols=333 Identities=26% Similarity=0.405 Sum_probs=236.7
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCChh-hhHHHhhhhhccCCceeEEEecCCCccCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNAA-RFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGC 82 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 82 (363)
++.||+++|+|++||++||++||++|++| ||+|||++++.... .+.+..........+++|+.++.. .+++ .
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~-~ 82 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPP-Q 82 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCC-G
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCc-c
Confidence 46799999999999999999999999999 99999999976532 122221111112246899888732 1222 1
Q ss_pred CCCCCCCChhHHHHHHHHHhchHHHHHHHHhC-CCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhcc
Q 039413 83 ENCDLLPTTDFARFLNSLHMLQLPFENLFERQ-TLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVS 161 (363)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~ 161 (363)
+... ..... +...+..+.+.+++++++. ..++||||+|.++.|+..+|+++|+|+++++++++..+..+++++..
T Consensus 83 ~~~~---~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 158 (463)
T 2acv_A 83 ELLK---SPEFY-ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNR 158 (463)
T ss_dssp GGGG---SHHHH-HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGS
T ss_pred cccC---CccHH-HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhh
Confidence 1000 11112 4444455667888888762 35799999999999999999999999999999998887766666543
Q ss_pred ccccCCCCCCC---CcCCCCC-CCCcccccCCCCCCCC-CccHHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhhc
Q 039413 162 KVHENVTSDSD---YFNIPGL-PDHIQFTKVQLPISEQ-DDDFKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKAK 236 (363)
Q Consensus 162 ~~~~~~~~~~~---~~~~p~~-~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~~ 236 (363)
........... ...+||+ ++ ++.++++..+. +......+.+.....++++++++|||++||+++++.+++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 159 QIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp CTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred cccCCCCCccccCceeECCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 21111111111 3457887 53 55556553221 11122222333344678889999999999999988888755
Q ss_pred --CCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCc-CCChhHHHHHHHHHhhCCCCeE
Q 039413 237 --QEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSIC-NLPSSQLIELGLGLEASNKPFV 313 (363)
Q Consensus 237 --~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~-~l~~~~~~~~~~~l~~~~~~fl 313 (363)
.+++++|||++......... ..+.++.+|.+|||++++++||||||||+. .++.+++++++.+|++++++||
T Consensus 236 ~p~~~v~~vGpl~~~~~~~~~~-----~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 236 EKIPPIYAVGPLLDLKGQPNPK-----LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp TTSCCEEECCCCCCSSCCCBTT-----BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred ccCCcEEEeCCCcccccccccc-----cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 57999999998643101000 001135789999999988999999999999 8999999999999999999999
Q ss_pred EEEeCCcchhhhhhccchhhHHHHh--CCCceEecCchhHHhhhcCCCCccC
Q 039413 314 WVIRGESKLEELEKWLVEENFKERI--KGRGLLIRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 314 W~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~vv~~W~PQ~~iL~Hp~v~~F 363 (363)
|+++.+. +. +|++|.+++ +++++++ +|+||.+||+||++++|
T Consensus 311 ~~~~~~~-----~~--l~~~~~~~~~~~~~~~v~-~w~pq~~vL~h~~~~~f 354 (463)
T 2acv_A 311 WSNSAEK-----KV--FPEGFLEWMELEGKGMIC-GWAPQVEVLAHKAIGGF 354 (463)
T ss_dssp EECCCCG-----GG--SCTTHHHHHHHHCSEEEE-SSCCHHHHHHSTTEEEE
T ss_pred EEECCCc-----cc--CChhHHHhhccCCCEEEE-ccCCHHHHhCCCccCeE
Confidence 9998641 12 888998888 8899988 69999999999999886
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.96 E-value=1.6e-27 Score=220.40 Aligned_cols=297 Identities=14% Similarity=0.118 Sum_probs=177.4
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENC 85 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 85 (363)
.++||++++++++||++|+++|+++|++|||+||+++++...+.+... +++++.++. +++.+....
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~-----~~~~~~~~~ 76 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDS-----ILPKESNPE 76 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCC-----CSCCTTCTT
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCc-----cccccccch
Confidence 356999999999999999999999999999999999997665444332 477776652 223221110
Q ss_pred CCCCC--hhH-HHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhccc
Q 039413 86 DLLPT--TDF-ARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSK 162 (363)
Q Consensus 86 ~~~~~--~~~-~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~ 162 (363)
..... ... ..+........+.+.+++++ .++||||+|.++.|+..+|+++|+|.|.+++..+.... +.......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~-~~~~~~~~ 153 (424)
T 2iya_A 77 ESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG-FEEDVPAV 153 (424)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT-HHHHSGGG
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc-cccccccc
Confidence 00111 111 12222223334556666654 68999999998889999999999999999877642111 11000000
Q ss_pred cccCCCCCCCCcCCCCCCCCcccccCCCCCCCCC-ccHHHH---HHHHH----------HhhhcCceEEecCccccchhH
Q 039413 163 VHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQD-DDFKEL---QEQIF----------AADKKTYGTIINTFEELESPC 228 (363)
Q Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~-~~~~~~---~~~~~----------~~~~~~~~~l~nt~~~le~~~ 228 (363)
.............|. ...+...+... .....+ ..+.. ......+.+++|++.+++.+.
T Consensus 154 -~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~ 225 (424)
T 2iya_A 154 -QDPTADRGEEAAAPA-------GTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG 225 (424)
T ss_dssp -SCCCC----------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG
T ss_pred -ccccccccccccccc-------ccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc
Confidence 000000000000000 00000001000 001111 11111 111246788999999998642
Q ss_pred HHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhC
Q 039413 229 IEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEAS 308 (363)
Q Consensus 229 ~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~ 308 (363)
..++++++.|||+.... .+..+|++.++++++|||+|||......+++.+++++|+++
T Consensus 226 -----~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~ 283 (424)
T 2iya_A 226 -----DTVGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGL 283 (424)
T ss_dssp -----GGCCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTC
T ss_pred -----cCCCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcC
Confidence 34567899999975321 12347888766778999999999877788999999999998
Q ss_pred CCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCC
Q 039413 309 NKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAV 360 (363)
Q Consensus 309 ~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v 360 (363)
+.+|+|.+......+...+ + .++..++ +|+||.++|+|.++
T Consensus 284 ~~~~~~~~g~~~~~~~~~~--~--------~~~v~~~-~~~~~~~~l~~~d~ 324 (424)
T 2iya_A 284 DWHVVLSVGRFVDPADLGE--V--------PPNVEVH-QWVPQLDILTKASA 324 (424)
T ss_dssp SSEEEEECCTTSCGGGGCS--C--------CTTEEEE-SSCCHHHHHTTCSE
T ss_pred CcEEEEEECCcCChHHhcc--C--------CCCeEEe-cCCCHHHHHhhCCE
Confidence 9999998865321111111 2 2344455 89999999999864
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.92 E-value=2.2e-24 Score=198.58 Aligned_cols=275 Identities=14% Similarity=0.111 Sum_probs=162.4
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDL 87 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
+||++++.++.||++|+++|+++|++|||+|||+++....+.+.. .+++++.++... .+..+....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~i~~~~-----~~~~~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE---------VGVPHVPVGPSA-----RAPIQRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH---------cCCeeeeCCCCH-----HHHhhcccc
Confidence 489999999999999999999999999999999998764433332 257788776321 111111110
Q ss_pred CCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecC-CCcc--HHHHHHHcCCCcEEEecccHHHHHHHHHhhccccc
Q 039413 88 LPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDM-CFPW--TVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSKVH 164 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~-~~~~--~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
.....+..++. ......++++++. ..++||||+|. +..| +..+|+++|+|.|.+++++++...
T Consensus 67 ~~~~~~~~~~~--~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~----------- 132 (415)
T 1iir_A 67 LTAEDVRRFTT--EAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS----------- 132 (415)
T ss_dssp CCHHHHHHHHH--HHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------
T ss_pred cchHHHHHHHH--HHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------
Confidence 00001111111 1123445555542 25899999998 6678 889999999999999877543210
Q ss_pred cCCCCCCCCcCCCCCCCCcccccCCCCCC-CCCcc----HHH-----H---HHHHHHh------------hhcCceEEec
Q 039413 165 ENVTSDSDYFNIPGLPDHIQFTKVQLPIS-EQDDD----FKE-----L---QEQIFAA------------DKKTYGTIIN 219 (363)
Q Consensus 165 ~~~~~~~~~~~~p~~~~~~~~~~~~l~~~-~~~~~----~~~-----~---~~~~~~~------------~~~~~~~l~n 219 (363)
.++|... .. ..++.- ..... ... + ....... .... .+++|
T Consensus 133 ---------~~~p~~~----~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~ 197 (415)
T 1iir_A 133 ---------PYYPPPP----LG-EPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVA 197 (415)
T ss_dssp ---------SSSCCCC--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEEC
T ss_pred ---------cccCCcc----CC-ccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEe
Confidence 0111100 00 000000 00000 000 0 0011100 1122 57889
Q ss_pred Cccccch-hHHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHH
Q 039413 220 TFEELES-PCIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQL 298 (363)
Q Consensus 220 t~~~le~-~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~ 298 (363)
+++++++ + +... +++.|||++..+. +..+.+|.+|||+++ ++|||||||.. .+.+.+
T Consensus 198 ~~~~l~~~~-----~~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~ 255 (415)
T 1iir_A 198 ADPVLAPLQ-----PTDL--DAVQTGAWILPDE------------RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAV 255 (415)
T ss_dssp SCTTTSCCC-----CCSS--CCEECCCCCCCCC------------CCCCHHHHHHHHTSS--CCEEEECC----CCHHHH
T ss_pred eChhhcCCC-----cccC--CeEeeCCCccCcc------------cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHH
Confidence 9999875 2 1112 7999999876421 124578999998753 69999999988 677889
Q ss_pred HHHHHHHhhCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCCcc
Q 039413 299 IELGLGLEASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAVGG 362 (363)
Q Consensus 299 ~~~~~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v~~ 362 (363)
++++++|++++++|+|..+..... ... +|+ +.. +.+|+||.++| +++.+
T Consensus 256 ~~~~~al~~~~~~~v~~~g~~~~~--~~~--~~~--------~v~-~~~~~~~~~~l--~~~d~ 304 (415)
T 1iir_A 256 RVAIDAIRAHGRRVILSRGWADLV--LPD--DGA--------DCF-AIGEVNHQVLF--GRVAA 304 (415)
T ss_dssp HHHHHHHHHTTCCEEECTTCTTCC--CSS--CGG--------GEE-ECSSCCHHHHG--GGSSE
T ss_pred HHHHHHHHHCCCeEEEEeCCCccc--ccC--CCC--------CEE-EeCcCChHHHH--hhCCE
Confidence 999999999999999987654210 011 332 233 55999999999 44443
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.92 E-value=2.3e-24 Score=197.59 Aligned_cols=275 Identities=16% Similarity=0.120 Sum_probs=149.1
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCcc--CCCCCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQ--AGLPEGCE 83 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~ 83 (363)
++++|+++++|++||++|+++|+++|++|||+|||+|++....... .++.+..+...... ...+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhHhhhccccccc
Confidence 5789999999999999999999999999999999999876543221 13444444211000 00011000
Q ss_pred CCCCCCC----hhH-HH-HHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHH
Q 039413 84 NCDLLPT----TDF-AR-FLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHL 157 (363)
Q Consensus 84 ~~~~~~~----~~~-~~-~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~ 157 (363)
....... ... .. +..........+.+++++ .+||+||+|.+..|+..+|+++|+|.+.+.............
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~ 168 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA 168 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh
Confidence 0000000 001 11 111112223444555555 579999999999999999999999998875542211100000
Q ss_pred hhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhhhcCceEEecCccccchhHHHHHH--hh
Q 039413 158 LGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAADKKTYGTIINTFEELESPCIEDYK--KA 235 (363)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~--~~ 235 (363)
.... .......+................ ........ ..
T Consensus 169 ~~~~------------------------------------~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 208 (400)
T 4amg_A 169 LIRR------------------------------------AMSKDYERHGVTGEPTGSVRLTTT----PPSVEALLPEDR 208 (400)
T ss_dssp HHHH------------------------------------HTHHHHHHTTCCCCCSCEEEEECC----CHHHHHTSCGGG
T ss_pred HHHH------------------------------------HHHHHHHHhCCCcccccchhhccc----CchhhccCcccc
Confidence 0000 000000000000000001111111 00000000 00
Q ss_pred cCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCC--hhHHHHHHHHHhhCCCCeE
Q 039413 236 KQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLP--SSQLIELGLGLEASNKPFV 313 (363)
Q Consensus 236 ~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~--~~~~~~~~~~l~~~~~~fl 313 (363)
..+..+++.+.... ....+.+||+.++++++|||||||+...+ .+++.+++++|++++++|+
T Consensus 209 ~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v 272 (400)
T 4amg_A 209 RSPGAWPMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFV 272 (400)
T ss_dssp CCTTCEECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEE
T ss_pred cCCcccCccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEE
Confidence 11233333332211 12345579999999999999999987544 4779999999999999999
Q ss_pred EEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCC
Q 039413 314 WVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAV 360 (363)
Q Consensus 314 W~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v 360 (363)
|........ .... +|+ +..++ +|+||.++|+|.++
T Consensus 273 ~~~~~~~~~-~~~~--~~~--------~v~~~-~~~p~~~lL~~~~~ 307 (400)
T 4amg_A 273 LTLGGGDLA-LLGE--LPA--------NVRVV-EWIPLGALLETCDA 307 (400)
T ss_dssp EECCTTCCC-CCCC--CCT--------TEEEE-CCCCHHHHHTTCSE
T ss_pred EEecCcccc-cccc--CCC--------CEEEE-eecCHHHHhhhhhh
Confidence 988764321 1111 343 34445 89999999999764
No 9
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.90 E-value=1.4e-22 Score=187.60 Aligned_cols=291 Identities=16% Similarity=0.145 Sum_probs=165.6
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCC
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPE 80 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (363)
|++.+.++||++++.++.||++|++.|+++|++|||+||++++....+.+.. .+++++.++. .++.
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~-----~~~~ 66 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHS-----TLPG 66 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCC-----CSCC
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCC-----cCcc
Confidence 6665566799999999999999999999999999999999998754333221 2477776652 1121
Q ss_pred CCCCCCCCCC--hhH-HHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHHHH
Q 039413 81 GCENCDLLPT--TDF-ARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHL 157 (363)
Q Consensus 81 ~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~ 157 (363)
.......... ... ..+..........+.+++++ .++|+||+|.+..|+..+|+++|+|.|.+++....... +..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~ 143 (430)
T 2iyf_A 67 PDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEE 143 (430)
T ss_dssp TTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHH
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-ccc
Confidence 1111000000 011 11122222334556667765 68999999988778899999999999998865431000 000
Q ss_pred hhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHH------HHhhhcCceEEecCccccchhHHHH
Q 039413 158 LGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQI------FAADKKTYGTIINTFEELESPCIED 231 (363)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~l~nt~~~le~~~~~~ 231 (363)
........ .....++. .. + . .....+..+. ......++.+++|+..+++...
T Consensus 144 ~~~~~~~~------~~~~~~~~------~~-----~-~-~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~--- 201 (430)
T 2iyf_A 144 EVAEPMWR------EPRQTERG------RA-----Y-Y-ARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA--- 201 (430)
T ss_dssp HTHHHHHH------HHHHSHHH------HH-----H-H-HHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG---
T ss_pred ccccchhh------hhccchHH------HH-----H-H-HHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc---
Confidence 00000000 00000000 00 0 0 0000011100 0011246788999998887531
Q ss_pred HHhhcCCc-eEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhC-C
Q 039413 232 YKKAKQEK-VWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEAS-N 309 (363)
Q Consensus 232 ~~~~~~~~-v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~-~ 309 (363)
..++++ ++.|||..... .+..+|++..+++++||+++||......+.+.+++++|++. +
T Consensus 202 --~~~~~~~v~~vG~~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~ 262 (430)
T 2iyf_A 202 --DRVDEDVYTFVGACQGDR-----------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPG 262 (430)
T ss_dssp --GGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTT
T ss_pred --ccCCCccEEEeCCcCCCC-----------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCC
Confidence 234567 99999864321 11235776656678999999999866778899999999986 7
Q ss_pred CCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCC
Q 039413 310 KPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAV 360 (363)
Q Consensus 310 ~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v 360 (363)
.+|+|.+......+. + ++..++..++ +|+||.++|+|.++
T Consensus 263 ~~~~~~~G~~~~~~~-----l-----~~~~~~v~~~-~~~~~~~~l~~ad~ 302 (430)
T 2iyf_A 263 WHLVLQIGRKVTPAE-----L-----GELPDNVEVH-DWVPQLAILRQADL 302 (430)
T ss_dssp EEEEEECC---CGGG-----G-----CSCCTTEEEE-SSCCHHHHHTTCSE
T ss_pred eEEEEEeCCCCChHH-----h-----ccCCCCeEEE-ecCCHHHHhhccCE
Confidence 889998765321111 1 1122344455 89999999999875
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.90 E-value=4.1e-23 Score=190.25 Aligned_cols=273 Identities=12% Similarity=0.039 Sum_probs=163.2
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDL 87 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
+||++++.++.||++|+++|+++|++|||+|||+++....+.+... +++++.++.... ..+.. . ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~-~~~~~-~--~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQH-MMLQE-G--MPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGG-GCCCT-T--SCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHH-HHHhh-c--ccc
Confidence 4899999999999999999999999999999999987644433322 477877763211 11111 0 000
Q ss_pred CCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCC-Ccc--HHHHHHHcCCCcEEEecccHHHHHHHHHhhccccc
Q 039413 88 LPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMC-FPW--TVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVSKVH 164 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~-~~~--~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~ 164 (363)
.....+..+.. ......++.+.+. ..++||||+|.+ ..| +..+|+++|+|.|.+++.+.+...
T Consensus 68 ~~~~~~~~~~~--~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~----------- 133 (416)
T 1rrv_A 68 PPPEEEQRLAA--MTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS----------- 133 (416)
T ss_dssp CCHHHHHHHHH--HHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------
T ss_pred chhHHHHHHHH--HHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------
Confidence 00001111111 1123334444322 257999999974 456 788999999999998876532100
Q ss_pred cCCCCCCCCcCCC-CCCCCcccccCCCCCCCCCcc----HH--------HHHHHHH------------HhhhcCceEEec
Q 039413 165 ENVTSDSDYFNIP-GLPDHIQFTKVQLPISEQDDD----FK--------ELQEQIF------------AADKKTYGTIIN 219 (363)
Q Consensus 165 ~~~~~~~~~~~~p-~~~~~~~~~~~~l~~~~~~~~----~~--------~~~~~~~------------~~~~~~~~~l~n 219 (363)
.++| .++ ++. .+....... .. .....+. ...... .+++|
T Consensus 134 ---------~~~p~~~~----~~~--~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~ 197 (416)
T 1rrv_A 134 ---------PHLPPAYD----EPT--TPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLA 197 (416)
T ss_dssp ---------SSSCCCBC----SCC--CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEEC
T ss_pred ---------cccCCCCC----CCC--CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEc
Confidence 0111 100 000 000000000 00 0000111 011123 68899
Q ss_pred CccccchhHHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcC-CChhHH
Q 039413 220 TFEELESPCIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICN-LPSSQL 298 (363)
Q Consensus 220 t~~~le~~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~-l~~~~~ 298 (363)
+..+++++. .. .+++.|||++.... +..+.+|.+|||++ +++|||+|||... .+.+.+
T Consensus 198 ~~~~l~~~~-----~~--~~~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~ 256 (416)
T 1rrv_A 198 ADPVLAPLQ-----PD--VDAVQTGAWLLSDE------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAA 256 (416)
T ss_dssp SCTTTSCCC-----SS--CCCEECCCCCCCCC------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHH
T ss_pred cCccccCCC-----CC--CCeeeECCCccCcc------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHH
Confidence 999988531 11 27999999976421 11457899999875 3699999999864 567889
Q ss_pred HHHHHHHhhCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcC
Q 039413 299 IELGLGLEASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSH 357 (363)
Q Consensus 299 ~~~~~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~H 357 (363)
++++++|++++++|+|..+..... ... +| ++..++ +|+||.++|++
T Consensus 257 ~~~~~al~~~~~~~v~~~g~~~~~--~~~--~~--------~~v~~~-~~~~~~~ll~~ 302 (416)
T 1rrv_A 257 KVAVEAIRAQGRRVILSRGWTELV--LPD--DR--------DDCFAI-DEVNFQALFRR 302 (416)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTCC--CSC--CC--------TTEEEE-SSCCHHHHGGG
T ss_pred HHHHHHHHHCCCeEEEEeCCcccc--ccC--CC--------CCEEEe-ccCChHHHhcc
Confidence 999999999999999988654210 011 22 344445 89999999943
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.85 E-value=4.1e-20 Score=170.10 Aligned_cols=285 Identities=14% Similarity=0.127 Sum_probs=165.0
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCC-
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCE- 83 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~- 83 (363)
..++||++++.++.||++|++.|+++|.+|||+|+++++....+.+.. .++.+..++.. ++....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~---------~G~~~~~~~~~-----~~~~~~~ 83 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA---------AGATVVPYQSE-----IIDADAA 83 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCS-----TTTCCHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------cCCEEEecccc-----ccccccc
Confidence 456799999999999999999999999999999999998665544432 14777776531 111100
Q ss_pred --CCCCCCChhHHH-HHHHHHhchHHHHHHHHhCCCCCcEEEec-CCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhh
Q 039413 84 --NCDLLPTTDFAR-FLNSLHMLQLPFENLFERQTLKPCCIISD-MCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLG 159 (363)
Q Consensus 84 --~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~~d~vI~D-~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~ 159 (363)
.........+.. +..........+.+++++ .++|+||+| .+..++..+|+++|+|++.+.+....... +....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~ 160 (415)
T 3rsc_A 84 EVFGSDDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQ 160 (415)
T ss_dssp HHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHH
T ss_pred hhhccccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-ccccc
Confidence 000001111111 222222333555666655 689999999 77778888999999999988754211000 00000
Q ss_pred ccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCC--ccHHHHHHHH------HHhhh-cCceEEecCccccchhHHH
Q 039413 160 VSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQD--DDFKELQEQI------FAADK-KTYGTIINTFEELESPCIE 230 (363)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~------~~~~~-~~~~~l~nt~~~le~~~~~ 230 (363)
.+.. ......+..... ..+..+..++ ..... ..+..++.+-.+++..
T Consensus 161 ------------------~~~~---~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~--- 216 (415)
T 3rsc_A 161 ------------------DMVT---LAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA--- 216 (415)
T ss_dssp ------------------HHHH---HHTCCCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT---
T ss_pred ------------------cccc---ccccCChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC---
Confidence 0000 000000000000 0001111100 00011 1255666555555532
Q ss_pred HHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCC
Q 039413 231 DYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNK 310 (363)
Q Consensus 231 ~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~ 310 (363)
+...+.++..+||..... .+..+|+...+++.+||+++||......+.+.+++++|++.+.
T Consensus 217 --~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 277 (415)
T 3rsc_A 217 --GDTFDDRFVFVGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPW 277 (415)
T ss_dssp --GGGCCTTEEECCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSC
T ss_pred --cccCCCceEEeCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCc
Confidence 344566799999875421 2234576655667799999999987677889999999999999
Q ss_pred CeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCC
Q 039413 311 PFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAV 360 (363)
Q Consensus 311 ~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v 360 (363)
+|+|.+......+...+ +| ++..++ +|+||.++|+|.++
T Consensus 278 ~~v~~~g~~~~~~~l~~--~~--------~~v~~~-~~~~~~~ll~~ad~ 316 (415)
T 3rsc_A 278 HVVMTLGGQVDPAALGD--LP--------PNVEAH-RWVPHVKVLEQATV 316 (415)
T ss_dssp EEEEECTTTSCGGGGCC--CC--------TTEEEE-SCCCHHHHHHHEEE
T ss_pred EEEEEeCCCCChHHhcC--CC--------CcEEEE-ecCCHHHHHhhCCE
Confidence 99998865422111111 22 334445 89999999987543
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.85 E-value=1.2e-19 Score=166.26 Aligned_cols=281 Identities=16% Similarity=0.115 Sum_probs=160.9
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCD 86 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (363)
++||++++.++.||++|++.|+++|.+|||+|||+++....+.+.. .++++..++... +.......
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~-----~~~~~~~~ 69 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA---------AGAEVVLYKSEF-----DTFHVPEV 69 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH---------TTCEEEECCCGG-----GTSSSSSS
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH---------cCCEEEeccccc-----cccccccc
Confidence 3599999999999999999999999999999999998544333322 247777765321 11000000
Q ss_pred CCCChhH---HH-HHHHHHhchHHHHHHHHhCCCCCcEEEec-CCCccHHHHHHHcCCCcEEEecccHHHHHHHHHhhcc
Q 039413 87 LLPTTDF---AR-FLNSLHMLQLPFENLFERQTLKPCCIISD-MCFPWTVDTAAKFNVPRIIFHEFSCFCLFCLHLLGVS 161 (363)
Q Consensus 87 ~~~~~~~---~~-~~~~~~~~~~~~~~ll~~~~~~~d~vI~D-~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~~~~~~~ 161 (363)
....... .. +..........+.+++++ .++|+||+| .+..++..+|+++|+|+|.+++....... +...+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~ 146 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKEL 146 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-ccccccc
Confidence 0111111 11 222222234556666665 689999999 77778888999999999988644221000 0000000
Q ss_pred ccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHH----------HhhhcC-ceEEecCccccchhHHH
Q 039413 162 KVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIF----------AADKKT-YGTIINTFEELESPCIE 230 (363)
Q Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----------~~~~~~-~~~l~nt~~~le~~~~~ 230 (363)
. .... .. .+..+. .+.....+.. ...... +..++.+-.+++..
T Consensus 147 ~----------~~~~-~~----------~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~--- 200 (402)
T 3ia7_A 147 W----------KSNG-QR----------HPADVE--AVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF--- 200 (402)
T ss_dssp H----------HHHT-CC----------CGGGSH--HHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT---
T ss_pred c----------cccc-cc----------ChhhHH--HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc---
Confidence 0 0000 00 000000 0000000000 001111 45555555555432
Q ss_pred HHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCC
Q 039413 231 DYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNK 310 (363)
Q Consensus 231 ~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~ 310 (363)
....+.++..|||..... .+..+|+...+++.+||+++||......+.+.++++++++.+.
T Consensus 201 --~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~ 261 (402)
T 3ia7_A 201 --AETFDERFAFVGPTLTGR-----------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPW 261 (402)
T ss_dssp --GGGCCTTEEECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSC
T ss_pred --cccCCCCeEEeCCCCCCc-----------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCc
Confidence 234567899999875421 1234566555667799999999987677889999999999999
Q ss_pred CeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCC
Q 039413 311 PFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAV 360 (363)
Q Consensus 311 ~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v 360 (363)
+++|...+....+...+ + .++..++ +|.||.++|+|.++
T Consensus 262 ~~~~~~g~~~~~~~~~~--~--------~~~v~~~-~~~~~~~ll~~ad~ 300 (402)
T 3ia7_A 262 HVVMAIGGFLDPAVLGP--L--------PPNVEAH-QWIPFHSVLAHARA 300 (402)
T ss_dssp EEEEECCTTSCGGGGCS--C--------CTTEEEE-SCCCHHHHHTTEEE
T ss_pred EEEEEeCCcCChhhhCC--C--------CCcEEEe-cCCCHHHHHhhCCE
Confidence 99998875422111111 2 2344445 89999999998653
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.81 E-value=1.1e-18 Score=159.95 Aligned_cols=277 Identities=12% Similarity=0.001 Sum_probs=155.8
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDL 87 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
+||++++.++.||++|++.|+++|.+|||+|+|+++....+.+... ++.+..++..... . .+....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~--~-~~~~~~-- 66 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRA--G-AREPGE-- 66 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSG--G-GSCTTC--
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHH--H-hccccC--
Confidence 4789999999999999999999999999999999986654444332 4777776532110 0 000000
Q ss_pred CCChhH-HHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccH---HHHHHHcCCCcEEEecccHHHHHHHHH-hhcc-
Q 039413 88 LPTTDF-ARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWT---VDTAAKFNVPRIIFHEFSCFCLFCLHL-LGVS- 161 (363)
Q Consensus 88 ~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~---~~vA~~~~iP~v~~~~~~~~~~~~~~~-~~~~- 161 (363)
....+ ..+..........+.+++ .++|+||+|....++ ..+|+++|+|++.+..+.......++. .+..
T Consensus 67 -~~~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~ 141 (404)
T 3h4t_A 67 -LPPGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMY 141 (404)
T ss_dssp -CCTTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHH
Confidence 00011 111122222222333333 259999999665544 678999999999877654310000000 0000
Q ss_pred --ccccCCCCC-CCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhhhcCceEEecCccccchhHHHHHHhhcCC
Q 039413 162 --KVHENVTSD-SDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAADKKTYGTIINTFEELESPCIEDYKKAKQE 238 (363)
Q Consensus 162 --~~~~~~~~~-~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~~~~~~ 238 (363)
......... .....--|+++ . ... ... ...+..+.+....+.+. +..++
T Consensus 142 ~~~~~~~~~~~~~~~~~~lgl~~-----------~---~~~---~~~-----~~~~~~l~~~~~~l~p~------~~~~~ 193 (404)
T 3h4t_A 142 NQGADRLFGDAVNSHRASIGLPP-----------V---EHL---YDY-----GYTDQPWLAADPVLSPL------RPTDL 193 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-----------C---CCH---HHH-----HHCSSCEECSCTTTSCC------CTTCC
T ss_pred HHHHHHHhHHHHHHHHHHcCCCC-----------C---cch---hhc-----cccCCeEEeeCcceeCC------CCCCC
Confidence 000000000 00000001110 0 000 000 01122355666555532 12345
Q ss_pred ceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeC
Q 039413 239 KVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRG 318 (363)
Q Consensus 239 ~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~ 318 (363)
+++.+|+++..... .+++++.+||+.. +.+|||+|||+.. +.+.++.++++|++.+++|+|+.+.
T Consensus 194 ~~~~~G~~~~~~~~------------~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 194 GTVQTGAWILPDQR------------PLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp SCCBCCCCCCCCCC------------CCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred CeEEeCccccCCCC------------CCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 88899987654221 2567889999863 4589999999987 7888999999999999999998765
Q ss_pred CcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCC
Q 039413 319 ESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPA 359 (363)
Q Consensus 319 ~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~ 359 (363)
+... ..+ ..++..++ +|+||.++|.+-+
T Consensus 259 ~~~~-------~~~-----~~~~v~~~-~~~~~~~ll~~~d 286 (404)
T 3h4t_A 259 AGLG-------RID-----EGDDCLVV-GEVNHQVLFGRVA 286 (404)
T ss_dssp TTCC-------CSS-----CCTTEEEE-SSCCHHHHGGGSS
T ss_pred cccc-------ccc-----CCCCEEEe-cCCCHHHHHhhCc
Confidence 4211 110 12344555 8999999997643
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.78 E-value=5.1e-18 Score=154.50 Aligned_cols=257 Identities=12% Similarity=0.049 Sum_probs=152.9
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccC-------CCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQA-------GLPE 80 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------~~~~ 80 (363)
+||++++.++.||++|++.|+++|++|||+||++++....+.+.. .++++..++...... +.+.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG---------VGLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------CCCEEEEeCCcchHHHHhhhcccCcc
Confidence 489999999999999999999999999999999998654332222 246777665321000 0110
Q ss_pred CCCCCCCCCChhH-HHH----H-HHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHH
Q 039413 81 GCENCDLLPTTDF-ARF----L-NSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFC 154 (363)
Q Consensus 81 ~~~~~~~~~~~~~-~~~----~-~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~ 154 (363)
. .+ ..... ..+ . .........+.+++++ .+||+||+|.+..|+..+|+++|+|+|.++.....
T Consensus 72 ~---~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~---- 140 (384)
T 2p6p_A 72 A---IP--SDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD---- 140 (384)
T ss_dssp C---CC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC----
T ss_pred c---cC--cchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc----
Confidence 0 00 10011 111 1 1111223345555555 57999999988788889999999999887532100
Q ss_pred HHHhhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhh-----hcCceEEecCccccchhHH
Q 039413 155 LHLLGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAAD-----KKTYGTIINTFEELESPCI 229 (363)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~nt~~~le~~~~ 229 (363)
..++. ........+..... ..++.+++++...++...
T Consensus 141 ---------------------~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~- 182 (384)
T 2p6p_A 141 ---------------------ADGIH----------------PGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN- 182 (384)
T ss_dssp ---------------------CTTTH----------------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-
T ss_pred ---------------------cchhh----------------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-
Confidence 00000 00001111111111 115678889888777431
Q ss_pred HHHHhhcC-CceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCC-----ChhHHHHHHH
Q 039413 230 EDYKKAKQ-EKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNL-----PSSQLIELGL 303 (363)
Q Consensus 230 ~~~~~~~~-~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l-----~~~~~~~~~~ 303 (363)
. .+ .++..++ . . .+.++.+|+++++++++|||++||.... +.+.+.++++
T Consensus 183 ----~-~~~~~~~~~~-~--~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~ 238 (384)
T 2p6p_A 183 ----A-APARMMRHVA-T--S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAK 238 (384)
T ss_dssp ----S-CCCEECCCCC-C--C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHH
T ss_pred ----C-CCCCceEecC-C--C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHH
Confidence 1 11 1222221 1 0 1235678998766667999999998764 5688999999
Q ss_pred HHhhCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCC
Q 039413 304 GLEASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPA 359 (363)
Q Consensus 304 ~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~ 359 (363)
+|++++.+|+|+.+.+. . +.+. +..++.. + +|+||.++|++-.
T Consensus 239 al~~~~~~~~~~~g~~~---------~-~~l~-~~~~~v~-~-~~~~~~~~l~~~d 281 (384)
T 2p6p_A 239 DLVRWDVELIVAAPDTV---------A-EALR-AEVPQAR-V-GWTPLDVVAPTCD 281 (384)
T ss_dssp HHHTTTCEEEEECCHHH---------H-HHHH-HHCTTSE-E-ECCCHHHHGGGCS
T ss_pred HHhcCCcEEEEEeCCCC---------H-HhhC-CCCCceE-E-cCCCHHHHHhhCC
Confidence 99999999999876321 1 1111 2333444 6 8999999997643
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.75 E-value=9.9e-18 Score=155.41 Aligned_cols=282 Identities=13% Similarity=0.054 Sum_probs=144.6
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCC--C
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGC--E 83 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~ 83 (363)
.++||++++.++.||++|+++|+++|.+|||+||++++....+.+.. .+++++.++......++.... .
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~---------~G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA---------AGLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TTCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh---------CCCceeecCCccchHHHhhhhhcc
Confidence 45799999999999999999999999999999999998654433322 257787775321000000000 0
Q ss_pred C------CCC----CC--Ch-hHHHHHHHHH---------h-chHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCC
Q 039413 84 N------CDL----LP--TT-DFARFLNSLH---------M-LQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVP 140 (363)
Q Consensus 84 ~------~~~----~~--~~-~~~~~~~~~~---------~-~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP 140 (363)
. .+. .. .. .+........ . ....+.+++++ .++|+||+|.++.++..+|+++|+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgiP 167 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGTP 167 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTCC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCCC
Confidence 0 000 00 00 0111111111 0 11223333444 5799999999878889999999999
Q ss_pred cEEEecccHHHHHHHHHhhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhhh---------
Q 039413 141 RIIFHEFSCFCLFCLHLLGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAADK--------- 211 (363)
Q Consensus 141 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------- 211 (363)
+|.+.............+... ....|.. .. . ......+.++.....
T Consensus 168 ~v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~------------~~-~-~~~~~~l~~~~~~~g~~~~~~~~~ 222 (441)
T 2yjn_A 168 HARLLWGPDITTRARQNFLGL-----------LPDQPEE------------HR-E-DPLAEWLTWTLEKYGGPAFDEEVV 222 (441)
T ss_dssp EEEECSSCCHHHHHHHHHHHH-----------GGGSCTT------------TC-C-CHHHHHHHHHHHHTTCCCCCGGGT
T ss_pred EEEEecCCCcchhhhhhhhhh-----------ccccccc------------cc-c-chHHHHHHHHHHHcCCCCCCcccc
Confidence 998854432211101000000 0000100 00 0 111112222111110
Q ss_pred cCceEEecCccccchhHHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCc
Q 039413 212 KTYGTIINTFEELESPCIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSIC 291 (363)
Q Consensus 212 ~~~~~l~nt~~~le~~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~ 291 (363)
..+..+.++..+++.+ ... +. .++++... ..+.++.+|++..+++.+|||++||..
T Consensus 223 ~~~~~l~~~~~~~~~~------~~~-~~-~~~~~~~~----------------~~~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 223 VGQWTIDPAPAAIRLD------TGL-KT-VGMRYVDY----------------NGPSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp SCSSEEECSCGGGSCC------CCC-CE-EECCCCCC----------------CSSCCCCGGGSSCCSSCEEEEEC----
T ss_pred CCCeEEEecCccccCC------CCC-CC-CceeeeCC----------------CCCcccchHhhcCCCCCEEEEECCCCc
Confidence 0222333333333210 000 00 12222100 012457789987667789999999987
Q ss_pred CC---ChhHHHHHHHHHhhCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCC
Q 039413 292 NL---PSSQLIELGLGLEASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPA 359 (363)
Q Consensus 292 ~l---~~~~~~~~~~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~ 359 (363)
.. ..+.+.+++++|++++.+|+|+...+.. .+ +. +..++..++ +|+||.++|.+..
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~----~~--l~-----~~~~~v~~~-~~~~~~~ll~~ad 337 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQL----EG--VA-----NIPDNVRTV-GFVPMHALLPTCA 337 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTTTT----SS--CS-----SCCSSEEEC-CSCCHHHHGGGCS
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCcch----hh--hc-----cCCCCEEEe-cCCCHHHHHhhCC
Confidence 53 4577889999999999999998874321 11 21 112344444 8999999996543
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.67 E-value=9.6e-16 Score=140.12 Aligned_cols=270 Identities=13% Similarity=0.137 Sum_probs=148.6
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCC-C------
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAG-L------ 78 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~------ 78 (363)
.+++|+++..++.||++|++.|+++|.+|||+|+++++ ...+.+.. .++.+..++....... +
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAKD 88 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhcccC
Confidence 45799999999999999999999999999999999998 54443332 2477776652100000 0
Q ss_pred -C---CCCCCCCCCCChhH-HHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHH
Q 039413 79 -P---EGCENCDLLPTTDF-ARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLF 153 (363)
Q Consensus 79 -~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~ 153 (363)
+ .............+ ..+..........+.+++++ .+||+||+|....++..+|+++|+|+|.........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~-- 164 (398)
T 3oti_A 89 NPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD--YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT-- 164 (398)
T ss_dssp CHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC--
T ss_pred CccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc--
Confidence 0 00000000000111 11222223445667777776 579999999877788889999999998765321000
Q ss_pred HHHHhhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhhhcCceEEecCccccchhHHHHHH
Q 039413 154 CLHLLGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAADKKTYGTIINTFEELESPCIEDYK 233 (363)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~~~~~~~~ 233 (363)
..... . .... ......++.......+..+...-.+++..
T Consensus 165 -----------------------~~~~~----~---~~~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 203 (398)
T 3oti_A 165 -----------------------RGMHR----S---IASF-----LTDLMDKHQVSLPEPVATIESFPPSLLLE------ 203 (398)
T ss_dssp -----------------------TTHHH----H---HHTT-----CHHHHHHTTCCCCCCSEEECSSCGGGGTT------
T ss_pred -----------------------cchhh----H---HHHH-----HHHHHHHcCCCCCCCCeEEEeCCHHHCCC------
Confidence 00000 0 0000 01111111000011122232222222210
Q ss_pred hhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCC--ChhHHHHHHHHHhhCCCC
Q 039413 234 KAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNL--PSSQLIELGLGLEASNKP 311 (363)
Q Consensus 234 ~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l--~~~~~~~~~~~l~~~~~~ 311 (363)
......++. ..+.. .+.++.+|++..+++.+||+++||.... ..+.+.+++++|++.+.+
T Consensus 204 --~~~~~~~~~--~~~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (398)
T 3oti_A 204 --AEPEGWFMR--WVPYG--------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDAD 265 (398)
T ss_dssp --SCCCSBCCC--CCCCC--------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSE
T ss_pred --CCCCCCCcc--ccCCC--------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCE
Confidence 000011110 00000 1234557877666677999999998643 667899999999999999
Q ss_pred eEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCC
Q 039413 312 FVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAV 360 (363)
Q Consensus 312 flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v 360 (363)
|+|+..++.. +.+.+ +| ++..++ +|+||.++|+|.++
T Consensus 266 ~v~~~g~~~~-~~l~~--~~--------~~v~~~-~~~~~~~ll~~ad~ 302 (398)
T 3oti_A 266 FVLALGDLDI-SPLGT--LP--------RNVRAV-GWTPLHTLLRTCTA 302 (398)
T ss_dssp EEEECTTSCC-GGGCS--CC--------TTEEEE-SSCCHHHHHTTCSE
T ss_pred EEEEECCcCh-hhhcc--CC--------CcEEEE-ccCCHHHHHhhCCE
Confidence 9999876431 11111 22 334444 89999999998653
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.63 E-value=2.6e-15 Score=137.27 Aligned_cols=273 Identities=13% Similarity=0.059 Sum_probs=138.4
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCC--CCC
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLP--EGC 82 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~ 82 (363)
..++||++++.++.||++|++.|+++|.+|||+|+++++....+.+.. .++.+..++.......+. ...
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG---------AGLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH---------TTCCEEEEESSCCHHHHHSBCTT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh---------CCCeeEecCCccchHhhhhhhcc
Confidence 356799999999999999999999999999999999997544433332 146666665210000000 000
Q ss_pred CCCCCCCC--hh-HHH----HHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHHHHH
Q 039413 83 ENCDLLPT--TD-FAR----FLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCLFCL 155 (363)
Q Consensus 83 ~~~~~~~~--~~-~~~----~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~~~~ 155 (363)
........ .. ... +......+...+.+++++ .++|+||+|....++..+|+++|+|+|.+...........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 00000000 01 111 111112233456666665 5899999998777888899999999987754321100000
Q ss_pred HHhhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHH-HhhhcCceEEecCccccchhHHHHHHh
Q 039413 156 HLLGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIF-AADKKTYGTIINTFEELESPCIEDYKK 234 (363)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~l~nt~~~le~~~~~~~~~ 234 (363)
...... +.....++. ......+..+..+-.+++.. ..
T Consensus 162 ~~~~~~-------------------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 199 (398)
T 4fzr_A 162 SAGVGE-------------------------------------LAPELAELGLTDFPDPLLSIDVCPPSMEAQ-----PK 199 (398)
T ss_dssp HHHHHH-------------------------------------THHHHHTTTCSSCCCCSEEEECSCGGGC---------
T ss_pred HHHHHH-------------------------------------HHHHHHHcCCCCCCCCCeEEEeCChhhCCC-----CC
Confidence 000000 000000000 00001122233222222211 00
Q ss_pred hcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCcCC--------ChhHHHHHHHHHh
Q 039413 235 AKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSICNL--------PSSQLIELGLGLE 306 (363)
Q Consensus 235 ~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~~l--------~~~~~~~~~~~l~ 306 (363)
....++.-. ... . .+.++.+|++..+++.+|||++||.... ..+.+++++++|+
T Consensus 200 ---~~~~~~~~~-~~~--~------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~ 261 (398)
T 4fzr_A 200 ---PGTTKMRYV-PYN--G------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELP 261 (398)
T ss_dssp ---CCCEECCCC-CCC--C------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGG
T ss_pred ---CCCCCeeee-CCC--C------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHH
Confidence 111111100 000 0 1234557776655667999999998642 4567999999999
Q ss_pred hCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCC
Q 039413 307 ASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAV 360 (363)
Q Consensus 307 ~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v 360 (363)
+.+.+++|+...+.. +. + ++..++..++ +|+||.++|+|.++
T Consensus 262 ~~~~~~v~~~~~~~~-~~-----l-----~~~~~~v~~~-~~~~~~~ll~~ad~ 303 (398)
T 4fzr_A 262 KLGFEVVVAVSDKLA-QT-----L-----QPLPEGVLAA-GQFPLSAIMPACDV 303 (398)
T ss_dssp GGTCEEEECCCC-------------------CCTTEEEE-SCCCHHHHGGGCSE
T ss_pred hCCCEEEEEeCCcch-hh-----h-----ccCCCcEEEe-CcCCHHHHHhhCCE
Confidence 999999998765421 11 1 1123344455 89999999998553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.52 E-value=1.9e-13 Score=124.44 Aligned_cols=265 Identities=14% Similarity=0.144 Sum_probs=139.6
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEe-cCCCcc-----CCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEI-QFPWQQ-----AGLPE 80 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~-----~~~~~ 80 (363)
++||+++..++.||+++++.|+++|.+|||+|+++++....+.+.. .++.+..+ ...... ...+.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG---------AGLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH---------BTCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh---------CCCceeeecCCccchhhhhhhcccc
Confidence 3689999999999999999999999999999999987433222221 14666655 211000 00000
Q ss_pred CCCCCCCCCChhHHH-HHHHHHhc-------hHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHHHH
Q 039413 81 GCENCDLLPTTDFAR-FLNSLHML-------QLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCFCL 152 (363)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~~~ 152 (363)
............... +......+ ...+.+++++ .+||+||+|.+..++..+|+++|+|++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~- 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT- 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT-
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc-
Confidence 000000000011111 11111122 4455666666 589999999866677788899999988875321000
Q ss_pred HHHHHhhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhh-----hcCceEEecCccccchh
Q 039413 153 FCLHLLGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAAD-----KKTYGTIINTFEELESP 227 (363)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~nt~~~le~~ 227 (363)
. . .. ............... ...+..+..+-.+++..
T Consensus 149 ---------------------------~-----~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (391)
T 3tsa_A 149 ---------------------------A-----G------PF-SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS 189 (391)
T ss_dssp ---------------------------T-----T------HH-HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT
T ss_pred ---------------------------c-----c------cc-cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC
Confidence 0 0 00 000000011111111 01133444433333321
Q ss_pred HHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccccCCCCCCcEEEEecCCCc---CCChhHHHHHHHH
Q 039413 228 CIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTWLDSQQPTSVVYVCLGSIC---NLPSSQLIELGLG 304 (363)
Q Consensus 228 ~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVIyvsfGS~~---~l~~~~~~~~~~~ 304 (363)
......++..+ |. . .+..+..|+...+++.+||+++||.. ..+.+.++.++++
T Consensus 190 -----~~~~~~~~~~~-p~----~--------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 190 -----DAPQGAPVQYV-PY----N--------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp -----TSCCCEECCCC-CC----C--------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred -----CCCccCCeeee-cC----C--------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 00000011111 10 0 12335578876666789999999984 3447778999999
Q ss_pred HhhC-CCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCC
Q 039413 305 LEAS-NKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPA 359 (363)
Q Consensus 305 l~~~-~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~ 359 (363)
++. +.+|+|+..++.. + . +. ...++..++ +|.||.++|++..
T Consensus 246 -~~~p~~~~v~~~~~~~~-~---~--l~-----~~~~~v~~~-~~~~~~~ll~~ad 288 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPEHR-A---L--LT-----DLPDNARIA-ESVPLNLFLRTCE 288 (391)
T ss_dssp -HTSTTEEEEEECCGGGG-G---G--CT-----TCCTTEEEC-CSCCGGGTGGGCS
T ss_pred -ccCCCeEEEEEECCcch-h---h--cc-----cCCCCEEEe-ccCCHHHHHhhCC
Confidence 887 6789998764321 1 1 21 112344444 8999999996543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.52 E-value=9.6e-13 Score=120.62 Aligned_cols=275 Identities=17% Similarity=0.123 Sum_probs=147.5
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCc----------
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQ---------- 74 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------- 74 (363)
..+++|+++..++.||+++++.|+++|.++||+|+++++......+.. .++++..++....
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 88 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK---------LGFEPVATGMPVFDGFLAALRIR 88 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCCHHHHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh---------cCCceeecCcccccchhhhhhhh
Confidence 457899999999999999999999999999999999998643222221 2467766652000
Q ss_pred --cCCCCCCCCCCCCCCChhHHHHH-HH-HHhchHHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecccHH
Q 039413 75 --QAGLPEGCENCDLLPTTDFARFL-NS-LHMLQLPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEFSCF 150 (363)
Q Consensus 75 --~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~~~~ 150 (363)
....+. ....... ......+ .. .......+.+++++ .+||+||+|....++..+|+++|+|+|........
T Consensus 89 ~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 163 (412)
T 3otg_A 89 FDTDSPEG-LTPEQLS--ELPQIVFGRVIPQRVFDELQPVIER--LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT 163 (412)
T ss_dssp HSCSCCTT-CCHHHHT--TSHHHHHHTHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC
T ss_pred hcccCCcc-CChhHhh--HHHHHHHhccchHHHHHHHHHHHHh--cCCCEEEECchhhHHHHHHHHcCCCEEEecccccC
Confidence 000000 0000000 0111111 11 11223456666665 58999999977767778889999998876433210
Q ss_pred --HHHHH--HHhhccccccCCCCCCCCcCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHhhhcCceEEecCccccch
Q 039413 151 --CLFCL--HLLGVSKVHENVTSDSDYFNIPGLPDHIQFTKVQLPISEQDDDFKELQEQIFAADKKTYGTIINTFEELES 226 (363)
Q Consensus 151 --~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~ 226 (363)
..... ..+.... .--|++. .... ....++.+++.+-.+++.
T Consensus 164 ~~~~~~~~~~~~~~~~------------~~~g~~~--------~~~~---------------~~~~~d~~i~~~~~~~~~ 208 (412)
T 3otg_A 164 PDDLTRSIEEEVRGLA------------QRLGLDL--------PPGR---------------IDGFGNPFIDIFPPSLQE 208 (412)
T ss_dssp CSHHHHHHHHHHHHHH------------HHTTCCC--------CSSC---------------CGGGGCCEEECSCGGGSC
T ss_pred chhhhHHHHHHHHHHH------------HHcCCCC--------Cccc---------------ccCCCCeEEeeCCHHhcC
Confidence 00000 0000000 0000000 0000 012334445544444442
Q ss_pred hHHHHHHhhcCCceEEeCcCCCCCCCCchhhhcCCCCCCCchhhccc-cCCCCCCcEEEEecCCCcCCChhHHHHHHHHH
Q 039413 227 PCIEDYKKAKQEKVWCIGPVSLCNKEPIDKAERGKKASIDVPECLTW-LDSQQPTSVVYVCLGSICNLPSSQLIELGLGL 305 (363)
Q Consensus 227 ~~~~~~~~~~~~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~w-Ld~~~~~sVIyvsfGS~~~l~~~~~~~~~~~l 305 (363)
. .......-.++-+. ... ...+..+| ....+++.+||+++||...-..+.+.+++++|
T Consensus 209 ~-----~~~~~~~~~~~~~~---~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l 267 (412)
T 3otg_A 209 P-----EFRARPRRHELRPV---PFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGL 267 (412)
T ss_dssp H-----HHHTCTTEEECCCC---CCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHH
T ss_pred C-----cccCCCCcceeecc---CCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHH
Confidence 1 11111112222111 000 11234466 33234556999999999766678899999999
Q ss_pred hhCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceEecCchhHHhhhcCCCC
Q 039413 306 EASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLLIRGWAPQVLILSHPAV 360 (363)
Q Consensus 306 ~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vv~~W~PQ~~iL~Hp~v 360 (363)
++.+.+|+|...+....+.+.+ + .++..+. +|.|+.++|++.++
T Consensus 268 ~~~~~~~~~~~g~~~~~~~l~~--~--------~~~v~~~-~~~~~~~~l~~ad~ 311 (412)
T 3otg_A 268 AGLDADVLVASGPSLDVSGLGE--V--------PANVRLE-SWVPQAALLPHVDL 311 (412)
T ss_dssp HTSSSEEEEECCSSCCCTTCCC--C--------CTTEEEE-SCCCHHHHGGGCSE
T ss_pred HcCCCEEEEEECCCCChhhhcc--C--------CCcEEEe-CCCCHHHHHhcCcE
Confidence 9999999998876431111111 2 2334444 89999999998654
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.89 E-value=1e-09 Score=87.42 Aligned_cols=83 Identities=22% Similarity=0.321 Sum_probs=65.4
Q ss_pred CchhhccccCCCCCCcEEEEecCCCc-CCChhHHHHHHHHHhhCCCCeEEEEeCCcchhhhhhccchhhHHHHhCCCceE
Q 039413 266 DVPECLTWLDSQQPTSVVYVCLGSIC-NLPSSQLIELGLGLEASNKPFVWVIRGESKLEELEKWLVEENFKERIKGRGLL 344 (363)
Q Consensus 266 ~~~~~~~wLd~~~~~sVIyvsfGS~~-~l~~~~~~~~~~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v 344 (363)
++.++.+|+++++++++|||+|||.. ..+.+.+.+++++|++.+.+|+|+....... . ++ ++..+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~----~--~~--------~~v~~ 72 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD----T--LG--------LNTRL 72 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT----T--CC--------TTEEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc----c--CC--------CcEEE
Confidence 67899999998777789999999986 5678889999999999999999998654210 1 32 33444
Q ss_pred ecCchhHHhhhcCCCCccC
Q 039413 345 IRGWAPQVLILSHPAVGGC 363 (363)
Q Consensus 345 v~~W~PQ~~iL~Hp~v~~F 363 (363)
+ +|+||.++|+|+++.+|
T Consensus 73 ~-~~~~~~~~l~~~~ad~~ 90 (170)
T 2o6l_A 73 Y-KWIPQNDLLGHPKTRAF 90 (170)
T ss_dssp E-SSCCHHHHHTSTTEEEE
T ss_pred e-cCCCHHHHhcCCCcCEE
Confidence 4 89999999999776543
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.29 E-value=3.9e-06 Score=75.23 Aligned_cols=114 Identities=23% Similarity=0.251 Sum_probs=65.4
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh-h-hHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA-R-FKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCD 86 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~-~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 86 (363)
+|++....+-||++|.+.|+++|.+|||+|+|+++..-.+ . +.. .++.++.++.. +++.. ....
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~---------~g~~~~~i~~~----~~~~~-~~~~ 69 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK---------AGLPLHLIQVS----GLRGK-GLKS 69 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG---------GTCCEEECC----------------
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh---------cCCcEEEEECC----CcCCC-CHHH
Confidence 6777765555999999999999999999999998754321 1 111 14666666531 22110 0000
Q ss_pred CCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCccH--HHHHHHcCCCcEEE
Q 039413 87 LLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFPWT--VDTAAKFNVPRIIF 144 (363)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~~~--~~vA~~~~iP~v~~ 144 (363)
.+...+.....+ ....+++++ .+||+||++..+.+. ...|+.+|+|+|..
T Consensus 70 -----~~~~~~~~~~~~-~~~~~~l~~--~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 70 -----LVKAPLELLKSL-FQALRVIRQ--LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp --------CHHHHHHHH-HHHHHHHHH--HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHHHH-HHHHHHHHh--cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 001111111111 223445665 589999999655433 34567889998865
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.46 E-value=0.001 Score=59.04 Aligned_cols=118 Identities=15% Similarity=0.111 Sum_probs=68.7
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDL 87 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (363)
++|+++.....||..+...|+++|+++||+|++++....... .... ..++++..++.. .+...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~--~~~~-----~~g~~~~~~~~~----~~~~~------ 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEA--DLVP-----KHGIEIDFIRIS----GLRGK------ 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHH--HHGG-----GGTCEEEECCCC----CCTTC------
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchh--hhcc-----ccCCceEEecCC----ccCcC------
Confidence 689999866669999999999999999999999997543211 1110 014666655421 11110
Q ss_pred CCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCc--cHHHHHHHcCCCcEEEe
Q 039413 88 LPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFH 145 (363)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~--~~~~vA~~~~iP~v~~~ 145 (363)
.....+....... .....+.+++++ .++|+|+++.... .+..++...|+|+|...
T Consensus 70 ~~~~~~~~~~~~~-~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 126 (364)
T 1f0k_A 70 GIKALIAAPLRIF-NAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHE 126 (364)
T ss_dssp CHHHHHTCHHHHH-HHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEE
T ss_pred ccHHHHHHHHHHH-HHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEe
Confidence 0000000001111 112334555655 5799999986432 33456778899988653
No 23
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=95.75 E-value=0.13 Score=46.35 Aligned_cols=38 Identities=26% Similarity=0.274 Sum_probs=30.4
Q ss_pred CceEEEEcCC-----CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 7 QSHFLLLPFL-----APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p~p-----~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+++|+++..- .-|--.-+..|+++|+++||+|+++++.
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~ 44 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS 44 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 5688887722 3466667899999999999999999964
No 24
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=95.36 E-value=0.037 Score=51.34 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=31.8
Q ss_pred CCCCCCCceEEEEcC---C------------CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 1 MASEASQSHFLLLPF---L------------APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 1 m~~~~~~~~lv~~p~---p------------~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
|.+..++++|+++.. | .-|.-..+..|+++|+++||+|++++...
T Consensus 1 m~~m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 60 (499)
T 2r60_A 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRI 60 (499)
T ss_dssp ------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CccccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCC
Confidence 433344578888874 2 25677889999999999999999998643
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=93.31 E-value=0.51 Score=41.70 Aligned_cols=110 Identities=12% Similarity=0.076 Sum_probs=64.8
Q ss_pred CCceEEEEcC--C--CCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCC
Q 039413 6 SQSHFLLLPF--L--APGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEG 81 (363)
Q Consensus 6 ~~~~lv~~p~--p--~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 81 (363)
++++|+++.. + .-|.-.-+..|+++| +||+|++++............ ...++.+..++.. ..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-------~~ 68 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRS-------VM 68 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSS-------SC
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccc-------cc
Confidence 3457777753 3 457788888899888 799999999865443211111 1224666665421 00
Q ss_pred CCCCCCCCChhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEecCCCc--cHHHHHHHcCCCcEEEecc
Q 039413 82 CENCDLLPTTDFARFLNSLHMLQLPFENLFERQTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~D~~~~--~~~~vA~~~~iP~v~~~~~ 147 (363)
.. . . .....+.+++++ .++|+|++..... +...++.++++|.+++...
T Consensus 69 ------~~--~-~-------~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h 118 (394)
T 3okp_A 69 ------LP--T-P-------TTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTH 118 (394)
T ss_dssp ------CS--C-H-------HHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECC
T ss_pred ------cc--c-h-------hhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEec
Confidence 00 0 0 112335566666 5799999764433 4556788899996655443
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=91.37 E-value=0.94 Score=39.87 Aligned_cols=37 Identities=14% Similarity=-0.087 Sum_probs=26.5
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPV 45 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~ 45 (363)
++|+++... .+....+..|+++|.++ ||+|.++++..
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~ 43 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQ 43 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSS
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCC
Confidence 578777632 33455678899999998 89988876643
No 27
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=90.03 E-value=1.7 Score=38.38 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=30.7
Q ss_pred CceEEEEcCCC-CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 7 QSHFLLLPFLA-PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 7 ~~~lv~~p~p~-~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
++.+....+|. -|.-.-...|+++|+++||+|++++...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 54 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGL 54 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 34577777775 4677888999999999999999998743
No 28
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=87.71 E-value=2.2 Score=37.48 Aligned_cols=35 Identities=17% Similarity=0.048 Sum_probs=26.5
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCC-EEEEEeCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGA-IVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh-~VT~~t~~ 44 (363)
+|+++. ...++...+.+|+++|.++|+ ++.++.+.
T Consensus 2 kIl~v~-~~~~~~~~~~~l~~~L~~~g~~~~~v~~~~ 37 (384)
T 1vgv_A 2 KVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTA 37 (384)
T ss_dssp EEEEEE-CSHHHHHHHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEe-cccHHHHHHHHHHHHHHhCCCCceEEEEcC
Confidence 566664 335778888999999999995 88876553
No 29
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=87.27 E-value=0.68 Score=41.71 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=32.5
Q ss_pred CCceEEEEcC---C--------CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 6 SQSHFLLLPF---L--------APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 6 ~~~~lv~~p~---p--------~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.+++|+++.. | .-|+-..+..|+++|+++||+|++++...
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 69 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRAT 69 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCC
Confidence 4678998884 2 35888999999999999999999998754
No 30
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=86.30 E-value=0.78 Score=39.79 Aligned_cols=28 Identities=18% Similarity=0.097 Sum_probs=24.4
Q ss_pred CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 18 PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 18 ~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.|.-.-...++++|.++||+|++++...
T Consensus 30 gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 5677889999999999999999998753
No 31
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=85.08 E-value=1.4 Score=43.36 Aligned_cols=39 Identities=21% Similarity=0.071 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCCCcEEEecCCCc--cHHHHHHHcCCCcEEE
Q 039413 106 PFENLFERQTLKPCCIISDMCFP--WTVDTAAKFNVPRIIF 144 (363)
Q Consensus 106 ~~~~ll~~~~~~~d~vI~D~~~~--~~~~vA~~~~iP~v~~ 144 (363)
.+..+++....+||+|.+-.... .+..+|+++|+|.|..
T Consensus 396 ~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T 436 (816)
T 3s28_A 396 AAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTI 436 (816)
T ss_dssp HHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEE
Confidence 34445554345799998753222 3456788899998754
No 32
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.79 E-value=0.93 Score=37.62 Aligned_cols=38 Identities=21% Similarity=0.113 Sum_probs=24.7
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
||++.-==+. +---+..|+++|.+.| +|+++.+....+
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~S 40 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCc
Confidence 4554442222 2345778889998888 599998876554
No 33
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=84.24 E-value=1.2 Score=41.58 Aligned_cols=41 Identities=10% Similarity=0.051 Sum_probs=31.0
Q ss_pred CCCceEEEEcC---C---CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 5 ASQSHFLLLPF---L---APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 5 ~~~~~lv~~p~---p---~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
..++||+++.. | .-|=-...-.|.++|+++||+|+++++.+
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 35789999963 3 23444677899999999999999999643
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=83.51 E-value=6.9 Score=34.03 Aligned_cols=39 Identities=10% Similarity=-0.014 Sum_probs=29.5
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhC-C-CEEEEEeCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQR-G-AIVTIVTTPVN 46 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~r-G-h~VT~~t~~~~ 46 (363)
+++|+++. ...++......++++|.++ | |+|+++++...
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~ 48 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQH 48 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCC
Confidence 46888876 3467788889999999987 5 88887776543
No 35
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=83.26 E-value=0.86 Score=41.03 Aligned_cols=41 Identities=12% Similarity=0.053 Sum_probs=29.3
Q ss_pred CCCceEEEEcCC-CC----CCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 5 ASQSHFLLLPFL-AP----GHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 5 ~~~~~lv~~p~p-~~----gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
..+++|+++.-. .. |=...+..++++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 345677766622 22 323458899999999999999999853
No 36
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=82.21 E-value=5.1 Score=35.78 Aligned_cols=38 Identities=16% Similarity=0.044 Sum_probs=28.6
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTP 44 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~ 44 (363)
++++|+++. ...+.++=+.+|.++|.++ |+++.++.+.
T Consensus 26 ~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG 65 (403)
T 3ot5_A 26 AKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITA 65 (403)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC
T ss_pred ccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEec
Confidence 345777665 5667788889999999988 6888766664
No 37
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=81.58 E-value=6.8 Score=34.84 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=29.8
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPVN 46 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~~ 46 (363)
++++|+++. ...+.++-+.+|.++|.++ |+++.++.+-..
T Consensus 24 ~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h 64 (396)
T 3dzc_A 24 AMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQH 64 (396)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSS
T ss_pred CCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEeccc
Confidence 345666655 6777889999999999987 788876666443
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=81.48 E-value=3.4 Score=36.73 Aligned_cols=108 Identities=16% Similarity=0.110 Sum_probs=58.8
Q ss_pred EEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh-hhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCCCCCCCC
Q 039413 12 LLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA-RFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCENCDLLPT 90 (363)
Q Consensus 12 ~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (363)
++-+.++--++=|.++.++|.++ ++..++.|..+.. .+..... +. +. ++-+.. .+.. ++...
T Consensus 13 ~~v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~~--~~---i~~~~~--~l~~-----~~~~~ 75 (385)
T 4hwg_A 13 MTIVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----DD--MG---IRKPDY--FLEV-----AADNT 75 (385)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C---CC---CCCCSE--ECCC-----CCCCS
T ss_pred eEEEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----hh--CC---CCCCce--ecCC-----CCCCH
Confidence 34457888899999999999887 9988887754322 1222110 11 11 111100 0111 00011
Q ss_pred hhHHHHHHHHHhchHHHHHHHHhCCCCCcEEEe--cCCCccHHHHHHHcCCCcEEE
Q 039413 91 TDFARFLNSLHMLQLPFENLFERQTLKPCCIIS--DMCFPWTVDTAAKFNVPRIIF 144 (363)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~d~vI~--D~~~~~~~~vA~~~~iP~v~~ 144 (363)
..........+++++++ .+||+|++ |....++...|.+.|||++.+
T Consensus 76 ------~~~~~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 76 ------AKSIGLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp ------HHHHHHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 11112233456667766 57998875 444556666778899997655
No 39
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=81.18 E-value=1.3 Score=38.82 Aligned_cols=36 Identities=22% Similarity=0.186 Sum_probs=28.9
Q ss_pred eEEEEc---CCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLP---FLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p---~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+|+++. .|.-|.-.-+..++++|+++||+|++++..
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 40 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQS 40 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESE
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecC
Confidence 455553 245677888999999999999999999874
No 40
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=79.47 E-value=2.9 Score=37.23 Aligned_cols=41 Identities=12% Similarity=0.019 Sum_probs=32.0
Q ss_pred CCceEEEEc-CC-CCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 6 SQSHFLLLP-FL-APGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 6 ~~~~lv~~p-~p-~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
++++|+++. .+ .-|+-..+..|+++|.++||+|++++....
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 456776665 33 358889999999999999999999887543
No 41
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=78.03 E-value=2.6 Score=37.20 Aligned_cols=41 Identities=15% Similarity=0.129 Sum_probs=31.1
Q ss_pred CCceEEEEcC---CC-CCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 6 SQSHFLLLPF---LA-PGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 6 ~~~~lv~~p~---p~-~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
++++|+++.. +. .|+-.-+..++++|+++||+|++++....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 63 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASP 63 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCT
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCc
Confidence 4668887762 22 46668899999999999999999987543
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=75.36 E-value=2.6 Score=38.54 Aligned_cols=37 Identities=8% Similarity=-0.077 Sum_probs=27.6
Q ss_pred ceEEEEcC---C---CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 8 SHFLLLPF---L---APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 8 ~~lv~~p~---p---~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
++|+++.. | .-|=-.-...|+++|+++||+|+++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPA 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 36666653 2 2344567789999999999999999874
No 43
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=75.34 E-value=2.9 Score=34.50 Aligned_cols=39 Identities=21% Similarity=0.113 Sum_probs=27.0
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
+||++.-==+. |---+..|+++|.+.| +|+++.+....+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~S 40 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCcc
Confidence 35555443232 4456788999999988 999999876654
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=75.26 E-value=2.8 Score=38.25 Aligned_cols=36 Identities=11% Similarity=-0.027 Sum_probs=27.6
Q ss_pred eEEEEcC---C---CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPF---L---APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~---p---~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+|+++.. | .-|=-.-+..|+++|+++||+|+++++.
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPG 43 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 6666653 2 2345577889999999999999999874
No 45
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=70.27 E-value=9.6 Score=27.93 Aligned_cols=35 Identities=11% Similarity=0.152 Sum_probs=25.3
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-------CCCcEEEecccHH
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHEFSCF 150 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-------~iP~v~~~~~~~~ 150 (363)
.+||+||+|..++ -+..+++++ ++|+|.+++.+-.
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~ 99 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKR 99 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCH
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCH
Confidence 4799999999886 456666543 4788888776533
No 46
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=66.48 E-value=10 Score=27.86 Aligned_cols=38 Identities=11% Similarity=-0.026 Sum_probs=33.7
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+.++++...++-.|-+...-++..|..+|++|..+-..
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 45899999999999999999999999999999987554
No 47
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=65.42 E-value=21 Score=30.61 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=34.1
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCChh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNAA 48 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~ 48 (363)
+|+++-..+-|.+.-..++.++|.++ +.+|++++.+...+
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~ 43 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRP 43 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHH
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhH
Confidence 78888877789999999999999987 99999999864443
No 48
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=63.70 E-value=9.3 Score=28.50 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=25.8
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+.|++++- .|++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 44788884 35544 78999999999999999863
No 49
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=63.03 E-value=11 Score=28.04 Aligned_cols=45 Identities=22% Similarity=0.350 Sum_probs=29.3
Q ss_pred CCCCCCCceEEEEcCC-CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 1 MASEASQSHFLLLPFL-APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p-~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
|.+++.+.-++++.=| ....+-..+-++..|-++||+||+..++.
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npA 46 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPA 46 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHH
Confidence 4444333345555555 45667778889999999999999988753
No 50
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=62.64 E-value=11 Score=31.81 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=21.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 17 APGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 17 ~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
+.||+.=.+.||++|. +|+|++...
T Consensus 14 G~GHvmRcl~LA~~l~----~v~F~~~~~ 38 (282)
T 3hbm_A 14 GFGHIKRDLVLAKQYS----DVSFACLPL 38 (282)
T ss_dssp BSHHHHHHHHHHTTCS----SEEEEECCC
T ss_pred cccHHHHHHHHHHHHH----hCEEEEecC
Confidence 6799999999999998 799998643
No 51
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=61.61 E-value=10 Score=27.29 Aligned_cols=31 Identities=23% Similarity=0.012 Sum_probs=21.9
Q ss_pred CCCcEEEecCCCc--cHHHHHHH---cCCCcEEEec
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK---FNVPRIIFHE 146 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~---~~iP~v~~~~ 146 (363)
.+||+||+|..++ -+..++++ .++|+|.++.
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 5899999998886 34555543 4788776654
No 52
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=61.43 E-value=54 Score=25.31 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=28.1
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 15 FLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 15 ~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
-.+-|=..-...||..|+++|++|.++-.+...
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~ 42 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTDPQM 42 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 456788899999999999999999999876543
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=61.27 E-value=30 Score=29.99 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=37.7
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCChhh
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNAAR 49 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~~ 49 (363)
+..+|+++-..+-|.+.-..++.+.|.++ +.+||+++.+...+.
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l 52 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQV 52 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGG
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHH
Confidence 34589999999999999999999999987 899999998655443
No 54
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=60.73 E-value=59 Score=25.53 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=35.3
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
++..|+++.-++.|=..-.+.++.+.+.+|.+|-|+..-.
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~K 66 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 66 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeC
Confidence 4557999999999999999999999999999999996543
No 55
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=60.18 E-value=9.2 Score=29.09 Aligned_cols=39 Identities=21% Similarity=0.077 Sum_probs=34.8
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
++.++++...++-.|-+...-++..|...|++|.++-..
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467899999999999999999999999999999987544
No 56
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=59.14 E-value=19 Score=28.61 Aligned_cols=44 Identities=18% Similarity=0.086 Sum_probs=37.2
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAAR 49 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~ 49 (363)
.+.++++.+.++..|-+...-++..|..+|++|.++-.....+.
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~ 130 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGK 130 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 35589999999999999999999999999999998876544333
No 57
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=57.81 E-value=17 Score=30.02 Aligned_cols=39 Identities=15% Similarity=-0.025 Sum_probs=35.1
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.+.++++.+.++..|-+...-++..|..+|++|.++-..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 466899999999999999999999999999999988653
No 58
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=57.11 E-value=53 Score=27.18 Aligned_cols=41 Identities=17% Similarity=0.109 Sum_probs=32.6
Q ss_pred CceEEEEc--CCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 7 QSHFLLLP--FLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 7 ~~~lv~~p--~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
+.+++++. -++-|=..-...||..|+++|.+|-++-.+...
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~ 123 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRK 123 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34555554 467899999999999999999999999876443
No 59
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=53.91 E-value=18 Score=28.93 Aligned_cols=38 Identities=13% Similarity=0.063 Sum_probs=30.4
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
+.+|++.-..+.+-+. ...|.++|.++| +|+++.++.-
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A 56 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSS 56 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchH
Confidence 4577777777777665 889999999999 9999988643
No 60
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=53.85 E-value=13 Score=28.21 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=22.4
Q ss_pred EEEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 282 VVYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 282 VIyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
+.|+|+||+..-+.+.++.-...|++.+
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999998767777888888887654
No 61
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=53.69 E-value=24 Score=34.27 Aligned_cols=43 Identities=16% Similarity=0.315 Sum_probs=38.9
Q ss_pred CCCcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEeCCc
Q 039413 278 QPTSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGES 320 (363)
Q Consensus 278 ~~~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~~~~ 320 (363)
+++.|+|.||.+..-++++.++.-++-|++.+..+||-++.+.
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~ 562 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA 562 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH
Confidence 4567999999999999999999999999999999999988653
No 62
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=51.61 E-value=28 Score=24.21 Aligned_cols=34 Identities=18% Similarity=0.311 Sum_probs=23.5
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-------CCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-------~iP~v~~~~~~~ 149 (363)
.+||+||.|..++ .+..+.+++ ++|+|.++....
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 5799999998775 345555543 478888776543
No 63
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=50.93 E-value=11 Score=28.63 Aligned_cols=28 Identities=29% Similarity=0.334 Sum_probs=24.0
Q ss_pred EEEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 282 VVYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 282 VIyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
.+|+|+||+..-+.+.++.-...|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999999878888988888888764
No 64
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=50.50 E-value=44 Score=29.75 Aligned_cols=33 Identities=18% Similarity=0.393 Sum_probs=21.9
Q ss_pred HHHHHHhCCCCCcEEEe--cCCCccHHHHHHHcCCCc
Q 039413 107 FENLFERQTLKPCCIIS--DMCFPWTVDTAAKFNVPR 141 (363)
Q Consensus 107 ~~~ll~~~~~~~d~vI~--D~~~~~~~~vA~~~~iP~ 141 (363)
+.++.++ .++|.|++ |.....+..+|+++|+|.
T Consensus 67 ~~~~~~~--~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 67 VRQTFVE--FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHH--SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHhhhh--cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 4455555 57899884 333345567889999983
No 65
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=50.19 E-value=11 Score=31.71 Aligned_cols=32 Identities=28% Similarity=0.345 Sum_probs=23.1
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+|+|.- +.|.+ -.+|+++|.++||+|+.++-.
T Consensus 2 kILVTG--atGfI--G~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 2 RVLVGG--GTGFI--GTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 454443 44543 467899999999999998753
No 66
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=49.67 E-value=29 Score=27.61 Aligned_cols=37 Identities=16% Similarity=0.043 Sum_probs=29.3
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.+|++--..+-|-+. ...|.++|.++|++|.++.++.
T Consensus 5 k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~ 41 (209)
T 3zqu_A 5 ERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKA 41 (209)
T ss_dssp SEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECcc
Confidence 467666666666555 8899999999999999998854
No 67
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=49.63 E-value=24 Score=28.27 Aligned_cols=44 Identities=11% Similarity=-0.036 Sum_probs=36.9
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAAR 49 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~ 49 (363)
++.++++.+.++-.|-+...-++..|..+|++|..+-..-..+.
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 134 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNEN 134 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHH
Confidence 46789999999999999999999999999999998865444333
No 68
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=49.60 E-value=13 Score=30.10 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=26.7
Q ss_pred HHHHHHHHhCCCCCcEEEecCCCcc---HHH----HHHHcCCCcEEEec
Q 039413 105 LPFENLFERQTLKPCCIISDMCFPW---TVD----TAAKFNVPRIIFHE 146 (363)
Q Consensus 105 ~~~~~ll~~~~~~~d~vI~D~~~~~---~~~----vA~~~~iP~v~~~~ 146 (363)
+.+.++++++..++|+|++|-.... ..+ +...+++|.|++.=
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 3444555665567999999976542 233 44455788888753
No 69
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=49.51 E-value=13 Score=33.01 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=25.3
Q ss_pred CCceEEEEc---CCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 6 SQSHFLLLP---FLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 6 ~~~~lv~~p---~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.+++|+++. +| .+.-.....++++|+++| +||+++..
T Consensus 13 ~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 13 RRPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CCSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CCceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 356788776 45 232223456788999999 99999653
No 70
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=47.66 E-value=33 Score=24.97 Aligned_cols=36 Identities=8% Similarity=-0.076 Sum_probs=25.0
Q ss_pred eEEEEc-CC--CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLP-FL--APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p-~p--~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+++++- .+ +.......+.+|...++.||+|+++-+.
T Consensus 17 kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 17 XILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp EEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred eEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 444443 33 3456667778888888999999987664
No 71
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=47.31 E-value=39 Score=31.95 Aligned_cols=71 Identities=14% Similarity=0.053 Sum_probs=47.1
Q ss_pred CcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEE-eC-CcchhhhhhccchhhH-HHHhCCCceEecCchhHHhhh
Q 039413 280 TSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVI-RG-ESKLEELEKWLVEENF-KERIKGRGLLIRGWAPQVLIL 355 (363)
Q Consensus 280 ~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~-~~-~~~~~~~~~~~lp~~~-~~~~~~~~~vv~~W~PQ~~iL 355 (363)
+.|+|.||+....+.++.++..++-+++.+..+||.+ -+ ..... .. +-..+ ...+.++..+. +..|+.+.|
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~--~~--~~~~~~~~GI~~Rv~F~-g~~p~~e~l 513 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGIT--HP--YVERFIKSYLGDSATAH-PHSPYHQYL 513 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGG--HH--HHHHHHHHHHGGGEEEE-CCCCHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhh--HH--HHHHHHHcCCCccEEEc-CCCCHHHHH
Confidence 4799999999988999999999999999999999864 22 11110 01 11111 12234454444 788887766
No 72
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=46.93 E-value=19 Score=27.22 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=23.4
Q ss_pred EEEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 282 VVYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 282 VIyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
.+|+|+||+..-+.+.++.-...|++.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999999767788888888888764
No 73
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=46.09 E-value=29 Score=24.79 Aligned_cols=32 Identities=13% Similarity=0.299 Sum_probs=23.9
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.++++++- .|.+ -..+++.|.++||+|+++..
T Consensus 4 ~m~i~IiG---~G~i--G~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAG---IGRV--GYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEEC---CSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEC---CCHH--HHHHHHHHHhCCCeEEEEEC
Confidence 35788773 3655 45688999999999999865
No 74
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=45.95 E-value=38 Score=27.40 Aligned_cols=41 Identities=15% Similarity=0.134 Sum_probs=35.8
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
.+..|++..-|+-|=..-++.++.+|+++|+.|.++..+.+
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q 45 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVETH 45 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCT
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 45678888889999999999999999999999998887653
No 75
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=45.74 E-value=25 Score=28.40 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=27.4
Q ss_pred CCcEEEEecCCCcCCChhHHH-----HHHHHHhhCC-CCeEEEEeCC
Q 039413 279 PTSVVYVCLGSICNLPSSQLI-----ELGLGLEASN-KPFVWVIRGE 319 (363)
Q Consensus 279 ~~sVIyvsfGS~~~l~~~~~~-----~~~~~l~~~~-~~flW~~~~~ 319 (363)
++.+|||+.||...+. +.+. +++.+|.+.+ .+++|.+...
T Consensus 27 ~~~~VlVtgGS~~~~n-~li~~vl~~~~l~~L~~~~~~~vv~q~G~~ 72 (224)
T 2jzc_A 27 EEKALFVTCGATVPFP-KLVSCVLSDEFCQELIQYGFVRLIIQFGRN 72 (224)
T ss_dssp CSCCEEEECCSCCSCH-HHHHHHTSHHHHHHHHTTTCCCEEECCCSS
T ss_pred CCCEEEEEcCCchHHH-HHHHHHHHHHHHHHHhcCCCeEEEEEECCC
Confidence 3458999999974332 3233 3348888877 6899988754
No 76
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=44.72 E-value=46 Score=23.60 Aligned_cols=33 Identities=15% Similarity=0.280 Sum_probs=22.4
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-------CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-------~iP~v~~~~~~ 148 (363)
.+||+||.|..++ .+..+.+++ ++|+|+++...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 4799999998775 344444432 57888777654
No 77
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=44.17 E-value=22 Score=28.00 Aligned_cols=38 Identities=8% Similarity=-0.061 Sum_probs=28.1
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
..+|++.-..+.+=+ =...+.++|.++|++|.++.++.
T Consensus 8 ~k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 45 (194)
T 1p3y_1 8 DKKLLIGICGSISSV-GISSYLLYFKSFFKEIRVVMTKT 45 (194)
T ss_dssp GCEEEEEECSCGGGG-GTHHHHHHHTTTSSEEEEEECHH
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchh
Confidence 346666555554444 47899999999999999998853
No 78
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=44.06 E-value=37 Score=23.44 Aligned_cols=33 Identities=27% Similarity=0.536 Sum_probs=22.4
Q ss_pred CCCcEEEecCCCcc--HHHHHH----HcCCCcEEEeccc
Q 039413 116 LKPCCIISDMCFPW--TVDTAA----KFNVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~~--~~~vA~----~~~iP~v~~~~~~ 148 (363)
.+||+||.|..++. +..+.+ ..++|.|.++...
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 57999999987753 333433 3468888777654
No 79
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=44.01 E-value=36 Score=24.53 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=22.4
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc---------CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF---------NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~---------~iP~v~~~~~~ 148 (363)
.+||+||.|..++ .+..+.+++ .+|+|+++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 5799999998765 345555433 26877777654
No 80
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=43.83 E-value=22 Score=26.38 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=25.7
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
....+++++- .|.+ -..+++.|.++|++|+++...
T Consensus 17 ~~~~~v~IiG---~G~i--G~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 17 QKSKYIVIFG---CGRL--GSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCCEEEEEC---CSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCcEEEEC---CCHH--HHHHHHHHHhCCCeEEEEECC
Confidence 3456888885 3544 356889999999999998753
No 81
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=43.74 E-value=19 Score=29.24 Aligned_cols=22 Identities=23% Similarity=0.055 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCCEEEEEeCC
Q 039413 23 PMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~~ 44 (363)
.-..+|++|++||++||+++.+
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHCCCEEEEEeCC
Confidence 4567899999999999999875
No 82
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=43.48 E-value=21 Score=27.08 Aligned_cols=28 Identities=29% Similarity=0.337 Sum_probs=23.1
Q ss_pred EEEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 282 VVYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 282 VIyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
-+|+|+||+..-+.+.++.-...|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 4899999999767788888888888754
No 83
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=43.21 E-value=34 Score=26.36 Aligned_cols=38 Identities=11% Similarity=0.010 Sum_probs=28.3
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
||++.-..+.+ ..=...+.++|.++|++|+++.++.-.
T Consensus 7 ~IllgvTGs~a-a~k~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 7 NVLICLCGSVN-SINISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp EEEEEECSSGG-GGGHHHHHHHHTTTCSEEEEEECTGGG
T ss_pred EEEEEEeCHHH-HHHHHHHHHHHHHCCCEEEEEECcCHH
Confidence 66655555544 445889999999999999999886443
No 84
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=42.95 E-value=21 Score=27.09 Aligned_cols=28 Identities=29% Similarity=0.151 Sum_probs=23.1
Q ss_pred EEEEecCCCcCCChhHHHHHHHHHhhCC
Q 039413 282 VVYVCLGSICNLPSSQLIELGLGLEASN 309 (363)
Q Consensus 282 VIyvsfGS~~~l~~~~~~~~~~~l~~~~ 309 (363)
.+|+|+||+..-+.+.++.-...|++.+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5999999999767788888888887754
No 85
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=42.42 E-value=29 Score=28.34 Aligned_cols=33 Identities=9% Similarity=0.039 Sum_probs=26.7
Q ss_pred EEEEcC-CCCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 10 FLLLPF-LAPGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 10 lv~~p~-p~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
+++... ..-|=....+.|++.|.++|.+|.++-
T Consensus 24 i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 24 LFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 444443 466889999999999999999999985
No 86
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=40.98 E-value=44 Score=27.09 Aligned_cols=42 Identities=12% Similarity=0.060 Sum_probs=26.7
Q ss_pred HHHHHHHHhCCCCCcEEEecCCCc-----c--HHHHHHHcCCCcEEEec
Q 039413 105 LPFENLFERQTLKPCCIISDMCFP-----W--TVDTAAKFNVPRIIFHE 146 (363)
Q Consensus 105 ~~~~~ll~~~~~~~d~vI~D~~~~-----~--~~~vA~~~~iP~v~~~~ 146 (363)
+.+.++++++..++|+|++|-... + +.-+.-.+|+|.|++.=
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 143 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAK 143 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEES
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeec
Confidence 344455555556799999997653 2 22344556788888743
No 87
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=39.92 E-value=30 Score=25.00 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=25.4
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.|++++-. |. --..+++.|.++||+|+++..
T Consensus 6 ~~~v~I~G~---G~--iG~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGS---EA--AGVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECC---SH--HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECC---CH--HHHHHHHHHHHCCCeEEEEEC
Confidence 447888864 55 467899999999999998865
No 88
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=39.59 E-value=45 Score=26.26 Aligned_cols=37 Identities=11% Similarity=-0.033 Sum_probs=27.6
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhC-CCEEEEEeCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQR-GAIVTIVTTPVN 46 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~r-Gh~VT~~t~~~~ 46 (363)
+|++--..+.|-+ =...+.++|.++ |++|+++.|+.-
T Consensus 2 ~IllgvTGsiaa~-k~~~ll~~L~~~~g~~V~vv~T~~A 39 (197)
T 1sbz_A 2 KLIVGMTGATGAP-LGVALLQALREMPNVETHLVMSKWA 39 (197)
T ss_dssp EEEEEECSSSCHH-HHHHHHHHHHTCTTCEEEEEECHHH
T ss_pred EEEEEEeChHHHH-HHHHHHHHHHhccCCEEEEEECchH
Confidence 5555555555554 489999999999 999999988543
No 89
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=39.38 E-value=66 Score=22.35 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=22.2
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-------CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-------~iP~v~~~~~~ 148 (363)
.++|+||.|..++ .+..+++++ ++|+|.++...
T Consensus 50 ~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 50 ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 4699999998775 345555432 46888777654
No 90
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=39.31 E-value=1.2e+02 Score=24.22 Aligned_cols=36 Identities=8% Similarity=-0.062 Sum_probs=25.4
Q ss_pred eEEEEcCC-CCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 9 HFLLLPFL-APGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 9 ~lv~~p~p-~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.|-++.-+ +.|=..-++..++++..+|.+|-++++.
T Consensus 29 ~I~vitG~M~sGKTT~Llr~~~r~~~~g~kvli~kp~ 65 (219)
T 3e2i_A 29 WIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPA 65 (219)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCceEEEEec
Confidence 45555554 5666677777888888888888777654
No 91
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=39.15 E-value=37 Score=26.87 Aligned_cols=37 Identities=19% Similarity=0.028 Sum_probs=28.6
Q ss_pred ceEEEEcCCCCCCHH-HHHHHHHHHHhCCCEEEEEeCCC
Q 039413 8 SHFLLLPFLAPGHMI-PMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~-p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.+|++--..+ +... =...+.++|.++|++|+++.++.
T Consensus 8 k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 8 KHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp CEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 4666555454 5555 78999999999999999998754
No 92
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=39.05 E-value=43 Score=27.69 Aligned_cols=42 Identities=19% Similarity=0.032 Sum_probs=29.9
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
+++++|++.-==+. |---+..|+++|.+ +|+|+++.+....+
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 45678887764444 45567888888877 89999999876654
No 93
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=38.00 E-value=40 Score=24.90 Aligned_cols=34 Identities=15% Similarity=0.013 Sum_probs=25.1
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 11 LLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 11 v~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+++.....-...+.+.+|...++.|++|+++-+.
T Consensus 12 II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 12 IIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 3333334566678888888888999999998774
No 94
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=37.57 E-value=31 Score=25.31 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=28.0
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
.+++++. +-.=+.|++.+++.|.++|.+|+++ ....
T Consensus 19 ~~~llIa--GG~GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIG--AYTGIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEE--ETTHHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEE--CcCcHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 3566665 3445889999999999999999998 6543
No 95
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=36.96 E-value=19 Score=29.07 Aligned_cols=18 Identities=22% Similarity=0.298 Sum_probs=16.3
Q ss_pred HHHHHHHHHhCCCEEEEE
Q 039413 24 MFDTARLLAQRGAIVTIV 41 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~ 41 (363)
-+.+|..|+++|++||++
T Consensus 14 GL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 14 GLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCCEEEE
Confidence 477899999999999998
No 96
>2llz_A Uncharacterized protein YJDK; RNAse, biofilm, unknown function; NMR {Escherichia coli}
Probab=36.08 E-value=20 Score=24.40 Aligned_cols=23 Identities=13% Similarity=-0.000 Sum_probs=19.0
Q ss_pred ecCCCcCCChhHHHHHHHHHhhC
Q 039413 286 CLGSICNLPSSQLIELGLGLEAS 308 (363)
Q Consensus 286 sfGS~~~l~~~~~~~~~~~l~~~ 308 (363)
|||=+..++++++++++.+|.++
T Consensus 56 sFgliS~l~~~ev~~La~~L~e~ 78 (100)
T 2llz_A 56 SFAITTSLAASEIEDLIRLKCLD 78 (100)
T ss_dssp EEEECCCSCHHHHHHHHHHGGGT
T ss_pred ceeeeccCCHHHHHHHHHHHHHh
Confidence 45556789999999999999864
No 97
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=35.66 E-value=49 Score=27.34 Aligned_cols=39 Identities=21% Similarity=0.425 Sum_probs=31.7
Q ss_pred CcEEEEecCCCcCCChhHHHHHHHHHhhC--CCCeEEEEeC
Q 039413 280 TSVVYVCLGSICNLPSSQLIELGLGLEAS--NKPFVWVIRG 318 (363)
Q Consensus 280 ~sVIyvsfGS~~~l~~~~~~~~~~~l~~~--~~~flW~~~~ 318 (363)
.+++.++|||-..-..+.++.+++.+++. ..+|-|.+..
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 46999999998766667889999888763 4689999875
No 98
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=35.01 E-value=79 Score=22.27 Aligned_cols=33 Identities=12% Similarity=0.264 Sum_probs=21.6
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-------CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-------~iP~v~~~~~~ 148 (363)
.+||+||.|..++ .+..+.+.+ ++|+|.++...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 87 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKP 87 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCC
Confidence 4799999998764 344444432 46777776543
No 99
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=34.62 E-value=52 Score=27.14 Aligned_cols=31 Identities=29% Similarity=0.275 Sum_probs=24.2
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
++|++.- + | .--..|+++|+++||+|+.++-
T Consensus 4 ~~ilVtG--a-G--~iG~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAG--C-G--DLGLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp CCEEEEC--C-S--HHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEC--C-C--HHHHHHHHHHHHCCCEEEEEeC
Confidence 3677664 4 6 4567899999999999999875
No 100
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=34.46 E-value=67 Score=25.04 Aligned_cols=36 Identities=17% Similarity=0.060 Sum_probs=29.1
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
||++.-..+.|-+ =...+.++|.++|++|+++.++.
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChh
Confidence 6777766777755 57889999999999999998854
No 101
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=34.45 E-value=65 Score=26.38 Aligned_cols=122 Identities=10% Similarity=0.009 Sum_probs=64.1
Q ss_pred EEEEcC-CCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC-----hhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCC
Q 039413 10 FLLLPF-LAPGHMIPMFDTARLLAQRGAIVTIVTTPVN-----AARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCE 83 (363)
Q Consensus 10 lv~~p~-p~~gH~~p~l~La~~La~rGh~VT~~t~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 83 (363)
+++... ..-|=....+.|++.|.++|.+|.++-+-.. ..... ..... .+.......+.+ ...
T Consensus 29 i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~-~~~~~--~g~~~~~~~~~~-------~~p-- 96 (251)
T 3fgn_A 29 LVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLA-EVGRL--AGVTQLAGLARY-------PQP-- 96 (251)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHH-HHHHH--HCCCEEEEEEEC-------SSS--
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHH-HHHHH--cCCCCCCCCeeE-------CCC--
Confidence 444443 3568899999999999999999998853100 01111 11110 010111111111 100
Q ss_pred CCCCCCChhHHHHHHHH-HhchHHHHHHHHhCCCCCcEEEecCCCc----------cHHHHHHHcCCCcEEEeccc
Q 039413 84 NCDLLPTTDFARFLNSL-HMLQLPFENLFERQTLKPCCIISDMCFP----------WTVDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 84 ~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~d~vI~D~~~~----------~~~~vA~~~~iP~v~~~~~~ 148 (363)
.. .......+.. ....+.+.+.+++...++|+||.|.-.. ...++|+.++.|+|.+....
T Consensus 97 ----~s-P~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 97 ----MA-PAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp ----SC-HHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred ----CC-hHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 00 0110000000 0123456666665556799999996422 23579999999999887664
No 102
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=33.81 E-value=49 Score=26.29 Aligned_cols=36 Identities=14% Similarity=-0.068 Sum_probs=26.5
Q ss_pred eEEEEcCCCCCCHHH-HHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLPFLAPGHMIP-MFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p-~l~La~~La~rGh~VT~~t~~~ 45 (363)
+|++--..+ +...- ...+.++|.++|++|+++.|+.
T Consensus 7 ~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 7 RIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp EEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred EEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 665554444 44444 7899999999999999998864
No 103
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=33.68 E-value=38 Score=28.96 Aligned_cols=33 Identities=15% Similarity=0.051 Sum_probs=26.2
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
..|+.++-..+.| |..+|+.|+++|++|+..-.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4478888776655 66799999999999998754
No 104
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=33.04 E-value=38 Score=29.65 Aligned_cols=36 Identities=8% Similarity=0.026 Sum_probs=26.3
Q ss_pred eEEEEc--CCC-CCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLP--FLA-PGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p--~p~-~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
+|+++. +|. -|--.-...|+++|+++ |+|++++...
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 555553 232 45567788999999999 9999998643
No 105
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=32.59 E-value=27 Score=29.84 Aligned_cols=23 Identities=13% Similarity=-0.035 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCC
Q 039413 23 PMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~~~ 45 (363)
.-..+|+++++||++||+++.+.
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHHCCCEEEEEecCC
Confidence 45678999999999999998754
No 106
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=32.50 E-value=1.2e+02 Score=22.68 Aligned_cols=32 Identities=9% Similarity=0.067 Sum_probs=21.3
Q ss_pred EEEecCCCcCCChhHHHHHHHHHhhCC-CCeEEEE
Q 039413 283 VYVCLGSICNLPSSQLIELGLGLEASN-KPFVWVI 316 (363)
Q Consensus 283 IyvsfGS~~~l~~~~~~~~~~~l~~~~-~~flW~~ 316 (363)
+++..|+.. +.+.+..+++++++++ .++++.=
T Consensus 25 ~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G 57 (177)
T 2f9f_A 25 FWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVG 57 (177)
T ss_dssp CEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEB
T ss_pred EEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEe
Confidence 455667765 3456888899998874 4565543
No 107
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=32.23 E-value=80 Score=22.86 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=21.9
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-------cCCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-------~~iP~v~~~~~~ 148 (363)
.+||+||.|..++ .+..+++. -++|+|+++...
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 5799999998764 34444432 257888777654
No 108
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=31.89 E-value=59 Score=27.32 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=24.1
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
+|+|+- +.|.+ -.+++++|+++||+|+.++-..
T Consensus 13 ~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIFG--GTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEEC--CCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 566654 44544 4678999999999999887543
No 109
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=31.67 E-value=29 Score=26.08 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=28.0
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNA 47 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~ 47 (363)
.+++++. .+.| +.|++.+++.|.++|.+|+++ .....
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 3566665 2333 899999999999999999999 65543
No 110
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=31.30 E-value=34 Score=26.77 Aligned_cols=20 Identities=20% Similarity=0.071 Sum_probs=17.6
Q ss_pred HHHHHHHHHhCCCEEEEEeC
Q 039413 24 MFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~ 43 (363)
-..++++|+++||+|+.++-
T Consensus 13 G~~l~~~L~~~g~~V~~~~R 32 (221)
T 3ew7_A 13 GSRILEEAKNRGHEVTAIVR 32 (221)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHhCCCEEEEEEc
Confidence 46899999999999998875
No 111
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=31.04 E-value=93 Score=21.09 Aligned_cols=33 Identities=18% Similarity=0.111 Sum_probs=21.7
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~----~iP~v~~~~~~ 148 (363)
.++|+||.|.-++ .+..+++++ ++|.|.++...
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 4799999997664 344444433 46777776654
No 112
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=30.99 E-value=35 Score=27.28 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=22.8
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+++++.- +.|. --.+++++|+++||+|++++-
T Consensus 22 ~~ilVtG--atG~--iG~~l~~~L~~~G~~V~~~~R 53 (236)
T 3e8x_A 22 MRVLVVG--ANGK--VARYLLSELKNKGHEPVAMVR 53 (236)
T ss_dssp CEEEEET--TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEEC--CCCh--HHHHHHHHHHhCCCeEEEEEC
Confidence 3555543 3333 356899999999999998875
No 113
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=30.97 E-value=91 Score=21.38 Aligned_cols=33 Identities=18% Similarity=0.471 Sum_probs=21.9
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~~ 148 (363)
.++|+||.|..++ .+..+.+++ ++|+|.++...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 4799999997664 344444432 57888777654
No 114
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=30.61 E-value=61 Score=26.46 Aligned_cols=40 Identities=13% Similarity=-0.021 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCCCcEEEecCCCc-----c--HHHHHHHcCCCcEEEe
Q 039413 106 PFENLFERQTLKPCCIISDMCFP-----W--TVDTAAKFNVPRIIFH 145 (363)
Q Consensus 106 ~~~~ll~~~~~~~d~vI~D~~~~-----~--~~~vA~~~~iP~v~~~ 145 (363)
.+.++++++..++|+|++|-... + +.-++-.+|+|.|++.
T Consensus 98 ~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 98 LIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 34444555556799999996553 1 1234445668888774
No 115
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=30.39 E-value=49 Score=27.68 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=24.3
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
|.....+.+|+|.- +.|. --.+|+++|+++||+|+.++-
T Consensus 1 M~~~~~~~~vlVtG--atG~--iG~~l~~~L~~~g~~V~~~~r 39 (321)
T 3vps_A 1 MQRNTLKHRILITG--GAGF--IGGHLARALVASGEEVTVLDD 39 (321)
T ss_dssp ------CCEEEEET--TTSH--HHHHHHHHHHHTTCCEEEECC
T ss_pred CCcccCCCeEEEEC--CCCh--HHHHHHHHHHHCCCEEEEEec
Confidence 44333344666654 4454 356899999999999998864
No 116
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=30.37 E-value=26 Score=32.17 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=26.7
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.+|+||||+-...- -+.++++|.++|++||++...
T Consensus 40 ~~KprVVIIGgG~A-----Gl~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 40 SDKPNVLILGSGWG-----AISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp CSSCEEEEECSSHH-----HHHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCEEEECCcHH-----HHHHHHHhhhCCCcEEEECCC
Confidence 45789999874322 257789999999999999764
No 117
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=30.37 E-value=79 Score=22.13 Aligned_cols=34 Identities=29% Similarity=0.355 Sum_probs=22.5
Q ss_pred CCCcEEEecCCCc---cHHHHHHH----cCCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP---WTVDTAAK----FNVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~---~~~~vA~~----~~iP~v~~~~~~~ 149 (363)
.++|+||.|.... .+..+.+. .++|+|+++....
T Consensus 53 ~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 53 LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 3699999997653 34444443 4688888876543
No 118
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=30.17 E-value=42 Score=27.07 Aligned_cols=23 Identities=43% Similarity=0.470 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCC
Q 039413 22 IPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 22 ~p~l~La~~La~rGh~VT~~t~~ 44 (363)
-.-..+|++|+++|++|+++...
T Consensus 35 ~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 35 KMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEECC
Confidence 45678999999999999998653
No 119
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=30.01 E-value=1.2e+02 Score=20.92 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=20.4
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-------cCCCcEEEecc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-------~~iP~v~~~~~ 147 (363)
.+||+||.|..+. .+..+.++ -++|+|+++..
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 4799999997664 33443332 15777777654
No 120
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=29.79 E-value=99 Score=28.29 Aligned_cols=98 Identities=15% Similarity=0.108 Sum_probs=51.5
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHhhhhhccCCceeEEEecCCCccCCCCCCCCC-CC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAARFKTVHARAIDSGLQIRLIEIQFPWQQAGLPEGCEN-CD 86 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~ 86 (363)
++-+++.. ++-.-+..+++.|.+.|+++. +|....+.++.. +|.+..+.- ..++|+-++- ..
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~---vTgfPEil~GRVK 72 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQ---LTGFPEVLDGRVK 72 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHH---HHSCCCCTTTTSS
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccc---cCCCchhhCCccc
Confidence 34455555 445568899999999998875 554444433331 355544431 1245543321 11
Q ss_pred CCCChhHHHHHHHH---HhchHHHHHHHHhCCCCCcEEEecCC
Q 039413 87 LLPTTDFARFLNSL---HMLQLPFENLFERQTLKPCCIISDMC 126 (363)
Q Consensus 87 ~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~~~~d~vI~D~~ 126 (363)
.+. ......+ +.....++++-+.--.++|+||++.+
T Consensus 73 TLH----P~ihgGiLa~r~~~~h~~~l~~~~i~~iDlVvvNLY 111 (523)
T 3zzm_A 73 TLH----PRVHAGLLADLRKSEHAAALEQLGIEAFELVVVNLY 111 (523)
T ss_dssp SCS----HHHHHHHHCCTTSHHHHHHHHHHTCCCCSEEEEECC
T ss_pred cCC----chhhhhhccCCCCHHHHHHHHHCCCCceeEEEEeCC
Confidence 111 1222222 23445566655442357999999954
No 121
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=29.47 E-value=1.3e+02 Score=20.09 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=20.7
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEecc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~ 147 (363)
.++|+||.|...+ .+..+.+++ ++|.|.++..
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 4799999998764 344444332 4677777654
No 122
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=29.41 E-value=67 Score=22.19 Aligned_cols=27 Identities=7% Similarity=0.076 Sum_probs=21.3
Q ss_pred CCCHHHHHHHHHHHHhC-CC-EEEEEeCC
Q 039413 18 PGHMIPMFDTARLLAQR-GA-IVTIVTTP 44 (363)
Q Consensus 18 ~gH~~p~l~La~~La~r-Gh-~VT~~t~~ 44 (363)
.......+.++..+++. || +|+++-..
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 34556678999999998 99 99988653
No 123
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=29.10 E-value=92 Score=26.34 Aligned_cols=32 Identities=22% Similarity=0.156 Sum_probs=23.0
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.+++.-.+.| --..++++|+++|++|.++.-
T Consensus 9 k~vlVTGas~g---IG~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGGANG---VGIGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETTTST---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEcCCchH---HHHHHHHHHHHCCCEEEEEEC
Confidence 45666644433 357899999999999887653
No 124
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=28.78 E-value=71 Score=23.29 Aligned_cols=35 Identities=11% Similarity=0.022 Sum_probs=24.2
Q ss_pred eEEEEcCCCCCCHHHH--HHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPM--FDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~--l~La~~La~rGh~VT~~t~ 43 (363)
-++++..+-+|+.... +.++..++..||+|+++-.
T Consensus 8 ~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~ 44 (136)
T 2hy5_B 8 FMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFL 44 (136)
T ss_dssp EEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEEC
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 3445555556765544 6668888899999998754
No 125
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=28.70 E-value=40 Score=26.48 Aligned_cols=20 Identities=20% Similarity=0.027 Sum_probs=17.5
Q ss_pred HHHHHHHHHhCCCEEEEEeC
Q 039413 24 MFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~ 43 (363)
-..++++|+++||+|+.++-
T Consensus 13 G~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 13 GSAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEEe
Confidence 47899999999999998864
No 126
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=28.67 E-value=92 Score=22.24 Aligned_cols=34 Identities=9% Similarity=-0.013 Sum_probs=24.0
Q ss_pred EEEEcCCCCC--CHHHHHHHHHHHHhCCCEE-EEEeC
Q 039413 10 FLLLPFLAPG--HMIPMFDTARLLAQRGAIV-TIVTT 43 (363)
Q Consensus 10 lv~~p~p~~g--H~~p~l~La~~La~rGh~V-T~~t~ 43 (363)
++++..+-.| .....+.++..+++.||+| +++-.
T Consensus 4 ~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~ 40 (130)
T 2hy5_A 4 ALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFY 40 (130)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEe
Confidence 3444444443 4557788999999999999 87754
No 127
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=28.63 E-value=1.2e+02 Score=20.31 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=21.7
Q ss_pred CCcEEEecCCCc--cHHHHHHHc-----CCCcEEEecccH
Q 039413 117 KPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEFSC 149 (363)
Q Consensus 117 ~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~~~ 149 (363)
++|+||.|..++ .+..+.+++ ++|.|.++....
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 699999998765 344444432 478777766543
No 128
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=28.18 E-value=97 Score=24.72 Aligned_cols=32 Identities=9% Similarity=-0.138 Sum_probs=22.4
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.+++.-.+. ---..++++|+++|++|+++.-
T Consensus 8 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 8 RRVLVYGGRG---ALGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEECCCc---HHHHHHHHHHHhCCCEEEEEeC
Confidence 4445553333 2457899999999999988754
No 129
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=28.05 E-value=30 Score=29.21 Aligned_cols=38 Identities=13% Similarity=0.009 Sum_probs=24.1
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
|.....+++|.++-... .-..+++.|+++||+|+++..
T Consensus 1 M~~~~~~~~I~iIG~G~-----mG~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGS-----MGMGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSH-----HHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCeEEEECCCH-----HHHHHHHHHHHCCCeEEEEEC
Confidence 44334456788885433 335789999999999998853
No 130
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=27.98 E-value=2.2e+02 Score=23.09 Aligned_cols=33 Identities=18% Similarity=0.018 Sum_probs=24.0
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.+++++.-.+. ---..++++|+++|++|.++..
T Consensus 26 ~k~vlITGas~---gIG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 26 TPVVLVTGGSR---GIGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp SCEEEETTTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc---hHHHHHHHHHHHCCCEEEEEcC
Confidence 35666765443 2457999999999999987644
No 131
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=27.91 E-value=56 Score=25.88 Aligned_cols=39 Identities=21% Similarity=0.077 Sum_probs=27.1
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHh-CCCEEEEEeCCCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQ-RGAIVTIVTTPVN 46 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~-rGh~VT~~t~~~~ 46 (363)
+.+|++.-..+.+ ..-...++++|.+ +|++|+++.++.-
T Consensus 19 ~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A 58 (206)
T 1qzu_A 19 KFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERA 58 (206)
T ss_dssp SEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGG
T ss_pred CCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhH
Confidence 3466666555555 4456899999998 8999999988643
No 132
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=27.68 E-value=1.2e+02 Score=20.73 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=20.8
Q ss_pred CCcEEEecCCCc---cHHHHHHHc-----CCCcEEEeccc
Q 039413 117 KPCCIISDMCFP---WTVDTAAKF-----NVPRIIFHEFS 148 (363)
Q Consensus 117 ~~d~vI~D~~~~---~~~~vA~~~-----~iP~v~~~~~~ 148 (363)
++|+||.|.... .+..+.+++ ++|+|+++...
T Consensus 50 ~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHA 89 (132)
T ss_dssp CCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 799999997654 344444332 47887776553
No 133
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=27.61 E-value=96 Score=22.30 Aligned_cols=33 Identities=18% Similarity=0.094 Sum_probs=21.4
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-----cCCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-----FNVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-----~~iP~v~~~~~~ 148 (363)
.+||+||.|..+. .+..+.++ -++|+|+++...
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 4799999998764 34444433 247777776654
No 134
>2cg8_A Dihydroneopterin aldolase 6-hydroxymethyl-7,8- dihydropterin synthase; lyase/transferase, folate biosynthesis, pyrophosphokinase, lyase; 2.9A {Streptococcus pneumoniae}
Probab=27.32 E-value=34 Score=28.52 Aligned_cols=26 Identities=23% Similarity=0.172 Sum_probs=22.5
Q ss_pred EEEEecCCCcCCChhHHHHHHHHHhh
Q 039413 282 VVYVCLGSICNLPSSQLIELGLGLEA 307 (363)
Q Consensus 282 VIyvsfGS~~~l~~~~~~~~~~~l~~ 307 (363)
.+|+|+||+..-+.+.++.-...|++
T Consensus 121 ~~~i~lGsN~gd~~~~l~~A~~~L~~ 146 (270)
T 2cg8_A 121 RAFIALGSNMGDKQANLKQAIDKLRA 146 (270)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCCCHHHHHHHHHHHHhc
Confidence 59999999997777888888888887
No 135
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=27.31 E-value=82 Score=25.54 Aligned_cols=32 Identities=22% Similarity=0.108 Sum_probs=23.5
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.+++.-.+.| --..++++|+++|++|.++.-
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 55666654443 457899999999999987753
No 136
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=27.20 E-value=1e+02 Score=21.55 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=21.6
Q ss_pred CCCcEEEecCCCc-------cHHHHHHH----c-CCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP-------WTVDTAAK----F-NVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~-------~~~~vA~~----~-~iP~v~~~~~~~ 149 (363)
.++|+||.|.-.. .+..+.++ . ++|+|+++....
T Consensus 46 ~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 4699999997654 33443332 2 578888766543
No 137
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=26.66 E-value=95 Score=22.31 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=21.9
Q ss_pred CCCcEEEecCCCc--cHHHHHHH----c-CCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK----F-NVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~----~-~iP~v~~~~~~~ 149 (363)
.++|+||.|..+. .+..+.+. . ++|+|+++....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999997664 34444433 2 578887766543
No 138
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=26.51 E-value=47 Score=25.51 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=22.8
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
++++.- +.|- --..++++|+++||+|+.++-
T Consensus 5 ~ilVtG--atG~--iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 5 KIAIFG--ATGQ--TGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp EEEEES--TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEEc--CCcH--HHHHHHHHHHHCCCeEEEEEe
Confidence 566553 3342 457899999999999998874
No 139
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=26.42 E-value=46 Score=25.75 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=27.0
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVN 46 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~ 46 (363)
||++.-..+. ...=...+.++|.++|++|+++.++.-
T Consensus 4 ~IllgvTGs~-aa~k~~~l~~~L~~~g~~V~vv~T~~A 40 (181)
T 1g63_A 4 KLLICATASI-NVININHYIVELKQHFDEVNILFSPSS 40 (181)
T ss_dssp CEEEEECSCG-GGGGHHHHHHHHTTTSSCEEEEECGGG
T ss_pred EEEEEEECHH-HHHHHHHHHHHHHHCCCEEEEEEchhH
Confidence 5555444444 444678999999999999999988643
No 140
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=26.37 E-value=1.3e+02 Score=20.87 Aligned_cols=33 Identities=27% Similarity=0.480 Sum_probs=21.5
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~~ 148 (363)
.++|+||.|..++ -+..+.+++ ++|+|+++...
T Consensus 48 ~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 48 YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 3689999998764 344444432 47777776654
No 141
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=26.30 E-value=37 Score=28.73 Aligned_cols=34 Identities=18% Similarity=0.072 Sum_probs=24.8
Q ss_pred CCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 5 ASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 5 ~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
....+|.++-... .-..+++.|+++||+|+++..
T Consensus 7 ~~~~~IgiIG~G~-----mG~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 7 SFEFDVSVIGLGA-----MGTIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCSCSEEEECCSH-----HHHHHHHHHHHTTCCEEEECS
T ss_pred cCCCeEEEECCCH-----HHHHHHHHHHHCCCEEEEEeC
Confidence 3456788885433 335789999999999998753
No 142
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=26.16 E-value=1.4e+02 Score=24.19 Aligned_cols=32 Identities=22% Similarity=0.104 Sum_probs=23.3
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.+++.-.+.| --..++++|+++|++|.++..
T Consensus 27 k~vlVTGas~g---IG~~la~~l~~~G~~v~i~~~ 58 (267)
T 4iiu_A 27 RSVLVTGASKG---IGRAIARQLAADGFNIGVHYH 58 (267)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 45666644432 357899999999999987664
No 143
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=25.70 E-value=85 Score=25.51 Aligned_cols=32 Identities=19% Similarity=0.050 Sum_probs=23.5
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.+++.-.+.| --.+++++|+++|++|.++..
T Consensus 9 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 9 RTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 56666644443 457899999999999987744
No 144
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=25.61 E-value=1e+02 Score=21.62 Aligned_cols=33 Identities=12% Similarity=0.048 Sum_probs=22.1
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~----~iP~v~~~~~~ 148 (363)
.++|+||.|..++ .+..+.+++ .+|+|+++...
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 4799999997664 344444433 57888776654
No 145
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=25.53 E-value=1.3e+02 Score=20.37 Aligned_cols=33 Identities=21% Similarity=0.423 Sum_probs=21.5
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~~ 148 (363)
.++|+||.|.-++ .+..+++++ ++|+|.++...
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 46 ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 3699999997664 344444432 47777776654
No 146
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=25.50 E-value=45 Score=28.29 Aligned_cols=41 Identities=15% Similarity=0.069 Sum_probs=35.5
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhC--CCEEEEEeCCCChhh
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQR--GAIVTIVTTPVNAAR 49 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~r--Gh~VT~~t~~~~~~~ 49 (363)
+|+++-..+-|.+.-..++.++|.++ +.+||+++.+...+.
T Consensus 2 ~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l 44 (326)
T 2gt1_A 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQI 44 (326)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHH
T ss_pred eEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHH
Confidence 78889888999999999999999987 899999998655443
No 147
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=25.47 E-value=1.1e+02 Score=21.76 Aligned_cols=33 Identities=12% Similarity=0.137 Sum_probs=21.6
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-----cCCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-----FNVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-----~~iP~v~~~~~~ 148 (363)
.++|+||.|.-+. .+..+++. -++|+|+++...
T Consensus 65 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 65 ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 5799999997664 34444442 247777776654
No 148
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=25.28 E-value=98 Score=21.76 Aligned_cols=32 Identities=13% Similarity=0.265 Sum_probs=20.7
Q ss_pred CCCcEEEecCCCcc--HHHHHHH----c-CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFPW--TVDTAAK----F-NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~~--~~~vA~~----~-~iP~v~~~~~~ 148 (363)
.++|+||.|. ... +..+.+. . ++|+|+++...
T Consensus 47 ~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 47 EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 4799999998 642 2333332 2 47888877654
No 149
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=25.10 E-value=1.6e+02 Score=19.73 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=22.0
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-----cCCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-----FNVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-----~~iP~v~~~~~~~ 149 (363)
.++|+||.|..++ .+..+.++ -++|+|.++....
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 83 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARES 83 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCC
Confidence 4799999997764 34444432 2478887776543
No 150
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=25.09 E-value=55 Score=26.32 Aligned_cols=44 Identities=7% Similarity=0.094 Sum_probs=0.0
Q ss_pred HHHHHHHHh-CCCCCcEEEecCCCccH---------HHHHHHcCCCcEEEeccc
Q 039413 105 LPFENLFER-QTLKPCCIISDMCFPWT---------VDTAAKFNVPRIIFHEFS 148 (363)
Q Consensus 105 ~~~~~ll~~-~~~~~d~vI~D~~~~~~---------~~vA~~~~iP~v~~~~~~ 148 (363)
+.+.+.+++ ...++|+||.|.-..+. .++|+.++.|++.+....
T Consensus 97 ~~i~~~~~~~l~~~~D~vlIEgaggl~~p~~~~~~~adla~~l~~pviLV~~~~ 150 (228)
T 3of5_A 97 ENLKQFIEDKYNQDLDILFIEGAGGLLTPYSDHTTQLDLIKALQIPVLLVSAIK 150 (228)
T ss_dssp HHHHHHHHGGGGSSCSEEEEEEEEETTCBSSSSCBHHHHHHHHTCCEEEEEECS
T ss_pred HHHHHHHHHHHHccCCEEEEECCCccccccccchhHHHHHHHcCCCEEEEEcCC
No 151
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=24.71 E-value=1.5e+02 Score=20.67 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=20.8
Q ss_pred CCCcEEEecCCCc---cHHHHHH----HcCCCcEEEecc
Q 039413 116 LKPCCIISDMCFP---WTVDTAA----KFNVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~D~~~~---~~~~vA~----~~~iP~v~~~~~ 147 (363)
.+||+||.|..++ .+..+++ .-++|+|+++..
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~ 87 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAH 87 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESS
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECC
Confidence 4799999997663 3444443 236787777654
No 152
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=24.65 E-value=1.2e+02 Score=28.46 Aligned_cols=43 Identities=12% Similarity=0.002 Sum_probs=36.9
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPVNAA 48 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~~~~ 48 (363)
.+.+|++.+.++-.|-+...-++..|..+|++|..+-..-..+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e 139 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAE 139 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 3668999999999999999999999999999999886654433
No 153
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=24.45 E-value=1.5e+02 Score=20.84 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=21.6
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-------cCCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-------~~iP~v~~~~~~ 148 (363)
.++|+||.|.... .+..+.+. -++|+|+++...
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 50 AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 5799999998765 23444432 247878777654
No 154
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=24.44 E-value=57 Score=23.56 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=25.3
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+.|++++-+ |. .-..+++.|.++|++|+++...
T Consensus 7 ~~~viIiG~---G~--~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGY---GR--VGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECC---SH--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECc---CH--HHHHHHHHHHHCCCCEEEEECC
Confidence 457888764 33 3468899999999999999764
No 155
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=24.24 E-value=1.5e+02 Score=20.76 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=21.4
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~~ 148 (363)
.++|+||.|.... .+..+.+.+ ++|+|+++...
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5799999997764 344444322 47777776654
No 156
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=23.97 E-value=1.1e+02 Score=25.05 Aligned_cols=33 Identities=24% Similarity=0.108 Sum_probs=24.2
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.+++++.-.+.| --.+++++|+++|++|.++..
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356677654432 467899999999999987654
No 157
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=23.90 E-value=1.4e+02 Score=20.60 Aligned_cols=33 Identities=9% Similarity=0.076 Sum_probs=21.3
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~~ 148 (363)
.++|+||.|..++ .+..+.+++ ++|+|.++...
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 46 EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 4799999997664 344444332 47777776654
No 158
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=23.82 E-value=20 Score=32.55 Aligned_cols=34 Identities=18% Similarity=0.024 Sum_probs=25.4
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+.+|++++-..- .-..||+.|.++||+||++-..
T Consensus 2 ~~M~iiI~G~G~-----vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQ-----VGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSH-----HHHHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCH-----HHHHHHHHHHHCCCCEEEEECC
Confidence 456877775443 3467999999999999999643
No 159
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=23.82 E-value=1.1e+02 Score=21.53 Aligned_cols=31 Identities=13% Similarity=0.321 Sum_probs=19.6
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEec
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHE 146 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~ 146 (363)
.++|+||.|.-++ .+..+++++ ++|+|.++.
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 4699999998664 344444432 356666654
No 160
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=23.81 E-value=1.2e+02 Score=20.64 Aligned_cols=32 Identities=9% Similarity=0.068 Sum_probs=19.9
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-------cCCCcEEEecc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-------~~iP~v~~~~~ 147 (363)
.+||+||.|..+. .+..++++ -++|+|+++..
T Consensus 46 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 4799999997664 34444432 23666666554
No 161
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=23.66 E-value=94 Score=26.33 Aligned_cols=32 Identities=19% Similarity=0.214 Sum_probs=25.2
Q ss_pred CceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 7 QSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 7 ~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.++|.++-....| ..+++.|+++||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 4588888665555 6788999999999998854
No 162
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=23.65 E-value=1.2e+02 Score=23.43 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=26.4
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.++++-....|+-.-+..+++.|+++|+.|..+..
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 34444445667778899999999999998877654
No 163
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=23.62 E-value=1.2e+02 Score=25.16 Aligned_cols=32 Identities=22% Similarity=0.477 Sum_probs=22.1
Q ss_pred CCCcEEEecCCCc-c--HH----HHHHHcCCCcEEEecc
Q 039413 116 LKPCCIISDMCFP-W--TV----DTAAKFNVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~D~~~~-~--~~----~vA~~~~iP~v~~~~~ 147 (363)
.+||+||+|..++ . +. .+-+..++|+|.++..
T Consensus 204 ~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 204 RTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp CCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 4799999998776 2 22 2322337999888775
No 164
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=23.49 E-value=1.7e+02 Score=20.29 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=21.7
Q ss_pred CCCcEEEecCCCc--cHHHHHHH------cCCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK------FNVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~------~~iP~v~~~~~~~ 149 (363)
.+||+||.|..++ .+..++++ ..+|+|.++....
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~ 92 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFAD 92 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCC
Confidence 4699999998775 34444332 2467777766543
No 165
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=23.47 E-value=1.2e+02 Score=23.11 Aligned_cols=52 Identities=17% Similarity=0.118 Sum_probs=34.0
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCC--CEEEEEeCCCChhhhHHH
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRG--AIVTIVTTPVNAARFKTV 53 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rG--h~VT~~t~~~~~~~~~~~ 53 (363)
|+....+++|+++. .+.|.+-.+...++.|-+-| ++|.+++....-+++..+
T Consensus 1 ~~~~~~~~~V~Iim-gS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~ 54 (174)
T 3lp6_A 1 MTPAGERPRVGVIM-GSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSY 54 (174)
T ss_dssp -----CCCSEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHH
T ss_pred CCCCCCCCeEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHH
Confidence 44445556666654 78999999999999998887 567777766554444433
No 166
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=23.43 E-value=1.7e+02 Score=20.78 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=21.4
Q ss_pred CCCcEEEecCCCc--cHHHHHHH----c-CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK----F-NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~----~-~iP~v~~~~~~ 148 (363)
.++|+||.|.... .+..+.+. . ++|+|+++...
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4699999997664 33443332 2 57888877654
No 167
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=23.40 E-value=1.2e+02 Score=20.73 Aligned_cols=33 Identities=18% Similarity=0.140 Sum_probs=20.8
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-------CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-------~iP~v~~~~~~ 148 (363)
.++|+||.|..++ .+..+.+++ ++|.|.++...
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 91 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQG 91 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCC
Confidence 4799999998764 455555543 34556655543
No 168
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=23.39 E-value=1.1e+02 Score=21.48 Aligned_cols=33 Identities=9% Similarity=0.089 Sum_probs=20.9
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-------cCCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-------~~iP~v~~~~~~ 148 (363)
.+||+||.|..+. .+..+.++ -++|+|+++...
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 4799999998764 34444432 246777666543
No 169
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=23.35 E-value=3e+02 Score=22.26 Aligned_cols=39 Identities=8% Similarity=-0.228 Sum_probs=24.6
Q ss_pred chHHHHHHHHhCCCCCcEEEecCCCccH-HHHHHHcCCCcEEE
Q 039413 103 LQLPFENLFERQTLKPCCIISDMCFPWT-VDTAAKFNVPRIIF 144 (363)
Q Consensus 103 ~~~~~~~ll~~~~~~~d~vI~D~~~~~~-~~vA~~~~iP~v~~ 144 (363)
+.+.++++.+. .+|+||.-.+...+ ..+.+.+++|++.+
T Consensus 58 l~~~~~~l~~~---g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 58 VLEQIRAGREQ---GVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HHHHHHHHHHH---TCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred HHHHHHHHHHC---CCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 33444444443 68999988765433 45666789998876
No 170
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=23.28 E-value=1e+02 Score=20.90 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=19.4
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-------CCCcEEEecc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-------~iP~v~~~~~ 147 (363)
.++|+||.|..++ .+..+++++ ++|+|.++..
T Consensus 44 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 44 NKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 3699999998664 344444432 4677776554
No 171
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=23.19 E-value=1.7e+02 Score=23.69 Aligned_cols=32 Identities=25% Similarity=0.036 Sum_probs=22.2
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.+++.-.+ | ---..++++|+++|++|+++.-
T Consensus 8 k~vlVTGas-~--gIG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVTGAA-Q--GIGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEETTT-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-C--cHHHHHHHHHHHCCCEEEEEEC
Confidence 345555333 2 3457899999999999998753
No 172
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=23.13 E-value=1.2e+02 Score=24.72 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=24.2
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
.+++++.-.+.| --..++++|+++|++|.++.-
T Consensus 8 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 8 EAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666655543 467899999999999887753
No 173
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=23.03 E-value=50 Score=25.92 Aligned_cols=20 Identities=5% Similarity=-0.160 Sum_probs=17.5
Q ss_pred HHHHHHHHHhCCCEEEEEeC
Q 039413 24 MFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~t~ 43 (363)
-..++++|+++||+|+.++-
T Consensus 13 G~~l~~~L~~~g~~V~~~~R 32 (219)
T 3dqp_A 13 GKSLLKSLSTTDYQIYAGAR 32 (219)
T ss_dssp HHHHHHHHTTSSCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEEC
Confidence 47899999999999998874
No 174
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=22.84 E-value=1.7e+02 Score=23.59 Aligned_cols=32 Identities=19% Similarity=-0.007 Sum_probs=22.0
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.+++.-.+ | ---..++++|+++|++|+++.-
T Consensus 8 k~vlVTGas-~--gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGA-R--GMGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTT-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-C--HHHHHHHHHHHHCCCEEEEEeC
Confidence 344555333 2 3457899999999999988753
No 175
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=22.70 E-value=90 Score=25.80 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=23.0
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
.+++++.-.+.| --..++++|+++|++|.++.
T Consensus 8 gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 8 GKIAIVTGASSG---IGRAAALLFAREGAKVVVTA 39 (280)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEE
Confidence 356777755543 45789999999999987643
No 176
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=22.66 E-value=23 Score=29.92 Aligned_cols=34 Identities=18% Similarity=-0.051 Sum_probs=24.5
Q ss_pred CCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 6 SQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
...+|+++-... --+..|..|+++|++||++-..
T Consensus 6 ~~~~vvIIG~G~-----aGl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 6 KVYDITIIGGGP-----VGLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEEECCSH-----HHHHHHHHHHHTTCCEEEECSS
T ss_pred ccceEEEECCCH-----HHHHHHHHHHHCCCCEEEEEcC
Confidence 345788776432 2367888999999999999653
No 177
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=22.50 E-value=1.3e+02 Score=21.07 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=21.0
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~~ 148 (363)
.++|+||.|..++ .+..+.+.+ ++|.|+++...
T Consensus 43 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYT 82 (139)
T ss_dssp SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 4699999998764 344444332 46777776554
No 178
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=22.49 E-value=1.4e+02 Score=24.58 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=23.7
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+++++.-.+.| --..++++|+++|++|.++.-
T Consensus 30 k~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 30 KVAIVTGAGAG---IGLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp CEEEETTTTST---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56777655443 457899999999999987753
No 179
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=22.49 E-value=1.7e+02 Score=19.90 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=21.5
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-------CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-------~iP~v~~~~~~ 148 (363)
.++|+||.|..++ .+..+.+++ .+|.+.++...
T Consensus 48 ~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 48 GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc
Confidence 4799999998764 345555432 36777776654
No 180
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=22.45 E-value=55 Score=23.26 Aligned_cols=38 Identities=11% Similarity=-0.051 Sum_probs=26.8
Q ss_pred CcEEEEecCCCcCCChhHHHHHHHHHhhCCCCeEEEEe
Q 039413 280 TSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIR 317 (363)
Q Consensus 280 ~sVIyvsfGS~~~l~~~~~~~~~~~l~~~~~~flW~~~ 317 (363)
.++|++++||-..-..+.+..++..+++...+|-+.+-
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~l 43 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAYM 43 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEES
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 46999999996533446688888888765456666543
No 181
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=22.26 E-value=83 Score=23.75 Aligned_cols=34 Identities=9% Similarity=0.037 Sum_probs=22.3
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-----cCCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-----FNVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-----~~iP~v~~~~~~~ 149 (363)
.+||+||.|..++ .+..++++ -++|+|+++....
T Consensus 50 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~ 90 (184)
T 3rqi_A 50 EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYAS 90 (184)
T ss_dssp SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCC
T ss_pred CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 5799999998765 33444432 2478877776543
No 182
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=22.25 E-value=1.8e+02 Score=19.53 Aligned_cols=34 Identities=18% Similarity=0.130 Sum_probs=22.1
Q ss_pred CCCcEEEecCCCc--cHHHHHHH----cCCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK----FNVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~----~~iP~v~~~~~~~ 149 (363)
.++|+||.|..++ .+..++++ -++|.+.++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 4799999998764 34444443 3577777766543
No 183
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=22.24 E-value=1e+02 Score=21.72 Aligned_cols=36 Identities=14% Similarity=0.009 Sum_probs=24.7
Q ss_pred ceEEEEcCCCC-CCH-HHHHHHHHHHHhCC--CEEEEEeC
Q 039413 8 SHFLLLPFLAP-GHM-IPMFDTARLLAQRG--AIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~-gH~-~p~l~La~~La~rG--h~VT~~t~ 43 (363)
.+++++-+... -.. +..+.+|....++| |+|+++-.
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~ 47 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILW 47 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEEC
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 56666665543 222 44677888888889 89999865
No 184
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=22.19 E-value=1e+02 Score=24.16 Aligned_cols=50 Identities=12% Similarity=0.148 Sum_probs=0.0
Q ss_pred hHHHHHHHHhCCCCCcEEEecCCCccH---------HHHHHHcCCCcEEEecccHHHHH
Q 039413 104 QLPFENLFERQTLKPCCIISDMCFPWT---------VDTAAKFNVPRIIFHEFSCFCLF 153 (363)
Q Consensus 104 ~~~~~~ll~~~~~~~d~vI~D~~~~~~---------~~vA~~~~iP~v~~~~~~~~~~~ 153 (363)
...+++.++.....+|+||.|.--... ..++..++.|++.+...+.....
T Consensus 95 ~~~l~~~l~~l~~~yD~viID~p~~l~~p~~~~~~~~~l~~~~~~~vi~v~~~~~~~~~ 153 (224)
T 1byi_A 95 SLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCIN 153 (224)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSSSTTCEEETTEEHHHHHHHHTCCEEEEEECSTTHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEcCCccccCCCcchhHHHHHHHhCCCEEEEecCCCCcHH
No 185
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=22.08 E-value=1.5e+02 Score=23.50 Aligned_cols=32 Identities=25% Similarity=0.040 Sum_probs=22.2
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.+++.-. .| ---..++++|+++|++|+++.-
T Consensus 8 ~~vlVtGa-sg--giG~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 8 KVSLVTGS-TR--GIGRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp CEEEETTC-SS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-Cc--hHHHHHHHHHHHCCCEEEEEeC
Confidence 34555533 33 3457889999999999998764
No 186
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=21.93 E-value=49 Score=28.61 Aligned_cols=18 Identities=22% Similarity=0.185 Sum_probs=16.1
Q ss_pred HHHHHHHHHhCCCEEEEE
Q 039413 24 MFDTARLLAQRGAIVTIV 41 (363)
Q Consensus 24 ~l~La~~La~rGh~VT~~ 41 (363)
-+.+|..|+++|++|+++
T Consensus 16 Gl~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 16 GSTAARYAAKYGLKTLMI 33 (397)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCcEEEE
Confidence 467889999999999998
No 187
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=21.93 E-value=1.9e+02 Score=23.09 Aligned_cols=21 Identities=24% Similarity=0.056 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhCCCEEEEEeC
Q 039413 23 PMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~ 43 (363)
--..++++|+++|++|+++.-
T Consensus 19 iG~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 19 IGRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 457899999999999998754
No 188
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=21.85 E-value=2.3e+02 Score=25.05 Aligned_cols=42 Identities=14% Similarity=0.220 Sum_probs=29.1
Q ss_pred chHHHHHHHHhCCCCCcEEEecCCCc-----cHHHHHHHcCCCcEEEecc
Q 039413 103 LQLPFENLFERQTLKPCCIISDMCFP-----WTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 103 ~~~~~~~ll~~~~~~~d~vI~D~~~~-----~~~~vA~~~~iP~v~~~~~ 147 (363)
..+.++.|++. .+|+++.+.+.. ++..++++.++|+++..+.
T Consensus 141 ~~eqi~~L~~~---GvDlll~ETi~~~~Eakaa~~a~~~~~lPv~iS~T~ 187 (406)
T 1lt8_A 141 FLQQLEVFMKK---NVDFLIAEYFEHVEEAVWAVETLIASGKPVAATMAI 187 (406)
T ss_dssp HHHHHHHHHHH---TCSEEEECCCSCHHHHHHHHHHHGGGTSCEEEEECC
T ss_pred HHHHHHHHhhC---CCCEEEEcccCCHHHHHHHHHHHHHhCCcEEEEEEE
Confidence 45566666665 699999998876 3445556678887665543
No 189
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=21.71 E-value=1.8e+02 Score=19.28 Aligned_cols=34 Identities=24% Similarity=0.349 Sum_probs=22.4
Q ss_pred CCCcEEEecCCCc--cHHHHHH----HcCCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP--WTVDTAA----KFNVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~----~~~iP~v~~~~~~~ 149 (363)
.++|+||.|..++ .+..+++ .-++|.|+++....
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 3699999997664 3444443 33688888876543
No 190
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.71 E-value=1.7e+02 Score=20.39 Aligned_cols=33 Identities=27% Similarity=0.230 Sum_probs=21.1
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~~ 148 (363)
.++|+||.|..++ .+..+.+.+ ++|+|+++...
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 47 SKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp HCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 3699999997664 344444432 46777776554
No 191
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=21.65 E-value=1.8e+02 Score=22.89 Aligned_cols=21 Identities=38% Similarity=0.279 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeC
Q 039413 23 PMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~ 43 (363)
--.+++++|+++|++|+++.-
T Consensus 19 iG~~~a~~l~~~G~~V~~~~r 39 (244)
T 1cyd_A 19 IGRDTVKALHASGAKVVAVTR 39 (244)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 356899999999999988754
No 192
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=21.63 E-value=1.2e+02 Score=21.59 Aligned_cols=33 Identities=18% Similarity=0.368 Sum_probs=21.5
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-------CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-------~iP~v~~~~~~ 148 (363)
.++|+||.|..++ .+..+++++ ++|+|+++...
T Consensus 60 ~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 60 PRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 3699999998764 344444332 46778777654
No 193
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=21.58 E-value=1.6e+02 Score=24.64 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=22.9
Q ss_pred eEEEEcCC--CCCCHHHHHHHHHHHHhCCCEEEEEe
Q 039413 9 HFLLLPFL--APGHMIPMFDTARLLAQRGAIVTIVT 42 (363)
Q Consensus 9 ~lv~~p~p--~~gH~~p~l~La~~La~rGh~VT~~t 42 (363)
+++++.-. +.| --..++++|+++|++|.++.
T Consensus 10 k~~lVTGa~~s~G---IG~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 10 KTAFVAGVADSNG---YGWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp CEEEEECCCCTTS---HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCCCCc---HHHHHHHHHHHCCCEEEEEe
Confidence 55666654 343 45789999999999998864
No 194
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.35 E-value=98 Score=24.15 Aligned_cols=37 Identities=11% Similarity=-0.054 Sum_probs=27.4
Q ss_pred HHHHHHHHhCCCCCcEEEecCCCccHHHHHHHcCCCcEEEecc
Q 039413 105 LPFENLFERQTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHEF 147 (363)
Q Consensus 105 ~~~~~ll~~~~~~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~~ 147 (363)
..++++.+ ..+++||-|.. +..+|+++|+|.+.+.+.
T Consensus 133 ~~i~~l~~---~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 133 TLISKVKT---ENIKIVVSGKT---VTDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHHHHHH---TTCCEEEECHH---HHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHH---CCCeEEECCHH---HHHHHHHcCCcEEEEecC
Confidence 44444444 47999999853 478999999999988764
No 195
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=21.34 E-value=67 Score=25.47 Aligned_cols=21 Identities=33% Similarity=0.289 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhCCCEEEEEeC
Q 039413 23 PMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~ 43 (363)
--..++++|+++|++|+++.-
T Consensus 17 iG~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 17 IGEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEEC
Confidence 357899999999999988764
No 196
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=21.28 E-value=66 Score=25.74 Aligned_cols=21 Identities=24% Similarity=0.124 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeC
Q 039413 23 PMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~ 43 (363)
--.+++++|+++|++|+++.-
T Consensus 13 iG~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 13 IGAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHhCCCEEEEEeC
Confidence 356789999999999998754
No 197
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=21.27 E-value=58 Score=24.75 Aligned_cols=43 Identities=23% Similarity=0.261 Sum_probs=28.8
Q ss_pred cccCCCCCCcEEEEecCCCcC---CCh----hHHHHHHHHHhhCCCCeEEE
Q 039413 272 TWLDSQQPTSVVYVCLGSICN---LPS----SQLIELGLGLEASNKPFVWV 315 (363)
Q Consensus 272 ~wLd~~~~~sVIyvsfGS~~~---l~~----~~~~~~~~~l~~~~~~flW~ 315 (363)
+.+.+..+. +|.|.+|++-. .+. +.++++++.+++.+.+++|.
T Consensus 56 ~~~~~~~pd-~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~ 105 (190)
T 1ivn_A 56 ALLKQHQPR-WVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLM 105 (190)
T ss_dssp HHHHHHCCS-EEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhcCCC-EEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 344432344 89999999763 344 34677777787777788886
No 198
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=21.24 E-value=1.8e+02 Score=21.23 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=20.4
Q ss_pred CCCcEEEecCCCc--cHHHHHH----HcCCCcEEEecc
Q 039413 116 LKPCCIISDMCFP--WTVDTAA----KFNVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~----~~~iP~v~~~~~ 147 (363)
.++|+||.|..+. .+..+.+ ...+|+|.++..
T Consensus 70 ~~~dlvilD~~l~~~~g~~l~~~lr~~~~~~ii~~s~~ 107 (164)
T 3t8y_A 70 LKPDVITMDIEMPNLNGIEALKLIMKKAPTRVIMVSSL 107 (164)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHSCCEEEEEESS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEecC
Confidence 3699999997664 3344333 345677777654
No 199
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=21.23 E-value=59 Score=25.58 Aligned_cols=32 Identities=25% Similarity=0.184 Sum_probs=23.2
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
++|++.- +.|. --..++++|+++||+|+.++-
T Consensus 5 ~~ilItG--atG~--iG~~l~~~L~~~g~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIG--ASGF--VGSALLNEALNRGFEVTAVVR 36 (227)
T ss_dssp CEEEEET--CCHH--HHHHHHHHHHTTTCEEEEECS
T ss_pred CEEEEEc--CCch--HHHHHHHHHHHCCCEEEEEEc
Confidence 3666654 3443 347889999999999998864
No 200
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=21.20 E-value=1.7e+02 Score=22.63 Aligned_cols=34 Identities=18% Similarity=0.195 Sum_probs=22.7
Q ss_pred CCCcEEEecCCCc--cHHHHHHH-----cCCCcEEEecccH
Q 039413 116 LKPCCIISDMCFP--WTVDTAAK-----FNVPRIIFHEFSC 149 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~-----~~iP~v~~~~~~~ 149 (363)
.+||+||.|..++ .+..+.+. -++|+|+++....
T Consensus 45 ~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~ 85 (225)
T 1kgs_A 45 EPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSD 85 (225)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 4799999998764 34444432 2578888876653
No 201
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=21.19 E-value=1.9e+02 Score=19.72 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=19.4
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc------CCCcEEEecc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF------NVPRIIFHEF 147 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~------~iP~v~~~~~ 147 (363)
.++|+||.|.... .+..+.+++ ..|.|++.+.
T Consensus 49 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 4799999998764 344444432 3455555544
No 202
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=21.18 E-value=2.1e+02 Score=22.52 Aligned_cols=21 Identities=29% Similarity=0.167 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhCCCEEEEEeC
Q 039413 23 PMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 23 p~l~La~~La~rGh~VT~~t~ 43 (363)
--..++++|+++|++|+++.-
T Consensus 19 iG~~~a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 19 IGRGTVQALHATGARVVAVSR 39 (244)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 367889999999999988753
No 203
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=21.18 E-value=2e+02 Score=19.55 Aligned_cols=37 Identities=11% Similarity=0.110 Sum_probs=23.9
Q ss_pred CCCCCCCceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEE
Q 039413 1 MASEASQSHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIV 41 (363)
Q Consensus 1 m~~~~~~~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~ 41 (363)
|+....+.+|+++- .+-.-...+.+.|.+.|++|+.+
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~ 37 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSSLGATTVLA 37 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhCCceEEEe
Confidence 55555566777774 45556667777788888887754
No 204
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=20.99 E-value=76 Score=27.22 Aligned_cols=24 Identities=13% Similarity=0.140 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 21 MIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 21 ~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
+-+|+.|.+.|.++|++|.++|..
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas 168 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAA 168 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568999999999999999999873
No 205
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=20.96 E-value=1.3e+02 Score=21.50 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=20.9
Q ss_pred CCCcEEEecCCCc--cHHHHHHHc-----CCCcEEEeccc
Q 039413 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHEFS 148 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~~~-----~iP~v~~~~~~ 148 (363)
.+||+||.|..+. .+..+.+.+ ++|+|+++...
T Consensus 60 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 99 (152)
T 3eul_A 60 HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHD 99 (152)
T ss_dssp HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccC
Confidence 4799999997664 344444322 46777776654
No 206
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.89 E-value=1.8e+02 Score=22.57 Aligned_cols=36 Identities=14% Similarity=-0.050 Sum_probs=24.4
Q ss_pred CCceEEEEcCCCCCC----HHHHHHHHHHHHhCCCEEEEEeCC
Q 039413 6 SQSHFLLLPFLAPGH----MIPMFDTARLLAQRGAIVTIVTTP 44 (363)
Q Consensus 6 ~~~~lv~~p~p~~gH----~~p~l~La~~La~rGh~VT~~t~~ 44 (363)
.++.|.||.... +. ..-...|++.|+++|+.| ++.-
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~l--v~GG 51 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTL--VWGG 51 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEE--EECC
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEE--EECC
Confidence 356899988655 43 455677888889999865 4543
No 207
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=20.65 E-value=2e+02 Score=21.81 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=31.3
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeCCC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTTPV 45 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~~~ 45 (363)
-+.+...++.|=..-+..|+++|.++|.+|.++....
T Consensus 6 ~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 4666777788999999999999999999999888654
No 208
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=20.62 E-value=80 Score=25.11 Aligned_cols=30 Identities=13% Similarity=0.134 Sum_probs=23.4
Q ss_pred CCcEEEecCCCccHHHHHHHcCCCcEEEec
Q 039413 117 KPCCIISDMCFPWTVDTAAKFNVPRIIFHE 146 (363)
Q Consensus 117 ~~d~vI~D~~~~~~~~vA~~~~iP~v~~~~ 146 (363)
.+.+||+|---..+...|+++|+|+..+.+
T Consensus 31 eI~~Visn~~~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 31 EVALLITDKPGAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp EEEEEEESCSSSHHHHHHHTTTCCEEECCG
T ss_pred EEEEEEECCCCcHHHHHHHHcCCCEEEeCh
Confidence 478899986555567899999999877654
No 209
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=20.51 E-value=61 Score=28.22 Aligned_cols=29 Identities=28% Similarity=0.076 Sum_probs=22.0
Q ss_pred ceEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEE
Q 039413 8 SHFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIV 41 (363)
Q Consensus 8 ~~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~ 41 (363)
+||+|+--. ..-+.+|..|+++|++||++
T Consensus 2 m~V~IVGaG-----paGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAG-----IGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCS-----HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcC-----HHHHHHHHHHHhCCCCEEEE
Confidence 467766533 23477889999999999998
No 210
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=20.47 E-value=1.2e+02 Score=24.90 Aligned_cols=32 Identities=25% Similarity=0.033 Sum_probs=24.0
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHhCCCEEEEEeC
Q 039413 9 HFLLLPFLAPGHMIPMFDTARLLAQRGAIVTIVTT 43 (363)
Q Consensus 9 ~lv~~p~p~~gH~~p~l~La~~La~rGh~VT~~t~ 43 (363)
+.+++.-.+.| --..++++|+++|++|.++.-
T Consensus 31 k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 56667655544 467899999999999887653
No 211
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=20.25 E-value=2.2e+02 Score=19.71 Aligned_cols=20 Identities=20% Similarity=0.217 Sum_probs=13.8
Q ss_pred CCCcEEEecCCCc--cHHHHHH
Q 039413 116 LKPCCIISDMCFP--WTVDTAA 135 (363)
Q Consensus 116 ~~~d~vI~D~~~~--~~~~vA~ 135 (363)
.++|+||.|..++ .+..+++
T Consensus 53 ~~~dlvllD~~lp~~~g~~~~~ 74 (140)
T 3c97_A 53 RQFDVIIMDIQMPVMDGLEAVS 74 (140)
T ss_dssp SCCSEEEECTTCCSSCHHHHHH
T ss_pred CCCCEEEEeCCCCCCcHHHHHH
Confidence 4799999998764 3444444
No 212
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=20.17 E-value=76 Score=24.86 Aligned_cols=21 Identities=10% Similarity=-0.059 Sum_probs=17.7
Q ss_pred HHHHHHHHHH-hCCCEEEEEeC
Q 039413 23 PMFDTARLLA-QRGAIVTIVTT 43 (363)
Q Consensus 23 p~l~La~~La-~rGh~VT~~t~ 43 (363)
--..++++|+ ++||+|++++-
T Consensus 17 iG~~~~~~l~~~~g~~V~~~~r 38 (221)
T 3r6d_A 17 IAQXLTATLLTYTDMHITLYGR 38 (221)
T ss_dssp HHHHHHHHHHHHCCCEEEEEES
T ss_pred HHHHHHHHHHhcCCceEEEEec
Confidence 3578999999 89999998764
No 213
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=20.12 E-value=90 Score=23.25 Aligned_cols=37 Identities=19% Similarity=0.040 Sum_probs=27.6
Q ss_pred CcEEEEecCCCcCCChhHHHHHHHHHhhC-C-CCeEEEE
Q 039413 280 TSVVYVCLGSICNLPSSQLIELGLGLEAS-N-KPFVWVI 316 (363)
Q Consensus 280 ~sVIyvsfGS~~~l~~~~~~~~~~~l~~~-~-~~flW~~ 316 (363)
.+||+++.||-..-..+.+..++..|++. + .+|-+.+
T Consensus 25 ~avlLv~HGS~~p~~~~~~~~la~~l~~~~~~~~V~~af 63 (156)
T 1tjn_A 25 RGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAF 63 (156)
T ss_dssp EEEEEEECCTTSTTHHHHHHHHHHHHHHHTSSSEEEEEE
T ss_pred cCEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEEE
Confidence 47999999997544567789999999763 3 4566763
Done!