BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039415
(267 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 69 FLGRN--LHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT 126
FL R+ +H L YGPIY + +G+K +I+ L KEV+ + F+ R T
Sbjct: 24 FLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83
Query: 127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRD---EMRKIIRE--- 180
+ FA G+ WQ+ R+L + A +A +D ++ KII +
Sbjct: 84 LDIASNNRKGIAFADSGAHWQLHRRLAM----------ATFALFKDGDQKLEKIICQEIS 133
Query: 181 -----IYNKDSKAIDIGDIAYVTMINMVS 204
+ + ++IDI +V + N++S
Sbjct: 134 TLCDMLATHNGQSIDISFPVFVAVTNVIS 162
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131
+++ + + +L+ VYGP++ L+ G K +++ VKE + D +F+ R +
Sbjct: 31 KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRG-IFPLAERA 89
Query: 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNK 184
R VF++ G KW+ +R+ S L F +R +E R ++ E+
Sbjct: 90 NRGFGIVFSN-GKKWKEIRR------FSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT 142
Query: 185 DSKAIDIGDIAYVTMINMVSSMLW 208
+ D I N++ S+++
Sbjct: 143 KASPCDPTFILGCAPCNVICSIIF 166
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131
+++ + + +L+ VYGP++ L+ G K +++ VKE + D +F+ R +
Sbjct: 29 KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRG-IFPLAERA 87
Query: 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNK 184
R VF++ G KW+ +R+ S L F +R +E R ++ E+
Sbjct: 88 NRGFGIVFSN-GKKWKEIRR------FSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT 140
Query: 185 DSKAIDIGDIAYVTMINMVSSMLW 208
+ D I N++ S+++
Sbjct: 141 KASPCDPTFILGCAPCNVICSIIF 164
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 30/194 (15%)
Query: 85 YGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---S 141
YG I+ + I ++ V H + F RN I + Y VF +
Sbjct: 36 YGGIFTMNICGNRITVVGD-------VHQHSKFFTPRN-EILSPREVYSFMVPVFGEGVA 87
Query: 142 YGSKWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTM 199
Y + + +R+ F+ E L+ A F + E+RK ++ +NKD I+I D +
Sbjct: 88 YAAPYPRMREQLNFLAEELTVAKFQNFAPSIQHEVRKFMKANWNKDEGEINILDDCSAMI 147
Query: 200 INMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPN-----VSDFFPMLARFDLQG 254
IN L+G + R++ Q QLLA+ + F P + + L
Sbjct: 148 INTACQCLFGEDLRK----------RLDARQFAQLLAKMESCLIPAAVFLPWILKLPLPQ 197
Query: 255 VE--RDSKNVLQSI 266
RD++ LQ I
Sbjct: 198 SYRCRDARAELQDI 211
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131
+ L R + L YG ++ +++GS+ +++ ++E + D F+ R I
Sbjct: 30 KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRG-KIAVVDPI 88
Query: 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNK 184
++ +FA+ G +W+ LR+ S A + F +R +E R ++ E+
Sbjct: 89 FQGYGVIFAN-GERWRALRR------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKS 141
Query: 185 DSKAIDIGDIAYVTMINMVSSMLWG 209
+D + + N++ S+++G
Sbjct: 142 KGALLDNTLLFHSITSNIICSIVFG 166
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131
+ L R + L YG ++ +++GS+ +++ ++E + D F+ R I
Sbjct: 30 KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRG-KIAVVDPI 88
Query: 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNK 184
++ +FA+ G +W+ LR+ S A + F +R +E R ++ E+
Sbjct: 89 FQGYGVIFAN-GERWRALRR------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKS 141
Query: 185 DSKAIDIGDIAYVTMINMVSSMLWG 209
+D + + N++ S+++G
Sbjct: 142 KGALLDNTLLFHSITSNIICSIVFG 166
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131
+ L R + L YG ++ +++GS+ +++ ++E + D F+ R I
Sbjct: 30 KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRG-KIAVVDPI 88
Query: 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNK 184
++ +FA+ G +W+ LR+ S A + F +R +E R ++ E+
Sbjct: 89 FQGYGVIFAN-GERWRALRR------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKS 141
Query: 185 DSKAIDIGDIAYVTMINMVSSMLWG 209
+D + + N++ S+++G
Sbjct: 142 KGALLDNTLLFHSITSNIICSIVFG 166
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131
+ L R + L YG ++ +++GS+ +++ ++E + D F+ R I
Sbjct: 30 KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRG-KIAVVDPI 88
Query: 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNK 184
++ +FA+ G +W+ LR+ S A + F +R +E R ++ E+
Sbjct: 89 FQGYGVIFAN-GERWRALRR------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKS 141
Query: 185 DSKAIDIGDIAYVTMINMVSSMLWG 209
+D + + N++ S+++G
Sbjct: 142 KGALLDNTLLFHSITSNIICSIVFG 166
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131
+ L R + L YG ++ +++GS+ +++ ++E + D F+ R I
Sbjct: 30 KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRG-KIAVVDPI 88
Query: 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNK 184
++ +FA+ G +W+ LR+ S A + F +R +E R ++ E+
Sbjct: 89 FQGYGVIFAN-GERWRALRR------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKS 141
Query: 185 DSKAIDIGDIAYVTMINMVSSMLWG 209
+D + + N++ S+++G
Sbjct: 142 KGALLDNTLLFHSITSNIICSIVFG 166
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 66/144 (45%), Gaps = 15/144 (10%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131
+++ + + +L+ +YGP++ L+ G + +++ +VKE + D +F+ R +
Sbjct: 31 KDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRG-HFPLAERA 89
Query: 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNK 184
R VF++ G +W+ +R+ S L F +R +E R ++ E+
Sbjct: 90 NRGFGIVFSN-GKRWKEIRR------FSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT 142
Query: 185 DSKAIDIGDIAYVTMINMVSSMLW 208
+ D I N++ S+++
Sbjct: 143 KASPCDPTFILGCAPCNVICSIIF 166
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 88 IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---SYGS 144
++ + IG + I+ P +H R F+ RN I + Y VF +Y +
Sbjct: 44 VFTISIGGQRVTIVGDP-------HEHSRFFSPRN-EILSPREVYTIMTPVFGEGVAYAA 95
Query: 145 KWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202
+ +R+ F+ E L+ A F + E+RK + E + +D I++ + +IN
Sbjct: 96 PYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINT 155
Query: 203 VSSMLWG 209
L+G
Sbjct: 156 ACQCLFG 162
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 88 IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---SYGS 144
++ + IG + I+ P +H R F+ RN I + Y VF +Y +
Sbjct: 38 VFTISIGGQRVTIVGDP-------HEHSRFFSPRN-EILSPREVYTIMTPVFGEGVAYAA 89
Query: 145 KWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202
+ +R+ F+ E L+ A F + E+RK + E + +D I++ + +IN
Sbjct: 90 PYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINT 149
Query: 203 VSSMLWG 209
L+G
Sbjct: 150 ACQCLFG 156
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRN--PTITAST 129
+N+ + LA +GP++ L++GS+ +++ VKE + D+ +F+ R P A
Sbjct: 30 KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHA-- 87
Query: 130 LTYRASDTVFASYGSKWQILRKL 152
+R +F + G W+ +R+
Sbjct: 88 --HRDRGIIFNN-GPTWKDIRRF 107
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 88 IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---SYGS 144
++ + IG + I+ P +H R F+ RN I + Y VF +Y +
Sbjct: 53 VFTISIGGQRVTIVGDP-------HEHSRFFSPRN-EILSPREVYTIMTPVFGEGVAYAA 104
Query: 145 KWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202
+ +R+ F+ E L+ A F + E+RK + E + +D I++ + +IN
Sbjct: 105 PYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINT 164
Query: 203 VSSMLWG 209
L+G
Sbjct: 165 ACQCLFG 171
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 71 GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTL 130
GR L + +D A YGP+ ++ + K +I++SP VK+ + + +
Sbjct: 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFL---------MSTKYNKDSK 59
Query: 131 TYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR 171
YRA TVF +LF ++S+ N + ++ RR
Sbjct: 60 MYRALQTVFGE---------RLFGQGLVSECNYERWHKQRR 91
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/150 (18%), Positives = 64/150 (42%), Gaps = 14/150 (9%)
Query: 70 LGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAST 129
+G+ H LA YG ++++ +GS ++++ + + + FA+R P+ +
Sbjct: 26 VGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADR-PSFASFR 84
Query: 130 LTYRASDTVFASYGSKWQI--------LRKLFVHEVLSKANLDAFYAFRRDEMRKIIREI 181
+ F Y W++ +R F + S+ L+ E R+++ +
Sbjct: 85 VVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVL---SEARELVALL 141
Query: 182 Y--NKDSKAIDIGDIAYVTMINMVSSMLWG 209
+ D +D + V + N++S++ +G
Sbjct: 142 VRGSADGAFLDPRPLTVVAVANVMSAVCFG 171
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131
+++ + + + VYGP++ ++ G ++ VKE + D+ +F+ R + + +T
Sbjct: 30 KDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRIT 89
Query: 132 YRASDTVFASYGSKWQILRKL 152
+ +S G +W+ +R+
Sbjct: 90 KGLG--IISSNGKRWKEIRRF 108
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 73 NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTY 132
++ +M ++ YGP++ + +G + +++ VKE + D +F+ R T L +
Sbjct: 31 QMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWL-F 89
Query: 133 RASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNKD 185
+ F++ G + + LR+ S A L F +R +E +I +
Sbjct: 90 KGYGVAFSN-GERAKQLRR------FSIATLRGFGVGKRGIEERIQEEAGFLIDALRGTH 142
Query: 186 SKAIDIGDIAYVTMINMVSSMLWG 209
ID T+ N++SS+++G
Sbjct: 143 GANIDPTFFLSRTVSNVISSIVFG 166
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%)
Query: 69 FLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAS 128
L NL ++ L GP+Y+L +G + ++++S ++E + FA R +
Sbjct: 40 LLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYK 99
Query: 129 TLTYRASDTVFASYGSKWQILRKL 152
++ R D Y W+ +KL
Sbjct: 100 LVSQRCQDISLGDYSLLWKAHKKL 123
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 73 NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTY 132
++ +M ++ YGP++ + +G + +++ V+E + D +F+ R T + +
Sbjct: 31 QMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV-F 89
Query: 133 RASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNKD 185
+ VF++ G + + LR+ S A L F +R +E +I +
Sbjct: 90 KGYGVVFSN-GERAKQLRR------FSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTG 142
Query: 186 SKAIDIGDIAYVTMINMVSSMLWG 209
ID T+ N++SS+++G
Sbjct: 143 GANIDPTFFLSRTVSNVISSIVFG 166
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 73 NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTY 132
++ +M ++ YGP++ + +G + +++ V+E + D +F+ R T + +
Sbjct: 31 QMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV-F 89
Query: 133 RASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNKD 185
+ VF++ G + + LR+ S A L F +R +E +I +
Sbjct: 90 KGYGVVFSN-GERAKQLRR------FSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTG 142
Query: 186 SKAIDIGDIAYVTMINMVSSMLWG 209
ID T+ N++SS+++G
Sbjct: 143 GANIDPTFFLSRTVSNVISSIVFG 166
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 73 NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTY 132
++ +M ++ YGP++ + +G + +++ V+E + D +F+ R T + +
Sbjct: 31 QMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV-F 89
Query: 133 RASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNKD 185
+ VF++ G + + LR+ S A L F +R +E +I +
Sbjct: 90 KGYGVVFSN-GERAKQLRR------FSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTG 142
Query: 186 SKAIDIGDIAYVTMINMVSSMLWG 209
ID T+ N++SS+++G
Sbjct: 143 GANIDPTFFLSRTVSNVISSIVFG 166
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 73 NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTY 132
++ +M ++ YGP++ + +G + +++ V+E + D +F+ R T + +
Sbjct: 31 QMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV-F 89
Query: 133 RASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNKD 185
+ VF++ G + + LR+ S A L F +R +E +I +
Sbjct: 90 KGYGVVFSN-GERAKQLRR------FSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTG 142
Query: 186 SKAIDIGDIAYVTMINMVSSMLWG 209
ID T+ N++SS+++G
Sbjct: 143 GANIDPTFFLSRTVSNVISSIVFG 166
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 73 NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTY 132
++ +M ++ YGP++ + +G + +++ V+E + D +F+ R T + +
Sbjct: 31 QMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV-F 89
Query: 133 RASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYNKD 185
+ VF++ G + + LR+ S A L F +R +E +I +
Sbjct: 90 KGYGVVFSN-GERAKQLRR------FSIATLRDFGVGKRGIEERIQEEAGFLIDALRGTG 142
Query: 186 SKAIDIGDIAYVTMINMVSSMLWG 209
ID T+ N++SS+++G
Sbjct: 143 GANIDPTFFLSRTVSNVISSIVFG 166
>pdb|2L3S|A Chain A, Structure Of The Autoinhibited Crk
Length = 163
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 121 RNPTITASTLTYRASDTVFASY--GSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKII 178
R + + STLT D+ G + + ++ L FYA ++K +
Sbjct: 58 RPSSASVSTLTGGNQDSSHPQPLGGPEPGPYAQPSINTPLPNLQNGPFYARV---IQKRV 114
Query: 179 REIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKG 217
Y+K + A+++G++ VT INM S W G G++G
Sbjct: 115 PNAYDKTALALEVGELVKVTKINM--SGQWEGECNGKRG 151
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 88 IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---SYGS 144
I+ + I K I+ P +H R F RN ++ + Y VF +Y +
Sbjct: 39 IFTINIVGKRVTIVGDP-------HEHSRFFLPRNEVLSPREV-YSFMVPVFGEGVAYAA 90
Query: 145 KWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202
+ +R+ F+ E L+ A F + E+RK + ++KD I++ + +IN
Sbjct: 91 PYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINT 150
Query: 203 VSSMLWG 209
L+G
Sbjct: 151 ACQCLFG 157
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 88 IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---SYGS 144
I+ + I K I+ P +H R F RN ++ + Y VF +Y +
Sbjct: 41 IFTINIVGKRVTIVGDP-------HEHSRFFLPRNEVLSPREV-YSFMVPVFGEGVAYAA 92
Query: 145 KWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202
+ +R+ F+ E L+ A F + E+RK + ++KD I++ + +IN
Sbjct: 93 PYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINT 152
Query: 203 VSSMLWG 209
L+G
Sbjct: 153 ACQCLFG 159
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 88 IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---SYGS 144
I+ + I K I+ P +H R F RN ++ + Y VF +Y +
Sbjct: 40 IFTINIVGKRVTIVGDP-------HEHSRFFLPRNEVLSPREV-YSFMVPVFGEGVAYAA 91
Query: 145 KWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202
+ +R+ F+ E L+ A F + E+RK + ++KD I++ + +IN
Sbjct: 92 PYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINT 151
Query: 203 VSSMLWG 209
L+G
Sbjct: 152 ACQCLFG 158
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 88 IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---SYGS 144
I+ + I K I+ P +H R F RN ++ + Y VF +Y +
Sbjct: 53 IFTINIVGKRVTIVGDP-------HEHSRFFLPRNEVLSPREV-YSFMVPVFGEGVAYAA 104
Query: 145 KWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202
+ +R+ F+ E L+ A F + E+RK + ++KD I++ + +IN
Sbjct: 105 PYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINT 164
Query: 203 VSSMLWG 209
L+G
Sbjct: 165 ACQCLFG 171
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 88 IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---SYGS 144
I+ + I K I+ P +H R F RN ++ + Y VF +Y +
Sbjct: 53 IFTINIVGKRVTIVGDP-------HEHSRFFLPRNEVLSPREV-YSFMVPVFGEGVAYAA 104
Query: 145 KWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202
+ +R+ F+ E L+ A F + E+RK + ++KD I++ + +IN
Sbjct: 105 PYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINT 164
Query: 203 VSSMLWG 209
L+G
Sbjct: 165 ACQCLFG 171
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 88 IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFA---SYGS 144
I+ + I K I+ P +H R F RN ++ + Y VF +Y +
Sbjct: 40 IFTINIVGKRVTIVGDP-------HEHSRFFLPRNEVLSPREV-YSFMVPVFGEGVAYAA 91
Query: 145 KWQILRKL--FVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202
+ +R+ F+ E L+ A F + E+RK + ++KD I++ + +IN
Sbjct: 92 PYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINT 151
Query: 203 VSSMLWG 209
L+G
Sbjct: 152 ACQCLFG 158
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%)
Query: 70 LGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAST 129
LG+N H + ++ YG + ++ IGS +++S +++ + F R T++
Sbjct: 33 LGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTL 92
Query: 130 LTYRASDTVFASYGSKWQILRKL 152
+T S T G W R+L
Sbjct: 93 ITDGQSLTFSTDSGPVWAARRRL 115
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/145 (17%), Positives = 62/145 (42%), Gaps = 15/145 (10%)
Query: 71 GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTL 130
+++ + + + YGP++ +++G K +++ VKE + D +FA R +
Sbjct: 29 AKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGRGSVPILEKV 88
Query: 131 TYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR-------DEMRKIIREIYN 183
+ + F++ W+ +R+ S L F +R +E R ++ E+
Sbjct: 89 S-KGLGIAFSN-AKTWKEMRR------FSLMTLRNFGMGKRSIEDRIQEEARCLVEELRK 140
Query: 184 KDSKAIDIGDIAYVTMINMVSSMLW 208
++ D I N++ S+++
Sbjct: 141 TNASPCDPTFILGCAPCNVICSVIF 165
>pdb|2L3P|A Chain A, Structure Of The Prolyl Cis Isomer Of The Crk Protein
pdb|2L3Q|A Chain A, Structure Of The Prolyl Trans Isomer Of The Crk Protein
Length = 78
Score = 31.6 bits (70), Expect = 0.51, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 174 MRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKG 217
++K + Y+K + A+++G++ VT INM S W G G++G
Sbjct: 25 IQKRVPNAYDKTALALEVGELVKVTKINM--SGQWEGECNGKRG 66
>pdb|2DBK|A Chain A, Solution Structures Of The Sh3 Domain Of Human Crk-Like
Protein
Length = 88
Score = 30.4 bits (67), Expect = 1.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 182 YNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKG 217
Y+K + A+++GDI VT +N+ W G G KG
Sbjct: 30 YDKTALALEVGDIVKVTRMNINGQ--WEGEVNGRKG 63
>pdb|2BZX|A Chain A, Atomic Model Of Crkl-Sh3c Monomer
pdb|2BZY|A Chain A, Dimeric Of Crkl-Sh3c Domain
pdb|2BZY|B Chain B, Dimeric Of Crkl-Sh3c Domain
Length = 67
Score = 30.4 bits (67), Expect = 1.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 182 YNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKG 217
Y+K + A+++GDI VT +N+ W G G KG
Sbjct: 15 YDKTALALEVGDIVKVTRMNINGQ--WEGEVNGRKG 48
>pdb|2LQW|A Chain A, Solution Structure Of Phosphorylated Crkl
Length = 303
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 174 MRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKG 217
++K + Y+K + A+++GDI VT +N+ + W G G KG
Sbjct: 243 IQKRVPCAYDKTALALEVGDIVKVTRMNI--NGQWEGEVNGRKG 284
>pdb|2LQN|A Chain A, Solution Structure Of Crkl
Length = 303
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 174 MRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKG 217
++K + Y+K + A+++GDI VT +N+ + W G G KG
Sbjct: 243 IQKRVPCAYDKTALALEVGDIVKVTRMNI--NGQWEGEVNGRKG 284
>pdb|2EYZ|A Chain A, Ct10-Regulated Kinase Isoform Ii
Length = 304
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 174 MRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKG 217
++K + Y+K + A+++G++ VT IN+ S W G G++G
Sbjct: 243 IQKRVPNAYDKTALALEVGELVKVTKINV--SGQWEGECNGKRG 284
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 37/83 (44%)
Query: 70 LGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAST 129
LG+N H + ++ YG + ++ IGS +++S +++ + F R T +
Sbjct: 28 LGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTL 87
Query: 130 LTYRASDTVFASYGSKWQILRKL 152
++ S + G W R+L
Sbjct: 88 ISNGQSMSFSPDSGPVWAARRRL 110
>pdb|2EYX|A Chain A, C-Terminal Sh3 Domain Of Ct10-Regulated Kinase
Length = 67
Score = 29.6 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 174 MRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKG 217
++K + Y+K + A+++G++ VT IN+ S W G G++G
Sbjct: 12 IQKRVPNAYDKTALALEVGELVKVTKINV--SGQWEGECNGKRG 53
>pdb|2GGR|A Chain A, Solution Structure Of The C-Terminal Sh3 Domain Of C-Crkii
Length = 76
Score = 29.6 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 174 MRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKG 217
++K + Y+K + A+++G++ VT IN+ S W G G++G
Sbjct: 15 IQKRVPNAYDKTALALEVGELVKVTKINV--SGQWEGECNGKRG 56
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 84 VYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYG 143
VYG I+ L +G ++++ +VKE + FA+R P + + + + YG
Sbjct: 46 VYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR-PCLPLFMKMTKMGGLLNSRYG 104
Query: 144 SKWQILRKLFVH 155
W R+L V+
Sbjct: 105 RGWVDHRRLAVN 116
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 84 VYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYG 143
VYG I+ L +G ++++ +VKE + FA+R P + + + + YG
Sbjct: 46 VYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR-PCLPLFMKMTKMGGLLNSRYG 104
Query: 144 SKWQILRKLFV 154
W R+L V
Sbjct: 105 RGWVDHRRLAV 115
>pdb|2WAQ|B Chain B, The Complete Structure Of The Archaeal 13-Subunit Dna-
Directed Rna Polymerase
pdb|2WB1|B Chain B, The Complete Structure Of The Archaeal 13-Subunit Dna-
Directed Rna Polymerase
pdb|2WB1|R Chain R, The Complete Structure Of The Archaeal 13-Subunit Dna-
Directed Rna Polymerase
pdb|2Y0S|B Chain B, Crystal Structure Of Sulfolobus Shibatae Rna Polymerase In
P21 Space Group
pdb|2Y0S|R Chain R, Crystal Structure Of Sulfolobus Shibatae Rna Polymerase In
P21 Space Group
pdb|4AYB|B Chain B, Rnap At 3.2ang
pdb|4B1O|B Chain B, Archaeal Rnap-Dna Binary Complex At 4.32ang
pdb|4B1P|R Chain R, Archaeal Rnap-Dna Binary Complex At 4.32ang
Length = 1131
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%)
Query: 141 SYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIRE 180
S +W+++ F + L + +LD++ F R+++++II E
Sbjct: 9 SIDERWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDE 48
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,641,336
Number of Sequences: 62578
Number of extensions: 226355
Number of successful extensions: 569
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 545
Number of HSP's gapped (non-prelim): 45
length of query: 267
length of database: 14,973,337
effective HSP length: 97
effective length of query: 170
effective length of database: 8,903,271
effective search space: 1513556070
effective search space used: 1513556070
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)