Query 039415
Match_columns 267
No_of_seqs 182 out of 1840
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 09:27:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039415.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039415hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 6.6E-34 1.4E-38 236.3 24.2 215 49-264 22-241 (489)
2 PLN02687 flavonoid 3'-monooxyg 100.0 2.1E-30 4.5E-35 221.1 24.2 203 49-251 30-233 (517)
3 PLN03112 cytochrome P450 famil 100.0 1.6E-29 3.5E-34 215.7 24.8 222 29-250 8-233 (514)
4 PLN00110 flavonoid 3',5'-hydro 100.0 9.4E-29 2E-33 209.9 24.4 206 45-251 23-230 (504)
5 PLN03234 cytochrome P450 83B1; 100.0 8.1E-29 1.8E-33 210.8 23.4 202 45-248 20-224 (499)
6 PLN02183 ferulate 5-hydroxylas 100.0 1.6E-28 3.6E-33 209.4 22.9 197 48-250 31-227 (516)
7 PLN02971 tryptophan N-hydroxyl 100.0 7.1E-28 1.5E-32 206.4 24.9 165 49-213 53-222 (543)
8 PTZ00404 cytochrome P450; Prov 100.0 9.8E-28 2.1E-32 203.4 22.3 188 46-236 22-213 (482)
9 PLN02966 cytochrome P450 83A1 100.0 1.2E-27 2.7E-32 203.4 22.7 198 48-247 24-224 (502)
10 PLN02394 trans-cinnamate 4-mon 100.0 2.4E-26 5.2E-31 195.9 24.0 171 45-215 22-196 (503)
11 PLN02655 ent-kaurene oxidase 100.0 1.5E-26 3.2E-31 195.2 20.8 199 55-253 1-210 (466)
12 PLN00168 Cytochrome P450; Prov 100.0 6E-26 1.3E-30 193.8 23.6 164 49-214 31-201 (519)
13 PLN02290 cytokinin trans-hydro 99.9 1.8E-26 3.9E-31 197.2 16.6 161 49-214 38-222 (516)
14 PLN02500 cytochrome P450 90B1 99.9 1.9E-25 4E-30 189.7 18.3 160 48-213 33-198 (490)
15 KOG0158 Cytochrome P450 CYP3/C 99.9 5E-25 1.1E-29 181.5 19.5 175 38-216 16-197 (499)
16 PLN03018 homomethionine N-hydr 99.9 9.4E-24 2E-28 180.1 24.4 163 51-214 38-206 (534)
17 KOG0157 Cytochrome P450 CYP4/C 99.9 1.3E-24 2.8E-29 183.7 16.3 180 51-236 33-218 (497)
18 PLN02196 abscisic acid 8'-hydr 99.9 2.1E-24 4.7E-29 181.8 16.7 158 49-213 31-189 (463)
19 PF00067 p450: Cytochrome P450 99.9 9.8E-25 2.1E-29 184.0 12.9 193 55-251 1-202 (463)
20 PLN02774 brassinosteroid-6-oxi 99.9 6.1E-24 1.3E-28 179.2 16.8 159 49-213 27-186 (463)
21 PLN02169 fatty acid (omega-1)- 99.9 1.2E-22 2.7E-27 172.4 17.2 160 52-215 30-199 (500)
22 PLN03141 3-epi-6-deoxocathaste 99.9 6.8E-23 1.5E-27 172.4 15.5 159 49-213 3-167 (452)
23 KOG0159 Cytochrome P450 CYP11/ 99.9 1.1E-22 2.3E-27 165.0 15.8 212 49-264 46-273 (519)
24 PLN02302 ent-kaurenoic acid ox 99.9 3.2E-22 7E-27 170.3 19.1 159 48-213 37-203 (490)
25 PLN02738 carotene beta-ring hy 99.9 5.7E-22 1.2E-26 171.4 18.3 148 64-215 142-292 (633)
26 PLN02987 Cytochrome P450, fami 99.9 4.5E-22 9.7E-27 167.6 16.7 158 48-213 25-188 (472)
27 PLN03195 fatty acid omega-hydr 99.9 6.1E-22 1.3E-26 169.3 17.4 157 54-215 31-194 (516)
28 PLN02936 epsilon-ring hydroxyl 99.9 1.3E-21 2.9E-26 165.9 17.4 157 55-215 14-178 (489)
29 PLN02648 allene oxide synthase 99.8 3.5E-21 7.6E-26 161.6 9.4 160 49-214 13-194 (480)
30 PLN02426 cytochrome P450, fami 99.8 3.3E-17 7.2E-22 139.3 19.3 165 61-231 49-221 (502)
31 KOG0684 Cytochrome P450 [Secon 99.7 1.1E-16 2.4E-21 127.6 15.0 157 53-214 31-191 (486)
32 COG2124 CypX Cytochrome P450 [ 99.3 8.6E-11 1.9E-15 97.7 11.9 134 74-215 24-164 (411)
33 KOG0114 Predicted RNA-binding 81.4 11 0.00024 24.7 6.1 61 51-113 10-76 (124)
34 PF13625 Helicase_C_3: Helicas 54.8 40 0.00087 23.1 5.0 40 73-114 75-114 (129)
35 KOG3653 Transforming growth fa 50.2 1.1E+02 0.0024 26.5 7.4 38 83-120 221-258 (534)
36 PF02009 Rifin_STEVOR: Rifin/s 47.4 20 0.00044 28.8 2.8 18 30-47 266-283 (299)
37 PTZ00370 STEVOR; Provisional 47.3 21 0.00046 28.2 2.8 6 45-50 279-284 (296)
38 PRK02302 hypothetical protein; 36.0 1.2E+02 0.0025 19.4 4.3 34 79-113 21-54 (89)
39 PTZ00046 rifin; Provisional 35.1 48 0.001 27.3 3.2 18 31-48 326-343 (358)
40 TIGR01477 RIFIN variant surfac 34.9 49 0.0011 27.2 3.2 18 31-48 321-338 (353)
41 PRK02886 hypothetical protein; 31.9 1.4E+02 0.003 19.0 4.4 34 79-113 19-52 (87)
42 COG1707 ACT domain-containing 31.5 56 0.0012 23.6 2.7 40 71-110 153-197 (218)
43 PF13893 RRM_5: RNA recognitio 29.9 1.1E+02 0.0023 17.0 5.2 34 79-112 2-39 (56)
44 PRK12333 nucleoside triphospha 29.1 2.6E+02 0.0056 21.2 6.6 44 166-211 28-71 (204)
45 PF15330 SIT: SHP2-interacting 28.7 1.4E+02 0.003 19.9 4.0 10 61-70 46-55 (107)
46 PF05084 GRA6: Granule antigen 28.7 93 0.002 22.2 3.3 9 51-59 175-183 (215)
47 PF09926 DUF2158: Uncharacteri 27.9 57 0.0012 18.5 1.9 18 85-102 3-20 (53)
48 PRK15117 ABC transporter perip 24.6 3.2E+02 0.0069 20.8 6.6 64 168-232 29-101 (211)
49 PLN03134 glycine-rich RNA-bind 23.2 2.7E+02 0.0059 19.5 5.5 49 63-113 38-95 (144)
50 PRK10597 DNA damage-inducible 23.1 2E+02 0.0044 18.0 4.3 38 75-112 23-68 (81)
51 KOG4241 Mitochondrial ribosoma 23.0 79 0.0017 23.8 2.3 28 86-113 137-164 (245)
52 PF04530 Viral_Beta_CD: Viral 22.7 2.6E+02 0.0056 19.1 4.4 20 88-111 90-109 (122)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.6e-34 Score=236.33 Aligned_cols=215 Identities=31% Similarity=0.556 Sum_probs=185.5
Q ss_pred CCCCCCCCCCCCCcccccccccCCc-hHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC-ccc
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFLGRN-LHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP-TIT 126 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~-~~~ 126 (267)
+++.+.||||+++|++||++++... ++..+.++.++|||++.+++|..++||++|+++++|++++++..|++|+. ...
T Consensus 22 ~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~ 101 (489)
T KOG0156|consen 22 RKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTAT 101 (489)
T ss_pred cCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence 3348999999999999999999776 99999999999999999999999999999999999999999999999997 234
Q ss_pred ccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHH
Q 039415 127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-DSKAIDIGDIAYVTMINMVSS 205 (267)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~d~~~~~~~~~~~ii~~ 205 (267)
.+.+.+++.|++++.+|+.|+.+||+.....|+...++.....-.++++.+++.+... .++++|+.+.+..++.+||++
T Consensus 102 ~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~ 181 (489)
T KOG0156|consen 102 LKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICR 181 (489)
T ss_pred HHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHH
Confidence 4666666789999988999999999999888999999999888899999999999852 227899999999999999999
Q ss_pred HHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhc-cccccC-ccchHHHHHHHhh
Q 039415 206 MLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFP-MLARFD-LQGVERDSKNVLQ 264 (267)
Q Consensus 206 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~p-~~~~~~~~~~~~~ 264 (267)
++||.++...+ ++...++.+.+.+.....+.+.+.+++| ++++++ ..+.++.++....
T Consensus 182 ~~fG~rf~~~~-~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~ 241 (489)
T KOG0156|consen 182 MLFGRRFEEED-EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSK 241 (489)
T ss_pred HHhCCccccCC-chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHH
Confidence 99999999762 4556668899999999999888899999 677776 3345555555544
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.98 E-value=2.1e-30 Score=221.09 Aligned_cols=203 Identities=33% Similarity=0.605 Sum_probs=160.5
Q ss_pred CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAS 128 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~ 128 (267)
+++.+.||||.++|++||+..+..+++.++.+++++||+++++++|+.++|+++||++++++++++...|.+++......
T Consensus 30 ~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~ 109 (517)
T PLN02687 30 KHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAE 109 (517)
T ss_pred CCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchh
Confidence 34456799999999999998887778999999999999999999999999999999999999998877888876544333
Q ss_pred ccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHH
Q 039415 129 TLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-DSKAIDIGDIAYVTMINMVSSML 207 (267)
Q Consensus 129 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~d~~~~~~~~~~~ii~~~~ 207 (267)
.+...+.+++++.+|+.|+++||+++.++|+.++++.+.+.+.++++++++.|... +++++|+.+.+..+++|+++.++
T Consensus 110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~ 189 (517)
T PLN02687 110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAM 189 (517)
T ss_pred hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence 33322345566656999999999995478999999999999999999999999753 45689999999999999999999
Q ss_pred hcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhccccccC
Q 039415 208 WGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFD 251 (267)
Q Consensus 208 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p 251 (267)
||.++...+.++....+.+.+..+....+......++|++.+++
T Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~ 233 (517)
T PLN02687 190 VGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLD 233 (517)
T ss_pred hCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhC
Confidence 99987543213344567777766665444322335667655554
No 3
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.97 E-value=1.6e-29 Score=215.74 Aligned_cols=222 Identities=28% Similarity=0.518 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHH
Q 039415 29 ILFSTVAVICFLWPFFMKVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVK 108 (267)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~ 108 (267)
++++++++.++++.+.+.+..++.+.||||+++|++||+..+..+++.++.+++++||+++++++++.++|+++||++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~ 87 (514)
T PLN03112 8 LLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIR 87 (514)
T ss_pred HHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHH
Confidence 44444444445545556666777789999999999999988877789999999999999999999999999999999999
Q ss_pred HHHHhcccccCCCCCcccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CC
Q 039415 109 EVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DS 186 (267)
Q Consensus 109 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~ 186 (267)
+|+.+++..|.+++..........+..+.++..+|+.|+++||++.+++|+.++++.+.+.+.++++.+++.+... ++
T Consensus 88 ~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~ 167 (514)
T PLN03112 88 EILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTG 167 (514)
T ss_pred HHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Confidence 9998888888887654322221222123334445999999999965578999999999999999999999987543 45
Q ss_pred CceeHHHHHHHHHHHHHHHHHhcCccCCCC--CchHHHHHHHHHHHHHHhhcCCcccchhcccccc
Q 039415 187 KAIDIGDIAYVTMINMVSSMLWGGTTQGEK--GTSLAAEFRVEVSQALQLLARPNVSDFFPMLARF 250 (267)
Q Consensus 187 ~~~d~~~~~~~~~~~ii~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~ 250 (267)
+++|+.+.++++++|++++++||.++.... ......++.+.+..+...........++|++.++
T Consensus 168 ~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 233 (514)
T PLN03112 168 KPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWL 233 (514)
T ss_pred CeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhc
Confidence 689999999999999999999999874332 1133455666666665543322344456765544
No 4
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.97 E-value=9.4e-29 Score=209.95 Aligned_cols=206 Identities=30% Similarity=0.540 Sum_probs=159.6
Q ss_pred hhcCCCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCc
Q 039415 45 MKVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPT 124 (267)
Q Consensus 45 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~ 124 (267)
.....++.+.||||+++|++||++.+..+++.++.+++++||+++++++|+.++|+++||++++++++++...|.+++..
T Consensus 23 ~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~ 102 (504)
T PLN00110 23 SLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPN 102 (504)
T ss_pred HHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCc
Confidence 34456677889999999999998888767889999999999999999999999999999999999999887788887754
Q ss_pred ccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHH
Q 039415 125 ITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINM 202 (267)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~i 202 (267)
........++.+.+++.+|+.|+++|+.++.++|+.++++.+.+.+.++++.+++.+.+. +|+++|+.+.+..+++|+
T Consensus 103 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~v 182 (504)
T PLN00110 103 AGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANM 182 (504)
T ss_pred cchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHH
Confidence 322222222233444445999999999997357999999999999999999999998653 567899999999999999
Q ss_pred HHHHHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhccccccC
Q 039415 203 VSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFD 251 (267)
Q Consensus 203 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p 251 (267)
|++++||.+....+ +....++.+++...........+..++|++.+++
T Consensus 183 i~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~ 230 (504)
T PLN00110 183 IGQVILSRRVFETK-GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMD 230 (504)
T ss_pred HHHHHhCCcccccC-chhHHHHHHHHHHHHHHhccccHHHHcchHhhhC
Confidence 99999999873221 2233556676666655444333445677666554
No 5
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.97 E-value=8.1e-29 Score=210.83 Aligned_cols=202 Identities=25% Similarity=0.459 Sum_probs=156.9
Q ss_pred hhcCCCCCCCCCCCCCCcccccccccC-CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC
Q 039415 45 MKVGKGNSQLPPGPRGLPLVVYLPFLG-RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP 123 (267)
Q Consensus 45 ~~~~~~~~~~~pgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~ 123 (267)
+...+++.+.||||+++|++||+..+. .++..++.+++++||+++++++|+.++|+++||+++++|+.+++..|.+++.
T Consensus 20 ~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~ 99 (499)
T PLN03234 20 RSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPL 99 (499)
T ss_pred HHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCC
Confidence 445567778899999999999998884 4788899999999999999999999999999999999999988778888775
Q ss_pred cccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHH
Q 039415 124 TITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMIN 201 (267)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ 201 (267)
..........+.++.+...++.|+++|+.+..++|++++++.+.+.+.++++++++.|.+. +++++|+.+.+..+++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~d 179 (499)
T PLN03234 100 LKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNC 179 (499)
T ss_pred chhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHH
Confidence 4332222221234434445889999999864499999999999999999999999999653 46789999999999999
Q ss_pred HHHHHHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhcccc
Q 039415 202 MVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLA 248 (267)
Q Consensus 202 ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 248 (267)
++++++||.+++.. +....++.+.+.+.....+.......+|++.
T Consensus 180 vi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 224 (499)
T PLN03234 180 VVCRQAFGKRYNEY--GTEMKRFIDILYETQALLGTLFFSDLFPYFG 224 (499)
T ss_pred HHHHHHhCCccccc--chhHHHHHHHHHHHHHHcCCCcHHHHhhHHH
Confidence 99999999988754 3344556666665544333322344556543
No 6
>PLN02183 ferulate 5-hydroxylase
Probab=99.97 E-value=1.6e-28 Score=209.40 Aligned_cols=197 Identities=28% Similarity=0.551 Sum_probs=150.1
Q ss_pred CCCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 039415 48 GKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA 127 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~ 127 (267)
..++.+.||||+++|++|++..+....+.++.+++++||++|++++|+.++|+++||+++++|+.+++..|.+++.....
T Consensus 31 ~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 110 (516)
T PLN02183 31 LRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI 110 (516)
T ss_pred ccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence 34456789999999999999877655677899999999999999999999999999999999999887778877653333
Q ss_pred cccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Q 039415 128 STLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSML 207 (267)
Q Consensus 128 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~ 207 (267)
.....++.+.++..+|+.|+++|+++..++|+.++++.+.+. .++++.+++.|....++++|+.+++.++++|++++++
T Consensus 111 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~ 189 (516)
T PLN02183 111 SYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAA 189 (516)
T ss_pred hccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHh
Confidence 323222223444445999999999953499999999998885 5688999999965346789999999999999999999
Q ss_pred hcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhcccccc
Q 039415 208 WGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARF 250 (267)
Q Consensus 208 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~ 250 (267)
||.+.+.. + .++.+.+..+...........++|++.++
T Consensus 190 fG~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 227 (516)
T PLN02183 190 FGSSSNEG--Q---DEFIKILQEFSKLFGAFNVADFIPWLGWI 227 (516)
T ss_pred hcCcccch--H---HHHHHHHHHHHHHhCCccHHHhcchhHhc
Confidence 99876542 1 34555555554443333344566766554
No 7
>PLN02971 tryptophan N-hydroxylase
Probab=99.96 E-value=7.1e-28 Score=206.38 Aligned_cols=165 Identities=23% Similarity=0.407 Sum_probs=133.1
Q ss_pred CCCCCCCCCCCCCcccccccccCC-c-hHHHHHHHHHHhC-CeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFLGR-N-LHRIVMDLAIVYG-PIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI 125 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~~~-~-~~~~~~~~~~~yG-~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~ 125 (267)
.++.+.||||+++|++||+..+.. . .+.++.++.++|| +++++++|+.++|+++||+++++++.+++..|.+++...
T Consensus 53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~ 132 (543)
T PLN02971 53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY 132 (543)
T ss_pred CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence 445678999999999999988732 2 3678899999999 899999999999999999999999998888898887543
Q ss_pred cccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHH
Q 039415 126 TASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMV 203 (267)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii 203 (267)
....++.+..++++..+|+.|+++||+++.+.+++..++.+.+.+.++++.+++.+... +++++|+.+.+.++++|++
T Consensus 133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi 212 (543)
T PLN02971 133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI 212 (543)
T ss_pred chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence 33333322123455556999999999997466777777788888888888888877542 3567999999999999999
Q ss_pred HHHHhcCccC
Q 039415 204 SSMLWGGTTQ 213 (267)
Q Consensus 204 ~~~~fG~~~~ 213 (267)
++++||.+..
T Consensus 213 ~~~~fG~~~~ 222 (543)
T PLN02971 213 KRLMFGTRTF 222 (543)
T ss_pred HHHHhCCccc
Confidence 9999999874
No 8
>PTZ00404 cytochrome P450; Provisional
Probab=99.96 E-value=9.8e-28 Score=203.38 Aligned_cols=188 Identities=20% Similarity=0.325 Sum_probs=153.1
Q ss_pred hcCCCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 039415 46 KVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI 125 (267)
Q Consensus 46 ~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~ 125 (267)
.+.+.+...+|||+++|++||+..+..+++..+.+++++||+++++++|+.++|+++||+++++|+.++...|.+++...
T Consensus 22 ~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~ 101 (482)
T PTZ00404 22 KYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIP 101 (482)
T ss_pred HhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence 33455677899999999999998887788999999999999999999999999999999999999987766777766443
Q ss_pred cccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHH
Q 039415 126 TASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMV 203 (267)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii 203 (267)
....... ++|++..+ |+.|+++|++++ ++|+.++++.+.+.+.+.++.+++.|.+. .++++|+.+++.++++|++
T Consensus 102 ~~~~~~~-~~~l~~~~-g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi 178 (482)
T PTZ00404 102 SIKHGTF-YHGIVTSS-GEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAM 178 (482)
T ss_pred eeeeecc-CCceeccC-hHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHH
Confidence 3222222 46777776 999999999996 99999999999999999999999999653 4567999999999999999
Q ss_pred HHHHhcCccCCCCC--chHHHHHHHHHHHHHHhhc
Q 039415 204 SSMLWGGTTQGEKG--TSLAAEFRVEVSQALQLLA 236 (267)
Q Consensus 204 ~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 236 (267)
++++||.+++..+. ++....+.+.+.+++....
T Consensus 179 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (482)
T PTZ00404 179 FKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLG 213 (482)
T ss_pred HHHHhccccccccccchhHHHHHHHHHHHHHHHhC
Confidence 99999998865321 1233556666666665544
No 9
>PLN02966 cytochrome P450 83A1
Probab=99.96 E-value=1.2e-27 Score=203.45 Aligned_cols=198 Identities=27% Similarity=0.449 Sum_probs=153.0
Q ss_pred CCCCCCCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 039415 48 GKGNSQLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT 126 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~ 126 (267)
..++.+.||||+++|++||+..+ ..++..++.+++++||+++++++|+.++|+++||+++++|+.+++..|.+++....
T Consensus 24 ~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~ 103 (502)
T PLN02966 24 KTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG 103 (502)
T ss_pred ccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence 34455789999999999999888 55788999999999999999999999999999999999999887777776654332
Q ss_pred ccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHH
Q 039415 127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMVS 204 (267)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii~ 204 (267)
......+..++.+..+|+.|+++|+++.+++|++++++.+.+.+.+.++++++.|... +++++|+.+.+..+++|+++
T Consensus 104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~ 183 (502)
T PLN02966 104 HEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVC 183 (502)
T ss_pred ceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHH
Confidence 2222222233444445899999999943599999999999999999999999999753 35679999999999999999
Q ss_pred HHHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhccc
Q 039415 205 SMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPML 247 (267)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 247 (267)
.++||.+++.. ++...++.+.+..............++|++
T Consensus 184 ~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 224 (502)
T PLN02966 184 RQAFGKKYNED--GEEMKRFIKILYGTQSVLGKIFFSDFFPYC 224 (502)
T ss_pred HHHhCCccCcc--chHHHHHHHHHHHHHHHhCcccHHHhhchh
Confidence 99999988754 334455666666555444433234455643
No 10
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.95 E-value=2.4e-26 Score=195.92 Aligned_cols=171 Identities=22% Similarity=0.462 Sum_probs=140.9
Q ss_pred hhcCCCCCCCCCCCCCCcccccccccCCc-hHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC
Q 039415 45 MKVGKGNSQLPPGPRGLPLVVYLPFLGRN-LHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP 123 (267)
Q Consensus 45 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~ 123 (267)
+....++.+.||||+++|++|++..+..+ .+..+.+++++||+++++++|+.++|+++||+.+++|+.+++..|.+++.
T Consensus 22 ~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~ 101 (503)
T PLN02394 22 SKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTR 101 (503)
T ss_pred HHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCC
Confidence 44456778899999999999999888544 57889999999999999999999999999999999999877777877654
Q ss_pred cccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc---CCCceeHHHHHHHHHH
Q 039415 124 TITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK---DSKAIDIGDIAYVTMI 200 (267)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~~d~~~~~~~~~~ 200 (267)
......+.+.+.+.++..+|+.|+++||.++.+.|++++++.+.+.++++++++++.|.+. .++.+|+.+.++.+++
T Consensus 102 ~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~ 181 (503)
T PLN02394 102 NVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMY 181 (503)
T ss_pred cchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHH
Confidence 3333333332334455545999999999985589999999999999999999999999754 2346899999999999
Q ss_pred HHHHHHHhcCccCCC
Q 039415 201 NMVSSMLWGGTTQGE 215 (267)
Q Consensus 201 ~ii~~~~fG~~~~~~ 215 (267)
|++++++||.+++..
T Consensus 182 dvi~~~~fG~~~~~~ 196 (503)
T PLN02394 182 NIMYRMMFDRRFESE 196 (503)
T ss_pred HHHHHHHhCCCcccc
Confidence 999999999998754
No 11
>PLN02655 ent-kaurene oxidase
Probab=99.95 E-value=1.5e-26 Score=195.17 Aligned_cols=199 Identities=19% Similarity=0.302 Sum_probs=150.3
Q ss_pred CCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccC
Q 039415 55 PPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYR 133 (267)
Q Consensus 55 ~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~ 133 (267)
||||+++|++||++++ ..+++.++.+++++||++|++++|+.++|+++||+++++|+.++...|.+++.......+.++
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~ 80 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD 80 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence 7899999999999888 456899999999999999999999999999999999999999888888877643333333333
Q ss_pred CcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc----CCCceeHHHHHHHHHHHHHHHHHhc
Q 039415 134 ASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK----DSKAIDIGDIAYVTMINMVSSMLWG 209 (267)
Q Consensus 134 ~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~----~~~~~d~~~~~~~~~~~ii~~~~fG 209 (267)
+..+++.++|+.|+++||.+.++.|+...++.+.+.+.+.++.+++.+.+. .++++|+.+.++++++|+++.++||
T Consensus 81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 160 (466)
T PLN02655 81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG 160 (466)
T ss_pred CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence 334556556899999998776577888888888898888888888887543 3567999999999999999999999
Q ss_pred CccCCCCCchH------HHHHHHHHHHHHHhhcCCcccchhccccccCcc
Q 039415 210 GTTQGEKGTSL------AAEFRVEVSQALQLLARPNVSDFFPMLARFDLQ 253 (267)
Q Consensus 210 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~ 253 (267)
.+++..+.++. ...+...+...+.......+.+++|+++++|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~ 210 (466)
T PLN02655 161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNK 210 (466)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCch
Confidence 98775421111 122333344444433333344577877777643
No 12
>PLN00168 Cytochrome P450; Provisional
Probab=99.95 E-value=6e-26 Score=193.82 Aligned_cols=164 Identities=24% Similarity=0.454 Sum_probs=134.7
Q ss_pred CCCCCCCCCCCCCcccccccccC---CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFLG---RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI 125 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~~---~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~ 125 (267)
++..+.||||+++|++||+..+. .+++.++.+++++||++|++++|+.++|+++||+++++++++++..|.+++...
T Consensus 31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~ 110 (519)
T PLN00168 31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA 110 (519)
T ss_pred CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence 34557899999999999987652 357888999999999999999999999999999999999998888888876543
Q ss_pred cccccccCCcceEe-ccCCcchHHHHH-HHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHH
Q 039415 126 TASTLTYRASDTVF-ASYGSKWQILRK-LFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMIN 201 (267)
Q Consensus 126 ~~~~~~~~~~~~~~-~~~g~~w~~~R~-~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ 201 (267)
....++.+ .+++. ..+|+.|+++|| ++ .++|+.++++.+.+.+.++++.+++.|.+. .++++|+.+.+..++.+
T Consensus 111 ~~~~~~~~-~~~~~~~~~G~~Wk~~Rr~~~-~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ 188 (519)
T PLN00168 111 SSRLLGES-DNTITRSSYGPVWRLLRRNLV-AETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFC 188 (519)
T ss_pred chhhhccC-CCceeCCCCCHHHHHHHHHHH-HhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHH
Confidence 33333322 23443 245999999987 56 499999999999999999999999999764 23468999999999999
Q ss_pred HHHHHHhcCccCC
Q 039415 202 MVSSMLWGGTTQG 214 (267)
Q Consensus 202 ii~~~~fG~~~~~ 214 (267)
+++.++||.+++.
T Consensus 189 ii~~~~fG~~~~~ 201 (519)
T PLN00168 189 LLVLMCFGERLDE 201 (519)
T ss_pred HHHHHHcCCCcCh
Confidence 9999999998763
No 13
>PLN02290 cytokinin trans-hydroxylase
Probab=99.95 E-value=1.8e-26 Score=197.17 Aligned_cols=161 Identities=13% Similarity=0.260 Sum_probs=130.7
Q ss_pred CCCCCCCCCCCCCcccccccccCC-------------------chHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHH
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFLGR-------------------NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKE 109 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~~~-------------------~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~ 109 (267)
+...+.||||+++|++||+..+.. +....+.+|+++||++|++++|+.++|+++||+++++
T Consensus 38 ~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~ 117 (516)
T PLN02290 38 IMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKE 117 (516)
T ss_pred HHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHH
Confidence 445677999999999999887631 2223568899999999999999999999999999999
Q ss_pred HHHhcccccCCCCCccc--ccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--C
Q 039415 110 VVRDHDRKFANRNPTIT--ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--D 185 (267)
Q Consensus 110 il~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~ 185 (267)
|+.++. .+..++.... ..... +.++++++ |+.|+++||+++ ++|+.++++.+.+.+.++++++++.|.+. .
T Consensus 118 il~~~~-~~~~r~~~~~~~~~~~~--g~~l~~~~-g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~ 192 (516)
T PLN02290 118 LLTKYN-TVTGKSWLQQQGTKHFI--GRGLLMAN-GADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVES 192 (516)
T ss_pred HHhcCC-CCCCCcchhhhHHHHHh--cCCccccC-chHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 998763 3444442211 11122 36777776 999999999997 99999999999999999999999999753 2
Q ss_pred C-CceeHHHHHHHHHHHHHHHHHhcCccCC
Q 039415 186 S-KAIDIGDIAYVTMINMVSSMLWGGTTQG 214 (267)
Q Consensus 186 ~-~~~d~~~~~~~~~~~ii~~~~fG~~~~~ 214 (267)
+ .++|+.+.+.++++|++++++||.+++.
T Consensus 193 ~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~ 222 (516)
T PLN02290 193 GQTEVEIGEYMTRLTADIISRTEFDSSYEK 222 (516)
T ss_pred CCceEEhHHHHHHHHHHHHHHHHcCCcccc
Confidence 3 4799999999999999999999998764
No 14
>PLN02500 cytochrome P450 90B1
Probab=99.94 E-value=1.9e-25 Score=189.72 Aligned_cols=160 Identities=15% Similarity=0.179 Sum_probs=129.9
Q ss_pred CCCCCCCCCCCCCCccccccccc-C----CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCC
Q 039415 48 GKGNSQLPPGPRGLPLVVYLPFL-G----RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRN 122 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~G~~~~~-~----~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~ 122 (267)
..++.+.||||+++|++||+..+ . ..++.++.+++++||+++++++|+.++|+++||+++++|+.+++..|.++.
T Consensus 33 ~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~ 112 (490)
T PLN02500 33 KQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY 112 (490)
T ss_pred ccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence 34556789999999999997643 1 346678899999999999999999999999999999999988776675443
Q ss_pred CcccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHH-HHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHH
Q 039415 123 PTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDA-FYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMIN 201 (267)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ 201 (267)
...... ..+ +.++++.+ |+.|+++|++++ ++|++.+++. +.+.+.+.+..+++.|.. ++++|+.+.+.++++|
T Consensus 113 ~~~~~~-~~g-~~~~~~~~-g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~ 186 (490)
T PLN02500 113 PRSIGG-ILG-KWSMLVLV-GDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTFN 186 (490)
T ss_pred chHHHH-HhC-cccccccC-CHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHHH
Confidence 222112 222 24677776 999999999997 9999999987 567888888888888865 5679999999999999
Q ss_pred HHHHHHhcCccC
Q 039415 202 MVSSMLWGGTTQ 213 (267)
Q Consensus 202 ii~~~~fG~~~~ 213 (267)
++++++||.+.+
T Consensus 187 vi~~~~fg~~~~ 198 (490)
T PLN02500 187 LMAKHIMSMDPG 198 (490)
T ss_pred HHHHHHhCCCCC
Confidence 999999998754
No 15
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=5e-25 Score=181.49 Aligned_cols=175 Identities=19% Similarity=0.340 Sum_probs=140.3
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCccccccccc--CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcc
Q 039415 38 CFLWPFFMKVGKGNSQLPPGPRGLPLVVYLPFL--GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHD 115 (267)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~ 115 (267)
++|..+++...++.++.+|+|++.|++||+..+ .+.+.....+...++||+++++.+..|.++|.|||++++|+.++.
T Consensus 16 l~y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F 95 (499)
T KOG0158|consen 16 LLYLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDF 95 (499)
T ss_pred HHHHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhC
Confidence 344344455556777799999999999999998 333344444444445999999999999999999999999999999
Q ss_pred cccCCCC--Cccccc-ccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcC--CCcee
Q 039415 116 RKFANRN--PTITAS-TLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKD--SKAID 190 (267)
Q Consensus 116 ~~~~~~~--~~~~~~-~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~--~~~~d 190 (267)
++|.++. ....-. .+. ..++++.. |+.||+.|..++ |.|++.+++.+.+.+++.++++++.+.++. +..++
T Consensus 96 ~~F~~r~~~~~~d~~~~l~--~~~Lf~~~-g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~ 171 (499)
T KOG0158|consen 96 DNFYNRKRPIYGDPEDPLS--ALNLFFLR-GERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGE 171 (499)
T ss_pred ccCcCCCCCCcCCCCCccc--ccCchhcc-CchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCcc
Confidence 9999843 322222 111 24566666 999999999997 999999999999999999999999998852 24789
Q ss_pred HHHHHHHHHHHHHHHHHhcCccCCCC
Q 039415 191 IGDIAYVTMINMVSSMLWGGTTQGEK 216 (267)
Q Consensus 191 ~~~~~~~~~~~ii~~~~fG~~~~~~~ 216 (267)
+.+.+.++|.|||++++||.+.+...
T Consensus 172 ~~dl~~~yT~DVI~~~AfG~~~~s~~ 197 (499)
T KOG0158|consen 172 IKDLCARYTTDVIGSCAFGLDANSLR 197 (499)
T ss_pred HHHHHHHHHHHHHhHhhcccchhhhc
Confidence 99999999999999999999998874
No 16
>PLN03018 homomethionine N-hydroxylase
Probab=99.93 E-value=9.4e-24 Score=180.09 Aligned_cols=163 Identities=21% Similarity=0.287 Sum_probs=126.1
Q ss_pred CCCCCCCCCCCcccccccccC-CchH-HHHHHHHHHh-CCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 039415 51 NSQLPPGPRGLPLVVYLPFLG-RNLH-RIVMDLAIVY-GPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA 127 (267)
Q Consensus 51 ~~~~~pgp~~~p~~G~~~~~~-~~~~-~~~~~~~~~y-G~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~ 127 (267)
+.+.||||+++|++||++.+. .++. .++.++.++| |+|+++++|+.++|+++||+++++++++++..|.+++.....
T Consensus 38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~ 117 (534)
T PLN03018 38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM 117 (534)
T ss_pred CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence 345799999999999998873 2232 3455666666 799999999999999999999999999888889888754443
Q ss_pred cccccCCcceEeccCCcchHHHHHHHHHhhcChhhH-HHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHH
Q 039415 128 STLTYRASDTVFASYGSKWQILRKLFVHEVLSKANL-DAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMVS 204 (267)
Q Consensus 128 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l-~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii~ 204 (267)
..+..++.++++..+|+.|+++|++++ +.|...+. +.+.+.+.++++++++.+... .++++|+.+.+.++++|+++
T Consensus 118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~ 196 (534)
T PLN03018 118 ETIGDNYKSMGTSPYGEQFMKMKKVIT-TEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTM 196 (534)
T ss_pred hhhccCCCceEecCCCHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHH
Confidence 333322235777766999999999997 87654444 444455566788899888753 34579999999999999999
Q ss_pred HHHhcCccCC
Q 039415 205 SMLWGGTTQG 214 (267)
Q Consensus 205 ~~~fG~~~~~ 214 (267)
+++||.+++.
T Consensus 197 ~~~fG~~~~~ 206 (534)
T PLN03018 197 RMLFGRRHVT 206 (534)
T ss_pred HHHhCCcccc
Confidence 9999998753
No 17
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.93 E-value=1.3e-24 Score=183.66 Aligned_cols=180 Identities=21% Similarity=0.424 Sum_probs=145.2
Q ss_pred CCCCCCCCCCCccccccccc-C--CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc-c
Q 039415 51 NSQLPPGPRGLPLVVYLPFL-G--RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI-T 126 (267)
Q Consensus 51 ~~~~~pgp~~~p~~G~~~~~-~--~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~-~ 126 (267)
....||||+++|++|++..+ . .+...+..++..+||++|+.|+|+.++|+++||+.+++|+.++...+.+.+.+. .
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 66789999999999999988 2 356778899999999999999999999999999999999975555565555444 4
Q ss_pred ccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHH
Q 039415 127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-DSKAIDIGDIAYVTMINMVSS 205 (267)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~d~~~~~~~~~~~ii~~ 205 (267)
...+. |+|+++++ |+.|+++||+++ ++|+.+.++.+...+.+.+..++..+... +++.+|++++++++++|++|+
T Consensus 113 ~~~~l--G~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~ 188 (497)
T KOG0157|consen 113 LKPWL--GDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK 188 (497)
T ss_pred HHHHh--cCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence 44455 46999998 999999999997 99999999999999999999988877654 344499999999999999999
Q ss_pred HHhcCcc-CCCCCchHHHHHHHHHHHHHHhhc
Q 039415 206 MLWGGTT-QGEKGTSLAAEFRVEVSQALQLLA 236 (267)
Q Consensus 206 ~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 236 (267)
++||... +.+ .+...++.+++........
T Consensus 189 ~~~G~~~~~~~--~~~~~~~~~a~~~~~~~~~ 218 (497)
T KOG0157|consen 189 TAMGPESLDAE--GPELFEYVQAFDDLTELIS 218 (497)
T ss_pred HhcCCcccccc--CCcccHHHHHHHHHHHHHH
Confidence 9999333 222 3344566666665555444
No 18
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.92 E-value=2.1e-24 Score=181.84 Aligned_cols=158 Identities=17% Similarity=0.195 Sum_probs=131.9
Q ss_pred CCCCCCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA 127 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~ 127 (267)
.++.+.||||+++|++||+..+ ..+++.++.+++++||+++++++++.++|+++||+++++|+.++...|... .....
T Consensus 31 ~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~-~~~~~ 109 (463)
T PLN02196 31 STKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPT-FPASK 109 (463)
T ss_pred CCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccccc-CchHH
Confidence 4456778889899999998776 678899999999999999999999999999999999999998776666321 11111
Q ss_pred cccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Q 039415 128 STLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSML 207 (267)
Q Consensus 128 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~ 207 (267)
.... ++.++++.+ |+.|+++||+++ +.|++++++.+.+.+.+.++++++.|. ++++|+.+.+..+++|+++.++
T Consensus 110 ~~~~-g~~~l~~~~-g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~ 183 (463)
T PLN02196 110 ERML-GKQAIFFHQ-GDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSI 183 (463)
T ss_pred HHHc-CcccccccC-cHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHH
Confidence 2222 224677776 999999999997 999999999999999999999999885 3579999999999999999999
Q ss_pred hcCccC
Q 039415 208 WGGTTQ 213 (267)
Q Consensus 208 fG~~~~ 213 (267)
||.+..
T Consensus 184 fG~~~~ 189 (463)
T PLN02196 184 FGKDEV 189 (463)
T ss_pred cCCCCc
Confidence 998753
No 19
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.92 E-value=9.8e-25 Score=183.99 Aligned_cols=193 Identities=24% Similarity=0.461 Sum_probs=152.9
Q ss_pred CCCCCCCcccccccccC--CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccc--c
Q 039415 55 PPGPRGLPLVVYLPFLG--RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAST--L 130 (267)
Q Consensus 55 ~pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~--~ 130 (267)
||||+++|++||+..+. .+++.++.+++++||+||++++++.++++++||+++++|+.+++..+..++....... .
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 79999999999999984 7788999999999999999999999999999999999999887666665433222221 1
Q ss_pred ccCCcceEeccCCcchHHHHHHHHHhhcChh-hHHHHHHHHHHHHHHHHHHHHhcCC--CceeHHHHHHHHHHHHHHHHH
Q 039415 131 TYRASDTVFASYGSKWQILRKLFVHEVLSKA-NLDAFYAFRRDEMRKIIREIYNKDS--KAIDIGDIAYVTMINMVSSML 207 (267)
Q Consensus 131 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~-~l~~~~~~~~~~~~~~~~~l~~~~~--~~~d~~~~~~~~~~~ii~~~~ 207 (267)
...+.++++.+ |+.|+.+|++++ +.|+.. .+ .+.+.+.+.++.+++.|....+ +++|+.+.++.+++|++++++
T Consensus 81 ~~~~~~l~~~~-~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~ 157 (463)
T PF00067_consen 81 PFGGKGLFFSD-GERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL 157 (463)
T ss_dssp HHTTTSSTTSS-HHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccc-cccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence 12246777777 899999999997 999988 66 8999999999999999987632 369999999999999999999
Q ss_pred hcCccCCCCCchHHHHHHHHHHHHHHhhcCC--cccchhccccccC
Q 039415 208 WGGTTQGEKGTSLAAEFRVEVSQALQLLARP--NVSDFFPMLARFD 251 (267)
Q Consensus 208 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~p 251 (267)
||.+++..+ ++...++.+.+.++....... .+...+|+++++|
T Consensus 158 fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 202 (463)
T PF00067_consen 158 FGKDFGSLD-DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP 202 (463)
T ss_dssp HSSHHHGTT-HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS
T ss_pred ccceeeecc-cccccccccccccccccccccccccccccccccccc
Confidence 999987543 343456666666665544221 2445667777766
No 20
>PLN02774 brassinosteroid-6-oxidase
Probab=99.92 E-value=6.1e-24 Score=179.16 Aligned_cols=159 Identities=16% Similarity=0.205 Sum_probs=130.9
Q ss_pred CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAS 128 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~ 128 (267)
..+++.||||+++|++||+..+..++..++.+++++||+++++++|+.++++++||+++++|++++...|.++.......
T Consensus 27 ~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~ 106 (463)
T PLN02774 27 YSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD 106 (463)
T ss_pred cCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence 34456789999999999988876667789999999999999999999999999999999999987766664433222222
Q ss_pred ccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHH-HHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Q 039415 129 TLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDA-FYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSML 207 (267)
Q Consensus 129 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~ 207 (267)
+.+ +.+++..+ |+.|+++|++++ ++|++..++. +.+.+.+.+++++++|.. ++++|+.+.+..+++++++.++
T Consensus 107 -~lg-~~~~~~~~-g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~ 180 (463)
T PLN02774 107 -ILG-TCNIAAVH-GSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTIDIQEKTKEMALLSALKQI 180 (463)
T ss_pred -HhC-ccchhhcC-CHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCEEeeHHHHHHHHHHHHHHH
Confidence 222 24666665 999999999996 9999999986 789999999999998864 4679999999999999999999
Q ss_pred hcCccC
Q 039415 208 WGGTTQ 213 (267)
Q Consensus 208 fG~~~~ 213 (267)
||.+.+
T Consensus 181 ~g~~~~ 186 (463)
T PLN02774 181 AGTLSK 186 (463)
T ss_pred cCCCCh
Confidence 997643
No 21
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.90 E-value=1.2e-22 Score=172.39 Aligned_cols=160 Identities=11% Similarity=0.148 Sum_probs=123.0
Q ss_pred CCCCCCCCCCcccccccccC---CchHHHHHHHHHHhCCeEE---EEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 039415 52 SQLPPGPRGLPLVVYLPFLG---RNLHRIVMDLAIVYGPIYK---LWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI 125 (267)
Q Consensus 52 ~~~~pgp~~~p~~G~~~~~~---~~~~~~~~~~~~~yG~i~~---~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~ 125 (267)
++..|||+++|++||+..+. ....+++.+..++||..++ .++|+.++|+++||+++++|+.++...|.++....
T Consensus 30 ~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~ 109 (500)
T PLN02169 30 PHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK 109 (500)
T ss_pred cCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence 34678999999999987762 2234445555556886655 57789999999999999999988777777764332
Q ss_pred cccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHH--HHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHH
Q 039415 126 TASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAF--YAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMIN 201 (267)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~--~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ 201 (267)
...... |+|+++++ |+.|+++||+++ |+|+...++.+ .+.+.+.++.+++.+.+. +++++|+.+.+.++++|
T Consensus 110 ~~~~~~--g~gl~~~~-g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~d 185 (500)
T PLN02169 110 KIFDVL--GEGILTVD-FELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFD 185 (500)
T ss_pred HHHHhh--cCcccccC-cHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHH
Confidence 222222 47899887 999999999996 99999887643 366777778888877643 45679999999999999
Q ss_pred HHHHHHhcCccCCC
Q 039415 202 MVSSMLWGGTTQGE 215 (267)
Q Consensus 202 ii~~~~fG~~~~~~ 215 (267)
++++++||.+.+..
T Consensus 186 vi~~~~fG~~~~~~ 199 (500)
T PLN02169 186 TSSILMTGYDPMSL 199 (500)
T ss_pred HHHhheeCCCcccc
Confidence 99999999987643
No 22
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.90 E-value=6.8e-23 Score=172.38 Aligned_cols=159 Identities=16% Similarity=0.184 Sum_probs=128.5
Q ss_pred CCCCCCCCCCCCCccccccccc-----CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFL-----GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP 123 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~ 123 (267)
+++.+.||||.++|++||++.+ ..+++.++.+++++||+||++++|+.++|+++||+++++++.+++..|..+..
T Consensus 3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~ 82 (452)
T PLN03141 3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP 82 (452)
T ss_pred CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence 4567789999999999998887 24688999999999999999999999999999999999999888777765432
Q ss_pred cccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHH-HHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHH
Q 039415 124 TITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDA-FYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINM 202 (267)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~i 202 (267)
. ....+.+ +.++++.+ |+.|+++|++++ ++|+..+++. ..+.+.+.++++++.|.. ++++|+.+.+..+++++
T Consensus 83 ~-~~~~l~g-~~~~~~~~-g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v 156 (452)
T PLN03141 83 K-SLTELMG-KSSILLIN-GSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWRD--DPPVLVQDETKKIAFEV 156 (452)
T ss_pred h-hHHHHhC-cccccccC-cHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhccC--CCCEEhHHHHHHHHHHH
Confidence 2 1222332 24677765 999999999996 9998887776 356777777777777643 56899999999999999
Q ss_pred HHHHHhcCccC
Q 039415 203 VSSMLWGGTTQ 213 (267)
Q Consensus 203 i~~~~fG~~~~ 213 (267)
+++++||.+.+
T Consensus 157 i~~~~~G~~~~ 167 (452)
T PLN03141 157 LVKALISLEPG 167 (452)
T ss_pred HHHHHcCCCch
Confidence 99999997653
No 23
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.90 E-value=1.1e-22 Score=165.00 Aligned_cols=212 Identities=18% Similarity=0.233 Sum_probs=169.8
Q ss_pred CCCCCCCCCCCCCccccccccc----CCchHHHHHHHHHHhCCeEEEE-eCCEeEEEecCHHHHHHHHHhcccccCCCC-
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFL----GRNLHRIVMDLAIVYGPIYKLW-IGSKLYIIISSPTLVKEVVRDHDRKFANRN- 122 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~----~~~~~~~~~~~~~~yG~i~~~~-~~~~~~vvi~~p~~i~~il~~~~~~~~~~~- 122 (267)
.++...+|||+++|++|.++.+ ..+.++.....+++|||||+.. +|+...|.+.||++++.++++++ .++-|+
T Consensus 46 ~r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~ 124 (519)
T KOG0159|consen 46 ARPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPL 124 (519)
T ss_pred cCChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCccc
Confidence 3445568999999999998844 4567888899999999999999 88889999999999999998776 456664
Q ss_pred Cc---ccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-C----CCceeHHHH
Q 039415 123 PT---ITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-D----SKAIDIGDI 194 (267)
Q Consensus 123 ~~---~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~----~~~~d~~~~ 194 (267)
.. ...+....+..|++..+ |+.|.+.|..+++..+.+++++.|.+.+++.+++++..+... + ..+.|+.+.
T Consensus 125 ~~~~w~~~rd~~~~~~Gl~~~~-G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~ 203 (519)
T KOG0159|consen 125 LIEPWVAYRDFRGGVCGLFLLE-GPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQE 203 (519)
T ss_pred ccchhhhhHHhhccCCCcccCC-CHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHH
Confidence 21 12233444457888887 999999999999777999999999999999999999999766 2 246799999
Q ss_pred HHHHHHHHHHHHHhcCccCCCC--CchHHHHHHHHHHHHHHhhcCCcccchhccccccCccchHHHHHHHhh
Q 039415 195 AYVTMINMVSSMLWGGTTQGEK--GTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQGVERDSKNVLQ 264 (267)
Q Consensus 195 ~~~~~~~ii~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~ 264 (267)
+.+++++.||.++||..++... .+++...+.+++..++...... ....++++++|.+.|++..+.+..
T Consensus 204 l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l--~~~p~l~r~~~t~~wk~~~~~~D~ 273 (519)
T KOG0159|consen 204 LYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL--MLMPSLWRYFPTKVWKDFVRAWDQ 273 (519)
T ss_pred HHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH--HhcchHHHhCCChHHHHHHHHHHH
Confidence 9999999999999999998876 3567788999999988775522 222356777887788877766654
No 24
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.90 E-value=3.2e-22 Score=170.28 Aligned_cols=159 Identities=18% Similarity=0.342 Sum_probs=129.0
Q ss_pred CCCCCCCCCCCCCCccccccccc-----CCchHHHHHHHHHHhCC--eEEEEeCCEeEEEecCHHHHHHHHHhcccccCC
Q 039415 48 GKGNSQLPPGPRGLPLVVYLPFL-----GRNLHRIVMDLAIVYGP--IYKLWIGSKLYIIISSPTLVKEVVRDHDRKFAN 120 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~--i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~ 120 (267)
...+.+.||||+++|++|++..+ ..+++.++.+++++||+ ++++++++.++|+++||+++++|+.++ +.|.+
T Consensus 37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~ 115 (490)
T PLN02302 37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEP 115 (490)
T ss_pred ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccccc
Confidence 34455789999999999998876 34688899999999997 799999999999999999999999765 45655
Q ss_pred CCCcccccccccCCcceEeccCCcchHHHHHHHHHhhcC-hhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHH
Q 039415 121 RNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLS-KANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTM 199 (267)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~-~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~ 199 (267)
+....... .. +..++...+ |+.|+++|++++ +.|+ +++++.+.+.+.+.++++++.|.. ++.+|+.+.+..++
T Consensus 116 ~~~~~~~~-~~-g~~~~~~~~-g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~ 189 (490)
T PLN02302 116 GWPESTVE-LI-GRKSFVGIT-GEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLT 189 (490)
T ss_pred CCchhHHH-Hh-ccccccccC-cHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHH
Confidence 43222222 22 123344455 999999999997 9885 788999999999999999999965 45699999999999
Q ss_pred HHHHHHHHhcCccC
Q 039415 200 INMVSSMLWGGTTQ 213 (267)
Q Consensus 200 ~~ii~~~~fG~~~~ 213 (267)
++++++++||.+.+
T Consensus 190 ~~vi~~~~~G~~~~ 203 (490)
T PLN02302 190 FKIIMYIFLSSESE 203 (490)
T ss_pred HHHHHHHHcCCCCh
Confidence 99999999998754
No 25
>PLN02738 carotene beta-ring hydroxylase
Probab=99.89 E-value=5.7e-22 Score=171.42 Aligned_cols=148 Identities=15% Similarity=0.347 Sum_probs=123.5
Q ss_pred ccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccC
Q 039415 64 VVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASY 142 (267)
Q Consensus 64 ~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
.||+..+ ++..+..+.+++++||||+++++|+.++++++||+.+++|+.++...|.+++......... +.++++.+
T Consensus 142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~--g~~l~~~d- 218 (633)
T PLN02738 142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM--GKGLIPAD- 218 (633)
T ss_pred cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc--CCceecCC-
Confidence 4454455 5567788999999999999999999999999999999999987766677654322222222 35777776
Q ss_pred CcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHHHHHhcCccCCC
Q 039415 143 GSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMVSSMLWGGTTQGE 215 (267)
Q Consensus 143 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii~~~~fG~~~~~~ 215 (267)
|+.|+++|+.++ ++|+.++++.+.+.+.+.++.++++|... +++++|+.+.+.++++|||+.++||.+++..
T Consensus 219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~ 292 (633)
T PLN02738 219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSL 292 (633)
T ss_pred cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 999999999997 99999999999999999999999999754 4678999999999999999999999998754
No 26
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.89 E-value=4.5e-22 Score=167.64 Aligned_cols=158 Identities=14% Similarity=0.151 Sum_probs=121.3
Q ss_pred CCCCCCCCCCCCCCcccccccccC-----CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCC
Q 039415 48 GKGNSQLPPGPRGLPLVVYLPFLG-----RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRN 122 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~ 122 (267)
...+.+.||||.++|++||+..+. .++..++.+++++||+++++++++.++|+++||+++++++.++...|.++.
T Consensus 25 ~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~ 104 (472)
T PLN02987 25 RYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSY 104 (472)
T ss_pred ccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecC
Confidence 355667899999999999998762 468889999999999999999999999999999999999988877776654
Q ss_pred CcccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHH-HHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHH
Q 039415 123 PTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYA-FRRDEMRKIIREIYNKDSKAIDIGDIAYVTMIN 201 (267)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ 201 (267)
.......+ + ++++++.+ |+.|+++|+++. +.++.+.++.+.. .+.+.++..++.|. +++|+.+.+.+++++
T Consensus 105 ~~~~~~~l-g-~~~l~~~~-g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~t~~ 176 (472)
T PLN02987 105 PGSISNLL-G-KHSLLLMK-GNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLDSWS----SRVLLMEEAKKITFE 176 (472)
T ss_pred cHHHHHHh-C-cccccccC-cHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHhhc----cceehHHHHHHHHHH
Confidence 32222222 2 35788886 999999999985 6545555555432 23444444555552 469999999999999
Q ss_pred HHHHHHhcCccC
Q 039415 202 MVSSMLWGGTTQ 213 (267)
Q Consensus 202 ii~~~~fG~~~~ 213 (267)
++++++||.+.+
T Consensus 177 vi~~~~fg~~~~ 188 (472)
T PLN02987 177 LTVKQLMSFDPG 188 (472)
T ss_pred HHHHHHcCCCCh
Confidence 999999998754
No 27
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.89 E-value=6.1e-22 Score=169.31 Aligned_cols=157 Identities=15% Similarity=0.186 Sum_probs=122.6
Q ss_pred CCCCCCCCcccccccccCCchHHHHHHHHHHh---CCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc-cccc
Q 039415 54 LPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVY---GPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI-TAST 129 (267)
Q Consensus 54 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~y---G~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~-~~~~ 129 (267)
.+|||+++|++||++.+..+ +..+.++.++| |+++++++|+.+.|+++||+++++|+.++...|.++.... ....
T Consensus 31 ~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~ 109 (516)
T PLN03195 31 NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV 109 (516)
T ss_pred ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence 47899999999998765222 33456777777 8999999999999999999999999987655666553321 1112
Q ss_pred cccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHHHH
Q 039415 130 LTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFR-RDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMVSSM 206 (267)
Q Consensus 130 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~-~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii~~~ 206 (267)
.. +.+++..+ |+.|+++||+++ ++|+.++++.+.+.+ .+.++.+++.+... +++++|+.+++..+++|+++.+
T Consensus 110 ~~--g~~l~~~~-g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~ 185 (516)
T PLN03195 110 LL--GDGIFNVD-GELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV 185 (516)
T ss_pred Hh--cCeeeccC-cHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence 22 35777665 999999999996 999999999999876 55566677666532 4567999999999999999999
Q ss_pred HhcCccCCC
Q 039415 207 LWGGTTQGE 215 (267)
Q Consensus 207 ~fG~~~~~~ 215 (267)
+||.+++..
T Consensus 186 ~fG~~~~~~ 194 (516)
T PLN03195 186 GFGVEIGTL 194 (516)
T ss_pred HhCCCcccc
Confidence 999988754
No 28
>PLN02936 epsilon-ring hydroxylase
Probab=99.88 E-value=1.3e-21 Score=165.93 Aligned_cols=157 Identities=17% Similarity=0.274 Sum_probs=132.3
Q ss_pred CCCCCCCccccccccc-----CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccc
Q 039415 55 PPGPRGLPLVVYLPFL-----GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAST 129 (267)
Q Consensus 55 ~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~ 129 (267)
-.|-.|+|++|+.+.+ ++.++..+.+++++|||++++++|+.++|+++||+++++|+.+.+..|.+++.......
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~ 93 (489)
T PLN02936 14 WGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEF 93 (489)
T ss_pred CCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHH
Confidence 3578899999997776 57788999999999999999999999999999999999999876677877653322222
Q ss_pred cccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHH-HHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHHHH
Q 039415 130 LTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYA-FRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMVSSM 206 (267)
Q Consensus 130 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii~~~ 206 (267)
.. +.++++.+ |+.|+++||+++ +.|+.++++.+.+ .+.++++.+++.|... +++++|+.++++.+++|+++.+
T Consensus 94 ~~--~~~i~~~~-g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~ 169 (489)
T PLN02936 94 LF--GSGFAIAE-GELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLS 169 (489)
T ss_pred Hh--cCccccCC-chHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHH
Confidence 22 36777776 999999999997 9999988988765 7888899999998754 4578999999999999999999
Q ss_pred HhcCccCCC
Q 039415 207 LWGGTTQGE 215 (267)
Q Consensus 207 ~fG~~~~~~ 215 (267)
+||.+++..
T Consensus 170 ~fG~~~~~~ 178 (489)
T PLN02936 170 VFNYNFDSL 178 (489)
T ss_pred HcCCCcccc
Confidence 999998865
No 29
>PLN02648 allene oxide synthase
Probab=99.85 E-value=3.5e-21 Score=161.57 Aligned_cols=160 Identities=13% Similarity=0.117 Sum_probs=127.9
Q ss_pred CCCCCCCCCCCCCccccccccc-----CCchHHHHHHHHHHhCC-eEEEEeCCEeE-------EEecCHHHHHHHHHh--
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFL-----GRNLHRIVMDLAIVYGP-IYKLWIGSKLY-------IIISSPTLVKEVVRD-- 113 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------vvi~~p~~i~~il~~-- 113 (267)
..+.+.|||+.|+|++|+..++ ..++..++.+.+++||+ ||+++++|.|+ |+++||++++.+|.+
T Consensus 13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~ 92 (480)
T PLN02648 13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSK 92 (480)
T ss_pred CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchh
Confidence 3456779999999999999864 45668999999999998 99999998666 999999999999974
Q ss_pred --cccccCCCCCcccccccccCCc---ceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CC
Q 039415 114 --HDRKFANRNPTITASTLTYRAS---DTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DS 186 (267)
Q Consensus 114 --~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~ 186 (267)
+...+..... .... +.+ +. ++...+ |+.|+++|+++. ++|+ ..++.+.+.|.+.++++++.|... .+
T Consensus 93 ~~~~~~~~~~~~-~~~~-l~G-~~~~~s~~~~~-g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~ 166 (480)
T PLN02648 93 VDKRDVFTGTYM-PSTA-FTG-GYRVLSYLDPS-EPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKK 166 (480)
T ss_pred ccccccceeeec-cCcc-ccC-CceeeeecCCC-CchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhC
Confidence 4333443222 2223 332 23 444444 999999999996 9999 577999999999999999999642 34
Q ss_pred CceeHHHHHHHHHHHHHHHHHhcCccCC
Q 039415 187 KAIDIGDIAYVTMINMVSSMLWGGTTQG 214 (267)
Q Consensus 187 ~~~d~~~~~~~~~~~ii~~~~fG~~~~~ 214 (267)
+++|+.+.++++++|++++++||.+.+.
T Consensus 167 ~~vdv~~~~~~lt~~vi~~~lfG~~~~~ 194 (480)
T PLN02648 167 GKAEFNDPLDQMAFNFLCKALTGKDPSE 194 (480)
T ss_pred CCccccchHHHHHHHHHHHHHcCCCcch
Confidence 5799999999999999999999987654
No 30
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.78 E-value=3.3e-17 Score=139.29 Aligned_cols=165 Identities=12% Similarity=0.126 Sum_probs=121.6
Q ss_pred CcccccccccCCchHHHHHHHHHHhC-CeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc-cccccccCCcceE
Q 039415 61 LPLVVYLPFLGRNLHRIVMDLAIVYG-PIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI-TASTLTYRASDTV 138 (267)
Q Consensus 61 ~p~~G~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 138 (267)
.++.|+......+..+++.++.++++ .+++++.++. ++++||+.+++|+.++...|.++.... ...... |+|++
T Consensus 49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~--g~gi~ 124 (502)
T PLN02426 49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL--GRGIF 124 (502)
T ss_pred CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc--CCcee
Confidence 45788876654556777777888887 5777776554 899999999999987766787654322 122222 46888
Q ss_pred eccCCcchHHHHHHHHHhhcChhhHHHHH--HHHHHHHHHHHHHHHhc----CCCceeHHHHHHHHHHHHHHHHHhcCcc
Q 039415 139 FASYGSKWQILRKLFVHEVLSKANLDAFY--AFRRDEMRKIIREIYNK----DSKAIDIGDIAYVTMINMVSSMLWGGTT 212 (267)
Q Consensus 139 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~--~~~~~~~~~~~~~l~~~----~~~~~d~~~~~~~~~~~ii~~~~fG~~~ 212 (267)
+++ |+.|+++||+++ ++|+.++++.+. +.+.+.++.+++.+.+. ++.++|+.+++.++++|+++.++||.++
T Consensus 125 ~~~-g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~ 202 (502)
T PLN02426 125 NVD-GDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP 202 (502)
T ss_pred ecC-cHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence 877 999999999996 999999998874 56677777788777543 2357999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHHHHH
Q 039415 213 QGEKGTSLAAEFRVEVSQA 231 (267)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~ 231 (267)
+..+.+....++.++++..
T Consensus 203 ~~l~~~~~~~~~~~~~~~~ 221 (502)
T PLN02426 203 GCLELSLPISEFADAFDTA 221 (502)
T ss_pred cccCCCCCccHHHHHHHHH
Confidence 7653111223455555443
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.74 E-value=1.1e-16 Score=127.62 Aligned_cols=157 Identities=13% Similarity=0.143 Sum_probs=116.5
Q ss_pred CCCCCCC-CCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCc-cccccc
Q 039415 53 QLPPGPR-GLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPT-ITASTL 130 (267)
Q Consensus 53 ~~~pgp~-~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~-~~~~~~ 130 (267)
+.||--. ++|++|++..++.+|.++++++++|||+||++.++|+.+-++.||+....++..+.....-.... ......
T Consensus 31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v 110 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV 110 (486)
T ss_pred CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence 5777655 47999999999999999999999999999999999999999999999999997653333221111 122222
Q ss_pred ccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHH-HHhcCCCceeHHHHHHHHHHHHHHHHH-h
Q 039415 131 TYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIRE-IYNKDSKAIDIGDIAYVTMINMVSSML-W 208 (267)
Q Consensus 131 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~d~~~~~~~~~~~ii~~~~-f 208 (267)
+ |+|+.....+....++.+.+. ..+...+++++.+.|.++.++.+.. |.+ +...|....+...++-.++.++ |
T Consensus 111 F--g~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~--s~~~d~l~~~~~~ii~tAs~~ll~ 185 (486)
T KOG0684|consen 111 F--GKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE--SGETDGLYTFCRLIIFTASRLLLG 185 (486)
T ss_pred c--CCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc--ccchhHhhhhhHHHhhhhHHHhhh
Confidence 3 467776655788889999994 9999999999999999999999888 554 3345554444444444445554 5
Q ss_pred cCccCC
Q 039415 209 GGTTQG 214 (267)
Q Consensus 209 G~~~~~ 214 (267)
|.....
T Consensus 186 ~e~r~~ 191 (486)
T KOG0684|consen 186 GEVRDQ 191 (486)
T ss_pred hhhhhh
Confidence 544443
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.25 E-value=8.6e-11 Score=97.73 Aligned_cols=134 Identities=17% Similarity=0.234 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHhCCeEEEEeCCEe--EEEecCHHHHHHHHHhcccccCCCCCccc----ccccccCCcc-eEeccCCcch
Q 039415 74 LHRIVMDLAIVYGPIYKLWIGSKL--YIIISSPTLVKEVVRDHDRKFANRNPTIT----ASTLTYRASD-TVFASYGSKW 146 (267)
Q Consensus 74 ~~~~~~~~~~~yG~i~~~~~~~~~--~vvi~~p~~i~~il~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~g~~w 146 (267)
+......+.+.||.++.++..+.. .+++++++.++++++++. .+++...... ..... +.+ +++.+ |+.|
T Consensus 24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~ll~~d-g~~H 99 (411)
T COG2124 24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVL--GDGSLLTLD-GPEH 99 (411)
T ss_pred hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhc--cccceeecC-CHHH
Confidence 345556677888888887765544 899999999999997663 2222221111 11222 234 66666 9999
Q ss_pred HHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhcCccCCC
Q 039415 147 QILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGE 215 (267)
Q Consensus 147 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG~~~~~~ 215 (267)
+++||+++ ++|+++.++.+.+.+.+.++++++.+ . .++..++.+.+..+++++|| .+||.+.++.
T Consensus 100 ~r~Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~ 164 (411)
T COG2124 100 TRLRKLLA-PAFTPRALRGYRPLIREIADRLLDDL-W-QGGADLVLDFAAELTLRVIA-ELLGVPLEDR 164 (411)
T ss_pred HHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c-cCCchhHHHHhhhhhHHHHH-HHhCCCHHHH
Confidence 99999997 99999999999999999999999999 4 23677889999999999999 9999887643
No 33
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=81.43 E-value=11 Score=24.74 Aligned_cols=61 Identities=25% Similarity=0.399 Sum_probs=42.1
Q ss_pred CCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCC------EeEEEecCHHHHHHHHHh
Q 039415 51 NSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGS------KLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 51 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~------~~~vvi~~p~~i~~il~~ 113 (267)
..+.||.-..+-++.|++. +-..+.+.+++.+||+|.++++|. .-+||-.|-..++..+..
T Consensus 10 ~~rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 10 NIRLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred CCCCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 3344554444555555543 234677889999999999999864 568888888888887753
No 34
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=54.79 E-value=40 Score=23.10 Aligned_cols=40 Identities=23% Similarity=0.371 Sum_probs=30.3
Q ss_pred chHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhc
Q 039415 73 NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDH 114 (267)
Q Consensus 73 ~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~ 114 (267)
+....+.+|.++||.+--. .+...+...|++.++++...+
T Consensus 75 ~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~ 114 (129)
T PF13625_consen 75 NVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP 114 (129)
T ss_pred HHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence 3466889999999976432 246778889999999998643
No 35
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=50.22 E-value=1.1e+02 Score=26.45 Aligned_cols=38 Identities=13% Similarity=0.244 Sum_probs=20.8
Q ss_pred HHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCC
Q 039415 83 IVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFAN 120 (267)
Q Consensus 83 ~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~ 120 (267)
.+||.|++-.+-++.+-|=.=|..-++=+.++.+.|+.
T Consensus 221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~l 258 (534)
T KOG3653|consen 221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSL 258 (534)
T ss_pred CccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhc
Confidence 57888887766555544433344444444444445544
No 36
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=47.43 E-value=20 Score=28.76 Aligned_cols=18 Identities=6% Similarity=0.091 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 039415 30 LFSTVAVICFLWPFFMKV 47 (267)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~ 47 (267)
++++++.+.+|++++|+|
T Consensus 266 liIVLIMvIIYLILRYRR 283 (299)
T PF02009_consen 266 LIIVLIMVIIYLILRYRR 283 (299)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333344455555555554
No 37
>PTZ00370 STEVOR; Provisional
Probab=47.26 E-value=21 Score=28.20 Aligned_cols=6 Identities=17% Similarity=0.174 Sum_probs=2.3
Q ss_pred hhcCCC
Q 039415 45 MKVGKG 50 (267)
Q Consensus 45 ~~~~~~ 50 (267)
++|++.
T Consensus 279 yrrRK~ 284 (296)
T PTZ00370 279 YRRRKN 284 (296)
T ss_pred HHhhcc
Confidence 344333
No 38
>PRK02302 hypothetical protein; Provisional
Probab=35.98 E-value=1.2e+02 Score=19.44 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=24.4
Q ss_pred HHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHh
Q 039415 79 MDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 79 ~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~ 113 (267)
.++ ++||+|..+.--..-.+.-+|.+.+.++..+
T Consensus 21 r~L-rkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k 54 (89)
T PRK02302 21 RKL-SKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE 54 (89)
T ss_pred HHH-hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 344 7799998875444556777788888888754
No 39
>PTZ00046 rifin; Provisional
Probab=35.11 E-value=48 Score=27.31 Aligned_cols=18 Identities=0% Similarity=-0.020 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHhhcC
Q 039415 31 FSTVAVICFLWPFFMKVG 48 (267)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~ 48 (267)
+++++.+.+|+.++|||.
T Consensus 326 VIVLIMvIIYLILRYRRK 343 (358)
T PTZ00046 326 VIVLIMVIIYLILRYRRK 343 (358)
T ss_pred HHHHHHHHHHHHHHhhhc
Confidence 333444555555555443
No 40
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=34.92 E-value=49 Score=27.21 Aligned_cols=18 Identities=0% Similarity=-0.003 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHhhcC
Q 039415 31 FSTVAVICFLWPFFMKVG 48 (267)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~ 48 (267)
+++++.+.+|+.++|+|.
T Consensus 321 vIVLIMvIIYLILRYRRK 338 (353)
T TIGR01477 321 IIVLIMVIIYLILRYRRK 338 (353)
T ss_pred HHHHHHHHHHHHHHhhhc
Confidence 333344555555555443
No 41
>PRK02886 hypothetical protein; Provisional
Probab=31.87 E-value=1.4e+02 Score=19.02 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=24.3
Q ss_pred HHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHh
Q 039415 79 MDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 79 ~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~ 113 (267)
.++ ++||+|..+.--..-.+.-+|.+.+.++...
T Consensus 19 r~L-rkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k 52 (87)
T PRK02886 19 KQL-RKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK 52 (87)
T ss_pred HHH-hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 344 6799998875444556777788888888753
No 42
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=31.46 E-value=56 Score=23.58 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=30.8
Q ss_pred CCchHHHHHHHHHHhC-CeEEEEeCCE-e---EEEecCHHHHHHH
Q 039415 71 GRNLHRIVMDLAIVYG-PIYKLWIGSK-L---YIIISSPTLVKEV 110 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG-~i~~~~~~~~-~---~vvi~~p~~i~~i 110 (267)
+....+..+++++++| |+..+.++|. | -+|++||-.+--+
T Consensus 153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAGvl 197 (218)
T COG1707 153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAGVL 197 (218)
T ss_pred cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhhhh
Confidence 5677889999999999 9999988663 2 4588888765443
No 43
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=29.85 E-value=1.1e+02 Score=16.98 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=25.1
Q ss_pred HHHHHHhCCeEEEEeC----CEeEEEecCHHHHHHHHH
Q 039415 79 MDLAIVYGPIYKLWIG----SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 79 ~~~~~~yG~i~~~~~~----~~~~vvi~~p~~i~~il~ 112 (267)
.+...+||+|-.+.+. +.-.|-..+++.++....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4677899999888753 445677779999888875
No 44
>PRK12333 nucleoside triphosphate pyrophosphohydrolase; Reviewed
Probab=29.08 E-value=2.6e+02 Score=21.20 Aligned_cols=44 Identities=2% Similarity=0.090 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhcCc
Q 039415 166 FYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGT 211 (267)
Q Consensus 166 ~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG~~ 211 (267)
+.+.+.+++-++++.+.. +..-++.+++..+.+.|+...-.+.+
T Consensus 28 L~~yllEE~yEv~dAI~~--~d~~~l~EELGDlLlqVvfha~iaee 71 (204)
T PRK12333 28 LRPYLLEEAAEAVDALSE--GDPQELAEELGDVLLQVAFHSVIAEE 71 (204)
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555555555555554 33444555555555444444444433
No 45
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=28.72 E-value=1.4e+02 Score=19.91 Aligned_cols=10 Identities=20% Similarity=0.009 Sum_probs=6.6
Q ss_pred Cccccccccc
Q 039415 61 LPLVVYLPFL 70 (267)
Q Consensus 61 ~p~~G~~~~~ 70 (267)
-|+-||+...
T Consensus 46 ~p~YgNL~~~ 55 (107)
T PF15330_consen 46 DPCYGNLELQ 55 (107)
T ss_pred Cccccccccc
Confidence 5777776554
No 46
>PF05084 GRA6: Granule antigen protein (GRA6); InterPro: IPR008119 Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage []. The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=28.67 E-value=93 Score=22.25 Aligned_cols=9 Identities=33% Similarity=0.792 Sum_probs=4.6
Q ss_pred CCCCCCCCC
Q 039415 51 NSQLPPGPR 59 (267)
Q Consensus 51 ~~~~~pgp~ 59 (267)
.++.||.|.
T Consensus 175 ~rrsppeps 183 (215)
T PF05084_consen 175 GRRSPPEPS 183 (215)
T ss_pred ccCCCCCCC
Confidence 344556554
No 47
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=27.86 E-value=57 Score=18.47 Aligned_cols=18 Identities=17% Similarity=0.252 Sum_probs=15.0
Q ss_pred hCCeEEEEeCCEeEEEec
Q 039415 85 YGPIYKLWIGSKLYIIIS 102 (267)
Q Consensus 85 yG~i~~~~~~~~~~vvi~ 102 (267)
-|++++++-||+.+.|..
T Consensus 3 ~GDvV~LKSGGp~MTV~~ 20 (53)
T PF09926_consen 3 IGDVVQLKSGGPRMTVTE 20 (53)
T ss_pred CCCEEEEccCCCCeEEEE
Confidence 489999999998888763
No 48
>PRK15117 ABC transporter periplasmic binding protein MlaC; Provisional
Probab=24.55 E-value=3.2e+02 Score=20.75 Aligned_cols=64 Identities=8% Similarity=0.135 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhc----CCCceeHHHHHHH-----HHHHHHHHHHhcCccCCCCCchHHHHHHHHHHHHH
Q 039415 168 AFRRDEMRKIIREIYNK----DSKAIDIGDIAYV-----TMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQAL 232 (267)
Q Consensus 168 ~~~~~~~~~~~~~l~~~----~~~~~d~~~~~~~-----~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
..+.+.++++++.+... .+.+--+...+.. +-++.+++.++|....... ++...+|.+.+.+.+
T Consensus 29 ~~V~~~~~~vl~~l~~~~~~~~~~~~~~~~~v~~~l~p~~Df~~~s~~vLG~~wr~as-~eQr~~F~~~F~~~L 101 (211)
T PRK15117 29 KLMDEAAQKTFDRLKNEQPKIRANPDYLRTIVDQELLPYVQVKYAGALVLGRYYKDAT-PAQREAYFAAFREYL 101 (211)
T ss_pred HHHHHHHHHHHHHHHhCHHhhccCHHHHHHHHHHHccccCCHHHHHHHHhhhhhhhCC-HHHHHHHHHHHHHHH
Confidence 35667777777777652 1222222222222 2478889999999877653 455566666666554
No 49
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=23.25 E-value=2.7e+02 Score=19.52 Aligned_cols=49 Identities=6% Similarity=0.039 Sum_probs=34.7
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
+++++..- -..+.+.++.++||+|..+.+. +.-+|-..+++.++.++..
T Consensus 38 fVgnL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 38 FIGGLSWG--TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 (144)
T ss_pred EEeCCCCC--CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 34444432 2356788888999998887652 3467888899999999864
No 50
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=23.08 E-value=2e+02 Score=18.01 Aligned_cols=38 Identities=3% Similarity=0.083 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhCCe---EEEEeCCEeEEEecC-----HHHHHHHHH
Q 039415 75 HRIVMDLAIVYGPI---YKLWIGSKLYIIISS-----PTLVKEVVR 112 (267)
Q Consensus 75 ~~~~~~~~~~yG~i---~~~~~~~~~~vvi~~-----p~~i~~il~ 112 (267)
.+...+++..|.++ +++..++.+-+-|.+ -+.+.++++
T Consensus 23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq 68 (81)
T PRK10597 23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ 68 (81)
T ss_pred HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence 44557788889877 899888888787743 366666664
No 51
>KOG4241 consensus Mitochondrial ribosomal protein L10 [Translation, ribosomal structure and biogenesis]
Probab=23.02 E-value=79 Score=23.77 Aligned_cols=28 Identities=14% Similarity=0.394 Sum_probs=23.2
Q ss_pred CCeEEEEeCCEeEEEecCHHHHHHHHHh
Q 039415 86 GPIYKLWIGSKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 86 G~i~~~~~~~~~~vvi~~p~~i~~il~~ 113 (267)
..+..++.|...++...|++.++++++-
T Consensus 137 ~~l~plfvgnh~ill~~d~~kik~~lri 164 (245)
T KOG4241|consen 137 SSLNPLFVGNHAILLAKDISKIKSILRI 164 (245)
T ss_pred hhhhhheeccceEEEcCChHHHHHHHHH
Confidence 3466677888999999999999999964
No 52
>PF04530 Viral_Beta_CD: Viral Beta C/D like family; InterPro: IPR007617 This is a family of ssRNA positive-strand viral proteins. Conserved region is found in the Beta C and Beta D transcripts.
Probab=22.72 E-value=2.6e+02 Score=19.09 Aligned_cols=20 Identities=5% Similarity=0.154 Sum_probs=13.4
Q ss_pred eEEEEeCCEeEEEecCHHHHHHHH
Q 039415 88 IYKLWIGSKLYIIISSPTLVKEVV 111 (267)
Q Consensus 88 i~~~~~~~~~~vvi~~p~~i~~il 111 (267)
-+.++++..| .||+.|+.|-
T Consensus 90 sVeik~~~~P----IDP~VIaAIH 109 (122)
T PF04530_consen 90 SVEIKLAPVP----IDPEVIAAIH 109 (122)
T ss_pred ceEEecCCCC----CCHHHHHHHH
Confidence 3455555433 4999999985
Done!