Query 039415
Match_columns 267
No_of_seqs 182 out of 1840
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 16:04:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 1.5E-29 5.3E-34 214.2 19.1 201 49-252 4-208 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 8.7E-29 3E-33 210.2 15.9 200 48-251 4-211 (507)
3 2hi4_A Cytochrome P450 1A2; CY 100.0 2.8E-27 9.5E-32 200.4 18.7 201 48-252 11-223 (495)
4 3e6i_A CYPIIE1, P450-J, cytoch 100.0 4.3E-27 1.5E-31 198.3 18.2 198 48-251 5-208 (476)
5 3qz1_A Steroid 21-hydroxylase; 99.9 2.5E-28 8.5E-33 206.9 9.1 195 46-252 22-219 (496)
6 3czh_A Cytochrome P450 2R1; vi 99.9 7.1E-27 2.4E-31 197.3 16.8 198 50-251 9-213 (481)
7 3tbg_A Cytochrome P450 2D6; mo 99.9 2.1E-26 7.3E-31 194.2 19.7 184 47-233 4-192 (479)
8 1po5_A Cytochrome P450 2B4; ox 99.9 1.6E-26 5.3E-31 194.9 18.4 177 50-231 7-186 (476)
9 2fdv_A Cytochrome P450 2A6; CY 99.9 1.6E-26 5.3E-31 194.9 18.2 196 51-251 8-209 (476)
10 3k9v_A 1,25-dihydroxyvitamin D 99.9 7.3E-27 2.5E-31 197.2 14.7 188 45-235 16-217 (482)
11 3s79_A Cytochrome P450 19A1; o 99.9 8.3E-27 2.8E-31 197.9 14.8 162 49-213 41-209 (503)
12 3nxu_A Cytochrome P450 3A4; al 99.9 6.2E-27 2.1E-31 197.8 13.5 161 50-215 11-174 (485)
13 1r9o_A Cytochrome P450 2C9; mo 99.9 3.2E-26 1.1E-30 193.1 16.8 197 50-251 8-210 (477)
14 3gw9_A Sterol 14alpha-demethyl 99.9 2E-26 6.7E-31 192.9 11.6 193 52-253 2-197 (450)
15 3ld6_A Lanosterol 14-alpha dem 99.9 4.7E-26 1.6E-30 191.3 8.4 159 52-215 10-170 (461)
16 3n9y_A Cholesterol SIDE-chain 99.9 2.1E-24 7.2E-29 182.4 16.8 185 47-235 3-204 (487)
17 2ij2_A Cytochrome P450 BM3; mo 99.9 5.5E-24 1.9E-28 179.1 16.5 159 53-215 3-165 (470)
18 2ve3_A Putative cytochrome P45 99.9 2.1E-24 7.1E-29 180.4 11.7 157 46-209 5-161 (444)
19 3i3k_A Lanosterol 14-alpha dem 99.9 1E-24 3.5E-29 183.2 8.9 162 48-214 6-169 (461)
20 3dbg_A Putative cytochrome P45 99.9 4E-24 1.4E-28 179.8 10.1 170 52-233 22-192 (467)
21 2cib_A Cytochrome P450 51; hem 99.9 2.4E-23 8.3E-28 174.5 13.5 156 53-215 4-160 (455)
22 3v8d_A Cholesterol 7-alpha-mon 99.9 6.3E-23 2.2E-27 173.6 11.8 179 47-231 7-192 (491)
23 2cd8_A Cytochrome P450 monooxy 99.9 4E-22 1.4E-26 166.0 12.6 158 49-213 22-186 (436)
24 1n97_A CYP175A1; electron tran 99.9 3.9E-22 1.3E-26 163.8 7.8 147 57-213 3-150 (389)
25 3mdm_A Cholesterol 24-hydroxyl 99.8 3.4E-20 1.2E-24 155.4 15.9 142 71-215 9-156 (456)
26 3dax_A Cytochrome P450 7A1; ch 99.8 1.9E-20 6.6E-25 158.3 12.5 164 47-215 7-178 (491)
27 1izo_A P450bsbeta, cytochrome 99.8 1.2E-19 4.2E-24 150.3 14.3 146 61-214 8-156 (417)
28 3awm_A Fatty acid alpha-hydrox 99.8 1.4E-19 4.8E-24 149.9 14.1 149 55-214 4-155 (415)
29 3b6h_A Prostacyclin synthase; 99.8 1.6E-19 5.4E-24 153.0 13.5 162 47-215 12-178 (498)
30 1jfb_A Nitric-oxide reductase 99.8 2.5E-19 8.4E-24 147.9 13.4 154 54-213 2-163 (404)
31 1ued_A P450 OXYC, P450 monooxy 99.8 4.3E-19 1.5E-23 146.5 12.2 149 51-212 8-169 (406)
32 3dsk_A Cytochrome P450 74A, ch 99.8 3.1E-19 1.1E-23 151.1 10.7 164 48-215 23-206 (495)
33 2zbx_A Cytochrome P450-SU1; be 99.8 2E-18 7E-23 142.7 14.7 154 53-213 5-168 (412)
34 1s1f_A Putative cytochrome P45 99.8 6.6E-18 2.3E-22 139.4 15.2 151 53-213 8-166 (406)
35 3b98_A Prostaglandin I2 syntha 99.8 1.6E-18 5.5E-23 145.9 10.4 157 47-211 12-174 (475)
36 2zwu_A Camphor 5-monooxygenase 99.8 6E-18 2E-22 140.0 13.3 156 48-213 6-173 (415)
37 1cpt_A Cytochrome P450-TERP; o 99.8 2.5E-18 8.5E-23 142.9 11.1 153 50-213 3-175 (428)
38 3dan_A Cytochrome P450 74A2; A 99.7 1.5E-17 5.1E-22 139.9 12.4 163 49-215 5-188 (473)
39 3ivy_A Cytochrome P450 CYP125; 99.7 1.7E-17 5.8E-22 138.0 12.4 153 52-211 17-186 (433)
40 3oo3_A OXY protein; cytochrome 99.7 2.8E-17 9.5E-22 134.7 13.5 139 70-213 10-152 (384)
41 3abb_A CYP105D6, cytochrome P4 99.7 3.5E-17 1.2E-21 135.2 13.6 139 68-213 20-167 (408)
42 2jjn_A Cytochrome P450 113A1; 99.7 2.1E-17 7.3E-22 136.6 10.6 150 43-215 9-159 (411)
43 3aba_A Cytochrome P450; oxidor 99.7 1.1E-16 3.8E-21 131.9 14.3 137 69-213 16-160 (403)
44 3a4g_A Vitamin D hydroxylase; 99.7 1.5E-16 5.1E-21 131.4 13.9 136 70-213 18-159 (411)
45 3tyw_A Putative cytochrome P45 99.7 2.6E-16 8.9E-21 130.3 15.0 140 69-215 26-174 (417)
46 1odo_A Putative cytochrome P45 99.7 8.3E-17 2.9E-21 132.9 11.0 139 69-213 12-162 (408)
47 1z8o_A 6-deoxyerythronolide B 99.7 2.1E-16 7.3E-21 130.3 13.1 137 70-214 12-163 (404)
48 2wm5_A CYP124, putative cytoch 99.7 1.7E-16 5.8E-21 132.1 12.5 137 72-213 44-192 (435)
49 2xbk_A PIMD protein; epoxidati 99.7 6.3E-16 2.1E-20 127.4 15.3 136 70-213 24-170 (404)
50 3ejb_B Biotin biosynthesis cyt 99.7 2.6E-16 8.8E-21 129.8 13.0 135 70-213 11-152 (404)
51 2y5n_A MYCG, P-450-like protei 99.7 2.3E-16 7.9E-21 130.5 12.5 135 70-213 35-176 (417)
52 4fb2_A P450CIN; heme, monooxyg 99.7 9.3E-17 3.2E-21 132.2 9.4 138 69-213 16-156 (398)
53 2z36_A MOXA, cytochrome P450 t 99.7 6.7E-16 2.3E-20 127.6 13.7 152 52-213 6-169 (413)
54 3tkt_A Cytochrome P450; aromat 99.7 3.3E-16 1.1E-20 130.9 11.1 134 74-213 47-197 (450)
55 1gwi_A CYP154C1, cytochrome P4 99.7 8.2E-16 2.8E-20 127.1 12.0 138 69-213 14-165 (411)
56 2uuq_A CYP130, cytochrome P450 99.7 1E-15 3.5E-20 126.6 12.3 134 71-213 24-168 (414)
57 2xkr_A CYP142, putative cytoch 99.6 7.6E-16 2.6E-20 126.8 11.2 130 71-213 17-147 (398)
58 2dkk_A Cytochrome P450; CYP158 99.6 9.7E-16 3.3E-20 126.6 11.5 136 71-213 26-169 (411)
59 2z3t_A Cytochrome P450; monoxy 99.6 1.5E-15 5E-20 126.0 12.5 135 71-213 19-170 (425)
60 3r9b_A Cytochrome P450 164A2; 99.6 3.6E-15 1.2E-19 123.5 12.2 134 69-213 26-168 (418)
61 1q5d_A P450 epoxidase; cytochr 99.6 7E-16 2.4E-20 127.8 7.6 134 70-213 24-167 (419)
62 3mgx_A Putative P450 monooxyge 99.6 1.4E-15 4.9E-20 125.7 8.8 135 71-212 36-177 (415)
63 3lxh_A Cytochrome P450; heme, 99.6 4E-15 1.4E-19 123.3 11.5 136 71-213 37-174 (421)
64 3nc3_A Cytochrome P450 CYPX; c 99.6 2E-15 6.8E-20 125.8 8.5 133 71-213 52-185 (441)
65 3oft_A Cytochrome P450, CYP101 99.6 5.8E-15 2E-19 121.4 10.5 137 69-213 21-158 (396)
66 3buj_A CALO2; heme, iron, meta 99.6 4.5E-15 1.5E-19 122.1 8.8 131 72-213 13-151 (397)
67 1lfk_A OXYB, P450 monooxygenas 99.6 4.4E-15 1.5E-19 122.2 8.4 130 77-213 18-161 (398)
68 1n40_A P450 MT2, cytochrome P4 99.5 8.1E-15 2.8E-19 120.5 7.8 133 70-213 14-155 (396)
69 1io7_A Cytochrome P450 CYP119; 99.5 1.6E-14 5.6E-19 117.6 9.5 128 74-213 1-139 (368)
70 3rwl_A Cytochrome P450 alkane 99.5 2.1E-13 7.2E-18 113.1 13.9 136 71-213 37-183 (426)
71 2rfb_A Cytochrome P450; heme, 99.5 4.1E-14 1.4E-18 114.1 8.2 114 83-213 2-116 (343)
72 3b4x_A 367AA long hypothetical 99.5 1.3E-13 4.4E-18 112.2 10.0 122 75-211 2-134 (367)
73 2wiy_A XPLA-heme, cytochrome P 99.5 1.9E-13 6.4E-18 112.3 9.2 132 72-213 20-151 (394)
74 3p3o_A Cytochrome P450; monoox 99.3 3.4E-13 1.2E-17 111.5 3.9 132 71-213 32-171 (416)
75 4dnj_A Putative cytochrome P45 99.3 1.6E-11 5.5E-16 101.4 10.8 146 59-212 18-171 (412)
76 4dxy_A Cytochrome P450, CYP101 99.2 4.6E-10 1.6E-14 92.7 13.0 136 71-213 36-173 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 98.4 9.4E-10 3.2E-14 89.3 -10.2 132 54-213 35-180 (381)
78 2krb_A Eukaryotic translation 73.2 12 0.0004 22.0 7.5 50 63-112 5-65 (81)
79 2diu_A KIAA0430 protein; struc 73.1 6 0.0002 24.7 4.2 60 62-122 12-75 (96)
80 1s79_A Lupus LA protein; RRM, 58.6 31 0.001 21.5 6.2 49 63-113 15-71 (103)
81 2a3j_A U1 small nuclear ribonu 58.3 25 0.00084 23.1 5.3 52 62-113 32-91 (127)
82 2dgx_A KIAA0430 protein; RRM d 57.7 28 0.00095 21.2 5.3 52 62-113 12-71 (96)
83 1nu4_A U1A RNA binding domain; 55.6 24 0.00081 21.4 4.7 52 62-113 11-70 (97)
84 1iqt_A AUF1, heterogeneous nuc 50.8 30 0.001 19.6 4.4 40 75-114 13-61 (75)
85 3lqv_A PRE-mRNA branch site pr 48.8 47 0.0016 20.8 7.9 57 54-112 3-65 (115)
86 2nlw_A Eukaryotic translation 48.0 47 0.0016 20.5 7.5 53 61-113 17-80 (105)
87 3d2w_A TAR DNA-binding protein 45.4 47 0.0016 19.8 5.6 49 60-110 12-64 (89)
88 2mss_A Protein (musashi1); RNA 40.1 50 0.0017 18.6 4.8 38 75-112 13-59 (75)
89 3s6e_A RNA-binding protein 39; 38.4 51 0.0017 21.1 4.3 65 55-119 3-81 (114)
90 2d9o_A DNAJ (HSP40) homolog, s 34.6 83 0.0028 19.5 6.7 39 75-113 31-73 (100)
91 3s7r_A Heterogeneous nuclear r 34.2 62 0.0021 18.9 4.1 51 62-114 14-73 (87)
92 1whv_A Poly(A)-specific ribonu 32.6 72 0.0025 20.0 4.0 38 75-112 29-67 (100)
93 2pe8_A Splicing factor 45; RRM 32.6 91 0.0031 19.4 5.1 64 57-120 6-83 (105)
94 3beg_B Splicing factor, argini 32.2 96 0.0033 19.5 5.6 50 62-113 19-70 (115)
95 2jwn_A Embryonic polyadenylate 30.3 1E+02 0.0035 19.5 4.9 48 63-112 40-96 (124)
96 2do4_A Squamous cell carcinoma 30.1 93 0.0032 18.7 4.9 50 62-113 20-77 (100)
97 2bz2_A Negative elongation fac 28.8 1.1E+02 0.0037 19.6 4.8 48 62-113 42-92 (121)
98 1x4c_A Splicing factor, argini 28.2 1.1E+02 0.0037 18.9 7.5 50 62-113 18-69 (108)
99 3v4m_A Splicing factor U2AF 65 27.5 1.1E+02 0.0039 18.9 6.0 46 75-120 29-86 (105)
100 3ex7_B RNA-binding protein 8A; 26.3 1.3E+02 0.0044 19.1 5.6 57 62-120 25-91 (126)
101 4f25_A Polyadenylate-binding p 26.1 1.2E+02 0.0043 18.9 5.3 49 63-113 9-64 (115)
102 2kxn_B Transformer-2 protein h 25.9 1.4E+02 0.0047 19.3 8.0 51 61-113 48-107 (129)
103 2dnh_A Bruno-like 5, RNA bindi 25.5 1.2E+02 0.004 18.4 4.9 50 62-113 18-75 (105)
104 2cqc_A Arginine/serine-rich sp 25.4 1.1E+02 0.0038 18.0 7.2 51 61-113 17-76 (95)
105 2dgs_A DAZ-associated protein 24.9 1.2E+02 0.004 18.2 6.2 56 62-119 13-77 (99)
106 1sjq_A Polypyrimidine tract-bi 24.7 1.3E+02 0.0046 18.8 7.0 50 61-112 18-70 (105)
107 3pgw_S U1-70K; protein-RNA com 24.7 1.8E+02 0.0061 23.8 6.3 51 61-113 104-163 (437)
108 3zzy_A Polypyrimidine tract-bi 24.7 1.5E+02 0.0052 19.4 4.9 49 63-113 32-85 (130)
109 3s8s_A Histone-lysine N-methyl 24.6 1.3E+02 0.0046 18.7 4.9 50 62-113 9-67 (110)
110 2cq3_A RNA-binding protein 9; 24.5 1.2E+02 0.0042 18.3 5.6 50 62-113 18-74 (103)
111 2dh8_A DAZ-associated protein 24.5 1.2E+02 0.0043 18.3 4.6 55 62-118 19-82 (105)
112 3ns6_A Eukaryotic translation 24.4 1.2E+02 0.0043 18.3 6.0 50 63-112 10-72 (100)
113 1p27_B RNA-binding protein 8A; 24.1 1.3E+02 0.0044 18.3 6.2 49 63-113 27-84 (106)
114 1sjr_A Polypyrimidine tract-bi 23.8 1.8E+02 0.0063 20.0 6.0 49 63-113 50-103 (164)
115 1whx_A Hypothetical protein ri 23.3 1.4E+02 0.0048 18.5 5.7 58 63-122 14-75 (111)
116 2cq4_A RNA binding motif prote 23.3 1.3E+02 0.0045 18.6 4.4 48 63-112 29-85 (114)
117 2ad9_A Polypyrimidine tract-bi 23.1 1.6E+02 0.0053 19.0 6.3 50 61-112 33-85 (119)
118 2cjk_A Nuclear polyadenylated 23.0 1.7E+02 0.0058 19.4 5.3 50 63-114 91-149 (167)
119 2cpf_A RNA binding motif prote 22.8 1.3E+02 0.0044 17.9 5.4 49 63-113 9-69 (98)
120 2dgv_A HnRNP M, heterogeneous 22.3 1.3E+02 0.0043 17.6 6.3 49 63-113 12-67 (92)
121 1oo0_B CG8781-PA, drosophila Y 22.3 1.4E+02 0.0049 18.2 5.8 49 63-113 30-87 (110)
122 2ywk_A Putative RNA-binding pr 22.0 1.3E+02 0.0045 17.7 4.9 49 62-112 19-75 (95)
123 1wex_A Hypothetical protein (r 21.9 1.5E+02 0.0051 18.3 5.4 50 61-112 17-69 (104)
124 2hvz_A Splicing factor, argini 21.8 1.4E+02 0.0048 17.9 5.6 39 75-113 14-56 (101)
125 3mdf_A Peptidyl-prolyl CIS-tra 21.8 1.2E+02 0.0042 17.3 5.8 49 62-112 10-67 (85)
126 2cpi_A CCR4-NOT transcription 21.7 84 0.0029 19.6 3.1 56 62-119 18-89 (111)
127 2voo_A Lupus LA protein; RNA-b 21.7 1.3E+02 0.0046 21.1 4.5 50 63-114 113-170 (193)
128 1x5p_A Negative elongation fac 21.7 1.4E+02 0.0047 17.8 7.2 48 62-113 18-68 (97)
129 1whw_A Hypothetical protein ri 21.6 1.4E+02 0.0047 17.8 6.0 49 63-113 12-69 (99)
130 1x4e_A RNA binding motif, sing 21.3 1.3E+02 0.0044 17.3 5.0 49 62-112 8-65 (85)
131 2err_A Ataxin-2-binding protei 21.2 1.2E+02 0.004 18.8 3.7 49 63-113 33-88 (109)
132 2fy1_A RNA-binding motif prote 21.1 1.6E+02 0.0056 18.4 5.0 49 63-113 11-67 (116)
133 2p22_C Protein SRN2; endosome, 20.8 2.3E+02 0.008 20.1 6.2 54 144-198 111-167 (192)
134 3pgw_A U1-A; protein-RNA compl 20.5 1.9E+02 0.0064 21.5 5.4 52 62-113 12-71 (282)
135 2x1f_A MRNA 3'-END-processing 20.4 1.5E+02 0.005 17.6 6.0 39 75-113 16-63 (96)
136 3ulh_A THO complex subunit 4; 20.1 1.6E+02 0.0054 17.9 5.4 50 62-113 32-89 (107)
137 2cqb_A Peptidyl-prolyl CIS-tra 20.1 1.2E+02 0.0042 18.2 3.6 50 62-113 15-73 (102)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.97 E-value=1.5e-29 Score=214.23 Aligned_cols=201 Identities=23% Similarity=0.382 Sum_probs=158.4
Q ss_pred CCCCCCCCCCCCCcccccccccC--CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFLG--RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT 126 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~ 126 (267)
+++.+.||||+++|++||+..+. .+++..+.+|+++||+|+++++|+.++|+++||+++++++.+++..|.+++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 34567899999999999999883 3678899999999999999999999999999999999999988888988876554
Q ss_pred ccccccCCcceEeccCCcchHHHHHHHHHhhcCh--hhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Q 039415 127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSK--ANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVS 204 (267)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~ 204 (267)
......++.|++++++|+.|+++||+++ +.|+. ..++.+.+.+.++++.+++.+...+++++|+.+.+..+++|+|+
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~ 162 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS 162 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence 4444444467877777999999999996 99874 45777899999999999999976556789999999999999999
Q ss_pred HHHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhccccccCc
Q 039415 205 SMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDL 252 (267)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~ 252 (267)
.++||.+++.. ++....+.+..+.+........+.+++|+++++|.
T Consensus 163 ~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~ 208 (494)
T 3swz_A 163 LICFNTSYKNG--DPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN 208 (494)
T ss_dssp HHHHSCCCCTT--CTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC
T ss_pred HHHcCCcCCCC--CHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc
Confidence 99999988764 34444444444554555555556778899988883
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.96 E-value=8.7e-29 Score=210.22 Aligned_cols=200 Identities=17% Similarity=0.310 Sum_probs=141.5
Q ss_pred CCCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 039415 48 GKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA 127 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~ 127 (267)
+.++.+.||||+++|++||+..+..+++..+.+++++||+||++++|+.++|+++||+++++|+.+++..|.+++.....
T Consensus 4 ~~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 83 (507)
T 3pm0_A 4 KTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF 83 (507)
T ss_dssp ------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred ccCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence 45566789999999999999999889999999999999999999999999999999999999998777788877765443
Q ss_pred cccccCCcceEeccCCcchHHHHHHHHHhhcChhh------HHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHH
Q 039415 128 STLTYRASDTVFASYGSKWQILRKLFVHEVLSKAN------LDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTM 199 (267)
Q Consensus 128 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~------l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~ 199 (267)
..... +.+++++.+|+.|+++|++++ +.|+... ++.+.+.+.++++++++.+... +++++|+.+.+..++
T Consensus 84 ~~~~~-g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~ 161 (507)
T 3pm0_A 84 RVVSG-GRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAV 161 (507)
T ss_dssp HHGGG-GTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHH
T ss_pred HhhcC-CCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHH
Confidence 33332 367766666999999999996 8765433 3448899999999999999764 357899999999999
Q ss_pred HHHHHHHHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhccccccC
Q 039415 200 INMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFD 251 (267)
Q Consensus 200 ~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p 251 (267)
+|+++.++||.+++.. ++....+.+.+..+........+..++|++.++|
T Consensus 162 ~dvi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp 211 (507)
T 3pm0_A 162 ANVMSAVCFGCRYSHD--DPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFP 211 (507)
T ss_dssp HHHHHHHHTSCCCCTT--CHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSC
T ss_pred HHHHHHHHccccCCCC--CHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcC
Confidence 9999999999998765 4455556556666666555444566788888887
No 3
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.95 E-value=2.8e-27 Score=200.45 Aligned_cols=201 Identities=20% Similarity=0.325 Sum_probs=154.6
Q ss_pred CCCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 039415 48 GKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA 127 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~ 127 (267)
+.++.+.+|||+++|++||+..+..+++..+.+++++||||+++++|+.++++++||+++++|+.+++..|.+++.....
T Consensus 11 ~~~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~ 90 (495)
T 2hi4_A 11 VPKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTS 90 (495)
T ss_dssp CCTTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHH
T ss_pred CCCCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHH
Confidence 34444556999999999999888778899999999999999999999999999999999999998776678876644322
Q ss_pred cccccCCcceEec-cCCcchHHHHHHHHHhhcCh---hhH---H---HHHHHHHHHHHHHHHHHHh--cCCCceeHHHHH
Q 039415 128 STLTYRASDTVFA-SYGSKWQILRKLFVHEVLSK---ANL---D---AFYAFRRDEMRKIIREIYN--KDSKAIDIGDIA 195 (267)
Q Consensus 128 ~~~~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~---~~l---~---~~~~~~~~~~~~~~~~l~~--~~~~~~d~~~~~ 195 (267)
.... ++.+++++ ++|+.|+++||+++ ++|+. .++ + .+.+.+.++++++++.|.. .+++++|+.+.+
T Consensus 91 ~~~~-~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~ 168 (495)
T 2hi4_A 91 TLIT-DGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQV 168 (495)
T ss_dssp HTST-TSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHH
T ss_pred HHhc-CCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHH
Confidence 2222 23677776 45999999999996 88543 332 2 6889999999999999976 256789999999
Q ss_pred HHHHHHHHHHHHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhccccccCc
Q 039415 196 YVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDL 252 (267)
Q Consensus 196 ~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~ 252 (267)
..+++|+++.++||.+++.. ++...++.+.+.++...........++|+++++|.
T Consensus 169 ~~~~~dvi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~ 223 (495)
T 2hi4_A 169 VVSVANVIGAMCFGQHFPES--SDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN 223 (495)
T ss_dssp HHHHHHHHHHHHHGGGSCTT--CHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC
T ss_pred HHHHHHHHHHHHcCCCCCCC--CHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc
Confidence 99999999999999988754 34444455555555544333334567888877773
No 4
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.95 E-value=4.3e-27 Score=198.28 Aligned_cols=198 Identities=19% Similarity=0.349 Sum_probs=152.8
Q ss_pred CCCCCCCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 039415 48 GKGNSQLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT 126 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~ 126 (267)
..++.+.||||+++|++||+..+ ..+++..+.+|+++||++|++++|+.++|+++||+++++|+.++...|.+++....
T Consensus 5 ~~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~ 84 (476)
T 3e6i_A 5 TSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPA 84 (476)
T ss_dssp -----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGG
T ss_pred ccCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCch
Confidence 35566889999999999999998 67889999999999999999999999999999999999999887778887765444
Q ss_pred ccccccCCcceEeccCCcchHHHHHHHHHhhcChhhH--HHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Q 039415 127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANL--DAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVS 204 (267)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~ 204 (267)
...... .++++.+ |+.|+++|++.. +.|....+ +.+.+.+.++++.+++.+....++++|+.+.+..+++|+++
T Consensus 85 ~~~~~~--~~l~~~~-g~~w~~~Rr~~~-~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~ 160 (476)
T 3e6i_A 85 FHAHRD--RGIIFNN-GPTWKDIRRFSL-TTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIA 160 (476)
T ss_dssp GGGGTT--SSSTTCC-STTHHHHHHHHH-HHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHH
T ss_pred hheecC--CCEEecC-CcHHHHHHHHHH-HHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHH
Confidence 433332 3777776 999999999986 87765443 44678999999999999976556789999999999999999
Q ss_pred HHHhcCccCCCCCchHHHHHHHHHHHHHHhhcCC--cccchhc-cccccC
Q 039415 205 SMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARP--NVSDFFP-MLARFD 251 (267)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P-~l~~~p 251 (267)
.++||.+++.. ++....+.+.+.+.+...... .+...+| ++.++|
T Consensus 161 ~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp 208 (476)
T 3e6i_A 161 DILFRKHFDYN--DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP 208 (476)
T ss_dssp HHHHSCCCCTT--CHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC
T ss_pred HHHcCCCCCCC--CHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC
Confidence 99999999875 444455555665555443321 1234456 566666
No 5
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.95 E-value=2.5e-28 Score=206.90 Aligned_cols=195 Identities=18% Similarity=0.288 Sum_probs=147.4
Q ss_pred hcCCCCCCCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCc
Q 039415 46 KVGKGNSQLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPT 124 (267)
Q Consensus 46 ~~~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~ 124 (267)
++..++.+.||||++ +..+ ..+++..+.+++++||||+++++|+.++|+++||+++++|+.+++..|.+++..
T Consensus 22 ~~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~ 95 (496)
T 3qz1_A 22 RWKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQI 95 (496)
T ss_dssp -------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCC
T ss_pred hhhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence 344566789999987 3344 678899999999999999999999999999999999999998887788887765
Q ss_pred ccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Q 039415 125 ITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVS 204 (267)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~ 204 (267)
........++.++++.++|+.|+++||+++ ++|+.+.++.+.+.+.++++++++.+...+++++|+.+++..+++|+|+
T Consensus 96 ~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~ 174 (496)
T 3qz1_A 96 PSYKLVSQRCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIIC 174 (496)
T ss_dssp TTTTTSCTTCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTT
T ss_pred chHHHhcCCCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHH
Confidence 443333333347777766999999999996 9999777788999999999999999976456789999999999999999
Q ss_pred HHHhcCccCCCCCchHHHHHHHHHHHHHHhhcC--CcccchhccccccCc
Q 039415 205 SMLWGGTTQGEKGTSLAAEFRVEVSQALQLLAR--PNVSDFFPMLARFDL 252 (267)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~p~ 252 (267)
.++||. .. ++....+.+.+......... ..+.+++|+++++|.
T Consensus 175 ~~~fG~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~ 219 (496)
T 3qz1_A 175 YLTFGN---KE--DTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN 219 (496)
T ss_dssp TTSTTC---CC--HHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC
T ss_pred HHhcCC---CC--ChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh
Confidence 999998 11 34444555555544433322 224556788888874
No 6
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.95 E-value=7.1e-27 Score=197.26 Aligned_cols=198 Identities=20% Similarity=0.297 Sum_probs=151.8
Q ss_pred CCCCCCCCCCCCcccccccccCCc---hHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 039415 50 GNSQLPPGPRGLPLVVYLPFLGRN---LHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT 126 (267)
Q Consensus 50 ~~~~~~pgp~~~p~~G~~~~~~~~---~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~ 126 (267)
++.+.||||+++|++||+..+..+ ++..+.+++++||||+++++|+.++++++||+++++|+.+++..|.+++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 456789999999999999887333 88999999999999999999999999999999999999877667877764332
Q ss_pred ccccccCCcceEeccCCcchHHHHHHHHHhhcChhhH--HHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Q 039415 127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANL--DAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVS 204 (267)
Q Consensus 127 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~ 204 (267)
...+.. +.++++..+|+.|+++|++++ ++|+...+ +.+.+.+.++++.+++.+...+++++|+.+.+..+++|+++
T Consensus 89 ~~~~~~-~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~ 166 (481)
T 3czh_A 89 FMKMTK-MGGLLNSRYGRGWVDHRRLAV-NSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITN 166 (481)
T ss_dssp HHHHHT-TCSSTTCCSSHHHHHHHHHHH-HHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHH
T ss_pred HHhhcC-CCCeEeCCCChHHHHHHHHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHH
Confidence 222222 245555445999999999996 99986544 67889999999999999976445689999999999999999
Q ss_pred HHHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCc--ccchhccccccC
Q 039415 205 SMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPN--VSDFFPMLARFD 251 (267)
Q Consensus 205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~~p 251 (267)
.++||.+++.. ++...++.+.+.+++....... +...+|+++++|
T Consensus 167 ~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp 213 (481)
T 3czh_A 167 LIIFGERFTYE--DTDFQHMIELFSENVELAASASVFLYNAFPWIGILP 213 (481)
T ss_dssp HHHHSSCCCTT--CHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCS
T ss_pred HHHcCCCCCCC--CHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCC
Confidence 99999988754 4444555555666555433211 345678877676
No 7
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.95 E-value=2.1e-26 Score=194.17 Aligned_cols=184 Identities=18% Similarity=0.290 Sum_probs=142.5
Q ss_pred cCCCCCCCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 039415 47 VGKGNSQLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI 125 (267)
Q Consensus 47 ~~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~ 125 (267)
+..++.++||||+++|++||++.+ ..+++..+.+|+++|||||++++|+.++|+++||+++++|+.+++..|.+++...
T Consensus 4 ~~ss~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~ 83 (479)
T 3tbg_A 4 KTSSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVP 83 (479)
T ss_dssp -----CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCG
T ss_pred CCCCCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchH
Confidence 345556899999999999999998 6788899999999999999999999999999999999999998888888887655
Q ss_pred cccccccC--CcceEeccCCcchHHHHHHHHHhhcChhhHH--HHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHH
Q 039415 126 TASTLTYR--ASDTVFASYGSKWQILRKLFVHEVLSKANLD--AFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMIN 201 (267)
Q Consensus 126 ~~~~~~~~--~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~--~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ 201 (267)
.......+ +.+++++.+|+.|+++|++++ +.|+...+. .+.+.+....+.+...+....++.+|+.+.+..+++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (479)
T 3tbg_A 84 ITQILGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSN 162 (479)
T ss_dssp GGGGGTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHH
T ss_pred HHHHhccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHH
Confidence 54443322 345666667999999999996 888776654 3455666666666666665466789999999999999
Q ss_pred HHHHHHhcCccCCCCCchHHHHHHHHHHHHHH
Q 039415 202 MVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQ 233 (267)
Q Consensus 202 ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
+++.++||..++.. +.....+.+.......
T Consensus 163 ~~~~~~fg~~~~~~--~~~~~~~~~~~~~~~~ 192 (479)
T 3tbg_A 163 VIASLTCGRRFEYD--DPRFLRLLDLAQEGLK 192 (479)
T ss_dssp HHHHHHHSCCCCTT--CHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCccccc--chhhhhhhhhhhhhhh
Confidence 99999999999876 3444444444444333
No 8
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.95 E-value=1.6e-26 Score=194.95 Aligned_cols=177 Identities=19% Similarity=0.376 Sum_probs=142.7
Q ss_pred CCCCCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 039415 50 GNSQLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAS 128 (267)
Q Consensus 50 ~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~ 128 (267)
++.+.||||+++|++||+..+ ..+++..+.+++++|||++++++|+.++|+++||+++++|+.++...|.+++......
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 1po5_A 7 SKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD 86 (476)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGC
T ss_pred CCCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence 334689999999999999998 6788999999999999999999999999999999999999976666787665432222
Q ss_pred ccccCCcceEeccCCcchHHHHHHHHHhhcChh--hHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHH
Q 039415 129 TLTYRASDTVFASYGSKWQILRKLFVHEVLSKA--NLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSM 206 (267)
Q Consensus 129 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~ 206 (267)
.... +.++++++ |+.|+++||+++ +.|+.. .++.+.+.+.++++++++.|....++++|+.+.+..+++|+++.+
T Consensus 87 ~~~~-~~~l~~~~-g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~ 163 (476)
T 1po5_A 87 PIFQ-GYGVIFAN-GERWRALRRFSL-ATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI 163 (476)
T ss_dssp SCCS-SCCCCCSS-HHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHH
T ss_pred hhcC-CCceEecC-CcHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHH
Confidence 2222 36777776 999999999996 999877 567889999999999999997644578999999999999999999
Q ss_pred HhcCccCCCCCchHHHHHHHHHHHH
Q 039415 207 LWGGTTQGEKGTSLAAEFRVEVSQA 231 (267)
Q Consensus 207 ~fG~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
+||.+++.. ++...++.+.+...
T Consensus 164 ~fG~~~~~~--~~~~~~~~~~~~~~ 186 (476)
T 1po5_A 164 VFGKRFDYK--DPVFLRLLDLFFQS 186 (476)
T ss_dssp HHSSCCCTT--CHHHHHHHHHHHHH
T ss_pred HcCCCCCCC--CHHHHHHHHHHHHH
Confidence 999998754 33334444444443
No 9
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.95 E-value=1.6e-26 Score=194.95 Aligned_cols=196 Identities=18% Similarity=0.328 Sum_probs=153.3
Q ss_pred CCCCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccc
Q 039415 51 NSQLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAST 129 (267)
Q Consensus 51 ~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~ 129 (267)
+.+.||||+++|++||+..+ ..+++..+.+++++||||+++++|+.++|+++||+++++|+.++...|.+++.......
T Consensus 8 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~ 87 (476)
T 2fdv_A 8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW 87 (476)
T ss_dssp CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH
T ss_pred cCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh
Confidence 34679999999999999998 67889999999999999999999999999999999999999766667776654322222
Q ss_pred cccCCcceEeccCCcchHHHHHHHHHhhcChhhH--HHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Q 039415 130 LTYRASDTVFASYGSKWQILRKLFVHEVLSKANL--DAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSML 207 (267)
Q Consensus 130 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~ 207 (267)
... +.++++.+ |+.|+++|++++ ++|+...+ +.+.+.+.++++++++.|...+++++|+.+.+..+++|+++.++
T Consensus 88 ~~~-~~~l~~~~-g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~ 164 (476)
T 2fdv_A 88 VFK-GYGVVFSN-GERAKQLRRFSI-ATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIV 164 (476)
T ss_dssp HHT-TCSSSSCC-HHHHHHHHHHHH-HHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred hcC-CCCeEecC-chHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHH
Confidence 222 36777776 999999999996 99988766 78999999999999999976445689999999999999999999
Q ss_pred hcCccCCCCCchHHHHHHHHHHHHHHhhcCC--cccchhcc-ccccC
Q 039415 208 WGGTTQGEKGTSLAAEFRVEVSQALQLLARP--NVSDFFPM-LARFD 251 (267)
Q Consensus 208 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~p 251 (267)
||.+++.. ++...++.+.+...+...... .+...+|+ ++++|
T Consensus 165 fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~ 209 (476)
T 2fdv_A 165 FGDRFDYK--DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP 209 (476)
T ss_dssp HSSCCCTT--CHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC
T ss_pred cCCcCCCC--CHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC
Confidence 99998754 334455555555554432211 12335666 55565
No 10
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.94 E-value=7.3e-27 Score=197.18 Aligned_cols=188 Identities=15% Similarity=0.197 Sum_probs=148.6
Q ss_pred hhcCCCCCCCCCCCCCCccccccccc-----CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccC
Q 039415 45 MKVGKGNSQLPPGPRGLPLVVYLPFL-----GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFA 119 (267)
Q Consensus 45 ~~~~~~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~ 119 (267)
+....++.+.+|||+++|++||+..+ .++++..+.+++++||||+++++|+.++|+++||+++++|+.++ ..|.
T Consensus 16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~ 94 (482)
T 3k9v_A 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHP 94 (482)
T ss_dssp ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSC
T ss_pred cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCC
Confidence 44567788899999999999998887 24678899999999999999999999999999999999999864 4677
Q ss_pred CCCCccc---ccccccCCcceEeccCCcchHHHHHHHHHhhc-ChhhHHHHHHHHHHHHHHHHHHHHhc---CCCceeHH
Q 039415 120 NRNPTIT---ASTLTYRASDTVFASYGSKWQILRKLFVHEVL-SKANLDAFYAFRRDEMRKIIREIYNK---DSKAIDIG 192 (267)
Q Consensus 120 ~~~~~~~---~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~~d~~ 192 (267)
+++.... .......+.++++.+ |+.|+++||+++ +.| +.+.++.+.+.+.++++.+++.+.+. +++++|+.
T Consensus 95 ~r~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~~-~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~ 172 (482)
T 3k9v_A 95 QRLEIKPWKAYRDHRNEAYGLMILE-GQEWQRVRSAFQ-KKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLY 172 (482)
T ss_dssp CCCCCHHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHHH-HHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHH
T ss_pred CCCCchHHHHHHHhcCCCCCceeCC-CchHHHHHHHhh-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHH
Confidence 7664321 111222246777776 999999999997 876 78889999999999999999999764 35689999
Q ss_pred HHHHHHHHHHHHHHHhcCccCCCCC--chHHHHHHHHHHHHHHhh
Q 039415 193 DIAYVTMINMVSSMLWGGTTQGEKG--TSLAAEFRVEVSQALQLL 235 (267)
Q Consensus 193 ~~~~~~~~~ii~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~ 235 (267)
+++..+++|+++.++||.+++..++ .+...++.+.+..++...
T Consensus 173 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (482)
T 3k9v_A 173 SELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTF 217 (482)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999865431 133455666666655443
No 11
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.94 E-value=8.3e-27 Score=197.89 Aligned_cols=162 Identities=15% Similarity=0.270 Sum_probs=131.9
Q ss_pred CCCCCCCCCCCCCcccccccccCC----chHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCc
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFLGR----NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPT 124 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~~~----~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~ 124 (267)
+++.+.||||+++|++||++.+.. +.+..+.+++++||||+++++|+.++|+++||++++++++++ .|.+++..
T Consensus 41 ~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~ 118 (503)
T 3s79_A 41 YEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGS 118 (503)
T ss_dssp ----CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCC
T ss_pred HhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchh
Confidence 345678999999999999988732 345678899999999999999999999999999999999643 56666543
Q ss_pred ccc-cccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHH
Q 039415 125 ITA-STLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMIN 201 (267)
Q Consensus 125 ~~~-~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ 201 (267)
... ......+.++++..+|+.|+++||+++ ++|+...++.+.+.+.++++++++.|... .++++|+.+++..+++|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~ 197 (503)
T 3s79_A 119 KLGLQCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLD 197 (503)
T ss_dssp HHHHHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHH
T ss_pred hhhhhhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHH
Confidence 222 222223467666666999999999997 99999999999999999999999988653 45689999999999999
Q ss_pred HHHHHHhcCccC
Q 039415 202 MVSSMLWGGTTQ 213 (267)
Q Consensus 202 ii~~~~fG~~~~ 213 (267)
+++.++||.+++
T Consensus 198 vi~~~~fG~~~~ 209 (503)
T 3s79_A 198 TSNTLFLRIPLD 209 (503)
T ss_dssp HHHHHHTCCCCC
T ss_pred HHHHHHcCcccC
Confidence 999999999875
No 12
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.94 E-value=6.2e-27 Score=197.81 Aligned_cols=161 Identities=18% Similarity=0.322 Sum_probs=139.6
Q ss_pred CCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhc-ccccCCCCCccccc
Q 039415 50 GNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDH-DRKFANRNPTITAS 128 (267)
Q Consensus 50 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~-~~~~~~~~~~~~~~ 128 (267)
.+++.||||+++|++||+..+..+++.++.+++++||+++++++|+.++|+++||+++++|+.++ ...|.+++......
T Consensus 11 ~k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~ 90 (485)
T 3nxu_A 11 FKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG 90 (485)
T ss_dssp HHHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG
T ss_pred HhhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc
Confidence 34466999999999999999988889999999999999999999999999999999999999876 45677665443322
Q ss_pred ccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHHHH
Q 039415 129 TLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMVSSM 206 (267)
Q Consensus 129 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii~~~ 206 (267)
.. +.++++.+ |+.|+++||+++ ++|+.++++.+.+.+.+.++++++.+.+. +++++|+.+.+..+++|+++.+
T Consensus 91 -~~--~~~l~~~~-g~~w~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~ 165 (485)
T 3nxu_A 91 -FM--KSAISIAE-DEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITST 165 (485)
T ss_dssp -GG--GGSTTTCC-HHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHH
T ss_pred -cc--ccCccccC-CcHHHHHHhhcC-hhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHH
Confidence 22 35666666 999999999997 99999999999999999999999999653 4678999999999999999999
Q ss_pred HhcCccCCC
Q 039415 207 LWGGTTQGE 215 (267)
Q Consensus 207 ~fG~~~~~~ 215 (267)
+||.+++..
T Consensus 166 ~fG~~~~~~ 174 (485)
T 3nxu_A 166 SFGVNIDSL 174 (485)
T ss_dssp HHSCCCCGG
T ss_pred HcCCccccc
Confidence 999998765
No 13
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.94 E-value=3.2e-26 Score=193.07 Aligned_cols=197 Identities=21% Similarity=0.393 Sum_probs=142.8
Q ss_pred CCCCCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 039415 50 GNSQLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAS 128 (267)
Q Consensus 50 ~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~ 128 (267)
++.+.||||+++|++||+..+ ..+++..+.+++++||||+++++|+.++|+++||+++++|+.++...|.+++......
T Consensus 8 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~ 87 (477)
T 1r9o_A 8 GRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAE 87 (477)
T ss_dssp -CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCC
T ss_pred CCCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhh
Confidence 334689999999999999988 5678889999999999999999998899999999999999976666787765432222
Q ss_pred ccccCCcceEeccCCcchHHHHHHHHHhhcChh--hHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHH
Q 039415 129 TLTYRASDTVFASYGSKWQILRKLFVHEVLSKA--NLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSM 206 (267)
Q Consensus 129 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~ 206 (267)
.... +.++++.+ |+.|+++||++. ++|+.. .++.+.+.+.++++++++.|....++++|+.+.+..+++|+++.+
T Consensus 88 ~~~~-~~~l~~~~-g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~ 164 (477)
T 1r9o_A 88 RANR-GFGIVFSN-GKKWKEIRRFSL-MTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSI 164 (477)
T ss_dssp TTTC-TTSSTTCC-HHHHHHHHHHHH-HHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHH
T ss_pred hccC-CCceEecC-ChHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHH
Confidence 2222 35777775 999999999996 999887 456788999999999999997644568999999999999999999
Q ss_pred HhcCccCCCCCchHHHHHHHHHHHHHHhhcCC--cccchhcc-ccccC
Q 039415 207 LWGGTTQGEKGTSLAAEFRVEVSQALQLLARP--NVSDFFPM-LARFD 251 (267)
Q Consensus 207 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~p 251 (267)
+||.+++.. ++....+.+.+.+.+...... .+...+|+ ++++|
T Consensus 165 ~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp 210 (477)
T 1r9o_A 165 IFHKRFDYK--DQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP 210 (477)
T ss_dssp HHSCCCCTT--CHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCT
T ss_pred HccCcCCCC--CHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc
Confidence 999998754 334445555555554332211 12345676 45555
No 14
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.94 E-value=2e-26 Score=192.94 Aligned_cols=193 Identities=17% Similarity=0.218 Sum_probs=153.7
Q ss_pred CCCCCCCCC-CcccccccccCCchHHHHHHHHHHhC-CeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccc
Q 039415 52 SQLPPGPRG-LPLVVYLPFLGRNLHRIVMDLAIVYG-PIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAST 129 (267)
Q Consensus 52 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~ 129 (267)
.+.||||++ +|++||+..+..+++.++.+++++|| ++|++++++.++|+++||+++++++.+++..|.+++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 467899665 99999999987889999999999999 9999999999999999999999999887777777665443333
Q ss_pred cccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHH-HHHhcCCCceeHHHHHHHHHHHHHHHHHh
Q 039415 130 LTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIR-EIYNKDSKAIDIGDIAYVTMINMVSSMLW 208 (267)
Q Consensus 130 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~-~l~~~~~~~~d~~~~~~~~~~~ii~~~~f 208 (267)
.. +.++++..+|+.|+++|++++ ++|+.++++.+.+.+.++++++++ .|.. .++++|+.+.+..+++++++.++|
T Consensus 82 ~~--g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~-~~~~vd~~~~~~~~~~~~i~~~~f 157 (450)
T 3gw9_A 82 VF--GEGVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFMAANWDK-DEGEINLLEDCSTMIINTACQCLF 157 (450)
T ss_dssp HH--CTTSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHHHHHHHHHHHHSCS-SEEEEEHHHHHHHHHHHHHHHHHS
T ss_pred Hh--cCCcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHhcc-CCCcccHHHHHHHHHHHHHHHHHc
Confidence 33 356666545999999999996 999999999999999999999999 6653 356799999999999999999999
Q ss_pred cCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhccccccCcc
Q 039415 209 GGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQ 253 (267)
Q Consensus 209 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~ 253 (267)
|.+++... + ..++.+.+..+.... .....++|+++++|..
T Consensus 158 G~~~~~~~-~--~~~~~~~~~~~~~~~--~~~~~~~P~l~~lp~~ 197 (450)
T 3gw9_A 158 GEDLRKRL-D--ARRFAQLLAKMESSL--IPAAVFLPILLKLPLP 197 (450)
T ss_dssp CHHHHHHS-C--HHHHHHHHHHHHHTC--CGGGGTCGGGGGSCCH
T ss_pred Ccchhhhh-h--hHHHHHHHHHHHhcc--ccchhcccchhccCCc
Confidence 98876431 1 244555555443322 2244567888888743
No 15
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.93 E-value=4.7e-26 Score=191.29 Aligned_cols=159 Identities=11% Similarity=0.152 Sum_probs=136.7
Q ss_pred CCCCCCCCC-CcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccc-cc
Q 039415 52 SQLPPGPRG-LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA-ST 129 (267)
Q Consensus 52 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~-~~ 129 (267)
.+.||+|++ +|++||++.+.++++.++.+++++|||||++++++.++|+++||+++++++.+++..|.+++..... ..
T Consensus 10 ~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~ 89 (461)
T 3ld6_A 10 VKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTP 89 (461)
T ss_dssp CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHH
T ss_pred CCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhc
Confidence 456788775 9999999999889999999999999999999999999999999999999998877777766543322 22
Q ss_pred cccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhc
Q 039415 130 LTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWG 209 (267)
Q Consensus 130 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG 209 (267)
.. |.++++..+|+.|+++|+++. ++|+.+.++.+.+.+.+.++++++.|.+ ++.+|+.+.+..+++++++.++||
T Consensus 90 ~~--g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~fG 164 (461)
T 3ld6_A 90 VF--GKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHCLHG 164 (461)
T ss_dssp HH--CTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred cC--CCccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHHHcC
Confidence 23 356666556999999999996 9999999999999999999999999876 567899999999999999999999
Q ss_pred CccCCC
Q 039415 210 GTTQGE 215 (267)
Q Consensus 210 ~~~~~~ 215 (267)
.+++..
T Consensus 165 ~~~~~~ 170 (461)
T 3ld6_A 165 KEIRSQ 170 (461)
T ss_dssp HHHHHT
T ss_pred cchhhh
Confidence 887654
No 16
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.92 E-value=2.1e-24 Score=182.40 Aligned_cols=185 Identities=14% Similarity=0.165 Sum_probs=143.7
Q ss_pred cCCCCCCCCCCCCCCccccccccc-----CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCC
Q 039415 47 VGKGNSQLPPGPRGLPLVVYLPFL-----GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANR 121 (267)
Q Consensus 47 ~~~~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~ 121 (267)
++.++.+.+|||++.++. +++.+ ..+++..+.+++++||||+++++|+.++|+++||+++++|+.+++ .|.++
T Consensus 3 r~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r 80 (487)
T 3n9y_A 3 RSPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPER 80 (487)
T ss_dssp -CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCC
T ss_pred CCCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCC
Confidence 456777889999987765 65554 236788999999999999999999999999999999999997654 67776
Q ss_pred CCcccc---cccccCCcceEeccCCcchHHHHHHHHHh-hcChhhHHHHHHHHHHHHHHHHHHHHhc------CCCceeH
Q 039415 122 NPTITA---STLTYRASDTVFASYGSKWQILRKLFVHE-VLSKANLDAFYAFRRDEMRKIIREIYNK------DSKAIDI 191 (267)
Q Consensus 122 ~~~~~~---~~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~l~~~------~~~~~d~ 191 (267)
+..... ......+.++++.+ |+.|+++|++++ + .|+.++++.+.+.+.++++++++.|... ++.++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~l~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~ 158 (487)
T 3n9y_A 81 FLIPPWVAYHQYYQRPIGVLLKK-SAAWKKDRVALN-QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDI 158 (487)
T ss_dssp CCCHHHHHHHHHTTCCCCGGGCC-HHHHHHHHHHHH-HHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECC
T ss_pred CCCcHHHHHHHHccccCCCccCC-cHHHHHHHHhcC-cccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccH
Confidence 643321 11122235676665 999999999997 7 5999999999999999999999998753 2347999
Q ss_pred HHHHHHHHHHHHHHHHhcCccCCCC--CchHHHHHHHHHHHHHHhh
Q 039415 192 GDIAYVTMINMVSSMLWGGTTQGEK--GTSLAAEFRVEVSQALQLL 235 (267)
Q Consensus 192 ~~~~~~~~~~ii~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~ 235 (267)
.+.+..+++|+++.++||.+++..+ .++....+.+.+..++...
T Consensus 159 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (487)
T 3n9y_A 159 SDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTS 204 (487)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987654 1234455666666555443
No 17
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.92 E-value=5.5e-24 Score=179.08 Aligned_cols=159 Identities=13% Similarity=0.218 Sum_probs=130.4
Q ss_pred CCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccccccc-
Q 039415 53 QLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTL- 130 (267)
Q Consensus 53 ~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~- 130 (267)
+.||||+++|++||+..+ ..+++..+.+++++||||+++++++.+.|+++||+++++|+.++ .|.+... ......
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHHH
Confidence 568999999999999988 45788899999999999999999999999999999999999542 4543221 111111
Q ss_pred ccCCcceEec-cCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHh
Q 039415 131 TYRASDTVFA-SYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-DSKAIDIGDIAYVTMINMVSSMLW 208 (267)
Q Consensus 131 ~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~d~~~~~~~~~~~ii~~~~f 208 (267)
...+.++++. .+|+.|+++||+++ ++|++++++.+.+.+.+.++++++.|... +++++|+.+.+..+++|+++.++|
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~f 158 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGF 158 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHc
Confidence 0113566665 34999999999997 99999999999999999999999999764 356899999999999999999999
Q ss_pred cCccCCC
Q 039415 209 GGTTQGE 215 (267)
Q Consensus 209 G~~~~~~ 215 (267)
|.+++..
T Consensus 159 G~~~~~~ 165 (470)
T 2ij2_A 159 NYRFNSF 165 (470)
T ss_dssp SCCCCGG
T ss_pred CCccccc
Confidence 9987653
No 18
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.91 E-value=2.1e-24 Score=180.42 Aligned_cols=157 Identities=15% Similarity=0.184 Sum_probs=128.7
Q ss_pred hcCCCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 039415 46 KVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI 125 (267)
Q Consensus 46 ~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~ 125 (267)
.+..++.+.||||+++|++||+..+..++. ++.+++++||+++++++++.+.++++||+++++|+.+++..|..+.. .
T Consensus 5 p~~~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~-~ 82 (444)
T 2ve3_A 5 PTNLNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP-L 82 (444)
T ss_dssp ----CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC-H
T ss_pred CCCCCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh-H
Confidence 344667788999999999999988855566 78899999999999998888999999999999999766555653221 1
Q ss_pred cccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Q 039415 126 TASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSS 205 (267)
Q Consensus 126 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~ 205 (267)
...... +..++++.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.. ++++|+.+.+..+++|+++.
T Consensus 83 ~~~~~~-g~~~l~~~~-g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~vi~~ 157 (444)
T 2ve3_A 83 STRILL-GPNALATQM-GEIHRSRRKILY-QAFLPRTLDSYLPKMDGIVQGYLEQWGK--ANEVIWYPQLRRMTFDVAAT 157 (444)
T ss_dssp HHHHHH-CTTSGGGCC-HHHHHHHHHHHH-GGGCHHHHHTTHHHHHHHHHHHHHHHHH--SSEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHh-CccccccCC-chHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhcC--CCcEeHHHHHHHHHHHHHHH
Confidence 112222 223666665 999999999996 9999999999999999999999999975 67899999999999999999
Q ss_pred HHhc
Q 039415 206 MLWG 209 (267)
Q Consensus 206 ~~fG 209 (267)
++||
T Consensus 158 ~~fG 161 (444)
T 2ve3_A 158 LFMG 161 (444)
T ss_dssp HHTC
T ss_pred HHcC
Confidence 9999
No 19
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.91 E-value=1e-24 Score=183.16 Aligned_cols=162 Identities=10% Similarity=0.141 Sum_probs=134.5
Q ss_pred CCCCCCCCCC-CCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 039415 48 GKGNSQLPPG-PRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT 126 (267)
Q Consensus 48 ~~~~~~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~ 126 (267)
..++.+.||| |+++|++||+..+..+++.++.+++++|||||++++++.++|++++|+.+++++.++...+.++.....
T Consensus 6 ~~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~ 85 (461)
T 3i3k_A 6 LPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSR 85 (461)
T ss_dssp ----CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHH
T ss_pred CCCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHH
Confidence 3456678999 889999999999988899999999999999999999999999999999999999877655554332221
Q ss_pred -ccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Q 039415 127 -ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSS 205 (267)
Q Consensus 127 -~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~ 205 (267)
..... |.++++..+|+.|+++||++. +.|+.+.++.+.+.+.++++++++.|.. ++.+|+.+.+..+++++++.
T Consensus 86 ~~~~~~--g~g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~~~~ 160 (461)
T 3i3k_A 86 LTTPVF--GKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASH 160 (461)
T ss_dssp HHHHHH--CTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHH
T ss_pred hhhhhc--CCeeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcCHHHHHHHHHHHHHHH
Confidence 12223 357766655899999999996 9999999999999999999999999865 45689999999999999999
Q ss_pred HHhcCccCC
Q 039415 206 MLWGGTTQG 214 (267)
Q Consensus 206 ~~fG~~~~~ 214 (267)
++||.++..
T Consensus 161 ~~~G~~~~~ 169 (461)
T 3i3k_A 161 CLHGKEIRS 169 (461)
T ss_dssp HHTCHHHHH
T ss_pred HHccHhhhh
Confidence 999987654
No 20
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.90 E-value=4e-24 Score=179.79 Aligned_cols=170 Identities=14% Similarity=0.180 Sum_probs=123.0
Q ss_pred CCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhccccc-CCCCCccccccc
Q 039415 52 SQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKF-ANRNPTITASTL 130 (267)
Q Consensus 52 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~-~~~~~~~~~~~~ 130 (267)
...||||+++|++||+..+..+++.++.++++ ||||+++++++.++++++||+++++|+.++ .| .+++........
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~ 98 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL 98 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh
Confidence 55688999999999999998889999999987 999999999999999999999999999765 55 333332222222
Q ss_pred ccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhcC
Q 039415 131 TYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGG 210 (267)
Q Consensus 131 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG~ 210 (267)
.+ ..++++.+ |+.|+++|++++ ++|+.++++.+.+.+.+.++++++.|.. ++++|+.+.+..+++++++.++||.
T Consensus 99 ~g-~~~l~~~d-g~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~vi~~~~~g~ 173 (467)
T 3dbg_A 99 LG-KEGVATAN-GPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEEAHALTERWQP--GKTVDATSESFRVAVRVAARCLLRG 173 (467)
T ss_dssp -------------------CGGGH-HHHSTTTSTTTHHHHHHHHHHHHHHSCT--TSCEEHHHHHHHHHHHHHHHHHSCS
T ss_pred cC-CCCcccCC-cHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhcc--CCcCcHHHHHHHHHHHHHHHHHhCC
Confidence 21 25677766 999999999996 9999999999999999999999999975 6789999999999999999999998
Q ss_pred ccCCCCCchHHHHHHHHHHHHHH
Q 039415 211 TTQGEKGTSLAAEFRVEVSQALQ 233 (267)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
+++. +....+.+.+..+..
T Consensus 174 ~~~~----~~~~~~~~~~~~~~~ 192 (467)
T 3dbg_A 174 QYMD----ERAERLCVALATVFR 192 (467)
T ss_dssp SCCH----HHHHHHHHHHHHHHH
T ss_pred cccc----hhHHHHHHHHHHHHH
Confidence 8763 223445555555443
No 21
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.90 E-value=2.4e-23 Score=174.48 Aligned_cols=156 Identities=14% Similarity=0.096 Sum_probs=116.1
Q ss_pred CCCCC-CCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccc
Q 039415 53 QLPPG-PRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT 131 (267)
Q Consensus 53 ~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~ 131 (267)
+.||| |.++|++||+..+..+++.++.+++++|||++++++++.++++++||+++++|+.+++..|.+++.........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 57888 88899999999888889999999999999999999999999999999999999987655677665432222222
Q ss_pred cCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhcCc
Q 039415 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGT 211 (267)
Q Consensus 132 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG~~ 211 (267)
+.++ +.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.. ++++|+.+.+..+++|+++.++||.+
T Consensus 84 --g~~~-~~~-~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fG~~ 156 (455)
T 2cib_A 84 --GEGV-VFD-ASPERRKEMLHN-AALRGEQMKGHAATIEDQVRRMIADWGE--AGEIDLLDFFAELTIYTSSACLIGKK 156 (455)
T ss_dssp --C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCCS--EEEEEHHHHHHHHHHHHHHHHHTCHH
T ss_pred --CCcc-ccC-cHHHHHHHhhhc-cccCHHHHHHHHHHHHHHHHHHHHHhCC--CCcEeHHHHHHHHHHHHHHHHHcCCC
Confidence 2354 345 899999999996 9999999999999999999999998864 46799999999999999999999998
Q ss_pred cCCC
Q 039415 212 TQGE 215 (267)
Q Consensus 212 ~~~~ 215 (267)
++..
T Consensus 157 ~~~~ 160 (455)
T 2cib_A 157 FRDQ 160 (455)
T ss_dssp HHTT
T ss_pred cchh
Confidence 8653
No 22
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.89 E-value=6.3e-23 Score=173.57 Aligned_cols=179 Identities=12% Similarity=0.153 Sum_probs=137.6
Q ss_pred cCCCCCCCCCCCCC-CcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhccc-ccCCCCCc
Q 039415 47 VGKGNSQLPPGPRG-LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDR-KFANRNPT 124 (267)
Q Consensus 47 ~~~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~-~~~~~~~~ 124 (267)
.++++.+.||||++ +|++||+..+..+++.++.+++++||||+++++++.++++++||+++++++.++.. .+..++..
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~ 86 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHH
T ss_pred hhccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHH
Confidence 44566788999998 69999999999999999999999999999999999999999999999999965431 22222111
Q ss_pred ccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-----CCCceeHHHHHHHHH
Q 039415 125 ITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-----DSKAIDIGDIAYVTM 199 (267)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-----~~~~~d~~~~~~~~~ 199 (267)
. ..... +.+.....+|+.|+++|+.+. ++|++++++.+.+.+.++++++++.+... .....|+.+.+..++
T Consensus 87 ~-~~~~~--g~~~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~ 162 (491)
T 3v8d_A 87 L-SAKAF--GHRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp H-HHHHH--TCCCCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHH
T ss_pred H-HHHhc--CCcccccccchhHHHHHHHHH-HHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHH
Confidence 1 12222 133333334999999999996 99999999999999999999999865321 134689999999999
Q ss_pred HHHHHHHHhcCccCCCCCchHHHHHHHHHHHH
Q 039415 200 INMVSSMLWGGTTQGEKGTSLAAEFRVEVSQA 231 (267)
Q Consensus 200 ~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
+++++..+||.+.... ++....+.+.++.+
T Consensus 163 ~~~~~~~~fG~~~~~~--~~~~~~~~~~~~~~ 192 (491)
T 3v8d_A 163 FEAGYLTIFGRDLTRR--DTQKAHILNNLDNF 192 (491)
T ss_dssp HHHHHHHHHCBCCSCG--GGHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcccccc--chhhhhhHHHHHHH
Confidence 9999999999987754 33334444444443
No 23
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.88 E-value=4e-22 Score=166.01 Aligned_cols=158 Identities=11% Similarity=0.109 Sum_probs=119.3
Q ss_pred CCCCCCCCCCCCCccccccc-ccCCchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 039415 49 KGNSQLPPGPRGLPLVVYLP-FLGRNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT 126 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~-~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~ 126 (267)
++.++.||||+++|++|++. .+..+++.++.++ ++||||+++++ ++.++|+++||+++++|+.++ .|.+++....
T Consensus 22 ~~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~ 98 (436)
T 2cd8_A 22 RRTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNST 98 (436)
T ss_dssp ------------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCS
T ss_pred chhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccc
Confidence 44457799999999999976 4567789999999 99999999997 778899999999999999765 5776653111
Q ss_pred ccc----cccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHH
Q 039415 127 AST----LTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMIN 201 (267)
Q Consensus 127 ~~~----~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ 201 (267)
... ... +.++++.+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|....++++|+.+.+ ..++++
T Consensus 99 ~~~~~~~~~~-~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~ 175 (436)
T 2cd8_A 99 TPLTEAEAAL-NHNMLESD-PPRHTRLRKLVA-REFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPIT 175 (436)
T ss_dssp SCCCTTGGGT-CCSGGGCC-TTHHHHHHHHHG-GGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHH
T ss_pred cccccccccc-cccccccC-chHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHH
Confidence 111 111 35666665 999999999996 9999999999999999999999999974235689999977 579999
Q ss_pred HHHHHHhcCccC
Q 039415 202 MVSSMLWGGTTQ 213 (267)
Q Consensus 202 ii~~~~fG~~~~ 213 (267)
+++. +||.+.+
T Consensus 176 vi~~-~~G~~~~ 186 (436)
T 2cd8_A 176 VISE-LLGVPEP 186 (436)
T ss_dssp HHHH-HHTCCGG
T ss_pred HHHH-HhCCCHH
Confidence 9998 7998754
No 24
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.86 E-value=3.9e-22 Score=163.83 Aligned_cols=147 Identities=14% Similarity=0.134 Sum_probs=126.0
Q ss_pred CCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCC-CcccccccccCCc
Q 039415 57 GPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRN-PTITASTLTYRAS 135 (267)
Q Consensus 57 gp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~-~~~~~~~~~~~~~ 135 (267)
++..+|++||+..+..+++.++.+++++|||+++ ++++.++++++||+++++|+.++ .|.+++ ......... +.
T Consensus 3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~ 77 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GR 77 (389)
T ss_dssp ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CS
T ss_pred ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CC
Confidence 4556899999988877889999999999999999 88888999999999999999765 677765 221222222 35
Q ss_pred ceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhcCccC
Q 039415 136 DTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 136 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG~~~~ 213 (267)
++++.+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|. ++++|+.+.+..+++|+++.++||.+.+
T Consensus 78 ~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~---~~~~dl~~~~~~~~~~vi~~~~fG~~~~ 150 (389)
T 1n97_A 78 GLLTDW-GESWKEARKALK-DPFLPKNVRGYREAMEEEARAFFGEWR---GEERDLDHEMLALSLRLLGRALFGKPLS 150 (389)
T ss_dssp STTTCC-HHHHHHHHHHHC-GGGSHHHHHTTHHHHHHHHHHHHHTCC---SCCEEHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccccCC-cHHHHHHHHHhC-cccCHHHHHHHHHHHHHHHHHHHHHcc---CCcCcHHHHHHHHHHHHHHHHHcCCcch
Confidence 677766 999999999996 999999999999999999999999986 5689999999999999999999998876
No 25
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.84 E-value=3.4e-20 Score=155.38 Aligned_cols=142 Identities=18% Similarity=0.314 Sum_probs=116.1
Q ss_pred CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccc-ccccc---cCCcceEeccCCcch
Q 039415 71 GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT-ASTLT---YRASDTVFASYGSKW 146 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~g~~w 146 (267)
+..++..+.+|+++||||+++++|+.++|+++||+++++|+.++ .|.+++.... ..... ..+.++++..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 45678899999999999999999999999999999999999643 4554432111 11110 013566665459999
Q ss_pred HHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHHHHHhcCccCCC
Q 039415 147 QILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMVSSMLWGGTTQGE 215 (267)
Q Consensus 147 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii~~~~fG~~~~~~ 215 (267)
+++||+++ ++|++++++.+.+.+.+.++++++.+... ++.++|+.+.+..+++|+++.++||.+++..
T Consensus 87 ~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~ 156 (456)
T 3mdm_A 87 HKQRRVID-LAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSML 156 (456)
T ss_dssp HHHHHHHG-GGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGG
T ss_pred HHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhh
Confidence 99999997 99999999999999999999999999765 3468999999999999999999999998765
No 26
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.84 E-value=1.9e-20 Score=158.31 Aligned_cols=164 Identities=13% Similarity=0.168 Sum_probs=124.9
Q ss_pred cCCCCCCCCCCCCC-CcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcc-cccCCCCCc
Q 039415 47 VGKGNSQLPPGPRG-LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHD-RKFANRNPT 124 (267)
Q Consensus 47 ~~~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~-~~~~~~~~~ 124 (267)
.+.++.+.||||++ +|++||+..+..+++.++.+++++||++|++++|+.++|+++||+++++|+.++. ..|.+...
T Consensus 7 ~~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~- 85 (491)
T 3dax_A 7 SRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHF- 85 (491)
T ss_dssp CCCCCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHH-
T ss_pred hhccCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHH-
Confidence 33445578899988 8999999999888999999999999999999999999999999999999996543 22322111
Q ss_pred ccccccccCCcceE-eccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-----CCCceeHHHHHHHH
Q 039415 125 ITASTLTYRASDTV-FASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-----DSKAIDIGDIAYVT 198 (267)
Q Consensus 125 ~~~~~~~~~~~~~~-~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-----~~~~~d~~~~~~~~ 198 (267)
....... +.+++ ..+ |+.|+++|+.+. ++|+.+.++.+.+.+.+.+.+.++..... ....+|+...+..+
T Consensus 86 ~~~~~~~--g~~~~~~~~-g~~w~~~r~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 161 (491)
T 3dax_A 86 ATSAKAF--GHRSIDPMD-GNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV 161 (491)
T ss_dssp HHHHHHH--TCCCCCGGG-TSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHH
T ss_pred HHHHHHc--CCCcccccc-hhHHHHHHHHHH-HhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHH
Confidence 1111122 24444 454 899999999996 89999999999998888888887665321 12357899999999
Q ss_pred HHHHHHHHHhcCccCCC
Q 039415 199 MINMVSSMLWGGTTQGE 215 (267)
Q Consensus 199 ~~~ii~~~~fG~~~~~~ 215 (267)
++++++.+.||.+.+..
T Consensus 162 i~~~~~~~~fG~~~~~~ 178 (491)
T 3dax_A 162 MFEAGYLTIFGRDLTRR 178 (491)
T ss_dssp HHHHHHHHHHCBCSTTG
T ss_pred HHHHhHHHHcCcccccc
Confidence 99999999999887643
No 27
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.82 E-value=1.2e-19 Score=150.31 Aligned_cols=146 Identities=11% Similarity=0.081 Sum_probs=119.8
Q ss_pred CcccccccccCCchHHHHHHHHHHhC-CeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc--cccccccCCcce
Q 039415 61 LPLVVYLPFLGRNLHRIVMDLAIVYG-PIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI--TASTLTYRASDT 137 (267)
Q Consensus 61 ~p~~G~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~--~~~~~~~~~~~~ 137 (267)
.|++||+..+..+++.++.+++++|| ||+++.+++.+++++++|++++.++ +. ..|.++.... ....+.+ ..++
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~g-~~~l 84 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-DT-DRFQRQNALPKRVQKSLFG-VNAI 84 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-CT-TTEECTTCSCHHHHTTTTC-TTCG
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-cc-cccccccccccchhhhhcc-ccce
Confidence 38999999987889999999999998 9999999899999999999998554 32 3455443211 1122221 2456
Q ss_pred EeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhcCccCC
Q 039415 138 VFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQG 214 (267)
Q Consensus 138 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG~~~~~ 214 (267)
++.+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. ++++|+.+.+..+++++++.+ ||.+.+.
T Consensus 85 ~~~d-g~~h~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~vi~~~-~G~~~~~ 156 (417)
T 1izo_A 85 QGMD-GSAHIHRKMLFL-SLMTPPHQKRLAELMTEEWKAAVTRWEK--ADEVVLFEEAKEILCRVACYW-AGVPLKE 156 (417)
T ss_dssp GGCC-HHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHTT--SSEEEHHHHHHHHHHHHHHHH-HTCCCCT
T ss_pred eecC-ChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHhc--CCCeeHHHHHHHHHHHHHHHH-cCCCCCc
Confidence 6665 999999999996 9999999999999999999999999976 678999999999999999998 6988764
No 28
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.82 E-value=1.4e-19 Score=149.88 Aligned_cols=149 Identities=11% Similarity=0.046 Sum_probs=118.8
Q ss_pred CCCCCCCcccccccccCCchHHHHHHHHHHh-CCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc--cccccc
Q 039415 55 PPGPRGLPLVVYLPFLGRNLHRIVMDLAIVY-GPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI--TASTLT 131 (267)
Q Consensus 55 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~y-G~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~--~~~~~~ 131 (267)
|||| |++||+..+..+++.++.+++++| |||+++.+++.+.+++++|+.++ ++.++ ..|.+++... ......
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~ 78 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLL 78 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTS
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhcc
Confidence 6666 899999988778999999999999 79999999888999999999986 66543 3566543221 111222
Q ss_pred cCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhcCc
Q 039415 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGT 211 (267)
Q Consensus 132 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG~~ 211 (267)
+ ..+++..+ |+.|+++|++++ ++|+++.++.+.+.+.+.++++++.|.. ++++|+.+.+..+++++++.+ ||.+
T Consensus 79 g-~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~~~~--~~~vdl~~~~~~~~~~vi~~~-~G~~ 152 (415)
T 3awm_A 79 G-QGGVQGLD-GETHRHRKQMFM-GLMTPERVRALAQLFEAEWRRAVPGWTR--KGEIVFYDELHEPLTRAVCAW-AGVP 152 (415)
T ss_dssp C-SSSGGGCC-HHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHH--HSEEEHHHHHHHHHHHHHHHH-HTCC
T ss_pred C-CcceeecC-cHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHhhcc--CCcEeHHHHHHHHHHHHHHHH-cCCC
Confidence 1 24566665 999999999996 9999999999999999999999999976 568999999999999999998 8987
Q ss_pred cCC
Q 039415 212 TQG 214 (267)
Q Consensus 212 ~~~ 214 (267)
.+.
T Consensus 153 ~~~ 155 (415)
T 3awm_A 153 LPD 155 (415)
T ss_dssp CCG
T ss_pred CCc
Confidence 653
No 29
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.81 E-value=1.6e-19 Score=152.97 Aligned_cols=162 Identities=13% Similarity=0.165 Sum_probs=121.8
Q ss_pred cCCCCCCCCCCCCC-CcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCc-
Q 039415 47 VGKGNSQLPPGPRG-LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPT- 124 (267)
Q Consensus 47 ~~~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~- 124 (267)
.+.++.+.||||++ +|++||++.+..+++.++.+++++|||||++++|+.++|+++||+++++++.++...+..++..
T Consensus 12 ~~~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~ 91 (498)
T 3b6h_A 12 RRTRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAI 91 (498)
T ss_dssp -CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHH
T ss_pred HhccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHH
Confidence 44566678999988 8999999988777899999999999999999999999999999999999997654313322211
Q ss_pred ccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc---CCCceeHHHHHHHHHHH
Q 039415 125 ITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK---DSKAIDIGDIAYVTMIN 201 (267)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~~d~~~~~~~~~~~ 201 (267)
....... +.+++..+ |+.| |++.. ++|+.+.++.+.+.+.+.+.+.++..... ....+++...+..++++
T Consensus 92 ~~~~~~~--g~~~~~~~-~~~~---rr~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~ 164 (498)
T 3b6h_A 92 FLMERIF--DVQLPHYS-PSDE---KARMK-LTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLR 164 (498)
T ss_dssp HHHHHTS--CCCCTTCC-HHHH---HHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHH
T ss_pred HHHHHHc--CCCccccC-HHHH---HHHHH-HhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHH
Confidence 1111122 24444443 6655 56664 78998999999888888888877765422 12357899999999999
Q ss_pred HHHHHHhcCccCCC
Q 039415 202 MVSSMLWGGTTQGE 215 (267)
Q Consensus 202 ii~~~~fG~~~~~~ 215 (267)
+++.++||.+++..
T Consensus 165 ~~~~~~fG~~~~~~ 178 (498)
T 3b6h_A 165 AGYLTLYGIEALPR 178 (498)
T ss_dssp HHHHHHHCBSCSSC
T ss_pred HHHHhhcCcccccc
Confidence 99999999988654
No 30
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.81 E-value=2.5e-19 Score=147.91 Aligned_cols=154 Identities=10% Similarity=0.090 Sum_probs=117.9
Q ss_pred CCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeC-CEeEEEecCHHHHHHHHHhcc-cccCCCCCcccccc--
Q 039415 54 LPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG-SKLYIIISSPTLVKEVVRDHD-RKFANRNPTITAST-- 129 (267)
Q Consensus 54 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~vvi~~p~~i~~il~~~~-~~~~~~~~~~~~~~-- 129 (267)
.||||+++|++|++.. +++..+.+++ +||||+++.++ |.+.+++++++.+++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 4899999999999765 7888888885 69999999874 566777899999999997652 22333332211110
Q ss_pred --cccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHHH
Q 039415 130 --LTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSKAIDIGDIAYVTMINMVSS 205 (267)
Q Consensus 130 --~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~~~~~~~~ii~~ 205 (267)
...++.++++.+ |+.|+++||+++ ++|++++++.+.+.+.++++++++.|... +++++|+.+.+...+.++++.
T Consensus 78 ~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~ 155 (404)
T 1jfb_A 78 KQAAKAKPTFVDMD-PPEHMHQRSMVE-PTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIY 155 (404)
T ss_dssp HHHTTSCCCGGGCC-TTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHH
T ss_pred cchhcccCcccccC-chhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHH
Confidence 111224566666 999999999996 99999999999999999999999999764 246799999999999999999
Q ss_pred HHhcCccC
Q 039415 206 MLWGGTTQ 213 (267)
Q Consensus 206 ~~fG~~~~ 213 (267)
.+||.+.+
T Consensus 156 ~~~G~~~~ 163 (404)
T 1jfb_A 156 TLLGVPFN 163 (404)
T ss_dssp HHHTCCGG
T ss_pred HHcCCCHH
Confidence 99998764
No 31
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.80 E-value=4.3e-19 Score=146.51 Aligned_cols=149 Identities=11% Similarity=0.127 Sum_probs=118.7
Q ss_pred CCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEE----e-CC-EeEEEecCHHHHHHHH-HhcccccCCCCC
Q 039415 51 NSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLW----I-GS-KLYIIISSPTLVKEVV-RDHDRKFANRNP 123 (267)
Q Consensus 51 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~----~-~~-~~~vvi~~p~~i~~il-~~~~~~~~~~~~ 123 (267)
+.+.||||+++|+. +..+++..+.++ ++||||++++ + ++ .++|+++||+++++|+ .++ .|.+++.
T Consensus 8 ~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~ 79 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQ 79 (406)
T ss_dssp CCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCC
T ss_pred CCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccccccc
Confidence 35678999999876 456889999999 9999999999 6 78 8999999999999999 543 3555443
Q ss_pred ccc----cc-ccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHH-
Q 039415 124 TIT----AS-TLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYV- 197 (267)
Q Consensus 124 ~~~----~~-~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~- 197 (267)
... .. .... +.++++.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.. .|+++|+.+.+..
T Consensus 80 ~~~~~~~~~~~~~~-~~~l~~~~-g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~ 155 (406)
T 1ued_A 80 FTQSKSGAHVEAQF-VGQISTYD-PPEHTRLRKMLT-PEFTVRRIRRMEPAIQSLIDDRLDLLEA-EGPSADLQGLFADP 155 (406)
T ss_dssp C---------CGGG-TTCGGGCC-TTHHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTEEHHHHTHHH
T ss_pred cccccccccccccc-ccccccCC-CHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHH
Confidence 111 11 1111 24666665 999999999997 9999999999999999999999999975 3568999998875
Q ss_pred HHHHHHHHHHhcCcc
Q 039415 198 TMINMVSSMLWGGTT 212 (267)
Q Consensus 198 ~~~~ii~~~~fG~~~ 212 (267)
+++++++ .+||.+.
T Consensus 156 ~~~~vi~-~~~G~~~ 169 (406)
T 1ued_A 156 VGAHALC-ELLGIPR 169 (406)
T ss_dssp HHHHHHH-HHHTCCH
T ss_pred hHHHHHH-HHcCCCH
Confidence 9999999 5799864
No 32
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.79 E-value=3.1e-19 Score=151.09 Aligned_cols=164 Identities=11% Similarity=0.124 Sum_probs=123.2
Q ss_pred CCCCCCCCCCCCCCccccccccc-----CCchHHHHHHHHHHhCC-eEEEEeCCEeE-------EEecCHHHHHHHHHhc
Q 039415 48 GKGNSQLPPGPRGLPLVVYLPFL-----GRNLHRIVMDLAIVYGP-IYKLWIGSKLY-------IIISSPTLVKEVVRDH 114 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------vvi~~p~~i~~il~~~ 114 (267)
...+.+.||||+++|++|++..+ ..+++.++.+++++||+ ||++++++.++ +++.+++..+.++...
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 45677889999999999998776 57899999999999999 99999988777 6667777665555321
Q ss_pred c----cccCCCCCcccccccccC-CcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCC
Q 039415 115 D----RKFANRNPTITASTLTYR-ASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSK 187 (267)
Q Consensus 115 ~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~ 187 (267)
. ..+....... ....+.. ..+++..+ |+.|+++|++++ +.|+... +.+.+.+.+.++++++.|... +++
T Consensus 103 ~v~k~~~~~~~~~~~-~~l~g~~~~~~~~~~~-g~~h~~~R~~~~-~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~ 178 (495)
T 3dsk_A 103 KVEKKDLLTGTYMPS-TELTGGYRILSYLDPS-EPKHEKLKNLLF-FLLKSSR-NRIFPEFQATYSELFDSLEKELSLKG 178 (495)
T ss_dssp TEECSSCTTSSSCCC-GGGGTTCCCGGGCCTT-SHHHHHHHHHHH-HHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccCCCC-ccccCCCcceeeeCCC-chHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 1 1111111111 1222211 12333344 999999999997 9998755 889999999999999999753 356
Q ss_pred ceeHHHHHHHHHHHHHHHHHhcCccCCC
Q 039415 188 AIDIGDIAYVTMINMVSSMLWGGTTQGE 215 (267)
Q Consensus 188 ~~d~~~~~~~~~~~ii~~~~fG~~~~~~ 215 (267)
++|+.+++..++++++++++||.+.+..
T Consensus 179 ~vdl~~~~~~~~~~~i~~~~~G~~~~~~ 206 (495)
T 3dsk_A 179 KADFGGSSDGTAFNFLARAFYGTNPADT 206 (495)
T ss_dssp SEESHHHHHHHHHHHHHHHHHSCCGGGS
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCcchh
Confidence 8999999999999999999999987654
No 33
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.79 E-value=2e-18 Score=142.71 Aligned_cols=154 Identities=8% Similarity=0.074 Sum_probs=117.7
Q ss_pred CCCCCCCCCcccccccccCCchHHHHHHHHHHh-CCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCCCcccccc-
Q 039415 53 QLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVY-GPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAST- 129 (267)
Q Consensus 53 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~y-G~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~- 129 (267)
..||+|+++|.+.....+..+++..+.++ ++| |||+++++ ++.++++++||+++++|+.++ .|.+++.......
T Consensus 5 ~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~ 81 (412)
T 2zbx_A 5 ATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNFPAT 81 (412)
T ss_dssp ---CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTSCCC
T ss_pred CCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCccccccccc
Confidence 45777877776644445677899999999 788 99999997 888999999999999999754 3444432111111
Q ss_pred ------cccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHH-HHHHHH
Q 039415 130 ------LTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAY-VTMINM 202 (267)
Q Consensus 130 ------~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~i 202 (267)
....+.++++.+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. .++++|+.+.+. .+++++
T Consensus 82 ~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~v 158 (412)
T 2zbx_A 82 SPRFEAVRESPQAFIGLD-PPEHGTRRRMTI-SEFTVKRIKGMRPEVEEVVHGFLDEMLA-AGPTADLVSQFALPVPSMV 158 (412)
T ss_dssp SGGGC----CCCCGGGCC-TTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHH
T ss_pred ccccccccccccccccCC-cHHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHH
Confidence 100124566665 999999999997 9999999999999999999999999975 356899998886 489999
Q ss_pred HHHHHhcCccC
Q 039415 203 VSSMLWGGTTQ 213 (267)
Q Consensus 203 i~~~~fG~~~~ 213 (267)
++. +||.+.+
T Consensus 159 i~~-~~G~~~~ 168 (412)
T 2zbx_A 159 ICR-LLGVPYA 168 (412)
T ss_dssp HHH-HHTCCGG
T ss_pred HHH-HcCCCHH
Confidence 996 7998754
No 34
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.77 E-value=6.6e-18 Score=139.40 Aligned_cols=151 Identities=14% Similarity=0.217 Sum_probs=119.6
Q ss_pred CCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEe-CCEe-EEEecCHHHHHHHHHhcccccCCCCCcccc---
Q 039415 53 QLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWI-GSKL-YIIISSPTLVKEVVRDHDRKFANRNPTITA--- 127 (267)
Q Consensus 53 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~-~vvi~~p~~i~~il~~~~~~~~~~~~~~~~--- 127 (267)
+.+|+|+++|+.++ ...+++.++.+++ +||||+++.+ ++.+ .++++||+++++|+.+ ..|.+++.....
T Consensus 8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVTR 81 (406)
T ss_dssp CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBCB
T ss_pred hhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCccc
Confidence 56778877888766 4468899999985 7999999986 5666 9999999999999975 367776533211
Q ss_pred -cc-cccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHH
Q 039415 128 -ST-LTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVS 204 (267)
Q Consensus 128 -~~-~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~ 204 (267)
.. ....+.++++.+ |+.|+++||+++ ++|++++++.+.+.+.+.++++++.|.. .++++|+.+.+ ..+++++++
T Consensus 82 ~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~ 158 (406)
T 1s1f_A 82 LAPHFIPARGAVGFLD-PPDHTRLRRSVA-AAFTARGVERVRERSRGMLDELVDAMLR-AGPPADLTEAVLSPFPIAVIC 158 (406)
T ss_dssp SSSSCSSCTTSGGGCC-TTHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTHHHHHHHH
T ss_pred ccccccccccccccCC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHhhHhHHHHHH
Confidence 11 211136777776 999999999997 9999999999999999999999999983 25689998766 479999999
Q ss_pred HHHhcCccC
Q 039415 205 SMLWGGTTQ 213 (267)
Q Consensus 205 ~~~fG~~~~ 213 (267)
. +||.+.+
T Consensus 159 ~-~~G~~~~ 166 (406)
T 1s1f_A 159 E-LMGVPAT 166 (406)
T ss_dssp H-HHTCCGG
T ss_pred H-HhCCCHH
Confidence 8 6998765
No 35
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.76 E-value=1.6e-18 Score=145.91 Aligned_cols=157 Identities=10% Similarity=0.104 Sum_probs=118.4
Q ss_pred cCCCCCCCCCCCCC-CcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCc-
Q 039415 47 VGKGNSQLPPGPRG-LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPT- 124 (267)
Q Consensus 47 ~~~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~- 124 (267)
.++++.+.||||++ +|++||+..+..+++.++.+++++|||||++++|+.++++++||+.+++++.++.. +..++..
T Consensus 12 ~~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~ 90 (475)
T 3b98_A 12 RRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQ 90 (475)
T ss_dssp -CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHH
T ss_pred hcccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHH
Confidence 34556678999998 99999999887789999999999999999999999999999999999999975531 3322211
Q ss_pred ccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcC----CCceeHHHHHHHHHH
Q 039415 125 ITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKD----SKAIDIGDIAYVTMI 200 (267)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~----~~~~d~~~~~~~~~~ 200 (267)
....... +.+++..+ |+. +|+++. ++|++++++.+.+.+.++++++++.+.... ...+|+...+..+++
T Consensus 91 ~~~~~~~--g~~~~~~~-~~~---~R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (475)
T 3b98_A 91 VLMKRIF--NMILPSHN-PES---EKKRAE-MHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLF 163 (475)
T ss_dssp HHHHHTT--CCCCTTCC-HHH---HHHHHH-HHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHH
T ss_pred HHHHHHh--CCCCCCCC-hHH---HHHHHH-HHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHH
Confidence 1111122 24444444 554 467885 899999999999999999999888765421 124688888888888
Q ss_pred HHHHHHHhcCc
Q 039415 201 NMVSSMLWGGT 211 (267)
Q Consensus 201 ~ii~~~~fG~~ 211 (267)
++++...||.+
T Consensus 164 ~~~~~~~~g~~ 174 (475)
T 3b98_A 164 KTGYLTVFGAE 174 (475)
T ss_dssp HHHHHHHHCCT
T ss_pred HHhhhheeCCc
Confidence 88888888854
No 36
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.76 E-value=6e-18 Score=139.95 Aligned_cols=156 Identities=13% Similarity=0.057 Sum_probs=119.0
Q ss_pred CCCCCCCCCCCCCCccc--ccccc-----cCCchHHHHHHHHHHhC--CeEEEEeCCEeEEEecCHHHHHHHHHhccccc
Q 039415 48 GKGNSQLPPGPRGLPLV--VYLPF-----LGRNLHRIVMDLAIVYG--PIYKLWIGSKLYIIISSPTLVKEVVRDHDRKF 118 (267)
Q Consensus 48 ~~~~~~~~pgp~~~p~~--G~~~~-----~~~~~~~~~~~~~~~yG--~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~ 118 (267)
...+.++||||++.|.. +.+-. +..+++.++.+++ +|| ||+++...+ +.++++||+++++|+.+ ...|
T Consensus 6 ~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f 82 (415)
T 2zwu_A 6 IQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHF 82 (415)
T ss_dssp -----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTE
T ss_pred ccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-cccc
Confidence 35677889999988864 43222 2347888999995 799 999998333 68999999999999964 4468
Q ss_pred CCCC-CcccccccccCCcc-eEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-
Q 039415 119 ANRN-PTITASTLTYRASD-TVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA- 195 (267)
Q Consensus 119 ~~~~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~- 195 (267)
.+++ ......... +.+ +++.+ |+.|+++|++++ ++|++++++.+.+.+.++++++++.|.. ++++|+.+.+
T Consensus 83 ~~~~~~~~~~~~~~--~~~~l~~~~-g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~ 156 (415)
T 2zwu_A 83 SSECPFIPREAGEA--YDFIPTSMD-PPEQRQFRALAN-QVVGMPVVDKLENRIQELACSLIESLRP--QGQCNFTEDYA 156 (415)
T ss_dssp ETTSCSSSHHHHHH--CCCTTTTCC-TTTTHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHGG--GTEEEHHHHTT
T ss_pred CCCcccCCCCcccc--ccccCccCC-CcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHH
Confidence 7775 222111111 245 66665 999999999996 9999999999999999999999999986 3489999765
Q ss_pred HHHHHHHHHHHHhcCccC
Q 039415 196 YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 196 ~~~~~~ii~~~~fG~~~~ 213 (267)
..+++++++.+ ||.+.+
T Consensus 157 ~~~~~~vi~~~-~G~~~~ 173 (415)
T 2zwu_A 157 EPFPIRIFMLL-AGLPEE 173 (415)
T ss_dssp THHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHHHHH-cCCCHH
Confidence 78999999999 998765
No 37
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.76 E-value=2.5e-18 Score=142.91 Aligned_cols=153 Identities=11% Similarity=0.060 Sum_probs=119.5
Q ss_pred CCCCCCCCCCCCcccccccccC-----CchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCCC
Q 039415 50 GNSQLPPGPRGLPLVVYLPFLG-----RNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRNP 123 (267)
Q Consensus 50 ~~~~~~pgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~~ 123 (267)
.++++||| ++|++.... .+++..+.++++ ||||++++. |+.+++++++++.++++++++ ..|++++.
T Consensus 3 ~~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~ 75 (428)
T 1cpt_A 3 ARATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEG 75 (428)
T ss_dssp TTCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSS
T ss_pred cccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccc
Confidence 35567777 788765542 467888988876 799999998 678999999999999999754 46777664
Q ss_pred -cccc---c-c-c---cc----CCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCcee
Q 039415 124 -TITA---S-T-L---TY----RASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAID 190 (267)
Q Consensus 124 -~~~~---~-~-~---~~----~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d 190 (267)
.... . . + .+ .+.++++.+ |+.|+++||+++ ++|++++++.+.+.+.++++++++.|.. .++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d 152 (428)
T 1cpt_A 76 SEILYDQNNEAFMRSISGGCPHVIDSLTSMD-PPTHTAYRGLTL-NWFQPASIRKLEENIRRIAQASVQRLLD-FDGECD 152 (428)
T ss_dssp CSSCCCHHHHHHHHHHTTTSSCSSCCGGGCC-TTHHHHHHHHHH-TTSSHHHHGGGHHHHHHHHHHHHHHHHT-SSSEEE
T ss_pred cccCCcccccchhccccccccccccccccCC-hHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHH-hCCCee
Confidence 2211 1 1 1 21 124666666 999999999996 9999999999999999999999999986 236899
Q ss_pred HHHHH-HHHHHHHHHHHHhcCccC
Q 039415 191 IGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 191 ~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+.+.+ ..+++|+|+.+ ||.+.+
T Consensus 153 ~~~~~~~~~~~~vi~~~-fG~~~~ 175 (428)
T 1cpt_A 153 FMTDCALYYPLHVVMTA-LGVPED 175 (428)
T ss_dssp HHHHTTTTHHHHHHHHH-HTCCGG
T ss_pred hHHHHHhhhHHHHHHHH-cCCCHh
Confidence 98554 67999999999 998765
No 38
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.74 E-value=1.5e-17 Score=139.94 Aligned_cols=163 Identities=8% Similarity=0.092 Sum_probs=119.6
Q ss_pred CCCCCCCCCCCCCccccccccc-----CC-chHHHHHHHHHHhCC-eEEEEeCC-------EeEEEecCHHHHHHHHHh-
Q 039415 49 KGNSQLPPGPRGLPLVVYLPFL-----GR-NLHRIVMDLAIVYGP-IYKLWIGS-------KLYIIISSPTLVKEVVRD- 113 (267)
Q Consensus 49 ~~~~~~~pgp~~~p~~G~~~~~-----~~-~~~~~~~~~~~~yG~-i~~~~~~~-------~~~vvi~~p~~i~~il~~- 113 (267)
..+.+.||||.++|++|++..+ .. +++.++.+++++||+ ||++++++ ...|++.+++..+.++..
T Consensus 5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~ 84 (473)
T 3dan_A 5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS 84 (473)
T ss_dssp GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence 4567889999999999998875 45 789999999999999 99999863 345555666554444421
Q ss_pred ---cccccCCCCCcccccccccC-CcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc--CCC
Q 039415 114 ---HDRKFANRNPTITASTLTYR-ASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK--DSK 187 (267)
Q Consensus 114 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~ 187 (267)
+...+..... ......++. ..+++..+ |+.|+++|++++ ++|++ .++.+.+.+.+.++++++.|... +++
T Consensus 85 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~-~~~h~~~R~~~~-~~f~~-~~~~~~~~i~~~~~~ll~~~~~~~~~~~ 160 (473)
T 3dan_A 85 KVEKKDLFTGTYM-PSTKLTGGYRVLSYLDPS-EPRHAQLKNLLF-FMLKN-SSNRVIPQFETTYTELFEGLEAELAKNG 160 (473)
T ss_dssp TEECSSCTTSSSC-CCGGGGTTSCCGGGCCTT-SHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ceecccccccccc-CCccccCCCcceeeeCCC-cHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 1111111111 111112211 12334444 999999999996 99998 58999999999999999999753 246
Q ss_pred ceeHHHHHHHHHHHHHHHHHhcCccCCC
Q 039415 188 AIDIGDIAYVTMINMVSSMLWGGTTQGE 215 (267)
Q Consensus 188 ~~d~~~~~~~~~~~ii~~~~fG~~~~~~ 215 (267)
++|+.+++..++++++++++||.+.+..
T Consensus 161 ~vdl~~~~~~~~~~~i~~~~~G~~~~~~ 188 (473)
T 3dan_A 161 KAAFNDVGEQAAFRFLGRAYFNSNPEET 188 (473)
T ss_dssp CEECHHHHHHHHHHHHHHHHHSCCGGGS
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCch
Confidence 8999999999999999999999988763
No 39
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.74 E-value=1.7e-17 Score=138.04 Aligned_cols=153 Identities=14% Similarity=0.110 Sum_probs=119.3
Q ss_pred CCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEE--------eCCEeEEEecCHHHHHHHHHhcccccCCCCC
Q 039415 52 SQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLW--------IGSKLYIIISSPTLVKEVVRDHDRKFANRNP 123 (267)
Q Consensus 52 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~--------~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~ 123 (267)
...||.|.+++++........+++.++.++ ++||||+++. +|+.+++++++|+++++|+.++ ..|++++.
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~ 94 (433)
T 3ivy_A 17 VPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYEN 94 (433)
T ss_dssp ---CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTT
T ss_pred cCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcc
Confidence 345677777776655443356799999999 7899999998 4457899999999999999654 56777654
Q ss_pred ccccc--------ccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH
Q 039415 124 TITAS--------TLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA 195 (267)
Q Consensus 124 ~~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~ 195 (267)
..... .....+.++++.+ |+.|+++|++++ ++|+++.++.+.+.+.+.++++++.|.. ++++|+.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~ 170 (433)
T 3ivy_A 95 GVIPRFKNDIAREDIEVQRFVMLNMD-APHHTRLRKIIS-RGFTPRAVGRLHDELQERAQKIAAEAAA--AGSGDFVEQV 170 (433)
T ss_dssp CSCCCCCTTCCHHHHHGGGGSGGGCC-TTHHHHHHHHHG-GGSCHHHHHTTHHHHHHHHHHHHHHHHH--HCEEEHHHHT
T ss_pred cccccccccccccccccccCCccccC-hHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh--CCCeeHHHHH
Confidence 33221 1112235666666 999999999996 9999999999999999999999999976 5689998887
Q ss_pred -HHHHHHHHHHHHhcCc
Q 039415 196 -YVTMINMVSSMLWGGT 211 (267)
Q Consensus 196 -~~~~~~ii~~~~fG~~ 211 (267)
..+++++++.+ ||.+
T Consensus 171 ~~~~~~~vi~~l-~G~~ 186 (433)
T 3ivy_A 171 SCELPLQAIAGL-LGVP 186 (433)
T ss_dssp TSHHHHHHHHHH-HTCC
T ss_pred HHHHHHHHHHHH-cCCC
Confidence 99999999996 9964
No 40
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.74 E-value=2.8e-17 Score=134.73 Aligned_cols=139 Identities=9% Similarity=0.092 Sum_probs=110.3
Q ss_pred cCCchHHHHHHHHHHhCCeEEEEeCC----EeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccCCcc
Q 039415 70 LGRNLHRIVMDLAIVYGPIYKLWIGS----KLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSK 145 (267)
Q Consensus 70 ~~~~~~~~~~~~~~~yG~i~~~~~~~----~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 145 (267)
+..+++.++.++ ++||||+++++++ .++++++||+++++|+. +...|.+++...........+.+++..+ |+.
T Consensus 10 ~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~ 86 (384)
T 3oo3_A 10 LRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADRALLPGILQAYD-PPD 86 (384)
T ss_dssp ETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-----CCCTTCGGGCC-TTH
T ss_pred cccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCccccccccccccccccccCC-Chh
Confidence 357889999999 5999999999876 89999999999999994 4467888765432221111223444545 999
Q ss_pred hHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhcCccC
Q 039415 146 WQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 146 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG~~~~ 213 (267)
|+++|++++ ++|++++++.+.+.+.+.++++++.|.. .++++|+.+.+...+.++++..+||.+.+
T Consensus 87 ~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~v~~~~~G~~~~ 152 (384)
T 3oo3_A 87 HTRLRRTVA-PAYSARRMERLRPRIEEIVEECLDDFES-VGAPVDFVRHAAWPIPAYIACEFLGVPRD 152 (384)
T ss_dssp HHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-SCSSEEHHHHTTTHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHcCCCHH
Confidence 999999996 9999999999999999999999999976 46789999999888777777788998765
No 41
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.73 E-value=3.5e-17 Score=135.18 Aligned_cols=139 Identities=7% Similarity=0.020 Sum_probs=109.1
Q ss_pred cccCCchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCCCcccccc---ccc----CCcceEe
Q 039415 68 PFLGRNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAST---LTY----RASDTVF 139 (267)
Q Consensus 68 ~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~ 139 (267)
..+..+++..+.++ ++||||+++++ ++.++|+++||+++++|+.++ .|.+++....... ... .+.++++
T Consensus 20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (408)
T 3abb_A 20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIG 96 (408)
T ss_dssp CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTT
T ss_pred cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCcccccccccccc
Confidence 34567889999999 89999999997 788999999999999999754 3444432111100 110 1235666
Q ss_pred ccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHH-HHHHHHHHHHHhcCccC
Q 039415 140 ASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAY-VTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 140 ~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~ii~~~~fG~~~~ 213 (267)
.+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. .++++|+.+.+. .+++++++. +||.+.+
T Consensus 97 ~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 167 (408)
T 3abb_A 97 VD-DPVHARQRRMLI-PSFGVKRMNAIRPRLQSLVDRLLDDMLA-KGPGADLVSAFALPVPSVAICE-LLGVPYG 167 (408)
T ss_dssp CC-TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred CC-chHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHH-HhCCCHH
Confidence 65 999999999997 9999999999999999999999999985 356899998876 589999997 7998754
No 42
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.72 E-value=2.1e-17 Score=136.60 Aligned_cols=150 Identities=13% Similarity=0.174 Sum_probs=112.3
Q ss_pred HHhhcCCCCCCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCC
Q 039415 43 FFMKVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRN 122 (267)
Q Consensus 43 ~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~ 122 (267)
.++++..++.+.+|||+. ..+++.++.++++ |||| +.++.+.++++||+.+++++.++ ..|++++
T Consensus 9 ~iyr~~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~ 73 (411)
T 2jjn_A 9 CCARRTLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDP 73 (411)
T ss_dssp --------CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCG
T ss_pred HhhhcccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcc
Confidence 345567888888999872 1467889999976 9998 56667899999999999999764 3677765
Q ss_pred CcccccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHH
Q 039415 123 PTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMIN 201 (267)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ 201 (267)
.... ......+.++++.+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++. . ++++|+.+.+ ..+++|
T Consensus 74 ~~~~-~~~~~~~~~~~~~~-g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~--~--~~~~d~~~~~~~~~~~~ 146 (411)
T 2jjn_A 74 TRVI-EGASPTPGMIHEID-PPEHRALRKVVS-SAFTPRTISDLEPRIRDVTRSLLAD--A--GESFDLVDVLAFPLPVT 146 (411)
T ss_dssp GGGS-TTCCCCTTCGGGCC-TTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHT--S--CSEEEHHHHTTTHHHHH
T ss_pred cccC-CcccccccccccCC-chHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHhc--C--CCceeHHHHHHHHHHHH
Confidence 3221 11111235666665 999999999996 9999999999999999999999998 3 4689998554 689999
Q ss_pred HHHHHHhcCccCCC
Q 039415 202 MVSSMLWGGTTQGE 215 (267)
Q Consensus 202 ii~~~~fG~~~~~~ 215 (267)
+++.+ ||.+.+..
T Consensus 147 vi~~~-fG~~~~~~ 159 (411)
T 2jjn_A 147 IVAEL-LGLPPMDH 159 (411)
T ss_dssp HHHHH-HTCCSCCC
T ss_pred HHHHH-cCCCHHHH
Confidence 99998 99987643
No 43
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.72 E-value=1.1e-16 Score=131.92 Aligned_cols=137 Identities=12% Similarity=0.129 Sum_probs=110.1
Q ss_pred ccCCchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCCC--c-cc---ccccccCCcceEecc
Q 039415 69 FLGRNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRNP--T-IT---ASTLTYRASDTVFAS 141 (267)
Q Consensus 69 ~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~~--~-~~---~~~~~~~~~~~~~~~ 141 (267)
.+..+++..+.++ ++||||+++++ ++.++++++||+++++|+.++ .|.+++. . .. ..... .+.++++.+
T Consensus 16 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 91 (403)
T 3aba_A 16 SCPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKP-GRGSLLWQD 91 (403)
T ss_dssp SSTTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCC-CTTCCTTCC
T ss_pred ccccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccc-cccccccCC
Confidence 3456788889999 89999999997 889999999999999999764 4766632 1 11 11111 135666665
Q ss_pred CCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 142 YGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 142 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
|+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. .++++|+...+ ..+++++++. +||.+.+
T Consensus 92 -g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 160 (403)
T 3aba_A 92 -EPEHTSDRKLLA-KEFTVRRMQALRPNIQRIVDEHLDAIEA-RGGPVDLVKTFANAVPSMVISD-LFGVPVE 160 (403)
T ss_dssp -TTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred -chhHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 999999999997 9999999999999999999999999983 26789998766 4799999998 7998764
No 44
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.71 E-value=1.5e-16 Score=131.44 Aligned_cols=136 Identities=11% Similarity=0.123 Sum_probs=110.3
Q ss_pred cCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccc-----cccccCCcceEeccCCc
Q 039415 70 LGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA-----STLTYRASDTVFASYGS 144 (267)
Q Consensus 70 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~ 144 (267)
+..+++.++.++ ++||||+++++++.+.++++||+++++++.++ .|++++..... ......+.++++.+ |+
T Consensus 18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 93 (411)
T 3a4g_A 18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDP--RLSKDWRHTLPEDQRADMPATPTPMMILMD-PP 93 (411)
T ss_dssp GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT--TEESCGGGGSCGGGCTTCCSCSSCCGGGCC-TT
T ss_pred hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC--CcccccccccccccccccCcccccccccCC-ch
Confidence 456889999999 89999999999999999999999999999765 37776532210 11111235666665 99
Q ss_pred chHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 145 KWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 145 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
.|+++||+++ ++|++++++.+.+.+.+.++++++.|.. ++++|+...+ ..+++++++.+ ||.+.+
T Consensus 94 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~~vi~~~-~G~~~~ 159 (411)
T 3a4g_A 94 DHTRLRKLVG-RSFTVRRMNELEPRITEIADGLLAGLPT--DGPVDLMREYAFQIPVQVICEL-LGVPAE 159 (411)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHSCS--SSCEEHHHHTTTTHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHHH-hCCCHH
Confidence 9999999996 9999999999999999999999999975 4689997554 68999999975 998765
No 45
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.70 E-value=2.6e-16 Score=130.31 Aligned_cols=140 Identities=8% Similarity=0.073 Sum_probs=113.1
Q ss_pred ccCCchHHHHHHHHHHhCCeEEEEeC-CEeEEEecCHHHHHHHHHhcccccCCCCCc---ccccc-c---ccCCcceEec
Q 039415 69 FLGRNLHRIVMDLAIVYGPIYKLWIG-SKLYIIISSPTLVKEVVRDHDRKFANRNPT---ITAST-L---TYRASDTVFA 140 (267)
Q Consensus 69 ~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~vvi~~p~~i~~il~~~~~~~~~~~~~---~~~~~-~---~~~~~~~~~~ 140 (267)
.+..+++.++.+++++ |||++++++ |.++++++||+++++|+.++ .|.+++.. ..... . ...+.++++.
T Consensus 26 ~~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 102 (417)
T 3tyw_A 26 GCPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRT 102 (417)
T ss_dssp SSTTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGC
T ss_pred ccccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhc
Confidence 3467899999999887 999999986 58999999999999999765 57664321 11111 1 0123567776
Q ss_pred cCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccCCC
Q 039415 141 SYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQGE 215 (267)
Q Consensus 141 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~~~ 215 (267)
+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. +|+++|+.+.+ ..+++++++.+ ||.+.+..
T Consensus 103 d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~ 174 (417)
T 3tyw_A 103 D-APEHTRYRRMLL-PAFTVRRVRAMRPAVQARVDEILDGMLA-AGGPVDLVSAYANAVSTSVICEL-LGIPRHDL 174 (417)
T ss_dssp C-HHHHHHHHHHHG-GGGCHHHHHHTHHHHHHHHHHHHHHHHH-HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT
T ss_pred C-CcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH
Confidence 6 999999999997 9999999999999999999999999986 46679999987 57899999997 99887643
No 46
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.70 E-value=8.3e-17 Score=132.91 Aligned_cols=139 Identities=17% Similarity=0.174 Sum_probs=109.7
Q ss_pred ccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC--ccc---cc---cccc--CCcceE
Q 039415 69 FLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP--TIT---AS---TLTY--RASDTV 138 (267)
Q Consensus 69 ~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~--~~~---~~---~~~~--~~~~~~ 138 (267)
.+..+++..+.++ ++||||+++++++.++|+++||+++++|+.++. +.+++. ... .. .+.. .+.+++
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF 88 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc
Confidence 4557899999999 999999999998899999999999999997542 444321 110 00 0000 124666
Q ss_pred eccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHH-HHHHHHHHHHHhcCccC
Q 039415 139 FASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-DSKAIDIGDIAY-VTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 139 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~d~~~~~~-~~~~~ii~~~~fG~~~~ 213 (267)
+.+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.+. +++++|+.+.+. .+++|+++. +||.+.+
T Consensus 89 ~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 162 (408)
T 1odo_A 89 TAY-GPNHRKLRRLVA-PAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQD 162 (408)
T ss_dssp GCC-HHHHHHHHHTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHH
T ss_pred ccC-ChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHH
Confidence 665 999999999997 99999999999999999999999999753 367899998887 599999996 7998653
No 47
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.69 E-value=2.1e-16 Score=130.29 Aligned_cols=137 Identities=13% Similarity=0.109 Sum_probs=111.5
Q ss_pred cCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCc--c----ccc---cc-cc----CCc
Q 039415 70 LGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPT--I----TAS---TL-TY----RAS 135 (267)
Q Consensus 70 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~--~----~~~---~~-~~----~~~ 135 (267)
+..+++.++.++ ++||||+++++++.+.++++||+++++|+.++ .|.+++.. . ... .+ .. .+.
T Consensus 12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (404)
T 1z8o_A 12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT 88 (404)
T ss_dssp GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence 456889999999 99999999999999999999999999999765 57776532 1 110 11 00 135
Q ss_pred ceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccCC
Q 039415 136 DTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQG 214 (267)
Q Consensus 136 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~~ 214 (267)
++++.+ |+.|+++|++++ ++|+++.++.+.+.+.+.++++++.|.. ++++|+.+.+ ..+++++++.+ ||.+.+.
T Consensus 89 ~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~ 163 (404)
T 1z8o_A 89 NMGTSD-PPTHTRLRKLVS-QEFTVRRVEAMRPRVEQITAELLDEVGD--SGVVDIVDRFAHPLPIKVICEL-LGVDEKY 163 (404)
T ss_dssp SGGGCC-TTHHHHHHHHHH-TTSCHHHHHHTHHHHHHHHHHHHHTSCS--SSEEEHHHHTTTHHHHHHHHHH-TTCCGGG
T ss_pred ccccCC-CcHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCcchHHHHhHHHHHHHHHHH-hCCCHHH
Confidence 676665 999999999996 9999999999999999999999999975 6789998765 68999999984 9987653
No 48
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.69 E-value=1.7e-16 Score=132.06 Aligned_cols=137 Identities=12% Similarity=0.049 Sum_probs=110.3
Q ss_pred CchHHHHHHHHHHhCCeEEEEeC-------CEeEEEecCHHHHHHHHHhcccccCCCCCc--c-cccccccCCcceEecc
Q 039415 72 RNLHRIVMDLAIVYGPIYKLWIG-------SKLYIIISSPTLVKEVVRDHDRKFANRNPT--I-TASTLTYRASDTVFAS 141 (267)
Q Consensus 72 ~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvi~~p~~i~~il~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 141 (267)
.+++.++.+++ +||||+++.++ +.++|+++||+++++|+.++ ..|.+++.. . ....+...+.++++.+
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d 121 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD 121 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC
Confidence 46788899995 69999999886 66899999999999999865 468777531 1 1111111135677776
Q ss_pred CCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 142 YGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-DSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 142 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
|+.|+++|++++ ++|++++++.+.+.+.+.++++++.|... +++++|+.+.+ ..+++++++.+ ||.+.+
T Consensus 122 -g~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~ 192 (435)
T 2wm5_A 122 -DPRHQRLRSIVS-RAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKA 192 (435)
T ss_dssp -TTHHHHHHHHHH-HTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred -cHHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHH
Confidence 999999999996 99999999999999999999999999764 23489998766 78999999999 998765
No 49
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.69 E-value=6.3e-16 Score=127.39 Aligned_cols=136 Identities=11% Similarity=0.155 Sum_probs=109.9
Q ss_pred cCCchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCCCccc-ccccccCCcc--eEeccCC--
Q 039415 70 LGRNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT-ASTLTYRASD--TVFASYG-- 143 (267)
Q Consensus 70 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~g-- 143 (267)
+..+++.++.++ ++||||+++++ ++.+.++++||+++++|+.++ .|.+++.... ...... +.+ +++.+ |
T Consensus 24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~-~~~~~l~~~~-g~~ 98 (404)
T 2xbk_A 24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVR-SPFLDLLISD-ADA 98 (404)
T ss_dssp BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSC-CHHHHTTCBC-SCH
T ss_pred cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccc-cccccceeeC-CCC
Confidence 446788999999 89999999997 789999999999999999764 4666554321 111112 245 66665 9
Q ss_pred ----cchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 144 ----SKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 144 ----~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. +|+++|+.+.+ ..+++++++. +||.+.+
T Consensus 99 ~~~~~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 170 (404)
T 2xbk_A 99 ESGRRQHAETRRLLT-PLFSARRVLEMQPKVEEAADTLLDAFIA-QGPPGDLHGELTVPFALTVLCE-VIGVPPQ 170 (404)
T ss_dssp HHHHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-TCSSEEHHHHTHHHHHHHHHHH-HHTCCGG
T ss_pred CCCCchHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHHHHHHHHH-HhCCCHH
Confidence 99999999997 9999999999999999999999999976 35689998766 5699999997 7998754
No 50
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.69 E-value=2.6e-16 Score=129.82 Aligned_cols=135 Identities=11% Similarity=0.129 Sum_probs=109.6
Q ss_pred cCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccc------cccccCCcceEeccCC
Q 039415 70 LGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA------STLTYRASDTVFASYG 143 (267)
Q Consensus 70 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g 143 (267)
+..+++.++.++ ++||||+++++++.+++++++|+.+++++.++ ..|.+++..... .... +.++++.+ |
T Consensus 11 ~~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~-g 85 (404)
T 3ejb_B 11 FLKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQ--NQMMLFQN-Q 85 (404)
T ss_dssp HHHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHH--HTSGGGCC-T
T ss_pred cccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhh--hcchhhcC-C
Confidence 346788899888 58999999999999999999999999999866 567766532211 1112 35676666 9
Q ss_pred cchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 144 SKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 144 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+.|+++||+++ ++|++++++.+.+.+.+.++++++.|.. ++.+|+...+ ..+++++++.+ ||.+.+
T Consensus 86 ~~h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~ 152 (404)
T 3ejb_B 86 PDHRRLRTLAS-GAFTPRTTESYQPYIIETVHHLLDQVQG--KKKMEVISDFAFPLASFVIANI-IGVPEE 152 (404)
T ss_dssp THHHHHHHHHH-GGGSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTHHHHHHHHHHHH-HTCCGG
T ss_pred chHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCcchHHHHHHHHHHHHHHHH-cCCCHH
Confidence 99999999996 9999999999999999999999999976 6789986555 56899999984 897654
No 51
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.69 E-value=2.3e-16 Score=130.53 Aligned_cols=135 Identities=12% Similarity=0.139 Sum_probs=109.6
Q ss_pred cCCchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCCCc-cc---ccccccCCcceEeccCCc
Q 039415 70 LGRNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRNPT-IT---ASTLTYRASDTVFASYGS 144 (267)
Q Consensus 70 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~g~ 144 (267)
+..+++.++.++ ++||||+++++ ++.+.++++||+++++|+.++ .|.+++.. .. ..... .+.++++.+ |+
T Consensus 35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~-~~~~l~~~d-g~ 109 (417)
T 2y5n_A 35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEM-VKGGLLSMD-PP 109 (417)
T ss_dssp SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSC-CCCSGGGCC-TT
T ss_pred hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCccc-ccccCccCC-ch
Confidence 456889999999 89999999997 788999999999999999754 46665432 11 11111 135676665 99
Q ss_pred chHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCC-ceeHHHHHH-HHHHHHHHHHHhcCccC
Q 039415 145 KWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSK-AIDIGDIAY-VTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 145 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~d~~~~~~-~~~~~ii~~~~fG~~~~ 213 (267)
.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. ++ ++|+.+.+. .+++++++. +||.+.+
T Consensus 110 ~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~ 176 (417)
T 2y5n_A 110 EHSRLRRLVV-KAFTARRAESLRPRAREIAHELVDQMAA--TGQPADLVAMFARQLPVRVICE-LLGVPSA 176 (417)
T ss_dssp HHHHHHHHHH-HHSCHHHHHHTHHHHHHHHHHHHHHHHH--HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG
T ss_pred HHHHHHHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--CCCCeeHHHHHHHHhHHHHHHH-HcCCCHH
Confidence 9999999997 9999999999999999999999999986 45 899987764 699999998 6998754
No 52
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.68 E-value=9.3e-17 Score=132.21 Aligned_cols=138 Identities=13% Similarity=0.018 Sum_probs=108.8
Q ss_pred ccCCchHHHHHHHHHHh--CCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccCCcch
Q 039415 69 FLGRNLHRIVMDLAIVY--GPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKW 146 (267)
Q Consensus 69 ~~~~~~~~~~~~~~~~y--G~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 146 (267)
.+..+++.++.+++++| |||+++.+++ +.++++||+.+++|+. +.+.|.+++..........++.++++.+ |+.|
T Consensus 16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~ 92 (398)
T 4fb2_A 16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYETGEFELMMAGQD-DPVH 92 (398)
T ss_dssp CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC----CCCTTTTCC-TTHH
T ss_pred hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCCcccccCcccCC-chHH
Confidence 34578999999999999 9999999876 5899999999999994 4457777664433211122223444554 9999
Q ss_pred HHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 147 QILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 147 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+++|++++ ++|++++++.+.+.+.+.++++++.|.. ++.+|+...+ ..+++++++. +||.+.+
T Consensus 93 ~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 156 (398)
T 4fb2_A 93 KKYRQLVA-KPFSPEATDLFTEQLRQSTNDLIDARIE--LGEGDAATWLANEIPARLTAI-LLGLPPE 156 (398)
T ss_dssp HHHHHHHH-TTTCHHHHHTTHHHHHHHHHHHHHTTTT--TTEEEHCCCCCTTHHHHHHHH-HTTSCGG
T ss_pred HHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 99999996 9999999999999999999999999976 4578975554 6899999999 7997654
No 53
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.67 E-value=6.7e-16 Score=127.62 Aligned_cols=152 Identities=13% Similarity=0.098 Sum_probs=114.0
Q ss_pred CCCCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCCCcccc---
Q 039415 52 SQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA--- 127 (267)
Q Consensus 52 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~--- 127 (267)
....+||.. |+- ..+..+++.++.+++ +||||+++++ |+.++++++||+++++++.++ .|.+++.....
T Consensus 6 ~~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~ 78 (413)
T 2z36_A 6 ADELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLF 78 (413)
T ss_dssp ----CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCS
T ss_pred HHHhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccc
Confidence 344556542 332 234568899999997 7899999997 788999999999999999763 57666432111
Q ss_pred ---ccccc---CCcc-eEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHH-HHH
Q 039415 128 ---STLTY---RASD-TVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAY-VTM 199 (267)
Q Consensus 128 ---~~~~~---~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~ 199 (267)
..... ++.+ +++.+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|...+++++|+.+.+. .++
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~ 156 (413)
T 2z36_A 79 TLDAATLQQLRSQPPLMLGMD-GAEHSAARRPVI-GEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVP 156 (413)
T ss_dssp SCCHHHHHHHTTSCCCGGGCC-HHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHH
T ss_pred ccccccccccccccccccccC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhH
Confidence 11110 1356 66665 999999999997 99999999999999999999999999742257899987665 699
Q ss_pred HHHHHHHHhcCccC
Q 039415 200 INMVSSMLWGGTTQ 213 (267)
Q Consensus 200 ~~ii~~~~fG~~~~ 213 (267)
+++++.+ ||.+.+
T Consensus 157 ~~vi~~~-~G~~~~ 169 (413)
T 2z36_A 157 SLVICEL-LGVPYT 169 (413)
T ss_dssp HHHHHHH-HTCCGG
T ss_pred HHHHHHH-hCCCHH
Confidence 9999995 998754
No 54
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.67 E-value=3.3e-16 Score=130.87 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHhCCeE--EEE-eCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccc-------------cCCcce
Q 039415 74 LHRIVMDLAIVYGPIY--KLW-IGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT-------------YRASDT 137 (267)
Q Consensus 74 ~~~~~~~~~~~yG~i~--~~~-~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 137 (267)
++..+.++ ++||||+ ++. +++.++++++++++++++++++ ..|++++......... ..+.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 78888888 6799999 887 7778999999999999999765 5787766433211100 012356
Q ss_pred EeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 138 VFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 138 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+..+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. .++++|+.+.+ ..+++++|+.+ ||.+.+
T Consensus 125 ~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~-~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~ 197 (450)
T 3tkt_A 125 VQMD-APKHPKLRRLTQ-DWFMPKNLARLDGEIRKIANEAIDRMLG-AGEEGDFMALVAAPYPLHVVMQI-LGVPPE 197 (450)
T ss_dssp GGCC-TTHHHHHHHHHH-TTTSHHHHGGGHHHHHHHHHHHHHHHHH-TCSEEEHHHHTTTHHHHHHHHHH-TTCCGG
T ss_pred ccCC-CHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEeeHHHHHHHHHHHHHHHH-cCCChh
Confidence 6665 999999999996 9999999999999999999999999986 36789998887 68999999985 997643
No 55
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.65 E-value=8.2e-16 Score=127.06 Aligned_cols=138 Identities=13% Similarity=0.140 Sum_probs=108.5
Q ss_pred ccCCchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCC-Cccccc--cccc--------C-Cc
Q 039415 69 FLGRNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRN-PTITAS--TLTY--------R-AS 135 (267)
Q Consensus 69 ~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~-~~~~~~--~~~~--------~-~~ 135 (267)
.+..+++..+.++ ++||||+++++ ++.++|+++||+++++|+.++. +.+++ ...... .... . +.
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR 90 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence 4456889999999 99999999997 8899999999999999997553 44433 111000 0000 1 24
Q ss_pred ceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHH-HHHHHHHHHHHhcCccC
Q 039415 136 DTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAY-VTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 136 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~ii~~~~fG~~~~ 213 (267)
++++.+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. +++++|+.+.+. .+++++++. +||.+.+
T Consensus 91 ~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 165 (411)
T 1gwi_A 91 SMLTVD-GAEHRRLRTLVA-QALTVRRVEHMRGRITELTDRLLDELPA-DGGVVDLKAAFAYPLPMYVVAD-LMGIEEA 165 (411)
T ss_dssp SGGGCC-HHHHHHHHHHHT-TTSCHHHHHTTHHHHHHHHHHHHHTSCC-SCCCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred ccccCC-cHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcchHHHHhhHHHHHHHHH-HhCCCHH
Confidence 666665 999999999997 9999999999999999999999999973 367899998876 599999996 7998754
No 56
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.65 E-value=1e-15 Score=126.58 Aligned_cols=134 Identities=14% Similarity=0.092 Sum_probs=107.8
Q ss_pred CCchHHHHHHHHHHhCCeE-----EEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc-ccc--cc-c-cCCcceEec
Q 039415 71 GRNLHRIVMDLAIVYGPIY-----KLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI-TAS--TL-T-YRASDTVFA 140 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG~i~-----~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~-~~~--~~-~-~~~~~~~~~ 140 (267)
..+++.++.+++ +||||+ ++++ .+.++++||+++++|+.++ ..|++++... ... .+ . ..+.++++.
T Consensus 24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~ 99 (414)
T 2uuq_A 24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ 99 (414)
T ss_dssp TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC
Confidence 357888999984 799999 7765 5789999999999999865 5687775432 111 22 1 224677777
Q ss_pred cCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHH-HHHHHHHHHHHHHHHhcCccC
Q 039415 141 SYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIG-DIAYVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 141 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~-~~~~~~~~~ii~~~~fG~~~~ 213 (267)
+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. ++++|+. +.+..+++++++. +||.+.+
T Consensus 100 ~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~vdl~~~~~~~~~~~vi~~-~~G~~~~ 168 (414)
T 2uuq_A 100 D-PPVHTEFRKLVS-RGFTPRQVETVEPTVRKFVVERLEKLRA--NGGGDIVTELFKPLPSMVVAH-YLGVPEE 168 (414)
T ss_dssp C-TTHHHHHHHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHH--TTEEEHHHHTTTHHHHHHHHH-HTTCCGG
T ss_pred C-chhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHH-HhCCCHH
Confidence 5 999999999996 9999999999999999999999999987 3579997 5567999999999 6998765
No 57
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.65 E-value=7.6e-16 Score=126.75 Aligned_cols=130 Identities=12% Similarity=0.067 Sum_probs=105.7
Q ss_pred CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccCCcchHHHH
Q 039415 71 GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILR 150 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 150 (267)
..+++.++.++++ ||||+++. . ++++++||+++++|+.++. .|.+++... ..... +.++++.+ |+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~~--~~~l~~~~-g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQPA--LPMMIDMD-DPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSCC--CSSGGGCC-TTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcc-cccCccccC-Ccccc--cccccccC-chHHHHHH
Confidence 4678899999987 99998663 3 7899999999999997643 677765432 11222 35666666 99999999
Q ss_pred HHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHH-HHHHHHHHHHHHHhcCccC
Q 039415 151 KLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDI-AYVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 151 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~-~~~~~~~ii~~~~fG~~~~ 213 (267)
++++ ++|++++++.+.+.+.+.++++++.|.. ++++|+... ...+++++++.+ ||.+.+
T Consensus 88 ~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~ 147 (398)
T 2xkr_A 88 KLVN-AGFTRKRVKDKEASIAALCDTLIDAVCE--RGECDFVRDLAAPLPMAVIGDM-LGVRPE 147 (398)
T ss_dssp HHHG-GGSCHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred HHhh-hhhCHHHHHHHHHHHHHHHHHHHHhhhh--cCCccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 9996 9999999999999999999999999976 458999844 568999999998 998765
No 58
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.64 E-value=9.7e-16 Score=126.56 Aligned_cols=136 Identities=14% Similarity=0.199 Sum_probs=107.4
Q ss_pred CCchHHHHHHHHHHhCCeEEEEeCC--EeEEEecCHHHHHHHHHhcccccCCCCCcc----cccccccC-CcceEeccCC
Q 039415 71 GRNLHRIVMDLAIVYGPIYKLWIGS--KLYIIISSPTLVKEVVRDHDRKFANRNPTI----TASTLTYR-ASDTVFASYG 143 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG~i~~~~~~~--~~~vvi~~p~~i~~il~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~g 143 (267)
+.+++.++.+++ +||||+++.+++ .+.+++++|+.+++|+.++ .|.+++... ........ +.++++.+ |
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFAD-Q 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCC-T
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCC-c
Confidence 455668899987 899999998754 6799999999999999753 576654321 11111110 35666665 9
Q ss_pred cchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHH-HHHHHHHHHHHhcCccC
Q 039415 144 SKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAY-VTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 144 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~-~~~~~ii~~~~fG~~~~ 213 (267)
+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. +|+++|+.+.+. .+++++++. +||.+.+
T Consensus 102 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~ 169 (411)
T 2dkk_A 102 PDHNRLRRAVA-GAFTVGATKRLRPRAQEILDGLVDGILA-EGPPADLVERVLEPFPIAVVSE-VMGVPAA 169 (411)
T ss_dssp THHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCSS
T ss_pred hHHHHHHHHhh-HhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHH-HhCCCHH
Confidence 99999999997 9999999999999999999999999986 345899987775 699999998 5998754
No 59
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.64 E-value=1.5e-15 Score=126.05 Aligned_cols=135 Identities=11% Similarity=0.043 Sum_probs=107.8
Q ss_pred CCchHHHHHHHHHHhCCeEEEEeC--CEeEEEecCHHHHHHHHHhcccccCCCCCc--------c-ccc-----ccccCC
Q 039415 71 GRNLHRIVMDLAIVYGPIYKLWIG--SKLYIIISSPTLVKEVVRDHDRKFANRNPT--------I-TAS-----TLTYRA 134 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG~i~~~~~~--~~~~vvi~~p~~i~~il~~~~~~~~~~~~~--------~-~~~-----~~~~~~ 134 (267)
..+++.++.+++ +||||+++++| +.++++++||+.+++|+.++ .|++++.. . ... .....+
T Consensus 19 ~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 357788899986 59999999987 67899999999999999764 68776531 1 100 000112
Q ss_pred cceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 135 SDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 135 ~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
.++++.+ |+.|+++||+++ ++|++++++.+.+.+.+.++++++.|.. .+++|+...+ ..+++++++.+ ||.+.+
T Consensus 96 ~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~g~~dl~~~~~~~~~~~vi~~~-~G~~~~ 170 (425)
T 2z3t_A 96 NWLVFLD-PPHHTELRSLLT-TEFSPSIVTGLRPRIAELASALLDRLRA--QRRPDLVEGFAAPLPILVISAL-LGIPEE 170 (425)
T ss_dssp TCGGGCC-HHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT--SSSCBHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred cccccCC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 5677776 999999999996 9999999999999999999999999976 3479998755 68999999998 998765
No 60
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.62 E-value=3.6e-15 Score=123.51 Aligned_cols=134 Identities=12% Similarity=0.103 Sum_probs=104.2
Q ss_pred ccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccc--------cCCcceEec
Q 039415 69 FLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT--------YRASDTVFA 140 (267)
Q Consensus 69 ~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 140 (267)
.+..+++.++.++ ++||||+++.+| .+++++|+.+++|++++ ..+.+++......... ..+.++++.
T Consensus 26 ~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (418)
T 3r9b_A 26 ATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFL 100 (418)
T ss_dssp GGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGC
T ss_pred hhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhc
Confidence 3467899999998 678999988765 89999999999999754 3344444322111111 113566777
Q ss_pred cCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 141 SYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 141 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+ |+.|+++||+++ ++|++++++.+.+.+.+.++++++ +.. ++++|+...+ ..+++++++. +||.+.+
T Consensus 101 d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~-l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 168 (418)
T 3r9b_A 101 D-PPDHTRLRGLVS-KAFAPRVIKRLEPEITALVDQLLD-AVD--GPEFNLIDNLAYPLPVAVICR-LLGVPIE 168 (418)
T ss_dssp C-TTHHHHHHHHHH-GGGSHHHHGGGHHHHHHHHHHHHH-TCC--SSEEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred C-CchHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHh-hhc--cCCeehHHHHhCcCCHHHHHH-HcCCCHH
Confidence 6 999999999996 999999999999999999999999 764 5689986555 6899999999 8998765
No 61
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.61 E-value=7e-16 Score=127.79 Aligned_cols=134 Identities=14% Similarity=0.134 Sum_probs=107.0
Q ss_pred cCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC-----cc-c--ccccccC-CcceEec
Q 039415 70 LGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP-----TI-T--ASTLTYR-ASDTVFA 140 (267)
Q Consensus 70 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~ 140 (267)
+..+++.++.++ ++||||++ + ++.++++++||+++++|+.++. |.+++. .. . ...+... +.++++.
T Consensus 24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (419)
T 1q5d_A 24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGL 98 (419)
T ss_dssp TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccC
Confidence 456889999999 78999999 5 6778999999999999997653 877751 11 1 1111100 2456666
Q ss_pred cCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHH-HHHHHHHHHHHHHhcCccC
Q 039415 141 SYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDI-AYVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 141 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~-~~~~~~~ii~~~~fG~~~~ 213 (267)
+ |+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. ++++|+... ...+++|+++.+ ||.+.+
T Consensus 99 ~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~ 167 (419)
T 1q5d_A 99 P-PEDHARVRKLVN-PSFTSRAIDLLRAEIQRTVDQLLDARSG--QEEFDVVRDYAEGIPMRAISAL-LKVPAE 167 (419)
T ss_dssp C-HHHHHHHHHHHG-GGGSHHHHGGGHHHHHHHHHHHHHHHTT--SSCEETTTTTGGGSHHHHHHHH-TTCCGG
T ss_pred C-chHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 5 999999999996 9999999999999999999999999976 348998765 478999999998 998765
No 62
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.61 E-value=1.4e-15 Score=125.67 Aligned_cols=135 Identities=15% Similarity=0.082 Sum_probs=105.9
Q ss_pred CCchHHHHHHHHHHhCCeEEEEeCC--EeEEEecCHHHHHHHHHhcccccCCCCCcccccc---cccC-CcceEeccCCc
Q 039415 71 GRNLHRIVMDLAIVYGPIYKLWIGS--KLYIIISSPTLVKEVVRDHDRKFANRNPTITAST---LTYR-ASDTVFASYGS 144 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG~i~~~~~~~--~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~g~ 144 (267)
..+++..+.++++ ||||+++...| .+.+++++++++++++++. +.|++++....... .... +.+++..+ |+
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 112 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSE-HE 112 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCC-HH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccC-cH
Confidence 3578999999976 99999986445 7899999999999999544 46777654322111 1111 24566665 99
Q ss_pred chHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCcc
Q 039415 145 KWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTT 212 (267)
Q Consensus 145 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~ 212 (267)
.|+++|++++ ++|+++.++.+.+.+.+.++++++.|.. ++++|+.+.+ ..+++++++. +||.+.
T Consensus 113 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~ 177 (415)
T 3mgx_A 113 QHRKLRKLVG-PLLSRAAARKLAERVRIEVGDVLGRVLD--GEVCDAATAIGPRIPAAVVCE-ILGVPA 177 (415)
T ss_dssp HHHHHHHHHG-GGSSHHHHHHSHHHHHHHHHHHTTTSSS--SSCEESTTTTTTHHHHHHHHH-HHTCCG
T ss_pred HHHHHHHHhH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHH-HcCCCH
Confidence 9999999996 9999999999999999999999999876 4579998877 6799999998 588653
No 63
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.61 E-value=4e-15 Score=123.34 Aligned_cols=136 Identities=15% Similarity=0.065 Sum_probs=104.7
Q ss_pred CCchHHHHHHHHHHhC-CeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccCCcchHHH
Q 039415 71 GRNLHRIVMDLAIVYG-PIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQIL 149 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 149 (267)
..+++.++.++++++| ||+++..++ +.++++||+.+++|+. +.+.|.+++...........+.++++.+ |+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~d-g~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDMVPTKLD-PPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCCTTTTCC-TTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccccCCccCC-cHHHHHH
Confidence 4588999999987655 899998766 5899999999999995 4457877663222111111124555665 9999999
Q ss_pred HHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 150 RKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 150 R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
|++++ ++|+++.++.+.+.+.+.++++++.|.. ++.+|+...+ ..++.++++. +||.+.+
T Consensus 114 R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~ 174 (421)
T 3lxh_A 114 RKAID-KGLNLAEIRKLEDQIRTIAVEIIEGFAD--RGHCEFGSEFSTVFPVRVFLA-LAGLPVE 174 (421)
T ss_dssp HHHHH-HHHSHHHHHTTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTTHHHHHHHH-HHTCCGG
T ss_pred HHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHHHHHHHHH-HcCCCHH
Confidence 99996 9999999999999999999999999976 5679976655 5678888876 5897654
No 64
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.59 E-value=2e-15 Score=125.84 Aligned_cols=133 Identities=14% Similarity=0.122 Sum_probs=95.9
Q ss_pred CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccCCcchHHHH
Q 039415 71 GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILR 150 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 150 (267)
..+++.++.++ ++||||+++..++ .+++++|+.+++|+.++. .|.+++......... ++.++++.+ |+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~-~~~~l~~~d-g~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVM-RGPVLAQMH-GKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSC-C--------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-ccccccccccccccc-CCCccccCC-cHHHHHHH
Confidence 45777888877 6899999987665 899999999999997664 477765443333232 223466666 99999999
Q ss_pred HHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHH-HHHHHHHHHHHHHHHhcCccC
Q 039415 151 KLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIG-DIAYVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 151 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~-~~~~~~~~~ii~~~~fG~~~~ 213 (267)
++++ ++|+++.++.+.+.+.+.++++++.|.. ++++|+. +....+++++++. +||.+.+
T Consensus 126 r~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~ 185 (441)
T 3nc3_A 126 RIVV-RSFIGDALDHLSPLIKQNAENLLAPYLE--RGKSDLVNDFGKTFAVCVTMD-MLGLDKR 185 (441)
T ss_dssp HHHH-HHHHHTHHHHHHHHHHHHHHHHHTTTTT--TTEEECCCCCHHHHHHHHHHH-HTTCCGG
T ss_pred HHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 9996 9999999999999999999999999976 5679974 4455699999998 5897654
No 65
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.59 E-value=5.8e-15 Score=121.42 Aligned_cols=137 Identities=11% Similarity=0.016 Sum_probs=105.8
Q ss_pred ccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccCCcchHH
Q 039415 69 FLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQI 148 (267)
Q Consensus 69 ~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 148 (267)
.+..+++.++.+++++ |||+++..++ +.++++||+++++|+.++ +.|.+++...........+.++++.+ |+.|++
T Consensus 21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~h~~ 96 (396)
T 3oft_A 21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQD-GAEHKA 96 (396)
T ss_dssp TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCC-HHHHHH
T ss_pred hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccC-CcHHHH
Confidence 3457899999999988 9999998874 588999999999999654 47777663221111111123455555 999999
Q ss_pred HHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 149 LRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 149 ~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+||+++ ++|+++.++.+.+.+.+.++++++.|.. ++.+|+...+ ..++.++++. +||.+.+
T Consensus 97 ~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~ 158 (396)
T 3oft_A 97 FRTPVM-KGLASRFVVALEPKVQAVARKLMESLRP--RGSCDFVSDFAEILPLNIFLT-LIDVPLE 158 (396)
T ss_dssp HHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHGG--GSEEEHHHHTTTTHHHHHHHH-HTTCCGG
T ss_pred HHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 999996 9999999999999999999999999986 4578987666 5577777776 6887643
No 66
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.58 E-value=4.5e-15 Score=122.11 Aligned_cols=131 Identities=18% Similarity=0.152 Sum_probs=102.9
Q ss_pred CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccc------cccccC-CcceEeccCCc
Q 039415 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITA------STLTYR-ASDTVFASYGS 144 (267)
Q Consensus 72 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~g~ 144 (267)
.+++.++.++ ++||||++ + +.+.++++||+++++|+.+ ..|.+++..... ...... +.++++.+ |+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQD-EP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCC-TT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCC-ch
Confidence 4678888877 58999998 6 5789999999999999975 356654321100 011110 35666666 99
Q ss_pred chHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHH-HHHHHHHHHHHHHhcCccC
Q 039415 145 KWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDI-AYVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 145 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~-~~~~~~~ii~~~~fG~~~~ 213 (267)
.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. ++++|+... ...+++++++.+ ||.+.+
T Consensus 86 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~~vi~~~-~G~~~~ 151 (397)
T 3buj_A 86 DHGRLRGVVG-PAFSPSALRRLEPVIAGTVDDLLRPALA--RGAMDVVDELAYPLALRAVLGL-LGLPAA 151 (397)
T ss_dssp HHHHHHHHHG-GGSSTTTTGGGHHHHHHHHHHHHHHHHT--TTEEEHHHHTHHHHHHHHHHHH-HTCCGG
T ss_pred hHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHhHHHHHHHH-hCCCHH
Confidence 9999999997 9999999999999999999999999986 568998755 468999999998 998765
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.57 E-value=4.4e-15 Score=122.17 Aligned_cols=130 Identities=12% Similarity=0.149 Sum_probs=97.4
Q ss_pred HHHHHHHHhCCeEEEEeC-CE---eEEEecCHHHHHHHHHhcccccCCCCCc------c---cccccccCCcceEeccCC
Q 039415 77 IVMDLAIVYGPIYKLWIG-SK---LYIIISSPTLVKEVVRDHDRKFANRNPT------I---TASTLTYRASDTVFASYG 143 (267)
Q Consensus 77 ~~~~~~~~yG~i~~~~~~-~~---~~vvi~~p~~i~~il~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~g 143 (267)
.+.+++++ |||+++.++ |. ++|+++||+++++|+.++ ..|.+++.. . ....... +.++++.+ |
T Consensus 18 ~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-g 93 (398)
T 1lfk_A 18 PADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPREL-VGNLMDYD-P 93 (398)
T ss_dssp ECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CC-TTCGGGCC-T
T ss_pred hhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCccccccccc-ccCccccC-C
Confidence 34457665 999999875 45 899999999999999333 246665431 1 1111111 35676666 9
Q ss_pred cchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHH-HHHHHHHHHHhcCccC
Q 039415 144 SKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYV-TMINMVSSMLWGGTTQ 213 (267)
Q Consensus 144 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~-~~~~ii~~~~fG~~~~ 213 (267)
+.|+++|++++ ++|++++++.+.+.+.+.++++++.|.. .++++|+.+.+.. ++.++++. +||.+.+
T Consensus 94 ~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 161 (398)
T 1lfk_A 94 PEHTRLRRKLT-PGFTLRKMQRMAPYIEQIVNDRLDEMER-AGSPADLIAFVADKVPGAVLCE-LVGVPRD 161 (398)
T ss_dssp THHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG
T ss_pred HHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 99999999997 9999999999999999999999999975 3568999999886 89999997 5998764
No 68
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.55 E-value=8.1e-15 Score=120.52 Aligned_cols=133 Identities=16% Similarity=0.180 Sum_probs=104.4
Q ss_pred cCCchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccC-C-CCCc--cccc--cccc-CCcceEecc
Q 039415 70 LGRNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFA-N-RNPT--ITAS--TLTY-RASDTVFAS 141 (267)
Q Consensus 70 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~~ 141 (267)
+..+++..+.++ ++||||+++++ ++.+.|+++||+++++++.++ .|. + ++.. .... .... .+.++++.
T Consensus 14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 89 (396)
T 1n40_A 14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI- 89 (396)
T ss_dssp CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH-
Confidence 456789999999 99999999997 788999999999999999754 465 4 4321 1110 0110 12455443
Q ss_pred CCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 142 YGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 142 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
.|+++||+++ ++|+++ ++.+.+.+.+.++++++.|... ++++|+.+.+ ..+++++++. +||.+.+
T Consensus 90 ---~h~~~R~~~~-~~fs~~-~~~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 155 (396)
T 1n40_A 90 ---ADAGLRKAVM-KAITPK-APGLEQFLRDTANSLLDNLITE-GAPADLRNDFADPLATALHCK-VLGIPQE 155 (396)
T ss_dssp ---HHTTCHHHHH-HHTSSC-STTHHHHHHHHHHHHHHHHHHH-CSCEETTTTTHHHHHHHHHHH-HHTCCGG
T ss_pred ---HHHHHHHHHH-HhhChH-HHHhHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHhHHHHHHH-HhCCChh
Confidence 8999999997 999999 9999999999999999999752 5689998665 4799999998 8998764
No 69
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.55 E-value=1.6e-14 Score=117.57 Aligned_cols=128 Identities=17% Similarity=0.210 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC-----cccc--cc--ccc-CCcceEeccCC
Q 039415 74 LHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP-----TITA--ST--LTY-RASDTVFASYG 143 (267)
Q Consensus 74 ~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~-----~~~~--~~--~~~-~~~~~~~~~~g 143 (267)
++..+.++ ++||||+++ | +.+++++|+.+++++.++ ..|++++. .... .. ... .+.++++.+ |
T Consensus 1 p~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD-P 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC-T
T ss_pred CCHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCC-C
Confidence 35667777 589999987 4 589999999999999864 46877763 1100 01 111 125666666 9
Q ss_pred cchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 144 SKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 144 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+.|+++|++++ ++|++++++.+.+.+.+.++++++.| . ++++|+.+.+ ..+++++++.+ ||.+.+
T Consensus 74 ~~h~~~R~~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l-~--~g~~d~~~~~~~~~~~~vi~~~-~G~~~~ 139 (368)
T 1io7_A 74 PLHDELRSMSA-DIFSPQKLQTLETFIRETTRSLLDSI-D--PREDDIVKKLAVPLPIIVISKI-LGLPIE 139 (368)
T ss_dssp THHHHHHGGGT-TTTCHHHHHHHHHHHHHHHHHHHHTC-C--TTSEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred hHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHh-h--cCCccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 99999999997 99999999999999999999999999 5 3479999876 78999999999 998764
No 70
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.52 E-value=2.1e-13 Score=113.11 Aligned_cols=136 Identities=15% Similarity=0.109 Sum_probs=104.6
Q ss_pred CCchHHHHHHHHHHhCCeEEEEe-CCEeEEEecCHHHHHHHHHhcccccCCCCC---ccccc------ccccCCcceEec
Q 039415 71 GRNLHRIVMDLAIVYGPIYKLWI-GSKLYIIISSPTLVKEVVRDHDRKFANRNP---TITAS------TLTYRASDTVFA 140 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG~i~~~~~-~~~~~vvi~~p~~i~~il~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~ 140 (267)
..+++.++.+++++ |||+++.. ++.+++++++++.+++++.++ ..|++++. ..... .....+.+++..
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM 114 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCccccc
Confidence 45689999999775 99999976 456799999999999999765 35665431 11111 011112455566
Q ss_pred cCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 141 SYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 141 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+ |+.|+++|++++ ++|+++.++.+.+.+.+.++++++.|.. ++++|+...+ ..++.++++. +||.+.+
T Consensus 115 d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~ 183 (426)
T 3rwl_A 115 D-RPRHDEQRKAVS-PIVAPANLAALEGTIRERVSKTLDGLPV--GEEFDWVDRVSIEITTQMLAT-LFDFPFE 183 (426)
T ss_dssp C-TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHTSCS--SSCEEHHHHTHHHHHHHHHHH-HHTCCGG
T ss_pred C-chHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhc--CCCcchHHHHHHHHHHHHHHH-HcCCCHH
Confidence 5 999999999996 9999999999999999999999999965 6789987776 5788888886 8997654
No 71
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.50 E-value=4.1e-14 Score=114.10 Aligned_cols=114 Identities=12% Similarity=0.145 Sum_probs=92.2
Q ss_pred HHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccCCcchHHHHHHHHHhhcChhh
Q 039415 83 IVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKAN 162 (267)
Q Consensus 83 ~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~ 162 (267)
++||||+++ | .++++||+++++|+.++ ..|.+++....... .+.++++.+ |+.|+++|++++ ++|++++
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~---~~~~l~~~~-g~~~~~~R~~~~-~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA---GGISFITMD-NPEHKEFRDISA-PYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGGCC-HHHHHHHHHHHH-HHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc---cccccccCC-chHHHHHHHHhh-hhcCHHH
Confidence 579999986 3 89999999999999865 36877752111111 246677665 999999999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 163 LDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 163 l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
++.+.+.+.+.++++++.|. ++|+.+.+ ..+++|+++.+ ||.+.+
T Consensus 71 l~~~~~~i~~~~~~l~~~l~-----~~d~~~~~~~~~~~~vi~~~-~G~~~~ 116 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID-----NKDIISEYAVRLPVNIISKI-LGIPDS 116 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT-----TSCHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHHHHHHHHHHHhcc-----ccCHHHHHhhhhhHHHHHHH-cCCCHH
Confidence 99999999999999998885 68998865 89999999998 998764
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.48 E-value=1.3e-13 Score=112.18 Aligned_cols=122 Identities=16% Similarity=0.141 Sum_probs=96.0
Q ss_pred HHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC-cc-cc-----c-ccccC--CcceEeccCCc
Q 039415 75 HRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP-TI-TA-----S-TLTYR--ASDTVFASYGS 144 (267)
Q Consensus 75 ~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~-~~-~~-----~-~~~~~--~~~~~~~~~g~ 144 (267)
+..+.++ ++||||+++. | .+++++|+.+++++.++ ..|.+++. .. .. . ...+. +.++++.+ |+
T Consensus 2 ~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 74 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSD-PP 74 (367)
T ss_dssp HHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCC-TT
T ss_pred CHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCC-ch
Confidence 5567777 5799999887 3 89999999999999865 36777642 11 11 1 22210 15677776 99
Q ss_pred chHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCc
Q 039415 145 KWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGT 211 (267)
Q Consensus 145 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~ 211 (267)
.|+++||+++ ++|++++++. +.+.+.++++++.|. | ++|+.+.+ ..+++++++. +||.+
T Consensus 75 ~h~~~R~~~~-~~fs~~~l~~--~~i~~~~~~l~~~l~---g-~~d~~~~~~~~~~~~vi~~-~~G~~ 134 (367)
T 3b4x_A 75 LHDELRNLTA-DAFNPSNLPV--DFVREVTVKLLSELD---E-EFDVIESFAIPLPILVISK-MLGIN 134 (367)
T ss_dssp HHHHHHHTTG-GGGSGGGSCH--HHHHHHHHHHHHTCC---S-EEEHHHHTTTHHHHHHHHH-HHTCC
T ss_pred hHHHHHHHHH-HhcCHhhhcc--hHHHHHHHHHHHhcc---C-CcchHHHHHHhhHHHHHHH-HcCCC
Confidence 9999999997 9999999988 999999999999886 3 59998765 7999999999 79998
No 73
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.46 E-value=1.9e-13 Score=112.30 Aligned_cols=132 Identities=11% Similarity=0.050 Sum_probs=102.3
Q ss_pred CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccCCcchHHHHH
Q 039415 72 RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRK 151 (267)
Q Consensus 72 ~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 151 (267)
.+++.++.++++ +|||+++..| .+++++++.+++++.++ .|+.++...........+.+++..+ |+.|+++|+
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSD-PPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCC-TTHHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCC-chHHHHHHH
Confidence 477888888865 5899987543 68999999999999643 4544321111111111124565555 999999999
Q ss_pred HHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhcCccC
Q 039415 152 LFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 152 ~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~~~~fG~~~~ 213 (267)
+++ ++|++++++.+.+.+.+.++++++.|.. ++++|+.+.+..+++++++..+||.+.+
T Consensus 93 ~~~-~~fs~~~~~~~~~~i~~~~~~l~~~~~~--~~~~d~~~~~~~~~~~vi~~~~~G~~~~ 151 (394)
T 2wiy_A 93 QTN-KWFTPKLVDGWVRTTRELVGDLLDGVEA--GQVIEARRDLAVVPTHVTMARVLQLPED 151 (394)
T ss_dssp HHH-TTCSHHHHHHHTHHHHHHHHHHHHTCCT--TCCEEHHHHHTHHHHHHHHHHHHTCCCC
T ss_pred HHH-hccCHHHHHHHHHHHHHHHHHHHHHHhc--cCCeeHHHHHHhhhHHHHHHHHcCCCHh
Confidence 996 9999999999999999999999998865 6789999999999999999999998654
No 74
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.35 E-value=3.4e-13 Score=111.53 Aligned_cols=132 Identities=10% Similarity=0.055 Sum_probs=97.2
Q ss_pred CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC-ccc-cc----cc-ccCCcceEeccCC
Q 039415 71 GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP-TIT-AS----TL-TYRASDTVFASYG 143 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~-~~~-~~----~~-~~~~~~~~~~~~g 143 (267)
..+|+.+ ..+ ++|||++++..++.. +++++++.+++|+.++. +..... ... .. .. ...+.+++..+ |
T Consensus 32 ~~~P~~~-~~l-r~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 105 (416)
T 3p3o_A 32 PNFSWDS-PEV-AEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLD-G 105 (416)
T ss_dssp TTCCTTS-HHH-HHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCC-H
T ss_pred ccCCchH-HHH-HHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCC-c
Confidence 4567777 444 679999999886656 99999999999997653 332211 000 00 00 00023555665 9
Q ss_pred cchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 144 SKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 144 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
+.|+++||+++ ++|+++.++.+.+.+.+.++++++.| . ++++|+...+ ..+++++++. +||.+.+
T Consensus 106 ~~h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l-~--~g~~d~~~~~~~~~~~~vi~~-l~G~~~~ 171 (416)
T 3p3o_A 106 ADHRRLRGLAT-HPFTPRRITAVQPFVRSTVEQLIDKL-P--QGDFDFVQHFPHPLPALVMCQ-LLGFPLE 171 (416)
T ss_dssp HHHHHHHHTTC-GGGSHHHHHHHHHHHHHHHHHHHHTC-C--SSSEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred hHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhh-c--cCCccHHHHHHHHHHHHHHHH-HhCCCHH
Confidence 99999999997 99999999999999999999999999 4 4569975555 5699999998 5897644
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.29 E-value=1.6e-11 Score=101.36 Aligned_cols=146 Identities=16% Similarity=0.048 Sum_probs=102.6
Q ss_pred CCCccccc---ccccCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccc---cccc-c
Q 039415 59 RGLPLVVY---LPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT---ASTL-T 131 (267)
Q Consensus 59 ~~~p~~G~---~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~---~~~~-~ 131 (267)
.++|.+|- ...+..||+.++.+++ ++|||+++ ++.+.+++++++.+++++.+.. .|++...... .... .
T Consensus 18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR-~~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~ 93 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYFADPYPEQETLR-EAGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKPW 93 (412)
T ss_dssp TTSCEECCCTTSHHHHHSCHHHHHHHH-HHCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCCS
T ss_pred CCCCccCCCCCCHHHHhCcHHHHHHHH-hcCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCccccccccccccc
Confidence 45676662 1223567888998885 58999754 5557899999999999996543 4543322111 1111 1
Q ss_pred cCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeH-HHHHHHHHHHHHHHHHhcC
Q 039415 132 YRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDI-GDIAYVTMINMVSSMLWGG 210 (267)
Q Consensus 132 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~-~~~~~~~~~~ii~~~~fG~ 210 (267)
..+..++..+ |+.|+++||+++ ++|++++++.+.+.+.+.++++++.+.. .++++|+ .+....+++++++.+ +|.
T Consensus 94 ~~~~~~~~~D-g~~H~r~R~~~~-~~Fs~~~l~~~~~~i~~~~~~l~~~~~~-~~~~~D~v~~~~~~~~~~~i~~l-~g~ 169 (412)
T 4dnj_A 94 RPPSLILEAD-PPAHTRTRAVLS-KVLSPATMKRLRDGFAAAADAKIDELLA-RGGNIDAIADLAEAYPLSVFPDA-MGL 169 (412)
T ss_dssp SCCCTTTTCC-TTHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHH-TTSEEETCCCCCCHHHHHHHHHH-HTC
T ss_pred cCCCccccCC-hHHHHHHHhhcc-cccCHHHHHHhhHHHHHHHHHHHHhhhc-cCCCceeHHHHHhhhhHhHHHHH-cCC
Confidence 1123445555 999999999996 9999999999999999999999999976 3567775 455567788888876 454
Q ss_pred cc
Q 039415 211 TT 212 (267)
Q Consensus 211 ~~ 212 (267)
..
T Consensus 170 ~~ 171 (412)
T 4dnj_A 170 KQ 171 (412)
T ss_dssp CS
T ss_pred ch
Confidence 43
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.16 E-value=4.6e-10 Score=92.68 Aligned_cols=136 Identities=12% Similarity=-0.019 Sum_probs=94.6
Q ss_pred CCchHHHHHHHHHHhC-CeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccccCCcceEeccCCcchHHH
Q 039415 71 GRNLHRIVMDLAIVYG-PIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQIL 149 (267)
Q Consensus 71 ~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 149 (267)
..+++..+.+++++.+ +++....+| ..+++++.+.+++|+.+. +.|+++...............++..+ +++|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~D-~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEAGEKAQMVPTKMD-PPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEESSCCSSSTTSSCSSCTTTTTCC-TTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCc-hhccCCCcccccccccccccCcccCC-cHHHHHH
Confidence 4577888888866544 455443333 578899999999999654 35765443221111111112233444 9999999
Q ss_pred HHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHHHHHHHHHHhcCccC
Q 039415 150 RKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTMINMVSSMLWGGTTQ 213 (267)
Q Consensus 150 R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~~~ii~~~~fG~~~~ 213 (267)
||+++ ++|++++++.+.+.+.+.++++++.+.. ++++|+...+ ..++..+++. ++|....
T Consensus 113 Rrll~-~~Fs~~~l~~~~~~i~~~~~~lld~l~~--~g~~D~v~~~a~~l~~~vi~~-llg~~~~ 173 (417)
T 4dxy_A 113 RKALD-KGLNLAKIRKVEDKVREVASSLIDSFAA--RGECDFAAEYAELFPVHVFMA-LADLPLE 173 (417)
T ss_dssp HHHHH-HHHCHHHHHTTHHHHHHHHHHHHHHHHT--TSEEEHHHHTTTTHHHHHHHH-HTTCCGG
T ss_pred HHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHhhh--cCCeeeHHHHHhhhHHHHHHH-HcCCCHH
Confidence 99997 9999999999999999999999999987 5688976655 4566666665 5676543
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.35 E-value=9.4e-10 Score=89.35 Aligned_cols=132 Identities=8% Similarity=0.036 Sum_probs=85.9
Q ss_pred CCCC-CCCCcccccccc-----cCCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcc--
Q 039415 54 LPPG-PRGLPLVVYLPF-----LGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTI-- 125 (267)
Q Consensus 54 ~~pg-p~~~p~~G~~~~-----~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~-- 125 (267)
.||| +.++|++|+... +..+++.++.+++++ ||++.. .+.+++++++.+++|+.++ .|.+++...
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence 3566 446789987533 456889999999865 998764 4589999999999999763 576654211
Q ss_pred cc-----cccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHH-HHHH
Q 039415 126 TA-----STLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIA-YVTM 199 (267)
Q Consensus 126 ~~-----~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~-~~~~ 199 (267)
.. ..... +.++++.+ |+.| + ++|+ . .+.+.+.++++++.|. +++|+...+ ..++
T Consensus 108 ~~~~~~~~~~~~-~~~l~~~d-g~~H-------~-~~Ft-----~-~~~i~~~~~~ll~~~~----g~~Dl~~~~a~~l~ 167 (381)
T 2yjn_B 108 WMRAAGAPPAEW-AQPFRDVH-AASW-------E-GEVP-----D-VGELAESFAGLLPGAG----ARLDLVGDFAWQVP 167 (381)
T ss_dssp HHHHHTCCHHHH-THHHHHHH-HCCC-------C-SCCC-----C-CSCHHHHTSTTSCC----------CCCCCCTHHH
T ss_pred cccccccccchh-hhhhhhCC-chhh-------h-hccC-----C-hHHHHHHHHHHHHhcc----CcchHHHHHHHHHH
Confidence 00 00001 24566666 9999 4 8888 2 5788888888888885 368888665 6999
Q ss_pred HHHHHHHHhcCccC
Q 039415 200 INMVSSMLWGGTTQ 213 (267)
Q Consensus 200 ~~ii~~~~fG~~~~ 213 (267)
+++||.+ ||.+.+
T Consensus 168 ~~vi~~l-~G~~~~ 180 (381)
T 2yjn_B 168 VQGMTAV-LGAAGV 180 (381)
T ss_dssp HHHHHTC------C
T ss_pred HHHHHHH-cCCCHH
Confidence 9999995 998764
No 78
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=73.18 E-value=12 Score=22.02 Aligned_cols=50 Identities=18% Similarity=0.391 Sum_probs=36.2
Q ss_pred ccccccccCCc----hHHHHHHHHHHhCCeEEEEeC-------CEeEEEecCHHHHHHHHH
Q 039415 63 LVVYLPFLGRN----LHRIVMDLAIVYGPIYKLWIG-------SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 63 ~~G~~~~~~~~----~~~~~~~~~~~yG~i~~~~~~-------~~~~vvi~~p~~i~~il~ 112 (267)
++|+++.-..+ ..+.+.++..+||+|..+.+. |.-+|...+++.++..+.
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~ 65 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVK 65 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHT
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHH
Confidence 45665543222 346788889999999888764 456788889999998885
No 79
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.08 E-value=6 Score=24.74 Aligned_cols=60 Identities=10% Similarity=0.125 Sum_probs=42.1
Q ss_pred ccccccccc-CCc-hHHHHHHHHHHhC-CeEEEEeCCEeEEEecCHHHHHHHHHh-cccccCCCC
Q 039415 62 PLVVYLPFL-GRN-LHRIVMDLAIVYG-PIYKLWIGSKLYIIISSPTLVKEVVRD-HDRKFANRN 122 (267)
Q Consensus 62 p~~G~~~~~-~~~-~~~~~~~~~~~yG-~i~~~~~~~~~~vvi~~p~~i~~il~~-~~~~~~~~~ 122 (267)
-+++|+..- ..+ ....+.++..+|| +|..+ .+|.-+|...+.+.++..+.+ ++..+-.++
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 347887765 222 2445888999995 98888 568899999999999888753 333333444
No 80
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=58.60 E-value=31 Score=21.54 Aligned_cols=49 Identities=10% Similarity=0.150 Sum_probs=35.5
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC--------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG--------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvi~~p~~i~~il~~ 113 (267)
++|+++.- -..+.+.++..+||+|..+.+. |.-+|...+++.+..++..
T Consensus 15 fV~~Lp~~--~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 15 YIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp EEECCCTT--CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred EEECCCCC--CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 45665442 2245678888999999888763 4567888899999998863
No 81
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=58.25 E-value=25 Score=23.11 Aligned_cols=52 Identities=19% Similarity=0.317 Sum_probs=36.1
Q ss_pred ccccccccc-CC-chHHHHHHHHHHhCCeEEEEeC------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFL-GR-NLHRIVMDLAIVYGPIYKLWIG------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~-~~-~~~~~~~~~~~~yG~i~~~~~~------~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++..- .. +....+.+++.+||+|..+.+. |.-+|...+++.+...+..
T Consensus 32 LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 32 VLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 467776643 22 2233467889999999888763 3568888899988888754
No 82
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=57.74 E-value=28 Score=21.18 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=35.1
Q ss_pred ccccccccc-C-CchHHHHHHHHHHhCCeEEEEeC------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFL-G-RNLHRIVMDLAIVYGPIYKLWIG------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~-~-~~~~~~~~~~~~~yG~i~~~~~~------~~~~vvi~~p~~i~~il~~ 113 (267)
-++|++..- . .+....+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 12 l~V~nL~~~~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~ 71 (96)
T 2dgx_A 12 VQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNS 71 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHH
Confidence 356666543 1 12223344888999999988774 3457788899999888753
No 83
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=55.61 E-value=24 Score=21.40 Aligned_cols=52 Identities=12% Similarity=0.242 Sum_probs=35.9
Q ss_pred ccccccccc-C-CchHHHHHHHHHHhCCeEEEEeC------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFL-G-RNLHRIVMDLAIVYGPIYKLWIG------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~-~-~~~~~~~~~~~~~yG~i~~~~~~------~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++..- . .+....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 11 l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 11 IYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 356666543 1 12223455888999999888764 5568888899999888853
No 84
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=50.82 E-value=30 Score=19.60 Aligned_cols=40 Identities=10% Similarity=0.174 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHhc
Q 039415 75 HRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRDH 114 (267)
Q Consensus 75 ~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~~ 114 (267)
.+.+.++..+||+|..+.+. |.-+|...+++.++..+...
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 45678888999998887652 24577788999999988643
No 85
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=48.81 E-value=47 Score=20.83 Aligned_cols=57 Identities=25% Similarity=0.424 Sum_probs=39.7
Q ss_pred CCCCCCCCcccccccccCCchHHHHHHHHHHhCCeEEEEeC------CEeEEEecCHHHHHHHHH
Q 039415 54 LPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG------SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 54 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------~~~~vvi~~p~~i~~il~ 112 (267)
.||.|...=++||+..- -....+.++..+||+|..+.+. |.-+|...+++.+...+.
T Consensus 3 ~~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 34555444567776543 2245578888999999888762 356788889998888875
No 86
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=47.97 E-value=47 Score=20.54 Aligned_cols=53 Identities=17% Similarity=0.378 Sum_probs=39.1
Q ss_pred CcccccccccCCc----hHHHHHHHHHHhCCeEEEEeC-------CEeEEEecCHHHHHHHHHh
Q 039415 61 LPLVVYLPFLGRN----LHRIVMDLAIVYGPIYKLWIG-------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 61 ~p~~G~~~~~~~~----~~~~~~~~~~~yG~i~~~~~~-------~~~~vvi~~p~~i~~il~~ 113 (267)
.=++|+++.-..+ ....+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 3467777754322 457788899999999988874 4567888899988888764
No 87
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=45.36 E-value=47 Score=19.84 Aligned_cols=49 Identities=8% Similarity=0.108 Sum_probs=35.0
Q ss_pred CCcccccccccCCchHHHHHHHHHHhCCeEEEEeC----CEeEEEecCHHHHHHH
Q 039415 60 GLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG----SKLYIIISSPTLVKEV 110 (267)
Q Consensus 60 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~vvi~~p~~i~~i 110 (267)
..-++|++..- -..+.+.++..+||+|..+.+. |--+|...+++.++++
T Consensus 12 ~~l~V~~Lp~~--~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 12 SKVFVGRCTED--MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp CEEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 34466766543 2245678888999999998874 5678888899988753
No 88
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=40.13 E-value=50 Score=18.62 Aligned_cols=38 Identities=13% Similarity=0.134 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 039415 75 HRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 75 ~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~ 112 (267)
.+.+.++..+||+|..+.+. |.-+|...+++.++.++.
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 59 (75)
T 2mss_A 13 VEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 59 (75)
T ss_dssp HHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHS
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 45678888999998887652 245677789999988875
No 89
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=38.41 E-value=51 Score=21.10 Aligned_cols=65 Identities=15% Similarity=0.172 Sum_probs=38.9
Q ss_pred CCCCCCCcccccccccC--------CchHHHHHHHHHHhCCeEEEEeC-----CEeEEEecCHHHHHHHHHh-cccccC
Q 039415 55 PPGPRGLPLVVYLPFLG--------RNLHRIVMDLAIVYGPIYKLWIG-----SKLYIIISSPTLVKEVVRD-HDRKFA 119 (267)
Q Consensus 55 ~pgp~~~p~~G~~~~~~--------~~~~~~~~~~~~~yG~i~~~~~~-----~~~~vvi~~p~~i~~il~~-~~~~~~ 119 (267)
+|.|..+=.+.|+.... .+..+-+.+...+||.|..+.+. |.-+|-..+++.+...+.. ++..|.
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~ 81 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA 81 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEET
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 45555555555655441 11233445666789999888763 4457777788888777643 333443
No 90
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.55 E-value=83 Score=19.49 Aligned_cols=39 Identities=13% Similarity=0.295 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCeEEEEeC----CEeEEEecCHHHHHHHHHh
Q 039415 75 HRIVMDLAIVYGPIYKLWIG----SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 75 ~~~~~~~~~~yG~i~~~~~~----~~~~vvi~~p~~i~~il~~ 113 (267)
.+.+.+++.+||+|..+.+. |.-+|...+++.+...+..
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 56788999999999888873 3567888899999888865
No 91
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=34.15 E-value=62 Score=18.88 Aligned_cols=51 Identities=16% Similarity=0.178 Sum_probs=34.8
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHhc
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRDH 114 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~~ 114 (267)
=++|++..- -..+.+.++..+||+|..+.+. |.-+|...+++.++..+...
T Consensus 14 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 14 MFVGGLSWD--TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEECCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 356666543 2345677888999998887652 23467778999998888543
No 92
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=32.64 E-value=72 Score=19.98 Aligned_cols=38 Identities=24% Similarity=0.425 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCeEEEEeCC-EeEEEecCHHHHHHHHH
Q 039415 75 HRIVMDLAIVYGPIYKLWIGS-KLYIIISSPTLVKEVVR 112 (267)
Q Consensus 75 ~~~~~~~~~~yG~i~~~~~~~-~~~vvi~~p~~i~~il~ 112 (267)
..-+.++...||.+.--|+-. .-.+++.+|+.+++++.
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 556788889999776667654 56889999999999986
No 93
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=32.58 E-value=91 Score=19.40 Aligned_cols=64 Identities=17% Similarity=0.189 Sum_probs=38.3
Q ss_pred CCCCCcccccccc---cCCchHHHHHHHHHHhCCeEEEEeC----------CEeEEEecCHHHHHHHHHh-cccccCC
Q 039415 57 GPRGLPLVVYLPF---LGRNLHRIVMDLAIVYGPIYKLWIG----------SKLYIIISSPTLVKEVVRD-HDRKFAN 120 (267)
Q Consensus 57 gp~~~p~~G~~~~---~~~~~~~~~~~~~~~yG~i~~~~~~----------~~~~vvi~~p~~i~~il~~-~~~~~~~ 120 (267)
.|...=++.|+.. +..+..+-+.+.+.+||+|..+.+. |.-+|-..+++.+...... ++..|..
T Consensus 6 ~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~G 83 (105)
T 2pe8_A 6 CPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGG 83 (105)
T ss_dssp SCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 3444445666543 2234466777888899998888652 2346677788888777653 3434433
No 94
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=32.17 E-value=96 Score=19.51 Aligned_cols=50 Identities=14% Similarity=-0.047 Sum_probs=36.0
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC--CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG--SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~vvi~~p~~i~~il~~ 113 (267)
-++||+..- -..+.+.+++.+||+|..+.+. +.-+|...+++.++..+..
T Consensus 19 l~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 19 VVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp EEEEECCSS--CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 356666543 1234567788899999888764 5678888899999888863
No 95
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=30.26 E-value=1e+02 Score=19.53 Aligned_cols=48 Identities=17% Similarity=0.093 Sum_probs=33.1
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~ 112 (267)
++|++..- -..+.+.++..+||+|..+.+. |.-+|...+++.++..+.
T Consensus 40 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 96 (124)
T 2jwn_A 40 YVGNVDYG--STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVA 96 (124)
T ss_dssp EEEEECTT--CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHT
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHh
Confidence 45554432 2245678888999998877652 234777889999988883
No 96
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.06 E-value=93 Score=18.73 Aligned_cols=50 Identities=14% Similarity=0.205 Sum_probs=34.9
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC--------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG--------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++..- -..+.+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 20 l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 20 LFISGLPFS--CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 356665542 2245678888899998887763 3457778899999988854
No 97
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=28.79 E-value=1.1e+02 Score=19.57 Aligned_cols=48 Identities=10% Similarity=0.038 Sum_probs=34.8
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++ . -..+.+.++..+||+|..+.+. +.-+|...+++.+...+..
T Consensus 42 lfVgnl-~---~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 42 LYVYGE-D---MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEECS-S---CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEcCC-C---CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 356663 2 2356778888999998877764 5567888899988888753
No 98
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.18 E-value=1.1e+02 Score=18.88 Aligned_cols=50 Identities=14% Similarity=-0.047 Sum_probs=36.9
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC--CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG--SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~vvi~~p~~i~~il~~ 113 (267)
-++|++..- -..+.+.+++.+||+|..+.+. +.-+|...+++.++..+..
T Consensus 18 l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCSS--CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 356666532 2356678888999999888763 5678888899999988864
No 99
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=27.53 E-value=1.1e+02 Score=18.92 Aligned_cols=46 Identities=26% Similarity=0.326 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhCCeEEEEeC-----------CEeEEEecCHHHHHHHHHh-cccccCC
Q 039415 75 HRIVMDLAIVYGPIYKLWIG-----------SKLYIIISSPTLVKEVVRD-HDRKFAN 120 (267)
Q Consensus 75 ~~~~~~~~~~yG~i~~~~~~-----------~~~~vvi~~p~~i~~il~~-~~~~~~~ 120 (267)
.+-+.+...+||+|..+.+. |.-+|-..+++.+...+.. ++..|..
T Consensus 29 ~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~G 86 (105)
T 3v4m_A 29 VEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFAN 86 (105)
T ss_dssp HHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred HHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCC
Confidence 34566777899999998863 3456778899888877743 3334443
No 100
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=26.34 E-value=1.3e+02 Score=19.09 Aligned_cols=57 Identities=9% Similarity=0.067 Sum_probs=38.5
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh-cccccCC
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD-HDRKFAN 120 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~-~~~~~~~ 120 (267)
-++|++..- -....+.++..+||+|..+.+. +.-+|...+++.+..++.. ++..+..
T Consensus 25 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 91 (126)
T 3ex7_B 25 LFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMG 91 (126)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSS
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCC
Confidence 356665532 2245678888999999888762 3457888899999998853 4334433
No 101
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=26.11 E-value=1.2e+02 Score=18.90 Aligned_cols=49 Identities=8% Similarity=0.096 Sum_probs=34.9
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC-------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG-------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvi~~p~~i~~il~~ 113 (267)
++|++..- -..+.+.+++.+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 9 fV~nLp~~--~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 9 FIKNLDKS--IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCCC--CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 56666543 1245678888999999877652 2357888899999988854
No 102
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=25.88 E-value=1.4e+02 Score=19.32 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=36.1
Q ss_pred CcccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 61 LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 61 ~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
.-++|++..- -..+.+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 48 ~l~V~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 48 CLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CBCEETCTTS--CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4456666543 2245678888999999888762 2457788899999998863
No 103
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=25.46 E-value=1.2e+02 Score=18.41 Aligned_cols=50 Identities=18% Similarity=0.102 Sum_probs=34.9
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC--------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG--------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 18 l~v~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 18 LFVGMLNKQ--QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 356666542 2245678888999998887753 3456777899999888853
No 104
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.35 E-value=1.1e+02 Score=18.04 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=35.4
Q ss_pred CcccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 61 LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 61 ~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
.=+++++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 17 ~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 17 CLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CEEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3456666543 2245678888999999887762 1346777899999988863
No 105
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.92 E-value=1.2e+02 Score=18.19 Aligned_cols=56 Identities=13% Similarity=0.061 Sum_probs=37.7
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHhcccccC
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRDHDRKFA 119 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~~~~~~~ 119 (267)
=++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++..+.-+...+.
T Consensus 13 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~ 77 (99)
T 2dgs_A 13 IFVGGIPHN--CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIM 77 (99)
T ss_dssp EEEESCCSS--CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSS
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEEC
Confidence 356665432 2245678888899999888763 3457788899999998864433333
No 106
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.68 E-value=1.3e+02 Score=18.79 Aligned_cols=50 Identities=16% Similarity=0.277 Sum_probs=36.9
Q ss_pred CcccccccccCCchHHHHHHHHHHhCCeEEEEeC---CEeEEEecCHHHHHHHHH
Q 039415 61 LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 61 ~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvi~~p~~i~~il~ 112 (267)
-=++||+..- -.-+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 18 ~LfV~nLp~~--vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 18 VIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp EEEECSCCTT--SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 3467776543 2245678889999999888764 567888889998888875
No 107
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=24.66 E-value=1.8e+02 Score=23.82 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=36.1
Q ss_pred CcccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 61 LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 61 ~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
.-++||+..- -....+.+++.+||+|..+.+. |.-+|...+++.+..++..
T Consensus 104 ~lfV~nL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 104 TLFVARVNYD--TTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred EEEEeCCCCC--CCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 3466766543 2245678888999999888762 3467888899999888854
No 108
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=24.66 E-value=1.5e+02 Score=19.44 Aligned_cols=49 Identities=10% Similarity=0.157 Sum_probs=34.6
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeCC-----EeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGS-----KLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~-----~~~vvi~~p~~i~~il~~ 113 (267)
++||+..- -..+.+.+++.+||+|..+.+.. .-+|...+++.++.....
T Consensus 32 ~V~NL~~~--vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 32 IVENLFYP--VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEESCCSC--CCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCCC--CCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 47776532 22456788999999998887632 367888898888877643
No 109
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=24.58 E-value=1.3e+02 Score=18.72 Aligned_cols=50 Identities=18% Similarity=0.143 Sum_probs=35.1
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++..- -..+.+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 9 lfV~nL~~~--~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 9 VTFARLNDN--VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 356665532 2355678888999999888752 2347888899999988853
No 110
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.48 E-value=1.2e+02 Score=18.27 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=35.5
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC-------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG-------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 18 l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 18 LHVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp EEEESCCTT--CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 356666542 2245678888899999888763 3567888899999998863
No 111
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.47 E-value=1.2e+02 Score=18.33 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=36.7
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHhccccc
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRDHDRKF 118 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~~~~~~ 118 (267)
-++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++.++..+...+
T Consensus 19 l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~ 82 (105)
T 2dh8_A 19 LFVGGLDWS--TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTL 82 (105)
T ss_dssp ECCBSCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeE
Confidence 356665432 2245678888999998877652 234677789999999887643333
No 112
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=24.37 E-value=1.2e+02 Score=18.29 Aligned_cols=50 Identities=16% Similarity=0.202 Sum_probs=35.2
Q ss_pred ccccccccC----CchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 039415 63 LVVYLPFLG----RNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 63 ~~G~~~~~~----~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~ 112 (267)
++|+++... .-....+.++..+||+|..+.+. |.-+|...+++.++..+.
T Consensus 10 fV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 10 VVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp EEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 456665431 12245678888999999988763 345788889999988885
No 113
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=24.11 E-value=1.3e+02 Score=18.30 Aligned_cols=49 Identities=10% Similarity=0.059 Sum_probs=34.3
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
++|++..- -..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 27 ~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 27 FVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 56665542 2245678888999999888762 2356777899999888863
No 114
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=23.78 E-value=1.8e+02 Score=20.02 Aligned_cols=49 Identities=10% Similarity=0.128 Sum_probs=35.0
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC-----CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG-----SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-----~~~~vvi~~p~~i~~il~~ 113 (267)
++||+..- -..+.+.+++.+||+|-.+.+. +.-+|-..|++.+.+....
T Consensus 50 ~VgNL~~~--vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFYP--VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCSC--CCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 46776432 2245678889999999888763 2467888899988888754
No 115
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.30 E-value=1.4e+02 Score=18.54 Aligned_cols=58 Identities=16% Similarity=0.187 Sum_probs=38.5
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC---CEeEEEecCHHHHHHHHHh-cccccCCCC
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---SKLYIIISSPTLVKEVVRD-HDRKFANRN 122 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvi~~p~~i~~il~~-~~~~~~~~~ 122 (267)
++||+..- -..+.+.+++.+||+|..+.+. +.-+|...+++.++..+.. ++..+..+.
T Consensus 14 ~V~nLp~~--~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 75 (111)
T 1whx_A 14 LAKNLPAG--TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVP 75 (111)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSB
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeE
Confidence 45555432 2355688889999999888763 3567888899998888753 333444433
No 116
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.29 E-value=1.3e+02 Score=18.60 Aligned_cols=48 Identities=15% Similarity=0.068 Sum_probs=33.0
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~ 112 (267)
++|++..- -..+.+.++..+||+|..+.+. |.-+|...+++.++..+.
T Consensus 29 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 85 (114)
T 2cq4_A 29 FCMQLAAR--IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG 85 (114)
T ss_dssp EEESCCTT--CCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHH
Confidence 45555432 2245678888999999888763 245677788888888773
No 117
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.10 E-value=1.6e+02 Score=18.97 Aligned_cols=50 Identities=16% Similarity=0.277 Sum_probs=36.6
Q ss_pred CcccccccccCCchHHHHHHHHHHhCCeEEEEeC---CEeEEEecCHHHHHHHHH
Q 039415 61 LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 61 ~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvi~~p~~i~~il~ 112 (267)
.=++|++..- -.-+.+.+++.+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 33 ~LfVgNLp~~--vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 33 VIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 3467776653 2245678889999998887764 567888889998888875
No 118
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=23.01 E-value=1.7e+02 Score=19.37 Aligned_cols=50 Identities=12% Similarity=0.046 Sum_probs=34.3
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHhc
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRDH 114 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~~ 114 (267)
++|++..- -..+.+.++..+||+|..+.+. |.-+|-..+++.+..++..+
T Consensus 91 ~V~nlp~~--~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 149 (167)
T 2cjk_A 91 FVGGIGPD--VRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNK 149 (167)
T ss_dssp EEEEECTT--CCHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCS
T ss_pred EECCCCCC--CCHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCC
Confidence 45554432 2245678888999998887753 24577788999999988643
No 119
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.80 E-value=1.3e+02 Score=17.92 Aligned_cols=49 Identities=12% Similarity=0.172 Sum_probs=34.2
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC------------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG------------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------------~~~~vvi~~p~~i~~il~~ 113 (267)
++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 9 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 9 FIKNLNFS--TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 45655432 2245678888999998877653 2346777899999999864
No 120
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=22.34 E-value=1.3e+02 Score=17.65 Aligned_cols=49 Identities=20% Similarity=0.168 Sum_probs=34.1
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC-------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG-------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvi~~p~~i~~il~~ 113 (267)
++|++..- -..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 12 ~V~nlp~~--~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 12 FVRNLPFD--FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EECSCCTT--CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 55665532 2355678888999998887653 2346777899999888763
No 121
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=22.28 E-value=1.4e+02 Score=18.24 Aligned_cols=49 Identities=8% Similarity=0.034 Sum_probs=35.5
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 30 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 30 FVTSIHEE--AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 56665542 2245678888999999888763 4567888899999988863
No 122
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=22.02 E-value=1.3e+02 Score=17.71 Aligned_cols=49 Identities=22% Similarity=0.228 Sum_probs=34.2
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC--------CEeEEEecCHHHHHHHHH
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG--------SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvi~~p~~i~~il~ 112 (267)
=+++++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++..+.
T Consensus 19 l~v~nlp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 19 VFVGNLEAR--VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 356665442 2245678888999999887763 234677789999988886
No 123
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.91 E-value=1.5e+02 Score=18.32 Aligned_cols=50 Identities=14% Similarity=0.044 Sum_probs=36.4
Q ss_pred CcccccccccCCchHHHHHHHHHHhCCeEEEEeC---CEeEEEecCHHHHHHHHH
Q 039415 61 LPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 61 ~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvi~~p~~i~~il~ 112 (267)
.=++||+..- -....+.+++.+||+|..+.+. +.-+|-..+.+.+...+.
T Consensus 17 ~l~V~nLp~~--~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 17 VVHVRGLCES--VVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp EEEEESCCSS--CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3467776542 2345678889999999888763 456788889998888875
No 124
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=21.83 E-value=1.4e+02 Score=17.93 Aligned_cols=39 Identities=21% Similarity=0.431 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCeEEEEe----CCEeEEEecCHHHHHHHHHh
Q 039415 75 HRIVMDLAIVYGPIYKLWI----GSKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 75 ~~~~~~~~~~yG~i~~~~~----~~~~~vvi~~p~~i~~il~~ 113 (267)
.+.+.++..+||+|..+.+ -+.-+|-..+++.+...+..
T Consensus 14 ~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 14 KGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp HHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 4567888899999888775 24567888899999988863
No 125
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=21.76 E-value=1.2e+02 Score=17.31 Aligned_cols=49 Identities=12% Similarity=0.041 Sum_probs=34.3
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~ 112 (267)
=++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++..+.
T Consensus 10 l~V~nl~~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 10 LYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 356665532 2245678888999999888762 235778889999988874
No 126
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.74 E-value=84 Score=19.57 Aligned_cols=56 Identities=16% Similarity=0.108 Sum_probs=36.3
Q ss_pred cccccccccCCchHHHHH---HHHHHhCCeEEEEeC------------CEeEEEecCHHHHHHHHHh-cccccC
Q 039415 62 PLVVYLPFLGRNLHRIVM---DLAIVYGPIYKLWIG------------SKLYIIISSPTLVKEVVRD-HDRKFA 119 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~---~~~~~yG~i~~~~~~------------~~~~vvi~~p~~i~~il~~-~~~~~~ 119 (267)
=++|++..-.. .+.+. ++..+||+|..+.+. |.-+|...+++.++..+.. ++..+.
T Consensus 18 l~V~nLp~~~~--~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~ 89 (111)
T 2cpi_A 18 VFVVGLSQRLA--DPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVD 89 (111)
T ss_dssp EEEEEECTTTC--CHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEET
T ss_pred EEEECCCCCCC--HHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEEC
Confidence 35666654311 23345 777899998887753 2557778899999988865 443443
No 127
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=21.74 E-value=1.3e+02 Score=21.12 Aligned_cols=50 Identities=10% Similarity=0.140 Sum_probs=35.1
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC--------CEeEEEecCHHHHHHHHHhc
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG--------SKLYIIISSPTLVKEVVRDH 114 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvi~~p~~i~~il~~~ 114 (267)
++|+++.- -..+.+.++..+||+|..+.+. |.-+|...+++.++..+...
T Consensus 113 ~V~nLp~~--~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~ 170 (193)
T 2voo_A 113 YIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 170 (193)
T ss_dssp EEECCCTT--CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCT
T ss_pred EecCCCCc--CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhC
Confidence 45555432 3356788889999998887653 34577778999999988543
No 128
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.69 E-value=1.4e+02 Score=17.83 Aligned_cols=48 Identities=10% Similarity=0.038 Sum_probs=35.6
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++ . -..+.+.++..+||+|..+.++ +.-+|...+++.+...+..
T Consensus 18 l~V~n~-~---~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 18 LYVYGE-D---MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEECS-S---CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEcCC-C---CCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 356763 2 2356678888999999888874 4567888899999988854
No 129
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.60 E-value=1.4e+02 Score=17.82 Aligned_cols=49 Identities=16% Similarity=0.259 Sum_probs=34.9
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 12 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 12 FVRNLSYT--SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEECCCTT--CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 45555432 2245678888999999888763 3467888899999998853
No 130
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.27 E-value=1.3e+02 Score=17.30 Aligned_cols=49 Identities=16% Similarity=0.105 Sum_probs=33.4
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHH
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVR 112 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~ 112 (267)
=++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++..+.
T Consensus 8 l~v~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 8 LYIRGLQPG--TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEESCCTT--CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 356665432 2244567777899998887652 245778889999888875
No 131
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.17 E-value=1.2e+02 Score=18.80 Aligned_cols=49 Identities=12% Similarity=0.085 Sum_probs=34.2
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC-------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG-------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~vvi~~p~~i~~il~~ 113 (267)
++|++..- -..+.+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 33 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 33 HVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp EEESCCTT--CCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred EEECCCCc--CCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 45555432 2345678888999998877763 4567788899988888753
No 132
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=21.12 E-value=1.6e+02 Score=18.43 Aligned_cols=49 Identities=16% Similarity=0.196 Sum_probs=35.0
Q ss_pred ccccccccCCchHHHHHHHHHHhCCeEEEEeC--------CEeEEEecCHHHHHHHHHh
Q 039415 63 LVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG--------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 63 ~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvi~~p~~i~~il~~ 113 (267)
++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.++.++..
T Consensus 11 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 11 FIGGLNRE--TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEECCTTT--CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 45555432 2345678888999998887653 4567888899999998864
No 133
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=20.76 E-value=2.3e+02 Score=20.13 Aligned_cols=54 Identities=13% Similarity=0.124 Sum_probs=33.2
Q ss_pred cchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-CCC--ceeHHHHHHHH
Q 039415 144 SKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-DSK--AIDIGDIAYVT 198 (267)
Q Consensus 144 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~--~~d~~~~~~~~ 198 (267)
..|..++..++ ..|++.++.........+++.-.+.+... .++ .+|+.+++.++
T Consensus 111 ~k~q~~~~~ls-~~~sp~~L~~~L~~a~~e~eeeS~~l~~~F~~~~~e~dv~~Fl~~y 167 (192)
T 2p22_C 111 ASWQDYHSEFS-KKYGDIALKKKLEQNTKKLDEESSQLETTTRSIDSADDLDQFIKNY 167 (192)
T ss_dssp HHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchHHHHHHHH
Confidence 34444445664 67888888776666666666666666654 222 45666666554
No 134
>3pgw_A U1-A; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 1fht_A 2u1a_A 2aym_A 2b0g_A
Probab=20.51 E-value=1.9e+02 Score=21.50 Aligned_cols=52 Identities=12% Similarity=0.252 Sum_probs=35.6
Q ss_pred ccccccccc-C-CchHHHHHHHHHHhCCeEEEEeC------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFL-G-RNLHRIVMDLAIVYGPIYKLWIG------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~-~-~~~~~~~~~~~~~yG~i~~~~~~------~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++..- . .+..+.+.+++.+||+|..+.+. |.-+|...+++.+...+..
T Consensus 12 l~V~nlp~~~~~~~l~~~L~~~F~~~G~i~~v~~~~~~~~~g~afV~f~~~~~a~~A~~~ 71 (282)
T 3pgw_A 12 IYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 71 (282)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHhccCCeEEEEEcCCCCcceEEEEEECCHHHHHHHHHH
Confidence 356776543 2 22233466888999999888753 3567888899999988843
No 135
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=20.35 E-value=1.5e+02 Score=17.62 Aligned_cols=39 Identities=21% Similarity=0.303 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 75 HRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 75 ~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
.+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 16 ~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 16 EEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp HHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45678888999999888762 3457788899999888853
No 136
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=20.10 E-value=1.6e+02 Score=17.89 Aligned_cols=50 Identities=14% Similarity=0.106 Sum_probs=34.2
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC--------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG--------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~vvi~~p~~i~~il~~ 113 (267)
=+++++..- -..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 32 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 32 LLVSNLDFG--VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 356665432 2245678888999999877653 2346777899999888863
No 137
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.06 E-value=1.2e+02 Score=18.21 Aligned_cols=50 Identities=12% Similarity=0.055 Sum_probs=34.9
Q ss_pred cccccccccCCchHHHHHHHHHHhCCeEEEEeC---------CEeEEEecCHHHHHHHHHh
Q 039415 62 PLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIG---------SKLYIIISSPTLVKEVVRD 113 (267)
Q Consensus 62 p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~vvi~~p~~i~~il~~ 113 (267)
=++|++..- -..+.+.++..+||+|..+.+. +.-+|...+++.+...+..
T Consensus 15 l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 2cqb_A 15 LYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 73 (102)
T ss_dssp EEEESCCSS--CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456666543 2245678888999998887762 2456777899999888853
Done!