Query 039419
Match_columns 1035
No_of_seqs 918 out of 6778
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 16:10:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039419.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039419hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4.7E-77 1.6E-81 744.4 32.6 595 3-606 25-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.8E-62 6.2E-67 612.8 29.8 538 54-598 77-720 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.4E-58 4.7E-63 572.8 37.4 571 19-600 4-627 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 1.9E-54 6.4E-59 535.8 37.6 538 30-577 49-627 (680)
5 3t6q_A CD180 antigen; protein- 100.0 7.5E-55 2.6E-59 532.0 31.4 521 45-599 26-564 (606)
6 3j0a_A TOLL-like receptor 5; m 100.0 5E-54 1.7E-58 542.1 39.5 523 37-600 11-565 (844)
7 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-54 4.9E-59 529.5 31.2 496 54-584 32-570 (606)
8 3t6q_A CD180 antigen; protein- 100.0 2.7E-54 9.4E-59 527.0 30.6 526 21-578 14-566 (606)
9 4eco_A Uncharacterized protein 100.0 1.3E-54 4.6E-59 529.2 24.7 520 8-599 57-630 (636)
10 3j0a_A TOLL-like receptor 5; m 100.0 5.2E-53 1.8E-57 532.9 33.9 520 19-578 14-566 (844)
11 3vq2_A TLR4, TOLL-like recepto 100.0 3.2E-53 1.1E-57 517.6 27.4 505 57-600 14-563 (606)
12 4ecn_A Leucine-rich repeat pro 100.0 8.8E-52 3E-56 511.1 23.0 485 10-549 285-864 (876)
13 4asz_A BDNF/NT-3 growth factor 100.0 6.8E-51 2.3E-55 443.7 19.0 259 686-975 13-289 (299)
14 4gt4_A Tyrosine-protein kinase 100.0 8.5E-51 2.9E-55 444.9 19.0 258 686-973 26-304 (308)
15 4aoj_A High affinity nerve gro 100.0 2.1E-50 7.2E-55 446.1 21.5 259 686-975 41-319 (329)
16 4b9d_A Serine/threonine-protei 100.0 3.2E-51 1.1E-55 451.8 14.4 254 685-969 23-277 (350)
17 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.8E-51 2.7E-55 441.1 14.5 253 686-969 32-285 (311)
18 3omv_A RAF proto-oncogene seri 100.0 8E-50 2.7E-54 434.8 22.4 261 686-974 36-299 (307)
19 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-49 5.4E-54 479.1 23.2 504 18-581 3-519 (549)
20 2z63_A TOLL-like receptor 4, v 100.0 5.1E-49 1.7E-53 477.1 27.3 520 45-599 21-560 (570)
21 4fih_A Serine/threonine-protei 100.0 9.6E-50 3.3E-54 439.3 18.2 250 686-969 74-324 (346)
22 4g3f_A NF-kappa-beta-inducing 100.0 9.9E-49 3.4E-53 430.1 23.1 256 685-976 57-317 (336)
23 3hyh_A Carbon catabolite-derep 100.0 3.7E-49 1.3E-53 422.5 16.7 250 685-969 12-263 (275)
24 3fpq_A Serine/threonine-protei 100.0 1.7E-48 5.8E-53 421.3 20.5 250 688-969 28-283 (290)
25 4fie_A Serine/threonine-protei 100.0 1.3E-48 4.5E-53 440.9 18.3 250 686-969 151-401 (423)
26 3ubd_A Ribosomal protein S6 ki 100.0 3.7E-49 1.3E-53 428.3 12.4 250 686-969 24-282 (304)
27 4ase_A Vascular endothelial gr 100.0 1.7E-48 5.8E-53 434.2 17.5 263 685-976 63-348 (353)
28 2z63_A TOLL-like receptor 4, v 100.0 1.7E-47 5.8E-52 463.7 27.0 506 57-600 10-536 (570)
29 3hmm_A TGF-beta receptor type- 100.0 1.5E-48 5.3E-53 428.6 15.8 266 686-976 3-298 (303)
30 2z81_A CD282 antigen, TOLL-lik 100.0 6.7E-48 2.3E-52 464.8 22.5 486 58-599 9-514 (549)
31 2z7x_B TOLL-like receptor 1, v 100.0 2.7E-47 9.4E-52 456.0 22.0 455 57-577 3-486 (520)
32 4eco_A Uncharacterized protein 100.0 3E-47 1E-51 464.3 20.9 470 54-601 81-606 (636)
33 4ecn_A Leucine-rich repeat pro 100.0 7.4E-47 2.5E-51 467.2 23.9 483 54-599 323-870 (876)
34 4g31_A Eukaryotic translation 100.0 4.5E-47 1.5E-51 414.5 18.4 253 685-969 4-280 (299)
35 2z7x_B TOLL-like receptor 1, v 100.0 2.1E-46 7.3E-51 448.3 15.4 456 33-552 3-484 (520)
36 4g8a_A TOLL-like receptor 4; l 100.0 3.6E-45 1.2E-49 449.4 26.3 557 4-599 9-584 (635)
37 4b99_A Mitogen-activated prote 100.0 2.5E-44 8.5E-49 407.9 19.4 264 686-969 54-345 (398)
38 4g8a_A TOLL-like receptor 4; l 100.0 4.2E-43 1.4E-47 431.0 30.6 535 31-600 53-611 (635)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-43 4E-48 428.1 23.9 454 33-578 34-516 (562)
40 4f9c_A Cell division cycle 7-r 100.0 4.8E-44 1.6E-48 401.5 16.9 202 683-908 18-252 (361)
41 3v5w_A G-protein coupled recep 100.0 8.7E-44 3E-48 418.5 17.2 252 685-969 188-450 (689)
42 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.8E-43 1.3E-47 423.6 21.1 440 30-553 52-514 (562)
43 3uto_A Twitchin; kinase, muscl 100.0 2.7E-42 9.1E-47 411.1 20.4 255 683-969 154-411 (573)
44 3tki_A Serine/threonine-protei 100.0 4.5E-41 1.5E-45 375.1 20.4 255 685-969 6-262 (323)
45 2qkw_B Protein kinase; three-h 100.0 1.1E-40 3.7E-45 372.5 23.0 275 682-975 35-315 (321)
46 2psq_A Fibroblast growth facto 100.0 1.2E-40 3.9E-45 378.9 22.0 262 685-976 80-365 (370)
47 3zgw_A Maternal embryonic leuc 100.0 3.3E-41 1.1E-45 378.1 16.0 254 682-969 6-261 (347)
48 3fe3_A MAP/microtubule affinit 100.0 7.4E-41 2.5E-45 373.3 18.3 250 685-969 14-265 (328)
49 1jl5_A Outer protein YOPM; leu 100.0 2.4E-40 8.2E-45 385.6 21.6 422 52-576 9-433 (454)
50 3fxz_A Serine/threonine-protei 100.0 2.6E-40 9E-45 364.5 20.4 252 684-969 18-270 (297)
51 3v47_A TOLL-like receptor 5B a 100.0 1.9E-40 6.4E-45 389.9 20.0 382 80-504 12-412 (455)
52 3uim_A Brassinosteroid insensi 100.0 2.3E-40 7.9E-45 370.8 19.7 273 684-972 28-308 (326)
53 3soc_A Activin receptor type-2 100.0 1.2E-40 4E-45 372.0 17.2 272 686-976 24-319 (322)
54 3s95_A LIMK-1, LIM domain kina 100.0 1E-39 3.5E-44 362.7 24.6 263 686-978 10-285 (310)
55 1jl5_A Outer protein YOPM; leu 100.0 2.9E-40 9.8E-45 385.0 20.4 403 30-550 11-430 (454)
56 3p86_A Serine/threonine-protei 100.0 2.3E-40 7.9E-45 366.9 18.2 261 685-976 36-299 (309)
57 1o6l_A RAC-beta serine/threoni 100.0 4.3E-40 1.5E-44 368.1 20.3 252 685-969 4-261 (337)
58 3cbl_A C-FES, proto-oncogene t 100.0 1.7E-40 5.9E-45 378.9 16.8 260 686-976 114-375 (377)
59 3kul_A Ephrin type-A receptor 100.0 4E-40 1.4E-44 367.9 19.0 262 685-977 48-315 (325)
60 3l9p_A Anaplastic lymphoma kin 100.0 2.8E-40 9.6E-45 375.5 17.5 265 685-979 70-349 (367)
61 4eqm_A Protein kinase; transfe 100.0 1.3E-39 4.4E-44 358.6 22.1 262 686-974 11-274 (294)
62 4hcu_A Tyrosine-protein kinase 100.0 6.7E-40 2.3E-44 356.3 19.3 256 686-975 10-266 (269)
63 2yab_A Death-associated protei 100.0 2.7E-39 9.1E-44 365.0 24.0 259 684-969 10-273 (361)
64 2nru_A Interleukin-1 receptor- 100.0 1E-38 3.5E-43 354.2 27.4 276 681-974 20-305 (307)
65 3v47_A TOLL-like receptor 5B a 100.0 2.2E-39 7.5E-44 380.8 23.2 376 17-432 6-412 (455)
66 2qol_A Ephrin receptor; recept 100.0 1E-39 3.5E-44 371.3 19.4 262 686-978 45-312 (373)
67 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-39 4.2E-44 362.9 19.6 262 685-976 22-312 (314)
68 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.1E-40 3.1E-44 355.0 17.8 257 686-976 8-265 (268)
69 4euu_A Serine/threonine-protei 100.0 7.2E-39 2.5E-43 357.3 25.2 269 686-973 9-307 (319)
70 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.9E-40 9.8E-45 372.0 14.0 252 685-969 22-281 (353)
71 4dc2_A Protein kinase C IOTA t 100.0 2E-39 7E-44 369.0 20.6 258 685-969 51-319 (396)
72 3vhe_A Vascular endothelial gr 100.0 7.1E-40 2.4E-44 372.2 16.8 263 685-976 21-356 (359)
73 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.3E-40 2.5E-44 365.8 16.6 250 685-969 8-259 (336)
74 3tt0_A Basic fibroblast growth 100.0 2.4E-39 8.3E-44 370.3 21.3 262 685-976 68-353 (382)
75 2izr_A Casein kinase I isoform 100.0 4.5E-39 1.5E-43 360.8 22.7 263 686-978 9-284 (330)
76 1luf_A Muscle-specific tyrosin 100.0 1.3E-39 4.6E-44 367.5 18.1 264 685-978 46-338 (343)
77 3gen_A Tyrosine-protein kinase 100.0 2E-39 6.8E-44 355.4 18.8 258 685-976 23-281 (283)
78 3poz_A Epidermal growth factor 100.0 2.9E-39 9.8E-44 361.6 19.9 261 686-978 15-281 (327)
79 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-39 7.6E-44 359.7 18.7 249 685-969 5-259 (318)
80 3q4u_A Activin receptor type-1 100.0 5.3E-39 1.8E-43 355.5 21.4 260 685-973 7-300 (301)
81 3soa_A Calcium/calmodulin-depe 100.0 5.8E-39 2E-43 371.8 22.6 258 682-969 7-268 (444)
82 2y0a_A Death-associated protei 100.0 4.9E-39 1.7E-43 359.3 21.1 260 683-969 8-272 (326)
83 4fr4_A YANK1, serine/threonine 100.0 2.8E-39 9.7E-44 366.7 19.1 252 685-968 14-271 (384)
84 2c30_A Serine/threonine-protei 100.0 5.7E-39 2E-43 357.9 20.8 248 688-969 47-295 (321)
85 1xjd_A Protein kinase C, theta 100.0 9.2E-40 3.1E-44 366.4 14.4 251 685-968 16-269 (345)
86 3kex_A Receptor tyrosine-prote 100.0 3E-39 1E-43 361.2 18.4 261 686-978 13-279 (325)
87 3a8x_A Protein kinase C IOTA t 100.0 5.4E-39 1.8E-43 360.9 20.5 257 686-969 9-276 (345)
88 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.7E-39 9.1E-44 364.0 17.9 249 685-969 40-294 (350)
89 3lb7_A RAF proto-oncogene seri 100.0 9.2E-39 3.2E-43 353.8 21.9 262 686-975 36-300 (307)
90 2bdw_A Hypothetical protein K1 100.0 6.9E-39 2.4E-43 362.8 21.3 256 683-969 26-285 (362)
91 3c0i_A Peripheral plasma membr 100.0 2.9E-39 9.9E-44 364.9 18.0 259 685-969 23-287 (351)
92 1tki_A Titin; serine kinase, m 100.0 4.2E-39 1.4E-43 358.6 18.9 252 685-969 4-258 (321)
93 2i0e_A Protein kinase C-beta I 100.0 3E-39 1E-43 363.4 17.6 252 685-969 19-277 (353)
94 1rjb_A FL cytokine receptor; k 100.0 3.4E-39 1.2E-43 364.3 17.7 264 685-977 44-336 (344)
95 3niz_A Rhodanese family protei 100.0 1.8E-38 6.2E-43 352.3 23.3 266 684-969 19-301 (311)
96 3qd2_B Eukaryotic translation 100.0 8.1E-39 2.8E-43 359.3 20.5 254 684-969 4-326 (332)
97 1mp8_A Focal adhesion kinase 1 100.0 8.6E-39 2.9E-43 349.9 20.0 260 685-977 14-278 (281)
98 1t46_A HOMO sapiens V-KIT hard 100.0 1.1E-38 3.8E-43 355.0 21.3 263 685-976 22-308 (313)
99 2i1m_A Macrophage colony-stimu 100.0 5.5E-39 1.9E-43 360.8 18.7 266 685-979 45-330 (333)
100 1qcf_A Haematopoetic cell kina 100.0 2.7E-39 9.2E-44 378.2 16.3 256 685-974 187-443 (454)
101 1csn_A Casein kinase-1; phosph 100.0 3.8E-38 1.3E-42 348.0 24.5 264 686-978 10-286 (298)
102 2pvf_A Fibroblast growth facto 100.0 8.9E-39 3E-43 359.0 19.6 263 685-977 34-320 (334)
103 3qup_A Tyrosine-protein kinase 100.0 6.8E-39 2.3E-43 358.4 18.6 263 686-977 23-300 (323)
104 3a62_A Ribosomal protein S6 ki 100.0 6.2E-39 2.1E-43 358.6 18.1 252 686-969 17-277 (327)
105 1k9a_A Carboxyl-terminal SRC k 100.0 1.7E-38 5.8E-43 370.8 22.5 252 686-976 193-446 (450)
106 2yex_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 346.5 21.1 256 684-969 5-262 (276)
107 3ork_A Serine/threonine protei 100.0 5E-39 1.7E-43 357.2 16.8 257 685-968 11-273 (311)
108 3ugc_A Tyrosine-protein kinase 100.0 9.3E-39 3.2E-43 352.3 18.9 268 686-976 10-292 (295)
109 3lzb_A Epidermal growth factor 100.0 9.8E-39 3.4E-43 357.0 19.3 262 686-979 15-282 (327)
110 3t9t_A Tyrosine-protein kinase 100.0 1.2E-38 4E-43 346.1 18.9 256 686-975 8-264 (267)
111 3kmu_A ILK, integrin-linked ki 100.0 7.8E-39 2.7E-43 348.2 17.6 254 685-974 9-269 (271)
112 3o0g_A Cell division protein k 100.0 2.5E-38 8.5E-43 348.3 21.4 265 686-969 2-283 (292)
113 2y94_A 5'-AMP-activated protei 100.0 7.5E-39 2.6E-43 373.1 17.5 250 686-969 16-267 (476)
114 3gni_B Strad alpha; kinase fol 100.0 2.5E-38 8.7E-43 363.2 21.7 208 685-907 24-241 (389)
115 3v8s_A RHO-associated protein 100.0 8.1E-39 2.8E-43 366.2 17.4 255 686-969 69-330 (410)
116 3dtc_A Mitogen-activated prote 100.0 7.9E-39 2.7E-43 348.2 16.5 257 686-973 7-271 (271)
117 1ob3_A PFPK5, cell division co 100.0 2.2E-38 7.6E-43 347.9 20.0 264 686-969 2-281 (288)
118 2eva_A TAK1 kinase - TAB1 chim 100.0 3.4E-38 1.2E-42 349.5 21.6 256 686-977 8-265 (307)
119 1opk_A P150, C-ABL, proto-onco 100.0 6.7E-39 2.3E-43 378.3 16.8 256 686-974 220-477 (495)
120 2r5t_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 363.9 15.3 248 685-965 37-286 (373)
121 3kfa_A Tyrosine-protein kinase 100.0 8.9E-39 3E-43 351.2 16.6 263 685-980 12-276 (288)
122 3op5_A Serine/threonine-protei 100.0 7.9E-39 2.7E-43 363.8 16.5 278 686-978 35-332 (364)
123 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.1E-39 2.4E-43 374.2 16.4 255 686-974 184-439 (452)
124 1mqb_A Ephrin type-A receptor 100.0 3.5E-38 1.2E-42 353.6 21.0 263 686-979 44-313 (333)
125 1p4o_A Insulin-like growth fac 100.0 1.1E-38 3.6E-43 356.7 16.7 261 685-975 24-299 (322)
126 3bz5_A Internalin-J, INLJ; leu 100.0 1.3E-38 4.6E-43 371.2 18.2 367 45-512 33-399 (457)
127 3fdn_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 348.6 16.5 250 685-969 8-258 (279)
128 2zv2_A Calcium/calmodulin-depe 100.0 1.7E-38 5.8E-43 350.7 18.0 263 686-969 13-293 (298)
129 2xir_A Vascular endothelial gr 100.0 1.3E-38 4.3E-43 355.1 17.1 264 685-977 26-312 (316)
130 1kob_A Twitchin; kinase, intra 100.0 2.2E-38 7.4E-43 360.8 19.2 255 683-969 48-305 (387)
131 1qpc_A LCK kinase; alpha beta 100.0 2.1E-38 7.2E-43 346.5 18.3 257 686-976 13-270 (279)
132 2acx_A G protein-coupled recep 100.0 8.9E-39 3.1E-43 376.7 16.4 254 686-969 184-445 (576)
133 3dbq_A Dual specificity protei 100.0 1.2E-38 4.2E-43 359.0 16.9 254 686-970 9-275 (343)
134 2eue_A Carbon catabolite derep 100.0 1.2E-38 3.9E-43 347.7 16.1 249 686-969 13-263 (275)
135 4f0f_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 345.1 21.2 258 686-972 19-286 (287)
136 2w4o_A Calcium/calmodulin-depe 100.0 1.9E-38 6.5E-43 357.8 18.3 252 684-969 51-306 (349)
137 3cok_A Serine/threonine-protei 100.0 2.1E-38 7.3E-43 346.2 17.8 253 685-969 10-263 (278)
138 2yfx_A Tyrosine-protein kinase 100.0 2.1E-38 7.2E-43 354.9 18.1 265 685-979 29-308 (327)
139 3uc3_A Serine/threonine-protei 100.0 2.4E-38 8E-43 358.6 18.6 253 685-969 19-275 (361)
140 2a2a_A Death-associated protei 100.0 8.6E-38 2.9E-42 348.9 22.9 260 683-969 9-273 (321)
141 1b6c_B TGF-B superfamily recep 100.0 1.1E-37 3.8E-42 351.6 23.9 265 682-976 38-337 (342)
142 4eut_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 362.0 20.4 271 686-975 9-309 (396)
143 3kn6_A Ribosomal protein S6 ki 100.0 2.8E-38 9.7E-43 352.8 18.6 254 686-969 8-271 (325)
144 2wqm_A Serine/threonine-protei 100.0 9.6E-38 3.3E-42 346.9 22.8 269 684-979 30-301 (310)
145 4ejn_A RAC-alpha serine/threon 100.0 7.5E-39 2.6E-43 374.0 14.5 252 685-969 147-405 (446)
146 1u59_A Tyrosine-protein kinase 100.0 5.7E-38 1.9E-42 344.5 20.4 262 686-979 9-276 (287)
147 2zmd_A Dual specificity protei 100.0 2.9E-38 9.9E-43 361.6 18.7 254 686-970 56-322 (390)
148 3f3z_A Calcium/calmodulin-depe 100.0 9.4E-38 3.2E-42 340.9 22.0 254 682-969 5-262 (277)
149 1nxk_A MAP kinase-activated pr 100.0 3.8E-38 1.3E-42 361.7 19.7 254 683-970 58-323 (400)
150 3og7_A AKAP9-BRAF fusion prote 100.0 2.8E-38 9.7E-43 347.2 17.7 261 686-974 24-287 (289)
151 3cc6_A Protein tyrosine kinase 100.0 6.1E-38 2.1E-42 343.2 20.3 262 685-979 11-277 (281)
152 2pmi_A Negative RE, cyclin-dep 100.0 7.9E-38 2.7E-42 348.3 21.5 264 685-969 4-294 (317)
153 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-38 3.7E-43 355.6 14.2 270 688-978 33-313 (318)
154 2h34_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 346.3 21.8 265 682-975 30-296 (309)
155 3dls_A PAS domain-containing s 100.0 1.6E-38 5.5E-43 356.2 15.4 252 683-969 21-275 (335)
156 4e5w_A Tyrosine-protein kinase 100.0 4.7E-38 1.6E-42 348.0 18.8 263 686-974 21-301 (302)
157 4agu_A Cyclin-dependent kinase 100.0 5.5E-38 1.9E-42 349.0 19.4 264 685-969 2-285 (311)
158 3mdy_A Bone morphogenetic prot 100.0 2.9E-37 9.9E-42 347.4 25.5 271 683-977 34-333 (337)
159 3lxl_A Tyrosine-protein kinase 100.0 7.5E-39 2.6E-43 358.5 12.3 275 686-980 23-308 (327)
160 3brb_A Proto-oncogene tyrosine 100.0 6.2E-38 2.1E-42 348.9 19.6 262 686-976 34-309 (313)
161 3ttj_A Mitogen-activated prote 100.0 8.8E-38 3E-42 365.1 21.8 261 685-969 61-356 (464)
162 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9.2E-38 3.2E-42 355.3 21.3 252 686-976 65-340 (365)
163 3kk8_A Calcium/calmodulin depe 100.0 1.4E-37 4.9E-42 340.8 21.9 254 685-969 5-262 (284)
164 3p1a_A MYT1 kinase, membrane-a 100.0 6E-38 2.1E-42 348.2 19.0 248 685-969 56-305 (311)
165 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.4E-38 1.1E-42 371.4 17.7 254 686-968 185-448 (543)
166 3hko_A Calcium/calmodulin-depe 100.0 6.5E-38 2.2E-42 353.9 19.4 267 680-969 20-331 (345)
167 3llt_A Serine/threonine kinase 100.0 7.8E-38 2.7E-42 355.4 20.1 198 685-906 34-262 (360)
168 4aw2_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 363.9 17.2 258 686-969 74-339 (437)
169 2qr7_A Ribosomal protein S6 ki 100.0 4.8E-38 1.7E-42 352.7 18.0 253 683-969 19-278 (342)
170 3is5_A Calcium-dependent prote 100.0 4.6E-38 1.6E-42 344.7 17.5 254 684-969 20-279 (285)
171 2jii_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 358.1 15.6 264 686-978 42-339 (352)
172 3lm5_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42 347.8 21.5 260 681-969 23-288 (327)
173 3c1x_A Hepatocyte growth facto 100.0 4E-38 1.4E-42 357.6 17.2 261 686-977 89-357 (373)
174 3oz6_A Mitogen-activated prote 100.0 6.4E-38 2.2E-42 359.6 18.8 206 682-906 5-234 (388)
175 3f66_A Hepatocyte growth facto 100.0 1.5E-37 5.3E-42 343.1 21.2 260 686-976 25-292 (298)
176 2x4f_A Myosin light chain kina 100.0 7.8E-38 2.7E-42 355.5 19.3 248 690-969 93-343 (373)
177 2vd5_A DMPK protein; serine/th 100.0 5E-38 1.7E-42 359.9 17.6 257 686-969 61-328 (412)
178 1xbb_A Tyrosine-protein kinase 100.0 1E-37 3.6E-42 343.1 19.5 262 686-979 16-283 (291)
179 2v62_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 357.9 13.9 273 686-973 37-326 (345)
180 2rku_A Serine/threonine-protei 100.0 6.5E-38 2.2E-42 345.4 17.9 252 685-969 14-266 (294)
181 3sv0_A Casein kinase I-like; t 100.0 4.2E-37 1.4E-41 359.0 25.6 264 685-977 6-280 (483)
182 3bhy_A Death-associated protei 100.0 2.5E-37 8.6E-42 338.7 22.3 258 685-969 4-266 (283)
183 2owb_A Serine/threonine-protei 100.0 5E-38 1.7E-42 352.9 17.1 252 685-969 40-292 (335)
184 2vgo_A Serine/threonine-protei 100.0 6.7E-38 2.3E-42 343.4 17.7 249 686-969 14-263 (284)
185 3pls_A Macrophage-stimulating 100.0 1.9E-37 6.4E-42 342.5 21.4 261 687-977 22-289 (298)
186 2a19_B Interferon-induced, dou 100.0 8.6E-38 3E-42 342.5 18.4 253 683-978 8-277 (284)
187 2h8h_A Proto-oncogene tyrosine 100.0 2.4E-38 8.3E-43 377.0 14.6 255 686-974 267-522 (535)
188 4hgt_A Casein kinase I isoform 100.0 3.5E-37 1.2E-41 339.9 22.8 266 684-978 7-283 (296)
189 3gxj_A TGF-beta receptor type- 100.0 3.2E-39 1.1E-43 357.6 6.4 260 686-975 3-297 (303)
190 1byg_A CSK, protein (C-termina 100.0 5.7E-38 2E-42 342.8 16.3 253 685-976 20-274 (278)
191 3i6u_A CDS1, serine/threonine- 100.0 6.3E-38 2.1E-42 362.4 17.5 263 682-969 131-400 (419)
192 3g33_A Cell division protein k 100.0 1.1E-37 3.8E-42 345.9 18.8 268 685-969 8-297 (308)
193 2wtk_C Serine/threonine-protei 100.0 1.3E-37 4.4E-42 345.0 19.0 257 684-969 3-264 (305)
194 1u5q_A Serine/threonine protei 100.0 9.8E-38 3.4E-42 351.4 17.7 250 685-969 53-306 (348)
195 1vzo_A Ribosomal protein S6 ki 100.0 4.3E-38 1.5E-42 355.9 14.8 259 685-970 53-323 (355)
196 2h6d_A 5'-AMP-activated protei 100.0 1E-37 3.5E-42 340.4 16.9 250 686-969 11-262 (276)
197 2y7j_A Phosphorylase B kinase 100.0 4.5E-37 1.5E-41 348.8 22.8 263 682-969 90-360 (365)
198 2ac3_A MAP kinase-interacting 100.0 1.1E-37 3.6E-42 347.5 17.2 255 686-969 12-296 (316)
199 3uzp_A CKI-delta, CKID, casein 100.0 6.1E-37 2.1E-41 338.0 23.0 265 685-978 8-283 (296)
200 4fvq_A Tyrosine-protein kinase 100.0 9.9E-38 3.4E-42 343.0 16.5 250 686-974 8-274 (289)
201 1ogq_A PGIP-2, polygalacturona 100.0 2.7E-38 9.2E-43 350.8 11.7 275 3-330 19-302 (313)
202 2ozo_A Tyrosine-protein kinase 100.0 2.2E-37 7.5E-42 373.9 20.5 253 693-977 343-600 (613)
203 1fvr_A Tyrosine-protein kinase 100.0 2.1E-37 7.1E-42 346.9 18.7 260 686-978 25-303 (327)
204 3g2f_A Bone morphogenetic prot 100.0 6.8E-38 2.3E-42 352.4 14.7 273 685-978 12-321 (336)
205 3mtl_A Cell division protein k 100.0 5.5E-38 1.9E-42 350.7 13.8 262 686-969 2-282 (324)
206 3mwu_A Calmodulin-domain prote 100.0 5E-37 1.7E-41 362.7 22.0 255 683-969 19-277 (486)
207 1o6v_A Internalin A; bacterial 100.0 1.4E-36 4.8E-41 357.2 25.4 346 52-453 44-389 (466)
208 3rp9_A Mitogen-activated prote 100.0 1.9E-37 6.4E-42 363.8 17.9 196 686-899 53-280 (458)
209 3lij_A Calcium/calmodulin depe 100.0 7E-37 2.4E-41 362.0 22.8 256 682-969 33-292 (494)
210 2jam_A Calcium/calmodulin-depe 100.0 5.6E-37 1.9E-41 339.6 20.6 253 683-969 6-262 (304)
211 1t4h_A Serine/threonine-protei 100.0 6.8E-37 2.3E-41 336.5 20.8 250 686-969 26-283 (290)
212 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.5E-37 8.4E-42 346.3 17.5 266 683-969 31-319 (329)
213 3a7i_A MST3 kinase, serine/thr 100.0 4.2E-37 1.5E-41 340.4 19.3 251 685-970 21-272 (303)
214 3nyv_A Calmodulin-domain prote 100.0 3.2E-37 1.1E-41 364.5 19.5 255 684-969 24-282 (484)
215 4fl3_A Tyrosine-protein kinase 100.0 2.7E-37 9.2E-42 373.9 19.2 252 692-975 375-631 (635)
216 1cm8_A Phosphorylated MAP kina 100.0 3E-37 1E-41 350.4 18.2 260 685-969 24-308 (367)
217 3nsz_A CK II alpha, casein kin 100.0 1.1E-36 3.9E-41 341.5 22.6 254 686-969 36-320 (330)
218 2ycf_A Serine/threonine-protei 100.0 1.1E-36 3.6E-41 340.3 22.2 263 682-969 6-275 (322)
219 3q5i_A Protein kinase; CDPK, m 100.0 9.4E-37 3.2E-41 361.9 22.8 266 683-969 33-302 (504)
220 1ua2_A CAK, cell division prot 100.0 3.5E-37 1.2E-41 347.6 18.2 272 681-969 5-292 (346)
221 3eqc_A Dual specificity mitoge 100.0 3.1E-37 1.1E-41 350.4 17.8 200 686-906 33-233 (360)
222 3pfq_A PKC-B, PKC-beta, protei 100.0 1.4E-37 4.9E-42 378.9 16.1 252 685-969 340-598 (674)
223 3ll6_A Cyclin G-associated kin 100.0 1.5E-37 5.1E-42 349.7 14.8 256 686-976 28-309 (337)
224 1x8b_A WEE1HU, WEE1-like prote 100.0 4.3E-37 1.5E-41 337.7 18.2 248 684-969 9-280 (289)
225 2r3i_A Cell division protein k 100.0 8E-37 2.7E-41 337.6 19.8 265 686-969 3-284 (299)
226 3n9x_A Phosphotransferase; mal 100.0 9.6E-37 3.3E-41 354.2 21.4 203 684-904 24-253 (432)
227 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-36 4E-41 354.8 22.0 361 93-578 33-393 (457)
228 2buj_A Serine/threonine-protei 100.0 1.8E-37 6E-42 345.9 14.4 259 686-973 29-304 (317)
229 2w5a_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 340.3 12.6 255 685-970 5-269 (279)
230 4aaa_A Cyclin-dependent kinase 100.0 4.5E-37 1.5E-41 344.7 17.2 265 685-969 24-307 (331)
231 2id5_A Lingo-1, leucine rich r 100.0 1.2E-36 4.2E-41 359.5 21.4 345 203-599 15-360 (477)
232 3byv_A Rhoptry kinase; malaria 100.0 1.5E-37 5.1E-42 354.9 13.0 251 685-975 72-368 (377)
233 2w1i_A JAK2; chromosomal rearr 100.0 1.2E-36 4E-41 340.5 19.9 269 686-977 41-324 (326)
234 3kvw_A DYRK2, dual specificity 100.0 5.3E-37 1.8E-41 355.5 17.4 198 685-906 96-302 (429)
235 3com_A Serine/threonine-protei 100.0 1.1E-36 3.8E-41 339.0 19.3 253 683-969 26-279 (314)
236 1u46_A ACK-1, activated CDC42 100.0 2E-37 6.9E-42 340.9 13.1 261 686-975 18-284 (291)
237 3mi9_A Cell division protein k 100.0 1.9E-36 6.6E-41 342.6 21.1 266 685-969 16-312 (351)
238 1o6v_A Internalin A; bacterial 100.0 5.5E-36 1.9E-40 352.2 25.7 348 148-575 44-391 (466)
239 2xrw_A Mitogen-activated prote 100.0 1.7E-36 5.7E-41 345.3 20.5 260 685-969 24-319 (371)
240 2pml_X PFPK7, Ser/Thr protein 100.0 4.1E-37 1.4E-41 347.8 14.9 276 685-969 30-323 (348)
241 2clq_A Mitogen-activated prote 100.0 2.9E-36 9.7E-41 332.4 20.9 252 687-969 23-279 (295)
242 3eb0_A Putative uncharacterize 100.0 1.4E-36 4.7E-41 347.7 18.3 260 684-969 5-322 (383)
243 4e7w_A Glycogen synthase kinas 100.0 9.6E-37 3.3E-41 349.7 17.0 260 685-969 39-322 (394)
244 3rgf_A Cyclin-dependent kinase 100.0 4.6E-37 1.6E-41 354.4 14.4 201 686-906 20-239 (405)
245 2vwi_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 341.4 12.4 261 685-969 14-288 (303)
246 2j7t_A Serine/threonine-protei 100.0 7.2E-37 2.5E-41 338.5 15.0 254 684-969 17-276 (302)
247 3qyz_A Mitogen-activated prote 100.0 3.6E-36 1.2E-40 341.8 21.1 264 685-969 26-314 (364)
248 3cek_A Dual specificity protei 100.0 1.5E-36 5.2E-41 337.6 17.5 253 686-969 28-293 (313)
249 3e3p_A Protein kinase, putativ 100.0 2.3E-36 7.8E-41 343.4 19.0 266 681-969 18-315 (360)
250 2fst_X Mitogen-activated prote 100.0 5.7E-37 2E-41 347.5 13.9 259 685-969 28-312 (367)
251 1j1b_A Glycogen synthase kinas 100.0 1.6E-36 5.5E-41 350.7 17.9 258 686-969 54-337 (420)
252 3q60_A ROP5B; pseudokinase, tr 100.0 2.7E-37 9.3E-42 352.1 11.0 257 686-969 62-353 (371)
253 3fme_A Dual specificity mitoge 100.0 2.1E-36 7E-41 332.7 17.7 255 685-969 6-267 (290)
254 2x7f_A TRAF2 and NCK-interacti 100.0 1.8E-36 6.1E-41 339.2 17.4 253 684-969 22-287 (326)
255 2wei_A Calmodulin-domain prote 100.0 5.6E-36 1.9E-40 328.6 21.1 256 682-969 18-277 (287)
256 2id5_A Lingo-1, leucine rich r 100.0 2.8E-36 9.6E-41 356.4 19.7 347 179-577 15-361 (477)
257 1phk_A Phosphorylase kinase; g 100.0 4.3E-36 1.5E-40 331.5 19.4 263 683-969 14-284 (298)
258 1z57_A Dual specificity protei 100.0 3.9E-36 1.3E-40 338.4 19.4 258 686-969 14-329 (339)
259 2j0j_A Focal adhesion kinase 1 100.0 3E-36 1E-40 366.1 19.9 260 685-977 389-653 (656)
260 1wak_A Serine/threonine-protei 100.0 2.9E-36 9.8E-41 347.6 18.6 261 686-969 37-392 (397)
261 3o6n_A APL1; leucine-rich repe 100.0 9.1E-36 3.1E-40 342.2 22.4 337 197-600 43-379 (390)
262 3an0_A Dual specificity mitoge 100.0 1.6E-36 5.4E-41 341.8 15.7 253 686-969 51-311 (340)
263 4exu_A Mitogen-activated prote 100.0 3.3E-36 1.1E-40 342.9 18.1 259 685-969 41-324 (371)
264 1blx_A Cyclin-dependent kinase 100.0 6.5E-36 2.2E-40 334.7 19.4 262 685-969 10-297 (326)
265 3pg1_A Mitogen-activated prote 100.0 2.2E-36 7.7E-41 343.7 15.8 276 682-969 18-317 (362)
266 2vx3_A Dual specificity tyrosi 100.0 1.1E-35 3.7E-40 340.2 21.2 200 685-906 53-261 (382)
267 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.5E-36 5.1E-41 338.8 13.2 260 685-977 32-304 (319)
268 2b9h_A MAP kinase FUS3, mitoge 100.0 8.8E-36 3E-40 337.6 19.2 263 685-969 10-306 (353)
269 3fhr_A MAP kinase-activated pr 100.0 4.9E-36 1.7E-40 336.5 16.8 254 684-969 26-288 (336)
270 1zy4_A Serine/threonine-protei 100.0 9.4E-36 3.2E-40 329.6 18.4 254 684-969 4-284 (303)
271 2i6l_A Mitogen-activated prote 100.0 8.7E-36 3E-40 332.7 16.5 261 685-969 10-306 (320)
272 2eu9_A Dual specificity protei 100.0 1.8E-35 6.2E-40 335.3 19.0 259 685-969 18-334 (355)
273 2iwi_A Serine/threonine-protei 100.0 7.5E-36 2.6E-40 331.9 15.1 251 681-969 26-284 (312)
274 3oja_B Anopheles plasmodium-re 100.0 3.1E-35 1.1E-39 356.4 21.2 336 198-600 50-385 (597)
275 2rio_A Serine/threonine-protei 100.0 9.7E-36 3.3E-40 345.7 16.0 253 686-969 15-296 (434)
276 3a99_A Proto-oncogene serine/t 100.0 6.3E-36 2.1E-40 333.4 13.1 247 685-969 42-294 (320)
277 3coi_A Mitogen-activated prote 100.0 3.3E-35 1.1E-39 332.6 18.9 258 686-969 24-306 (353)
278 3p23_A Serine/threonine-protei 100.0 1.5E-35 5E-40 343.0 16.3 250 686-969 24-284 (432)
279 1q8y_A SR protein kinase; tran 100.0 1.5E-35 5.3E-40 338.3 15.9 261 686-969 19-334 (373)
280 3uqc_A Probable conserved tran 100.0 3.3E-35 1.1E-39 321.2 17.4 236 686-977 31-267 (286)
281 3aln_A Dual specificity mitoge 100.0 3.2E-35 1.1E-39 329.1 17.6 256 686-969 22-286 (327)
282 2dyl_A Dual specificity mitoge 100.0 2.1E-35 7.2E-40 329.3 14.2 254 685-969 24-284 (318)
283 3o6n_A APL1; leucine-rich repe 100.0 4.9E-35 1.7E-39 336.1 16.9 351 7-430 2-354 (390)
284 3qa8_A MGC80376 protein; kinas 100.0 2.1E-35 7.2E-40 350.9 12.1 262 683-967 11-296 (676)
285 2pzi_A Probable serine/threoni 100.0 2E-34 6.7E-39 354.2 20.8 242 686-976 80-329 (681)
286 3dzo_A Rhoptry kinase domain; 100.0 1.1E-34 3.9E-39 334.4 16.1 251 686-976 78-373 (413)
287 3oja_B Anopheles plasmodium-re 100.0 3.7E-34 1.3E-38 346.9 18.1 351 5-430 6-360 (597)
288 3m2w_A MAP kinase-activated pr 100.0 7.2E-34 2.5E-38 313.7 17.2 233 683-969 14-257 (299)
289 4fmz_A Internalin; leucine ric 100.0 2.1E-32 7.1E-37 309.0 23.0 260 50-331 40-299 (347)
290 2vuw_A Serine/threonine-protei 100.0 7.7E-34 2.6E-38 319.0 10.6 251 685-969 19-332 (336)
291 4fmz_A Internalin; leucine ric 100.0 3.7E-32 1.3E-36 307.0 24.4 308 194-572 39-346 (347)
292 1ogq_A PGIP-2, polygalacturona 100.0 2E-32 6.9E-37 303.5 15.1 259 271-604 50-313 (313)
293 2ft3_A Biglycan; proteoglycan, 100.0 2.7E-31 9.1E-36 297.7 21.1 288 176-498 34-331 (332)
294 1xku_A Decorin; proteoglycan, 100.0 2.6E-31 8.9E-36 297.6 20.9 255 18-316 30-284 (330)
295 2ft3_A Biglycan; proteoglycan, 100.0 2.6E-31 8.7E-36 297.9 20.5 270 54-364 54-331 (332)
296 1xku_A Decorin; proteoglycan, 100.0 7E-31 2.4E-35 294.1 22.0 279 19-329 38-329 (330)
297 4fcg_A Uncharacterized protein 100.0 9.6E-32 3.3E-36 299.8 8.7 265 7-333 46-315 (328)
298 1z7x_W Ribonuclease inhibitor; 100.0 2.8E-33 9.6E-38 329.3 -9.2 384 175-573 3-441 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.2E-33 4.1E-38 332.6 -14.8 259 77-366 2-297 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 6.6E-30 2.2E-34 289.0 14.0 284 10-309 22-315 (353)
301 3ogk_B Coronatine-insensitive 100.0 4.2E-32 1.4E-36 330.1 -12.8 141 17-161 40-203 (592)
302 2z66_A Variable lymphocyte rec 100.0 3.2E-29 1.1E-33 277.4 11.0 253 17-310 5-263 (306)
303 2z66_A Variable lymphocyte rec 100.0 2.6E-28 9E-33 270.1 14.6 85 416-500 127-212 (306)
304 4azs_A Methyltransferase WBDD; 100.0 2.8E-29 9.7E-34 299.0 6.5 195 693-902 241-437 (569)
305 2z80_A TOLL-like receptor 2, v 99.9 6.1E-28 2.1E-32 272.8 13.2 271 55-330 32-312 (353)
306 3ogk_B Coronatine-insensitive 99.9 2.6E-30 8.9E-35 314.3 -8.3 347 174-569 163-548 (592)
307 3zyi_A Leucine-rich repeat-con 99.9 4.3E-27 1.5E-31 275.2 18.9 227 248-500 76-303 (452)
308 3zyj_A Leucine-rich repeat-con 99.9 5.5E-27 1.9E-31 273.3 18.6 227 248-500 65-292 (440)
309 3g06_A SSPH2 (leucine-rich rep 99.9 4.6E-28 1.6E-32 290.3 9.4 297 7-400 11-307 (622)
310 4fcg_A Uncharacterized protein 99.9 4.9E-27 1.7E-31 261.7 17.1 237 77-368 80-316 (328)
311 1ozn_A Reticulon 4 receptor; N 99.9 1.2E-26 4.3E-31 253.7 17.8 253 274-578 14-267 (285)
312 1ozn_A Reticulon 4 receptor; N 99.9 6.5E-27 2.2E-31 256.0 14.9 255 202-484 14-269 (285)
313 3zyj_A Leucine-rich repeat-con 99.9 1.6E-26 5.6E-31 269.3 18.4 246 202-476 46-292 (440)
314 3zyi_A Leucine-rich repeat-con 99.9 1.6E-26 5.5E-31 270.4 17.7 246 202-476 57-303 (452)
315 1wwl_A Monocyte differentiatio 99.9 2.8E-27 9.5E-32 262.2 9.6 250 97-391 38-310 (312)
316 1wwl_A Monocyte differentiatio 99.9 1.3E-27 4.6E-32 264.8 6.3 252 121-430 38-311 (312)
317 3g06_A SSPH2 (leucine-rich rep 99.9 2E-25 6.9E-30 267.4 24.3 267 177-511 42-308 (622)
318 3o53_A Protein LRIM1, AGAP0063 99.9 1.5E-27 5.1E-32 265.0 5.2 253 252-567 15-270 (317)
319 3o53_A Protein LRIM1, AGAP0063 99.9 2E-27 6.8E-32 264.1 4.8 268 177-482 12-282 (317)
320 3oja_A Leucine-rich immune mol 99.9 2.1E-26 7.1E-31 270.8 9.8 218 269-572 32-250 (487)
321 2p1m_B Transport inhibitor res 99.9 8.9E-30 3E-34 309.7 -21.8 439 17-500 33-519 (594)
322 3en9_A Glycoprotease, O-sialog 99.9 1.1E-25 3.8E-30 266.6 9.3 194 689-904 339-539 (540)
323 2o6q_A Variable lymphocyte rec 99.9 2.5E-24 8.6E-29 233.2 16.3 217 17-237 3-219 (270)
324 2p1m_B Transport inhibitor res 99.9 3.9E-28 1.3E-32 295.3 -15.9 430 74-573 62-545 (594)
325 3oja_A Leucine-rich immune mol 99.9 4E-25 1.4E-29 259.9 9.4 223 350-598 31-253 (487)
326 2z62_A TOLL-like receptor 4, v 99.9 1.2E-23 4.2E-28 228.7 19.8 213 353-580 28-245 (276)
327 2z62_A TOLL-like receptor 4, v 99.9 5.3E-24 1.8E-28 231.6 15.0 214 214-453 21-238 (276)
328 2o6q_A Variable lymphocyte rec 99.9 1.2E-22 4E-27 220.0 20.7 203 272-501 17-219 (270)
329 3rfs_A Internalin B, repeat mo 99.9 5.1E-23 1.7E-27 223.1 16.7 202 245-500 17-218 (272)
330 1p9a_G Platelet glycoprotein I 99.9 9.3E-23 3.2E-27 222.7 18.9 203 267-500 6-208 (290)
331 2ast_B S-phase kinase-associat 99.9 3.6E-25 1.2E-29 248.4 -2.3 268 17-317 35-315 (336)
332 3rfs_A Internalin B, repeat mo 99.9 3.9E-23 1.3E-27 224.0 11.6 166 219-401 81-246 (272)
333 1p9a_G Platelet glycoprotein I 99.9 2.4E-22 8.2E-27 219.5 17.6 180 353-574 31-210 (290)
334 3goz_A Leucine-rich repeat-con 99.9 6.9E-24 2.4E-28 240.2 2.8 104 37-140 5-123 (362)
335 3goz_A Leucine-rich repeat-con 99.9 1.2E-23 4.1E-28 238.2 2.4 263 58-368 2-299 (362)
336 1h6u_A Internalin H; cell adhe 99.9 4.7E-22 1.6E-26 219.5 12.8 217 246-505 18-234 (308)
337 4glp_A Monocyte differentiatio 99.9 3.5E-22 1.2E-26 221.0 11.7 206 223-476 91-307 (310)
338 3m19_A Variable lymphocyte rec 99.9 1.2E-21 4.1E-26 209.6 15.2 192 17-238 3-194 (251)
339 4glp_A Monocyte differentiatio 99.9 3.1E-22 1E-26 221.5 10.6 231 224-500 65-307 (310)
340 2xwt_C Thyrotropin receptor; s 99.9 4.4E-22 1.5E-26 211.4 11.1 196 272-497 32-236 (239)
341 2xwt_C Thyrotropin receptor; s 99.9 8.2E-22 2.8E-26 209.3 12.9 196 354-569 32-236 (239)
342 2ca6_A RAN GTPase-activating p 99.9 9.4E-24 3.2E-28 241.6 -4.1 242 45-311 23-319 (386)
343 2ca6_A RAN GTPase-activating p 99.9 1.7E-24 5.9E-29 247.7 -10.8 248 60-333 15-317 (386)
344 1zar_A RIO2 kinase; serine kin 99.9 3.6E-22 1.2E-26 216.5 7.3 158 687-876 91-252 (282)
345 4ay9_X Follicle-stimulating ho 99.8 3.6E-21 1.2E-25 216.6 15.2 240 227-498 13-257 (350)
346 1h6u_A Internalin H; cell adhe 99.8 3.5E-21 1.2E-25 212.5 14.2 208 276-573 24-231 (308)
347 3m19_A Variable lymphocyte rec 99.8 1.1E-20 3.7E-25 202.2 17.0 183 354-578 15-198 (251)
348 2ast_B S-phase kinase-associat 99.8 2E-22 6.7E-27 226.1 2.4 215 171-399 89-315 (336)
349 4ay9_X Follicle-stimulating ho 99.8 1.1E-20 3.7E-25 212.7 13.8 225 354-596 31-259 (350)
350 2o6s_A Variable lymphocyte rec 99.8 7.3E-20 2.5E-24 189.7 14.2 184 17-222 5-188 (208)
351 3cvr_A Invasion plasmid antige 99.8 8.1E-21 2.8E-25 224.6 7.4 208 8-270 33-253 (571)
352 3cvr_A Invasion plasmid antige 99.8 6.2E-20 2.1E-24 217.0 14.5 189 272-512 60-255 (571)
353 2o6s_A Variable lymphocyte rec 99.8 1.2E-18 4.2E-23 180.4 16.9 181 274-488 10-190 (208)
354 1h6t_A Internalin B; cell adhe 99.8 4.7E-19 1.6E-23 193.6 10.5 191 246-476 23-213 (291)
355 2v9t_B SLIT homolog 2 protein 99.8 1.2E-18 3.9E-23 182.0 12.8 136 440-576 33-169 (220)
356 1m9s_A Internalin B; cell inva 99.8 7.8E-19 2.7E-23 210.1 12.6 191 246-476 20-210 (605)
357 1dce_A Protein (RAB geranylger 99.8 1.9E-20 6.4E-25 222.9 -2.4 199 75-308 346-546 (567)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 2.1E-18 7.1E-23 180.0 12.6 137 417-578 34-172 (220)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-18 8.7E-23 179.3 13.3 156 356-552 14-169 (220)
360 2xot_A Amphoterin-induced prot 99.8 2.7E-18 9.3E-23 193.9 13.2 180 356-573 21-203 (361)
361 1dce_A Protein (RAB geranylger 99.8 2.7E-20 9.2E-25 221.6 -3.5 218 50-302 345-567 (567)
362 2v9t_B SLIT homolog 2 protein 99.7 5E-18 1.7E-22 177.1 13.9 155 356-552 14-168 (220)
363 1m9s_A Internalin B; cell inva 99.7 1.3E-18 4.4E-23 208.2 10.7 182 244-463 40-221 (605)
364 1h6t_A Internalin B; cell adhe 99.7 1.9E-18 6.3E-23 188.8 11.1 190 79-309 25-214 (291)
365 3e6j_A Variable lymphocyte rec 99.7 9.1E-18 3.1E-22 176.4 15.6 139 7-161 8-146 (229)
366 4b8c_D Glucose-repressible alc 99.7 9E-19 3.1E-23 215.2 7.6 245 10-284 154-404 (727)
367 3e6j_A Variable lymphocyte rec 99.7 1.6E-17 5.4E-22 174.6 15.5 135 416-576 41-176 (229)
368 1zth_A RIO1 serine protein kin 99.7 3.8E-18 1.3E-22 182.7 10.3 150 688-851 49-219 (258)
369 1xeu_A Internalin C; cellular 99.7 2.7E-18 9.2E-23 184.4 8.7 171 245-454 17-187 (263)
370 2xot_A Amphoterin-induced prot 99.7 1.1E-17 3.7E-22 188.9 13.2 163 274-463 21-187 (361)
371 4b8c_D Glucose-repressible alc 99.7 4.3E-18 1.5E-22 209.1 8.5 151 414-573 246-405 (727)
372 1xeu_A Internalin C; cellular 99.7 6.5E-18 2.2E-22 181.4 6.4 170 197-391 17-186 (263)
373 4ezg_A Putative uncharacterize 99.7 2.5E-17 8.7E-22 168.7 8.9 107 196-306 41-147 (197)
374 1w8a_A SLIT protein; signaling 99.7 4.9E-17 1.7E-21 165.7 10.5 157 416-599 30-187 (192)
375 4ezg_A Putative uncharacterize 99.7 3.5E-17 1.2E-21 167.7 9.4 155 218-390 39-194 (197)
376 3sb4_A Hypothetical leucine ri 99.7 2.9E-17 9.8E-22 183.1 6.6 200 270-493 100-327 (329)
377 4gyi_A RIO2 kinase; protein ki 99.7 1.7E-17 5.9E-22 183.5 3.9 147 688-849 97-263 (397)
378 1w8a_A SLIT protein; signaling 99.7 2.3E-16 7.8E-21 160.8 11.5 135 356-506 11-145 (192)
379 3sb4_A Hypothetical leucine ri 99.6 5.5E-17 1.9E-21 180.8 5.3 252 198-470 48-328 (329)
380 4fdw_A Leucine rich hypothetic 99.6 8E-15 2.7E-19 166.7 16.8 271 198-500 112-383 (401)
381 2wfh_A SLIT homolog 2 protein 99.6 3.1E-15 1.1E-19 152.2 11.6 128 419-575 14-142 (193)
382 2ell_A Acidic leucine-rich nuc 99.6 1.5E-15 5E-20 151.2 8.9 134 415-575 24-163 (168)
383 2ell_A Acidic leucine-rich nuc 99.6 5.4E-15 1.8E-19 147.1 9.7 131 176-308 25-160 (168)
384 4fdw_A Leucine rich hypothetic 99.5 3.7E-14 1.3E-18 161.3 16.4 128 416-572 249-383 (401)
385 2je0_A Acidic leucine-rich nuc 99.5 5E-15 1.7E-19 144.1 7.8 128 415-568 17-149 (149)
386 2wfh_A SLIT homolog 2 protein 99.5 1.4E-14 4.9E-19 147.3 10.6 125 203-331 14-138 (193)
387 2o6r_A Variable lymphocyte rec 99.5 3.7E-14 1.3E-18 142.4 13.5 133 355-504 9-141 (177)
388 1a9n_A U2A', U2A'; complex (nu 99.5 4.2E-15 1.4E-19 149.1 4.5 134 412-573 16-154 (176)
389 2je0_A Acidic leucine-rich nuc 99.5 2E-14 7E-19 139.7 8.9 124 32-157 19-147 (149)
390 2o6r_A Variable lymphocyte rec 99.5 6.1E-14 2.1E-18 140.8 12.0 134 417-578 9-143 (177)
391 4fs7_A Uncharacterized protein 99.5 2.5E-13 8.7E-18 155.1 18.1 329 193-564 65-393 (394)
392 4fs7_A Uncharacterized protein 99.5 3.2E-13 1.1E-17 154.3 16.7 269 66-384 59-327 (394)
393 1a9n_A U2A', U2A'; complex (nu 99.5 3.8E-14 1.3E-18 142.1 5.9 134 195-334 15-155 (176)
394 1ds9_A Outer arm dynein; leuci 99.4 2E-15 7E-20 154.6 -5.2 155 50-236 14-185 (198)
395 1ds9_A Outer arm dynein; leuci 99.4 6.1E-15 2.1E-19 151.1 -3.2 153 76-260 16-185 (198)
396 3g39_A Variable lymphocyte rec 99.4 9.6E-13 3.3E-17 130.8 10.8 81 417-500 11-91 (170)
397 2r9u_A Variable lymphocyte rec 99.4 1.7E-12 5.7E-17 129.5 10.6 80 418-500 15-94 (174)
398 3g39_A Variable lymphocyte rec 99.3 2.2E-12 7.5E-17 128.2 10.7 88 415-502 30-117 (170)
399 2r9u_A Variable lymphocyte rec 99.3 4.3E-12 1.5E-16 126.5 11.6 92 415-507 33-124 (174)
400 4gt6_A Cell surface protein; l 99.3 5.2E-11 1.8E-15 135.8 19.4 327 191-571 55-390 (394)
401 3tm0_A Aminoglycoside 3'-phosp 99.2 1.8E-11 6E-16 131.4 10.5 146 682-849 10-212 (263)
402 2ifg_A High affinity nerve gro 99.2 1.9E-11 6.6E-16 137.0 9.6 106 419-552 12-119 (347)
403 3un9_A NLR family member X1; l 99.2 1.6E-13 5.5E-18 154.5 -9.3 42 349-390 207-252 (372)
404 3un9_A NLR family member X1; l 99.2 4.9E-13 1.7E-17 150.5 -5.9 190 78-308 72-283 (372)
405 4gt6_A Cell surface protein; l 99.2 2.4E-10 8.2E-15 130.4 16.2 317 144-499 57-390 (394)
406 2ifg_A High affinity nerve gro 99.1 2.8E-11 9.7E-16 135.6 7.0 108 19-139 8-116 (347)
407 1nd4_A Aminoglycoside 3'-phosp 99.1 2E-10 6.9E-15 123.0 8.6 129 695-850 29-214 (264)
408 3dxp_A Putative acyl-COA dehyd 99.0 1.1E-09 3.9E-14 123.1 11.8 142 691-850 43-248 (359)
409 4h09_A Hypothetical leucine ri 98.9 1.2E-08 4E-13 115.7 16.2 303 49-387 41-343 (379)
410 2ra8_A Uncharacterized protein 98.9 4.8E-10 1.7E-14 124.8 3.6 91 142-236 164-265 (362)
411 2ra8_A Uncharacterized protein 98.9 3E-10 1E-14 126.5 0.5 62 94-158 164-227 (362)
412 4h09_A Hypothetical leucine ri 98.9 6.5E-08 2.2E-12 109.5 19.6 60 411-471 282-341 (379)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 1.1E-09 3.7E-14 120.0 4.2 187 691-903 25-287 (304)
414 3rw6_A Nuclear RNA export fact 98.6 1.8E-09 6E-14 113.9 -2.7 20 18-37 77-97 (267)
415 3r70_A Aminoglycoside phosphot 98.6 1.6E-07 5.4E-12 103.5 12.1 136 687-850 38-237 (320)
416 3d1u_A Putative fructosamine-3 98.4 1.3E-06 4.3E-11 94.2 13.8 77 690-784 19-98 (288)
417 4gkh_A Aminoglycoside 3'-phosp 98.3 1.9E-06 6.4E-11 92.4 11.8 134 693-849 31-222 (272)
418 3rw6_A Nuclear RNA export fact 98.3 4.9E-08 1.7E-12 102.8 -0.8 98 405-504 131-237 (267)
419 3tdw_A Gentamicin resistance p 98.3 2.1E-06 7.3E-11 93.6 11.9 135 692-850 25-224 (306)
420 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.5E-06 8.4E-11 95.4 11.3 75 690-784 45-122 (362)
421 1io0_A Tropomodulin; LRR prote 98.3 1.6E-07 5.4E-12 94.2 1.1 89 412-500 33-136 (185)
422 1io0_A Tropomodulin; LRR prote 98.3 3.8E-08 1.3E-12 98.7 -3.4 117 45-161 27-162 (185)
423 3e4g_A ATP synthase subunit S, 98.2 2.5E-07 8.5E-12 90.2 1.2 84 54-137 61-150 (176)
424 3e4g_A ATP synthase subunit S, 98.2 5.4E-07 1.8E-11 87.8 2.4 86 78-163 61-152 (176)
425 3ats_A Putative uncharacterize 98.1 5.3E-06 1.8E-10 92.8 10.3 83 692-785 26-122 (357)
426 2q83_A YTAA protein; 2635576, 97.8 4.4E-05 1.5E-09 84.7 10.6 138 693-849 39-251 (346)
427 3jr1_A Putative fructosamine-3 97.8 8.8E-05 3E-09 80.4 12.6 137 691-846 41-232 (312)
428 2olc_A MTR kinase, methylthior 97.8 6.6E-05 2.3E-09 85.2 11.7 81 691-781 35-120 (397)
429 3f7w_A Putative fructosamine-3 97.6 0.00036 1.2E-08 75.1 12.9 79 687-783 16-97 (288)
430 2pyw_A Uncharacterized protein 97.5 0.00053 1.8E-08 78.2 12.5 77 820-900 232-313 (420)
431 3csv_A Aminoglycoside phosphot 97.2 0.0014 4.9E-08 72.0 11.9 31 820-850 183-217 (333)
432 3dxq_A Choline/ethanolamine ki 97.1 0.0011 3.7E-08 71.8 8.8 72 691-784 23-96 (301)
433 1zyl_A Hypothetical protein YI 97.0 0.0032 1.1E-07 69.0 12.4 140 693-850 33-223 (328)
434 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00016 5.3E-09 71.8 1.3 84 414-497 40-136 (197)
435 1pgv_A TMD-1, tropomodulin TMD 97.0 8.1E-05 2.8E-09 73.9 -1.0 117 267-389 37-169 (197)
436 2ppq_A HSK, HK, homoserine kin 96.9 0.0032 1.1E-07 68.8 10.4 141 692-849 28-216 (322)
437 3feg_A Choline/ethanolamine ki 96.8 0.0023 7.8E-08 71.2 9.1 140 692-850 56-254 (379)
438 1nw1_A Choline kinase (49.2 KD 96.8 0.0025 8.5E-08 72.6 9.3 72 692-783 79-159 (429)
439 2qg7_A Ethanolamine kinase PV0 96.7 0.0075 2.6E-07 68.9 12.1 73 692-783 114-188 (458)
440 3c5i_A Choline kinase; choline 96.6 0.0037 1.3E-07 69.8 8.5 73 692-783 39-121 (369)
441 3i1a_A Spectinomycin phosphotr 96.4 0.01 3.5E-07 65.2 10.2 31 820-850 206-236 (339)
442 3rfe_A Platelet glycoprotein I 96.2 0.0062 2.1E-07 56.3 6.1 24 527-550 46-69 (130)
443 3rfe_A Platelet glycoprotein I 96.1 0.0053 1.8E-07 56.8 5.2 36 465-500 33-68 (130)
444 3f2s_A CK, chetk-alpha, cholin 95.2 0.054 1.9E-06 60.3 9.8 152 692-849 58-279 (401)
445 2yle_A Protein spire homolog 1 94.8 0.17 5.8E-06 50.3 11.0 102 782-902 34-135 (229)
446 3mes_A Choline kinase; malaria 94.6 0.13 4.5E-06 57.8 10.9 73 692-783 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 88.0 1.7 5.8E-05 48.5 10.3 30 821-850 245-280 (401)
448 4ano_A ESSB; membrane protein, 84.9 2.7 9.4E-05 41.8 8.6 83 754-848 48-131 (219)
449 4ann_A ESSB; membrane protein, 84.7 1.9 6.5E-05 42.8 7.3 116 754-904 43-158 (215)
450 3cxl_A N-chimerin; SH2, RHO-GA 71.2 0.44 1.5E-05 54.3 -2.3 62 691-767 147-215 (463)
451 2l2t_A Receptor tyrosine-prote 48.6 29 0.00098 24.6 4.5 9 627-635 12-20 (44)
452 2jwa_A Receptor tyrosine-prote 40.6 38 0.0013 23.9 4.1 6 645-650 34-39 (44)
453 2l2t_A Receptor tyrosine-prote 37.7 53 0.0018 23.2 4.4 29 624-652 12-40 (44)
454 2k9y_A Ephrin type-A receptor 35.8 28 0.00097 24.0 3.0 13 627-639 15-27 (41)
455 1cja_A Protein (actin-fragmin 34.7 99 0.0034 32.7 8.2 78 770-849 156-236 (342)
456 2ks1_B Epidermal growth factor 34.7 57 0.002 23.1 4.3 30 627-656 13-42 (44)
457 2lz0_A Uncharacterized protein 33.9 75 0.0026 27.0 6.1 46 259-305 8-53 (100)
458 2lz0_A Uncharacterized protein 33.6 47 0.0016 28.3 4.7 46 282-328 7-52 (100)
459 3ox7_P MH027; urokinase-type p 21.6 30 0.001 19.6 0.7 9 17-25 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.7e-77 Score=744.43 Aligned_cols=595 Identities=35% Similarity=0.550 Sum_probs=470.3
Q ss_pred CCCcccCCCCCCCCCCccceeEEeCCCCcEEEEEecCCccccc---CCcC-----------------------CCCCccc
Q 039419 3 SIPSALSNWNPSDSNPCKWSHITCSPQNFVTEINIQSIELELP---FPSN-----------------------LSSLSFL 56 (1035)
Q Consensus 3 ~~~~~l~~w~~~~~~~c~w~gi~c~~~~~v~~l~~~~~~~~~~---~~~~-----------------------~~~l~~L 56 (1035)
.+|.+|++|+.+ .+||+|+||+|+ .++|++|+++++++.|. +|+. ++.+++|
T Consensus 25 ~~~~~l~~W~~~-~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L 102 (768)
T 3rgz_A 25 PDKNLLPDWSSN-KNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASL 102 (768)
T ss_dssp SCTTSSTTCCTT-SCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTC
T ss_pred CCcccccCCCCC-CCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcCCCchhhccCCCC
Confidence 367789999854 589999999999 78999999999999887 5554 4555555
Q ss_pred ceEeecCcccCCCCCC--CCCCCCCCceeeCCCCCCCCCCChhh-hccccccceEecccCCCCCCchh---hhhhccccc
Q 039419 57 QKLIISGSNLTGPISP--DLGDCTQLTTIDVSSNSLVGGVPSSI-GKLINLQDLILNSNQLTGEIPKE---LGACIKLKN 130 (1035)
Q Consensus 57 ~~L~L~~~~l~~~~~~--~~~~l~~L~~L~ls~n~l~~~~p~~i-~~l~~L~~L~L~~n~l~~~~p~~---l~~l~~L~~ 130 (1035)
++|+|++|.++|.+|. .++.+++|++|+|++|.+.+.+|..+ .++++|++|+|++|++++..|.. +..+++|++
T Consensus 103 ~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~ 182 (768)
T 3rgz_A 103 TSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKH 182 (768)
T ss_dssp CEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCE
T ss_pred CEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCE
Confidence 5555555555555554 55555555555555555555555443 45555555555555555444444 455555555
Q ss_pred eeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccc
Q 039419 131 LLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTM 210 (1035)
Q Consensus 131 L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~ 210 (1035)
|++++|.+.+..|. +.+++|++|++++|. +.+.+|. ++.+++|++|++++|.+.+..|..++.+++|++|++++|.
T Consensus 183 L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~-l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 258 (768)
T 3rgz_A 183 LAISGNKISGDVDV--SRCVNLEFLDVSSNN-FSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 258 (768)
T ss_dssp EECCSSEEESCCBC--TTCTTCCEEECCSSC-CCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSC
T ss_pred EECCCCcccccCCc--ccCCcCCEEECcCCc-CCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCc
Confidence 55555555543332 566677777777665 4444554 7777777777777777777777777777777777777777
Q ss_pred cccCCccccccCcCCceEEecCCcCCCCCChhhhcc-cchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCc
Q 039419 211 LSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKL-QKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQ 289 (1035)
Q Consensus 211 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~ 289 (1035)
+.+.+|.. .+++|++|+|++|.+++.+|..+..+ ++|++|++++|++.+.+|..|+++++|++|+|++|++++.+|.
T Consensus 259 l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~ 336 (768)
T 3rgz_A 259 FVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336 (768)
T ss_dssp CEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCH
T ss_pred ccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCH
Confidence 77666654 66777777777777777777777664 7788888888888777788888888888888888888766665
Q ss_pred c-ccCCCCCcEEEccCCccccCCCCcccCCC-ccceeccccchhh----------------hhhhhccccCCCCCcCCCC
Q 039419 290 S-FGNLSSLEELMLSNNNISGSIPPVLSNAT-SLLQLQLDTNQIS----------------VFFAWQNKLEGSIPSTLAN 351 (1035)
Q Consensus 290 ~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~----------------~l~~~~n~l~~~~p~~l~~ 351 (1035)
. |.++++|++|++++|++.+..|..+.+++ +|++|++++|+++ .+...+|.+.+.+|..+.+
T Consensus 337 ~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~ 416 (768)
T 3rgz_A 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 416 (768)
T ss_dssp HHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGG
T ss_pred HHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhc
Confidence 4 77888888888888888777777777776 7888888777653 2334456777788899999
Q ss_pred CCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeee----------ccCCCCccceee
Q 039419 352 CRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLM----------SFGNCTQLQMLN 421 (1035)
Q Consensus 352 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~----------~~~~l~~L~~L~ 421 (1035)
+++|++|+|++|.+++..|..+..+++|++|++++|++++.+|..+..+++|+.|++. .|.++++|++|+
T Consensus 417 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 496 (768)
T 3rgz_A 417 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 496 (768)
T ss_dssp CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred CCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEE
Confidence 9999999999999998999999999999999999999999999999999999999874 367789999999
Q ss_pred cCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccc-------------------
Q 039419 422 LSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSS------------------- 482 (1035)
Q Consensus 422 L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~------------------- 482 (1035)
|++|++++.+|.++..+++|++|+|++|++++.+|..+..+++|+.|++++|++++.+|..
T Consensus 497 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~ 576 (768)
T 3rgz_A 497 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEE
T ss_pred ccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccc
Confidence 9999999999999999999999999999999999999999999999999999988766653
Q ss_pred ---------------------------------------------------cCCCCCCcEEEcCCCcCcCccchhhhhhc
Q 039419 483 ---------------------------------------------------LGRCESLQSLDLSSNKLSGKIPVELFEIE 511 (1035)
Q Consensus 483 ---------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 511 (1035)
+..+++|++|||++|+++|.+|..+..+.
T Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~ 656 (768)
T 3rgz_A 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 656 (768)
T ss_dssp EEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCT
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccc
Confidence 34467899999999999999999999888
Q ss_pred cCcceeeccCccCCCCCCccccCCccccEEeccCCcccC-ccccccccCCCcEEeccCCcCcccCCChhhhhcccccccc
Q 039419 512 GLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGG-DLLALSGLDNLVSLNVSYNNFTGYLPDSKLFRQLSATEMA 590 (1035)
Q Consensus 512 ~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~ 590 (1035)
.+. .|+|++|+++|.+|..|+.+++|++|||++|++++ .|..+..+++|++|+|++|+|+|.+|....|.++....+.
T Consensus 657 ~L~-~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~ 735 (768)
T 3rgz_A 657 YLF-ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFL 735 (768)
T ss_dssp TCC-EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGC
T ss_pred cCC-EEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhc
Confidence 776 79999999999999999999999999999999997 4578999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcCC
Q 039419 591 GNQGLCSRGHESCFLS 606 (1035)
Q Consensus 591 ~N~~~c~~~~~~c~~~ 606 (1035)
||+++||.|...|...
T Consensus 736 gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 736 NNPGLCGYPLPRCDPS 751 (768)
T ss_dssp SCTEEESTTSCCCCSC
T ss_pred CCchhcCCCCcCCCCC
Confidence 9999999998888654
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.8e-62 Score=612.77 Aligned_cols=538 Identities=33% Similarity=0.477 Sum_probs=480.6
Q ss_pred cccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCCh--hhhccccccceEecccCCCCCCchhh-hhhccccc
Q 039419 54 SFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPS--SIGKLINLQDLILNSNQLTGEIPKEL-GACIKLKN 130 (1035)
Q Consensus 54 ~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~--~i~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~ 130 (1035)
++|+.++++.+.+. .+|+.++.+++|++|||++|.+.|.+|. .++++++|++|+|++|.+++.+|..+ ..+++|++
T Consensus 77 ~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 77 TGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp TTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred CcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 34555555555554 3568899999999999999999988998 99999999999999999998888776 88999999
Q ss_pred eeccccccCCCCchh---hccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeec
Q 039419 131 LLLFDNYLSGNLPVE---LGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVY 207 (1035)
Q Consensus 131 L~l~~n~l~~~~p~~---l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~ 207 (1035)
|+|++|.+++..|.. ++++++|++|++++|. +.+..+ +..+++|++|++++|.+.+..|. ++++++|++|+++
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls 231 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNK-ISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDIS 231 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSE-EESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECC
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCc-ccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECc
Confidence 999999999888877 8899999999999997 444444 38899999999999999988887 9999999999999
Q ss_pred ccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCC-CCCcEEEccCccCCCC
Q 039419 208 TTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNC-KSLKTIDLSLNFFSGS 286 (1035)
Q Consensus 208 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l-~~L~~L~L~~n~l~~~ 286 (1035)
+|.+++.+|..+.++++|++|+|++|.+++.+|.. .+++|++|++++|++.+.+|..+..+ ++|++|+|++|++++.
T Consensus 232 ~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~ 309 (768)
T 3rgz_A 232 GNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309 (768)
T ss_dssp SSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEEC
T ss_pred CCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCc
Confidence 99999999999999999999999999999887765 89999999999999999999998875 9999999999999999
Q ss_pred CCccccCCCCCcEEEccCCccccCCCCc-ccCCCccceeccccchhh---------------hhhhhccccCCCCCcCCC
Q 039419 287 LPQSFGNLSSLEELMLSNNNISGSIPPV-LSNATSLLQLQLDTNQIS---------------VFFAWQNKLEGSIPSTLA 350 (1035)
Q Consensus 287 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~i~---------------~l~~~~n~l~~~~p~~l~ 350 (1035)
.|..|+++++|++|+|++|++.+.+|.. |.++++|++|+|++|+++ .+....|.+.+.+|..+.
T Consensus 310 ~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~ 389 (768)
T 3rgz_A 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTT
T ss_pred cchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhh
Confidence 9999999999999999999999777765 999999999999999875 122345777777888777
Q ss_pred C--CCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeee----------ccCCCCccc
Q 039419 351 N--CRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLM----------SFGNCTQLQ 418 (1035)
Q Consensus 351 ~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~----------~~~~l~~L~ 418 (1035)
. +++|++|++++|.+++.+|..+..+++|++|++++|++++..|..++.+++|+.|++. .|..+++|+
T Consensus 390 ~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 469 (768)
T 3rgz_A 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469 (768)
T ss_dssp CSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred hcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCce
Confidence 6 8899999999999998899999999999999999999999999999999999999974 366789999
Q ss_pred eeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCc
Q 039419 419 MLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNK 498 (1035)
Q Consensus 419 ~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 498 (1035)
+|+|++|++++.+|..+..+++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..+++|++|+|++|+
T Consensus 470 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 549 (768)
T 3rgz_A 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL 549 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSE
T ss_pred EEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCccchhhhhhc-------------------------------------------------------------------
Q 039419 499 LSGKIPVELFEIE------------------------------------------------------------------- 511 (1035)
Q Consensus 499 l~~~~p~~~~~~~------------------------------------------------------------------- 511 (1035)
++|.+|..++...
T Consensus 550 l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~ 629 (768)
T 3rgz_A 550 FNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629 (768)
T ss_dssp EESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCS
T ss_pred cCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhh
Confidence 9999998876531
Q ss_pred --cCcceeeccCccCCCCCCccccCCccccEEeccCCcccC-ccccccccCCCcEEeccCCcCcccCCCh-hhhhccccc
Q 039419 512 --GLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGG-DLLALSGLDNLVSLNVSYNNFTGYLPDS-KLFRQLSAT 587 (1035)
Q Consensus 512 --~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~l~~~ 587 (1035)
..+..|+|++|+++|.+|..++.+++|+.|+|++|++++ .|..+..+++|+.|||++|+++|.+|.. ..+..++.+
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 123479999999999999999999999999999999997 5578999999999999999999999975 446677888
Q ss_pred cccccccCCCC
Q 039419 588 EMAGNQGLCSR 598 (1035)
Q Consensus 588 ~~~~N~~~c~~ 598 (1035)
++.+|+..-..
T Consensus 710 ~ls~N~l~g~i 720 (768)
T 3rgz_A 710 DLSNNNLSGPI 720 (768)
T ss_dssp ECCSSEEEEEC
T ss_pred ECcCCcccccC
Confidence 99999865433
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.4e-58 Score=572.82 Aligned_cols=571 Identities=21% Similarity=0.142 Sum_probs=410.3
Q ss_pred ccceeEEeCCC----------CcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCC
Q 039419 19 CKWSHITCSPQ----------NFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSN 88 (1035)
Q Consensus 19 c~w~gi~c~~~----------~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n 88 (1035)
|.++-|.|+.. ..++.|+++++++.+..+..+.++++|++|+|++|.+++..|..++.+++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 55555666432 25677778877777766667777888888888888777766777777788888888888
Q ss_pred CCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCC
Q 039419 89 SLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIP 168 (1035)
Q Consensus 89 ~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~ 168 (1035)
++++..+..|+.+++|++|+|++|++++..|..++.+++|++|+|++|.+++..|..++++++|++|++++|. +.+..+
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~ 162 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNK-IQALKS 162 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSC-CCCBCH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCc-ccccCH
Confidence 7774444467778888888888887775555677777888888888887777677777778888888887775 333333
Q ss_pred CcC--CCccceEEEEeccccccccCcccccccccccceeecccccccCCccccc---cCcCCceEEecCCcCCCCCChhh
Q 039419 169 YEI--GDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIG---NCSELVDLFLYENDLSGSLPREL 243 (1035)
Q Consensus 169 ~~~--~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~---~l~~L~~L~L~~n~l~~~~~~~l 243 (1035)
..+ ..+++|+.|++++|.+.+..|..+..+.+|+.|++.++.+.+.....+. ..++|+.|++++|.+++..|..|
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 333 2457778888888877777777777666655555555444321111111 12556666666666666666666
Q ss_pred hcccc--hhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCcccc---------CCC
Q 039419 244 GKLQK--LEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISG---------SIP 312 (1035)
Q Consensus 244 ~~l~~--L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~---------~~~ 312 (1035)
..++. |++|++++|++.+..|..|..+++|++|+|++|++++..|..|.++++|++|++++|...+ +..
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~ 322 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence 66654 6667777776666666666666677777777776666666666666666666666654332 111
Q ss_pred CcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCC--CCCCcccC--cccceEeccccc
Q 039419 313 PVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGS--LHPGLFQL--QNLTKLLLISNG 388 (1035)
Q Consensus 313 ~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~~~~~~~l--~~L~~L~L~~N~ 388 (1035)
..|..+++|++|++++|+|+. ..+..|.++++|++|++++|.+... ....|..+ ++|+.|++++|+
T Consensus 323 ~~~~~l~~L~~L~l~~n~l~~----------~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~ 392 (680)
T 1ziw_A 323 FSFQWLKCLEHLNMEDNDIPG----------IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNK 392 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBCC----------CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSC
T ss_pred hhcccCCCCCEEECCCCccCC----------CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCC
Confidence 255666666666666665542 3345566666666666666654321 12222222 456666666666
Q ss_pred cccCCCCCCCCCCcceeEeee-----------ccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccC--CCC
Q 039419 389 ISGLIPPEIGNCSSLIRLRLM-----------SFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFV--GLI 455 (1035)
Q Consensus 389 i~~~~~~~~~~l~~L~~L~~~-----------~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~--~~~ 455 (1035)
+++..|..+..+++|+.|++. .|.++++|++|++++|++++..+..|..+++|+.|++++|.+. +..
T Consensus 393 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 472 (680)
T 1ziw_A 393 ISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSS 472 (680)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCS
T ss_pred CCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccC
Confidence 666666666666666666642 4678899999999999999888999999999999999999987 567
Q ss_pred chhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccch-------hhhhhccCcceeeccCccCCCCC
Q 039419 456 PESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPV-------ELFEIEGLDISLNLSWNALSGAI 528 (1035)
Q Consensus 456 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-------~~~~~~~l~~~L~Ls~N~l~~~~ 528 (1035)
|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++..+. ..+.....+..|+|++|+++.+.
T Consensus 473 p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 552 (680)
T 1ziw_A 473 PSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIP 552 (680)
T ss_dssp SCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCC
T ss_pred CcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCC
Confidence 88999999999999999999988888899999999999999999843211 11233334458999999999877
Q ss_pred CccccCCccccEEeccCCcccCccc-cccccCCCcEEeccCCcCcccCCChh--hhhccccccccccccCCCCCC
Q 039419 529 PPQISALNKLSILDLSHNKLGGDLL-ALSGLDNLVSLNVSYNNFTGYLPDSK--LFRQLSATEMAGNQGLCSRGH 600 (1035)
Q Consensus 529 ~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~~l~~~~~~~N~~~c~~~~ 600 (1035)
+..|..+++|++|+|++|+|++.+. .|..+++|+.|+|++|+|++.+|... .+.+++.+++.+|||.|+|+.
T Consensus 553 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 553 VEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred HHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 7889999999999999999999775 57899999999999999999877632 578899999999999999864
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.9e-54 Score=535.77 Aligned_cols=538 Identities=23% Similarity=0.228 Sum_probs=441.9
Q ss_pred CcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEe
Q 039419 30 NFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLIL 109 (1035)
Q Consensus 30 ~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L 109 (1035)
..++.|+++++.+.+..|..+.++++|++|+|++|.+++..+..|+.+++|++|+|++|++++..|..|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 36889999999999988999999999999999999999544457999999999999999999777789999999999999
Q ss_pred cccCCCCCCchhhhhhccccceeccccccCCCCchhhc--cccccceeecCCCcccCCCCCCcCCCccceEEEEeccccc
Q 039419 110 NSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELG--KLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKV 187 (1035)
Q Consensus 110 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~--~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 187 (1035)
++|.+++..|..++.+++|++|++++|.+++..+..++ .+++|++|++++|. +.+..|..+..+.+|+.|++.++.+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ-IKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC-CCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc-ccccChhhhhhhhhhhhhhcccccc
Confidence 99999988888899999999999999999977777665 55899999999996 6667788888899999998888877
Q ss_pred cccCccccc---ccccccceeecccccccCCccccccCcC--CceEEecCCcCCCCCChhhhcccchhHhhccccccccc
Q 039419 188 AGSLPASLG---KLSKLQSLSVYTTMLSGEIPPQIGNCSE--LVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGA 262 (1035)
Q Consensus 188 ~~~~p~~l~---~l~~L~~L~l~~n~l~~~~p~~l~~l~~--L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 262 (1035)
.+.....+. ..++|++|++++|.+.+..|..+..++. |+.|+|++|.+++..|..|+.+++|++|++++|++.+.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 644333222 3478888999999888888888888765 89999999988887788888888999999999988888
Q ss_pred CCccccCCCCCcEEEccCccCCC-----CCC----ccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhh
Q 039419 263 IPEEIGNCKSLKTIDLSLNFFSG-----SLP----QSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISV 333 (1035)
Q Consensus 263 ~p~~~~~l~~L~~L~L~~n~l~~-----~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 333 (1035)
.|..|.++++|+.|++++|...+ .+| ..|..+++|++|++++|++.+..+..|.++++|++|++++|.++.
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 88888888899999988875543 122 267888889999999998888888888888899999988886431
Q ss_pred hhhhccccCCCCCcCCCCC--CCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCC-CCCCCCCcceeEeee-
Q 039419 334 FFAWQNKLEGSIPSTLANC--RSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIP-PEIGNCSSLIRLRLM- 409 (1035)
Q Consensus 334 l~~~~n~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~~~- 409 (1035)
. ...+..|..+ ++|+.|++++|++++..+..|..+++|+.|++++|++++.+| ..+..+++|+.|++.
T Consensus 368 ~--------~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~ 439 (680)
T 1ziw_A 368 R--------TLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439 (680)
T ss_dssp C--------EECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCS
T ss_pred h--------hcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCC
Confidence 0 0011222222 466777777777766666666667777777777777665433 456666666666653
Q ss_pred ---------ccCCCCccceeecCCCccC--CCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCccccc
Q 039419 410 ---------SFGNCTQLQMLNLSNNTLG--GTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGA 478 (1035)
Q Consensus 410 ---------~~~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 478 (1035)
.|..+++|+.|++++|.++ +..|..|..+++|++|+|++|+|+++++..|..+++|+.|+|++|++++.
T Consensus 440 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~ 519 (680)
T 1ziw_A 440 NKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARL 519 (680)
T ss_dssp CSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGG
T ss_pred CCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCcccc
Confidence 3667889999999999987 57889999999999999999999999999999999999999999999865
Q ss_pred Cc--------cccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccC
Q 039419 479 IP--------SSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGG 550 (1035)
Q Consensus 479 ~~--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 550 (1035)
.+ ..|..+++|++|+|++|+|+ .+|...+.....+..|+|++|+++++.+..|..+++|+.|+|++|+|++
T Consensus 520 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 598 (680)
T 1ziw_A 520 WKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS 598 (680)
T ss_dssp GSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCB
T ss_pred chhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCc
Confidence 32 23789999999999999998 7887655554555689999999999999999999999999999999999
Q ss_pred ccc-ccc-ccCCCcEEeccCCcCcccCCC
Q 039419 551 DLL-ALS-GLDNLVSLNVSYNNFTGYLPD 577 (1035)
Q Consensus 551 ~~~-~~~-~l~~L~~L~ls~N~l~~~~p~ 577 (1035)
.+. .+. .+++|+.|++++|+|.+.++.
T Consensus 599 ~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 599 VEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cChhHhcccccccCEEEccCCCcccCCcc
Confidence 775 455 789999999999999987764
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.5e-55 Score=532.03 Aligned_cols=521 Identities=22% Similarity=0.242 Sum_probs=345.7
Q ss_pred cCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhh
Q 039419 45 PFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGA 124 (1035)
Q Consensus 45 ~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~ 124 (1035)
.+|..+.. .+++|+|++|.|++..|..|+.+++|++|+|++|++.+..|..|+++++|++|+|++|++++..|..++.
T Consensus 26 ~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 103 (606)
T 3t6q_A 26 EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSG 103 (606)
T ss_dssp SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSS
T ss_pred cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcc
Confidence 45555543 6899999999999877889999999999999999999888999999999999999999999778889999
Q ss_pred hccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCccccccccccc--
Q 039419 125 CIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQ-- 202 (1035)
Q Consensus 125 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~-- 202 (1035)
+++|++|++++|.+++..+..++++++|++|++++|....-..|. +..+++|++|++++|.+.+..|..++.+++|+
T Consensus 104 l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l 182 (606)
T 3t6q_A 104 PKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK-GFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNL 182 (606)
T ss_dssp CTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCT-TCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSE
T ss_pred cccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCccc-ccCCcccCEEEcccCcccccChhhhhhhccccee
Confidence 999999999999998666788999999999999999732223344 44499999999999999988889999999999
Q ss_pred ceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccc-----cccCCccccCCC--CCcE
Q 039419 203 SLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNF-----DGAIPEEIGNCK--SLKT 275 (1035)
Q Consensus 203 ~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l-----~~~~p~~~~~l~--~L~~ 275 (1035)
+|++++|.+.+..|..+. ..+|+.|++++|. ..+..+..+.++....+..+.+ ....+..+..+. +|+.
T Consensus 183 ~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~ 258 (606)
T 3t6q_A 183 SLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVES 258 (606)
T ss_dssp EEECTTCCCCEECTTTTT-TCEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEE
T ss_pred EEecCCCccCccChhHhh-hccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeE
Confidence 889999999976666554 4689999999886 2333344433322222221111 111122222222 5666
Q ss_pred EEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCC
Q 039419 276 IDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSL 355 (1035)
Q Consensus 276 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L 355 (1035)
|++++|.+++..+..|+++++|++|++++|+++ .+|..+.++++|++|++++|+++.+ .|..+..+++|
T Consensus 259 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~----------~~~~~~~l~~L 327 (606)
T 3t6q_A 259 INLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENL----------CQISASNFPSL 327 (606)
T ss_dssp EECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBG----------GGGCGGGCTTC
T ss_pred EEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcC----------chhhhhccCcC
Confidence 666666666555555666666666666666666 4455566666666666666655432 23455666666
Q ss_pred cEEeccCcCCCCCCCC-CcccCcccceEeccccccccCC--CCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCc
Q 039419 356 EAVDLSHNALTGSLHP-GLFQLQNLTKLLLISNGISGLI--PPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLP 432 (1035)
Q Consensus 356 ~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~ 432 (1035)
++|++++|.+.+.++. .+..+++|++|++++|.+++.. +.. |.++++|++|++++|++++..|
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--------------~~~l~~L~~L~l~~n~l~~~~~ 393 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQ--------------LRNLSHLQSLNLSYNEPLSLKT 393 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTT--------------TTTCTTCCEEECCSCSCEEECT
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchh--------------cccCCCCCEEECCCCcCCcCCH
Confidence 6666666666544433 3556666666666666665433 222 3334556666666666665556
Q ss_pred ccccCCCCccEEEcCCCccCCCCch-hccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCc-cc--hhhh
Q 039419 433 SSLASLTRLQVLDISVNQFVGLIPE-SFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGK-IP--VELF 508 (1035)
Q Consensus 433 ~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p--~~~~ 508 (1035)
..|..+++|++|++++|++.+..+. .|..+++|+.|++++|.+++..|..|..+++|++|+|++|++++. ++ ..+.
T Consensus 394 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 473 (606)
T 3t6q_A 394 EAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQ 473 (606)
T ss_dssp TTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGG
T ss_pred HHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhc
Confidence 6666666666666666666655433 356666666666666666655666666666666666666666542 11 2233
Q ss_pred hhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCcc-ccccccCCCcEEeccCCcCcccCCCh-hhhhcccc
Q 039419 509 EIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDL-LALSGLDNLVSLNVSYNNFTGYLPDS-KLFRQLSA 586 (1035)
Q Consensus 509 ~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~l~~ 586 (1035)
.+..+ ..|++++|.+++..|..|..+++|++|+|++|++++.+ ..+..++.| .|++++|++++.+|.. ..+.+++.
T Consensus 474 ~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~ 551 (606)
T 3t6q_A 474 TLGRL-EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRT 551 (606)
T ss_dssp GCTTC-CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSE
T ss_pred cCCCc-cEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCE
Confidence 33332 35666666666666666666666666666666666543 456666666 6666666666655542 34555666
Q ss_pred ccccccccCCCCC
Q 039419 587 TEMAGNQGLCSRG 599 (1035)
Q Consensus 587 ~~~~~N~~~c~~~ 599 (1035)
+++.+||+.|.++
T Consensus 552 L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 552 INLRQNPLDCTCS 564 (606)
T ss_dssp EECTTCCEECSGG
T ss_pred EeCCCCCccccCC
Confidence 6666666666554
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5e-54 Score=542.13 Aligned_cols=523 Identities=21% Similarity=0.189 Sum_probs=403.0
Q ss_pred ecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCC-ChhhhccccccceEecccCCC
Q 039419 37 IQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGV-PSSIGKLINLQDLILNSNQLT 115 (1035)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~-p~~i~~l~~L~~L~L~~n~l~ 115 (1035)
.++++++ .+|. -.++|++|+|++|.|++..|..|+.+++|++|+|++|.+.+.+ |..|+++++|++|+|++|.++
T Consensus 11 cs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~ 86 (844)
T 3j0a_A 11 YRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY 86 (844)
T ss_dssp ESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCC
T ss_pred ccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCc
Confidence 3344554 3444 3467888888888888777778888888888888888655555 677888888888888888888
Q ss_pred CCCchhhhhhccccceeccccccCCCCchh--hccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcc
Q 039419 116 GEIPKELGACIKLKNLLLFDNYLSGNLPVE--LGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPA 193 (1035)
Q Consensus 116 ~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~--l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~ 193 (1035)
+..|..++.+++|++|+|++|.+++.+|.. ++++++|++|++++|.......+..++++++|++|++++|.+.+..+.
T Consensus 87 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 87 FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred ccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 777888888888888888888887766665 788888888888888633323345678888888888888888888888
Q ss_pred ccccc--ccccceeecccccccCCccccccCcC------CceEEecCCcCCCCCChhhhcc---cchhHhhcc-------
Q 039419 194 SLGKL--SKLQSLSVYTTMLSGEIPPQIGNCSE------LVDLFLYENDLSGSLPRELGKL---QKLEKMLLW------- 255 (1035)
Q Consensus 194 ~l~~l--~~L~~L~l~~n~l~~~~p~~l~~l~~------L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~l~------- 255 (1035)
.+..+ ++|+.|++++|.+.+..|..++.+.+ |+.|++++|.+++..+..+... .+++.|.++
T Consensus 167 ~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~ 246 (844)
T 3j0a_A 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246 (844)
T ss_dssp GGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCS
T ss_pred HcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccc
Confidence 88877 78888888888888878777776665 8888888888887777776643 455566555
Q ss_pred --cccccccCCccccCC--CCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchh
Q 039419 256 --QNNFDGAIPEEIGNC--KSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQI 331 (1035)
Q Consensus 256 --~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i 331 (1035)
.+++.+..+..|..+ ++|+.|+|++|.+.+..+..|..+++|+.|+|++|++.+..+..|.++++|++|+|++|+|
T Consensus 247 ~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l 326 (844)
T 3j0a_A 247 FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL 326 (844)
T ss_dssp SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCC
T ss_pred ccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCC
Confidence 233333344455554 6899999999999888888889999999999999999888888899999999999998877
Q ss_pred hhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeecc
Q 039419 332 SVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSF 411 (1035)
Q Consensus 332 ~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~ 411 (1035)
+. ..|..|.++++|+.|+|++|.++...+..|..+++|++|+|++|.+++..
T Consensus 327 ~~----------~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~------------------ 378 (844)
T 3j0a_A 327 GE----------LYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH------------------ 378 (844)
T ss_dssp SC----------CCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS------------------
T ss_pred Cc----------cCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc------------------
Confidence 53 45678888999999999999998777778888999999999999887431
Q ss_pred CCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCc-hhccCccccchhhccCCcccccCcc-ccCCCCCC
Q 039419 412 GNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIP-ESFGQLASLNRLILSKNSFSGAIPS-SLGRCESL 489 (1035)
Q Consensus 412 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L 489 (1035)
.+++|+.|++++|+++ .+|.. ..+++.|++++|++++... ..+..+++|+.|+|++|++++..+. .+..+++|
T Consensus 379 -~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L 453 (844)
T 3j0a_A 379 -FIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSL 453 (844)
T ss_dssp -SCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTC
T ss_pred -CCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCcc
Confidence 2466888899999888 34443 4578889999999887533 3356788899999999998865443 45668889
Q ss_pred cEEEcCCCcCcCc-----cchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEE
Q 039419 490 QSLDLSSNKLSGK-----IPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSL 564 (1035)
Q Consensus 490 ~~L~Ls~N~l~~~-----~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L 564 (1035)
++|+|++|.+++. .+..+..+ ..+..|+|++|+|++..|..|..+++|++|+|++|+|++.+..... ++|+.|
T Consensus 454 ~~L~Ls~N~l~~~~~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L 531 (844)
T 3j0a_A 454 EQLFLGENMLQLAWETELCWDVFEGL-SHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEIL 531 (844)
T ss_dssp CBCEEESCCCSSSCCSCCCSSCSSCB-CCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEE
T ss_pred ccccCCCCccccccccccchhhhcCc-ccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEE
Confidence 9999999988732 22333333 3345789999999988888899999999999999999887654333 889999
Q ss_pred eccCCcCcccCCChhhhhccccccccccccCCCCCC
Q 039419 565 NVSYNNFTGYLPDSKLFRQLSATEMAGNQGLCSRGH 600 (1035)
Q Consensus 565 ~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~~ 600 (1035)
+|++|+|++.+|.. |.++..+++.+||+.|.|+.
T Consensus 532 ~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 532 DISRNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp EEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred ECCCCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 99999999888864 67888888999999997763
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.4e-54 Score=529.53 Aligned_cols=496 Identities=23% Similarity=0.203 Sum_probs=334.3
Q ss_pred cccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceec
Q 039419 54 SFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLL 133 (1035)
Q Consensus 54 ~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 133 (1035)
++|++|+|++|.+++..+..|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++.+++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 45555555555555444445555555555555555555444555555555555555555555444555555555555555
Q ss_pred cccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCccccccccccc----ceeeccc
Q 039419 134 FDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQ----SLSVYTT 209 (1035)
Q Consensus 134 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~----~L~l~~n 209 (1035)
++|.+++..+..++++++|++|++++|......+|..++++++|+.|++++|.+++..|..++.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 555555433345555555555555555422224455555555555555555555555555555555443 4555555
Q ss_pred ccccCCccccccCcCCceEEecCCcCC-CCCChhhhcccchhH--------------------------------hhc-c
Q 039419 210 MLSGEIPPQIGNCSELVDLFLYENDLS-GSLPRELGKLQKLEK--------------------------------MLL-W 255 (1035)
Q Consensus 210 ~l~~~~p~~l~~l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~--------------------------------L~l-~ 255 (1035)
.+++..+..+ ...+|+.|++++|.++ +..|..+..++.|+. +++ .
T Consensus 192 ~l~~~~~~~~-~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAF-QGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTT-TTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccc-cCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 5553222222 2225555555555543 123333444444333 333 5
Q ss_pred cccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhh
Q 039419 256 QNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFF 335 (1035)
Q Consensus 256 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~ 335 (1035)
.|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|++|++++|++ +.+| .+ .+++|++|++++|+...
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~-- 342 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSI-- 342 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCE--
T ss_pred cccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCcc--
Confidence 6667776766 7888888888888888874 55 788888888888888888 4566 44 88888888888884321
Q ss_pred hhccccCCCCCcCCCCCCCCcEEeccCcCCCCC--CCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCC
Q 039419 336 AWQNKLEGSIPSTLANCRSLEAVDLSHNALTGS--LHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGN 413 (1035)
Q Consensus 336 ~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~ 413 (1035)
+..+..+++|++|++++|.+++. .+..+..+++|++|++++|.+++. |.. |.+
T Consensus 343 ----------~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~--------------~~~ 397 (606)
T 3vq2_A 343 ----------SFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-SAN--------------FMG 397 (606)
T ss_dssp ----------ECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEE-CCC--------------CTT
T ss_pred ----------chhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccc-hhh--------------ccC
Confidence 12566788888888888888755 366777888888888888888753 233 445
Q ss_pred CCccceeecCCCccCCCCc-ccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccc-cCccccCCCCCCcE
Q 039419 414 CTQLQMLNLSNNTLGGTLP-SSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSG-AIPSSLGRCESLQS 491 (1035)
Q Consensus 414 l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~ 491 (1035)
+++|++|++++|++++..| ..+..+++|++|++++|++.+..|..|..+++|++|++++|++++ .+|..|..+++|++
T Consensus 398 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 477 (606)
T 3vq2_A 398 LEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTF 477 (606)
T ss_dssp CTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCE
Confidence 5778888899998887776 678888899999999999888888888888899999999998886 47888888899999
Q ss_pred EEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccC-CCcEEeccCCc
Q 039419 492 LDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLD-NLVSLNVSYNN 570 (1035)
Q Consensus 492 L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~-~L~~L~ls~N~ 570 (1035)
|+|++|++++..|..+..+..+. .|++++|++++..|..|..+++|++|+|++|+|+..+..+..++ +|+.|++++|+
T Consensus 478 L~Ls~n~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~ 556 (606)
T 3vq2_A 478 LDLSKCQLEQISWGVFDTLHRLQ-LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNS 556 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCC-EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCC
T ss_pred EECCCCcCCccChhhhcccccCC-EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCC
Confidence 99999988866666666665554 78888888888888888888888888888888888777788886 58888888888
Q ss_pred CcccCCChhhhhcc
Q 039419 571 FTGYLPDSKLFRQL 584 (1035)
Q Consensus 571 l~~~~p~~~~~~~l 584 (1035)
|.+.++.......+
T Consensus 557 ~~c~c~~~~~~~~l 570 (606)
T 3vq2_A 557 VACICEHQKFLQWV 570 (606)
T ss_dssp CCCSSTTHHHHTTT
T ss_pred cccCCccHHHHHHH
Confidence 88877764333333
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.7e-54 Score=527.03 Aligned_cols=526 Identities=21% Similarity=0.190 Sum_probs=436.6
Q ss_pred ceeEEeCCC----------CcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCC
Q 039419 21 WSHITCSPQ----------NFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSL 90 (1035)
Q Consensus 21 w~gi~c~~~----------~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l 90 (1035)
+..+.|... ..++.|+++++.+.+..|..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 445778543 3688999999999998899999999999999999999988899999999999999999999
Q ss_pred CCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCc
Q 039419 91 VGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYE 170 (1035)
Q Consensus 91 ~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~ 170 (1035)
++..|..|+.+++|++|+|++|++++..|..++.+++|++|++++|.+.+..++.+..+++|++|++++|. +.+..+..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA-IHYLSKED 172 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC-CCEECHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc-ccccChhh
Confidence 98889999999999999999999996667889999999999999999996444555569999999999996 45555677
Q ss_pred CCCccceE--EEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCC-----CCCChhh
Q 039419 171 IGDCQSLL--VVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLS-----GSLPREL 243 (1035)
Q Consensus 171 ~~~l~~L~--~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~-----~~~~~~l 243 (1035)
++.+++|+ .|++++|.+.+..|..+.. .+|++|++++|. .++..+..+.++....+..+.+. ...+..|
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHh
Confidence 88889998 8999999999877777655 689999999987 34556666666554444433222 2234445
Q ss_pred hccc--chhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCcc
Q 039419 244 GKLQ--KLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSL 321 (1035)
Q Consensus 244 ~~l~--~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 321 (1035)
..+. +|+.|++++|.+.+..+..|..+++|++|+|++|+++ .+|..+.++++|++|++++|++.+..|..+.++++|
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 5554 7888999999998887888899999999999999998 677788899999999999999988888888999999
Q ss_pred ceeccccchhhhhhhhccccCCCCC-cCCCCCCCCcEEeccCcCCCCCC--CCCcccCcccceEeccccccccCCCCCCC
Q 039419 322 LQLQLDTNQISVFFAWQNKLEGSIP-STLANCRSLEAVDLSHNALTGSL--HPGLFQLQNLTKLLLISNGISGLIPPEIG 398 (1035)
Q Consensus 322 ~~L~L~~N~i~~l~~~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 398 (1035)
++|++++|++. +.+| ..+..+++|++|++++|.+++.. +..+..+++|++|++++|++++..|..+.
T Consensus 328 ~~L~l~~n~~~----------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 397 (606)
T 3t6q_A 328 THLSIKGNTKR----------LELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFK 397 (606)
T ss_dssp SEEECCSCSSC----------CBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTT
T ss_pred CEEECCCCCcc----------cccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhc
Confidence 99999988764 2333 45888899999999999998665 67788899999999999998877776654
Q ss_pred CCCcceeEeeeccCCCCccceeecCCCccCCCCcc-cccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccc
Q 039419 399 NCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPS-SLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSG 477 (1035)
Q Consensus 399 ~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 477 (1035)
. +++|++|++++|++++..+. .+..+++|++|++++|++.+..|..|..+++|++|++++|++++
T Consensus 398 ~--------------l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 463 (606)
T 3t6q_A 398 E--------------CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPK 463 (606)
T ss_dssp T--------------CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGG
T ss_pred C--------------CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCc
Confidence 4 46688899999998876554 48888999999999999988888888899999999999999876
Q ss_pred c---CccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccc-
Q 039419 478 A---IPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLL- 553 (1035)
Q Consensus 478 ~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~- 553 (1035)
. .+..+..+++|++|+|++|++++..|..+..+..+. .|+|++|++++..|..+..+++| +|+|++|++++.++
T Consensus 464 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~ 541 (606)
T 3t6q_A 464 GNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN-HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPS 541 (606)
T ss_dssp GEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC-EEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGG
T ss_pred cccccchhhccCCCccEEECCCCccCccChhhhccccCCC-EEECCCCccCcCChhHhCccccc-EEECcCCcccccCHh
Confidence 2 335688889999999999999866677666665554 79999999999999999999999 99999999998664
Q ss_pred cccccCCCcEEeccCCcCcccCCCh
Q 039419 554 ALSGLDNLVSLNVSYNNFTGYLPDS 578 (1035)
Q Consensus 554 ~~~~l~~L~~L~ls~N~l~~~~p~~ 578 (1035)
.+..+++|+.|++++|+|++.++..
T Consensus 542 ~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 542 LLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp GHHHHHTSSEEECTTCCEECSGGGH
T ss_pred hcccCCCCCEEeCCCCCccccCCcH
Confidence 5788999999999999999877754
No 9
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.3e-54 Score=529.20 Aligned_cols=520 Identities=15% Similarity=0.192 Sum_probs=297.3
Q ss_pred cCCCCCCCCCCccc---eeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceee
Q 039419 8 LSNWNPSDSNPCKW---SHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTID 84 (1035)
Q Consensus 8 l~~w~~~~~~~c~w---~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ 84 (1035)
.++|+.+ .+||.| +||+|+..++|++|+++++++.|.+|+.++.|++|++|+|++|.+.. .+.-++...
T Consensus 57 ~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~-~~~~~~~~~------ 128 (636)
T 4eco_A 57 GANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKV-NERLFGPKG------ 128 (636)
T ss_dssp -CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGG-TCCSBSTTS------
T ss_pred CCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccceEEECcCCcccc-CCccccccc------
Confidence 4589875 589999 99999988999999999999999999999999999999999997742 222122110
Q ss_pred CCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhh-hccccceeccccccCCCCchhhccccccceeecCCCccc
Q 039419 85 VSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGA-CIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDI 163 (1035)
Q Consensus 85 ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~ 163 (1035)
+.-.+|..+ +.+|+ ++++.|.+.+.+|..+.. +..+..+++....+.. .....++.+++..
T Consensus 129 -----~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~---- 190 (636)
T 4eco_A 129 -----ISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQ---- 190 (636)
T ss_dssp -----BCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTC----
T ss_pred -----cccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc------ccccchhhhhhcc----
Confidence 111344444 55666 777777777666666653 3344444444332220 1111222222221
Q ss_pred CCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccC-----------------Cccccc--cCcC
Q 039419 164 AGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGE-----------------IPPQIG--NCSE 224 (1035)
Q Consensus 164 ~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~-----------------~p~~l~--~l~~ 224 (1035)
..|++++ +|..|+++++|++|+|++|.+++. +|..++ ++++
T Consensus 191 -------------------~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~ 250 (636)
T 4eco_A 191 -------------------LSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKD 250 (636)
T ss_dssp -------------------CSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred -------------------ccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCC
Confidence 1223333 344444444444444444444432 444444 4444
Q ss_pred CceEEecCCcCCCCCChhhhcccchhHhhccccc-ccc-cCCccccCC------CCCcEEEccCccCCCCCCc--cccCC
Q 039419 225 LVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNN-FDG-AIPEEIGNC------KSLKTIDLSLNFFSGSLPQ--SFGNL 294 (1035)
Q Consensus 225 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~-l~~-~~p~~~~~l------~~L~~L~L~~n~l~~~~~~--~~~~l 294 (1035)
|++|+|++|.+.+.+|..|+++++|++|++++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .|+++
T Consensus 251 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l 329 (636)
T 4eco_A 251 LTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKM 329 (636)
T ss_dssp CCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTC
T ss_pred CCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccC
Confidence 4444444444444444444444444444444444 444 444444443 55555555555555 4444 55555
Q ss_pred CCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCC-CcEEeccCcCCCCCCCCCc
Q 039419 295 SSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRS-LEAVDLSHNALTGSLHPGL 373 (1035)
Q Consensus 295 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~~~~~ 373 (1035)
++|++|++++|++.+.+| .|..+++|++|+|++|+++ .+|..+..+++ |++|++++|.++ .+|..+
T Consensus 330 ~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-----------~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~ 396 (636)
T 4eco_A 330 KKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-----------EIPANFCGFTEQVENLSFAHNKLK-YIPNIF 396 (636)
T ss_dssp TTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-----------ECCTTSEEECTTCCEEECCSSCCS-SCCSCC
T ss_pred CCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-----------cccHhhhhhcccCcEEEccCCcCc-ccchhh
Confidence 555555555555554444 5555555555555555554 23445555555 666666666655 444444
Q ss_pred ccCc--ccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCcc
Q 039419 374 FQLQ--NLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQF 451 (1035)
Q Consensus 374 ~~l~--~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l 451 (1035)
..++ +|++|++++|++++..|..+..+.. ....+++|++|+|++|++++..+..+..+++|++|+|++|++
T Consensus 397 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~-------~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l 469 (636)
T 4eco_A 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP-------TPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNML 469 (636)
T ss_dssp CTTCSSCEEEEECCSSCTTTTTTCSSCTTCS-------SCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCC
T ss_pred hhcccCccCEEECcCCcCCCcchhhhccccc-------ccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCC
Confidence 4433 5666666666665555554441110 001223456666666666643333444556666666666666
Q ss_pred CCCCchhccCcc-------ccchhhccCCcccccCccccC--CCCCCcEEEcCCCcCcCccchhhhhhccCcceeec---
Q 039419 452 VGLIPESFGQLA-------SLNRLILSKNSFSGAIPSSLG--RCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNL--- 519 (1035)
Q Consensus 452 ~~~~~~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~L--- 519 (1035)
+.+++..+..+. +|+.|+|++|+|+ .+|..+. .+++|++|+|++|+|++ +|..++.+..+. .|+|
T Consensus 470 ~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~-~L~Ls~N 546 (636)
T 4eco_A 470 TEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLK-GFGIRNQ 546 (636)
T ss_dssp SBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCC-EEECCSC
T ss_pred CCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCC-EEECCCC
Confidence 643333333222 5666666666665 4454454 56666666666666654 555555544443 4555
Q ss_pred ---cCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcccCCCh---hhhhccccccccccc
Q 039419 520 ---SWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGYLPDS---KLFRQLSATEMAGNQ 593 (1035)
Q Consensus 520 ---s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~---~~~~~l~~~~~~~N~ 593 (1035)
++|++.+.+|..+..+++|++|+|++|++...+..+. ++|+.|+|++|++....... ........+.+..++
T Consensus 547 ~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ip~~~~--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~~~~~ 624 (636)
T 4eco_A 547 RDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKIT--PNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ 624 (636)
T ss_dssp BCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCCC--TTCCEEECCSCTTCEEECTTTHHHHHTTCCEEECCTTS
T ss_pred cccccCcccccChHHHhcCCCCCEEECCCCcCCccCHhHh--CcCCEEECcCCCCccccHHhcchhhhcccceeecCCcc
Confidence 6788999999999999999999999999977776655 89999999999988654432 112233334445555
Q ss_pred cCCCCC
Q 039419 594 GLCSRG 599 (1035)
Q Consensus 594 ~~c~~~ 599 (1035)
..|+|+
T Consensus 625 ~i~~C~ 630 (636)
T 4eco_A 625 DIRGCD 630 (636)
T ss_dssp EEESCG
T ss_pred ccCCCc
Confidence 555654
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-53 Score=532.91 Aligned_cols=520 Identities=21% Similarity=0.219 Sum_probs=442.9
Q ss_pred ccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCC-CCCCCCCCCCceeeCCCCCCCCCCChh
Q 039419 19 CKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPI-SPDLGDCTQLTTIDVSSNSLVGGVPSS 97 (1035)
Q Consensus 19 c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~-~~~~~~l~~L~~L~ls~n~l~~~~p~~ 97 (1035)
|.|..|.+ -...++.|+++.+.+.+..|..+.++++|++|+|++|.+.+.+ |..|+.+++|++|+|++|++.+..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 67888888 5567999999999999999999999999999999999766666 778999999999999999999888999
Q ss_pred hhccccccceEecccCCCCCCchh--hhhhccccceeccccccCCCCc-hhhccccccceeecCCCcccCCCCCCcCCCc
Q 039419 98 IGKLINLQDLILNSNQLTGEIPKE--LGACIKLKNLLLFDNYLSGNLP-VELGKLVNLEVIRAGGNKDIAGKIPYEIGDC 174 (1035)
Q Consensus 98 i~~l~~L~~L~L~~n~l~~~~p~~--l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l 174 (1035)
|+++++|++|+|++|.+++.+|.. +..+++|++|+|++|.+.+..+ ..|+++++|++|++++|. +.+..+..+..+
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~-i~~~~~~~l~~l 171 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQ-IFLVCEHELEPL 171 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSC-CCCCCSGGGHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCc-CCeeCHHHcccc
Confidence 999999999999999999877776 8999999999999999987655 689999999999999996 566677778877
Q ss_pred --cceEEEEeccccccccCccccccccc------ccceeecccccccCCccccccC---cCCceEEecCC---------c
Q 039419 175 --QSLLVVGLADTKVAGSLPASLGKLSK------LQSLSVYTTMLSGEIPPQIGNC---SELVDLFLYEN---------D 234 (1035)
Q Consensus 175 --~~L~~L~l~~~~~~~~~p~~l~~l~~------L~~L~l~~n~l~~~~p~~l~~l---~~L~~L~L~~n---------~ 234 (1035)
++|+.|+++.|.+.+..|..++.+.+ |++|++++|.+.+.++..+... .+++.|.++.+ .
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999999988887776 9999999999998888887654 57788887733 3
Q ss_pred CCCCCChhhhcc--cchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCC
Q 039419 235 LSGSLPRELGKL--QKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIP 312 (1035)
Q Consensus 235 l~~~~~~~l~~l--~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 312 (1035)
+.+.....|..+ ++|++|++++|.+.+..|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|++.+..+
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 443344455554 689999999999998889999999999999999999998889999999999999999999998889
Q ss_pred CcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccC
Q 039419 313 PVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGL 392 (1035)
Q Consensus 313 ~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 392 (1035)
..|.++++|+.|+|++|+|+. ..+..|.++++|+.|+|++|.+++.. .+++|+.|++++|+++.+
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~----------~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~l 396 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAI----------IQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLVTL 396 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCC----------CCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCCCC
T ss_pred HHhcCCCCCCEEECCCCCCCc----------cChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCcccc
Confidence 999999999999999998863 34567899999999999999998432 378999999999999844
Q ss_pred CCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCc-ccccCCCCccEEEcCCCccCCCCch-hccCccccchhhc
Q 039419 393 IPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLP-SSLASLTRLQVLDISVNQFVGLIPE-SFGQLASLNRLIL 470 (1035)
Q Consensus 393 ~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L 470 (1035)
|.. ..+++.|++++|++++... ..+.++++|+.|+|++|++++..+. .+..+++|+.|+|
T Consensus 397 -~~~-----------------~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L 458 (844)
T 3j0a_A 397 -PKI-----------------NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFL 458 (844)
T ss_dssp -CCC-----------------CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEE
T ss_pred -ccc-----------------ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccC
Confidence 322 2458899999999986432 2456889999999999999876543 4667889999999
Q ss_pred cCCccc-----ccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccC
Q 039419 471 SKNSFS-----GAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSH 545 (1035)
Q Consensus 471 s~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 545 (1035)
++|.++ +..+..|..+++|+.|+|++|+|++..|..+..+..+ ..|+|++|+|++..+..+. ++|+.|||++
T Consensus 459 s~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~ 535 (844)
T 3j0a_A 459 GENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTAL-RGLSLNSNRLTVLSHNDLP--ANLEILDISR 535 (844)
T ss_dssp ESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSC-SEEEEESCCCSSCCCCCCC--SCCCEEEEEE
T ss_pred CCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhh-heeECCCCCCCccChhhhh--ccccEEECCC
Confidence 999997 3445678899999999999999996655555555555 4799999999988888777 8999999999
Q ss_pred CcccCccccccccCCCcEEeccCCcCcccCCCh
Q 039419 546 NKLGGDLLALSGLDNLVSLNVSYNNFTGYLPDS 578 (1035)
Q Consensus 546 N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~ 578 (1035)
|+|++.++.. +.+|+.|++++|++.+.++..
T Consensus 536 N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 536 NQLLAPNPDV--FVSLSVLDITHNKFICECELS 566 (844)
T ss_dssp ECCCCCCSCC--CSSCCEEEEEEECCCCSSSCC
T ss_pred CcCCCCChhH--hCCcCEEEecCCCcccccccH
Confidence 9999876533 458999999999999877653
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.2e-53 Score=517.60 Aligned_cols=505 Identities=21% Similarity=0.184 Sum_probs=424.6
Q ss_pred ceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceecccc
Q 039419 57 QKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDN 136 (1035)
Q Consensus 57 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n 136 (1035)
+.++.++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++..|..+..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 35667778888 7887665 79999999999999777889999999999999999999777889999999999999999
Q ss_pred ccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccc-cCcccccccccccceeecccccccCC
Q 039419 137 YLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAG-SLPASLGKLSKLQSLSVYTTMLSGEI 215 (1035)
Q Consensus 137 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-~~p~~l~~l~~L~~L~l~~n~l~~~~ 215 (1035)
.+++..|..|+++++|++|++++|. +.+..+..++.+++|++|++++|.+.+ .+|..|+++++|++|++++|.+++..
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETK-LASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSC-CCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred cccccChhhcCCcccCCEEEccCCc-cccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 9997779999999999999999997 444555789999999999999999986 57999999999999999999999888
Q ss_pred ccccccCcCCc----eEEecCCcCCCCCChhhhcccchhHhhccccccc-ccCCccccCCCCCcEEEc------------
Q 039419 216 PPQIGNCSELV----DLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFD-GAIPEEIGNCKSLKTIDL------------ 278 (1035)
Q Consensus 216 p~~l~~l~~L~----~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~L------------ 278 (1035)
|..++.+.+|+ .|++++|.+++..+..+... +|++|++++|.+. +..|..+.++++|+.+++
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~ 248 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE 248 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccc
Confidence 88888888775 79999999996666655554 8999999999986 466778888888888877
Q ss_pred ---------------------cCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhh
Q 039419 279 ---------------------SLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAW 337 (1035)
Q Consensus 279 ---------------------~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~ 337 (1035)
..|.+.+..|. +..+++|+.|++++|.+.. +| .+..+++|++|++++|++.
T Consensus 249 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~----- 320 (606)
T 3vq2_A 249 IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLK----- 320 (606)
T ss_dssp CCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCS-----
T ss_pred ccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCc-----
Confidence 45555555555 7777777777777777763 34 6777777777777777664
Q ss_pred ccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCC--CCCCCCCCcceeEeeeccCCCC
Q 039419 338 QNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLI--PPEIGNCSSLIRLRLMSFGNCT 415 (1035)
Q Consensus 338 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~~~~~~~l~ 415 (1035)
.+| .+ .+++|+.|++++|...+.. .+..+++|++|++++|++++.. |. .+.+++
T Consensus 321 ------~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~--------------~~~~~~ 376 (606)
T 3vq2_A 321 ------QFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSY--------------SDLGTN 376 (606)
T ss_dssp ------SCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCH--------------HHHCCS
T ss_pred ------ccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhh--------------hhccCC
Confidence 344 34 7777778888777544222 5567777888888877776442 22 345678
Q ss_pred ccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCc-hhccCccccchhhccCCcccccCccccCCCCCCcEEEc
Q 039419 416 QLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIP-ESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDL 494 (1035)
Q Consensus 416 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 494 (1035)
+|++|+|++|++++ +|..+..+++|+.|++++|++.+..+ ..|..+++|+.|++++|.+++..|..|..+++|++|+|
T Consensus 377 ~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 455 (606)
T 3vq2_A 377 SLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455 (606)
T ss_dssp CCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred cccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEEC
Confidence 89999999999995 56889999999999999999998887 78999999999999999999999999999999999999
Q ss_pred CCCcCcCc-cchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCc-cccccccCCCcEEeccCCcCc
Q 039419 495 SSNKLSGK-IPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGD-LLALSGLDNLVSLNVSYNNFT 572 (1035)
Q Consensus 495 s~N~l~~~-~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~l~~L~~L~ls~N~l~ 572 (1035)
++|++++. +|..+..+..+. .|++++|++++..|..|..+++|++|+|++|++++. +..+..+++|++|+|++|+|+
T Consensus 456 ~~n~l~~~~~~~~~~~l~~L~-~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 456 AGNSFKDNTLSNVFANTTNLT-FLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp TTCEEGGGEECSCCTTCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CCCcCCCcchHHhhccCCCCC-EEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 99999974 666666665554 799999999999999999999999999999999996 578999999999999999999
Q ss_pred ccCCChhhhh-ccccccccccccCCCCCC
Q 039419 573 GYLPDSKLFR-QLSATEMAGNQGLCSRGH 600 (1035)
Q Consensus 573 ~~~p~~~~~~-~l~~~~~~~N~~~c~~~~ 600 (1035)
..++....+. +++.+++.+||+.|+++.
T Consensus 535 ~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 535 TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 7666655554 588899999999998764
No 12
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.8e-52 Score=511.11 Aligned_cols=485 Identities=19% Similarity=0.230 Sum_probs=327.0
Q ss_pred CCCCCC----CCC--ccc------------eeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEee-cCcccCCCC
Q 039419 10 NWNPSD----SNP--CKW------------SHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLII-SGSNLTGPI 70 (1035)
Q Consensus 10 ~w~~~~----~~~--c~w------------~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L-~~~~l~~~~ 70 (1035)
+|+.++ .+| |.| .||+|+..++|++|+|+++++.|.+|+.+++|++|++|+| ++|.+.|..
T Consensus 285 ~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~ 364 (876)
T 4ecn_A 285 NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGR 364 (876)
T ss_dssp GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTT
T ss_pred CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccc
Confidence 797664 345 999 9999998899999999999999999999999999999999 889888774
Q ss_pred CCCCCCCC-CCc-----ee---------eCC-CCCCCC-----------CCChhhhccccccceEecc--cCCCCCCchh
Q 039419 71 SPDLGDCT-QLT-----TI---------DVS-SNSLVG-----------GVPSSIGKLINLQDLILNS--NQLTGEIPKE 121 (1035)
Q Consensus 71 ~~~~~~l~-~L~-----~L---------~ls-~n~l~~-----------~~p~~i~~l~~L~~L~L~~--n~l~~~~p~~ 121 (1035)
|.....+. .+. .+ +.. ...+.+ ..+........++.+.+.. |++++ +|..
T Consensus 365 ~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~ 443 (876)
T 4ecn_A 365 LFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKA 443 (876)
T ss_dssp CBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGG
T ss_pred cccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccc-hhHH
Confidence 43211110 000 00 000 000000 0000001112233333332 45554 5555
Q ss_pred hhhhccccceeccccccCC-----------------CCchhhc--cccccceeecCCCcccCCCCCCcCCCccceEEEEe
Q 039419 122 LGACIKLKNLLLFDNYLSG-----------------NLPVELG--KLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGL 182 (1035)
Q Consensus 122 l~~l~~L~~L~l~~n~l~~-----------------~~p~~l~--~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l 182 (1035)
++++++|++|+|++|.+++ .+|..++ ++++|++|++++|. +.+.+|..++++++|+.|++
T Consensus 444 l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~-l~~~iP~~l~~L~~L~~L~L 522 (876)
T 4ecn_A 444 IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP-NMTQLPDFLYDLPELQSLNI 522 (876)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT-TCCSCCGGGGGCSSCCEEEC
T ss_pred HhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC-CCccChHHHhCCCCCCEEEC
Confidence 5555555555555555554 2666665 66667777766664 45566666677777777777
Q ss_pred cccc-ccc-cCcccccccc-------cccceeecccccccCCcc--ccccCcCCceEEecCCcCCCCCChhhhcccchhH
Q 039419 183 ADTK-VAG-SLPASLGKLS-------KLQSLSVYTTMLSGEIPP--QIGNCSELVDLFLYENDLSGSLPRELGKLQKLEK 251 (1035)
Q Consensus 183 ~~~~-~~~-~~p~~l~~l~-------~L~~L~l~~n~l~~~~p~--~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 251 (1035)
++|+ +++ .+|..++.++ +|++|++++|.++ .+|. .++++++|+.|+|++|.++ .+| .|+.+++|+.
T Consensus 523 s~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~ 599 (876)
T 4ecn_A 523 ACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTD 599 (876)
T ss_dssp TTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESE
T ss_pred cCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceE
Confidence 7776 666 6777777666 8888888888888 7887 8888888888888888888 777 7888888888
Q ss_pred hhcccccccccCCccccCCCC-CcEEEccCccCCCCCCccccCCCC--CcEEEccCCccccCCCCcc---c--CCCccce
Q 039419 252 MLLWQNNFDGAIPEEIGNCKS-LKTIDLSLNFFSGSLPQSFGNLSS--LEELMLSNNNISGSIPPVL---S--NATSLLQ 323 (1035)
Q Consensus 252 L~l~~n~l~~~~p~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~ 323 (1035)
|+|++|++. .+|..+..+++ |+.|+|++|+|+ .+|..+..++. |+.|+|++|++.+.+|... . .+++|+.
T Consensus 600 L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~ 677 (876)
T 4ecn_A 600 LKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAST 677 (876)
T ss_dssp EECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEE
T ss_pred EECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCE
Confidence 888888888 78888888888 999999999888 67777776654 8899999998887655432 2 3457889
Q ss_pred eccccchhhhhhhhccccCCCCCcC-CCCCCCCcEEeccCcCCCCCCCCCccc--------CcccceEeccccccccCCC
Q 039419 324 LQLDTNQISVFFAWQNKLEGSIPST-LANCRSLEAVDLSHNALTGSLHPGLFQ--------LQNLTKLLLISNGISGLIP 394 (1035)
Q Consensus 324 L~L~~N~i~~l~~~~n~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~~~~~~~--------l~~L~~L~L~~N~i~~~~~ 394 (1035)
|+|++|+|+. +|.. +..+++|+.|+|++|+|+ .+|..+.. +++|+.|+|++|+|+ .+|
T Consensus 678 L~Ls~N~L~~-----------lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp 744 (876)
T 4ecn_A 678 VTLSYNEIQK-----------FPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLS 744 (876)
T ss_dssp EECCSSCCCS-----------CCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCC
T ss_pred EEccCCcCCc-----------cCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cch
Confidence 9999888863 3444 347889999999999998 45554433 238999999999998 445
Q ss_pred CCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCc
Q 039419 395 PEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNS 474 (1035)
Q Consensus 395 ~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 474 (1035)
..+. ...+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+ ++++|+
T Consensus 745 ~~l~------------~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~ls~N~ 793 (876)
T 4ecn_A 745 DDFR------------ATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DAEGNR 793 (876)
T ss_dssp GGGS------------TTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CTTCCB
T ss_pred HHhh------------hccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------Cccccc
Confidence 4432 0256779999999999997 68888899999999998854 344444
Q ss_pred ccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCccc
Q 039419 475 FSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLG 549 (1035)
Q Consensus 475 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 549 (1035)
+.+.+|..|..+++|+.|+|++|+| +.+|..++ ..+..|+|++|.+..+.+..+.....+..+.|.+|++.
T Consensus 794 l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~---~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 794 ILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT---PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp CCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC---SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred ccccChHHHhcCCCCCEEECCCCCC-CccCHhhc---CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 4444444444455555555555554 34444433 12234555555554444445555555666666666654
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=6.8e-51 Score=443.70 Aligned_cols=259 Identities=28% Similarity=0.470 Sum_probs=210.6
Q ss_pred hccccCCeeeeeCCcEEEEEEEC------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCcee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIV 759 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 759 (1035)
++|...+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+++|++++|||||
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--------------~~~~~f~~E~~il~~l~HpnIV 78 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD--------------NARKDFHREAELLTNLQHEHIV 78 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCH--------------HHHHHHHHHHHHHTTCCCTTBC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCCh--------------HHHHHHHHHHHHHHhCCCCCCc
Confidence 56888899999999999999864 478899999964321 1356899999999999999999
Q ss_pred eEEeEEEcCCcceEEEEeCCCCChhhhhhhcC-----------CCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCC
Q 039419 760 RFLGCCWNRNTRLLMYDYMPNGSLGSLLHERR-----------DSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIK 828 (1035)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDik 828 (1035)
+++|+|.+++..|+|||||++|+|.++++..+ ...+++..+..|+.|||+||+|||++ +|+|||||
T Consensus 79 ~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlK 155 (299)
T 4asz_A 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLA 155 (299)
T ss_dssp CEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred cEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccC
Confidence 99999999999999999999999999997643 24599999999999999999999999 99999999
Q ss_pred cccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCC
Q 039419 829 ANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTI 907 (1035)
Q Consensus 829 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~ 907 (1035)
|+|||++.++.+||+|||+|+.....+.........||+.|||||++.+..++.++|||||||++|||+| |+.||....
T Consensus 156 p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~ 235 (299)
T 4asz_A 156 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 235 (299)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred HhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999999999999987765544444445679999999999999999999999999999999999 899997542
Q ss_pred CCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 908 PEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
. ..+...+..... ...|.. +. ..+.+++.+||+.||++|||++||.+.|+++.+
T Consensus 236 ~--~~~~~~i~~~~~---------~~~p~~-~~--~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 236 N--NEVIECITQGRV---------LQRPRT-CP--QEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp H--HHHHHHHHHTCC---------CCCCTT-CC--HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHcCCC---------CCCCcc-ch--HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 2 222333222110 111111 11 134567888999999999999999999988754
No 14
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.5e-51 Score=444.92 Aligned_cols=258 Identities=25% Similarity=0.398 Sum_probs=209.9
Q ss_pred hccccCCeeeeeCCcEEEEEEEC------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCcee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIV 759 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 759 (1035)
..++..+.||+|+||+||+|++. +++.||||++...... ...++|.+|+.++++++|||||
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~-------------~~~~~f~~E~~il~~l~HpNIV 92 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG-------------PLREEFRHEAMLRARLQHPNVV 92 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC--------------CHHHHHHHHHHHHHCCCTTBC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh-------------HHHHHHHHHHHHHHhCCCCCCC
Confidence 45667789999999999999863 4688999999643211 2357899999999999999999
Q ss_pred eEEeEEEcCCcceEEEEeCCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhccCCCCeecc
Q 039419 760 RFLGCCWNRNTRLLMYDYMPNGSLGSLLHERR--------------DSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHR 825 (1035)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHr 825 (1035)
+++|+|.+++..|+|||||++|+|.++++.+. ...+++..+..|+.|||+||+|||++ +||||
T Consensus 93 ~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHR 169 (308)
T 4gt4_A 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHK 169 (308)
T ss_dssp CEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCC
Confidence 99999999999999999999999999996542 13589999999999999999999999 99999
Q ss_pred CCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 039419 826 DIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPID 904 (1035)
Q Consensus 826 Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~ 904 (1035)
||||+|||+++++.+||+|||+|+.....+.........||+.|||||++.+..++.++|||||||++|||+| |+.||.
T Consensus 170 DLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~ 249 (308)
T 4gt4_A 170 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249 (308)
T ss_dssp CCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999997765554444556789999999999999999999999999999999998 899997
Q ss_pred CCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 039419 905 PTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEI 973 (1035)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~ 973 (1035)
.... .++...+.... ....++.. . ..+.+++.+||+.||++|||++||++.|+.+
T Consensus 250 ~~~~--~~~~~~i~~~~---------~~~~p~~~-~--~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 250 GYSN--QDVVEMIRNRQ---------VLPCPDDC-P--AWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp TCCH--HHHHHHHHTTC---------CCCCCTTC-C--HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCH--HHHHHHHHcCC---------CCCCcccc-h--HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 5432 23333332211 01111111 1 2245678899999999999999999998754
No 15
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.1e-50 Score=446.12 Aligned_cols=259 Identities=29% Similarity=0.475 Sum_probs=202.4
Q ss_pred hccccCCeeeeeCCcEEEEEEEC------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCcee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIV 759 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 759 (1035)
++|...+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+++|++++|||||
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~--------------~~~~~f~~E~~il~~l~HpnIV 106 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE--------------SARQDFQREAELLTMLQHQHIV 106 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSH--------------HHHHHHHHHHHHHTTCCCTTBC
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCH--------------HHHHHHHHHHHHHHhCCCCCCC
Confidence 46777889999999999999864 478899999964321 2356899999999999999999
Q ss_pred eEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC-------------CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccC
Q 039419 760 RFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD-------------SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRD 826 (1035)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrD 826 (1035)
+++|+|.+.+..|+|||||++|+|.++++.... ..++|.+++.|+.|||+||+|||++ +|+|||
T Consensus 107 ~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRD 183 (329)
T 4aoj_A 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRD 183 (329)
T ss_dssp CEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred cEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---Ceeccc
Confidence 999999999999999999999999999976432 3589999999999999999999998 999999
Q ss_pred CCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCC
Q 039419 827 IKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDP 905 (1035)
Q Consensus 827 ikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~ 905 (1035)
|||+|||++.++.+||+|||+|+.....+.........||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 184 LKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~ 263 (329)
T 4aoj_A 184 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263 (329)
T ss_dssp CCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred ccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence 999999999999999999999997765544444456789999999999999999999999999999999999 8999975
Q ss_pred CCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 906 TIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
... ......+..... . ..|.. +. ..+.+++.+||++||++|||++||+++|+.+.+
T Consensus 264 ~~~--~~~~~~i~~g~~------~---~~p~~-~~--~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 264 LSN--TEAIDCITQGRE------L---ERPRA-CP--PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp SCH--HHHHHHHHHTCC------C---CCCTT-CC--HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCH--HHHHHHHHcCCC------C---CCccc-cc--HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 422 222222222110 0 11111 11 233557888999999999999999999998854
No 16
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.2e-51 Score=451.76 Aligned_cols=254 Identities=19% Similarity=0.310 Sum_probs=202.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
+++|++.+.||+|+||+||+|++. +|+.||||++........ ..+.|.+|+.+|++++|||||++++
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~------------~~~~~~~E~~il~~l~HpnIV~~~~ 90 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK------------EREESRREVAVLANMKHPNIVQYRE 90 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHH------------HHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHH------------HHHHHHHHHHHHHHCCCCCCCcEEE
Confidence 368999999999999999999875 589999999975433221 2568999999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+++..|+|||||+||+|.+++...+...+++..+..|+.||+.||+|||++ ||+||||||+|||++.+|.+||+
T Consensus 91 ~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~ 167 (350)
T 4b9d_A 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLG 167 (350)
T ss_dssp EEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEEC
T ss_pred EEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEc
Confidence 999999999999999999999999877666689999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||+|+...... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+....
T Consensus 168 DFGla~~~~~~~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~~-- 241 (350)
T 4b9d_A 168 DFGIARVLNSTV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--KNLVLKIISGS-- 241 (350)
T ss_dssp STTEESCCCHHH--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTC--
T ss_pred ccccceeecCCc--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCC--
Confidence 999998764322 122356799999999999999999999999999999999999999975421 11111111110
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. +......+ ..+.+++.+||++||++|||++|++++
T Consensus 242 ---~-~~~~~~~s------~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 242 ---F-PPVSLHYS------YDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ---C-CCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---C-CCCCccCC------HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 01111111 123457888999999999999999874
No 17
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.8e-51 Score=441.15 Aligned_cols=253 Identities=18% Similarity=0.229 Sum_probs=208.9
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|++.+.||+|+||+||+|+++ +++.||||++........ ...+.+.+|+++|++++|||||+++++
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~-----------~~~~~~~~E~~il~~l~HpnIv~l~~~ 100 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE-----------NKVPYVTRERDVMSRLDHPFFVKLYFT 100 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCH-----------HHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 57999999999999999999775 589999999965332221 235689999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+++..|+|||||+||+|.++++..+. +++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 101 ~~~~~~~yivmEy~~gG~L~~~i~~~~~--l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~D 175 (311)
T 4aw0_A 101 FQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITD 175 (311)
T ss_dssp EECSSEEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred EEeCCEEEEEEecCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEE
Confidence 9999999999999999999999987654 99999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccch
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
||+|+.+............+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+....
T Consensus 176 FGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~--- 250 (311)
T 4aw0_A 176 FGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIKLE--- 250 (311)
T ss_dssp CTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC---
T ss_pred cCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcCC---
Confidence 9999987654444445578999999999999999999999999999999999999999975421 12222211110
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..+....+ ..+.+++.+||++||++|||++|+..+
T Consensus 251 ----~~~p~~~s------~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 251 ----YDFPEKFF------PKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ----CCCCTTCC------HHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ----CCCCcccC------HHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 01111111 134567888999999999999987543
No 18
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8e-50 Score=434.83 Aligned_cols=261 Identities=26% Similarity=0.368 Sum_probs=199.0
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
+++...+.||+|+||+||+|++.+ .||||+++...... ...+.|.+|+.++++++|||||++++++
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~------------~~~~~f~~E~~il~~l~HpNIV~l~g~~ 101 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTP------------EQFQAFRNEVAVLRKTRHVNILLFMGYM 101 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCH------------HHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCH------------HHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 466778899999999999998763 59999986433221 2356899999999999999999999987
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
.+ +..|+|||||+||+|.++++..+ ..+++..+..|+.|||+||+|||++ +||||||||+|||++.++.+||+||
T Consensus 102 ~~-~~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DF 176 (307)
T 3omv_A 102 TK-DNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp CS-SSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCC
T ss_pred EC-CeEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeec
Confidence 54 56899999999999999997654 3489999999999999999999998 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCccccc---CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM---MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|+|+..............+||+.|||||++.+ ..|+.++|||||||++|||+||+.||...... ..+...+....
T Consensus 177 Gla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-~~~~~~~~~~~- 254 (307)
T 3omv_A 177 GLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQIIFMVGRGY- 254 (307)
T ss_dssp SSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHHHHTTC-
T ss_pred cCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-HHHHHHHhcCC-
Confidence 99987655443334456789999999999753 46899999999999999999999999754321 11111111110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
..+.....+.. +. ..+.+++.+||+.||++|||+.||+++|+.++
T Consensus 255 ----~~p~~~~~~~~-~~--~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 255 ----ASPDLSKLYKN-CP--KAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp ----CCCCSTTSCTT-SC--HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred ----CCCCccccccc-ch--HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 11111111111 11 12345788899999999999999999998775
No 19
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.6e-49 Score=479.05 Aligned_cols=504 Identities=19% Similarity=0.196 Sum_probs=345.2
Q ss_pred CccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChh
Q 039419 18 PCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSS 97 (1035)
Q Consensus 18 ~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~ 97 (1035)
.|.|.|| |+.. +++++ .+|..+. ++|++|+|++|.+++..|..++.+++|++|+|++|++++..|..
T Consensus 3 ~C~~~~~-c~~~---------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~ 69 (549)
T 2z81_A 3 SCDASGV-CDGR---------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDA 69 (549)
T ss_dssp EECTTSE-EECT---------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTT
T ss_pred cCCCCce-EECC---------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhh
Confidence 4999999 9643 34444 5666665 78999999999999888889999999999999999999888889
Q ss_pred hhccccccceEecccCCCCCCchhhhhhccccceeccccccCC-CCchhhccccccceeecCCCcccCCCCCCcCCCccc
Q 039419 98 IGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSG-NLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQS 176 (1035)
Q Consensus 98 i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 176 (1035)
|+++++|++|+|++|++++..|..++.+++|++|+|++|.+++ ..|..++++++|++|++++|..+....+..++.+++
T Consensus 70 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~ 149 (549)
T 2z81_A 70 FYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTS 149 (549)
T ss_dssp TTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCE
T ss_pred ccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccc
Confidence 9999999999999999997777779999999999999999985 356788899999999999886333333356778888
Q ss_pred eEEEEeccccccccCcccccccccccceeecccccccCCcccc-ccCcCCceEEecCCcCCCCC--C-hhhhcccchhHh
Q 039419 177 LLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQI-GNCSELVDLFLYENDLSGSL--P-RELGKLQKLEKM 252 (1035)
Q Consensus 177 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l-~~l~~L~~L~L~~n~l~~~~--~-~~l~~l~~L~~L 252 (1035)
|++|++++|.+.+..|..++.+++|++|+++.|.+. .+|..+ ..+++|+.|++++|.+++.. + .....+++|+.|
T Consensus 150 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L 228 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKL 228 (549)
T ss_dssp EEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEE
T ss_pred cCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccce
Confidence 888888888888777888888888888888887776 444443 45777888888887777532 1 112234555555
Q ss_pred hcccccccccCC----ccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceecccc
Q 039419 253 LLWQNNFDGAIP----EEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDT 328 (1035)
Q Consensus 253 ~l~~n~l~~~~p----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 328 (1035)
++++|.+.+..+ ..+..+++|+.|++++|.+.+..... ......+..+.+|+.|++.+
T Consensus 229 ~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~------------------~~~~~~~~~l~~L~~L~l~~ 290 (549)
T 2z81_A 229 AFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFN------------------PSESDVVSELGKVETVTIRR 290 (549)
T ss_dssp EEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCC------------------CCTTTCCCCCTTCCEEEEES
T ss_pred eccccccchhHHHHHHHHhhhhcccccccccccccccccccc------------------ccchhhhhhhcccccccccc
Confidence 666655554322 22334455555555555554321000 00011233444455555555
Q ss_pred chhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCc-ccCcccceEeccccccccCCCCCCCCCCcceeEe
Q 039419 329 NQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGL-FQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLR 407 (1035)
Q Consensus 329 N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 407 (1035)
+.+..... ...++..+..+++|+.|++++|.++ .+|..+ ..+++|++|++++|++++..|...
T Consensus 291 ~~i~~~~~-----~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---------- 354 (549)
T 2z81_A 291 LHIPQFYL-----FYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNS---------- 354 (549)
T ss_dssp CBCSCGGG-----SCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHH----------
T ss_pred cccchhhh-----cccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccch----------
Confidence 44432211 0112222333466777777777776 455444 457778888888887775432110
Q ss_pred eeccCCCCccceeecCCCccCCCCc--ccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCC
Q 039419 408 LMSFGNCTQLQMLNLSNNTLGGTLP--SSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGR 485 (1035)
Q Consensus 408 ~~~~~~l~~L~~L~L~~N~l~~~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 485 (1035)
..+..+++|++|+|++|++++..+ ..+..+++|++|++++|+++. +|..+..+++|++|++++|+|+ .+|..+.
T Consensus 355 -~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~- 430 (549)
T 2z81_A 355 -ACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIR-VVKTCIP- 430 (549)
T ss_dssp -TCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCS-CCCTTSC-
T ss_pred -hhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCcc-cccchhc-
Confidence 013345667788888888775432 457777788888888888874 5666777778888888888876 3343332
Q ss_pred CCCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccc-cccccCCCcEE
Q 039419 486 CESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLL-ALSGLDNLVSL 564 (1035)
Q Consensus 486 l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L 564 (1035)
++|++|+|++|+|++.+ . .+. .+..|+|++|+|+. +|. ...+++|++|+|++|+|++.++ .+..+++|+.|
T Consensus 431 -~~L~~L~Ls~N~l~~~~-~---~l~-~L~~L~Ls~N~l~~-ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 502 (549)
T 2z81_A 431 -QTLEVLDVSNNNLDSFS-L---FLP-RLQELYISRNKLKT-LPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKI 502 (549)
T ss_dssp -TTCSEEECCSSCCSCCC-C---CCT-TCCEEECCSSCCSS-CCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEE
T ss_pred -CCceEEECCCCChhhhc-c---cCC-hhcEEECCCCccCc-CCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEE
Confidence 57788888888887432 1 222 23467788888774 443 4568899999999999998765 58889999999
Q ss_pred eccCCcCcccCCChhhh
Q 039419 565 NVSYNNFTGYLPDSKLF 581 (1035)
Q Consensus 565 ~ls~N~l~~~~p~~~~~ 581 (1035)
++++|++++.+|....+
T Consensus 503 ~l~~N~~~~~~~~~~~l 519 (549)
T 2z81_A 503 WLHTNPWDCSCPRIDYL 519 (549)
T ss_dssp ECCSSCBCCCHHHHHHH
T ss_pred EecCCCccCCCccHHHH
Confidence 99999999887754333
No 20
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-49 Score=477.07 Aligned_cols=520 Identities=20% Similarity=0.199 Sum_probs=411.1
Q ss_pred cCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhh
Q 039419 45 PFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGA 124 (1035)
Q Consensus 45 ~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~ 124 (1035)
.+|..+. +.++.|+|++|.+++..+..|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++.
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence 3455443 46899999999999777778999999999999999999777788999999999999999998666788999
Q ss_pred hccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccc---
Q 039419 125 CIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKL--- 201 (1035)
Q Consensus 125 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L--- 201 (1035)
+++|++|++++|.+++..+..++++++|++|++++|......+|..++++++|++|++++|.+.+..+..++.+++|
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~ 178 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTC
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchh
Confidence 99999999999999854445799999999999999974333578889999999999999999998888889999888
Q ss_pred -cceeecccccccCCccccccCcCCceEEecCCcCCC-CCChhhhcccchhHhhcccccc------cccCCccccCCC--
Q 039419 202 -QSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSG-SLPRELGKLQKLEKMLLWQNNF------DGAIPEEIGNCK-- 271 (1035)
Q Consensus 202 -~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~l------~~~~p~~~~~l~-- 271 (1035)
+.|++++|.+.+..|..+..+ +|+.|++++|.... .++..+..+++++.+.+..+.+ .......+..+.
T Consensus 179 ~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l 257 (570)
T 2z63_A 179 NLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257 (570)
T ss_dssp CCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGS
T ss_pred hhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhcccccc
Confidence 889999999997777777665 79999999886442 2344556666665555443222 212222333333
Q ss_pred CCcEEEccCc-cCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCC
Q 039419 272 SLKTIDLSLN-FFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLA 350 (1035)
Q Consensus 272 ~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~ 350 (1035)
.++.+++++| .+.+..+..|..+++|++|++++|.+. .+|..+..+ +|++|++++|++.. +|. .
T Consensus 258 ~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~-----------l~~--~ 322 (570)
T 2z63_A 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQ-----------FPT--L 322 (570)
T ss_dssp EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSS-----------CCB--C
T ss_pred chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccc-----------cCc--c
Confidence 3567777777 777778888888999999999999888 567777777 89999999888763 333 4
Q ss_pred CCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCC
Q 039419 351 NCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGT 430 (1035)
Q Consensus 351 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~ 430 (1035)
.+++|+.|++++|.+.+..+. ..+++|++|++++|++++... ....+.++++|++|++++|++++.
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~------------~~~~~~~~~~L~~L~l~~n~l~~~ 388 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGC------------CSQSDFGTTSLKYLDLSFNGVITM 388 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEE------------EEHHHHTCSCCCEEECCSCSEEEE
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCcccc------------ccccccccCccCEEECCCCccccc
Confidence 678899999999988755544 678899999999998874320 012355678899999999999865
Q ss_pred CcccccCCCCccEEEcCCCccCCCCc-hhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCc-Cccchhhh
Q 039419 431 LPSSLASLTRLQVLDISVNQFVGLIP-ESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLS-GKIPVELF 508 (1035)
Q Consensus 431 ~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~ 508 (1035)
.+. +..+++|+.|++++|++.+..+ ..|..+++|++|++++|++.+..|..|..+++|++|+|++|+++ +.+|..+.
T Consensus 389 ~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~ 467 (570)
T 2z63_A 389 SSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 467 (570)
T ss_dssp EEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred ccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhh
Confidence 444 8889999999999999987765 57888999999999999998888888999999999999999987 56887776
Q ss_pred hhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccc-cccccCCCcEEeccCCcCcccCCChhhh-hcccc
Q 039419 509 EIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLL-ALSGLDNLVSLNVSYNNFTGYLPDSKLF-RQLSA 586 (1035)
Q Consensus 509 ~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~-~~l~~ 586 (1035)
.+..+. .|++++|++++..|..|..+++|++|+|++|++++.+. .+..+++|+.|++++|++++.+|....+ ..+..
T Consensus 468 ~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~ 546 (570)
T 2z63_A 468 ELRNLT-FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 546 (570)
T ss_dssp TCTTCC-EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHH
T ss_pred cccCCC-EEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHh
Confidence 666654 79999999998889999999999999999999999774 5889999999999999999999876444 33322
Q ss_pred --ccccccccCCCCC
Q 039419 587 --TEMAGNQGLCSRG 599 (1035)
Q Consensus 587 --~~~~~N~~~c~~~ 599 (1035)
..+.+.+ .|..+
T Consensus 547 ~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 547 NSQKEQGSA-KCSGS 560 (570)
T ss_dssp TGGGEESCC-BBTTT
T ss_pred ccccCCCch-hhCCC
Confidence 2344555 67654
No 21
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.6e-50 Score=439.31 Aligned_cols=250 Identities=22% Similarity=0.355 Sum_probs=203.7
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
+.|+..+.||+|+||+||+|+++ +|+.||||++..... ...+.+.+|+.+|++++|||||+++++
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--------------~~~~~~~~Ei~il~~l~HpnIV~l~~~ 139 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--------------QRRELLFNEVVIMRDYQHENVVEMYNS 139 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--------------SSGGGGHHHHHHHHHCCCTTBCCEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--------------hHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 46888899999999999999876 599999999964321 123568899999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+++..|+|||||+||+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|
T Consensus 140 ~~~~~~~~ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 213 (346)
T 4fih_A 140 YLVGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSD 213 (346)
T ss_dssp EEETTEEEEEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred EEECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEec
Confidence 99999999999999999999999763 389999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccch
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
||+|+.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||....+ ......+....
T Consensus 214 FGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~--- 286 (346)
T 4fih_A 214 FGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNL--- 286 (346)
T ss_dssp CTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSS---
T ss_pred CcCceecCCCC--CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCC---
Confidence 99998765433 223467899999999999999999999999999999999999999975421 12222222110
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...... ...+ ...+.+++.+||.+||++|||++|++++
T Consensus 287 ---~~~~~~--~~~~--s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 287 ---PPRLKN--LHKV--SPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp ---CCCCSC--GGGS--CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---CCCCCc--cccC--CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001110 0111 1233457888999999999999999875
No 22
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.9e-49 Score=430.08 Aligned_cols=256 Identities=22% Similarity=0.280 Sum_probs=204.4
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.+.|...++||+|+||+||+|+++ +|+.||||++..+. ...+|+.++++++|||||++++
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-------------------~~~~E~~il~~l~HpnIV~l~~ 117 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------------------FRVEELVACAGLSSPRIVPLYG 117 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-------------------CCTHHHHTTTTCCCTTBCCEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-------------------hHHHHHHHHHhCCCCCCCcEEE
Confidence 456888899999999999999876 58999999996421 1236999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC-ceEE
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF-EPYI 842 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~-~~kl 842 (1035)
++.+++..|+|||||+||+|.++++..+. +++..+..++.||+.||+|||++ +|+||||||+|||++.+| ++||
T Consensus 118 ~~~~~~~~~ivmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl 192 (336)
T 4g3f_A 118 AVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAAL 192 (336)
T ss_dssp EEEETTEEEEEECCCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEE
T ss_pred EEEECCEEEEEEeccCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEE
Confidence 99999999999999999999999987654 99999999999999999999999 999999999999999987 6999
Q ss_pred eeccCccccccCCcc---ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 843 ADFGLAKLVVEGDFA---RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
+|||+|+........ ......+||+.|||||++.+..|+.++||||+||++|||++|+.||........ ...+..
T Consensus 193 ~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~i~~ 270 (336)
T 4g3f_A 193 CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL--CLKIAS 270 (336)
T ss_dssp CCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC--HHHHHH
T ss_pred eeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--HHHHHc
Confidence 999999977554321 123356899999999999999999999999999999999999999976543321 111211
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
..... ..+....+ ..+.+++.+||++||++|||+.|+++++.....+
T Consensus 271 ~~~~~----~~~~~~~s------~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 271 EPPPI----REIPPSCA------PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp SCCGG----GGSCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCc----hhcCccCC------HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 11100 01111111 1234577889999999999999999998776543
No 23
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.7e-49 Score=422.52 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=189.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|++.+.||+|+||+||+|++. +|+.||||++........ ...+++.+|++++++++|||||++++
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-----------~~~~~~~~Ei~il~~l~HpnIv~~~~ 80 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS-----------DMQGRIEREISYLRLLRHPHIIKLYD 80 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-----------------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCH-----------HHHHHHHHHHHHHHHCCCCCCCeEEE
Confidence 468999999999999999999775 589999999976443322 23568999999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+++..|+||||+ +|+|.+++...+. +++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 81 ~~~~~~~~~ivmEy~-~g~L~~~l~~~~~--l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~ 154 (275)
T 3hyh_A 81 VIKSKDEIIMVIEYA-GNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIA 154 (275)
T ss_dssp EEECSSEEEEEEECC-CEEHHHHHHHSCS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEEC
T ss_pred EEEECCEEEEEEeCC-CCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEe
Confidence 999999999999999 7899999977654 99999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|||+|+...+.. .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||..... ......+....
T Consensus 155 DFGla~~~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--~~~~~~i~~~~- 228 (275)
T 3hyh_A 155 DFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNISNGV- 228 (275)
T ss_dssp CSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC-
T ss_pred ecCCCeecCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCC-
Confidence 999998765432 2335789999999999988776 5799999999999999999999975321 11112111111
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..++...+ ....+++.+||++||++|||++|++++
T Consensus 229 ------~~~p~~~s------~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 ------YTLPKFLS------PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ------CCCCTTSC------HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ------CCCCCCCC------HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 01111111 123457888999999999999999885
No 24
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-48 Score=421.30 Aligned_cols=250 Identities=26% Similarity=0.368 Sum_probs=195.1
Q ss_pred cccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEEE
Q 039419 688 LVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 766 (1035)
Q Consensus 688 ~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 766 (1035)
|+..+.||+|+||+||+|.+. +++.||||++....... ...++|.+|++++++++|||||++++++.
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~------------~~~~~~~~E~~il~~l~HpnIV~~~~~~~ 95 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK------------SERQRFKEEAEMLKGLQHPNIVRFYDSWE 95 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH------------HHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH------------HHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence 356678999999999999776 58899999996543222 13568999999999999999999999986
Q ss_pred c----CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC-CCceE
Q 039419 767 N----RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP-EFEPY 841 (1035)
Q Consensus 767 ~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~-~~~~k 841 (1035)
+ ++..|+|||||+||+|.++++..+. +++..+..++.||+.||+|||+++. +|+||||||+|||++. ++.+|
T Consensus 96 ~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~ylH~~~~-~IiHRDlKp~NILl~~~~g~vK 172 (290)
T 3fpq_A 96 STVKGKKCIVLVTELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVK 172 (290)
T ss_dssp EEETTEEEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTSSS-CCCCCCCCGGGEEESSTTSCEE
T ss_pred eccCCCcEEEEEEeCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCC-CEEecccChhheeEECCCCCEE
Confidence 5 3457999999999999999987654 8999999999999999999999821 3999999999999984 78999
Q ss_pred EeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhc
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKR 921 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 921 (1035)
|+|||+|+..... .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||...... ..+...+....
T Consensus 173 l~DFGla~~~~~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-~~~~~~i~~~~ 246 (290)
T 3fpq_A 173 IGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRVTSGV 246 (290)
T ss_dssp ECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHHTTTC
T ss_pred EEeCcCCEeCCCC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-HHHHHHHHcCC
Confidence 9999999864332 2345789999999998765 6999999999999999999999999643221 11111111100
Q ss_pred cchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 922 GAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.........+ + .+.+++.+||++||++|||++|++++
T Consensus 247 -----~~~~~~~~~~---~---~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 247 -----KPASFDKVAI---P---EVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----CCGGGGGCCC---H---HHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----CCCCCCccCC---H---HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0001111111 1 23457888999999999999999874
No 25
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-48 Score=440.87 Aligned_cols=250 Identities=22% Similarity=0.367 Sum_probs=204.4
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
+.|+..+.||+|+||+||+|+++ +|+.||||++...... ..+.+.+|+.+|++++|||||+++++
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--------------~~~~~~~Ei~il~~l~HpnIV~l~~~ 216 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--------------RRELLFNEVVIMRDYQHENVVEMYNS 216 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--------------SGGGHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--------------HHHHHHHHHHHHHhCCCCCCCceEEE
Confidence 56889999999999999999876 5899999999643211 24568899999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
|.+++..|+|||||+||+|.++++..+ +++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|
T Consensus 217 ~~~~~~~~iVmEy~~gG~L~~~i~~~~---l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~D 290 (423)
T 4fie_A 217 YLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSD 290 (423)
T ss_dssp EEETTEEEEEEECCTTEEHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECC
T ss_pred EEECCEEEEEEeCCCCCcHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEec
Confidence 999999999999999999999997543 89999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccch
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
||+|+.+.... ......+||+.|||||++.+..|+.++|||||||++|||++|+.||....+ ......+....
T Consensus 291 FGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~--- 363 (423)
T 4fie_A 291 FGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNL--- 363 (423)
T ss_dssp CTTCEECCSSC--CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSC---
T ss_pred CccceECCCCC--ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCC---
Confidence 99998765433 223467899999999999999999999999999999999999999975422 12222222111
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...+.... .+ ...+.+++.+||.+||++|||++|++++
T Consensus 364 ---~~~~~~~~--~~--s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 364 ---PPRLKNLH--KV--SPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp ---CCCCSCTT--SS--CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---CCCCcccc--cC--CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01111100 01 1123457888999999999999999875
No 26
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.7e-49 Score=428.35 Aligned_cols=250 Identities=22% Similarity=0.277 Sum_probs=195.3
Q ss_pred hccccCCeeeeeCCcEEEEEEEC----CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME----NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
++|++.+.||+|+||+||+|+.. .++.||||++........ ...++.+|++++++++|||||++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~------------~~~~~~~E~~il~~l~HpnIv~l 91 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR------------DRVRTKMERDILVEVNHPFIVKL 91 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE------------ECC------CCCCCCCCTTEECE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH------------HHHHHHHHHHHHHHCCCCCCCeE
Confidence 46999999999999999999763 478999999975433221 12368899999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++++.+++..|+|||||+||+|.+++...+. +++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+|
T Consensus 92 ~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~--l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vK 166 (304)
T 3ubd_A 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIK 166 (304)
T ss_dssp EEEEEETTEEEEEECCCTTCEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEE
T ss_pred EEEEEECCEEEEEEEcCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEE
Confidence 9999999999999999999999999987654 99999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhc
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKR 921 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 921 (1035)
|+|||+|+...... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+....
T Consensus 167 l~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~~ 242 (304)
T 3ubd_A 167 LTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETMTMILKAK 242 (304)
T ss_dssp EESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC
T ss_pred ecccccceeccCCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHHHHHHcCC
Confidence 99999998654432 223467899999999999999999999999999999999999999975422 12222211110
Q ss_pred cchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 039419 922 GAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTM-----KDVAAM 969 (1035)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~-----~el~~~ 969 (1035)
.......+ ..+.+++.+||++||++|||+ +|++++
T Consensus 243 -------~~~p~~~s------~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 243 -------LGMPQFLS------PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp -------CCCCTTSC------HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred -------CCCCCcCC------HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 01111111 123457888999999999984 566653
No 27
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.7e-48 Score=434.22 Aligned_cols=263 Identities=24% Similarity=0.366 Sum_probs=211.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC------CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCC-Cc
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN------GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRH-KN 757 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pn 757 (1035)
.++|++.+.||+|+||+||+|++.. ++.||||++....... ..+.|.+|+.+|++++| ||
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~-------------~~~~~~~E~~il~~l~hhpn 129 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-------------EHRALMSELKILIHIGHHLN 129 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHH-------------HHHHHHHHHHHHHHHCCCTT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChH-------------HHHHHHHHHHHHHHcCCCCc
Confidence 3789999999999999999997643 3689999996543322 24679999999999975 99
Q ss_pred eeeEEeEEEcC-CcceEEEEeCCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhccCCCCe
Q 039419 758 IVRFLGCCWNR-NTRLLMYDYMPNGSLGSLLHERR--------------DSCLEWELRYRIILGAAQGLAYLHHDCVPPI 822 (1035)
Q Consensus 758 iv~l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 822 (1035)
||+++|+|.++ +..|+|||||++|+|.++++..+ ...+++..+..++.|||+||+|||++ +|
T Consensus 130 IV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~i 206 (353)
T 4ase_A 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KC 206 (353)
T ss_dssp BCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred EEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---Ce
Confidence 99999999765 56899999999999999997643 23489999999999999999999999 99
Q ss_pred eccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 039419 823 VHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQ 901 (1035)
Q Consensus 823 vHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~ 901 (1035)
|||||||+|||++.++.+||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.
T Consensus 207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~ 286 (353)
T 4ase_A 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286 (353)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCC
Confidence 9999999999999999999999999987655443334456789999999999999999999999999999999998 999
Q ss_pred CCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 902 PIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 902 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
||...... ..+...+..... . ..|+...+ .+.+++.+||+.||++|||++||+++|+.+.+.
T Consensus 287 Pf~~~~~~-~~~~~~i~~g~~------~---~~p~~~~~---~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 287 PYPGVKID-EEFCRRLKEGTR------M---RAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp SSTTCCCS-HHHHHHHHHTCC------C---CCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHH-HHHHHHHHcCCC------C---CCCccCCH---HHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 99764322 222222222110 0 11111112 345578889999999999999999999988654
No 28
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-47 Score=463.70 Aligned_cols=506 Identities=20% Similarity=0.196 Sum_probs=427.6
Q ss_pred ceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceecccc
Q 039419 57 QKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDN 136 (1035)
Q Consensus 57 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n 136 (1035)
+.++.++.+++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|++++..|..++.+++|++|+|++|
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 86 (570)
T 2z63_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (570)
T ss_dssp TEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred cEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCC
Confidence 45667777788 6887664 57999999999999777889999999999999999999766788999999999999999
Q ss_pred ccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccc-cCcccccccccccceeecccccccCC
Q 039419 137 YLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAG-SLPASLGKLSKLQSLSVYTTMLSGEI 215 (1035)
Q Consensus 137 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-~~p~~l~~l~~L~~L~l~~n~l~~~~ 215 (1035)
.+++..|..|+.+++|++|++++|. +....+..++.+++|++|++++|.+.+ .+|..|+++++|++|++++|.+++..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~n~-l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~ 165 (570)
T 2z63_A 87 PIQSLALGAFSGLSSLQKLVAVETN-LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSC-CCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEEC
T ss_pred cCCccCHhhhcCccccccccccccc-cccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceec
Confidence 9997777899999999999999996 443334469999999999999999987 47999999999999999999999888
Q ss_pred ccccccCcCC----ceEEecCCcCCCCCChhhhcccchhHhhccccccc-ccCCccccCCCCCcEEEccCccCC------
Q 039419 216 PPQIGNCSEL----VDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFD-GAIPEEIGNCKSLKTIDLSLNFFS------ 284 (1035)
Q Consensus 216 p~~l~~l~~L----~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~------ 284 (1035)
+..++.+.+| +.|++++|.+++..+..|... +|+.|++++|... ..++..+..+++++.+.+..+.+.
T Consensus 166 ~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 244 (570)
T 2z63_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244 (570)
T ss_dssp GGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCE
T ss_pred HHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhh
Confidence 8889999988 899999999998888777766 7999999988543 245667788888888777654332
Q ss_pred CCCCccccCCC--CCcEEEccCC-ccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEecc
Q 039419 285 GSLPQSFGNLS--SLEELMLSNN-NISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLS 361 (1035)
Q Consensus 285 ~~~~~~~~~l~--~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls 361 (1035)
......|..++ .++.+++++| .+.+..+..|..+++|++|++++|+++ .+|..+..+ +|++|+++
T Consensus 245 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-----------~l~~~~~~~-~L~~L~l~ 312 (570)
T 2z63_A 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-----------RVKDFSYNF-GWQHLELV 312 (570)
T ss_dssp ECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-----------SCCBCCSCC-CCSEEEEE
T ss_pred hcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-----------hhhhhhccC-CccEEeec
Confidence 22223344433 3577888888 788888999999999999999999886 467788888 99999999
Q ss_pred CcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCC--cccccCCC
Q 039419 362 HNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTL--PSSLASLT 439 (1035)
Q Consensus 362 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~l~ 439 (1035)
+|.++ .+|. ..+++|++|++++|.+.+..+. ..+++|++|++++|++++.. +..+..++
T Consensus 313 ~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~----------------~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~ 373 (570)
T 2z63_A 313 NCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE----------------VDLPSLEFLDLSRNGLSFKGCCSQSDFGTT 373 (570)
T ss_dssp SCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC----------------CBCTTCCEEECCSSCCBEEEEEEHHHHTCS
T ss_pred cCccc-ccCc--ccccccCEEeCcCCcccccccc----------------ccCCCCCEEeCcCCccCccccccccccccC
Confidence 99998 4444 4788999999999998765443 34578999999999998654 67889999
Q ss_pred CccEEEcCCCccCCCCchhccCccccchhhccCCcccccCc-cccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceee
Q 039419 440 RLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIP-SSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLN 518 (1035)
Q Consensus 440 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~ 518 (1035)
+|++|++++|++.+..+. |..+++|+.|++++|.+.+..+ ..+..+++|++|+|++|.+++..|..+..+..+. .|+
T Consensus 374 ~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~ 451 (570)
T 2z63_A 374 SLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE-VLK 451 (570)
T ss_dssp CCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC-EEE
T ss_pred ccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCc-EEE
Confidence 999999999999977655 9999999999999999997766 5789999999999999999977777776666554 799
Q ss_pred ccCccCC-CCCCccccCCccccEEeccCCcccCc-cccccccCCCcEEeccCCcCcccCCCh-hhhhccccccccccccC
Q 039419 519 LSWNALS-GAIPPQISALNKLSILDLSHNKLGGD-LLALSGLDNLVSLNVSYNNFTGYLPDS-KLFRQLSATEMAGNQGL 595 (1035)
Q Consensus 519 Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~l~~~~~~~N~~~ 595 (1035)
+++|.++ +.+|..+..+++|++|+|++|++++. +..+..+++|++|++++|++++.+|.. ..+.+++.+++.+|++.
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 9999998 57889999999999999999999987 568999999999999999999987753 45678888999999999
Q ss_pred CCCCC
Q 039419 596 CSRGH 600 (1035)
Q Consensus 596 c~~~~ 600 (1035)
|.++.
T Consensus 532 ~~~~~ 536 (570)
T 2z63_A 532 CSCPR 536 (570)
T ss_dssp CCTTT
T ss_pred CCCcc
Confidence 98764
No 29
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-48 Score=428.60 Aligned_cols=266 Identities=26% Similarity=0.303 Sum_probs=198.6
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||+||+|++. |+.||||++..... ....+.+|+..+.+++|||||++++++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~---------------~~~~~e~Ei~~~~~l~HpNIv~l~g~~ 66 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE---------------RSWFREAEIYQTVMLRHENILGFIAAD 66 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH---------------HHHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch---------------hhHHHHHHHHHHhcCCCCCCCcEEEEE
Confidence 56788899999999999999885 89999999854211 012334566667789999999999999
Q ss_pred EcCC----cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccC-----CCCeeccCCCcccEEEcC
Q 039419 766 WNRN----TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDC-----VPPIVHRDIKANNILIGP 836 (1035)
Q Consensus 766 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivHrDikp~NIll~~ 836 (1035)
.+++ ..|+|||||++|+|.++++... +++..+.+++.|+|+||+|||+++ .++|+||||||+|||++.
T Consensus 67 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~ 143 (303)
T 3hmm_A 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 143 (303)
T ss_dssp EEECSSSEEEEEEEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred EecCCCceEEEEEecCCCCCcHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECC
Confidence 8754 4699999999999999997653 899999999999999999999752 348999999999999999
Q ss_pred CCceEEeeccCccccccCCcc--ccccccCCcccccCCcccccC------CCCccccchhHHHHHHHHHhCCCCCCCCCC
Q 039419 837 EFEPYIADFGLAKLVVEGDFA--RSSNTVAGSYGYIAPEYGYMM------KITEKSDVYSYGVVVLEVLTGKQPIDPTIP 908 (1035)
Q Consensus 837 ~~~~kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGvvl~elltg~~P~~~~~~ 908 (1035)
++++||+|||+|+........ ......+||+.|||||++.+. .++.++|||||||++|||+||+.||.....
T Consensus 144 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~ 223 (303)
T 3hmm_A 144 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 223 (303)
T ss_dssp TSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCC
T ss_pred CCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccc
Confidence 999999999999876544321 122356799999999997654 467899999999999999999887653221
Q ss_pred C----------chhHHHHHHHhccchhhhcccccCCCc---ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 909 E----------GLHIVDWVRQKRGAIEVLDKSLRARPE---VEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 909 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
. ......+... ......+...+ ...+....+.+++.+||+.||++||||.||++.|+++.+
T Consensus 224 ~~~p~~~~~~~~~~~~~~~~~------~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 224 YQLPYYDLVPSDPSVEEMRKV------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCCTTTTTSCSSCCHHHHHHH------HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccchhcccccchHHHHHHH------HhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 1 1111111111 11111111111 112333345678999999999999999999999998865
Q ss_pred h
Q 039419 976 E 976 (1035)
Q Consensus 976 ~ 976 (1035)
+
T Consensus 298 ~ 298 (303)
T 3hmm_A 298 Q 298 (303)
T ss_dssp C
T ss_pred H
Confidence 4
No 30
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.7e-48 Score=464.85 Aligned_cols=486 Identities=18% Similarity=0.161 Sum_probs=364.3
Q ss_pred eEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccc
Q 039419 58 KLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNY 137 (1035)
Q Consensus 58 ~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 137 (1035)
..++++++++ .+|+.+. ++|++|+|++|++++..|..++++++|++|+|++|++++..|..++.+++|++|+|++|.
T Consensus 9 ~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 9 VCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred eEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCc
Confidence 3577889998 7888775 799999999999998888999999999999999999997777899999999999999999
Q ss_pred cCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCc-ccccccccccceeecccccccCCc
Q 039419 138 LSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLP-ASLGKLSKLQSLSVYTTMLSGEIP 216 (1035)
Q Consensus 138 l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p 216 (1035)
+++..|..|+++++|++|++++|.......|..++.+++|++|++++|.+.+.+| ..|+++++|++|++++|.+++..|
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 165 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 165 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred cCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccCh
Confidence 9977777799999999999999973332455667777777777777777433443 567777777777777777777677
Q ss_pred cccccCcCCceEEecCCcCCCCCChhh-hcccchhHhhcccccccccC--C-ccccCCCCCcEEEccCccCCCCCC----
Q 039419 217 PQIGNCSELVDLFLYENDLSGSLPREL-GKLQKLEKMLLWQNNFDGAI--P-EEIGNCKSLKTIDLSLNFFSGSLP---- 288 (1035)
Q Consensus 217 ~~l~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~l~~n~l~~~~--p-~~~~~l~~L~~L~L~~n~l~~~~~---- 288 (1035)
..+..+++|+.|++++|.+. .+|..+ ..+++|++|++++|++.+.. | .....+++|+.|++++|.+++..+
T Consensus 166 ~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~ 244 (549)
T 2z81_A 166 QSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELL 244 (549)
T ss_dssp TTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHH
T ss_pred hhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHH
Confidence 77777777777777777765 333332 34556666666666655421 1 112234455555555555543222
Q ss_pred ccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCC
Q 039419 289 QSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGS 368 (1035)
Q Consensus 289 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 368 (1035)
..+..+++|+.|++++|.+.+... +.......+..+++|+.|++.++.+...
T Consensus 245 ~~~~~~~~L~~l~l~~~~~~~~~~----------------------------~~~~~~~~~~~l~~L~~L~l~~~~i~~~ 296 (549)
T 2z81_A 245 KLLRYILELSEVEFDDCTLNGLGD----------------------------FNPSESDVVSELGKVETVTIRRLHIPQF 296 (549)
T ss_dssp GGGGGCTTCCEEEEESCEEECCSC----------------------------CCCCTTTCCCCCTTCCEEEEESCBCSCG
T ss_pred HHhhhhcccccccccccccccccc----------------------------ccccchhhhhhhcccccccccccccchh
Confidence 122334455555555554443211 0001123466788999999999988632
Q ss_pred C-----CCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCc---ccccCCCC
Q 039419 369 L-----HPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLP---SSLASLTR 440 (1035)
Q Consensus 369 ~-----~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~l~~ 440 (1035)
. +..+....+|++|++++|+++. +|..+ +.++++|++|+|++|++++..| ..+..+++
T Consensus 297 ~~~~~l~~~~~~~~~L~~L~l~~n~l~~-ip~~~-------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~ 362 (549)
T 2z81_A 297 YLFYDLSTVYSLLEKVKRITVENSKVFL-VPCSF-------------SQHLKSLEFLDLSENLMVEEYLKNSACKGAWPS 362 (549)
T ss_dssp GGSCCCCHHHHHSTTCCEEEEESSCCCC-CCHHH-------------HHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTT
T ss_pred hhcccchhhhhhcccceEEEeccCcccc-CCHHH-------------HhcCccccEEEccCCccccccccchhhhhcccc
Confidence 1 1112345789999999999873 33322 2356789999999999997664 34788999
Q ss_pred ccEEEcCCCccCCCCc--hhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceee
Q 039419 441 LQVLDISVNQFVGLIP--ESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLN 518 (1035)
Q Consensus 441 L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~ 518 (1035)
|++|+|++|++++..+ ..+..+++|++|++++|+|+ .+|..+..+++|++|+|++|+|+ .+|..+. ..+..|+
T Consensus 363 L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~---~~L~~L~ 437 (549)
T 2z81_A 363 LQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP---QTLEVLD 437 (549)
T ss_dssp CCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC---TTCSEEE
T ss_pred CcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc---CCceEEE
Confidence 9999999999997653 56899999999999999998 67888999999999999999998 5665443 3456899
Q ss_pred ccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcccCCC-hhhhhccccccccccccCCC
Q 039419 519 LSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGYLPD-SKLFRQLSATEMAGNQGLCS 597 (1035)
Q Consensus 519 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~l~~~~~~~N~~~c~ 597 (1035)
+++|+|++.+ ..+++|++|+|++|+|+..+. ...+++|++|+|++|++++.+|. ...+..++.+++.+|++.|.
T Consensus 438 Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 438 VSNNNLDSFS----LFLPRLQELYISRNKLKTLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CCSSCCSCCC----CCCTTCCEEECCSSCCSSCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCCCChhhhc----ccCChhcEEECCCCccCcCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 9999999764 578999999999999997665 56799999999999999998887 35678888999999999997
Q ss_pred CC
Q 039419 598 RG 599 (1035)
Q Consensus 598 ~~ 599 (1035)
++
T Consensus 513 ~~ 514 (549)
T 2z81_A 513 CP 514 (549)
T ss_dssp HH
T ss_pred Cc
Confidence 54
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-47 Score=456.01 Aligned_cols=455 Identities=21% Similarity=0.175 Sum_probs=290.7
Q ss_pred ceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceecccc
Q 039419 57 QKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDN 136 (1035)
Q Consensus 57 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n 136 (1035)
++|++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..++.+++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46777777777 5776665 67777777777777666677777777777777777777666777777777777777777
Q ss_pred ccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccc--cceeeccccc--c
Q 039419 137 YLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKL--QSLSVYTTML--S 212 (1035)
Q Consensus 137 ~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L--~~L~l~~n~l--~ 212 (1035)
+++ .+|.. .+++|++|++++|......+|..++.+++|++|++++|.+.+ ..+..+++| ++|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 777 56655 677777777777753222455666666666666666666654 345556666 7777777777 5
Q ss_pred cCCccccccCc-CCceEEecCCcCCCCCCh-hhhcccchhHhhccccc-------ccccCCccccCCCCCcEEEccCccC
Q 039419 213 GEIPPQIGNCS-ELVDLFLYENDLSGSLPR-ELGKLQKLEKMLLWQNN-------FDGAIPEEIGNCKSLKTIDLSLNFF 283 (1035)
Q Consensus 213 ~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~l~~n~-------l~~~~p~~~~~l~~L~~L~L~~n~l 283 (1035)
+..|..+..+. +...+++++|.+.+.++. .+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 66666666654 344556666766654443 45667777777777776 555554 566777777777777766
Q ss_pred CCCCCcccc---CCCCCcEEEccCCccccCCCCcc-----cCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCC
Q 039419 284 SGSLPQSFG---NLSSLEELMLSNNNISGSIPPVL-----SNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSL 355 (1035)
Q Consensus 284 ~~~~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L 355 (1035)
++..+..+. ..++|++|++++|++.+.+|..+ ..+++|+.+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l----------------------------- 283 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQV----------------------------- 283 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEE-----------------------------
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccc-----------------------------
Confidence 543221111 13467777777777666555555 44444444444
Q ss_pred cEEeccCcCCCCCCC-CCcccC---cccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCC
Q 039419 356 EAVDLSHNALTGSLH-PGLFQL---QNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTL 431 (1035)
Q Consensus 356 ~~L~Ls~N~l~~~~~-~~~~~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~ 431 (1035)
++|.+ .+| ..+..+ .+|+.|++++|.+.... + +..+++|++|+|++|++++..
T Consensus 284 -----~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~---~-------------~~~l~~L~~L~Ls~n~l~~~~ 340 (520)
T 2z7x_B 284 -----VSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML---C-------------PSKISPFLHLDFSNNLLTDTV 340 (520)
T ss_dssp -----EECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC---C-------------CSSCCCCCEEECCSSCCCTTT
T ss_pred -----cccce--ecchhhhhcccccCceeEEEcCCCcccccc---c-------------hhhCCcccEEEeECCccChhh
Confidence 44444 122 222222 34555555555443211 0 123345666666666666656
Q ss_pred cccccCCCCccEEEcCCCccCC--CCchhccCccccchhhccCCcccccCcc-ccCCCCCCcEEEcCCCcCcCccchhhh
Q 039419 432 PSSLASLTRLQVLDISVNQFVG--LIPESFGQLASLNRLILSKNSFSGAIPS-SLGRCESLQSLDLSSNKLSGKIPVELF 508 (1035)
Q Consensus 432 ~~~l~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 508 (1035)
|..+..+++|++|+|++|++++ ..|..|..+++|++|++++|++++.+|. .+..+++|++|+|++|++++.+|..+.
T Consensus 341 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 420 (520)
T 2z7x_B 341 FENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP 420 (520)
T ss_dssp TTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC
T ss_pred hhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc
Confidence 6666666666666666666665 2345566666666666666666653333 366666677777777766655554442
Q ss_pred hhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCcccc-ccccCCCcEEeccCCcCcccCCC
Q 039419 509 EIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLA-LSGLDNLVSLNVSYNNFTGYLPD 577 (1035)
Q Consensus 509 ~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~ls~N~l~~~~p~ 577 (1035)
..+..|++++|+++ .+|..+..+++|++|+|++|+|+..+.. +..+++|++|++++|++++.++.
T Consensus 421 ---~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 421 ---PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp ---TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ---ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 23346677777776 5566666889999999999999987765 88899999999999999987654
No 32
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3e-47 Score=464.31 Aligned_cols=470 Identities=16% Similarity=0.236 Sum_probs=381.9
Q ss_pred cccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceec
Q 039419 54 SFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLL 133 (1035)
Q Consensus 54 ~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 133 (1035)
.+++.|+|+++++.|.+|++++.|++|++|+|++|.+. ..+..++.. .+.-.+|... +.+|+ +++
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~~-----------~~~~~~~~~~--~~~l~-l~l 145 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEK-VNERLFGPK-----------GISANMSDEQ--KQKMR-MHY 145 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGG-GTCCSBSTT-----------SBCTTCCHHH--HHHHH-THH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccc-cCCcccccc-----------ccccCchHHH--HHHHH-hhH
Confidence 35778888888888888888888888888888887664 111111110 1112466655 77888 999
Q ss_pred cccccCCCCchhhcc-ccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceee--cccc
Q 039419 134 FDNYLSGNLPVELGK-LVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSV--YTTM 210 (1035)
Q Consensus 134 ~~n~l~~~~p~~l~~-l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l--~~n~ 210 (1035)
++|.+.+.+|..+.. +..+..+++.... +. ......++.+.+ .+|+
T Consensus 146 ~~~~l~~~~~~~~~~~~~~l~~~~l~~~~-------------------------~~------~~~~~~l~~l~l~~~~n~ 194 (636)
T 4eco_A 146 QKTFVDYDPREDFSDLIKDCINSDPQQKS-------------------------IK------KSSRITLKDTQIGQLSNN 194 (636)
T ss_dssp HHHHTCCCGGGGSCHHHHHHHHHCTTSCC-------------------------CC------CCCCCCCCTTTTTCCSCE
T ss_pred HHhhhccCchhhHHHHHHHHhhcCccccc-------------------------cc------cccccchhhhhhccccCC
Confidence 999999888877764 3344444443321 00 011122333333 4689
Q ss_pred cccCCccccccCcCCceEEecCCcCCCC-----------------CChhhh--cccchhHhhcccccccccCCccccCCC
Q 039419 211 LSGEIPPQIGNCSELVDLFLYENDLSGS-----------------LPRELG--KLQKLEKMLLWQNNFDGAIPEEIGNCK 271 (1035)
Q Consensus 211 l~~~~p~~l~~l~~L~~L~L~~n~l~~~-----------------~~~~l~--~l~~L~~L~l~~n~l~~~~p~~~~~l~ 271 (1035)
+++ +|..++++++|++|+|++|.+++. +|..++ ++++|++|++++|++.+.+|..|++++
T Consensus 195 l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 273 (636)
T 4eco_A 195 ITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALP 273 (636)
T ss_dssp EEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCS
T ss_pred Ccc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCC
Confidence 997 999999999999999999999985 899998 999999999999999999999999999
Q ss_pred CCcEEEccCcc-CCC-CCCccccCC------CCCcEEEccCCccccCCCC--cccCCCccceeccccchhhhhhhhcccc
Q 039419 272 SLKTIDLSLNF-FSG-SLPQSFGNL------SSLEELMLSNNNISGSIPP--VLSNATSLLQLQLDTNQISVFFAWQNKL 341 (1035)
Q Consensus 272 ~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~i~~l~~~~n~l 341 (1035)
+|++|+|++|+ +++ .+|..++++ ++|++|++++|+++ .+|. .|.++++|++|++++|+++
T Consensus 274 ~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~--------- 343 (636)
T 4eco_A 274 EMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLE--------- 343 (636)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCE---------
T ss_pred CCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCc---------
Confidence 99999999998 998 788888876 99999999999999 7888 8999999999999998875
Q ss_pred CCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcc-cceEeccccccccCCCCCCCCCCcceeEeeeccCCCCcccee
Q 039419 342 EGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQN-LTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQML 420 (1035)
Q Consensus 342 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L 420 (1035)
|.+| .+..+++|++|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..+ .+++|++|
T Consensus 344 -g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~------------~l~~L~~L 407 (636)
T 4eco_A 344 -GKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAK------------SVSVMSAI 407 (636)
T ss_dssp -EECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTT------------CSSCEEEE
T ss_pred -cchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhc------------ccCccCEE
Confidence 4567 8999999999999999999 78888999999 999999999999 566665443 23579999
Q ss_pred ecCCCccCCCCccccc-------CCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCC------
Q 039419 421 NLSNNTLGGTLPSSLA-------SLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCE------ 487 (1035)
Q Consensus 421 ~L~~N~l~~~~~~~l~-------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~------ 487 (1035)
+|++|++++..|..+. .+++|++|+|++|+++.+++..+..+++|+.|+|++|+|+.+.+..+....
T Consensus 408 ~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l 487 (636)
T 4eco_A 408 DFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNT 487 (636)
T ss_dssp ECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTG
T ss_pred ECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccccccccc
Confidence 9999999999999888 888999999999999987777788899999999999999944444444333
Q ss_pred -CCcEEEcCCCcCcCccchhhh--hhccCcceeeccCccCCCCCCccccCCccccEEecc------CCcccC-ccccccc
Q 039419 488 -SLQSLDLSSNKLSGKIPVELF--EIEGLDISLNLSWNALSGAIPPQISALNKLSILDLS------HNKLGG-DLLALSG 557 (1035)
Q Consensus 488 -~L~~L~Ls~N~l~~~~p~~~~--~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~------~N~l~~-~~~~~~~ 557 (1035)
+|++|+|++|+|+ .+|..++ .+..+. .|+|++|++++ +|..+..+++|++|+|+ +|++.+ .+..+..
T Consensus 488 ~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~-~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~ 564 (636)
T 4eco_A 488 YLLTSIDLRFNKLT-KLSDDFRATTLPYLV-GIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITL 564 (636)
T ss_dssp GGCCEEECCSSCCC-BCCGGGSTTTCTTCC-EEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGG
T ss_pred CCccEEECcCCcCC-ccChhhhhccCCCcC-EEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhc
Confidence 9999999999999 8998887 555554 79999999998 88999999999999995 466655 5568999
Q ss_pred cCCCcEEeccCCcCcccCCChhhhhccccccccccccCCCCCCC
Q 039419 558 LDNLVSLNVSYNNFTGYLPDSKLFRQLSATEMAGNQGLCSRGHE 601 (1035)
Q Consensus 558 l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~~~ 601 (1035)
+++|+.|+|++|++ +.+|.. .+++++.+++.+|++.|-....
T Consensus 565 l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~~~~ 606 (636)
T 4eco_A 565 CPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISIDLSY 606 (636)
T ss_dssp CSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEECTT
T ss_pred CCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCccccHHh
Confidence 99999999999999 566654 4588999999999999865433
No 33
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.4e-47 Score=467.17 Aligned_cols=483 Identities=18% Similarity=0.201 Sum_probs=257.0
Q ss_pred cccceEeecCcccCCCCCCCCCCCCCCceeeC-CCCCCCCCCChhhhcc---------ccccceEec-------ccCCCC
Q 039419 54 SFLQKLIISGSNLTGPISPDLGDCTQLTTIDV-SSNSLVGGVPSSIGKL---------INLQDLILN-------SNQLTG 116 (1035)
Q Consensus 54 ~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~l-s~n~l~~~~p~~i~~l---------~~L~~L~L~-------~n~l~~ 116 (1035)
.+++.|+|+++++.|.+|++|+.|++|++|+| ++|.+.|..|-....+ ..++...+. ...+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 56889999999999999999999999999999 8888776644221111 001100000 001110
Q ss_pred CCchhh-----------hhhccccceeccc--cccCCCCchhhccccccceeecCCCcccCC-CCCCcCCCccceEEEEe
Q 039419 117 EIPKEL-----------GACIKLKNLLLFD--NYLSGNLPVELGKLVNLEVIRAGGNKDIAG-KIPYEIGDCQSLLVVGL 182 (1035)
Q Consensus 117 ~~p~~l-----------~~l~~L~~L~l~~--n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~-~~~~~~~~l~~L~~L~l 182 (1035)
.++..+ .....++.+.+.. |.+++ +|..|++|++|++|++++|. +.+ .++..+.. .
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~-Lsg~~i~~~~~~--------~ 472 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSP-FTYDNIAVDWED--------A 472 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCC-CCGGGBSSSCSC--------T
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCc-CCCCcccccccc--------c
Confidence 011111 1122333333333 55554 56666666666666666554 222 11111111 0
Q ss_pred ccccccccCccccc--ccccccceeecccccccCCccccccCcCCceEEecCCc-CCC-CCChhhhccc-------chhH
Q 039419 183 ADTKVAGSLPASLG--KLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYEND-LSG-SLPRELGKLQ-------KLEK 251 (1035)
Q Consensus 183 ~~~~~~~~~p~~l~--~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~l~~l~-------~L~~ 251 (1035)
+.+...+.+|..++ ++++|++|+|++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|..++.++ +|+.
T Consensus 473 s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~ 552 (876)
T 4ecn_A 473 NSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI 552 (876)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCE
T ss_pred ccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccE
Confidence 11222234677766 77777777777777777777777777777777777776 665 5666666554 5555
Q ss_pred hhcccccccccCCc--cccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCc-cceecccc
Q 039419 252 MLLWQNNFDGAIPE--EIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATS-LLQLQLDT 328 (1035)
Q Consensus 252 L~l~~n~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~ 328 (1035)
|+|++|++. .+|. .|.++++|+.|+|++|+++ .+| .|+++++|+.|+|++|++. .+|..|.++++ |+.|+|++
T Consensus 553 L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~ 628 (876)
T 4ecn_A 553 FYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSH 628 (876)
T ss_dssp EECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCS
T ss_pred EEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcC
Confidence 555555555 4444 4555555555555555555 344 4555555555555555554 44444444444 55555544
Q ss_pred chhhhhhhhccccCCCCCcCCCCCCC--CcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeE
Q 039419 329 NQISVFFAWQNKLEGSIPSTLANCRS--LEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRL 406 (1035)
Q Consensus 329 N~i~~l~~~~n~l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 406 (1035)
|+|+ .+|..+..++. |+.|+|++|++++.+ |.....+.
T Consensus 629 N~L~-----------~lp~~~~~~~~~~L~~L~Ls~N~l~g~i------------------------p~l~~~l~----- 668 (876)
T 4ecn_A 629 NKLK-----------YIPNIFNAKSVYVMGSVDFSYNKIGSEG------------------------RNISCSMD----- 668 (876)
T ss_dssp SCCC-----------SCCSCCCTTCSSCEEEEECCSSCTTTTS------------------------SSCSSCTT-----
T ss_pred CCCC-----------cCchhhhccccCCCCEEECcCCcCCCcc------------------------ccchhhhc-----
Confidence 4443 22333333322 445555555444333 22111110
Q ss_pred eeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccC-------ccccchhhccCCcccccC
Q 039419 407 RLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQ-------LASLNRLILSKNSFSGAI 479 (1035)
Q Consensus 407 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-------l~~L~~L~Ls~N~l~~~~ 479 (1035)
...+++|+.|+|++|+++...+..+..+++|+.|+|++|+|+.+++..+.. +++|+.|+|++|+|+ .+
T Consensus 669 ----~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~l 743 (876)
T 4ecn_A 669 ----DYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SL 743 (876)
T ss_dssp ----TCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CC
T ss_pred ----cccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cc
Confidence 001223444444444444222222234444444444444444322222221 124444444444444 33
Q ss_pred ccccC--CCCCCcEEEcCCCcCcCccchhhhhhccCcceeec------cCccCCCCCCccccCCccccEEeccCCcccCc
Q 039419 480 PSSLG--RCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNL------SWNALSGAIPPQISALNKLSILDLSHNKLGGD 551 (1035)
Q Consensus 480 ~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~L------s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 551 (1035)
|..+. .+++|+.|+|++|+|++ +|..++.+..+. .|+| ++|++.+.+|..|..+++|+.|+|++|+|...
T Consensus 744 p~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~-~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~~I 821 (876)
T 4ecn_A 744 SDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLK-AFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRKV 821 (876)
T ss_dssp CGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCC-EEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBC
T ss_pred hHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCC-EEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCCCcc
Confidence 44443 44444444444444443 444444433332 3444 56889999999999999999999999999767
Q ss_pred cccccccCCCcEEeccCCcCcccCCChh-hhhccccccccccccCC--CCC
Q 039419 552 LLALSGLDNLVSLNVSYNNFTGYLPDSK-LFRQLSATEMAGNQGLC--SRG 599 (1035)
Q Consensus 552 ~~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~~~l~~~~~~~N~~~c--~~~ 599 (1035)
|..+. ++|+.|+|++|++....+... .........+.+|+..| +|+
T Consensus 822 p~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 822 DEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp CSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCG
T ss_pred CHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCC
Confidence 76655 699999999999987655431 22334455667776654 554
No 34
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.5e-47 Score=414.46 Aligned_cols=253 Identities=21% Similarity=0.328 Sum_probs=188.4
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|++.+.||+|+||+||+|+++ +|+.||||++...... ...+.+.+|+++|++++|||||++++
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-------------~~~~~~~~E~~il~~l~HpnIV~~~~ 70 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE-------------LAREKVMREVKALAKLEHPGIVRYFN 70 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSH-------------HHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCH-------------HHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 467999999999999999999876 5899999998643211 13567999999999999999999999
Q ss_pred EEEcCC------------cceEEEEeCCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcc
Q 039419 764 CCWNRN------------TRLLMYDYMPNGSLGSLLHERRD-SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKAN 830 (1035)
Q Consensus 764 ~~~~~~------------~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~ 830 (1035)
++.+.+ ..|+|||||+||+|.++++.+.. ...++..+..++.||+.||+|||++ +|+||||||+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~ 147 (299)
T 4g31_A 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPS 147 (299)
T ss_dssp EEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGG
T ss_pred EEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHH
Confidence 997654 36899999999999999986543 2356677889999999999999999 9999999999
Q ss_pred cEEEcCCCceEEeeccCccccccCCcc----------ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCC
Q 039419 831 NILIGPEFEPYIADFGLAKLVVEGDFA----------RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGK 900 (1035)
Q Consensus 831 NIll~~~~~~kl~DFG~a~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~ 900 (1035)
|||++.++.+||+|||+|+........ ......+||+.|||||++.+..|+.++|||||||++|||++
T Consensus 148 NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~-- 225 (299)
T 4g31_A 148 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-- 225 (299)
T ss_dssp GEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred HeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence 999999999999999999877543221 11234679999999999999999999999999999999996
Q ss_pred CCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 901 QPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 901 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
||... ......+... ... ..++...........++.+||++||++|||+.|++++
T Consensus 226 -Pf~~~----~~~~~~~~~~------~~~---~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 226 -PFSTQ----MERVRTLTDV------RNL---KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -CCSSH----HHHHHHHHHH------HTT---CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -CCCCc----cHHHHHHHHH------hcC---CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 77531 1111111110 000 0111111222334568889999999999999999873
No 35
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.1e-46 Score=448.28 Aligned_cols=456 Identities=20% Similarity=0.141 Sum_probs=333.4
Q ss_pred EEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEeccc
Q 039419 33 TEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSN 112 (1035)
Q Consensus 33 ~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n 112 (1035)
+.+++++++++ .+|..+. ++|++|+|++|.+++..|..++.+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 36889999998 5888777 89999999999999777788999999999999999999777999999999999999999
Q ss_pred CCCCCCchhhhhhccccceeccccccCC-CCchhhccccccceeecCCCcccCCCCCCcCCCccce--EEEEeccccc--
Q 039419 113 QLTGEIPKELGACIKLKNLLLFDNYLSG-NLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSL--LVVGLADTKV-- 187 (1035)
Q Consensus 113 ~l~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L--~~L~l~~~~~-- 187 (1035)
+++ .+|.. .+++|++|+|++|.+++ .+|..++++++|++|++++|. +.+ ..+..+++| +.|++++|.+
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~-l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTH-LEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESS-CCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcc-cch---hhccccccceeeEEEeecccccc
Confidence 999 78877 89999999999999986 578999999999999999997 333 346667777 9999999999
Q ss_pred cccCcccccccc-cccceeecccccccCCcc-ccccCcCCceEEecCCc-------CCCCCChhhhcccchhHhhccccc
Q 039419 188 AGSLPASLGKLS-KLQSLSVYTTMLSGEIPP-QIGNCSELVDLFLYEND-------LSGSLPRELGKLQKLEKMLLWQNN 258 (1035)
Q Consensus 188 ~~~~p~~l~~l~-~L~~L~l~~n~l~~~~p~-~l~~l~~L~~L~L~~n~-------l~~~~~~~l~~l~~L~~L~l~~n~ 258 (1035)
.+..|..+..+. +...+++++|.+.+.++. .+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 888898888876 455678888888776654 67789999999999997 665555 78899999999999998
Q ss_pred ccccCCcccc---CCCCCcEEEccCccCCCCCCccc-----cCCCCCcEEEccCCccccCCCCcccCC---Cccceeccc
Q 039419 259 FDGAIPEEIG---NCKSLKTIDLSLNFFSGSLPQSF-----GNLSSLEELMLSNNNISGSIPPVLSNA---TSLLQLQLD 327 (1035)
Q Consensus 259 l~~~~p~~~~---~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~ 327 (1035)
+.+..+..+. ..++|++|++++|++++.+|..+ .++++|+.+++++|.+ ......+..+ .+|+.|+++
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEE
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcC
Confidence 8764333221 24699999999999998899888 9999999999999999 2322344333 456666666
Q ss_pred cchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEe
Q 039419 328 TNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLR 407 (1035)
Q Consensus 328 ~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 407 (1035)
+|++..+ ..+..+++|++|++++|++++..|..+..+++|++|++++|+|++..
T Consensus 311 ~n~l~~~------------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~-------------- 364 (520)
T 2z7x_B 311 GTRMVHM------------LCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELS-------------- 364 (520)
T ss_dssp SSCCCCC------------CCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHH--------------
T ss_pred CCccccc------------cchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccc--------------
Confidence 6655421 11145555566666666655545555555555555555555444210
Q ss_pred eeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCC-CCchhccCccccchhhccCCcccccCccccCCC
Q 039419 408 LMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVG-LIPESFGQLASLNRLILSKNSFSGAIPSSLGRC 486 (1035)
Q Consensus 408 ~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 486 (1035)
.+|..+..+++|++|++++|++++ +++..|..+++|+.|++++|++++..|..+.
T Consensus 365 ----------------------~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-- 420 (520)
T 2z7x_B 365 ----------------------KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP-- 420 (520)
T ss_dssp ----------------------HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--
T ss_pred ----------------------cchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--
Confidence 233445555555555555555555 2222355555555555555555544444443
Q ss_pred CCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCcc
Q 039419 487 ESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDL 552 (1035)
Q Consensus 487 ~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 552 (1035)
++|++|+|++|+|+ .+|..++.+..+. .|++++|+++++.+..|..+++|++|+|++|++.+..
T Consensus 421 ~~L~~L~Ls~N~l~-~ip~~~~~l~~L~-~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 421 PRIKVLDLHSNKIK-SIPKQVVKLEALQ-ELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCC-EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCCEEECCCCccc-ccchhhhcCCCCC-EEECCCCcCCccCHHHhccCCcccEEECcCCCCcccC
Confidence 45666666666665 5565555444433 5666666666444445888999999999999999865
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.6e-45 Score=449.41 Aligned_cols=557 Identities=20% Similarity=0.179 Sum_probs=354.9
Q ss_pred CCcccCCCCCCCCCCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCcee
Q 039419 4 IPSALSNWNPSDSNPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTI 83 (1035)
Q Consensus 4 ~~~~l~~w~~~~~~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L 83 (1035)
+...+++|..+. |..|+.-.|...+. ..+-++.+++ .+|..+. +++++|||++|.|++..+.+|..+++|++|
T Consensus 9 ~~~~~~~~~~~~--p~~~~~c~~~~~~~--~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L 81 (635)
T 4g8a_A 9 DDDKLAAANSSI--PESWEPCVEVVPNI--TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVL 81 (635)
T ss_dssp ------------------CCSEEEETTT--EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CcchhhcccCCC--CCCCCCccccCCCC--EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEE
Confidence 345677787654 34555433332221 1233344454 4666554 478999999999997666789999999999
Q ss_pred eCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCccc
Q 039419 84 DVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDI 163 (1035)
Q Consensus 84 ~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~ 163 (1035)
||++|+|++..|..|++|++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|+++++|++|++++|...
T Consensus 82 ~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~ 161 (635)
T 4g8a_A 82 DLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ 161 (635)
T ss_dssp ECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccc
Confidence 99999999666778999999999999999999555567899999999999999999655667999999999999999855
Q ss_pred CCCCCCcCCCccceEEEEeccccccccCccccccccccc----ceeecccccccCCccccccCcCCceEEecCCcCCCC-
Q 039419 164 AGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQ----SLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGS- 238 (1035)
Q Consensus 164 ~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~----~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~- 238 (1035)
...+|..++.+++|+.|++++|++.+..+..+..+.+++ .++++.|.+.. ++........+..+++.+|.....
T Consensus 162 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~-i~~~~~~~~~~~~l~l~~n~~~~~~ 240 (635)
T 4g8a_A 162 SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNV 240 (635)
T ss_dssp CCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE-ECTTTTTTCEEEEEEEESCCSSHHH
T ss_pred cCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccc-cCcccccchhhhhhhhhcccccccc
Confidence 556788899999999999999999988888888877665 57788888884 444444555678888888865522
Q ss_pred CChhhhcccchhHhhccccc------ccccCCccccCCCCCcEEEccCccCCC---CCCccccCCCCCcEEEccCCcccc
Q 039419 239 LPRELGKLQKLEKMLLWQNN------FDGAIPEEIGNCKSLKTIDLSLNFFSG---SLPQSFGNLSSLEELMLSNNNISG 309 (1035)
Q Consensus 239 ~~~~l~~l~~L~~L~l~~n~------l~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~~~~l~~L~~L~L~~N~l~~ 309 (1035)
.+..+..+..++...+..+. +.......+..+..+..+++..+.... .....+..+.+++.+++.+|.+..
T Consensus 241 ~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 320 (635)
T 4g8a_A 241 MKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIER 320 (635)
T ss_dssp HHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEE
T ss_pred cchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccc
Confidence 23345555555544443222 222233444555556666555544331 123345556677777777776654
Q ss_pred CCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEecccccc
Q 039419 310 SIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGI 389 (1035)
Q Consensus 310 ~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i 389 (1035)
.. .+.....|+.|++.+|++..+ ....+..|+.+++++|.+... .....+++|+.|++++|.+
T Consensus 321 ~~--~~~~~~~L~~L~l~~~~~~~~-------------~~~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l 383 (635)
T 4g8a_A 321 VK--DFSYNFGWQHLELVNCKFGQF-------------PTLKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGL 383 (635)
T ss_dssp CG--GGGSCCCCSEEEEESCEESSC-------------CCCBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCC
T ss_pred cc--ccccchhhhhhhcccccccCc-------------CcccchhhhhcccccccCCCC--cccccccccccchhhcccc
Confidence 32 245556677777777766422 123455667777777766532 2334567777777777766
Q ss_pred ccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCc-hhccCccccchh
Q 039419 390 SGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIP-ESFGQLASLNRL 468 (1035)
Q Consensus 390 ~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L 468 (1035)
....+.. ..+..+.+|++|++..|.+.. .+..+..+++|+.+++++|++....+ ..|..+.+++.+
T Consensus 384 ~~~~~~~------------~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l 450 (635)
T 4g8a_A 384 SFKGCCS------------QSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 450 (635)
T ss_dssp BEEEECC------------HHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEE
T ss_pred ccccccc------------cchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccc
Confidence 5321110 112334556666666666652 34455666666666666665544332 345666666666
Q ss_pred hccCCcccccCccccCCCCCCcEEEcCCCcCcCc-cchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCc
Q 039419 469 ILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGK-IPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNK 547 (1035)
Q Consensus 469 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 547 (1035)
++++|.+.+..+..+..++.|+.|+|++|.+.+. +|..+..+.. +..|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 451 ~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~-L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~ 529 (635)
T 4g8a_A 451 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN-LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 529 (635)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT-CCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred cccccccccccccccccchhhhhhhhhhcccccccCchhhhhccc-cCEEECCCCccCCcChHHHcCCCCCCEEECCCCc
Confidence 6666666666666666666666666666654322 3333333333 3356666666666667777777777777777777
Q ss_pred ccCcc-ccccccCCCcEEeccCCcCcccCCChh-hh-hccccccccccccCCCCC
Q 039419 548 LGGDL-LALSGLDNLVSLNVSYNNFTGYLPDSK-LF-RQLSATEMAGNQGLCSRG 599 (1035)
Q Consensus 548 l~~~~-~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~-~~l~~~~~~~N~~~c~~~ 599 (1035)
|++.+ ..|.++++|++|+|++|+|++.+|..- .+ .+++.+++.+|||.|+|.
T Consensus 530 l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 530 FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 77654 456777777777777777777666531 12 456666777777777653
No 37
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-44 Score=407.93 Aligned_cols=264 Identities=23% Similarity=0.290 Sum_probs=199.7
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|++.+.||+|+||+||+|++. +|+.||||++....... ...+++.+|+.+|++++|||||+++++
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~------------~~~~~~~~Ei~il~~l~HpnIv~l~~~ 121 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV------------TNAKRTLRELKILKHFKHDNIIAIKDI 121 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccch------------HHHHHHHHHHHHHHhcCCCCcceEeee
Confidence 57999999999999999999775 59999999996543221 124678899999999999999999999
Q ss_pred EEcC------CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 765 CWNR------NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 765 ~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
+... +..|+|||||+ |+|.+++...+ .+++..+..++.||+.||+|||++ ||+||||||+|||++.++
T Consensus 122 ~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~ 195 (398)
T 4b99_A 122 LRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENC 195 (398)
T ss_dssp CCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTC
T ss_pred eecccccccCCEEEEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCC
Confidence 7643 56799999995 68999997654 499999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCccccccCCc--cccccccCCcccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHH
Q 039419 839 EPYIADFGLAKLVVEGDF--ARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVD 915 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~ 915 (1035)
.+||+|||+|+.+..... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+... .+...
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~--~~~l~ 273 (398)
T 4b99_A 196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY--VHQLQ 273 (398)
T ss_dssp CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH--HHHHH
T ss_pred CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH--HHHHH
Confidence 999999999987644321 2234467899999999997765 568999999999999999999999975422 11111
Q ss_pred HHHHhccc--hhhh-----------cccccCCCcccHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 916 WVRQKRGA--IEVL-----------DKSLRARPEVEIEE-----MLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 916 ~~~~~~~~--~~~~-----------~~~~~~~~~~~~~~-----~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.+....+. .... ...+....+..... .....+++.+||..||++|||++|++++
T Consensus 274 ~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 274 LIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp HHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 11111100 0000 00001111111111 1234668889999999999999999885
No 38
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.2e-43 Score=431.05 Aligned_cols=535 Identities=21% Similarity=0.191 Sum_probs=417.3
Q ss_pred cEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEec
Q 039419 31 FVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILN 110 (1035)
Q Consensus 31 ~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~ 110 (1035)
.++.|++++|+|+...+..|.++++|++|+|++|+|++..+..|+.|++|++|+|++|+|++..+..|.+|++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 57899999999998888899999999999999999997667789999999999999999996666779999999999999
Q ss_pred ccCCCCCCchhhhhhccccceeccccccCC-CCchhhccccccceeecCCCcccCCCCCCcCCCccce----EEEEeccc
Q 039419 111 SNQLTGEIPKELGACIKLKNLLLFDNYLSG-NLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSL----LVVGLADT 185 (1035)
Q Consensus 111 ~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L----~~L~l~~~ 185 (1035)
+|++++..+..++++++|++|+|++|.+.+ .+|..++.+++|++|++++|. +.+..+..+..+.++ ..++++.|
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK-IQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC-CCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcc-ccccccccccchhhhhhhhhhhhcccC
Confidence 999996555679999999999999999975 468889999999999999996 454555666655544 36788999
Q ss_pred cccccCcccccccccccceeeccccccc-CCccccccCcCCceEEecCCc------CCCCCChhhhcccchhHhhccccc
Q 039419 186 KVAGSLPASLGKLSKLQSLSVYTTMLSG-EIPPQIGNCSELVDLFLYEND------LSGSLPRELGKLQKLEKMLLWQNN 258 (1035)
Q Consensus 186 ~~~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~L~~n~------l~~~~~~~l~~l~~L~~L~l~~n~ 258 (1035)
.+....+.. .....++.|++.+|.... ..+..+..+..++...+..+. +.......+..+..+..+.+..+.
T Consensus 212 ~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCccc-ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 998555544 444567889998886553 334566777877777665432 333344455556666555555443
Q ss_pred cc---ccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhh
Q 039419 259 FD---GAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFF 335 (1035)
Q Consensus 259 l~---~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~ 335 (1035)
.. ...+..+..+.+++.+++.+|.+... ..+....+|+.|++.+|.+....+. .+..|+.+++..|.+..
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~-- 363 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGN-- 363 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCC--
T ss_pred hcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCC--
Confidence 32 23445567788999999999998744 3466778999999999999865543 45678888888887652
Q ss_pred hhccccCCCCCcCCCCCCCCcEEeccCcCCCC--CCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCC
Q 039419 336 AWQNKLEGSIPSTLANCRSLEAVDLSHNALTG--SLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGN 413 (1035)
Q Consensus 336 ~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~ 413 (1035)
+.....+++|+.|++++|.+.. ..+..+..+.+|+.|++..|.+....+ .|..
T Consensus 364 ----------~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~---------------~~~~ 418 (635)
T 4g8a_A 364 ----------AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSS---------------NFLG 418 (635)
T ss_dssp ----------BCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECS---------------CCTT
T ss_pred ----------Ccccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccc---------------cccc
Confidence 2345678999999999999863 345556678899999999998875432 2445
Q ss_pred CCccceeecCCCccCCCCc-ccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcc-cccCccccCCCCCCcE
Q 039419 414 CTQLQMLNLSNNTLGGTLP-SSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSF-SGAIPSSLGRCESLQS 491 (1035)
Q Consensus 414 l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~ 491 (1035)
+++|+.+++++|++....+ ..|..+++++.+++++|++.+..+..+..++.|+.|+|++|.+ .+..|..|..+++|++
T Consensus 419 l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~ 498 (635)
T 4g8a_A 419 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498 (635)
T ss_dssp CTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCE
Confidence 6779999999888765443 5678899999999999999999999999999999999999974 4467888999999999
Q ss_pred EEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCcc-cccccc-CCCcEEeccCC
Q 039419 492 LDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDL-LALSGL-DNLVSLNVSYN 569 (1035)
Q Consensus 492 L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l-~~L~~L~ls~N 569 (1035)
|+|++|+|++..|..+..+..+. .|+|++|+|++..|..|..+++|++|||++|+|++.+ ..+..+ ++|+.|+|++|
T Consensus 499 L~Ls~N~L~~l~~~~f~~l~~L~-~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~N 577 (635)
T 4g8a_A 499 LDLSQCQLEQLSPTAFNSLSSLQ-VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 577 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCC-EEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTC
T ss_pred EECCCCccCCcChHHHcCCCCCC-EEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCC
Confidence 99999999976677776666654 7999999999999999999999999999999999976 567777 68999999999
Q ss_pred cCcccCCChhhhhccc---cccccccccCCCCCC
Q 039419 570 NFTGYLPDSKLFRQLS---ATEMAGNQGLCSRGH 600 (1035)
Q Consensus 570 ~l~~~~p~~~~~~~l~---~~~~~~N~~~c~~~~ 600 (1035)
+|++.+.-......++ ..........|..|.
T Consensus 578 p~~C~C~~~~~~~wl~~~~~~~~~~~~~~C~~P~ 611 (635)
T 4g8a_A 578 DFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 611 (635)
T ss_dssp CBCCSGGGHHHHHHHHHTTTTBSCGGGCBBCSST
T ss_pred CCcccCCcHHHHHHHHhCCCccCCCCCceeCCch
Confidence 9998765432222222 111223445677664
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-43 Score=428.14 Aligned_cols=454 Identities=19% Similarity=0.163 Sum_probs=249.3
Q ss_pred EEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEeccc
Q 039419 33 TEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSN 112 (1035)
Q Consensus 33 ~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n 112 (1035)
+.+++++++++. +|..+. ++|++|+|++|.+++..|..++.+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 456666666663 555443 56666666666666544456666666666666666666555666666666666666666
Q ss_pred CCCCCCchhhhhhccccceeccccccCC-CCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccC
Q 039419 113 QLTGEIPKELGACIKLKNLLLFDNYLSG-NLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSL 191 (1035)
Q Consensus 113 ~l~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 191 (1035)
+++ .+|.. .+++|++|+|++|++++ .+|..++++++|++|++++|. +.+.
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~-------------------------l~~~- 161 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAK-------------------------FRQL- 161 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSB-------------------------CCTT-
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCc-------------------------cccC-
Confidence 666 45544 56666666666666653 234556666666666665554 3321
Q ss_pred cccccccccc--cceeeccccc--ccCCccccccCc-CCceEEecCCcCCCCCCh-hhhcccchhHhhccccc-----cc
Q 039419 192 PASLGKLSKL--QSLSVYTTML--SGEIPPQIGNCS-ELVDLFLYENDLSGSLPR-ELGKLQKLEKMLLWQNN-----FD 260 (1035)
Q Consensus 192 p~~l~~l~~L--~~L~l~~n~l--~~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~l~~n~-----l~ 260 (1035)
.+..+++| ++|++++|.+ ++..|..+..+. ....+++++|.+.+.++. .+..+++|+.|++++|+ +.
T Consensus 162 --~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~ 239 (562)
T 3a79_B 162 --DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLM 239 (562)
T ss_dssp --TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHH
T ss_pred --chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHH
Confidence 12222222 4445555444 444444444432 111334455554443332 23345555555555543 12
Q ss_pred ccCCccccCCCCCcEEEccCccCCCCC----CccccCCCCCcEEEccCCccccCCCCcc-----cCCCccceeccccchh
Q 039419 261 GAIPEEIGNCKSLKTIDLSLNFFSGSL----PQSFGNLSSLEELMLSNNNISGSIPPVL-----SNATSLLQLQLDTNQI 331 (1035)
Q Consensus 261 ~~~p~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~i 331 (1035)
+ .+..+..+++|+.|+|+++.+.+.. +.. ...++|++|++++|++.+.+|..+ ..++.|+.+++..|.+
T Consensus 240 ~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~ 317 (562)
T 3a79_B 240 T-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF 317 (562)
T ss_dssp H-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC
T ss_pred H-HHHHHhccCcceEEEecCCcCcHHHHHHHHHh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee
Confidence 1 1234566677777777666654321 111 122467777777777766555554 3444444444433332
Q ss_pred hhhhhhccccCCCCC-cCCC---CCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEe
Q 039419 332 SVFFAWQNKLEGSIP-STLA---NCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLR 407 (1035)
Q Consensus 332 ~~l~~~~n~l~~~~p-~~l~---~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 407 (1035)
. +| ..+. ...+|+.|++++|.+.... ....
T Consensus 318 -~-----------~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~-------------------------------- 351 (562)
T 3a79_B 318 -L-----------FSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPS-------------------------------- 351 (562)
T ss_dssp -S-----------SCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSS--------------------------------
T ss_pred -e-----------cChhhhhhhhccCcceEEEccCCCccccc--CccC--------------------------------
Confidence 0 11 0000 1133455555555443111 0123
Q ss_pred eeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCC--chhccCccccchhhccCCcccccCc-cccC
Q 039419 408 LMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLI--PESFGQLASLNRLILSKNSFSGAIP-SSLG 484 (1035)
Q Consensus 408 ~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 484 (1035)
+++|++|+|++|++++..|..+..+++|++|+|++|+++++. |..|..+++|+.|++++|++++.+| ..+.
T Consensus 352 ------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 425 (562)
T 3a79_B 352 ------PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCA 425 (562)
T ss_dssp ------CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCC
T ss_pred ------CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhc
Confidence 344555555555555555555555666666666666665432 2445556666666666666655233 3355
Q ss_pred CCCCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCcccc-ccccCCCcE
Q 039419 485 RCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLA-LSGLDNLVS 563 (1035)
Q Consensus 485 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~ 563 (1035)
.+++|++|+|++|++++.+|..+. ..+..|+|++|+|+ .+|..+..+++|++|+|++|+|+..+.. +..+++|+.
T Consensus 426 ~l~~L~~L~l~~n~l~~~~~~~l~---~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~ 501 (562)
T 3a79_B 426 WAESILVLNLSSNMLTGSVFRCLP---PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQY 501 (562)
T ss_dssp CCTTCCEEECCSSCCCGGGGSSCC---TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCC
T ss_pred CcccCCEEECCCCCCCcchhhhhc---CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCE
Confidence 566666666666666554444332 22335666666666 3444455888999999999999987765 888999999
Q ss_pred EeccCCcCcccCCCh
Q 039419 564 LNVSYNNFTGYLPDS 578 (1035)
Q Consensus 564 L~ls~N~l~~~~p~~ 578 (1035)
|++++|+|++.++..
T Consensus 502 L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 502 IWLHDNPWDCTCPGI 516 (562)
T ss_dssp EECCSCCBCCCHHHH
T ss_pred EEecCCCcCCCcchH
Confidence 999999999877654
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.8e-44 Score=401.50 Aligned_cols=202 Identities=26% Similarity=0.378 Sum_probs=171.5
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC----CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCc
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME----NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKN 757 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpn 757 (1035)
++.+.|++.+.||+|+||+||+|+++ .++.||||++.... ...++.+|+++++.+ +|||
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----------------~~~~~~~E~~~l~~~~~h~n 81 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----------------HPIRIAAELQCLTVAGGQDN 81 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----------------CHHHHHHHHHHHHHTCSBTT
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----------------CHHHHHHHHHHHHHhcCCCC
Confidence 34577999999999999999999753 46889999985432 135688999999998 6999
Q ss_pred eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 758 IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
||++++++.+.++.|+||||++||+|.++++. +++..+..++.||+.||+|||++ ||+||||||+|||++.+
T Consensus 82 Iv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~~-----l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~ 153 (361)
T 4f9c_A 82 VMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-----LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRR 153 (361)
T ss_dssp BCCCSEEEEETTEEEEEEECCCCCCHHHHHTT-----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETT
T ss_pred CceEEEEEEECCEEEEEEeCCCcccHHHHHcC-----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCC
Confidence 99999999999999999999999999999842 89999999999999999999999 99999999999999877
Q ss_pred -CceEEeeccCccccccCCcc--------------------------ccccccCCcccccCCcccccC-CCCccccchhH
Q 039419 838 -FEPYIADFGLAKLVVEGDFA--------------------------RSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSY 889 (1035)
Q Consensus 838 -~~~kl~DFG~a~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~Sl 889 (1035)
+.+||+|||+|+...+.... ......+||+.|||||++.+. .++.++||||+
T Consensus 154 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSl 233 (361)
T 4f9c_A 154 LKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSA 233 (361)
T ss_dssp TTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHH
T ss_pred CCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhh
Confidence 79999999999865432210 112345799999999998765 58999999999
Q ss_pred HHHHHHHHhCCCCCCCCCC
Q 039419 890 GVVVLEVLTGKQPIDPTIP 908 (1035)
Q Consensus 890 Gvvl~elltg~~P~~~~~~ 908 (1035)
||++|||++|+.||.....
T Consensus 234 G~il~ell~G~~Pf~~~~~ 252 (361)
T 4f9c_A 234 GVIFLSLLSGRYPFYKASD 252 (361)
T ss_dssp HHHHHHHHHTCSSSSCCSS
T ss_pred HHHHHHHHHCCCCCCCCCC
Confidence 9999999999999975443
No 41
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.7e-44 Score=418.55 Aligned_cols=252 Identities=19% Similarity=0.194 Sum_probs=199.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHH---HHHHHHHhcCCCCceee
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSF---SAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~E~~~l~~l~hpniv~ 760 (1035)
+++|.+.++||+|+||+||+|+++ +|+.||||++........ .....+ ..++.+++.++|||||+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~-----------~~~~~~~~E~~~l~ll~~~~HP~IV~ 256 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-----------QGETLALNERIMLSLVSTGDCPFIVC 256 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHHHHSSSCCTTBCC
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchh-----------hhHHHHHHHHHHHHHHhhCCCCCEeE
Confidence 367999999999999999999876 589999999965432221 112233 34467778889999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
++++|.+++..|+|||||+||+|.+++...+. +++..+..++.||+.||+|||++ |||||||||+|||++.+|++
T Consensus 257 l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~--l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~v 331 (689)
T 3v5w_A 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHV 331 (689)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCE
T ss_pred EEEEEEECCEEEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCE
Confidence 99999999999999999999999999987654 99999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccc-cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch-hHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY-MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL-HIVDWVR 918 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~-~~~~~~~ 918 (1035)
||+|||+|+...... ....+||+.|||||++. +..|+.++||||+||++|||++|+.||........ .+...+.
T Consensus 332 KL~DFGlA~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~ 407 (689)
T 3v5w_A 332 RISDLGLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407 (689)
T ss_dssp EECCCTTCEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH
T ss_pred EecccceeeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Confidence 999999998765432 23578999999999986 45799999999999999999999999975432221 1111111
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPT-----MKDVAAM 969 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs-----~~el~~~ 969 (1035)
.. ........+ ..+.+++.+||.+||++|++ ++||.++
T Consensus 408 ~~-------~~~~p~~~S------~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 408 TM-------AVELPDSFS------PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HC-------CCCCCTTSC------HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CC-------CCCCCccCC------HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 10 011111111 22345788899999999998 6888774
No 42
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.8e-43 Score=423.64 Aligned_cols=440 Identities=18% Similarity=0.168 Sum_probs=303.9
Q ss_pred CcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEe
Q 039419 30 NFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLIL 109 (1035)
Q Consensus 30 ~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L 109 (1035)
..++.|+++++++.+..|..+..+++|++|+|++|.+++..|+.|+.+++|++|||++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 36889999999999888889999999999999999999888899999999999999999999 78877 8999999999
Q ss_pred cccCCCC-CCchhhhhhccccceeccccccCCCCchhhcccccc--ceeecCCCccc-CCCCCCcCCCcc-ceEEEEecc
Q 039419 110 NSNQLTG-EIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNL--EVIRAGGNKDI-AGKIPYEIGDCQ-SLLVVGLAD 184 (1035)
Q Consensus 110 ~~n~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L--~~L~l~~n~~~-~~~~~~~~~~l~-~L~~L~l~~ 184 (1035)
++|++++ .+|..++.+++|++|++++|.+.+. .+..+++| ++|++++|... .+..|..+..+. ....+++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 9999996 3568999999999999999999853 34445555 88888888621 445555555544 122446666
Q ss_pred ccccccCcc-cccccccccceeecccc-----cccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhccccc
Q 039419 185 TKVAGSLPA-SLGKLSKLQSLSVYTTM-----LSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNN 258 (1035)
Q Consensus 185 ~~~~~~~p~-~l~~l~~L~~L~l~~n~-----l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 258 (1035)
|.+.+..+. .+..+++|+.|++++|. +. ..+..+..+++|+.|+++++.+++. .
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~-~~~~~l~~l~~L~~L~L~~~~l~~~-------------------~ 265 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLM-TFLSELTRGPTLLNVTLQHIETTWK-------------------C 265 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHH-HHHHHHHSCSSCEEEEEEEEEECHH-------------------H
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHH-HHHHHHhccCcceEEEecCCcCcHH-------------------H
Confidence 666554443 34556666666666663 11 1223455556666666665554421 1
Q ss_pred ccccCCccccCCCCCcEEEccCccCCCCCCccc-----cCCCCCcEEEccCCccccCCC-CcccC---CCccceeccccc
Q 039419 259 FDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSF-----GNLSSLEELMLSNNNISGSIP-PVLSN---ATSLLQLQLDTN 329 (1035)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~-~~~~~---l~~L~~L~L~~N 329 (1035)
+.+ ++..+ ..++|++|++++|.+++.+|..+ .+++.|+.++++.|.+ ..| ..+.. ..+|++|++++|
T Consensus 266 ~~~-~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n 341 (562)
T 3a79_B 266 SVK-LFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDT 341 (562)
T ss_dssp HHH-HHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESS
T ss_pred HHH-HHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCC
Confidence 111 11111 23467777777777776666665 5566666666666665 222 22222 246777888777
Q ss_pred hhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCC--CCCCCCCCcceeEe
Q 039419 330 QISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLI--PPEIGNCSSLIRLR 407 (1035)
Q Consensus 330 ~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~ 407 (1035)
++..+ .....+++|++|++++|++++..+..+..+++|++|++++|++++.. |..
T Consensus 342 ~~~~~------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----------- 398 (562)
T 3a79_B 342 PFIHM------------VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALM----------- 398 (562)
T ss_dssp CCCCC------------CCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHT-----------
T ss_pred Ccccc------------cCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhh-----------
Confidence 76521 11267788999999999998878888888888888888888877532 122
Q ss_pred eeccCCCCccceeecCCCccCC-CCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCC
Q 039419 408 LMSFGNCTQLQMLNLSNNTLGG-TLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRC 486 (1035)
Q Consensus 408 ~~~~~~l~~L~~L~L~~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 486 (1035)
|.++++|++|+|++|++++ ..+..+..+++|++|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+
T Consensus 399 ---~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l 472 (562)
T 3a79_B 399 ---TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHL 472 (562)
T ss_dssp ---TTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSS
T ss_pred ---hcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCC
Confidence 3445667777777777776 3334566777777777777777655444433 56777777777776 455555567
Q ss_pred CCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccc
Q 039419 487 ESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLL 553 (1035)
Q Consensus 487 ~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 553 (1035)
++|++|+|++|+|+ .+| +..+..+++|++|+|++|++.++..
T Consensus 473 ~~L~~L~L~~N~l~-~l~------------------------~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 473 QALQELNVASNQLK-SVP------------------------DGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCCSEEECCSSCCC-CCC------------------------TTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCEEECCCCCCC-CCC------------------------HHHHhcCCCCCEEEecCCCcCCCcc
Confidence 77777777777666 232 2236778899999999999998653
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.7e-42 Score=411.12 Aligned_cols=255 Identities=20% Similarity=0.283 Sum_probs=205.7
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.++++|.+.+.||+|+||+||+|.++ +|+.||||++..... ...+.+.+|+.+|+.++|||||++
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~--------------~~~~~~~~Ei~il~~l~hpnIv~l 219 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE--------------SDKETVRKEIQTMSVLRHPTLVNL 219 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--------------HHHHHHHHHHHHHHHTCCTTBCCE
T ss_pred cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch--------------hhHHHHHHHHHHHHhCCCCCCCeE
Confidence 34678999999999999999999776 589999999864321 124678899999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC--Cc
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE--FE 839 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~--~~ 839 (1035)
++++.+++..|+|||||+||+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.
T Consensus 220 ~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~ 295 (573)
T 3uto_A 220 HDAFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNE 295 (573)
T ss_dssp EEEEECSSEEEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCC
T ss_pred EEEEEECCEEEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCC
Confidence 999999999999999999999999986543 3489999999999999999999999 99999999999999854 89
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
+||+|||+|+.+..... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+..
T Consensus 296 vKl~DFG~a~~~~~~~~---~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~~~~~i~~ 370 (573)
T 3uto_A 296 LKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNVKS 370 (573)
T ss_dssp EEECCCSSCEECCTTSE---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHT
T ss_pred EEEeeccceeEccCCCc---eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHh
Confidence 99999999998755432 2356899999999999999999999999999999999999999975422 122222211
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
... .+........+ ....+++.+||+.||++||++.|++++
T Consensus 371 ~~~---~~~~~~~~~~s------~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 371 CDW---NMDDSAFSGIS------EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TCC---CCCSGGGTTSC------HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCC---CCCcccccCCC------HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 110 00111111111 123467888999999999999999884
No 44
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.5e-41 Score=375.10 Aligned_cols=255 Identities=26% Similarity=0.337 Sum_probs=205.0
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|.+.+.||+|+||+||+|.+. +++.||||++....... ..+.+.+|+.+++.++||||+++++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~hpnIv~~~~ 72 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-------------CPENIKKEICINKMLNHENVVKFYG 72 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------------CHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc-------------hHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 467999999999999999999776 68999999986433221 1356889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||++||+|.+++..... +++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 73 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~ 147 (323)
T 3tki_A 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147 (323)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGSBTTTB--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEecCCeEEEEEEcCCCCcHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEE
Confidence 99999999999999999999999976543 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|||+++.+.............||+.|+|||++.+..+ +.++|||||||++|||++|+.||............|......
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~ 227 (323)
T 3tki_A 148 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY 227 (323)
T ss_dssp CCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT
T ss_pred EeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc
Confidence 9999987654443333456789999999999877765 778999999999999999999998655443333333221110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..+.... .....+++.+||+.||++|||++|++++
T Consensus 228 ----------~~~~~~~--~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 ----------LNPWKKI--DSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ----------STTGGGS--CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----------CCccccC--CHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0000111 1123457888999999999999999874
No 45
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.1e-40 Score=372.46 Aligned_cols=275 Identities=35% Similarity=0.601 Sum_probs=222.0
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
....++|...+.||+|+||.||+|.+.+++.||||++..... ...+.+.+|+.++++++||||+++
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv~~ 100 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS--------------QGIEEFETEIETLSFCRHPHLVSL 100 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS--------------SHHHHHHHHHHGGGSCCCTTBCCE
T ss_pred HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh--------------HHHHHHHHHHHHHHhCCCCCEeeE
Confidence 344578999999999999999999988899999999865321 125679999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCC--CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRD--SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE 839 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~ 839 (1035)
++++.+.+..|+||||+++|+|.+++..... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 101 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 101 IGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177 (321)
T ss_dssp EEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCC
T ss_pred EEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCC
Confidence 9999999999999999999999999976542 3489999999999999999999999 9999999999999999999
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC-chhHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPE-GLHIVDWVR 918 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~-~~~~~~~~~ 918 (1035)
+||+|||+++...............||+.|+|||+..+..++.++||||||+++|||++|+.||....+. ......|..
T Consensus 178 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 257 (321)
T 2qkw_B 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257 (321)
T ss_dssp EEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred EEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence 9999999998754433333334566999999999998889999999999999999999999999865443 233444433
Q ss_pred Hhccc---hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 919 QKRGA---IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 919 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
..... ...+++...... .......+.+++.+||+.||++||++.|++++|+.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 258 ESHNNGQLEQIVDPNLADKI--RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp HHHTTTCCCSSSSSSCTTCS--CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccccccHHHhcChhhcccc--CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 22111 122222222222 22444556678999999999999999999999998754
No 46
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.2e-40 Score=378.87 Aligned_cols=262 Identities=26% Similarity=0.392 Sum_probs=211.5
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC--------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CC
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME--------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RH 755 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 755 (1035)
.++|...+.||+|+||.||+|++. ++..||||++...... ...+.+.+|+++++++ +|
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~~h 146 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-------------KDLSDLVSEMEMMKMIGKH 146 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBH-------------HHHHHHHHHHHHHHHSCCC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCH-------------HHHHHHHHHHHHHHHhcCC
Confidence 367889999999999999999762 3567999999654221 1246799999999999 89
Q ss_pred CceeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhccCCCC
Q 039419 756 KNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD--------------SCLEWELRYRIILGAAQGLAYLHHDCVPP 821 (1035)
Q Consensus 756 pniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 821 (1035)
|||+++++++.+.+..|+||||+++|+|.+++...+. ..+++..+..++.||++||+|||+. +
T Consensus 147 pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ 223 (370)
T 2psq_A 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---K 223 (370)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred CCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 9999999999999999999999999999999986542 3478999999999999999999999 9
Q ss_pred eeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 039419 822 IVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GK 900 (1035)
Q Consensus 822 ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~ 900 (1035)
|+||||||+|||++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+
T Consensus 224 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~ 303 (370)
T 2psq_A 224 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 303 (370)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred eeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999987655443333445678899999999999999999999999999999999 99
Q ss_pred CCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 901 QPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 901 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
.||...... .....+.... ........+ ..+..++.+||+.||++||++.|+++.|+.+...
T Consensus 304 ~p~~~~~~~--~~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 304 SPYPGIPVE--ELFKLLKEGH------RMDKPANCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp CSSTTCCGG--GHHHHHHTTC------CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHH--HHHHHHhcCC------CCCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 999754322 2222222111 000111111 1234578889999999999999999999998653
No 47
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=378.14 Aligned_cols=254 Identities=22% Similarity=0.312 Sum_probs=197.3
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
+++.++|...+.||+|+||+||+|++. +|+.||||++........ .+.+.+|++++++++||||++
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~-------------~~~~~~Ei~~l~~l~hpnIv~ 72 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD-------------LPRIKTEIEALKNLRHQHICQ 72 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----------------CCHHHHHHHHHHTCCCTTBCC
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchH-------------HHHHHHHHHHHHhCCCCCEee
Confidence 345678999999999999999999764 689999999965443221 346889999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++.+.+..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 73 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~ 147 (347)
T 3zgw_A 73 LYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKL 147 (347)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred EEEEEEeCCEEEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCE
Confidence 99999999999999999999999999977654 89999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|||++........ ......+||+.|+|||++.+..+ +.++||||+||++|||++|..||..... ......+..
T Consensus 148 kL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--~~~~~~i~~ 224 (347)
T 3zgw_A 148 KLIDFGLCAKPKGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--MALYKKIMR 224 (347)
T ss_dssp EECCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH
T ss_pred EEEeccCcccccCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHc
Confidence 9999999886544322 22345679999999999887775 8899999999999999999999975321 111111111
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. .......+ .....++.+||+.||++|||++|++++
T Consensus 225 ~~-------~~~p~~~s------~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 225 GK-------YDVPKWLS------PSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp TC-------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CC-------CCCCCCCC------HHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 10 00111111 123457888999999999999999985
No 48
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.4e-41 Score=373.32 Aligned_cols=250 Identities=22% Similarity=0.292 Sum_probs=203.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEE-CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM-ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|++ .+|+.||||++....... ...+++.+|+.+++.++||||+++++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~l~~ 81 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP------------TSLQKLFREVRIMKILNHPNIVKLFE 81 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH------------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH------------HHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 35799999999999999999987 469999999996533221 12467889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||++||+|.+++...+. +++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 82 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~ 156 (328)
T 3fe3_A 82 VIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIA 156 (328)
T ss_dssp EEECSSEEEEEECCCTTCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred EEEECCEEEEEEECCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEe
Confidence 99999999999999999999999977654 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCC-ccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKIT-EKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|||+++...... .....+||+.|+|||++.+..+. .++||||+||++|||++|+.||...... .....+....
T Consensus 157 DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~- 230 (328)
T 3fe3_A 157 DFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELRERVLRGK- 230 (328)
T ss_dssp STTCCGGGSSSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC-
T ss_pred eccCceecCCCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC-
Confidence 999998765432 23456899999999998887765 7999999999999999999999754211 1111111100
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.......+ ....+++.+||..||++|||++|++++
T Consensus 231 ------~~~p~~~s------~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 ------YRIPFYMS------TDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ------CCCCTTSC------HHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ------CCCCCCCC------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00111111 223457888999999999999999874
No 49
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.4e-40 Score=385.62 Aligned_cols=422 Identities=26% Similarity=0.272 Sum_probs=240.0
Q ss_pred CCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccce
Q 039419 52 SLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNL 131 (1035)
Q Consensus 52 ~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 131 (1035)
..++|++|++++|.+ |.+|++++.+++|++|++++|++.|.+|..++.+++|+++++..|.. .+|++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 457888899998888 58888888899999999988888888888888888887777766542 467778
Q ss_pred eccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeeccccc
Q 039419 132 LLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTML 211 (1035)
Q Consensus 132 ~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l 211 (1035)
++++|.++ .+|.. .++|++|++++|. +. .+|.. +++|+.|++++|.+.+ +|.. .++|++|++++|.+
T Consensus 77 ~l~~~~l~-~lp~~---~~~L~~L~l~~n~-l~-~lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 77 ELNNLGLS-SLPEL---PPHLESLVASCNS-LT-ELPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQL 143 (454)
T ss_dssp ECTTSCCS-CCCSC---CTTCSEEECCSSC-CS-SCCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCC
T ss_pred EecCCccc-cCCCC---cCCCCEEEccCCc-CC-ccccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCC
Confidence 88888877 34442 3577777777775 22 25532 3677777787777764 2221 16788888888888
Q ss_pred ccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccc
Q 039419 212 SGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSF 291 (1035)
Q Consensus 212 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~ 291 (1035)
++ +| .++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+.++++|+.|++++|++++ +|...
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~ 214 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP 214 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc
Confidence 74 66 58888888888888888874 55433 477788888888875 55 57788888888888888874 34322
Q ss_pred cCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCC
Q 039419 292 GNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHP 371 (1035)
Q Consensus 292 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~ 371 (1035)
++|++|++++|++. .+| .|..+++|++|++++|+++. +|.. +++|+.|++++|++++ +|.
T Consensus 215 ---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-----------l~~~---~~~L~~L~l~~N~l~~-l~~ 274 (454)
T 1jl5_A 215 ---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-----------LPDL---PPSLEALNVRDNYLTD-LPE 274 (454)
T ss_dssp ---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-----------CCSC---CTTCCEEECCSSCCSC-CCC
T ss_pred ---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-----------cccc---ccccCEEECCCCcccc-cCc
Confidence 57888888888887 445 37778888888888877763 2322 3677888888888875 343
Q ss_pred CcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCC-CCccEEEcCCCc
Q 039419 372 GLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASL-TRLQVLDISVNQ 450 (1035)
Q Consensus 372 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l-~~L~~L~Ls~N~ 450 (1035)
. .++|++|++++|++++... + .++|++|++++|++++. + .+ ++|++|++++|+
T Consensus 275 ~---~~~L~~L~ls~N~l~~l~~--~----------------~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~ 328 (454)
T 1jl5_A 275 L---PQSLTFLDVSENIFSGLSE--L----------------PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNK 328 (454)
T ss_dssp C---CTTCCEEECCSSCCSEESC--C----------------CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSC
T ss_pred c---cCcCCEEECcCCccCcccC--c----------------CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCc
Confidence 2 3677888888887775311 0 14577788888877742 2 23 477888888888
Q ss_pred cCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcC--ccchhhhhhccCcceeeccCccCCCCC
Q 039419 451 FVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSG--KIPVELFEIEGLDISLNLSWNALSGAI 528 (1035)
Q Consensus 451 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~~~~l~~~L~Ls~N~l~~~~ 528 (1035)
++++ |.. +++|+.|++++|+++ .+|. .+++|++|+|++|++++ .+|..+. +|+.|.+.+.+
T Consensus 329 l~~l-p~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~---------~L~~n~~~~~i 391 (454)
T 1jl5_A 329 LIEL-PAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVE---------DLRMNSHLAEV 391 (454)
T ss_dssp CSCC-CCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCC---------EEECCC-----
T ss_pred cccc-ccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHH---------hhhhccccccc
Confidence 7763 332 467777888888777 3454 36777888888888775 4554432 23445555555
Q ss_pred CccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcccCC
Q 039419 529 PPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGYLP 576 (1035)
Q Consensus 529 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p 576 (1035)
|.. +++|++|||++|++++.+..- ++|+.|.+.+|.+.+..+
T Consensus 392 ~~~---~~~L~~L~ls~N~l~~~~~iP---~sl~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 392 PEL---PQNLKQLHVETNPLREFPDIP---ESVEDLRMNSERVVDPYE 433 (454)
T ss_dssp ------------------------------------------------
T ss_pred ccc---cCcCCEEECCCCcCCccccch---hhHhheeCcCcccCCccc
Confidence 542 355666666666665422110 234455555555554433
No 50
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.6e-40 Score=364.52 Aligned_cols=252 Identities=21% Similarity=0.338 Sum_probs=203.4
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
..++|...+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|+.++++++||||++++
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~E~~~l~~l~hp~iv~~~ 83 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--------------PKKELIINEILVMRENKNPNIVNYL 83 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--------------SCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--------------cHHHHHHHHHHHHhcCCCCCCCeEe
Confidence 3468999999999999999999764 689999999854321 1246789999999999999999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+.+..|+||||++||+|.+++.... +++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl 157 (297)
T 3fxz_A 84 DSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKL 157 (297)
T ss_dssp EEEEETTEEEEEEECCTTCBHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEE
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEE
Confidence 99999999999999999999999997653 89999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
+|||++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||....+.. ....+.....
T Consensus 158 ~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~ 233 (297)
T 3fxz_A 158 TDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYLIATNGT 233 (297)
T ss_dssp CCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHHCS
T ss_pred eeCCCceecCCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCC
Confidence 99999987654332 2345689999999999999999999999999999999999999997543211 1111111000
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
... ..+.... ....+++.+||+.||++|||++|++++
T Consensus 234 ------~~~--~~~~~~~--~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 234 ------PEL--QNPEKLS--AIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ------CCC--SCGGGSC--HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------CCC--CCccccC--HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 000 0011111 123457888999999999999999874
No 51
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.9e-40 Score=389.87 Aligned_cols=382 Identities=21% Similarity=0.197 Sum_probs=279.3
Q ss_pred CceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCC-chhhccccccceeecC
Q 039419 80 LTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNL-PVELGKLVNLEVIRAG 158 (1035)
Q Consensus 80 L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~-p~~l~~l~~L~~L~l~ 158 (1035)
-+.++.++++++ .+|. + .++|++|+|++|.+++..|..++.+++|++|+|++|.+.+.+ +..|..+++|++|+++
T Consensus 12 ~~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 456888888888 7776 3 268999999999998767888888999999999998887555 4567888888888888
Q ss_pred CCcccCCCCCCcCCCccceEEEEeccccccccCccc--ccccccccceeecccccccCCccc-cccCcCCceEEecCCcC
Q 039419 159 GNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPAS--LGKLSKLQSLSVYTTMLSGEIPPQ-IGNCSELVDLFLYENDL 235 (1035)
Q Consensus 159 ~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~--l~~l~~L~~L~l~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l 235 (1035)
+|. +.+..|..++.+++|++|++++|.+++..|.. |+.+++|++|++++|.+++..|.. +.++++|++|++++|.+
T Consensus 88 ~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l 166 (455)
T 3v47_A 88 YNQ-FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV 166 (455)
T ss_dssp TCT-TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCB
T ss_pred CCc-cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcc
Confidence 875 44455666777777777777777776644444 667777777777777776555554 66677777777777777
Q ss_pred CCCCChhhhcc--cchhHhhcccccccccCCcc--------ccCCCCCcEEEccCccCCCCCCccccCC---CCCcEEEc
Q 039419 236 SGSLPRELGKL--QKLEKMLLWQNNFDGAIPEE--------IGNCKSLKTIDLSLNFFSGSLPQSFGNL---SSLEELML 302 (1035)
Q Consensus 236 ~~~~~~~l~~l--~~L~~L~l~~n~l~~~~p~~--------~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L 302 (1035)
++..+..+..+ .+|+.|++++|.+.+..+.. +..+++|+.|+|++|++++..|..+..+ ++|+.|++
T Consensus 167 ~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l 246 (455)
T 3v47_A 167 KSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL 246 (455)
T ss_dssp SCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEEC
T ss_pred cccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEee
Confidence 76666666655 56666666666666443332 2244556666666666655555444333 55666666
Q ss_pred cCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCC--CCCCcEEeccCcCCCCCCCCCcccCcccc
Q 039419 303 SNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLAN--CRSLEAVDLSHNALTGSLHPGLFQLQNLT 380 (1035)
Q Consensus 303 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 380 (1035)
++|.+.+.. ...+.+.+..+..+.. .++|+.|++++|.+++..+..+..+++|+
T Consensus 247 ~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 302 (455)
T 3v47_A 247 SNSYNMGSS------------------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLE 302 (455)
T ss_dssp TTCTTTSCC------------------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred ccccccccc------------------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCC
Confidence 665544221 1111122222233333 36899999999999988888899999999
Q ss_pred eEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhcc
Q 039419 381 KLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFG 460 (1035)
Q Consensus 381 ~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 460 (1035)
+|+|++|++++..|..|.. +++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.
T Consensus 303 ~L~Ls~n~l~~~~~~~~~~--------------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 368 (455)
T 3v47_A 303 QLTLAQNEINKIDDNAFWG--------------LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL 368 (455)
T ss_dssp EEECTTSCCCEECTTTTTT--------------CTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred EEECCCCcccccChhHhcC--------------cccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcc
Confidence 9999999998877766554 46699999999999988888999999999999999999988889999
Q ss_pred CccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccc
Q 039419 461 QLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIP 504 (1035)
Q Consensus 461 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 504 (1035)
.+++|++|+|++|+|++..+..|..+++|++|+|++|++++..|
T Consensus 369 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 369 GLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999999999999997777778899999999999999997776
No 52
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.3e-40 Score=370.79 Aligned_cols=273 Identities=39% Similarity=0.691 Sum_probs=218.9
Q ss_pred HHhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
..++|...+.||+|+||.||+|++.+++.||||++........ ...+.+|+.++++++||||+++++
T Consensus 28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-------------~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 28 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG-------------ELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp TTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C-------------CCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred HhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH-------------HHHHHHHHHHHHhccCCCccceEE
Confidence 3488999999999999999999988899999999975432221 236899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCC--CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRD--SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++.+.+..++||||+++|+|.++++.... ..+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999999986543 3489999999999999999999998666899999999999999999999
Q ss_pred EeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCC---CCCchhHHHHHH
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPT---IPEGLHIVDWVR 918 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~---~~~~~~~~~~~~ 918 (1035)
|+|||+++....... .......||+.|+|||+..+..++.++||||||+++|||++|+.||+.. .........|+.
T Consensus 175 l~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 999999987654332 2234566999999999998888999999999999999999999999621 122334445544
Q ss_pred Hhccc---hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 039419 919 QKRGA---IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKE 972 (1035)
Q Consensus 919 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~ 972 (1035)
..... ....+...... ........+.+++.+||+.||++|||++|++++|+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGN--YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTS--CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhccc--cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 32211 11222222222 223455567778999999999999999999999975
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.2e-40 Score=372.01 Aligned_cols=272 Identities=26% Similarity=0.340 Sum_probs=207.2
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|+..+.||+|+||+||+|++. ++.||||++..... ....+.+|+.++++++||||+++++++
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~hpniv~~~~~~ 87 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK---------------QSWQNEYEVYSLPGMKHENILQFIGAE 87 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH---------------HHHHHHHHHHTSTTCCCTTBCCEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch---------------HHHHHHHHHHHHhcCCCCCchhhccee
Confidence 57889999999999999999887 79999999854211 134566799999999999999999999
Q ss_pred EcCCc----ceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccC-------CCCeeccCCCcccEEE
Q 039419 766 WNRNT----RLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDC-------VPPIVHRDIKANNILI 834 (1035)
Q Consensus 766 ~~~~~----~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------~~~ivHrDikp~NIll 834 (1035)
.+... .|+||||+++|+|.++++... +++..+..++.|+++||+|||+.. .++|+||||||+||++
T Consensus 88 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill 164 (322)
T 3soc_A 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL 164 (322)
T ss_dssp EEECSSSEEEEEEEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE
T ss_pred ccCCCCCceEEEEEecCCCCCHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE
Confidence 87553 599999999999999997643 899999999999999999999851 2279999999999999
Q ss_pred cCCCceEEeeccCccccccCCccccccccCCcccccCCccccc-----CCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 039419 835 GPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-----MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPE 909 (1035)
Q Consensus 835 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~ 909 (1035)
+.++.+||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 165 ~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~ 244 (322)
T 3soc_A 165 KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244 (322)
T ss_dssp CTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCC
T ss_pred CCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcch
Confidence 9999999999999987765544333445689999999999876 34567889999999999999999999765332
Q ss_pred chh-HHHHHHHhccchh----hhcccccCCCc---ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 910 GLH-IVDWVRQKRGAIE----VLDKSLRARPE---VEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 910 ~~~-~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
... ............. ........... ........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 245 YMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111 1110000000000 00111111110 1112333456789999999999999999999999998754
No 54
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=362.68 Aligned_cols=263 Identities=25% Similarity=0.456 Sum_probs=209.3
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||+||+|.+. +++.||+|++..... ...+.|.+|++++++++||||++++++
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~--------------~~~~~~~~E~~~l~~l~hp~iv~~~~~ 75 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDE--------------ETQRTFLKEVKVMRCLEHPNVLKFIGV 75 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCH--------------HHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCH--------------HHHHHHHHHHHHHHhCCCcCcccEEEE
Confidence 57888999999999999999876 589999999854211 235689999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+++..++||||+++|+|.++++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 151 (310)
T 3s95_A 76 LYKDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVAD 151 (310)
T ss_dssp EEETTEEEEEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECC
T ss_pred EecCCeeEEEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEee
Confidence 999999999999999999999998743 3489999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccc------------cccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchh
Q 039419 845 FGLAKLVVEGDFAR------------SSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLH 912 (1035)
Q Consensus 845 FG~a~~~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~ 912 (1035)
||+++......... ......||+.|+|||++.+..++.++||||||+++|||++|..||....+....
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp CTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred cccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 99998764432211 112467999999999999999999999999999999999999998754332211
Q ss_pred HHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 913 IVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
.... .............+.. +..++.+||+.||++||++.++++.|+.+.....
T Consensus 232 ~~~~------~~~~~~~~~~~~~~~~------l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 232 FGLN------VRGFLDRYCPPNCPPS------FFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp SSBC------HHHHHHHTCCTTCCTT------HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred Hhhh------hhccccccCCCCCCHH------HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0000 0011111112222222 3447778999999999999999999999876543
No 55
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.9e-40 Score=384.97 Aligned_cols=403 Identities=26% Similarity=0.305 Sum_probs=179.8
Q ss_pred CcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCC-------------ceeeCCCCCCCCCCCh
Q 039419 30 NFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQL-------------TTIDVSSNSLVGGVPS 96 (1035)
Q Consensus 30 ~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L-------------~~L~ls~n~l~~~~p~ 96 (1035)
..++.++++++++ +.+|..+++|++|++|++++|.++|.+|.+++.+.+| ++|++++|+++ .+|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCCC
Confidence 4578899999999 8999999999999999999999999999999999987 55666666555 3333
Q ss_pred hhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccc
Q 039419 97 SIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQS 176 (1035)
Q Consensus 97 ~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 176 (1035)
. .++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|++
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L------------------- 138 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGV------------------- 138 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEEC-------------------
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEEC-------------------
Confidence 1 2455566666665553 4432 2455555555555542 2211 134444544
Q ss_pred eEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhccc
Q 039419 177 LLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQ 256 (1035)
Q Consensus 177 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~ 256 (1035)
++|.+.+ +| .|+++++|++|++++|++++ +|..+ .+|++|++++|.+++ +| .++.+++|++|++++
T Consensus 139 ------~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 139 ------SNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp ------CSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred ------cCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 4444443 33 35555555555555555552 33322 255555555555553 33 355555555555555
Q ss_pred ccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhh
Q 039419 257 NNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFA 336 (1035)
Q Consensus 257 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~ 336 (1035)
|++.+ +|... ++|++|++++|+++ .+| .|+.+++|++|++++|++++ +|.. +++|++|++++|+++.
T Consensus 205 N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~--- 271 (454)
T 1jl5_A 205 NSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD--- 271 (454)
T ss_dssp SCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC---
T ss_pred CcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc---
Confidence 55553 33221 35566666666555 344 25555666666666665553 2221 2455566666555542
Q ss_pred hccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCc
Q 039419 337 WQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQ 416 (1035)
Q Consensus 337 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~ 416 (1035)
+|.. .++|++|++++|++++. +.. .++|++|++++|++++.. . + .++
T Consensus 272 --------l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~-~----~-------------~~~ 318 (454)
T 1jl5_A 272 --------LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLC-D----L-------------PPS 318 (454)
T ss_dssp --------CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEEC-C----C-------------CTT
T ss_pred --------cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCccc-C----C-------------cCc
Confidence 2221 24566666666666531 110 145666666666655321 0 0 024
Q ss_pred cceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccc--cCccccCCCCCCcEEEc
Q 039419 417 LQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSG--AIPSSLGRCESLQSLDL 494 (1035)
Q Consensus 417 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L 494 (1035)
|++|++++|++++ +|.. +++|++|++++|+++++ |. .+++|++|++++|++++ .+|..+..+
T Consensus 319 L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~l-p~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L-------- 382 (454)
T 1jl5_A 319 LEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEV-PE---LPQNLKQLHVEYNPLREFPDIPESVEDL-------- 382 (454)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------
T ss_pred CCEEECCCCcccc-cccc---CCcCCEEECCCCccccc-cc---hhhhccEEECCCCCCCcCCCChHHHHhh--------
Confidence 6666666666664 3332 35566666666666643 22 24566666666666665 344433321
Q ss_pred CCCcCcCccchhhhhhccCcceeeccCccCCC--CCCccccCCccccEEeccCCcccC
Q 039419 495 SSNKLSGKIPVELFEIEGLDISLNLSWNALSG--AIPPQISALNKLSILDLSHNKLGG 550 (1035)
Q Consensus 495 s~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~ 550 (1035)
+.|.+.|.+|... ..+..|++++|.+++ .+| ..|+.|.+.+|.+.+
T Consensus 383 ~~n~~~~~i~~~~----~~L~~L~ls~N~l~~~~~iP------~sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 383 RMNSHLAEVPELP----QNLKQLHVETNPLREFPDIP------ESVEDLRMNSERVVD 430 (454)
T ss_dssp ECCC------------------------------------------------------
T ss_pred hhccccccccccc----CcCCEEECCCCcCCccccch------hhHhheeCcCcccCC
Confidence 2344444444321 112245555555554 233 234555666666554
No 56
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-40 Score=366.90 Aligned_cols=261 Identities=30% Similarity=0.432 Sum_probs=200.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
.++|.+.+.||+|+||+||+|++. ++.||||++....... ...+.+.+|+.++++++||||++++++
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hp~iv~~~~~ 102 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHA------------ERVNEFLREVAIMKRLRHPNIVLFMGA 102 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSH------------HHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCH------------HHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 467899999999999999999874 8899999986543222 124678999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHhhccCCCC--eeccCCCcccEEEcCCCceE
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRD-SCLEWELRYRIILGAAQGLAYLHHDCVPP--IVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivHrDikp~NIll~~~~~~k 841 (1035)
+.+.+..++||||+++|+|.+++..... ..+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+|
T Consensus 103 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~k 179 (309)
T 3p86_A 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVK 179 (309)
T ss_dssp ECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEE
T ss_pred EEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEE
Confidence 9999999999999999999999976432 2388999999999999999999999 7 99999999999999999999
Q ss_pred EeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhc
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKR 921 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 921 (1035)
|+|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....+. .....+....
T Consensus 180 L~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~~~~ 255 (309)
T 3p86_A 180 VCDFGLSRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVGFKC 255 (309)
T ss_dssp ECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHHHSC
T ss_pred ECCCCCCccccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcC
Confidence 99999998654332 2233567999999999999999999999999999999999999999754321 1111111111
Q ss_pred cchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 922 GAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
. ........+ ..+.+++.+||+.||++||+++++++.|+.+.+.
T Consensus 256 ~-----~~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 256 K-----RLEIPRNLN------PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp C-----CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred C-----CCCCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0 001111111 1234578889999999999999999999888643
No 57
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.3e-40 Score=368.06 Aligned_cols=252 Identities=21% Similarity=0.242 Sum_probs=203.9
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|+.+ +|+.||+|++........ ...+.+.+|+.+++.++||||+++++
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hp~iv~l~~ 72 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-----------DEVAHTVTESRVLQNTRHPFLTALKY 72 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhh-----------hHHHHHHHHHHHHHhCCCCcCcceEE
Confidence 367899999999999999999876 589999999964322111 23567899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||++||+|.+++...+. +++..+..++.||+.||+|||++ ||+||||||+||+++.+|.+||+
T Consensus 73 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~ 147 (337)
T 1o6l_A 73 AFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKIT 147 (337)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEe
Confidence 99999999999999999999999987654 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...
T Consensus 148 DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~--- 220 (337)
T 1o6l_A 148 DFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILME--- 220 (337)
T ss_dssp CCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC---
T ss_pred eccchhhcccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHHHHcC---
Confidence 999998643322 223456899999999999999999999999999999999999999975321 1111111110
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRP-----TMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RP-----s~~el~~~ 969 (1035)
........+ ..+..++.+||++||++|| +++|++++
T Consensus 221 ----~~~~p~~~s------~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 221 ----EIRFPRTLS------PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ----CCCCCTTSC------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----CCCCCCCCC------HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 001111111 1234577889999999999 89999875
No 58
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.7e-40 Score=378.90 Aligned_cols=260 Identities=23% Similarity=0.377 Sum_probs=208.0
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||.||+|.+. +++.||||++....... ..+.|.+|++++++++||||++++++
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~hpniv~~~~~ 180 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-------------LKAKFLQEARILKQYSHPNIVRLIGV 180 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHH-------------HHTTTTHHHHHHTTCCCTTBCCEEEE
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHH-------------HHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 57888999999999999999886 68999999986532211 23468899999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+++..|+||||+++|+|.++++..+ ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 181 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~D 256 (377)
T 3cbl_A 181 CTQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISD 256 (377)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred EecCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECc
Confidence 999999999999999999999997653 2389999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+...
T Consensus 257 fG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~~~~~~~~~--- 331 (377)
T 3cbl_A 257 FGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQTREFVEKG--- 331 (377)
T ss_dssp GGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HHHHHHHHTT---
T ss_pred CCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcC---
Confidence 999986544332222223346788999999988889999999999999999998 9999975422 1222222111
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
.+...+.... ..+.+++.+||+.||++|||++++++.|+++.+.
T Consensus 332 -------~~~~~~~~~~--~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 332 -------GRLPCPELCP--DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp -------CCCCCCTTCC--HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCCCC--HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 0111111111 1234578889999999999999999999998653
No 59
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=367.89 Aligned_cols=262 Identities=23% Similarity=0.357 Sum_probs=206.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC----CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME----NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
.++|.+.+.||+|+||+||+|.+. .+..||||++....... ..+.|.+|+.++++++||||++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~~iv~ 114 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER-------------QRRDFLSEASIMGQFDHPNIIR 114 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHH-------------HHHHHHHHHHHHTTCCCTTBCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHH-------------HHHHHHHHHHHHHhCCCCCCCc
Confidence 367889999999999999999875 35569999996543221 2567999999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++.+.+..|+||||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 115 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (325)
T 3kul_A 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVC 190 (325)
T ss_dssp EEEEECGGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEEEeCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCE
Confidence 9999999999999999999999999997543 3489999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCc-cccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHH
Q 039419 841 YIADFGLAKLVVEGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~ 918 (1035)
||+|||+++....... ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.
T Consensus 191 kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~ 268 (325)
T 3kul_A 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSVE 268 (325)
T ss_dssp EECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHHHHH
T ss_pred EECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHH
Confidence 9999999987654322 112233456889999999988899999999999999999999 9999965422 11111111
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
... ........+ ..+..++.+||+.||++||++.++++.|+.+....
T Consensus 269 ~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 269 EGY------RLPAPMGCP------HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp TTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred cCC------CCCCCCCcC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 110 000111111 23345788899999999999999999999986543
No 60
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=375.45 Aligned_cols=265 Identities=25% Similarity=0.361 Sum_probs=211.4
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCce
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNI 758 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni 758 (1035)
.++|...+.||+|+||+||+|++. +++.||||++....... ...++.+|+.++++++||||
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~hpnI 136 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ-------------DELDFLMEALIISKFNHQNI 136 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHH-------------HHHHHHHHHHHHHHCCCTTB
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChh-------------hHHHHHHHHHHHHhCCCCCC
Confidence 367889999999999999999853 46789999986432221 24578899999999999999
Q ss_pred eeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC-----CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEE
Q 039419 759 VRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD-----SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNIL 833 (1035)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIl 833 (1035)
+++++++.+.+..|+||||+++|+|.+++...+. ..+++..++.++.||++||+|||++ +|+||||||+|||
T Consensus 137 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 213 (367)
T 3l9p_A 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 213 (367)
T ss_dssp CCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEE
Confidence 9999999999999999999999999999987543 3489999999999999999999999 9999999999999
Q ss_pred EcCCC---ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCC
Q 039419 834 IGPEF---EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPE 909 (1035)
Q Consensus 834 l~~~~---~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~ 909 (1035)
++.++ .+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 214 l~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~- 292 (367)
T 3l9p_A 214 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN- 292 (367)
T ss_dssp ESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-
T ss_pred EecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 99555 599999999986654433334445678999999999988899999999999999999998 9999975422
Q ss_pred chhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHH
Q 039419 910 GLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREE 979 (1035)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 979 (1035)
......+.... ....+.... ..+..++.+||+.||++||++.+++++|+.+......
T Consensus 293 -~~~~~~i~~~~----------~~~~~~~~~--~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~ 349 (367)
T 3l9p_A 293 -QEVLEFVTSGG----------RMDPPKNCP--GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349 (367)
T ss_dssp -HHHHHHHHTTC----------CCCCCTTCC--HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred -HHHHHHHHcCC----------CCCCCccCC--HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhh
Confidence 12222221111 001111111 1234578889999999999999999999998766554
No 61
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-39 Score=358.56 Aligned_cols=262 Identities=23% Similarity=0.331 Sum_probs=203.0
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|.+.+.||+|+||.||+|++. +++.||+|++........ ...+.+.+|+.++++++||||++++++
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~hp~iv~~~~~ 79 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE-----------ETLKRFEREVHNSSQLSHQNIVSMIDV 79 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCH-----------HHHHHHHHHHHHHTTCCBTTBCCEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccH-----------HHHHHHHHHHHHHhcCCCCCCceEEEe
Confidence 57899999999999999999765 589999999865432222 235689999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||++|++|.+++...+. +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~D 154 (294)
T 4eqm_A 80 DEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFD 154 (294)
T ss_dssp EECSSEEEEEEECCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred eeeCCeEEEEEeCCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEe
Confidence 9999999999999999999999987654 89999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccch
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
||+++....... .......||+.|+|||+..+..++.++||||+|+++|||++|+.||....... ..........
T Consensus 155 fg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~----~~~~~~~~~~ 229 (294)
T 4eqm_A 155 FGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS----IAIKHIQDSV 229 (294)
T ss_dssp CSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH----HHHHHHSSCC
T ss_pred CCCccccccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHhhccC
Confidence 999987644322 22335679999999999999999999999999999999999999997542211 1111111111
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHHH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRP-TMKDVAAMIKEIK 974 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RP-s~~el~~~L~~~~ 974 (1035)
...........+. .+..++.+||++||++|| +++++.+.|+.+.
T Consensus 230 ~~~~~~~~~~~~~------~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 230 PNVTTDVRKDIPQ------SLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp CCHHHHSCTTSCH------HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred CCcchhcccCCCH------HHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 1111111111221 234577889999999998 8888888887653
No 62
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.7e-40 Score=356.25 Aligned_cols=256 Identities=24% Similarity=0.436 Sum_probs=208.9
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||+||+|.+.+++.||+|++..... ..+++.+|++++++++||||+++++++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~h~~i~~~~~~~ 74 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------------SEEDFIEEAEVMMKLSHPKLVQLYGVC 74 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---------------CHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---------------CHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 56888999999999999999998899999999965322 245789999999999999999999999
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
.+++..|+||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 75 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 150 (269)
T 4hcu_A 75 LEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDF 150 (269)
T ss_dssp CSSSSEEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCT
T ss_pred ecCCceEEEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccc
Confidence 99999999999999999999997644 3489999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccch
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
|+++....... .......||+.|+|||+..+..++.++||||+|+++|||++ |+.||...... .....+...
T Consensus 151 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~---- 223 (269)
T 4hcu_A 151 GMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTG---- 223 (269)
T ss_dssp TGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTT----
T ss_pred ccccccccccc-ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcC----
Confidence 99987644322 22334567889999999988899999999999999999999 99999754221 111111110
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
.........+ ....+++.+||++||++||+++|++++|+++..
T Consensus 224 --~~~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 224 --FRLYKPRLAS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp --CCCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --ccCCCCCcCC------HHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 0001111111 223457888999999999999999999998864
No 63
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.7e-39 Score=365.03 Aligned_cols=259 Identities=21% Similarity=0.273 Sum_probs=206.0
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
+.+.|.+.+.||+|+||+||+|.++ +|+.||+|++......... .....+.+.+|+.++++++||||++++
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~--------~~~~~~~~~~E~~il~~l~hpnIv~l~ 81 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--------RGVCREEIEREVSILRQVLHPNIITLH 81 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCS--------SSBCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccccc--------chhHHHHHHHHHHHHHhCCCcCCCcEE
Confidence 4567999999999999999999876 5899999999764432211 012357899999999999999999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC----
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF---- 838 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~---- 838 (1035)
+++.+.+..|+||||++||+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 82 DVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred EEEEeCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCcc
Confidence 99999999999999999999999997654 489999999999999999999999 999999999999998877
Q ss_pred ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+.
T Consensus 157 ~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~~~~~~i~ 231 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANIT 231 (361)
T ss_dssp CEEECCCSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHH
T ss_pred CEEEEecCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH
Confidence 79999999998765432 22356799999999999988999999999999999999999999975421 11111111
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
... ...........+ ..+.+++.+||.+||++|||+.|++++
T Consensus 232 ~~~---~~~~~~~~~~~s------~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 232 AVS---YDFDEEFFSQTS------ELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp TTC---CCCCHHHHTTSC------HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hcC---CCCCchhccCCC------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 110 000111111111 123457888999999999999999873
No 64
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1e-38 Score=354.20 Aligned_cols=276 Identities=32% Similarity=0.542 Sum_probs=213.6
Q ss_pred HHHHHhccccC------CeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC
Q 039419 681 VEQVLKCLVED------SVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR 754 (1035)
Q Consensus 681 ~~~~~~~~~~~------~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 754 (1035)
+..+.+.|... +.||+|+||.||+|.+ +++.||||++........ ....+.+.+|+.++++++
T Consensus 20 l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~----------~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT----------EELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp HHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCT----------TTHHHHHHHHHHHHHHCC
T ss_pred HHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcch----------HHHHHHHHHHHHHHHhcC
Confidence 34444555555 8999999999999987 488999999865322111 123578999999999999
Q ss_pred CCceeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcC-CCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEE
Q 039419 755 HKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERR-DSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNIL 833 (1035)
Q Consensus 755 hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIl 833 (1035)
||||+++++++.+.+..++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+
T Consensus 89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999999987543 34589999999999999999999999 9999999999999
Q ss_pred EcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch--
Q 039419 834 IGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL-- 911 (1035)
Q Consensus 834 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~-- 911 (1035)
++.++.+||+|||.++...............||+.|+|||+..+ .++.++||||||+++|+|++|+.||........
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 99999999999999987654333233345679999999998765 588999999999999999999999986533221
Q ss_pred hHHHHHHHhccc-hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 912 HIVDWVRQKRGA-IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 912 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
.+...+...... ...+++..... .......+..++.+||+.||++||++.+++++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDA---DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCC---CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHHhhhhhhhhhhhcccccccc---chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 111111111111 12222222221 2233345567899999999999999999999998874
No 65
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.2e-39 Score=380.76 Aligned_cols=376 Identities=20% Similarity=0.203 Sum_probs=274.3
Q ss_pred CCcccee--EEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCC
Q 039419 17 NPCKWSH--ITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGV 94 (1035)
Q Consensus 17 ~~c~w~g--i~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~ 94 (1035)
..|.|.+ |.|+..+ +. .+|. +. ++|++|+|++|.+++..|..++.+++|++|+|++|.+.+.+
T Consensus 6 ~~c~~~~~~~~c~~~~-----------l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i 70 (455)
T 3v47_A 6 SECSVIGYNAICINRG-----------LH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVI 70 (455)
T ss_dssp -CCEEETTEEECCSSC-----------CS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEE
T ss_pred ceeEEEccccCcCCCC-----------cc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceE
Confidence 4577776 8887543 11 2333 22 56777777777777666667777777777777777766444
Q ss_pred -ChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchh--hccccccceeecCCCcccCCCCCCc-
Q 039419 95 -PSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVE--LGKLVNLEVIRAGGNKDIAGKIPYE- 170 (1035)
Q Consensus 95 -p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~--l~~l~~L~~L~l~~n~~~~~~~~~~- 170 (1035)
|..|.++++|++|+|++|++++..|..++.+++|++|+|++|.+++.+|.. ++.+++|++|++++|. +.+..|..
T Consensus 71 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~ 149 (455)
T 3v47_A 71 RNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNN-IKKIQPASF 149 (455)
T ss_dssp CTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSB-CCSCCCCGG
T ss_pred CcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCc-cCccCcccc
Confidence 455677777777777777777656667777777777777777776545544 7777777777777775 34444544
Q ss_pred CCCccceEEEEeccccccccCccccccc--ccccceeecccccccCCccc--------cccCcCCceEEecCCcCCCCCC
Q 039419 171 IGDCQSLLVVGLADTKVAGSLPASLGKL--SKLQSLSVYTTMLSGEIPPQ--------IGNCSELVDLFLYENDLSGSLP 240 (1035)
Q Consensus 171 ~~~l~~L~~L~l~~~~~~~~~p~~l~~l--~~L~~L~l~~n~l~~~~p~~--------l~~l~~L~~L~L~~n~l~~~~~ 240 (1035)
+..+++|++|++++|.+.+..|..+..+ .+|+.|++++|.+.+..+.. +..+++|+.|+|++|.+++..|
T Consensus 150 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~ 229 (455)
T 3v47_A 150 FLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMA 229 (455)
T ss_dssp GGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHH
T ss_pred cCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccch
Confidence 6677777777777777777777777665 57777777777776433332 2355677777777777776666
Q ss_pred hhhhcc---cchhHhhccccccccc----------CCccccC--CCCCcEEEccCccCCCCCCccccCCCCCcEEEccCC
Q 039419 241 RELGKL---QKLEKMLLWQNNFDGA----------IPEEIGN--CKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNN 305 (1035)
Q Consensus 241 ~~l~~l---~~L~~L~l~~n~l~~~----------~p~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 305 (1035)
..+..+ ++|+.|++++|.+.+. .+..+.. .++|+.|++++|.+++..|..|..+++|++|+|++|
T Consensus 230 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 309 (455)
T 3v47_A 230 KRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQN 309 (455)
T ss_dssp HHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred hhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCC
Confidence 666554 6777777776654322 2222222 368999999999999888889999999999999999
Q ss_pred ccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEecc
Q 039419 306 NISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLI 385 (1035)
Q Consensus 306 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 385 (1035)
++.+..+..|.++++|++|+|++|+|+. ..|..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 310 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~----------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 379 (455)
T 3v47_A 310 EINKIDDNAFWGLTHLLKLNLSQNFLGS----------IDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALD 379 (455)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCE----------ECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred cccccChhHhcCcccCCEEECCCCccCC----------cChhHhcCcccCCEEECCCCcccccChhhccccccccEEECC
Confidence 9998888899999999999999998864 345778899999999999999998888899999999999999
Q ss_pred ccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCc
Q 039419 386 SNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLP 432 (1035)
Q Consensus 386 ~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~ 432 (1035)
+|+|++..+..+. .+++|++|+|++|.+++..|
T Consensus 380 ~N~l~~~~~~~~~--------------~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 380 TNQLKSVPDGIFD--------------RLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp SSCCSCCCTTTTT--------------TCTTCCEEECCSSCBCCCTT
T ss_pred CCccccCCHhHhc--------------cCCcccEEEccCCCcccCCC
Confidence 9999976665544 45679999999999998777
No 66
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1e-39 Score=371.27 Aligned_cols=262 Identities=26% Similarity=0.407 Sum_probs=197.4
Q ss_pred hccccCCeeeeeCCcEEEEEEEC----CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME----NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
++|...+.||+|+||.||+|++. ++..||||++...... ...+.|.+|+.++++++||||+++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~ 111 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-------------KQRRDFLGEASIMGQFDHPNIIRL 111 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCH-------------HHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCH-------------HHHHHHHHHHHHHHhCCCCCCCeE
Confidence 57899999999999999999765 4778999999653221 125679999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++++.+.+..|+||||+++|+|.++++..+ ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+|
T Consensus 112 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~k 187 (373)
T 2qol_A 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187 (373)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEE
T ss_pred EEEEeeCCceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEE
Confidence 999999999999999999999999997653 3489999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccCCcc-ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 842 IADFGLAKLVVEGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
|+|||+++........ .......+++.|+|||+..+..++.++||||||+++|||++ |+.||..... ......+..
T Consensus 188 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~~~i~~ 265 (373)
T 2qol_A 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVIKAVDE 265 (373)
T ss_dssp ECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHHHHHHT
T ss_pred ECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc
Confidence 9999999876543211 11123346788999999998999999999999999999998 9999965422 112222111
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
......+.. ....+..++.+||+.||++||++.++++.|+.+.....
T Consensus 266 ----------~~~~~~~~~--~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 266 ----------GYRLPPPMD--CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp ----------TEECCCCTT--CBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred ----------CCCCCCCcc--ccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 111111111 11234557888999999999999999999999876543
No 67
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-39 Score=362.89 Aligned_cols=262 Identities=26% Similarity=0.392 Sum_probs=211.8
Q ss_pred HhccccCCeeeeeCCcEEEEEEE------CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCce
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM------ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNI 758 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni 758 (1035)
.++|...+.||+|+||.||+|.+ .+++.||||++....... ..+.+.+|+.++++++||||
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~hp~i 88 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS-------------ELRDLLSEFNVLKQVNHPHV 88 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHH-------------HHHHHHHHHHHHTTCCCTTB
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHH-------------HHHHHHHHHHHHhhCCCCce
Confidence 46788999999999999999976 235889999996543211 24678999999999999999
Q ss_pred eeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC----------------------CCCCHHHHHHHHHHHHHHHHHhhc
Q 039419 759 VRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD----------------------SCLEWELRYRIILGAAQGLAYLHH 816 (1035)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~~L~~LH~ 816 (1035)
+++++++.+.+..|+||||+++|+|.+++..... ..+++..+..++.||++||+|||+
T Consensus 89 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 168 (314)
T 2ivs_A 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168 (314)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986543 337899999999999999999999
Q ss_pred cCCCCeeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHH
Q 039419 817 DCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEV 896 (1035)
Q Consensus 817 ~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~el 896 (1035)
. +|+||||||+||+++.++.+||+|||+++...............+|+.|+|||+..+..++.++||||||+++|||
T Consensus 169 ~---~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 245 (314)
T 2ivs_A 169 M---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245 (314)
T ss_dssp T---TEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred C---CCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHH
Confidence 9 9999999999999999999999999999876554433334455688999999999888899999999999999999
Q ss_pred Hh-CCCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 897 LT-GKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 897 lt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
++ |+.||...... .....+.... ........+ ..+..++.+||+.||++||++.++++.|+++..
T Consensus 246 ~t~g~~p~~~~~~~--~~~~~~~~~~------~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 246 VTLGGNPYPGIPPE--RLFNLLKTGH------RMERPDNCS------EEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HTTSCCSSTTCCGG--GHHHHHHTTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCCHH--HHHHHhhcCC------cCCCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99 99999765332 2222222111 000111111 223457888999999999999999999999865
Q ss_pred h
Q 039419 976 E 976 (1035)
Q Consensus 976 ~ 976 (1035)
.
T Consensus 312 ~ 312 (314)
T 2ivs_A 312 K 312 (314)
T ss_dssp T
T ss_pred h
Confidence 4
No 68
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9.1e-40 Score=355.00 Aligned_cols=257 Identities=25% Similarity=0.400 Sum_probs=208.3
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||.||+|++.++..||+|++..... ..+++.+|++++++++||||+++++++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~h~~i~~~~~~~ 72 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---------------SEDEFFQEAQTMMKLSHPKLVKFYGVC 72 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---------------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---------------cHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 67889999999999999999999888999999965322 245789999999999999999999999
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
.+.+..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 73 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Df 148 (268)
T 3sxs_A 73 SKEYPIYIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDF 148 (268)
T ss_dssp CSSSSEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCT
T ss_pred ccCCceEEEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccC
Confidence 99999999999999999999997653 2489999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccch
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
|.++....... .......+|+.|+|||+..+..++.++||||+|+++|||++ |+.||...... .....+....
T Consensus 149 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~--- 222 (268)
T 3sxs_A 149 GMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVLKVSQGH--- 222 (268)
T ss_dssp TCEEECCTTCE-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTC---
T ss_pred ccceecchhhh-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHHHHHHcCC---
Confidence 99987655432 22234567888999999988889999999999999999999 99999754221 1111111100
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
........+ ..+..++.+||+.||++|||+.|+++.|+.+...
T Consensus 223 ---~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 223 ---RLYRPHLAS------DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ---CCCCCTTSC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ---CCCCCCcCh------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 000011111 1234578889999999999999999999887543
No 69
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-39 Score=357.34 Aligned_cols=269 Identities=19% Similarity=0.262 Sum_probs=206.5
Q ss_pred hccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|.+.+.||+|+||+||+|.+.. ++.||||++...... ...+.+.+|++++++++||||++++++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~~~~ 75 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-------------RPVDVQMREFEVLKKLNHKNIVKLFAI 75 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-------------SCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc-------------chHHHHHHHHHHHHhcCCCCcceEEEE
Confidence 578899999999999999998764 899999999643221 125678899999999999999999999
Q ss_pred EEcCC--cceEEEEeCCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE----cCC
Q 039419 765 CWNRN--TRLLMYDYMPNGSLGSLLHERRD-SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI----GPE 837 (1035)
Q Consensus 765 ~~~~~--~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll----~~~ 837 (1035)
+...+ ..|+||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||++ +.+
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 152 (319)
T 4euu_A 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQ 152 (319)
T ss_dssp EECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSC
T ss_pred eecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCC
Confidence 98765 67999999999999999976543 3389999999999999999999999 99999999999999 788
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccc--------cCCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY--------MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPE 909 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~ 909 (1035)
+.+||+|||+++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 153 ~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 229 (319)
T 4euu_A 153 SVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (319)
T ss_dssp EEEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG
T ss_pred ceEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 8899999999987654332 23467999999999865 577899999999999999999999999754322
Q ss_pred ch--hHHHHHHHhccch--hhh----------cccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 039419 910 GL--HIVDWVRQKRGAI--EVL----------DKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEI 973 (1035)
Q Consensus 910 ~~--~~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~ 973 (1035)
.. .....+....... ..+ .................+..++.+||+.||++||+++|++++..+.
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 21 1111111111100 000 0011111111122233345688899999999999999999987664
No 70
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=372.04 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=198.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~ 762 (1035)
.++|...+.||+|+||+||+|+++ +++.||||++........ ...+.+.+|..+++.+ +||||++++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~-----------~~~~~~~~E~~il~~~~~hp~Iv~l~ 90 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-----------DDVECTMTEKRILSLARNHPFLTQLF 90 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHH-----------TTHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcch-----------hHHHHHHHHHHHHHhccCCCceeeEE
Confidence 478999999999999999999876 489999999965322211 2256788999999988 699999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+.+..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. +|+||||||+|||++.++++||
T Consensus 91 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL 165 (353)
T 3txo_A 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKL 165 (353)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEE
Confidence 999999999999999999999999987654 89999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
+|||+|+...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+....
T Consensus 166 ~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~- 240 (353)
T 3txo_A 166 ADFGMCKEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAILNDE- 240 (353)
T ss_dssp CCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-
T ss_pred ccccceeecccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--HHHHHHHHcCC-
Confidence 9999998543322 223456899999999999888899999999999999999999999975422 11111111110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTM------KDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~------~el~~~ 969 (1035)
.......+ ....+++.+||++||++||++ +|++++
T Consensus 241 ------~~~p~~~~------~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 241 ------VVYPTWLH------EDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp ------CCCCTTSC------HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred ------CCCCCCCC------HHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 00111111 123457888999999999998 777764
No 71
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2e-39 Score=369.04 Aligned_cols=258 Identities=22% Similarity=0.330 Sum_probs=200.5
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~ 762 (1035)
.++|...++||+|+||+||+|+++. ++.||||++........ ...+.+.+|..++.++ +|||||+++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~-----------~~~~~~~~E~~il~~~~~hp~Iv~l~ 119 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-----------EDIDWVQTEKHVFEQASNHPFLVGLH 119 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC---------------CCHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH-----------HHHHHHHHHHHHHHhcCCCCCcCeeE
Confidence 3679999999999999999998764 78999999975433222 1235688999999887 899999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+++..|+||||++||+|..++...+. +++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 120 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL 194 (396)
T 4dc2_A 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKL 194 (396)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEECCEEEEEEEcCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEE
Confidence 999999999999999999999999987654 89999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch---hHHHHHHH
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL---HIVDWVRQ 919 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~---~~~~~~~~ 919 (1035)
+|||+|+...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+..
T Consensus 195 ~DFGla~~~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~ 272 (396)
T 4dc2_A 195 TDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 272 (396)
T ss_dssp CCCTTCBCCCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH
T ss_pred eecceeeecccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH
Confidence 9999998633322 223467899999999999999999999999999999999999999964321110 00011110
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTM------KDVAAM 969 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~------~el~~~ 969 (1035)
. ........ + ..+ ...+.+++.+||++||++||++ +|++++
T Consensus 273 ~-----i~~~~~~~-p-~~~--s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 273 V-----ILEKQIRI-P-RSL--SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp H-----HHHCCCCC-C-TTS--CHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred H-----HhccccCC-C-CcC--CHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 0 00111111 1 111 1233557888999999999985 566553
No 72
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.1e-40 Score=372.22 Aligned_cols=263 Identities=24% Similarity=0.360 Sum_probs=208.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEE------CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCc
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM------ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKN 757 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpn 757 (1035)
.++|...+.||+|+||.||+|++ .+++.||||++....... ..+.+.+|+++++++ +|||
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~~hpn 87 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-------------EHRALMSELKILIHIGHHLN 87 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH-------------HHHHHHHHHHHHHHHCCCTT
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHH-------------HHHHHHHHHHHHHhhcCCcc
Confidence 47899999999999999999974 236889999996543221 246799999999999 7999
Q ss_pred eeeEEeEEEcCCc-ceEEEEeCCCCChhhhhhhcCC--------------------------------------------
Q 039419 758 IVRFLGCCWNRNT-RLLMYDYMPNGSLGSLLHERRD-------------------------------------------- 792 (1035)
Q Consensus 758 iv~l~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------- 792 (1035)
|+++++++.+.+. .++||||+++|+|.++++....
T Consensus 88 iv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp BCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 9999999987654 8999999999999999976542
Q ss_pred --------------------CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeeccCccccc
Q 039419 793 --------------------SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVV 852 (1035)
Q Consensus 793 --------------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~ 852 (1035)
..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 1288999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccchhhhcccc
Q 039419 853 EGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSL 931 (1035)
Q Consensus 853 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1035)
............||+.|+|||+..+..++.++||||||+++|||++ |+.||....... .....+.... ....
T Consensus 245 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~------~~~~ 317 (359)
T 3vhe_A 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGT------RMRA 317 (359)
T ss_dssp SCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTC------CCCC
T ss_pred ccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCC------CCCC
Confidence 5433333445678999999999988999999999999999999998 999997653322 1112211110 0001
Q ss_pred cCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 932 RARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 932 ~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
....+ ..+.+++.+||++||++||+++|++++|+++...
T Consensus 318 ~~~~~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 318 PDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCC------HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 11111 1235578889999999999999999999998754
No 73
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.3e-40 Score=365.79 Aligned_cols=250 Identities=23% Similarity=0.372 Sum_probs=201.5
Q ss_pred HhccccCCeeeeeCCcEEEEEEE-CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM-ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|.+.+.||+|+||.||+|.+ .+++.||||++........ ...+.+.+|+.+++.++||||+++++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hpnIv~l~~ 76 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKS-----------DMHMRVEREISYLKLLRHPHIIKLYD 76 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCSHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccch-----------hHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35789999999999999999987 4689999999864322111 12457899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+++..|+||||+ +|+|.+++...+. +++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 77 ~~~~~~~~~lv~E~~-~g~l~~~l~~~~~--l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~ 150 (336)
T 3h4j_B 77 VITTPTDIVMVIEYA-GGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIA 150 (336)
T ss_dssp EEECSSEEEEEECCC-CEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEEC
T ss_pred EEEeCCEEEEEEECC-CCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEE
Confidence 999999999999999 7899999877654 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|||++........ ....+||+.|+|||++.+..+ ++++||||+||++|+|++|+.||........
T Consensus 151 DFG~s~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----------- 216 (336)
T 3h4j_B 151 DFGLSNIMTDGNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL----------- 216 (336)
T ss_dssp CSSCTBTTTTSBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----------
T ss_pred EeccceeccCCcc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----------
Confidence 9999987654432 235679999999999887775 6899999999999999999999975422110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...+.......+.. . .....+++.+||+.||++|||++|++++
T Consensus 217 -~~~i~~~~~~~p~~-~--s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 217 -FKKVNSCVYVMPDF-L--SPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -BCCCCSSCCCCCTT-S--CHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -HHHHHcCCCCCccc-C--CHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00011111111111 1 1123457888999999999999999885
No 74
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=370.25 Aligned_cols=262 Identities=26% Similarity=0.365 Sum_probs=211.7
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC--------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CC
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME--------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RH 755 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 755 (1035)
.++|.+.+.||+|+||+||+|++. .+..||||++....... ..+++.+|+++++++ +|
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~~h 134 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-------------DLSDLISEMEMMKMIGKH 134 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHH-------------HHHHHHHHHHHHHHHCCC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHH-------------HHHHHHHHHHHHHHhcCC
Confidence 367889999999999999999752 24679999996543221 246789999999999 89
Q ss_pred CceeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhccCCCC
Q 039419 756 KNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD--------------SCLEWELRYRIILGAAQGLAYLHHDCVPP 821 (1035)
Q Consensus 756 pniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 821 (1035)
|||+++++++.+++..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +
T Consensus 135 pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 211 (382)
T 3tt0_A 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---K 211 (382)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred chhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 9999999999999999999999999999999987542 3489999999999999999999999 9
Q ss_pred eeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 039419 822 IVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GK 900 (1035)
Q Consensus 822 ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~ 900 (1035)
|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |.
T Consensus 212 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~ 291 (382)
T 3tt0_A 212 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 291 (382)
T ss_dssp CCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred EecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999987655443344445678899999999999999999999999999999999 99
Q ss_pred CCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 901 QPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 901 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
.||..... ......+.... ........+ ..+..++.+||++||++||+++|+++.|+.+...
T Consensus 292 ~p~~~~~~--~~~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 292 SPYPGVPV--EELFKLLKEGH------RMDKPSNCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp CSSTTCCH--HHHHHHHHTTC------CCCCCSSCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCH--HHHHHHHHcCC------CCCCCccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 99975421 12222221111 000111111 1234578889999999999999999999998643
No 75
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.5e-39 Score=360.75 Aligned_cols=263 Identities=14% Similarity=0.156 Sum_probs=208.3
Q ss_pred hccccCCeeeeeCCcEEEEEEE-CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEM-ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~ 763 (1035)
++|...+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+.+++++ +||||+++++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------------~~~~~~E~~~l~~l~~h~~i~~~~~ 72 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----------------APQLHLEYRFYKQLGSGDGIPQVYY 72 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----------------SCCHHHHHHHHHHHCSCTTSCCEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----------------hHHHHHHHHHHHHhhCCCCCCEEEE
Confidence 5688899999999999999976 4689999999854321 23588999999999 8999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc----
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE---- 839 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~---- 839 (1035)
++.+.+..|+||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 73 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~ 147 (330)
T 2izr_A 73 FGPCGKYNAMVLELL-GPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQ 147 (330)
T ss_dssp EEEETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTT
T ss_pred EEecCCccEEEEEeC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCc
Confidence 999999999999999 999999998652 3489999999999999999999999 9999999999999998887
Q ss_pred -eEEeeccCccccccCCccc-----cccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch-h
Q 039419 840 -PYIADFGLAKLVVEGDFAR-----SSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL-H 912 (1035)
Q Consensus 840 -~kl~DFG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~-~ 912 (1035)
+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~ 227 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE 227 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH
Confidence 9999999998765433211 12456899999999999999999999999999999999999999986543321 1
Q ss_pred HHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 913 IVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
....+.... ............ + .+..++..||+.||.+||+++++.+.|+++.....
T Consensus 228 ~~~~i~~~~--~~~~~~~~~~~~----p---~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 228 RYQKIGDTK--RATPIEVLCENF----P---EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp HHHHHHHHH--HHSCHHHHTTTC----H---HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhh--ccCCHHHHhccC----h---HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 111111100 000000000111 1 44567888999999999999999999998866543
No 76
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=367.47 Aligned_cols=264 Identities=27% Similarity=0.433 Sum_probs=209.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCce
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNI 758 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni 758 (1035)
.++|...+.||+|+||.||+|++. +++.||||++...... ...+.+.+|+.++++++||||
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hp~i 112 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA-------------DMQADFQREAALMAEFDNPNI 112 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCH-------------HHHHHHHHHHHHHHTCCCTTB
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCH-------------HHHHHHHHHHHHHHhCCCCCE
Confidence 368899999999999999999774 3488999999654321 125689999999999999999
Q ss_pred eeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC----------------------CCCCHHHHHHHHHHHHHHHHHhhc
Q 039419 759 VRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD----------------------SCLEWELRYRIILGAAQGLAYLHH 816 (1035)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~~L~~LH~ 816 (1035)
+++++++.+.+..|+||||+++|+|.+++..... ..+++..++.++.||++||+|||+
T Consensus 113 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~ 192 (343)
T 1luf_A 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE 192 (343)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999976421 458999999999999999999999
Q ss_pred cCCCCeeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHH
Q 039419 817 DCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEV 896 (1035)
Q Consensus 817 ~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~el 896 (1035)
. +|+||||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||
T Consensus 193 ~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el 269 (343)
T 1luf_A 193 R---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269 (343)
T ss_dssp T---TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred C---CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHH
Confidence 9 9999999999999999999999999999876544333334456789999999999888999999999999999999
Q ss_pred Hh-CCCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 897 LT-GKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 897 lt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
++ |..||..... ......+..... .......+ ..+..++.+||+.||++||++.++++.|+++..
T Consensus 270 ~t~g~~p~~~~~~--~~~~~~~~~~~~------~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 270 FSYGLQPYYGMAH--EEVIYYVRDGNI------LACPENCP------LELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp HTTTCCTTTTSCH--HHHHHHHHTTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HhcCCCcCCCCCh--HHHHHHHhCCCc------CCCCCCCC------HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 99 9999975422 112222111100 00111111 134457888999999999999999999998865
Q ss_pred hHH
Q 039419 976 ERE 978 (1035)
Q Consensus 976 ~~~ 978 (1035)
..+
T Consensus 336 ~~~ 338 (343)
T 1luf_A 336 RAE 338 (343)
T ss_dssp ---
T ss_pred hhh
Confidence 443
No 77
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2e-39 Score=355.37 Aligned_cols=258 Identities=24% Similarity=0.391 Sum_probs=206.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
.++|...+.||+|+||+||+|++.++..||+|++..... ..+++.+|++++++++||||++++++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~h~~i~~~~~~ 87 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------------SEDEFIEEAKVMMNLSHEKLVQLYGV 87 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---------------CHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---------------CHHHHHHHHHHHhcCCCCCEeeEEEE
Confidence 367889999999999999999999888999999965322 24578999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~D 163 (283)
T 3gen_A 88 CTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSD 163 (283)
T ss_dssp ECSSSSEEEEECCCTTCBHHHHHHCGGG-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECS
T ss_pred EecCCCeEEEEeccCCCcHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcc
Confidence 9999999999999999999999976432 389999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||.++....... .......+|+.|+|||+..+..++.++||||+|+++|||++ |+.||...... .....+...
T Consensus 164 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~--- 237 (283)
T 3gen_A 164 FGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQG--- 237 (283)
T ss_dssp TTGGGGBCCHHH-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTT---
T ss_pred cccccccccccc-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhcc---
Confidence 999987644321 22334567889999999988899999999999999999998 99999754221 111111110
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
.........+ ..+.+++.+||+.||++||++++++++|+++..+
T Consensus 238 ---~~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 238 ---LRLYRPHLAS------EKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ---CCCCCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---cCCCCCCcCC------HHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 0000111111 1234578889999999999999999999988643
No 78
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.9e-39 Score=361.61 Aligned_cols=261 Identities=25% Similarity=0.404 Sum_probs=201.5
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcE----EEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEV----IAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
++|...+.||+|+||+||+|++. +++. ||+|.+...... ...+.|.+|+.++++++||||++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~ 81 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-------------KANKEILDEAYVMASVDNPHVCR 81 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------------------CHHHHHHHHHHHHHCCBTTBCC
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCH-------------HHHHHHHHHHHHHHhCCCCCEeE
Confidence 56889999999999999999865 3443 577777532211 23568999999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++.+.+ .++||||+.+|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~ 156 (327)
T 3poz_A 82 LLGICLTST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp EEEEEESSS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEE
T ss_pred EEEEEecCC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCE
Confidence 999998754 789999999999999998754 3489999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+..
T Consensus 157 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~ 234 (327)
T 3poz_A 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEK 234 (327)
T ss_dssp EECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHT
T ss_pred EEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHc
Confidence 9999999987765443333445567889999999999999999999999999999999 99999764332 22222221
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
... . ..+.. ....+..++.+||+.||++||++.+++++|+.+.+...
T Consensus 235 ~~~--------~-~~~~~---~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~ 281 (327)
T 3poz_A 235 GER--------L-PQPPI---CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 281 (327)
T ss_dssp TCC--------C-CCCTT---BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHH
T ss_pred CCC--------C-CCCcc---CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhh
Confidence 110 0 01111 11234567888999999999999999999999876544
No 79
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=359.73 Aligned_cols=249 Identities=23% Similarity=0.293 Sum_probs=202.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|+.+ +|+.||+|++........ ...+.+.+|+.+++.++||||+++++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hp~Iv~~~~ 73 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL-----------KQVEHTNDERLMLSIVTHPFIIRMWG 73 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHHSCCBTTBCCEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-----------hHHHHHHHHHHHHhhCCCCCCceEeE
Confidence 367899999999999999999876 589999999965322111 23567889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||++||+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.+|.+||+
T Consensus 74 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~ 148 (318)
T 1fot_A 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKIT 148 (318)
T ss_dssp EEECSSEEEEEECCCCSCBHHHHHHHTSS--CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEEC
T ss_pred EEEeCCEEEEEEeCCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEe
Confidence 99999999999999999999999987544 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||+++..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 149 Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~-- 219 (318)
T 1fot_A 149 DFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEKILNAE-- 219 (318)
T ss_dssp CCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHCC--
T ss_pred ecCcceecCCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC--
Confidence 99999865332 2356899999999999999999999999999999999999999975321 11111111100
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRP-----TMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RP-----s~~el~~~ 969 (1035)
.......+ ..+.+++.+|+..||++|| ++++++++
T Consensus 220 -----~~~p~~~~------~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 220 -----LRFPPFFN------EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp -----CCCCTTSC------HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----CCCCCCCC------HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 00111111 1234577889999999999 88888874
No 80
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.3e-39 Score=355.46 Aligned_cols=260 Identities=27% Similarity=0.364 Sum_probs=199.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhc--CCCCceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGS--IRHKNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~ 762 (1035)
.++|...+.||+|+||+||+|++ +++.||||++... ..+.+.+|.+++.. ++||||++++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----------------~~~~~~~e~~~~~~~~l~h~niv~~~ 68 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----------------DEKSWFRETELYNTVMLRHENILGFI 68 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----------------GHHHHHHHHHHHHHTCCCCTTBCCEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----------------cchhhHHHHHHHHHhhccCcCeeeEE
Confidence 46789999999999999999988 5899999998542 13456667777666 7999999999
Q ss_pred eEEEcC----CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhh--------ccCCCCeeccCCCcc
Q 039419 763 GCCWNR----NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLH--------HDCVPPIVHRDIKAN 830 (1035)
Q Consensus 763 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivHrDikp~ 830 (1035)
+++.+. ...|+||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~ 142 (301)
T 3q4u_A 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSK 142 (301)
T ss_dssp EEEEEEETTEEEEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGG
T ss_pred EeeccccCCCceeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChH
Confidence 997653 4579999999999999999653 3899999999999999999999 77 9999999999
Q ss_pred cEEEcCCCceEEeeccCccccccCCcc--ccccccCCcccccCCcccccC------CCCccccchhHHHHHHHHHhC---
Q 039419 831 NILIGPEFEPYIADFGLAKLVVEGDFA--RSSNTVAGSYGYIAPEYGYMM------KITEKSDVYSYGVVVLEVLTG--- 899 (1035)
Q Consensus 831 NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGvvl~elltg--- 899 (1035)
||+++.++.+||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 143 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~ 222 (301)
T 3q4u_A 143 NILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS 222 (301)
T ss_dssp GEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred hEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcC
Confidence 999999999999999999876543321 112345799999999998766 455799999999999999999
Q ss_pred -------CCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCc--ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039419 900 -------KQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPE--VEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMI 970 (1035)
Q Consensus 900 -------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L 970 (1035)
+.||....+.............. .......+. ........+.+++.+||+.||++|||+.|+++.|
T Consensus 223 ~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 297 (301)
T 3q4u_A 223 NGIVEDYKPPFYDVVPNDPSFEDMRKVVCV-----DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297 (301)
T ss_dssp TTBCCCCCCTTTTTSCSSCCHHHHHHHHTT-----SCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred ccccccccccccccCCCCcchhhhhHHHhc-----cCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHH
Confidence 88886554433322222211100 000011111 1112334456789999999999999999999999
Q ss_pred HHH
Q 039419 971 KEI 973 (1035)
Q Consensus 971 ~~~ 973 (1035)
+++
T Consensus 298 ~~i 300 (301)
T 3q4u_A 298 TKI 300 (301)
T ss_dssp HHH
T ss_pred hcc
Confidence 875
No 81
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=371.81 Aligned_cols=258 Identities=19% Similarity=0.212 Sum_probs=205.1
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
....++|...+.||+|+||+||+|.+. +|+.||+|++........ ..+.+.+|+.++++++||||++
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~------------~~~~~~~E~~il~~l~hpnIv~ 74 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR------------DHQKLEREARICRLLKHPNIVR 74 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHH------------HHHHHHHHHHHHHHCCBTTBCC
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHH------------HHHHHHHHHHHHHhCCCcCCCe
Confidence 456688999999999999999999765 689999999976543221 2467899999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc---CC
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG---PE 837 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~---~~ 837 (1035)
+++++.+++..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. ||+||||||+||+++ .+
T Consensus 75 l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~--~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~ 149 (444)
T 3soa_A 75 LHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKG 149 (444)
T ss_dssp EEEEEECSSEEEEEECCCBCCBHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTT
T ss_pred EEEEEEECCEEEEEEEeCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCC
Confidence 99999999999999999999999999987654 89999999999999999999999 999999999999998 46
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+.+||+|||+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||.... .......+
T Consensus 150 ~~vkL~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--~~~~~~~i 225 (444)
T 3soa_A 150 AAVKLADFGLAIEVEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQQI 225 (444)
T ss_dssp CCEEECCCSSCBCCCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHH
T ss_pred CcEEEccCceeEEecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--HHHHHHHH
Confidence 789999999998765432 22235689999999999998899999999999999999999999996532 11222222
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..... ....+ .....+ ..+.+++.+||++||++|||+.|++++
T Consensus 226 ~~~~~--~~~~~-~~~~~s------~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 226 KAGAY--DFPSP-EWDTVT------PEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHTCC--CCCTT-TTTTSC------HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhCCC--CCCcc-ccccCC------HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11110 00000 001111 223457888999999999999999884
No 82
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=359.29 Aligned_cols=260 Identities=21% Similarity=0.274 Sum_probs=206.3
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.+.+.|...+.||+|+||.||+|.+. +++.||+|++......... .....+.+.+|+.++++++||||+++
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--------~~~~~~~~~~E~~~l~~l~hp~iv~~ 79 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR--------RGVSREDIEREVSILKEIQHPNVITL 79 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS--------SSBCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc--------chhhHHHHHHHHHHHHhCCCCCCCcE
Confidence 45578999999999999999999876 5899999999754332211 01235789999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC---
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF--- 838 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~--- 838 (1035)
++++.+.+..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 80 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 154 (326)
T 2y0a_A 80 HEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPK 154 (326)
T ss_dssp EEEEECSSEEEEEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSS
T ss_pred EEEEEeCCEEEEEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCC
Confidence 999999999999999999999999997654 389999999999999999999999 999999999999999887
Q ss_pred -ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 839 -EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 839 -~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
.+||+|||+++...... ......||+.|+|||+..+..++.++|||||||++|+|++|+.||..... ......+
T Consensus 155 ~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~~ 229 (326)
T 2y0a_A 155 PRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANV 229 (326)
T ss_dssp CCEEECCCTTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHH
T ss_pred CCEEEEECCCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHH
Confidence 79999999998764432 22356799999999999888999999999999999999999999975321 1111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..... ..........+ ....+++.+||++||++|||+.|++++
T Consensus 230 ~~~~~---~~~~~~~~~~~------~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 230 SAVNY---EFEDEYFSNTS------ALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHTCC---CCCHHHHTTSC------HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhcCC---CcCccccccCC------HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11100 00000001111 123457888999999999999999984
No 83
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=366.65 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=201.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|.+.+.||+|+||.||+|++. +++.||+|++........ ...+.+.+|+.+++.++|||||++++
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~-----------~~~~~~~~E~~il~~l~hp~Iv~l~~ 82 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVER-----------NEVRNVFKELQIMQGLEHPFLVNLWY 82 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccH-----------HHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 367999999999999999999776 488999999864322111 23567899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||+.||+|.+++..... +++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 157 (384)
T 4fr4_A 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHIT 157 (384)
T ss_dssp EEECSSEEEEEECCCTTEEHHHHHHTTCC--CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEe
Confidence 99999999999999999999999976543 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCccccc---CCCCccccchhHHHHHHHHHhCCCCCCCCCCCch-hHHHHHHH
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM---MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL-HIVDWVRQ 919 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~-~~~~~~~~ 919 (1035)
|||+++...... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....+..
T Consensus 158 DFG~a~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~ 234 (384)
T 4fr4_A 158 DFNIAAMLPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET 234 (384)
T ss_dssp CCTTCEECCTTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH
T ss_pred ccceeeeccCCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh
Confidence 999998764432 2346789999999999763 4589999999999999999999999975433221 11111111
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPT-MKDVAA 968 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs-~~el~~ 968 (1035)
. ........+ ..+..++.+||++||++||+ ++++.+
T Consensus 235 ~-------~~~~p~~~s------~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 235 T-------VVTYPSAWS------QEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp C-------CCCCCTTSC------HHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred c-------ccCCCCcCC------HHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0 000111111 23355788899999999998 777765
No 84
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.7e-39 Score=357.90 Aligned_cols=248 Identities=21% Similarity=0.336 Sum_probs=200.3
Q ss_pred cccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEEE
Q 039419 688 LVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCCW 766 (1035)
Q Consensus 688 ~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 766 (1035)
|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++++||||+++++++.
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--------------QRRELLFNEVVIMRDYQHFNVVEMYKSYL 112 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------------CSHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--------------hHHHHHHHHHHHHHhCCCCCcceEEEEEE
Confidence 666679999999999999876 699999999864321 12467899999999999999999999999
Q ss_pred cCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeecc
Q 039419 767 NRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFG 846 (1035)
Q Consensus 767 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG 846 (1035)
..+..|+||||+++|+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 113 ~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 186 (321)
T 2c30_A 113 VGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFG 186 (321)
T ss_dssp ETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred ECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeee
Confidence 999999999999999999998653 389999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccchhh
Q 039419 847 LAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAIEV 926 (1035)
Q Consensus 847 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1035)
+++....... ......||+.|+|||+..+..++.++||||||+++|||++|+.||..... ......+....
T Consensus 187 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~----- 257 (321)
T 2c30_A 187 FCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDSP----- 257 (321)
T ss_dssp TCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSS-----
T ss_pred eeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcCC-----
Confidence 9987654322 22456799999999999988999999999999999999999999975422 11111211110
Q ss_pred hcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 927 LDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.+.... .... ...+.+++.+||+.||++||+++|++++
T Consensus 258 -~~~~~~--~~~~--~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 258 -PPKLKN--SHKV--SPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp -CCCCTT--GGGS--CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -CCCcCc--cccC--CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 0001 1123457788999999999999999885
No 85
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.2e-40 Score=366.38 Aligned_cols=251 Identities=23% Similarity=0.348 Sum_probs=202.5
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~ 762 (1035)
.++|...+.||+|+||.||+|+++ +++.||||++........ ...+.+.+|..+++.+ +||||++++
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~E~~il~~~~~hp~iv~l~ 84 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD-----------DDVECTMVEKRVLSLAWEHPFLTHMF 84 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhh-----------hhHHHHHHHHHHHHhcCCCCCCCcEE
Confidence 478999999999999999999876 589999999965322111 1246788999999987 899999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+.+..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. ||+||||||+||+++.+|.+||
T Consensus 85 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEE
Confidence 999999999999999999999999987654 89999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
+|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+....
T Consensus 160 ~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~- 234 (345)
T 1xjd_A 160 ADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDN- 234 (345)
T ss_dssp CCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-
T ss_pred eEChhhhhcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHhCC-
Confidence 9999998643322 223467899999999999998999999999999999999999999975421 11222111110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHH-HHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMK-DVAA 968 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~-el~~ 968 (1035)
.......+ ..+.+++.+||+.||++||++. ++++
T Consensus 235 ------~~~p~~~s------~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 235 ------PFYPRWLE------KEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ------CCCCTTSC------HHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ------CCCCcccC------HHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 11111111 1234578889999999999997 7765
No 86
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3e-39 Score=361.22 Aligned_cols=261 Identities=26% Similarity=0.365 Sum_probs=202.2
Q ss_pred hccccCCeeeeeCCcEEEEEEECC-CcE----EEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN-GEV----IAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~-~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
++|...+.||+|+||+||+|.+.. ++. ||+|.+....... ..+.+.+|+.++++++||||++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~-------------~~~~~~~e~~~l~~l~h~~iv~ 79 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ-------------SFQAVTDHMLAIGSLDHAHIVR 79 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCS-------------CBCSCCHHHHHHHTCCCTTBCC
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHH-------------HHHHHHHHHHHHhcCCCCCcCe
Confidence 468888999999999999997653 443 7788775432211 1235678999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++. .+..++||||+++|+|.+++...+ ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 80 ~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~ 154 (325)
T 3kex_A 80 LLGLCP-GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQV 154 (325)
T ss_dssp EEEEEC-BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCE
T ss_pred EEEEEc-CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeE
Confidence 999886 466889999999999999997643 2488899999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|||+++...............||..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+..
T Consensus 155 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~ 232 (325)
T 3kex_A 155 QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEK 232 (325)
T ss_dssp EECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHT
T ss_pred EECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHc
Confidence 9999999998765544334455678889999999998899999999999999999999 99999764332 22222221
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
... .......+. .+..++.+||+.||++||++.+++++|+.+.+...
T Consensus 233 ~~~------~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~ 279 (325)
T 3kex_A 233 GER------LAQPQICTI------DVYMVMVKCWMIDENIRPTFKELANEFTRMARDPP 279 (325)
T ss_dssp TCB------CCCCTTBCT------TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred CCC------CCCCCcCcH------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 110 000111111 23447778999999999999999999998865543
No 87
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.4e-39 Score=360.95 Aligned_cols=257 Identities=22% Similarity=0.329 Sum_probs=200.7
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~ 763 (1035)
++|...+.||+|+||.||+|+++ +++.||+|++........ ...+.+.+|..+++++ +||||+++++
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-----------~~~~~~~~E~~~l~~~~~hp~iv~l~~ 77 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-----------EDIDWVQTEKHVFEQASNHPFLVGLHS 77 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSH-----------HHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcch-----------HHHHHHHHHHHHHHhcCCCCccCeEEE
Confidence 57889999999999999999876 489999999965432221 2246788999999988 8999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. +|+||||||+||+++.++++||+
T Consensus 78 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~ 152 (345)
T 3a8x_A 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLT 152 (345)
T ss_dssp EEECSSEEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEE
Confidence 99999999999999999999999987654 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch---hHHHHHHHh
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL---HIVDWVRQK 920 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~---~~~~~~~~~ 920 (1035)
|||+++...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ .....+...
T Consensus 153 DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (345)
T 3a8x_A 153 DYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 230 (345)
T ss_dssp CGGGCBCSCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHH
T ss_pred eccccccccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHH
Confidence 999998643322 223457899999999999999999999999999999999999999974321100 000011000
Q ss_pred ccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 039419 921 RGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTM------KDVAAM 969 (1035)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~------~el~~~ 969 (1035)
........ +. .. ...+.+++.+||+.||++||++ +|++++
T Consensus 231 -----i~~~~~~~-p~-~~--s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 231 -----ILEKQIRI-PR-SL--SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp -----HHHCCCCC-CT-TS--CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred -----HHcCCCCC-CC-CC--CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 00111110 11 11 1234457888999999999995 566553
No 88
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.7e-39 Score=363.97 Aligned_cols=249 Identities=18% Similarity=0.206 Sum_probs=203.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|++. +|+.||||++........ ...+.+.+|+.++++++||||+++++
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hp~iv~~~~ 108 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL-----------KQIEHTLNEKRILQAVNFPFLVKLEF 108 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccH-----------HHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 367899999999999999999876 589999999864322111 23567899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 109 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~ 183 (350)
T 1rdq_E 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVT 183 (350)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEcCCEEEEEEcCCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEc
Confidence 99999999999999999999999987654 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||+++..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 184 DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~-- 254 (350)
T 1rdq_E 184 DFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSGK-- 254 (350)
T ss_dssp CCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--
T ss_pred ccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHHHHHcCC--
Confidence 99999865432 2356799999999999998999999999999999999999999975421 11111111110
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPT-----MKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs-----~~el~~~ 969 (1035)
.......+ ..+..++.+||+.||++||+ ++|++++
T Consensus 255 -----~~~p~~~~------~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 255 -----VRFPSHFS------SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -----CCCCTTCC------HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----CCCCCCCC------HHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 00111111 12345788899999999998 8888774
No 89
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.2e-39 Score=353.82 Aligned_cols=262 Identities=26% Similarity=0.374 Sum_probs=198.8
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||+||+|++. ..+|+|+++...... ...+.|.+|+.++++++||||+++++++
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 101 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTP------------EQFQAFRNEVAVLRKTRHVNILLFMGYM 101 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCH------------HHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCH------------HHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 67888999999999999999875 358999886533221 1356899999999999999999999976
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
. .+..++||||+++++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 102 ~-~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DF 176 (307)
T 3lb7_A 102 T-KDNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp C-SSSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCC
T ss_pred c-cCcEEEEEecCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccC
Confidence 4 556899999999999999997543 3489999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCcccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|+++...............||+.|+|||++. +..++.++||||||+++|||++|+.||....... .....+.....
T Consensus 177 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-~~~~~~~~~~~ 255 (307)
T 3lb7_A 177 GLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYA 255 (307)
T ss_dssp CSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHHTCC
T ss_pred CCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH-HHHHHHhcCCC
Confidence 9998654332223334567999999999875 6678899999999999999999999997543221 11111111110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
. ... .......+ ..+..++.+||+.||++||++.|+++.|+.+..
T Consensus 256 ~-~~~-~~~~~~~~------~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 256 S-PDL-SKLYKNCP------KAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp C-CCS-TTSCSSSC------HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred C-cch-hhhhcCCc------HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 0 000 00111111 123457788999999999999999999988754
No 90
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.9e-39 Score=362.84 Aligned_cols=256 Identities=21% Similarity=0.274 Sum_probs=204.2
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.+.++|...+.||+|+||.||+|.++ +++.||+|++........ ..+.+.+|+.++++++||||+++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~------------~~~~~~~E~~il~~l~hpnIv~~ 93 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR------------DFQKLEREARICRKLQHPNIVRL 93 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHH------------HHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHH------------HHHHHHHHHHHHHhCCCCCCCeE
Confidence 44578999999999999999999776 589999999965433221 24678999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC---C
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE---F 838 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~---~ 838 (1035)
++++.+.+..|+||||++||+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.+ +
T Consensus 94 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 168 (362)
T 2bdw_A 94 HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGA 168 (362)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTC
T ss_pred EEEEEeCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCC
Confidence 999999999999999999999999987654 389999999999999999999999 99999999999999865 4
Q ss_pred ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
.+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ......+.
T Consensus 169 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~ 243 (362)
T 2bdw_A 169 AVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIK 243 (362)
T ss_dssp CEEECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred CEEEeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH
Confidence 59999999998765432 22356899999999999988999999999999999999999999975321 12222221
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... .. .......+ ...+.+++.+||++||++||++.|++++
T Consensus 244 ~~~~--~~-----~~~~~~~~--~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 244 AGAY--DY-----PSPEWDTV--TPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HTCC--CC-----CTTGGGGS--CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hCCC--CC-----CcccccCC--CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1110 00 00000001 1223457888999999999999999864
No 91
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.9e-39 Score=364.92 Aligned_cols=259 Identities=18% Similarity=0.244 Sum_probs=202.8
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.+.|...+.||+|+||+||+|.++ +++.||||++......... ....+.+.+|+.+++.++||||+++++
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---------~~~~~~~~~E~~~l~~l~hpnIv~~~~ 93 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP---------GLSTEDLKREASICHMLKHPHIVELLE 93 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSS---------SCCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccc---------cchHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 467999999999999999999775 5899999998543211110 013567999999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc--
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERR--DSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE-- 839 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~-- 839 (1035)
++.+.+..|+||||++||+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 94 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~ 170 (351)
T 3c0i_A 94 TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSA 170 (351)
T ss_dssp EEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTC
T ss_pred EEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCC
Confidence 9999999999999999999998886542 23489999999999999999999999 9999999999999987654
Q ss_pred -eEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 840 -PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 840 -~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ......+.
T Consensus 171 ~vkl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~i~ 245 (351)
T 3c0i_A 171 PVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---ERLFEGII 245 (351)
T ss_dssp CEEECCCTTCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---HHHHHHHH
T ss_pred cEEEecCcceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---HHHHHHHH
Confidence 99999999987654322 2335679999999999998899999999999999999999999997531 11111111
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... ..........+ ..+.+++.+||+.||++||++.|++++
T Consensus 246 ~~~~---~~~~~~~~~~s------~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 246 KGKY---KMNPRQWSHIS------ESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HTCC---CCCHHHHTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCC---CCCccccccCC------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1100 00000001111 234567888999999999999999874
No 92
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-39 Score=358.61 Aligned_cols=252 Identities=18% Similarity=0.213 Sum_probs=203.0
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|.+. +++.||+|++.... ...+.+.+|+.+++.++||||+++++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---------------~~~~~~~~E~~~l~~l~hpnIv~~~~ 68 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---------------TDQVLVKKEISILNIARHRNILHLHE 68 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---------------HHHHHHHHHHHHHHHSCCTTBCCEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---------------ccHHHHHHHHHHHHhCCCCCCCeEeE
Confidence 467999999999999999999776 48899999986432 12456889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC--CCceE
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP--EFEPY 841 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~--~~~~k 841 (1035)
++.+.+..|+||||++||+|.+++.... ..+++..+..++.||+.||+|||+. ||+||||||+||+++. ++.+|
T Consensus 69 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~k 144 (321)
T 1tki_A 69 SFESMEELVMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIK 144 (321)
T ss_dssp EEEETTEEEEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEE
T ss_pred EEecCCEEEEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEE
Confidence 9999999999999999999999997643 3489999999999999999999999 9999999999999987 78999
Q ss_pred EeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhc
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKR 921 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 921 (1035)
|+|||+++....... .....||+.|+|||+..+..++.++||||+||++|+|++|..||..... ......+....
T Consensus 145 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~ 219 (321)
T 1tki_A 145 IIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIENIMNAE 219 (321)
T ss_dssp ECCCTTCEECCTTCE---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTC
T ss_pred EEECCCCeECCCCCc---cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHcCC
Confidence 999999987654332 2345799999999999888899999999999999999999999975422 11111111111
Q ss_pred cchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 922 GAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. ......... ...+.+++.+||++||++|||+.|++++
T Consensus 220 ~~---~~~~~~~~~------s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 220 YT---FDEEAFKEI------SIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp CC---CCHHHHTTS------CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CC---CChhhhccC------CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 000000111 1234568889999999999999999985
No 93
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3e-39 Score=363.43 Aligned_cols=252 Identities=21% Similarity=0.278 Sum_probs=202.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~ 762 (1035)
.++|...+.||+|+||.||+|+++. ++.||||++........ ...+.+.+|..++..+ +||+|++++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-----------~~~~~~~~E~~~l~~~~~hp~iv~l~ 87 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-----------DDVECTMVEKRVLALPGKPPFLTQLH 87 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHTCTTCCTTBCCEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcc-----------hHHHHHHHHHHHHHhcCCCCEEeeEE
Confidence 4679999999999999999998875 78999999965322111 2356788999999988 799999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+.+..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. ||+||||||+||+++.+|++||
T Consensus 88 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL 162 (353)
T 2i0e_A 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKI 162 (353)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEE
Confidence 999999999999999999999999987654 89999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 163 ~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~- 237 (353)
T 2i0e_A 163 ADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHN- 237 (353)
T ss_dssp CCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-
T ss_pred EeCCcccccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCC-
Confidence 9999998643322 223467899999999999999999999999999999999999999975421 11111111110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPT-----MKDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs-----~~el~~~ 969 (1035)
.......+ ..+..++.+||++||++||+ +++++++
T Consensus 238 ------~~~p~~~s------~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 ------VAYPKSMS------KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ------CCCCTTSC------HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ------CCCCCCCC------HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00111111 23345788899999999995 5677664
No 94
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-39 Score=364.28 Aligned_cols=264 Identities=23% Similarity=0.342 Sum_probs=208.0
Q ss_pred HhccccCCeeeeeCCcEEEEEEE------CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCc
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM------ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKN 757 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpn 757 (1035)
.++|...+.||+|+||.||+|.+ .+++.||||++...... ...+.+.+|+.+++++ +|||
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~~hp~ 110 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS-------------SEREALMSELKMMTQLGSHEN 110 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------------CHHHHHHHHHHHHHCCCTT
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH-------------HHHHHHHHHHHHHHhhcCCCC
Confidence 47899999999999999999976 24668999999653221 1246899999999999 8999
Q ss_pred eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC---------------------CCCCHHHHHHHHHHHHHHHHHhhc
Q 039419 758 IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD---------------------SCLEWELRYRIILGAAQGLAYLHH 816 (1035)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~~L~~LH~ 816 (1035)
|+++++++.+.+..|+||||+++|+|.+++..... ..+++..+..++.||++||+|||+
T Consensus 111 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 190 (344)
T 1rjb_A 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190 (344)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999976543 237899999999999999999999
Q ss_pred cCCCCeeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHH
Q 039419 817 DCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEV 896 (1035)
Q Consensus 817 ~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~el 896 (1035)
. ||+||||||+||+++.++.+||+|||+++...............||+.|+|||+..+..++.++||||||+++|||
T Consensus 191 ~---~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el 267 (344)
T 1rjb_A 191 K---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267 (344)
T ss_dssp T---TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred C---CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHH
Confidence 9 9999999999999999999999999999876554433333455678899999999888999999999999999999
Q ss_pred Hh-CCCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 897 LT-GKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 897 lt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
++ |..||...... ......+.... ........+ ..+..++.+||+.||++||++.+++++|+.+..
T Consensus 268 ~t~g~~p~~~~~~~-~~~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 268 FSLGVNPYPGIPVD-ANFYKLIQNGF------KMDQPFYAT------EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp TTTSCCSSTTCCCS-HHHHHHHHTTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HcCCCCCcccCCcH-HHHHHHHhcCC------CCCCCCCCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 98 99999765332 12222222110 000111111 223457888999999999999999999988754
Q ss_pred hH
Q 039419 976 ER 977 (1035)
Q Consensus 976 ~~ 977 (1035)
..
T Consensus 335 ~~ 336 (344)
T 1rjb_A 335 DA 336 (344)
T ss_dssp --
T ss_pred HH
Confidence 43
No 95
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.8e-38 Score=352.29 Aligned_cols=266 Identities=21% Similarity=0.305 Sum_probs=201.3
Q ss_pred HHhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
+.++|...+.||+|+||+||+|++.+++.||+|++....... ...+.+.+|+.++++++||||+++++
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hp~iv~~~~ 86 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE------------GIPSTAIREISLLKELHHPNIVSLID 86 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------------------CHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccc------------hhhHHHHHHHHHHHHcCCCCEeeeee
Confidence 457899999999999999999999889999999996543211 23567899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+++..++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~ 161 (311)
T 3niz_A 87 VIHSERCLTLVFEFME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLA 161 (311)
T ss_dssp EECCSSCEEEEEECCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEccCCEEEEEEcCCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEc
Confidence 9999999999999997 58888876543 3489999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|||+++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ...........
T Consensus 162 Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~ 238 (311)
T 3niz_A 162 DFGLARAFGIPV--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGT 238 (311)
T ss_dssp CCTTCEETTSCC--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCC
T ss_pred cCcCceecCCCc--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCC
Confidence 999998764332 22334578999999998765 568999999999999999999999997654332 11111111100
Q ss_pred ch-hhh----------cccccCCCcccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 923 AI-EVL----------DKSLRARPEVEIE-----EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 923 ~~-~~~----------~~~~~~~~~~~~~-----~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. ... ............. ......+++.+||++||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 239 PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 000 0000000000000 01234568889999999999999999874
No 96
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.1e-39 Score=359.29 Aligned_cols=254 Identities=20% Similarity=0.315 Sum_probs=197.4
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
..++|...+.||+|+||.||+|++. +++.||||++...... ...+.+.+|+.++++++||||++++
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hpniv~~~ 70 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE-------------LAREKVMREVKALAKLEHPGIVRYF 70 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTT-------------THHHHHHHHHHHHTSCCCTTBCCEE
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCch-------------hHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 4578999999999999999999886 6999999999643211 2357899999999999999999999
Q ss_pred eEEEcCC---------------------------------------------------------cceEEEEeCCCCChhh
Q 039419 763 GCCWNRN---------------------------------------------------------TRLLMYDYMPNGSLGS 785 (1035)
Q Consensus 763 ~~~~~~~---------------------------------------------------------~~~lv~e~~~~gsL~~ 785 (1035)
+++.+.. ..++||||+++|+|.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 150 (332)
T 3qd2_B 71 NAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKD 150 (332)
T ss_dssp EEEEECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHH
T ss_pred EEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHH
Confidence 9986543 2789999999999999
Q ss_pred hhhhcCC-CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeeccCccccccCCcc-------
Q 039419 786 LLHERRD-SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFA------- 857 (1035)
Q Consensus 786 ~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~------- 857 (1035)
++..... ...++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 151 ~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~ 227 (332)
T 3qd2_B 151 WMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 227 (332)
T ss_dssp HHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC----------
T ss_pred HHhcccCccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccc
Confidence 9976543 3356677899999999999999999 9999999999999999999999999999876554211
Q ss_pred ---ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccchhhhcccccCC
Q 039419 858 ---RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRAR 934 (1035)
Q Consensus 858 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (1035)
.......||+.|+|||+..+..++.++|||||||++|||++|..|+.. ......... .. ..
T Consensus 228 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------~~~~~~~~~------~~---~~ 291 (332)
T 3qd2_B 228 PAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------RVRIITDVR------NL---KF 291 (332)
T ss_dssp ----CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------HHHHHHHHH------TT---CC
T ss_pred cccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------HHHHHHHhh------cc---CC
Confidence 122346799999999999998999999999999999999998766421 111111100 00 11
Q ss_pred CcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 935 PEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 935 ~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
+...........+++.+||++||++||+++|++++
T Consensus 292 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 11111222334568889999999999999999874
No 97
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.6e-39 Score=349.87 Aligned_cols=260 Identities=23% Similarity=0.356 Sum_probs=196.0
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC----CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN----GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
.++|...+.||+|+||.||+|.+.. +..||+|++...... ...+.+.+|+.++++++||||++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~iv~ 80 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-------------SVREKFLQEALTMRQFDHPHIVK 80 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSH-------------HHHHHHHHHHHHHHTCCCTTBCC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCH-------------HHHHHHHHHHHHHHhCCCCccce
Confidence 3678899999999999999997753 457999998653221 23567999999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++ .++..|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 81 ~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 155 (281)
T 1mp8_A 81 LIGVI-TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 155 (281)
T ss_dssp EEEEE-CSSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred EEEEE-ccCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCE
Confidence 99997 4567899999999999999997653 3489999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|||+++....... .......+|+.|+|||+..+..++.++||||||+++|||++ |..||...... .....+..
T Consensus 156 kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~~ 232 (281)
T 1mp8_A 156 KLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIEN 232 (281)
T ss_dssp EECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHT
T ss_pred EECccccccccCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHHc
Confidence 9999999987654332 12234567889999999988899999999999999999997 99999754332 22222221
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
... .......+ ..+..++.+||+.||++||++.|+++.|+++..+.
T Consensus 233 ~~~------~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 233 GER------LPMPPNCP------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp TCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCC------CCCCCCCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 110 00111111 12345788899999999999999999999986654
No 98
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.1e-38 Score=354.99 Aligned_cols=263 Identities=27% Similarity=0.395 Sum_probs=211.7
Q ss_pred HhccccCCeeeeeCCcEEEEEEE------CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCc
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM------ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKN 757 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpn 757 (1035)
.++|...+.||+|+||.||+|++ .+++.||||++....... ..+.+.+|+.+++++ +|||
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~~h~~ 88 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-------------EREALMSELKVLSYLGNHMN 88 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH-------------HHHHHHHHHHHHHHHCCCTT
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHH-------------HHHHHHHHHHHHhhcccCCC
Confidence 36788999999999999999975 246889999997543221 246799999999999 8999
Q ss_pred eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCC----------------CCCHHHHHHHHHHHHHHHHHhhccCCCC
Q 039419 758 IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDS----------------CLEWELRYRIILGAAQGLAYLHHDCVPP 821 (1035)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 821 (1035)
|+++++++.+.+..++||||+++|+|.+++...... .+++..+..++.|+++||+|||+. +
T Consensus 89 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ 165 (313)
T 1t46_A 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---N 165 (313)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred eeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---C
Confidence 999999999999999999999999999999865432 489999999999999999999999 9
Q ss_pred eeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 039419 822 IVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GK 900 (1035)
Q Consensus 822 ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~ 900 (1035)
|+||||||+||+++.++.+||+|||+++...............||+.|+|||+..+..++.++||||||+++|||++ |+
T Consensus 166 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 245 (313)
T 1t46_A 166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245 (313)
T ss_dssp CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred eecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999987655443333345567889999999988899999999999999999999 99
Q ss_pred CCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 901 QPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 901 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
.||...... ......+.... ........+ ..+..++.+||++||++||++.|++++|+++...
T Consensus 246 ~p~~~~~~~-~~~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 246 SPYPGMPVD-SKFYKMIKEGF------RMLSPEHAP------AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp CSSTTCCSS-HHHHHHHHHTC------CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcccch-hHHHHHhccCC------CCCCcccCC------HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 999765332 11222221110 011111111 1234578889999999999999999999887643
No 99
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.5e-39 Score=360.76 Aligned_cols=266 Identities=25% Similarity=0.377 Sum_probs=211.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC------CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCc
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN------GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKN 757 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpn 757 (1035)
.++|...+.||+|+||.||+|.+.. ...||+|++....... ..+.+.+|+.+++++ +|||
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~~h~~ 111 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD-------------EKEALMSELKIMSHLGQHEN 111 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHH-------------HHHHHHHHHHHHHHHCCCTT
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChH-------------HHHHHHHHHHHHHhhcCCCC
Confidence 3678899999999999999998753 2479999996543221 256799999999999 8999
Q ss_pred eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcC------------CCCCCHHHHHHHHHHHHHHHHHhhccCCCCeecc
Q 039419 758 IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERR------------DSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHR 825 (1035)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHr 825 (1035)
|+++++++.+.+..|+||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||
T Consensus 112 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~ 188 (333)
T 2i1m_A 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHR 188 (333)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred eeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccC
Confidence 9999999999999999999999999999997643 23478999999999999999999999 99999
Q ss_pred CCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 039419 826 DIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPID 904 (1035)
Q Consensus 826 Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~ 904 (1035)
||||+||+++.++.+||+|||+++...............||+.|+|||+..+..++.++||||||+++|||++ |..||.
T Consensus 189 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 268 (333)
T 2i1m_A 189 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 268 (333)
T ss_dssp CCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999999987655433333345567889999999888899999999999999999999 999997
Q ss_pred CCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHH
Q 039419 905 PTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREE 979 (1035)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 979 (1035)
...... .....+.... ........+ ..+..++.+||+.||++||++.|++++|+++..+.+.
T Consensus 269 ~~~~~~-~~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 330 (333)
T 2i1m_A 269 GILVNS-KFYKLVKDGY------QMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330 (333)
T ss_dssp TCCSSH-HHHHHHHHTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ccchhH-HHHHHHhcCC------CCCCCCCCC------HHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence 543321 1222222111 000011111 1234578889999999999999999999998765443
No 100
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.7e-39 Score=378.22 Aligned_cols=256 Identities=23% Similarity=0.414 Sum_probs=206.8
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
.++|...+.||+|+||+||+|.+.+++.||||++..... ..+.|.+|+.++++++||||++++++
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~h~~iv~l~~~ 251 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---------------SVEAFLAEANVMKTLQHDKLVKLHAV 251 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB---------------CHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc---------------cHHHHHHHHHHHhhCCCCCEeeEEEE
Confidence 357888899999999999999998899999999965321 25689999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+. .+..|+||||+++|+|.++++......+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 252 ~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 327 (454)
T 1qcf_A 252 VT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIAD 327 (454)
T ss_dssp EC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECS
T ss_pred Ee-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEee
Confidence 86 56789999999999999999865444588999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||+++....... .......++..|+|||++....++.++|||||||++|||++ |+.||..... ......+...
T Consensus 328 FG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~--- 401 (454)
T 1qcf_A 328 FGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERG--- 401 (454)
T ss_dssp TTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHHT---
T ss_pred CCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcC---
Confidence 999987644321 22234557889999999988899999999999999999999 9999975422 1222222111
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
.+...+..+. ..+..++.+||+.||++|||+++|++.|+++.
T Consensus 402 -------~~~~~~~~~~--~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 402 -------YRMPRPENCP--EELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp -------CCCCCCTTSC--HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred -------CCCCCCCCCC--HHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 1111111111 22455788899999999999999999998763
No 101
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.8e-38 Score=347.99 Aligned_cols=264 Identities=17% Similarity=0.189 Sum_probs=208.4
Q ss_pred hccccCCeeeeeCCcEEEEEEE-CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEM-ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~ 763 (1035)
++|...+.||+|+||.||+|.+ .+++.||||++..... .+.+.+|+.+++++ +|+|++++++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------------~~~~~~e~~~~~~l~~~~~i~~~~~ 73 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----------------APQLRDEYRTYKLLAGCTGIPNVYY 73 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----------------SCCHHHHHHHHHHTTTCTTCCCEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----------------cHHHHHHHHHHHHHhcCCCCCeEEe
Confidence 5688999999999999999976 4689999999854321 23578899999999 7999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc----
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE---- 839 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~---- 839 (1035)
++.+....++||||+ +++|.+++...+ ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.
T Consensus 74 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~ 148 (298)
T 1csn_A 74 FGQEGLHNVLVIDLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNAN 148 (298)
T ss_dssp EEEETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTT
T ss_pred ecCCCceeEEEEEec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCC
Confidence 999999999999999 999999998653 3489999999999999999999999 9999999999999987776
Q ss_pred -eEEeeccCccccccCCcc-----ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch-h
Q 039419 840 -PYIADFGLAKLVVEGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL-H 912 (1035)
Q Consensus 840 -~kl~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~-~ 912 (1035)
+||+|||+++........ .......||+.|+|||+..+..++.++||||||+++|||++|+.||........ .
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 228 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 228 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH
Confidence 999999999876554321 123456799999999999998999999999999999999999999986543221 1
Q ss_pred HHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 913 IVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
....+..... ...........+ ..+..++.+||+.||++||+++++++.|+++.....
T Consensus 229 ~~~~~~~~~~--~~~~~~~~~~~~------~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 229 KYERIGEKKQ--STPLRELCAGFP------EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHHHHHHHHH--HSCHHHHTTTSC------HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhcc--CccHHHHHhhCc------HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 1111111100 000001111111 123457788999999999999999999999876543
No 102
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.9e-39 Score=359.00 Aligned_cols=263 Identities=25% Similarity=0.369 Sum_probs=210.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC--------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CC
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME--------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RH 755 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 755 (1035)
.++|...+.||+|+||.||+|++. +++.||||++....... ..+.+.+|+.+++++ +|
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~~h 100 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-------------DLSDLVSEMEMMKMIGKH 100 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHH-------------HHHHHHHHHHHHHHHCCC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHH-------------HHHHHHHHHHHHHHhhcC
Confidence 367899999999999999999863 46789999996543211 246789999999999 89
Q ss_pred CceeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhccCCCC
Q 039419 756 KNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD--------------SCLEWELRYRIILGAAQGLAYLHHDCVPP 821 (1035)
Q Consensus 756 pniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 821 (1035)
|||+++++++.+.+..|+||||+++|+|.+++..... ..+++..+..++.||++||+|||+. +
T Consensus 101 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ 177 (334)
T 2pvf_A 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---K 177 (334)
T ss_dssp TTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred CCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 9999999999999999999999999999999976542 2488999999999999999999999 9
Q ss_pred eeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CC
Q 039419 822 IVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GK 900 (1035)
Q Consensus 822 ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~ 900 (1035)
|+||||||+||+++.++.+||+|||+++...............+|+.|+|||+..+..++.++||||||+++|||++ |+
T Consensus 178 ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 257 (334)
T 2pvf_A 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257 (334)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred eeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999987655443333445568899999999888889999999999999999999 99
Q ss_pred CCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 901 QPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 901 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
.||..... ......+.... ........+ ..+..++.+||+.||++||++.|+++.|+.+....
T Consensus 258 ~p~~~~~~--~~~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 258 SPYPGIPV--EELFKLLKEGH------RMDKPANCT------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp CSSTTCCH--HHHHHHHHHTC------CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCcCcCCH--HHHHHHHhcCC------CCCCCccCC------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 99975421 11222221111 000111111 12345788899999999999999999999986543
No 103
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.8e-39 Score=358.37 Aligned_cols=263 Identities=22% Similarity=0.378 Sum_probs=192.8
Q ss_pred hccccCCeeeeeCCcEEEEEEECCC----cEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENG----EVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
++|...+.||+|+||+||+|.+... ..||||++....... ...+.+.+|++++++++||||+++
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~ 90 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS------------SDIEEFLREAACMKEFDHPHVAKL 90 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C------------HHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH------------HHHHHHHHHHHHHHHCCCCceehh
Confidence 5788999999999999999977643 279999996543222 125689999999999999999999
Q ss_pred EeEEEcCCcc------eEEEEeCCCCChhhhhhhcCC----CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCccc
Q 039419 762 LGCCWNRNTR------LLMYDYMPNGSLGSLLHERRD----SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANN 831 (1035)
Q Consensus 762 ~~~~~~~~~~------~lv~e~~~~gsL~~~l~~~~~----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~N 831 (1035)
++++...+.. ++||||+++|+|.+++..... ..+++..+..++.|+++||+|||+. ||+||||||+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~N 167 (323)
T 3qup_A 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARN 167 (323)
T ss_dssp CEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred hceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcce
Confidence 9999887655 999999999999999975432 2489999999999999999999999 99999999999
Q ss_pred EEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCc
Q 039419 832 ILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEG 910 (1035)
Q Consensus 832 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~ 910 (1035)
|+++.++.+||+|||+++...............+++.|+|||...+..++.++|||||||++|||++ |+.||......
T Consensus 168 Ili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~- 246 (323)
T 3qup_A 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA- 246 (323)
T ss_dssp EEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-
T ss_pred EEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-
Confidence 9999999999999999987755544333445567889999999998899999999999999999999 99999754322
Q ss_pred hhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 911 LHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
.....+.... ....+.. ....+.+++.+||+.||++||++.++++.|+++....
T Consensus 247 -~~~~~~~~~~---------~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 247 -EIYNYLIGGN---------RLKQPPE---CMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp -GHHHHHHTTC---------CCCCCTT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -HHHHHHhcCC---------CCCCCCc---cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 2222211110 0001111 1123456788899999999999999999999986543
No 104
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.2e-39 Score=358.64 Aligned_cols=252 Identities=21% Similarity=0.293 Sum_probs=192.3
Q ss_pred hccccCCeeeeeCCcEEEEEEE----CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEM----ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
++|...+.||+|+||.||+|+. .+++.||+|++......... .....+.+|+.++++++||||+++
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~hp~iv~~ 86 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA----------KDTAHTKAERNILEEVKHPFIVDL 86 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------------HHHHHHHCCCTTBCCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhh----------hHHHHHHHHHHHHHhCCCCCccce
Confidence 6799999999999999999987 46899999999764322110 124567899999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++++.+.+..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. ||+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 87 IYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp EEEEECSSCEEEEEECCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred eEEEEcCCEEEEEEeCCCCCcHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 9999999999999999999999999987654 88999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhc
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKR 921 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 921 (1035)
|+|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+....
T Consensus 162 l~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~ 237 (327)
T 3a62_A 162 LTDFGLCKESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--KKTIDKILKCK 237 (327)
T ss_dssp ECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTC
T ss_pred EEeCCcccccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCC
Confidence 99999998643322 123356799999999999888999999999999999999999999975421 11111111100
Q ss_pred cchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039419 922 GAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRP-----TMKDVAAM 969 (1035)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RP-----s~~el~~~ 969 (1035)
.......+ ....+++.+||+.||++|| ++.|++++
T Consensus 238 -------~~~p~~~~------~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 -------LNLPPYLT------QEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -------CCCCTTSC------HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -------CCCCCCCC------HHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 01111111 1234577889999999999 77788774
No 105
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.7e-38 Score=370.77 Aligned_cols=252 Identities=26% Similarity=0.387 Sum_probs=205.1
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+.++++++||||+++++++
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----------------~~~~~~~E~~~l~~l~h~niv~~~~~~ 255 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----------------TAQAFLAEASVMTQLRHSNLVQLLGVI 255 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----------------TSHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----------------HHHHHHHHHHHHHhccCCCEEEEEEEE
Confidence 57888899999999999999887 7899999996532 145799999999999999999999998
Q ss_pred EcCC-cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 766 WNRN-TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 766 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
.+.+ ..|+||||+++|+|.++++..+...+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 256 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 332 (450)
T 1k9a_A 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 332 (450)
T ss_dssp ECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECC
T ss_pred EcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEee
Confidence 7765 789999999999999999887666689999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||+++..... .....++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+...
T Consensus 333 fG~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~--- 402 (450)
T 1k9a_A 333 FGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKG--- 402 (450)
T ss_dssp CTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTT---
T ss_pred CCCccccccc-----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC---
Confidence 9999854321 123467889999999999999999999999999999998 99999765332 222222211
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
.+...+..+ ...+.+++.+||+.||++|||+.++++.|+++...
T Consensus 403 -------~~~~~p~~~--~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 403 -------YKMDAPDGC--PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp -------CCCCCCTTC--CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -------CCCCCCCcC--CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 011111111 12334578889999999999999999999988643
No 106
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.8e-38 Score=346.46 Aligned_cols=256 Identities=27% Similarity=0.352 Sum_probs=207.0
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
..++|...+.||+|+||.||+|.+. +++.||||++...... ...+.+.+|+.+++.++||||++++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~ 71 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-------------DCPENIKKEICINKMLNHENVVKFY 71 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-------------THHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-------------hhhHHHHHHHHHHHhcCCCCceeee
Confidence 4678999999999999999999876 6899999998643221 1256789999999999999999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+.+..|+||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 146 (276)
T 2yex_A 72 GHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKI 146 (276)
T ss_dssp EEEEETTEEEEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred eEEEcCCEEEEEEEecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEE
Confidence 99999999999999999999999997543 489999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKR 921 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 921 (1035)
+|||.+................||+.|+|||+..+..+ +.++||||||+++|||++|+.||............|.....
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 226 (276)
T 2yex_A 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226 (276)
T ss_dssp CCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT
T ss_pred eeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc
Confidence 99999987654433333446679999999999887665 67899999999999999999999866544333333322110
Q ss_pred cchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 922 GAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. .+..... ....+++.+||+.||++||+++|++++
T Consensus 227 ----~~------~~~~~~~--~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 227 ----YL------NPWKKID--SAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ----TS------TTGGGSC--HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----cc------CchhhcC--HHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 00 0000111 123457888999999999999999773
No 107
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5e-39 Score=357.17 Aligned_cols=257 Identities=23% Similarity=0.328 Sum_probs=193.1
Q ss_pred HhccccCCeeeeeCCcEEEEEEE-CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM-ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|.+.+.||+|+||.||+|++ .+++.||||++........ ...+.+.+|+.++++++||||+++++
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hp~iv~~~~ 79 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP-----------SFYLRFRREAQNAAALNHPAIVAVYD 79 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSH-----------HHHHHHHHHHTTCCCCCCTTBCCEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCH-----------HHHHHHHHHHHHHHcCCCCCcceEEE
Confidence 46799999999999999999987 4689999999976433222 23567899999999999999999999
Q ss_pred EEEcCCcc----eEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc
Q 039419 764 CCWNRNTR----LLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE 839 (1035)
Q Consensus 764 ~~~~~~~~----~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~ 839 (1035)
++...... |+||||++|++|.++++..+. +++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 154 (311)
T 3ork_A 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNA 154 (311)
T ss_dssp EEEEEETTEEEEEEEEECCCEEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSC
T ss_pred eeeccCCCCcccEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCC
Confidence 99876544 999999999999999987654 89999999999999999999999 9999999999999999999
Q ss_pred eEEeeccCccccccCCcc-ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
+||+|||+++........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||....+... ......
T Consensus 155 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~ 233 (311)
T 3ork_A 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVR 233 (311)
T ss_dssp EEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH
T ss_pred EEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhc
Confidence 999999999876543221 223346799999999999998999999999999999999999999975432111 011111
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAA 968 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~ 968 (1035)
... ..........+ ..+..++.+||++||++||++.++++
T Consensus 234 ~~~----~~~~~~~~~~~------~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 234 EDP----IPPSARHEGLS------ADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCC----CCHHHHSTTCC------HHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCC----CCcccccCCCC------HHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 000 00000011111 12345788899999999997776655
No 108
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=9.3e-39 Score=352.29 Aligned_cols=268 Identities=27% Similarity=0.407 Sum_probs=201.3
Q ss_pred hccccCCeeeeeCCcEEEEEEE-----CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEM-----ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
++|+..+.||+|+||+||+|++ .+++.||||++..... ...+.+.+|+.++++++||||++
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv~ 75 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE--------------EHLRDFEREIEILKSLQHDNIVK 75 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCH--------------HHHHHHHHHHHHHHTCCCTTBCC
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCH--------------HHHHHHHHHHHHHHhCCCCCEee
Confidence 6788999999999999999984 2589999999864321 12467899999999999999999
Q ss_pred EEeEEEcC--CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 761 FLGCCWNR--NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 761 l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
+++++... ...++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 76 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~ 151 (295)
T 3ugc_A 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENEN 151 (295)
T ss_dssp EEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGG-GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETT
T ss_pred EEEEEecCCCCceEEEEEeCCCCCHHHHHHhccc-ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCC
Confidence 99998654 468999999999999999976542 489999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCccccccCCc-cccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
.+||+|||+++....... ........++..|+|||+..+..++.++||||||+++|||++|..||..... ....+.
T Consensus 152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~---~~~~~~ 228 (295)
T 3ugc_A 152 RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMI 228 (295)
T ss_dssp EEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH---HHHHHH
T ss_pred eEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChH---HHHhhh
Confidence 999999999987654322 1223345678889999999988999999999999999999999999864211 000000
Q ss_pred HHhcc-------chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 918 RQKRG-------AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 918 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
..... ..+.+........+... ...+..++.+||+.||++|||++|+++.|+++...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 229 GNDKQGQMIVFHLIELLKNNGRLPRPDGC--PDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCCCCCCTTC--CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCccccchhHHHHHHHHhccCcCCCCcCc--CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 00000 00011111111111111 12345578889999999999999999999998653
No 109
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=357.00 Aligned_cols=262 Identities=26% Similarity=0.403 Sum_probs=199.0
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcE----EEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEV----IAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
++|...+.||+|+||+||+|.+. +++. ||+|.+...... ...+.+.+|+.++++++||||++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hp~iv~ 81 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-------------KANKEILDEAYVMASVDNPHVCR 81 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSC-------------CCHHHHHHHHHHHTTCCBTTBCC
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCH-------------HHHHHHHHHHHHHHhCCCCCeeE
Confidence 56889999999999999999765 3444 577766432211 23578999999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++.... .++||||+.+|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~ 156 (327)
T 3lzb_A 82 LLGICLTST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp CCEEEESSS-EEEEECCCSSCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEE
T ss_pred EEEEEecCC-ceEEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCE
Confidence 999998765 7899999999999999986543 489999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+..
T Consensus 157 kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~ 234 (327)
T 3lzb_A 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEK 234 (327)
T ss_dssp EECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHT
T ss_pred EEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHc
Confidence 9999999987655443333345567889999999999999999999999999999999 99999765332 22222221
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREE 979 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 979 (1035)
... . ..+.. ....+..++.+||+.||++||++.|+++.|+.+......
T Consensus 235 ~~~--------~-~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 282 (327)
T 3lzb_A 235 GER--------L-PQPPI---CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR 282 (327)
T ss_dssp TCC--------C-CCCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHH
T ss_pred CCC--------C-CCCcc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCc
Confidence 110 0 00111 111245578889999999999999999999998765543
No 110
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-38 Score=346.09 Aligned_cols=256 Identities=24% Similarity=0.427 Sum_probs=208.2
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---------------~~~~~~~e~~~l~~l~h~~i~~~~~~~ 72 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------------SEEDFIEEAEVMMKLSHPKLVQLYGVC 72 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---------------CHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---------------CHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 56888899999999999999998899999999965322 235789999999999999999999999
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
.+++..++||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 73 ~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~df 148 (267)
T 3t9t_A 73 LEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDF 148 (267)
T ss_dssp CSSSSCEEEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCT
T ss_pred ccCCCeEEEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccc
Confidence 99999999999999999999997653 3489999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccch
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
|.++....... .......|++.|+|||+..+..++.++||||||+++|||++ |+.||...... .....+...
T Consensus 149 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~---- 221 (267)
T 3t9t_A 149 GMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTG---- 221 (267)
T ss_dssp TGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTT----
T ss_pred ccccccccccc-cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcC----
Confidence 99987644221 22234567889999999988889999999999999999999 89999754211 111111110
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
.........+ ..+.+++.+||+.||++||++++++++|+++..
T Consensus 222 --~~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 222 --FRLYKPRLAS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp --CCCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CcCCCCccCc------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0000011111 223457888999999999999999999998864
No 111
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.8e-39 Score=348.20 Aligned_cols=254 Identities=21% Similarity=0.313 Sum_probs=202.9
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
.++|...+.||+|+||+||+|++. ++.||||++........ ..+.+.+|+.++++++||||++++++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~------------~~~~~~~E~~~l~~l~h~~iv~~~~~ 75 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTR------------KSRDFNEECPRLRIFSHPNVLPVLGA 75 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHH------------HHHHHHHHGGGGCCCSCTTEECEEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHH------------HHHHHHHHHHHHHhcCCCchhheEEE
Confidence 357888999999999999999986 88999999976432221 24679999999999999999999999
Q ss_pred EEcC--CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCC--eeccCCCcccEEEcCCCce
Q 039419 765 CWNR--NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPP--IVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 765 ~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivHrDikp~NIll~~~~~~ 840 (1035)
+.+. +..++||||+++|+|.++++......+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~ 152 (271)
T 3kmu_A 76 CQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTA 152 (271)
T ss_dssp ECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCE
T ss_pred EccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcce
Confidence 9887 7789999999999999999877655689999999999999999999998 7 9999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCc---cccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITE---KSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+|+|||++.... .....||+.|+|||++.+..++. ++||||||+++|||++|+.||...... .....+
T Consensus 153 ~l~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~ 223 (271)
T 3kmu_A 153 RISMADVKFSFQ-------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--EIGMKV 223 (271)
T ss_dssp EEEGGGSCCTTS-------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--HHHHHH
T ss_pred eEEeccceeeec-------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--HHHHHH
Confidence 999998875422 22457899999999987655444 799999999999999999999754221 111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
... ..........+ ..+..++.+||+.||++|||++++++.|+++.
T Consensus 224 ~~~-----~~~~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 224 ALE-----GLRPTIPPGIS------PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp HHS-----CCCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred Hhc-----CCCCCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 000 00111111111 12345778899999999999999999998874
No 112
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.5e-38 Score=348.29 Aligned_cols=265 Identities=21% Similarity=0.272 Sum_probs=199.1
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|+..+.||+|+||+||+|.+. +++.||||++....... ...+.+.+|+.++++++||||++++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~~~ 69 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE------------GVPSSALREICLLKELKHKNIVRLHDV 69 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST------------THHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcC------------CcchHHHHHHHHHhcCCCCCEeeEEeE
Confidence 57889999999999999999876 58999999996543221 235678899999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+++..++||||+++ ++.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 70 ~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~D 144 (292)
T 3o0g_A 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLAN 144 (292)
T ss_dssp EEETTEEEEEEECCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred EEeCCEEEEEEecCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 9999999999999975 6666665432 3489999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCC-CCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMK-ITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||.++...... .......||+.|+|||+..+.. ++.++||||+||++|||++|..||..............+.....
T Consensus 145 fg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~ 222 (292)
T 3o0g_A 145 FGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222 (292)
T ss_dssp CTTCEECCSCC--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCC
T ss_pred cccceecCCcc--ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 99998764332 2234567899999999987665 79999999999999999999988654332222222222111110
Q ss_pred h-hhh---ccc--ccC---------CCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 I-EVL---DKS--LRA---------RPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~-~~~---~~~--~~~---------~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. +.. ... ... .............+++.+||+.||++|||++|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 000 000 000 000000011233467888999999999999999874
No 113
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.5e-39 Score=373.09 Aligned_cols=250 Identities=24% Similarity=0.387 Sum_probs=202.8
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
+.|...+.||+|+||.||+|++. +|+.||||++........ ...+.+.+|+.+++.++||||++++++
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~-----------~~~~~~~~Ei~~l~~l~HpnIv~l~~~ 84 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSL-----------DVVGKIRREIQNLKLFRHPHIIKLYQV 84 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHT-----------TTHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH-----------HHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 57889999999999999999876 699999999964322111 235678999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||++||+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 85 ~~~~~~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~D 159 (476)
T 2y94_A 85 ISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIAD 159 (476)
T ss_dssp EECSSEEEEEEECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred EEECCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEe
Confidence 999999999999999999999997654 389999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||+++....... ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .....+...
T Consensus 160 FG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~--- 231 (476)
T 2y94_A 160 FGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFKKICDG--- 231 (476)
T ss_dssp CSSCEECCTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHHHHHTT---
T ss_pred ccchhhcccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHHHHhcC---
Confidence 999987654332 235679999999999887765 68999999999999999999999754221 111111110
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. ..+.. + ...+.+++.+||+.||++|||++|++++
T Consensus 232 ------~~-~~p~~-~--s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 232 ------IF-YTPQY-L--NPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ------CC-CCCTT-C--CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ------Cc-CCCcc-C--CHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 00 01110 1 1123557888999999999999999984
No 114
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.5e-38 Score=363.20 Aligned_cols=208 Identities=22% Similarity=0.285 Sum_probs=180.1
Q ss_pred HhccccCCeeeee--CCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 685 LKCLVEDSVVGKG--CSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 685 ~~~~~~~~~iG~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.++|++.+.||+| +||+||+|++. +++.||||++....... ...+.+.+|+.++++++|||||++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~~ 91 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN------------EMVTFLQGELHVSKLFNHPNIVPY 91 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH------------HHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh------------HHHHHHHHHHHHHHhCCCCCCCcE
Confidence 3679999999999 99999999876 58999999996543221 235678899999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++++.+.+..|+||||+++|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 92 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~k 168 (389)
T 3gni_B 92 RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVY 168 (389)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEE
T ss_pred eEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEE
Confidence 99999999999999999999999999877555699999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccCCc-----cccccccCCcccccCCccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 039419 842 IADFGLAKLVVEGDF-----ARSSNTVAGSYGYIAPEYGYM--MKITEKSDVYSYGVVVLEVLTGKQPIDPTI 907 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGvvl~elltg~~P~~~~~ 907 (1035)
|+|||.+........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 169 l~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp ECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred EcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 999999875533221 112234579999999999877 679999999999999999999999997643
No 115
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.1e-39 Score=366.25 Aligned_cols=255 Identities=18% Similarity=0.207 Sum_probs=200.4
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||+||+|+++ +++.||+|++........ ...+.+.+|+.+++.++|||||+++++
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~-----------~~~~~~~~E~~il~~l~hp~Iv~l~~~ 137 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR-----------SDSAFFWEERDIMAFANSPWVVQLFYA 137 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-----------CCCSTHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhh-----------HHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 67999999999999999999876 488999999864322111 123458899999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||++||+|.++++... +++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|
T Consensus 138 ~~~~~~~~lV~E~~~gg~L~~~l~~~~---~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 211 (410)
T 3v8s_A 138 FQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 211 (410)
T ss_dssp EECSSEEEEEECCCTTEEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred EEECCEEEEEEeCCCCCcHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEec
Confidence 999999999999999999999997643 89999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCC----CCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHh
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMK----ITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQK 920 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 920 (1035)
||+|+....... ......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .....+...
T Consensus 212 FG~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~ 288 (410)
T 3v8s_A 212 FGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKIMNH 288 (410)
T ss_dssp CTTCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTH
T ss_pred cceeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--hHHHHHHhc
Confidence 999987654332 1234678999999999987655 788999999999999999999999754221 111111110
Q ss_pred ccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 039419 921 RGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDD--RPTMKDVAAM 969 (1035)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~--RPs~~el~~~ 969 (1035)
...+........+ ..+.+++.+|+..+|++ ||+++|++++
T Consensus 289 ---~~~~~~p~~~~~s------~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 289 ---KNSLTFPDDNDIS------KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---HHHCCCCTTCCCC------HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---cccccCCCccccc------HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0000000000111 12345677899989988 9999999885
No 116
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.9e-39 Score=348.23 Aligned_cols=257 Identities=28% Similarity=0.430 Sum_probs=191.4
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||.||+|.+. ++.||||++........ ....+.+.+|+.+++.++||||+++++++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 75 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDI----------SQTIENVRQEAKLFAMLKHPNIIALRGVC 75 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC--------------------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccH----------HHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 57888999999999999999886 89999999865432221 12356899999999999999999999999
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC--------C
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP--------E 837 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~--------~ 837 (1035)
.+++..++||||+++++|.+++... .+++..+..++.|+++||+|||+.+..+|+||||||+||+++. +
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~ 152 (271)
T 3dtc_A 76 LKEPNLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSN 152 (271)
T ss_dssp CCC--CEEEEECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSS
T ss_pred ecCCceEEEEEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccC
Confidence 9999999999999999999998643 3899999999999999999999993223999999999999986 7
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+.+||+|||.++...... .....||+.|+|||+..+..++.++||||||+++|||++|+.||...... .....+
T Consensus 153 ~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~ 226 (271)
T 3dtc_A 153 KILKITDFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL--AVAYGV 226 (271)
T ss_dssp CCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHH
T ss_pred cceEEccCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHhh
Confidence 789999999998654432 22457999999999998889999999999999999999999999754211 111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEI 973 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~ 973 (1035)
.... .........+ ....+++.+||+.||++||++.|++++|+.+
T Consensus 227 ~~~~-----~~~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 227 AMNK-----LALPIPSTCP------EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HTSC-----CCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hcCC-----CCCCCCcccC------HHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1000 0001111111 1234578889999999999999999998753
No 117
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.2e-38 Score=347.85 Aligned_cols=264 Identities=23% Similarity=0.303 Sum_probs=197.4
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||+||+|++.+++.||+|++....... ...+.+.+|+.++++++||||+++++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 69 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE------------GIPSTTIREISILKELKHSNIVKLYDVI 69 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG------------CCCHHHHHHHHGGGGCCCTTBCCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccccc------------ccchhHHHHHHHHHhcCCCCEeeeeeEE
Confidence 5688999999999999999988889999999996543221 1246788999999999999999999999
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
.+.+..|+||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 70 ~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 144 (288)
T 1ob3_A 70 HTKKRLVLVFEHLDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADF 144 (288)
T ss_dssp ECSSCEEEEEECCSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCT
T ss_pred ccCCeEEEEEEecCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeEC
Confidence 999999999999975 9999887643 3489999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc-
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA- 923 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~- 923 (1035)
|+++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .......+.....
T Consensus 145 g~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~ 221 (288)
T 1ob3_A 145 GLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPN 221 (288)
T ss_dssp THHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCC
T ss_pred ccccccCccc--cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCC
Confidence 9998664322 12234578999999999865 45899999999999999999999999754221 1111111110000
Q ss_pred h---------hhhcccccCCCccc-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 I---------EVLDKSLRARPEVE-----IEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~---------~~~~~~~~~~~~~~-----~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. ...++......+.. ........+++.+||+.||++|||++|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 00000000000000 0001223468888999999999999999874
No 118
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=349.50 Aligned_cols=256 Identities=27% Similarity=0.429 Sum_probs=196.6
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||+||+|++. ++.||||++... ...+.|.+|+.++++++||||+++++++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----------------~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 70 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----------------SERKAFIVELRQLSRVNHPNIVKLYGAC 70 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----------------THHHHHHHHHHHHHHCCCTTBCCEEEBC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----------------hHHHHHHHHHHHHhcCCCCCcCeEEEEE
Confidence 57888999999999999999886 788999998532 1246799999999999999999999987
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc-eEEe
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRD-SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE-PYIA 843 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~-~kl~ 843 (1035)
. +..++||||+++|+|.+++..... ..+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+
T Consensus 71 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~ 148 (307)
T 2eva_A 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148 (307)
T ss_dssp T--TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEEC
T ss_pred c--CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEc
Confidence 6 458999999999999999976543 24788999999999999999999932228999999999999998886 7999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||+++..... .....||+.|+|||+..+..++.++||||||+++|||++|+.||.............+....
T Consensus 149 Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-- 221 (307)
T 2eva_A 149 DFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-- 221 (307)
T ss_dssp CCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC--
T ss_pred ccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC--
Confidence 99999755332 22446999999999999889999999999999999999999999754333222111111100
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
........+. .+.+++.+||+.||++||+++++++.|+.+.+..
T Consensus 222 ----~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 222 ----RPPLIKNLPK------PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp ----CCCCBTTCCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred ----CCCcccccCH------HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 0111111111 2345788899999999999999999999885443
No 119
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.7e-39 Score=378.34 Aligned_cols=256 Identities=23% Similarity=0.365 Sum_probs=209.7
Q ss_pred hccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||.||+|.+.. +..||||++..... ..+.|.+|+.+|++++||||++++++
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~hpniv~l~~~ 284 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---------------EVEEFLKEAAVMKEIKHPNLVQLLGV 284 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---------------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---------------chHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 568888999999999999998875 88999999864321 24679999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||+++|+|.++++......+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 285 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 361 (495)
T 1opk_A 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVAD 361 (495)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred EecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEee
Confidence 99999999999999999999999876666689999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||+++...... ........++..|+|||++.+..++.++|||||||++|||++ |..||...... .....+..
T Consensus 362 FG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~---- 434 (495)
T 1opk_A 362 FGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK---- 434 (495)
T ss_dssp TTCEECCTTCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHT----
T ss_pred cccceeccCCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc----
Confidence 99998764432 222334567889999999988889999999999999999999 99999754322 22222221
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
..+...+..+. ..+..++.+||+.||++||++.++++.|+.+.
T Consensus 435 ------~~~~~~~~~~~--~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 435 ------DYRMERPEGCP--EKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ------TCCCCCCTTCC--HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ------CCCCCCCCCCC--HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11111111111 22345788899999999999999999998763
No 120
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.4e-39 Score=363.88 Aligned_cols=248 Identities=24% Similarity=0.249 Sum_probs=190.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHH-HhcCCCCceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKT-LGSIRHKNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpniv~l~ 762 (1035)
.++|...+.||+|+||.||+|+++. ++.||||++........ ...+.+.+|..+ ++.++||||++++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-----------~~~~~~~~e~~~ll~~~~hp~Iv~l~ 105 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK-----------KEEKHIMSERNVLLKNVKHPFLVGLH 105 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC------------------------CCBCCCCCTTBCCEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh-----------HHHHHHHHHHHHHHHhCCCCCCCCEE
Confidence 3679999999999999999998764 88999999965433221 123456677777 5678999999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+.+..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. ||+||||||+||+++.+|++||
T Consensus 106 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL 180 (373)
T 2r5t_A 106 FSFQTADKLYFVLDYINGGELFYHLQRERC--FLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVL 180 (373)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEE
Confidence 999999999999999999999999987654 88999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 181 ~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~- 255 (373)
T 2r5t_A 181 TDFGLCKENIEHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILNKP- 255 (373)
T ss_dssp CCCCBCGGGBCCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHHHHHHHSC-
T ss_pred eeCccccccccCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHhcc-
Confidence 9999998643322 223467899999999999999999999999999999999999999975321 11111111100
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKD 965 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~e 965 (1035)
.......+ ..+..++.+||++||++||++.+
T Consensus 256 ------~~~~~~~~------~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 256 ------LQLKPNIT------NSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ------CCCCSSSC------HHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ------cCCCCCCC------HHHHHHHHHHcccCHHhCCCCCC
Confidence 00111111 12345778899999999999853
No 121
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.9e-39 Score=351.19 Aligned_cols=263 Identities=23% Similarity=0.357 Sum_probs=214.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|.+.. ++.||+|++..... ..+.+.+|+.++++++||||+++++
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------~~~~~~~E~~~l~~l~h~~i~~~~~ 76 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---------------EVEEFLKEAAVMKEIKHPNLVQLLG 76 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST---------------HHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH---------------HHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 4678889999999999999998775 88999999864321 2467899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+++..|+||||+++++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 77 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~ 153 (288)
T 3kfa_A 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVA 153 (288)
T ss_dssp EECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEc
Confidence 999999999999999999999999886666799999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhcc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|||.+........ .......+|+.|+|||+..+..++.++||||||+++|+|++ |..||...... .....+....
T Consensus 154 Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~- 229 (288)
T 3kfa_A 154 DFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDY- 229 (288)
T ss_dssp CCCGGGTSCSSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTC-
T ss_pred cCccceeccCCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccC-
Confidence 9999987654332 22334567889999999988899999999999999999999 99999754322 2222221110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHHh
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREEC 980 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~~ 980 (1035)
........+ ..+.+++.+|++.||++||++.++++.|+.+..+....
T Consensus 230 -----~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~~ 276 (288)
T 3kfa_A 230 -----RMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 276 (288)
T ss_dssp -----CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCC------HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 000111111 22345788899999999999999999999987665443
No 122
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.9e-39 Score=363.78 Aligned_cols=278 Identities=15% Similarity=0.201 Sum_probs=206.8
Q ss_pred hccccCCeeeeeCCcEEEEEEECC------CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCcee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN------GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIV 759 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 759 (1035)
++|.+.+.||+|+||+||+|.+.. ++.||||++.........+. .+........+.+|+..++.++||||+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~---~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTEL---KFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHH---HHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHH---HHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 589999999999999999998764 47899999865432111000 000001123466778888899999999
Q ss_pred eEEeEEEcC----CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc
Q 039419 760 RFLGCCWNR----NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG 835 (1035)
Q Consensus 760 ~l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~ 835 (1035)
++++++... ...|+||||+ |++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 999998765 4579999999 999999997653 3489999999999999999999999 999999999999999
Q ss_pred --CCCceEEeeccCccccccCCcc-----ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCC
Q 039419 836 --PEFEPYIADFGLAKLVVEGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIP 908 (1035)
Q Consensus 836 --~~~~~kl~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~ 908 (1035)
.++.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 8899999999999876543221 112345699999999999999999999999999999999999999985432
Q ss_pred CchhHHHHHHHh--ccchhhhccccc-CCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 909 EGLHIVDWVRQK--RGAIEVLDKSLR-ARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 909 ~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
.. ....+.... .......++.+. ...+. .+..++..||+.||++||++.++++.|+++.....
T Consensus 267 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 267 DP-KYVRDSKIRYRENIASLMDKCFPAANAPG------EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp CH-HHHHHHHHHHHHCHHHHHHHHSCTTCCCH------HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CH-HHHHHHHHHhhhhHHHHHHHhcccccCHH------HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 21 122211111 111122222221 11111 23457778999999999999999999999876543
No 123
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.1e-39 Score=374.16 Aligned_cols=255 Identities=27% Similarity=0.455 Sum_probs=200.5
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||.||+|.+.++..||||++..... ..+.|.+|+.++++++||||+++++++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~hp~iv~~~~~~ 248 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------------SPEAFLQEAQVMKKLRHEKLVQLYAVV 248 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---------------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---------------CHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 56888899999999999999999888999999965321 246799999999999999999999998
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
.+ +..|+||||+++|+|.++++......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 249 ~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~Df 324 (452)
T 1fmk_A 249 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 324 (452)
T ss_dssp CS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred cC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCC
Confidence 76 6789999999999999999865445589999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccch
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
|+++....... .......++..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+...
T Consensus 325 G~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~---- 397 (452)
T 1fmk_A 325 GLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG---- 397 (452)
T ss_dssp CTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTT----
T ss_pred ccceecCCCce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcC----
Confidence 99987654322 22234557889999999988899999999999999999999 9999975422 1122221111
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
.+...+..+. ..+.+++.+||+.||++|||++++++.|+++.
T Consensus 398 ------~~~~~~~~~~--~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 398 ------YRMPCPPECP--ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ------CCCCCCTTSC--HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ------CCCCCCCCCC--HHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 1111111111 12345788899999999999999999988763
No 124
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=353.64 Aligned_cols=263 Identities=24% Similarity=0.401 Sum_probs=200.7
Q ss_pred hccccCCeeeeeCCcEEEEEEECC-----CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN-----GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
++|...+.||+|+||+||+|.+.. +..||||++...... .....+.+|+.++++++||||++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~ 110 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-------------KQRVDFLGEAGIMGQFSHHNIIR 110 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH-------------HHHHHHHHHHHHHHTCCCTTBCC
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCH-------------HHHHHHHHHHHHHHhCCCCCCCc
Confidence 567778999999999999997653 246999999654321 12457899999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++.+.+..++||||+++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+
T Consensus 111 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~ 186 (333)
T 1mqb_A 111 LEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVC 186 (333)
T ss_dssp EEEEECSSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred EEEEEecCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcE
Confidence 9999999999999999999999999997643 3489999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCcc-ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~ 918 (1035)
||+|||.++........ .......+|+.|+|||+..+..++.++||||||+++|||++ |+.||..... ......+.
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~~~ 264 (333)
T 1mqb_A 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKAIN 264 (333)
T ss_dssp EECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHH
T ss_pred EECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHH
Confidence 99999999876543211 11223456889999999988899999999999999999999 9999965422 11111111
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREE 979 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 979 (1035)
... ........+ ..+..++.+||+.||++||++.++++.|+.+......
T Consensus 265 ~~~------~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 265 DGF------RLPTPMDCP------SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp TTC------CCCCCTTCB------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred CCC------cCCCcccCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 110 000011111 2234578889999999999999999999998765444
No 125
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.1e-38 Score=356.67 Aligned_cols=261 Identities=25% Similarity=0.380 Sum_probs=208.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCce
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNI 758 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni 758 (1035)
.++|...+.||+|+||.||+|.+. .++.||||++....... ....+.+|+.++++++||||
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~~i 90 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-------------ERIEFLNEASVMKEFNCHHV 90 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHH-------------HHHHHHHHHHHGGGCCCTTB
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHH-------------HHHHHHHHHHHHHhcCCCCE
Confidence 467999999999999999999664 36889999986432211 24578999999999999999
Q ss_pred eeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC--------CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcc
Q 039419 759 VRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD--------SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKAN 830 (1035)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~ 830 (1035)
+++++++.+.+..++||||+++|+|.+++...+. ..+++..+..++.||+.||+|||+. ||+||||||+
T Consensus 91 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~ 167 (322)
T 1p4o_A 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAAR 167 (322)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGG
T ss_pred eeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccc
Confidence 9999999999999999999999999999976431 3468999999999999999999999 9999999999
Q ss_pred cEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCC
Q 039419 831 NILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPE 909 (1035)
Q Consensus 831 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~ 909 (1035)
||+++.++.+||+|||+++...............||+.|+|||+..+..++.++||||||+++|||++ |+.||.....
T Consensus 168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~- 246 (322)
T 1p4o_A 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN- 246 (322)
T ss_dssp GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-
T ss_pred eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-
Confidence 99999999999999999987655443333345567899999999988899999999999999999999 8999975421
Q ss_pred chhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 910 GLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
......+... .....+.. .. ..+..++.+||+.||++||++.|++++|+++..
T Consensus 247 -~~~~~~~~~~---------~~~~~~~~-~~--~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 247 -EQVLRFVMEG---------GLLDKPDN-CP--DMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp -HHHHHHHHTT---------CCCCCCTT-CC--HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred -HHHHHHHHcC---------CcCCCCCC-CC--HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1111111111 01111111 11 123457888999999999999999999988644
No 126
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.3e-38 Score=371.19 Aligned_cols=367 Identities=20% Similarity=0.210 Sum_probs=238.5
Q ss_pred cCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhh
Q 039419 45 PFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGA 124 (1035)
Q Consensus 45 ~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~ 124 (1035)
..+..++.+++|++|+|++|.+++ +| .++.+++|++|+|++|++++ +| ++.+++|++|+|++|++++ +| ++.
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~ 104 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTP 104 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTT
T ss_pred ccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCC
Confidence 344456666777777777777764 34 46667777777777777763 33 6666777777777777664 33 666
Q ss_pred hccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccce
Q 039419 125 CIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSL 204 (1035)
Q Consensus 125 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L 204 (1035)
+++|++|++++|++++ +| ++.+++|++|++++| ++++. .++.+++|++|
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N-------------------------~l~~l---~l~~l~~L~~L 153 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARN-------------------------TLTEI---DVSHNTQLTEL 153 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTS-------------------------CCSCC---CCTTCTTCCEE
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCC-------------------------cccee---ccccCCcCCEE
Confidence 6667777777666663 33 555555555555555 44432 15555666666
Q ss_pred eecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCC
Q 039419 205 SVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFS 284 (1035)
Q Consensus 205 ~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 284 (1035)
++++|...+.+ .+..+++|+.|++++|++++ +| ++.+++|+.|++++|++++. .+..+++|+.|+|++|+++
T Consensus 154 ~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~ 225 (457)
T 3bz5_A 154 DCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT 225 (457)
T ss_dssp ECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCS
T ss_pred ECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccc
Confidence 66666433333 35566666666666666664 33 56666666666666666653 2666777777777777777
Q ss_pred CCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcC
Q 039419 285 GSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNA 364 (1035)
Q Consensus 285 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 364 (1035)
+ +| ++.+++|+.|++++|++++.. +..+++|+.|+++.|+++.+....|.+.+.+| +..+++|+.|++++|.
T Consensus 226 ~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~ 297 (457)
T 3bz5_A 226 E-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNT 297 (457)
T ss_dssp C-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCT
T ss_pred c-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCc
Confidence 5 34 667777777777777777653 34556667777666555444333344444444 3455556666666655
Q ss_pred CCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEE
Q 039419 365 LTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVL 444 (1035)
Q Consensus 365 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 444 (1035)
+.+.+|. ...+|+.|+ +.++++|++|+|++|+|++. .+..+++|+.|
T Consensus 298 ~l~~l~~---~~~~L~~L~---------------------------l~~~~~L~~L~L~~N~l~~l---~l~~l~~L~~L 344 (457)
T 3bz5_A 298 QLYLLDC---QAAGITELD---------------------------LSQNPKLVYLYLNNTELTEL---DVSHNTKLKSL 344 (457)
T ss_dssp TCCEEEC---TTCCCSCCC---------------------------CTTCTTCCEEECTTCCCSCC---CCTTCTTCSEE
T ss_pred ccceecc---CCCcceEec---------------------------hhhcccCCEEECCCCccccc---ccccCCcCcEE
Confidence 4433332 122333333 34456799999999999974 38999999999
Q ss_pred EcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhcc
Q 039419 445 DISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEG 512 (1035)
Q Consensus 445 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 512 (1035)
++++|+|+++ +.|..|++++|.+.|. ..+..|+.++|++|+++|.+|..++...+
T Consensus 345 ~l~~N~l~~l--------~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~~~~ 399 (457)
T 3bz5_A 345 SCVNAHIQDF--------SSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLDQFG 399 (457)
T ss_dssp ECCSSCCCBC--------TTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBCTTS
T ss_pred ECCCCCCCCc--------cccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhcccC
Confidence 9999999963 5678889999999865 35567888999999999999987765443
No 127
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.1e-38 Score=348.64 Aligned_cols=250 Identities=25% Similarity=0.403 Sum_probs=199.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|.+.+.||+|+||+||+|.+. +++.||+|++........ ...+.+.+|+.++++++||||+++++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~~ 76 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA-----------GVEHQLRREVEIQSHLRHPNILRLYG 76 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHH-----------TCHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchh-----------hHHHHHHHHHHHHHcCCCCCCcchhh
Confidence 467999999999999999999776 477999999854322211 23567899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..++||||+++|+|.+++..... +++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 151 (279)
T 3fdn_A 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIA 151 (279)
T ss_dssp EEECSSEEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEEC
T ss_pred eEecCCEEEEEEecCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEE
Confidence 99999999999999999999999987654 89999999999999999999998 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||++....... .....||+.|+|||+..+..++.++||||||+++|+|++|+.||...... .....+..
T Consensus 152 Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~---- 221 (279)
T 3fdn_A 152 DFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRISR---- 221 (279)
T ss_dssp SCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHH----
T ss_pred eccccccCCccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHHHHHh----
Confidence 999986543322 23467999999999999889999999999999999999999999753211 11111111
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.........+ ....+++.+||++||++||++.|++++
T Consensus 222 ---~~~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 222 ---VEFTFPDFVT------EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ---TCCCCCTTSC------HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ---CCCCCCCcCC------HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0111111111 123457888999999999999999986
No 128
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=350.70 Aligned_cols=263 Identities=20% Similarity=0.275 Sum_probs=193.8
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCccccccccc------------ccccccccHHHHHHHHHHHhc
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQN------------DKIGIGGVRDSFSAEIKTLGS 752 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~E~~~l~~ 752 (1035)
++|...+.||+|+||.||+|.+. +++.||||++............. .........+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 67899999999999999999775 58999999997654322110000 000011224678999999999
Q ss_pred CCCCceeeEEeEEEc--CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcc
Q 039419 753 IRHKNIVRFLGCCWN--RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKAN 830 (1035)
Q Consensus 753 l~hpniv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~ 830 (1035)
++||||+++++++.+ .+..|+||||+++++|.+++.. ..+++..+..++.||++||+|||+. +|+||||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 166 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS 166 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence 999999999999987 5678999999999999987643 2489999999999999999999999 9999999999
Q ss_pred cEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCC---CCccccchhHHHHHHHHHhCCCCCCCCC
Q 039419 831 NILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMK---ITEKSDVYSYGVVVLEVLTGKQPIDPTI 907 (1035)
Q Consensus 831 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlGvvl~elltg~~P~~~~~ 907 (1035)
||+++.++.+||+|||+++....... ......||+.|+|||+..+.. ++.++|||||||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999987654322 223567999999999987655 4778999999999999999999997532
Q ss_pred CCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 908 PEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. ......+.... .........+ ..+.+++.+||++||++||++.|++++
T Consensus 245 ~--~~~~~~~~~~~-----~~~~~~~~~~------~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 I--MCLHSKIKSQA-----LEFPDQPDIA------EDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp H--HHHHHHHHHCC-----CCCCSSSCCC------HHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred H--HHHHHHHhccc-----CCCCCccccC------HHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1 11111111100 0000001111 123457888999999999999999864
No 129
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.3e-38 Score=355.06 Aligned_cols=264 Identities=23% Similarity=0.360 Sum_probs=209.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEE------CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCc
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM------ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKN 757 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpn 757 (1035)
.++|...+.||+|+||+||+|++ .+++.||||++....... ..+.+.+|+.+++++ +|||
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~~hp~ 92 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-------------EHRALMSELKILIHIGHHLN 92 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH-------------HHHHHHHHHHHHHHHCCCTT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcH-------------HHHHHHHHHHHHHhcccCCC
Confidence 37899999999999999999974 246889999996543221 245789999999999 7999
Q ss_pred eeeEEeEEEcCC-cceEEEEeCCCCChhhhhhhcCCC--------------CCCHHHHHHHHHHHHHHHHHhhccCCCCe
Q 039419 758 IVRFLGCCWNRN-TRLLMYDYMPNGSLGSLLHERRDS--------------CLEWELRYRIILGAAQGLAYLHHDCVPPI 822 (1035)
Q Consensus 758 iv~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~--------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 822 (1035)
|+++++++...+ ..++||||+++|+|.+++...... .+++..+..++.|+++||+|||+. +|
T Consensus 93 iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i 169 (316)
T 2xir_A 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KC 169 (316)
T ss_dssp BCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred eeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 999999988755 589999999999999999765431 278999999999999999999999 99
Q ss_pred eccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCC
Q 039419 823 VHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQ 901 (1035)
Q Consensus 823 vHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~ 901 (1035)
+||||||+||+++.++.+||+|||+++...............||+.|+|||+..+..++.++||||||+++|||++ |+.
T Consensus 170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~ 249 (316)
T 2xir_A 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249 (316)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999987654433233345568899999999988899999999999999999998 999
Q ss_pred CCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 902 PIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 902 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
||....... .....+..... .......+ ..+..++.+||+.||++||++.|++++|+.+.+..
T Consensus 250 p~~~~~~~~-~~~~~~~~~~~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 250 PYPGVKIDE-EFCRRLKEGTR------MRAPDYTT------PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp SSTTCCCSH-HHHHHHHHTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCcccchhH-HHHHHhccCcc------CCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 997543321 12222211110 00111111 12455788899999999999999999999987544
No 130
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-38 Score=360.85 Aligned_cols=255 Identities=19% Similarity=0.246 Sum_probs=203.2
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.+.+.|.+.+.||+|+||+||+|.+. +++.||+|++...... ....+.+|+.++++++||||+++
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~--------------~~~~~~~E~~il~~l~hpnIv~~ 113 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL--------------DKYTVKNEISIMNQLHHPKLINL 113 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH--------------HHHHHHHHHHHHTTCCSTTBCCE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchh--------------hHHHHHHHHHHHHhCCCcCCCeE
Confidence 34578999999999999999999776 5899999998643211 13578899999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC--CCc
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP--EFE 839 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~--~~~ 839 (1035)
++++.+.+..|+||||++||+|.+++.... ..+++..+..++.||+.||+|||+. ||+||||||+||+++. ++.
T Consensus 114 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~ 189 (387)
T 1kob_A 114 HDAFEDKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASS 189 (387)
T ss_dssp EEEEECSSEEEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCC
T ss_pred EEEEEeCCEEEEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCc
Confidence 999999999999999999999999987543 3489999999999999999999999 9999999999999974 577
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..
T Consensus 190 vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~ 264 (387)
T 1kob_A 190 VKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKR 264 (387)
T ss_dssp EEECCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHH
T ss_pred eEEEecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHh
Confidence 99999999987654322 2245799999999999988999999999999999999999999975421 111221111
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
... ..........+ ..+.+++.+||+.||++||++.|++++
T Consensus 265 ~~~---~~~~~~~~~~s------~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 265 CDW---EFDEDAFSSVS------PEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CCC---CCCSSTTTTSC------HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCC---CCCccccccCC------HHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 100 00111111111 234567888999999999999999874
No 131
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-38 Score=346.45 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=207.0
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||.||+|.+.+++.||||++..... ..+.+.+|++++++++||||+++++++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~h~~i~~~~~~~ 77 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---------------SPDAFLAEANLMKQLQHQRLVRLYAVV 77 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---------------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---------------cHHHHHHHHHHHHhCCCcCcceEEEEE
Confidence 67889999999999999999998888999999864321 246799999999999999999999987
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
. .+..++||||+++++|.+++.......+++..+..++.|+++||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 78 ~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 153 (279)
T 1qpc_A 78 T-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 153 (279)
T ss_dssp C-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred c-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCC
Confidence 6 45689999999999999999765433489999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccch
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
|.++....... .......++..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+...
T Consensus 154 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~---- 226 (279)
T 1qpc_A 154 GLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERG---- 226 (279)
T ss_dssp TTCEECSSSCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTT----
T ss_pred cccccccCccc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcc----
Confidence 99987654332 22234567889999999988889999999999999999999 99999754221 111111111
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
.........+ ..+..++.+||+.||++||++.++++.|+++...
T Consensus 227 --~~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 227 --YRMVRPDNCP------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp --CCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --cCCCCccccc------HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 0001111111 1334578889999999999999999999988654
No 132
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=8.9e-39 Score=376.74 Aligned_cols=254 Identities=22% Similarity=0.268 Sum_probs=205.8
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||.||+|++. +|+.||||++........ ...+.+.+|+.++++++|||||+++++
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~-----------~~~~~~~~E~~iL~~l~hp~Iv~l~~~ 252 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR-----------KGEAMALNEKQILEKVNSRFVVSLAYA 252 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhh-----------HHHHHHHHHHHHHHHcCCCCEeeEEEE
Confidence 56888899999999999999876 589999999964322211 234678899999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||++||+|.+++...+...+++..+..++.||+.||+|||+. ||+||||||+|||++.+|++||+|
T Consensus 253 ~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~D 329 (576)
T 2acx_A 253 YETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISD 329 (576)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECC
T ss_pred EeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEe
Confidence 99999999999999999999999876655699999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCc--hhHHHHHHHhcc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEG--LHIVDWVRQKRG 922 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~--~~~~~~~~~~~~ 922 (1035)
||+++....... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+...+...
T Consensus 330 FGla~~~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~-- 404 (576)
T 2acx_A 330 LGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-- 404 (576)
T ss_dssp CTTCEECCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC--
T ss_pred cccceecccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc--
Confidence 999987654322 234589999999999998889999999999999999999999997643221 1111111110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRP-----TMKDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RP-----s~~el~~~ 969 (1035)
........+ ..+.+++.+||++||++|| +++|++++
T Consensus 405 -----~~~~p~~~s------~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 405 -----PEEYSERFS------PQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -----CCCCCTTSC------HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -----cccCCccCC------HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 011111111 2334577889999999999 78888875
No 133
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=359.02 Aligned_cols=254 Identities=22% Similarity=0.282 Sum_probs=194.5
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCC--CceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRH--KNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~ 763 (1035)
+.|.+.+.||+|+||.||+|...+++.||||++....... ...+.+.+|+.++++++| |||+++++
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~~~~~~iv~~~~ 76 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN------------QTLDSYRNEIAYLNKLQQHSDKIIRLYD 76 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCH------------HHHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccch------------HHHHHHHHHHHHHHhhhhcCCceEEEee
Confidence 5688999999999999999998889999999986543221 124678999999999986 99999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+|||+ .+++|.+++...+. +++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+
T Consensus 77 ~~~~~~~~~lv~e~-~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~ 149 (343)
T 3dbq_A 77 YEITDQYIYMVMEC-GNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLI 149 (343)
T ss_dssp EEECSSEEEEEECC-CSEEHHHHHHHSCC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEEC
T ss_pred eEeeCCEEEEEEeC-CCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEe
Confidence 99999999999995 58899999987544 89999999999999999999999 999999999999997 6789999
Q ss_pred eccCccccccCCccccccccCCcccccCCccccc-----------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchh
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-----------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLH 912 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~ 912 (1035)
|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 150 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 229 (343)
T 3dbq_A 150 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 229 (343)
T ss_dssp CCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH
T ss_pred ecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH
Confidence 9999987655433333345689999999998754 67889999999999999999999999754221111
Q ss_pred HHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039419 913 IVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMI 970 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L 970 (1035)
... .++.......+.... ..+.+++.+||+.||++|||+.|++++.
T Consensus 230 ~~~----------~~~~~~~~~~~~~~~--~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 230 LHA----------IIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp HHH----------HHCTTSCCCCCCCSC--HHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHH----------HhcCCcccCCcccCC--HHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 111 111111111111111 1234578889999999999999999864
No 134
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-38 Score=347.71 Aligned_cols=249 Identities=22% Similarity=0.326 Sum_probs=179.4
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|.+.+.||+|+||.||+|.+. +++.||+|++........ ...+.+.+|+.++++++||||++++++
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~~~ 81 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKS-----------DMQGRIEREISYLRLLRHPHIIKLYDV 81 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC----------------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchH-----------HHHHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 57999999999999999999765 589999999976443222 235689999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..++||||+ ++++.+++..... +++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 82 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~D 155 (275)
T 2eue_A 82 IKSKDEIIMVIEYA-GNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIAD 155 (275)
T ss_dssp EECSSCEEEEEECC-CEEHHHHHHTSSS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECC
T ss_pred EecCCeEEEEehhc-CCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEee
Confidence 99999999999999 7788888876543 89999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||.++....... .....||+.|+|||+..+..+ +.++||||+|+++|||++|+.||...... .....+....
T Consensus 156 fg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~-- 228 (275)
T 2eue_A 156 FGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNGV-- 228 (275)
T ss_dssp SSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC--
T ss_pred cccceeccCccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC--
Confidence 999986654322 234579999999999877665 68999999999999999999999754211 1111111110
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.......+ ....+++.+||++||++|||++|++++
T Consensus 229 -----~~~~~~~~------~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 -----YTLPKFLS------PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -----CCCCTTSC------HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -----CCCCccCC------HHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 01111111 123457888999999999999999874
No 135
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.9e-38 Score=345.06 Aligned_cols=258 Identities=26% Similarity=0.471 Sum_probs=201.1
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||+||+|++. +++.||||++........... ....+.+.+|+.++++++||||++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 91 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM-------IEKFQEFQREVFIMSNLNHPNIVKLYGL 91 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHH-------HCCSHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhH-------HHHHHHHHHHHHHHHhCCCCCchhhhee
Confidence 57888999999999999999875 689999999865433222110 0123679999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCC--eeccCCCcccEEEcCCCc---
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPP--IVHRDIKANNILIGPEFE--- 839 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivHrDikp~NIll~~~~~--- 839 (1035)
+.+.. ++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 92 ~~~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~ 165 (287)
T 4f0f_A 92 MHNPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAP 165 (287)
T ss_dssp ETTTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCS
T ss_pred ecCCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCc
Confidence 86554 79999999999999886543 3489999999999999999999999 7 999999999999988776
Q ss_pred --eEEeeccCccccccCCccccccccCCcccccCCccc--ccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHH
Q 039419 840 --PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYG--YMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVD 915 (1035)
Q Consensus 840 --~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~ 915 (1035)
+||+|||+++.... ......||+.|+|||++ ....++.++||||||+++|||++|+.||............
T Consensus 166 ~~~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 240 (287)
T 4f0f_A 166 VCAKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240 (287)
T ss_dssp CCEEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHH
T ss_pred eeEEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHH
Confidence 99999999975433 22346799999999997 3455788999999999999999999999865443332222
Q ss_pred HHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHH
Q 039419 916 WVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKE 972 (1035)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~ 972 (1035)
.+.... .........+ ..+.+++.+||+.||++||+++|+++.|++
T Consensus 241 ~~~~~~-----~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 241 MIREEG-----LRPTIPEDCP------PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHHSC-----CCCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHhccC-----CCCCCCcccC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 222111 1111111111 123457888999999999999999999875
No 136
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=357.78 Aligned_cols=252 Identities=23% Similarity=0.288 Sum_probs=187.0
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
+.+.|...+.||+|+||+||+|++. +++.||||++.... ..+.+.+|+.++++++||||++++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------------~~~~~~~E~~~l~~l~h~niv~~~ 114 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----------------DKKIVRTEIGVLLRLSHPNIIKLK 114 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------------------CHHHHHCCCTTBCCEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----------------hHHHHHHHHHHHHhCCCCCCccee
Confidence 3467899999999999999999887 47899999986432 134678899999999999999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC---CCc
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP---EFE 839 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~---~~~ 839 (1035)
+++.+.+..++||||+++|+|.+++...+. +++..+..++.||+.||+|||+. +|+||||||+||+++. ++.
T Consensus 115 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~ 189 (349)
T 2w4o_A 115 EIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAP 189 (349)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHTTCSS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCC
T ss_pred eeEecCCeEEEEEEeCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCC
Confidence 999999999999999999999999976543 89999999999999999999999 9999999999999975 889
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....+..
T Consensus 190 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~i~~ 265 (349)
T 2w4o_A 190 LKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-MFRRILN 265 (349)
T ss_dssp EEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-HHHHHHT
T ss_pred EEEccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-HHHHHHh
Confidence 9999999998654432 22356799999999999998999999999999999999999999975432211 1111111
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. ... ......... ...+.+++.+||+.||++||++.|++++
T Consensus 266 ~--~~~-~~~~~~~~~------~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 266 C--EYY-FISPWWDEV------SLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp T--CCC-CCTTTTTTS------CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C--CCc-cCCchhhhC------CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000 000000111 1234567888999999999999999874
No 137
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=346.22 Aligned_cols=253 Identities=24% Similarity=0.352 Sum_probs=182.4
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|.+.+.||+|+||.||+|++. +++.||||++........ ...+.+.+|+.++++++||||+++++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~~ 78 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKA-----------GMVQRVQNEVKIHCQLKHPSILELYN 78 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHTTBCCTTBCCEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhh-----------hHHHHHHHHHHHHHhCCCCCeEeEEE
Confidence 467999999999999999999874 689999999854322111 23568999999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 79 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~ 154 (278)
T 3cok_A 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIA 154 (278)
T ss_dssp EEECSSEEEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEEC
T ss_pred EEccCCeEEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEE
Confidence 9999999999999999999999997643 3489999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||.+........ ......||+.|+|||+..+..++.++||||||+++|||++|+.||........ .....
T Consensus 155 dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~-- 225 (278)
T 3cok_A 155 DFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LNKVV-- 225 (278)
T ss_dssp CCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CC--
T ss_pred eecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HHHHh--
Confidence 9999986543221 22346799999999999888899999999999999999999999975432211 00000
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..+.......+ ....+++.+||+.||++||++++++++
T Consensus 226 --~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 226 --LADYEMPSFLS------IEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp --SSCCCCCTTSC------HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred --hcccCCccccC------HHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 00001111111 133467888999999999999999874
No 138
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.1e-38 Score=354.93 Aligned_cols=265 Identities=24% Similarity=0.341 Sum_probs=205.7
Q ss_pred HhccccCCeeeeeCCcEEEEEEE------CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCce
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM------ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNI 758 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni 758 (1035)
.++|...+.||+|+||.||+|++ .+++.||||++....... ...++.+|+.++++++||||
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~~i 95 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ-------------DELDFLMEALIISKFNHQNI 95 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHH-------------HHHHHHHHHHHHHHCCCTTB
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchh-------------hHHHHHHHHHHHhhCCCCCC
Confidence 36789999999999999999974 247789999996432211 24578999999999999999
Q ss_pred eeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCC-----CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEE
Q 039419 759 VRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRD-----SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNIL 833 (1035)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIl 833 (1035)
+++++++.+.+..|+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 96 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIl 172 (327)
T 2yfx_A 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL 172 (327)
T ss_dssp CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEE
Confidence 9999999999999999999999999999987543 3488999999999999999999999 9999999999999
Q ss_pred EcC---CCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCC
Q 039419 834 IGP---EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPE 909 (1035)
Q Consensus 834 l~~---~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~ 909 (1035)
++. +..+||+|||+++...............||+.|+|||+..+..++.++||||||+++|||++ |+.||.....
T Consensus 173 i~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~- 251 (327)
T 2yfx_A 173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN- 251 (327)
T ss_dssp ESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-
T ss_pred EecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-
Confidence 984 44699999999986655443333445678999999999988899999999999999999998 9999975421
Q ss_pred chhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHH
Q 039419 910 GLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREE 979 (1035)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 979 (1035)
......+..... .......+ ..+..++.+||+.||++||++.+++++|+.+......
T Consensus 252 -~~~~~~~~~~~~------~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~ 308 (327)
T 2yfx_A 252 -QEVLEFVTSGGR------MDPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308 (327)
T ss_dssp -HHHHHHHHTTCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred -HHHHHHHhcCCC------CCCCCCCC------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHH
Confidence 122222221100 00111111 1234578889999999999999999999988766544
No 139
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.4e-38 Score=358.56 Aligned_cols=253 Identities=21% Similarity=0.264 Sum_probs=191.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~hpniv~~~~ 83 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---------------IDENVQREIINHRSLRHPNIVRFKE 83 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---------------SCHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---------------ccHHHHHHHHHHHhCCCCCCCcEEE
Confidence 367999999999999999999876 689999999854321 2356889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc--eE
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE--PY 841 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~--~k 841 (1035)
++.+.+..|+||||+++|+|.+++...+. +++..+..++.|++.||+|||+. ||+||||||+||+++.++. +|
T Consensus 84 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~k 158 (361)
T 3uc3_A 84 VILTPTHLAIIMEYASGGELYERICNAGR--FSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLK 158 (361)
T ss_dssp EEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEE
T ss_pred EEeeCCEEEEEEEeCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEE
Confidence 99999999999999999999999977654 89999999999999999999999 9999999999999987765 99
Q ss_pred EeeccCccccccCCccccccccCCcccccCCcccccCCCCcc-ccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHh
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEK-SDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQK 920 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 920 (1035)
|+|||+++...... ......||+.|+|||++.+..++.+ +||||+||++|||++|+.||....... .....+...
T Consensus 159 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~ 234 (361)
T 3uc3_A 159 ICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRI 234 (361)
T ss_dssp ECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHH
T ss_pred EeecCccccccccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHH
Confidence 99999997543322 2235679999999999887777655 899999999999999999997643321 111111111
Q ss_pred ccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 921 RGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. ........... .......++.+||++||++|||+.|++++
T Consensus 235 ~------~~~~~~~~~~~--~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 235 L------SVKYSIPDDIR--ISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp H------TTCCCCCTTSC--CCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred h------cCCCCCCCcCC--CCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 00001000000 01223457888999999999999999986
No 140
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=8.6e-38 Score=348.88 Aligned_cols=260 Identities=21% Similarity=0.272 Sum_probs=206.6
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.+.+.|.+.+.||+|+||.||+|.+. +|+.||||++......... .....+.+.+|+.++++++||||+++
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~ 80 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--------RGVSREEIEREVSILRQVLHHNVITL 80 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS--------SSBCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc--------cchhHHHHHHHHHHHHhCCCCCcceE
Confidence 35678999999999999999999876 5899999999764332211 01236789999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC---
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF--- 838 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~--- 838 (1035)
++++.+.+..|+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~ 155 (321)
T 2a2a_A 81 HDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPI 155 (321)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSS
T ss_pred EEEEecCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCc
Confidence 999999999999999999999999997654 389999999999999999999999 999999999999999888
Q ss_pred -ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 839 -EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 839 -~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
.+||+|||+++...... ......||+.|+|||+..+..++.++||||||+++|+|++|+.||..... ......+
T Consensus 156 ~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i 230 (321)
T 2a2a_A 156 PHIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANI 230 (321)
T ss_dssp CCEEECCCTTCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHH
T ss_pred CCEEEccCccceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH
Confidence 79999999998765432 22356799999999999988999999999999999999999999975321 1111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... ...........+ ..+.+++.+||++||++|||+.|++++
T Consensus 231 ~~~~---~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 231 TSVS---YDFDEEFFSHTS------ELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HTTC---CCCCHHHHTTCC------HHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred Hhcc---cccChhhhcccC------HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1100 000111111111 124567888999999999999999884
No 141
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.1e-37 Score=351.61 Aligned_cols=265 Identities=26% Similarity=0.353 Sum_probs=208.4
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhc--CCCCcee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGS--IRHKNIV 759 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv 759 (1035)
..+.++|...+.||+|+||.||+|++. ++.||||++... ..+.+.+|++++.. ++||||+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----------------~~~~~~~e~~~~~~~~l~h~ni~ 99 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----------------EERSWFREAEIYQTVMLRHENIL 99 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG-----------------GHHHHHHHHHHHHHSCCCCTTBC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch-----------------hHHHHHHHHHHHHHhhcCCCcEE
Confidence 445588999999999999999999885 899999998532 13567889999887 7899999
Q ss_pred eEEeEEEcCC----cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhh--------ccCCCCeeccCC
Q 039419 760 RFLGCCWNRN----TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLH--------HDCVPPIVHRDI 827 (1035)
Q Consensus 760 ~l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivHrDi 827 (1035)
++++++...+ ..|+||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||
T Consensus 100 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dl 173 (342)
T 1b6c_B 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDL 173 (342)
T ss_dssp CEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCC
T ss_pred EEEeeecccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCC
Confidence 9999998876 789999999999999999764 3899999999999999999999 77 9999999
Q ss_pred CcccEEEcCCCceEEeeccCccccccCCcc--ccccccCCcccccCCcccccC------CCCccccchhHHHHHHHHHhC
Q 039419 828 KANNILIGPEFEPYIADFGLAKLVVEGDFA--RSSNTVAGSYGYIAPEYGYMM------KITEKSDVYSYGVVVLEVLTG 899 (1035)
Q Consensus 828 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGvvl~elltg 899 (1035)
||+||+++.++.+||+|||+++........ .......||+.|+|||++.+. .++.++||||||+++|||++|
T Consensus 174 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 174 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp SGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence 999999999999999999999876544321 123456799999999997765 233689999999999999999
Q ss_pred ----------CCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcc---cHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 039419 900 ----------KQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEV---EIEEMLQTLGVALLCVNPTPDDRPTMKDV 966 (1035)
Q Consensus 900 ----------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~l~~~cl~~dP~~RPs~~el 966 (1035)
+.||....+.......+.... .....+...+. .......+.+++.+||+.||++||++.++
T Consensus 254 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 327 (342)
T 1b6c_B 254 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327 (342)
T ss_dssp BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH------TTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred cCcCCcccccccCccccCcCcccHHHHHHHH------HHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence 778876544333333322211 11111111111 11333345668899999999999999999
Q ss_pred HHHHHHHHHh
Q 039419 967 AAMIKEIKQE 976 (1035)
Q Consensus 967 ~~~L~~~~~~ 976 (1035)
+++|+.+.++
T Consensus 328 ~~~L~~i~~~ 337 (342)
T 1b6c_B 328 KKTLSQLSQQ 337 (342)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999998654
No 142
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=362.02 Aligned_cols=271 Identities=19% Similarity=0.261 Sum_probs=207.4
Q ss_pred hccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|.+.+.||+|+||+||+|++.. ++.||||++...... ...+.+.+|++++++++||||++++++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hpnIv~~~~~ 75 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-------------RPVDVQMREFEVLKKLNHKNIVKLFAI 75 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-------------SCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc-------------chHHHHHHHHHHHHhcCCCCCCeEEEe
Confidence 578899999999999999998764 899999999643221 125678899999999999999999999
Q ss_pred EEcCC--cceEEEEeCCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE----cCC
Q 039419 765 CWNRN--TRLLMYDYMPNGSLGSLLHERRD-SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI----GPE 837 (1035)
Q Consensus 765 ~~~~~--~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll----~~~ 837 (1035)
+.+.+ ..|+||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||++ +.+
T Consensus 76 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 152 (396)
T 4eut_A 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQ 152 (396)
T ss_dssp EECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSC
T ss_pred eccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCc
Confidence 98765 67999999999999999976543 3389999999999999999999999 99999999999999 778
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCccccc--------CCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM--------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPE 909 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~ 909 (1035)
+.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 153 ~~~kL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 229 (396)
T 4eut_A 153 SVYKLTDFGAARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (396)
T ss_dssp EEEEECCGGGCEECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT
T ss_pred eeEEEecCCCceEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 889999999998764432 2235679999999998754 56778999999999999999999999754322
Q ss_pred ch--hHHHHHHHhccch--hhh----------cccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 910 GL--HIVDWVRQKRGAI--EVL----------DKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 910 ~~--~~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
.. .....+....... ..+ .................+..++.+||+.||++||++.|+++.++++..
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp TTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred cchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 21 1111111111100 000 000111111112233344568889999999999999999999888754
No 143
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.8e-38 Score=352.76 Aligned_cols=254 Identities=20% Similarity=0.272 Sum_probs=179.3
Q ss_pred hcccc---CCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCceee
Q 039419 686 KCLVE---DSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKNIVR 760 (1035)
Q Consensus 686 ~~~~~---~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~ 760 (1035)
++|.. .+.||+|+||+||+|.+. +++.||||++... ....+.+|+.++++++ ||||++
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----------------~~~~~~~e~~~l~~l~~h~niv~ 70 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----------------MEANTQKEITALKLCEGHPNIVK 70 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----------------GHHHHHHHHHHHHHTTTCTTBCC
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----------------hhhhHHHHHHHHHHhcCCCCeeE
Confidence 44544 478999999999999876 5899999998531 2456889999999997 999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC--
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF-- 838 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~-- 838 (1035)
+++++.+++..|+||||++||+|.+++...+. +++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~ 145 (325)
T 3kn6_A 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDN 145 (325)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----
T ss_pred EEEEEEcCCEEEEEEEccCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCc
Confidence 99999999999999999999999999987644 89999999999999999999999 999999999999998766
Q ss_pred -ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC--chhHHH
Q 039419 839 -EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPE--GLHIVD 915 (1035)
Q Consensus 839 -~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~--~~~~~~ 915 (1035)
.+||+|||+++...... .......||+.|+|||+..+..++.++||||+||++|||++|+.||...... ......
T Consensus 146 ~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~ 223 (325)
T 3kn6_A 146 LEIKIIDFGFARLKPPDN--QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE 223 (325)
T ss_dssp CEEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH
T ss_pred ccEEEeccccceecCCCC--CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH
Confidence 89999999998654432 2223567899999999999999999999999999999999999999754321 011111
Q ss_pred HHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 916 WVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
....... .......+........+.+++.+||++||++||+++|++++
T Consensus 224 ~~~~i~~------~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 224 IMKKIKK------GDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHTT------TCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHHHc------CCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1111100 00000100000111234567888999999999999998763
No 144
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9.6e-38 Score=346.85 Aligned_cols=269 Identities=19% Similarity=0.301 Sum_probs=200.5
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
..++|.+.+.||+|+||.||+|... +++.||||++........ ...+.+.+|+.++++++||||++++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~i~~~~ 98 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA-----------KARADCIKEIDLLKQLNHPNVIKYY 98 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCH-----------HHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCH-----------HHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 3468999999999999999999764 689999999975332221 2356789999999999999999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHER--RDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++.+.+..++||||+++++|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~ 175 (310)
T 2wqm_A 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVV 175 (310)
T ss_dssp EEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred EEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCE
Confidence 9999999999999999999999998752 234589999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHh
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQK 920 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 920 (1035)
||+|||+++....... ......|++.|+|||+..+..++.++||||||+++|||++|+.||.............+...
T Consensus 176 kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 253 (310)
T 2wqm_A 176 KLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC 253 (310)
T ss_dssp EECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT
T ss_pred EEEeccceeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc
Confidence 9999999986644321 22345789999999999888999999999999999999999999975432222222221111
Q ss_pred ccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHH
Q 039419 921 RGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREE 979 (1035)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 979 (1035)
. .........+ ..+..++.+||+.||++||++.++++.|+++.....+
T Consensus 254 ~-----~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 254 D-----YPPLPSDHYS------EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp C-----SCCCCTTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred c-----CCCCcccccC------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 0 0000001111 1234578889999999999999999999999766654
No 145
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.5e-39 Score=373.98 Aligned_cols=252 Identities=20% Similarity=0.232 Sum_probs=194.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|... +++.||||++........ .....+.+|+.+++.++||||+++++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~iv~l~~ 215 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-----------DEVAHTLTENRVLQNSRHPFLTALKY 215 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC------------------------CCCCCSCTTSCCEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhh-----------HHHHHHHHHHHHHHhCCCCeEeeEEE
Confidence 367999999999999999999775 589999999964322111 12356788999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-cCCCCeeccCCCcccEEEcCCCceEE
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHH-DCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
++.+.+..|+||||+++|+|.+++...+. +++..+..++.||+.||+|||+ . ||+||||||+|||++.++.+||
T Consensus 216 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl 290 (446)
T 4ejn_A 216 SFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKI 290 (446)
T ss_dssp EEEETTEEEEEECCCSSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEE
T ss_pred EEeeCCEEEEEEeeCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEE
Confidence 99999999999999999999999977654 8999999999999999999998 7 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
+|||+|+...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 291 ~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~- 365 (446)
T 4ejn_A 291 TDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILMEE- 365 (446)
T ss_dssp CCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-
T ss_pred ccCCCceeccCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHHhCC-
Confidence 9999998643322 223457899999999999999999999999999999999999999975421 11111111100
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRP-----TMKDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RP-----s~~el~~~ 969 (1035)
.......+ ..+.+++.+||++||++|| +++|++++
T Consensus 366 ------~~~p~~~~------~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 366 ------IRFPRTLG------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ------CCCCTTSC------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ------CCCCccCC------HHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 00111111 2234578889999999999 99999874
No 146
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-38 Score=344.49 Aligned_cols=262 Identities=22% Similarity=0.319 Sum_probs=207.2
Q ss_pred hccccCC-eeeeeCCcEEEEEEEC---CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDS-VVGKGCSGIVYRAEME---NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~-~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
++|.+.+ .||+|+||.||+|.+. ++..||||++...... ...+.+.+|++++++++||||+++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~i~~~ 75 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK-------------ADTEEMMREAQIMHQLDNPYIVRL 75 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCH-------------HHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccch-------------hHHHHHHHHHHHHHhCCCCCEeEE
Confidence 4555555 9999999999999754 5788999999754221 125679999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++++ ..+..++||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~k 150 (287)
T 1u59_A 76 IGVC-QAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAK 150 (287)
T ss_dssp EEEE-ESSSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEE
T ss_pred EEEe-cCCCcEEEEEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEE
Confidence 9999 4567899999999999999997543 3489999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccCCc-cccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 842 IADFGLAKLVVEGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
|+|||+++....... ........||+.|+|||+..+..++.++||||||+++|||++ |+.||..... ......+..
T Consensus 151 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~~ 228 (287)
T 1u59_A 151 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQ 228 (287)
T ss_dssp ECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHHT
T ss_pred ECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHhc
Confidence 999999987654322 122234557899999999988889999999999999999998 9999975432 222222221
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREE 979 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 979 (1035)
.. ........+ ..+..++.+||+.||++||++.+++++|+.+......
T Consensus 229 ~~------~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 229 GK------RMECPPECP------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp TC------CCCCCTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred CC------cCCCCCCcC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 11 001111111 2344578889999999999999999999999766654
No 147
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.9e-38 Score=361.57 Aligned_cols=254 Identities=21% Similarity=0.271 Sum_probs=195.7
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC--CCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR--HKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l~~ 763 (1035)
+.|.+.+.||+|+||.||+|...+++.||||++....... ...+.+.+|+.++++++ ||||+++++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~Ei~~l~~l~~~~~~iv~~~~ 123 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN------------QTLDSYRNEIAYLNKLQQHSDKIIRLYD 123 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCH------------HHHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccH------------HHHHHHHHHHHHHHHcccCCCeEEEEEE
Confidence 4689999999999999999988889999999996543221 13567999999999996 599999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++..++..|+||| +.+++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+
T Consensus 124 ~~~~~~~~~lv~E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~ 196 (390)
T 2zmd_A 124 YEITDQYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLI 196 (390)
T ss_dssp EEECSSEEEEEEE-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEEC
T ss_pred EEecCCEEEEEEe-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEE
Confidence 9999999999999 56889999998765 488999999999999999999999 999999999999995 5889999
Q ss_pred eccCccccccCCccccccccCCcccccCCccccc-----------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchh
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-----------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLH 912 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~ 912 (1035)
|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 197 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-- 274 (390)
T 2zmd_A 197 DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-- 274 (390)
T ss_dssp CCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--
T ss_pred ecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH--
Confidence 9999987655433223345689999999998754 468899999999999999999999997532211
Q ss_pred HHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039419 913 IVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMI 970 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L 970 (1035)
..+.. .++.......+... ...+.+++.+||+.||++||++.|++++-
T Consensus 275 --~~~~~------~~~~~~~~~~~~~~--~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 275 --SKLHA------IIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp --HHHHH------HHCTTSCCCCCCCS--CHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --HHHHH------HhCccccCCCCccc--hHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 11111 11111111111111 11234578889999999999999999863
No 148
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=9.4e-38 Score=340.91 Aligned_cols=254 Identities=22% Similarity=0.251 Sum_probs=202.3
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
.++.++|...+.||+|+||+||+|.+.. +..||+|++..... ...+.+.+|++++++++||||++
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~i~~ 70 (277)
T 3f3z_A 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--------------EDVDRFKQEIEIMKSLDHPNIIR 70 (277)
T ss_dssp -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--------------SCHHHHHHHHHHHHTCCCTTBCC
T ss_pred hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--------------chHHHHHHHHHHHHhCCCCCEee
Confidence 3456789999999999999999998764 77899999854321 12567999999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE---cCC
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI---GPE 837 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll---~~~ 837 (1035)
+++++.+.+..|+||||+++++|.+++...+. +++..+..++.|++.||+|||+. +|+||||||+||++ +.+
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 145 (277)
T 3f3z_A 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPD 145 (277)
T ss_dssp EEEEEECSSEEEEEEECCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTT
T ss_pred EEEEEecCCeEEEEEeccCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCC
Confidence 99999999999999999999999999877654 89999999999999999999999 99999999999999 788
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+.+||+|||.+....... ......||+.|+|||+..+ .++.++||||||+++|||++|+.||..... ......+
T Consensus 146 ~~~~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~ 219 (277)
T 3f3z_A 146 SPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD--SEVMLKI 219 (277)
T ss_dssp CCEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH
T ss_pred CcEEEEecccceeccCcc---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH--HHHHHHH
Confidence 999999999998765433 2235679999999998765 489999999999999999999999975422 1111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...... ......... ......++.+||++||++||++.|++++
T Consensus 220 ~~~~~~---~~~~~~~~~------~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 220 REGTFT---FPEKDWLNV------SPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHCCCC---CCHHHHTTS------CHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HhCCCC---CCchhhhcC------CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111000 000000011 1234557888999999999999999874
No 149
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.8e-38 Score=361.66 Aligned_cols=254 Identities=22% Similarity=0.253 Sum_probs=191.7
Q ss_pred HHHhccccC-CeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhc-CCCCcee
Q 039419 683 QVLKCLVED-SVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGS-IRHKNIV 759 (1035)
Q Consensus 683 ~~~~~~~~~-~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv 759 (1035)
.+.+.|... +.||+|+||+||+|.+. +++.||||++.. ...+.+|+.++.+ .+||||+
T Consensus 58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------------------~~~~~~E~~~~~~~~~hp~iv 118 (400)
T 1nxk_A 58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------------------CPKARREVELHWRASQCPHIV 118 (400)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------------------SHHHHHHHHHHHHHTTSTTBC
T ss_pred cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------------------chhHHHHHHHHHHhcCCCCcc
Confidence 345667665 68999999999999776 589999999842 2356788888754 4899999
Q ss_pred eEEeEEEc----CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc
Q 039419 760 RFLGCCWN----RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG 835 (1035)
Q Consensus 760 ~l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~ 835 (1035)
++++++.. .+..|+||||++||+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++
T Consensus 119 ~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~ 195 (400)
T 1nxk_A 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYT 195 (400)
T ss_dssp CEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEES
T ss_pred eEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEe
Confidence 99999875 56789999999999999999876655699999999999999999999999 999999999999999
Q ss_pred C---CCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch-
Q 039419 836 P---EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL- 911 (1035)
Q Consensus 836 ~---~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~- 911 (1035)
. ++.+||+|||+++...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 196 ~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 272 (400)
T 1nxk_A 196 SKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 272 (400)
T ss_dssp SSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC
T ss_pred cCCCCccEEEEecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc
Confidence 7 7899999999998654322 22356799999999999999999999999999999999999999976543211
Q ss_pred -hHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039419 912 -HIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMI 970 (1035)
Q Consensus 912 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L 970 (1035)
.....+..... ..... .....+ ..+.+++.+||+.||++|||+.|++++-
T Consensus 273 ~~~~~~i~~~~~--~~~~~-~~~~~s------~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 273 PGMKTRIRMGQY--EFPNP-EWSEVS------EEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp CSHHHHHHHTCC--CCCTT-TTTTSC------HHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHHcCcc--cCCCc-ccccCC------HHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 11122211110 00000 001111 2245678889999999999999999863
No 150
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.8e-38 Score=347.20 Aligned_cols=261 Identities=27% Similarity=0.392 Sum_probs=192.1
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||+||+|++.. .||||++....... ...+.|.+|+.++++++||||+++++++
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 89 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTP------------QQLQAFKNEVGVLRKTRHVNILLFMGYS 89 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCH------------HHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCH------------HHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 568889999999999999998653 59999996543222 1356799999999999999999999965
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
..+..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 90 -~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 164 (289)
T 3og7_A 90 -TAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDF 164 (289)
T ss_dssp -CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCC
T ss_pred -cCCccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccc
Confidence 5567899999999999999996543 3489999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCcccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|+++...............||+.|+|||++. +..++.++||||||+++|||++|+.||...... ......+.....
T Consensus 165 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~ 243 (289)
T 3og7_A 165 GLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMVGRGSL 243 (289)
T ss_dssp C------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-HHHHHHHHHTSC
T ss_pred eeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-HHHHHHhccccc
Confidence 9998665433223334567999999999876 667888999999999999999999999754322 122222221110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
. ... .......+ ..+..++.+||+.||++||++.++++.|+++.
T Consensus 244 ~-~~~-~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 244 S-PDL-SKVRSNCP------KRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp C-CCT-TSSCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred C-cch-hhccccCC------HHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 0 000 00111111 22345788899999999999999999998864
No 151
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.1e-38 Score=343.16 Aligned_cols=262 Identities=22% Similarity=0.351 Sum_probs=204.0
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC----CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN----GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
.++|...+.||+|+||+||+|.+.. +..||+|++....... ..+.+.+|+.++++++||||++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~~i~~ 77 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD-------------NKEKFMSEAVIMKNLDHPHIVK 77 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHH-------------HHHHHHHHHHHHHHHCCTTBCC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCch-------------HHHHHHHHHHHHHhCCCCCcce
Confidence 3678899999999999999997643 3469999986543221 2568999999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++.+ +..|+||||+++++|.+++...+ ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 78 ~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 152 (281)
T 3cc6_A 78 LIGIIEE-EPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECV 152 (281)
T ss_dssp EEEEECS-SSCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEE
T ss_pred EEEEEcC-CCCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcE
Confidence 9999765 45689999999999999997654 3489999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|||.++....... .......+++.|+|||+..+..++.++||||||+++|||++ |+.||...... .....+..
T Consensus 153 kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~ 229 (281)
T 3cc6_A 153 KLGDFGLSRYIEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEK 229 (281)
T ss_dssp EECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHH
T ss_pred EeCccCCCcccccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhc
Confidence 9999999987654332 12234567889999999988899999999999999999998 99999754322 22222221
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREE 979 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 979 (1035)
... .......+ ..+..++.+||+.||++||++.|++++|+++.....+
T Consensus 230 ~~~------~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 230 GDR------LPKPDLCP------PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp TCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred CCC------CCCCCCCC------HHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 110 00011111 1234578889999999999999999999998765543
No 152
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.9e-38 Score=348.30 Aligned_cols=264 Identities=23% Similarity=0.305 Sum_probs=187.9
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|.+. +++.||+|++...... ...+.+.+|+.++++++||||+++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hp~iv~~~~ 70 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE-------------GTPSTAIREISLMKELKHENIVRLYD 70 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTT-------------CSCHHHHHHHHHHTTCCBTTBCCEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc-------------ccHHHHHHHHHHHHhcCCCCcceEEE
Confidence 357888999999999999999775 5899999998654311 12457889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCC----CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRD----SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE 839 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~ 839 (1035)
++.+++..|+||||++ |+|.+++..... ..+++..+..++.||++||+|||+. ||+||||||+||+++.++.
T Consensus 71 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~ 146 (317)
T 2pmi_A 71 VIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQ 146 (317)
T ss_dssp EECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCC
T ss_pred EEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCC
Confidence 9999999999999997 699999876431 3489999999999999999999999 9999999999999999999
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+.
T Consensus 147 ~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~ 222 (317)
T 2pmi_A 147 LKLGDFGLARAFGIPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--EQLKLIF 222 (317)
T ss_dssp EEECCCSSCEETTSCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHH
T ss_pred EEECcCccceecCCCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHH
Confidence 9999999998764322 12235578999999999876 46899999999999999999999999754321 1111111
Q ss_pred H-hccchhh----------hcccccCCCcccHH----------HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 Q-KRGAIEV----------LDKSLRARPEVEIE----------EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~-~~~~~~~----------~~~~~~~~~~~~~~----------~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. ....... ........+..... ....+.+++.+||++||++|||++|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 223 DIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp HHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 1 1000000 00000000000000 01234568888999999999999999874
No 153
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-38 Score=355.56 Aligned_cols=270 Identities=26% Similarity=0.378 Sum_probs=205.2
Q ss_pred cccCCeeeeeCCcEEEEEEEC-----CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 688 LVEDSVVGKGCSGIVYRAEME-----NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 688 ~~~~~~iG~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
|+..+.||+|+||+||+|.+. +++.||||++...... ...+.+.+|++++++++||||++++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~~ 99 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP-------------QHRSGWKQEIDILRTLYHEHIIKYK 99 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCH-------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccCh-------------HHHHHHHHHHHHHHhCCCcchhhEE
Confidence 488899999999999988653 5889999999754221 1256799999999999999999999
Q ss_pred eEEEcC--CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 763 GCCWNR--NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 763 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++.+. ...++||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~ 173 (318)
T 3lxp_A 100 GCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLV 173 (318)
T ss_dssp EEEEETTTTEEEEEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEecCCCceEEEEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCE
Confidence 999874 56799999999999999997654 89999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCcc-ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH--
Q 039419 841 YIADFGLAKLVVEGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV-- 917 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~-- 917 (1035)
||+|||.++........ .......||..|+|||+..+..++.++||||||+++|||++|+.||............+.
T Consensus 174 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~ 253 (318)
T 3lxp_A 174 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQG 253 (318)
T ss_dssp EECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCH
T ss_pred EECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhccccc
Confidence 99999999876543321 223355688999999999888899999999999999999999999864211000000000
Q ss_pred -HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 918 -RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 918 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
.........+........+.. ....+.+++.+||+.||++||++.|+++.|+.+.....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 254 QMTVLRLTELLERGERLPRPDK--CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HHHHHHHHHHHHTTCCCCCCTT--CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHhcccCCCCCcc--ccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 000000011111111111111 11234567888999999999999999999999876654
No 154
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.9e-38 Score=346.26 Aligned_cols=265 Identities=22% Similarity=0.265 Sum_probs=197.8
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
....++|...+.||+|+||.||+|.+. +++.||+|++........ ...+.+.+|+.++++++||||++
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~hp~iv~ 98 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDP-----------VFRTRMQREARTAGRLQEPHVVP 98 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSH-----------HHHHHHHHHHHHHTTCCCTTBCC
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCH-----------HHHHHHHHHHHHHhhcCCCCeeE
Confidence 344678999999999999999999876 588999999865432211 23578999999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++.+++..|+||||+++++|.+++..... +++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 99 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~ 173 (309)
T 2h34_A 99 IHDFGEIDGQLYVDMRLINGVDLAAMLRRQGP--LAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFA 173 (309)
T ss_dssp EEEEEEETTEEEEEEECCCCEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred EEEEEeeCCeEEEEEEecCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCE
Confidence 99999999999999999999999999987644 89999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHh
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQK 920 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 920 (1035)
||+|||++........ .......|++.|+|||+..+..++.++||||||+++|||++|+.||...... .....+...
T Consensus 174 kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~ 250 (309)
T 2h34_A 174 YLVDFGIASATTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQA 250 (309)
T ss_dssp EECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSC
T ss_pred EEecCccCcccccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccC
Confidence 9999999986654322 2223557999999999999889999999999999999999999999753211 111111110
Q ss_pred ccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHHHH
Q 039419 921 RGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRP-TMKDVAAMIKEIKQ 975 (1035)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RP-s~~el~~~L~~~~~ 975 (1035)
... ........+. .+..++.+||++||++|| +++++++.|+.+..
T Consensus 251 ~~~----~~~~~~~~~~------~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 251 IPR----PSTVRPGIPV------AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp CCC----GGGTSTTCCT------HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred CCC----ccccCCCCCH------HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 000 0011111222 234477789999999999 99999999887643
No 155
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=356.17 Aligned_cols=252 Identities=21% Similarity=0.320 Sum_probs=202.1
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
+..++|...+.||+|+||+||+|.+. +++.||||++............ ....+.+.+|+.++++++||||+++
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~Iv~~ 94 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIE------DPKLGKVTLEIAILSRVEHANIIKV 94 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEE------ETTTEEEEHHHHHHTTCCCTTBCCE
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccc------hHHHHHHHHHHHHHHhCCCCCEeeE
Confidence 45688999999999999999999765 5899999999765432211000 0123456789999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCC-ChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 762 LGCCWNRNTRLLMYDYMPNG-SLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
++++.+.+..++||||+.+| +|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 95 ~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~--l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 169 (335)
T 3dls_A 95 LDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR--LDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTI 169 (335)
T ss_dssp EEEEECSSEEEEEEECCTTSCBHHHHHHTCCC--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCE
T ss_pred EEEEeeCCEEEEEEEeCCCCccHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcE
Confidence 99999999999999999776 99999976544 89999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|||+++....... .....||+.|+|||+..+..+ +.++|||||||++|||++|+.||.....
T Consensus 170 kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------- 235 (335)
T 3dls_A 170 KLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------- 235 (335)
T ss_dssp EECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------
T ss_pred EEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------
Confidence 9999999987654332 234679999999999887776 7899999999999999999999964210
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
........ +.. .. ..+..++.+||++||++||++++++++
T Consensus 236 ------~~~~~~~~-~~~-~~--~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 ------TVEAAIHP-PYL-VS--KELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ------GTTTCCCC-SSC-CC--HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ------HHhhccCC-Ccc-cC--HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111111 110 11 123457888999999999999999885
No 156
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.7e-38 Score=347.98 Aligned_cols=263 Identities=24% Similarity=0.367 Sum_probs=203.0
Q ss_pred hccccCCeeeeeCCcEEEEEEE-----CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEM-----ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
+.|+..+.||+|+||.||+|++ .+++.||||++...... ...+.+.+|+.++++++||||++
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~i~~ 87 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG-------------NHIADLKKEIEILRNLYHENIVK 87 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------------------CCHHHHHHHHHHHHTCCCTTBCC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccc-------------hhHHHHHHHHHHHHhCCCCCeee
Confidence 5588899999999999999984 35899999999754321 12567999999999999999999
Q ss_pred EEeEEEcC--CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 761 FLGCCWNR--NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 761 l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
+++++.+. ...++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 88 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~ 163 (302)
T 4e5w_A 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEH 163 (302)
T ss_dssp EEEEEEC---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred eeeEEecCCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCC
Confidence 99999876 56899999999999999996654 3389999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCccccccCCcc-ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCC---------
Q 039419 839 EPYIADFGLAKLVVEGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIP--------- 908 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~--------- 908 (1035)
.+||+|||.++........ .......||..|+|||+..+..++.++||||+|+++|||++|+.|+.....
T Consensus 164 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 243 (302)
T 4e5w_A 164 QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPT 243 (302)
T ss_dssp EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC
T ss_pred CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCc
Confidence 9999999999876544321 223456788999999999888899999999999999999999998753210
Q ss_pred -CchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 909 -EGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 909 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
.......... .+........+... ...+.+++.+||+.||++|||+.++++.|+++.
T Consensus 244 ~~~~~~~~~~~-------~~~~~~~~~~~~~~--~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 244 HGQMTVTRLVN-------TLKEGKRLPCPPNC--PDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CGGGHHHHHHH-------HHHTTCCCCCCTTC--CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccccCHHHHHH-------HHhccCCCCCCCCC--CHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0000000000 00000011111111 123456788899999999999999999998864
No 157
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=349.01 Aligned_cols=264 Identities=21% Similarity=0.336 Sum_probs=196.8
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|.+.. |+.||||++....... ...+.+.+|+.++++++||||+++++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~i~~~~~ 69 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDP------------VIKKIALREIRMLKQLKHPNLVNLLE 69 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-H------------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccch------------HHHHHHHHHHHHHHhCCCCCccchhh
Confidence 4679999999999999999998764 8999999986543221 23567889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..++||||+++++|.+++...+. +++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 70 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~ 144 (311)
T 4agu_A 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRG--VPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLC 144 (311)
T ss_dssp EEEETTEEEEEEECCSEEHHHHHHHTSSC--CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeecCCeEEEEEEeCCCchHHHHHhhhcC--CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEe
Confidence 99999999999999999999998876544 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|||.++...... .......||+.|+|||+..+ ..++.++||||+|+++|+|++|+.||...... .....+.....
T Consensus 145 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~ 220 (311)
T 4agu_A 145 DFGFARLLTGPS--DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYLIRKTLG 220 (311)
T ss_dssp CCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHC
T ss_pred eCCCchhccCcc--cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhc
Confidence 999998764332 12235578999999998865 66899999999999999999999999754321 11111111100
Q ss_pred c-h----------hhhcc-cccCCCc-ccH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 923 A-I----------EVLDK-SLRARPE-VEI-----EEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 923 ~-~----------~~~~~-~~~~~~~-~~~-----~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. . ..... ....... ... .......+++.+||++||++|||++|++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 221 DLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp SCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0 00000 0000000 000 011124568889999999999999999874
No 158
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-37 Score=347.42 Aligned_cols=271 Identities=27% Similarity=0.355 Sum_probs=202.9
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC--CCCceee
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI--RHKNIVR 760 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~ 760 (1035)
.+.++|.+.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++... +||||++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----------------~~~~~~~e~~~~~~~~~~h~~i~~ 95 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----------------EEASWFRETEIYQTVLMRHENILG 95 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----------------GHHHHHHHHHHHTSTTCCCTTBCC
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----------------ccchhhhHHHHHHHHhhcCCCeee
Confidence 34588999999999999999999887 899999998432 133456666776665 8999999
Q ss_pred EEeEEEcC----CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccC-----CCCeeccCCCccc
Q 039419 761 FLGCCWNR----NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDC-----VPPIVHRDIKANN 831 (1035)
Q Consensus 761 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivHrDikp~N 831 (1035)
+++++.+. ...|+||||+++|+|.++++... +++..+..++.|++.||+|||+.+ .++|+||||||+|
T Consensus 96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~N 172 (337)
T 3mdy_A 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKN 172 (337)
T ss_dssp EEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGG
T ss_pred EEEEEccCCCCCCceEEEEeccCCCcHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHH
Confidence 99999887 67899999999999999997643 899999999999999999999751 2389999999999
Q ss_pred EEEcCCCceEEeeccCccccccCCcc--ccccccCCcccccCCcccccCCCCcc------ccchhHHHHHHHHHhC----
Q 039419 832 ILIGPEFEPYIADFGLAKLVVEGDFA--RSSNTVAGSYGYIAPEYGYMMKITEK------SDVYSYGVVVLEVLTG---- 899 (1035)
Q Consensus 832 Ill~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~SlGvvl~elltg---- 899 (1035)
|+++.++.+||+|||+++........ .......||+.|+|||++.+...+.+ +|||||||++|||++|
T Consensus 173 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~ 252 (337)
T 3mdy_A 173 ILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252 (337)
T ss_dssp EEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcc
Confidence 99999999999999999766443221 11234579999999999887766665 9999999999999999
Q ss_pred ------CCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 039419 900 ------KQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEI 973 (1035)
Q Consensus 900 ------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~ 973 (1035)
+.||....+.......+...... ....+....... .......+.+++.+||+.||++||++.|++++|+.+
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 253 GIVEEYQLPYHDLVPSDPSYEDMREIVCI--KKLRPSFPNRWS-SDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp TBCCCCCCTTTTTSCSSCCHHHHHHHHTT--SCCCCCCCGGGG-GSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccccccHhhhcCCCCchhhhHHHHhh--hccCccccccch-hhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 66665543333222222111100 000111110000 112333456788999999999999999999999998
Q ss_pred HHhH
Q 039419 974 KQER 977 (1035)
Q Consensus 974 ~~~~ 977 (1035)
.+..
T Consensus 330 ~~~~ 333 (337)
T 3mdy_A 330 SESQ 333 (337)
T ss_dssp HHTT
T ss_pred Hhhc
Confidence 6543
No 159
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=7.5e-39 Score=358.54 Aligned_cols=275 Identities=27% Similarity=0.379 Sum_probs=204.2
Q ss_pred hccccCCeeeeeCCcEEEEEEE-----CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEM-----ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
++|+..+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|++++++++||||++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~i~~ 88 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP--------------DQQRDFQREIQILKALHSDFIVK 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH--------------HHHHHHHHHHHHHHTCCCTTBCC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH--------------HHHHHHHHHHHHHHhcCCCceeE
Confidence 5788999999999999999984 3588999999865321 12467899999999999999999
Q ss_pred EEeEEEc--CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 761 FLGCCWN--RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 761 l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
+++++.. ....|+||||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 89 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~ 164 (327)
T 3lxl_A 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEA 164 (327)
T ss_dssp EEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred EEEEEecCCCceEEEEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCC
Confidence 9999874 4568999999999999999976432 389999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCccccccCCc-cccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
.+||+|||.++....... ........||+.|+|||++.+..++.++||||||+++|+|++|+.||............+.
T Consensus 165 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~ 244 (327)
T 3lxl_A 165 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE 244 (327)
T ss_dssp EEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC--
T ss_pred CEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc
Confidence 999999999987654322 1223345688999999999888899999999999999999999999864211000000000
Q ss_pred HHh---ccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHHh
Q 039419 918 RQK---RGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREEC 980 (1035)
Q Consensus 918 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~~ 980 (1035)
... ......+........+.. ....+.+++.+||++||++||++.|++++|+.+......+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 245 RDVPALSRLLELLEEGQRLPAPPA--CPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp --CCHHHHHHHHHHTTCCCCCCTT--CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cccccHHHHHHHhhcccCCCCCCc--ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 000 000001111111111111 1122355788899999999999999999999886655443
No 160
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.2e-38 Score=348.90 Aligned_cols=262 Identities=23% Similarity=0.381 Sum_probs=195.3
Q ss_pred hccccCCeeeeeCCcEEEEEEEC----CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME----NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
++|...+.||+|+||.||+|.+. .++.||+|++....... ...+.+.+|+.++++++||||+++
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~ 101 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ------------REIEEFLSEAACMKDFSHPNVIRL 101 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCH------------HHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccch------------hHHHHHHHHHHHHhcCCCCCeeee
Confidence 67889999999999999999664 24589999986543221 124678999999999999999999
Q ss_pred EeEEEcCCc-----ceEEEEeCCCCChhhhhhhc----CCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccE
Q 039419 762 LGCCWNRNT-----RLLMYDYMPNGSLGSLLHER----RDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNI 832 (1035)
Q Consensus 762 ~~~~~~~~~-----~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NI 832 (1035)
++++.+.+. .++||||+++|+|.+++... ....+++..++.++.||++||+|||+. +|+||||||+||
T Consensus 102 ~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NI 178 (313)
T 3brb_A 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNC 178 (313)
T ss_dssp CEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGE
T ss_pred eEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceE
Confidence 999987553 49999999999999998532 234589999999999999999999999 999999999999
Q ss_pred EEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCch
Q 039419 833 LIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGL 911 (1035)
Q Consensus 833 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~ 911 (1035)
+++.++.+||+|||+++...............+++.|+|||...+..++.++||||||+++|||++ |..||......
T Consensus 179 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-- 256 (313)
T 3brb_A 179 MLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-- 256 (313)
T ss_dssp EECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--
T ss_pred EEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--
Confidence 999999999999999987655443333445568889999999999899999999999999999999 88999754322
Q ss_pred hHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 912 HIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
.....+.... ........+ ..+..++.+||+.||++||++.+++++|+.+...
T Consensus 257 ~~~~~~~~~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 257 EMYDYLLHGH------RLKQPEDCL------DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp GHHHHHHTTC------CCCCBTTCC------HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCC------CCCCCcccc------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 2222221110 000111111 2345578889999999999999999999998654
No 161
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.8e-38 Score=365.06 Aligned_cols=261 Identities=23% Similarity=0.227 Sum_probs=193.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|.+. +++.||||++....... ...+++.+|+.+++.++||||+++++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~l~~ 128 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ------------THAKRAYRELVLMKCVNHKNIISLLN 128 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSH------------HHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccCh------------HHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 478999999999999999999765 58999999996532111 23567889999999999999999999
Q ss_pred EEEcCC------cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 764 CCWNRN------TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 764 ~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
++...+ ..|+||||+++ ++.+.+.. .+++..+..++.||+.||+|||+. ||+||||||+|||++.+
T Consensus 129 ~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~ 200 (464)
T 3ttj_A 129 VFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSD 200 (464)
T ss_dssp EECSCCSTTTCCEEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred EEccCCccccCCeEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCC
Confidence 997654 45999999965 56666643 288999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+.+||+|||+|+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... ..+...+
T Consensus 201 ~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~ 276 (464)
T 3ttj_A 201 CTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVI 276 (464)
T ss_dssp SCEEECCCCCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred CCEEEEEEEeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 999999999998764432 234578999999999999999999999999999999999999999754211 1111111
Q ss_pred HHhccc-hhhh-----------c---------------cc-ccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGA-IEVL-----------D---------------KS-LRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~-~~~~-----------~---------------~~-~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...... .+.. . .. ..............+.+++.+||+.||++|||++|++++
T Consensus 277 ~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 277 EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 110000 0000 0 00 000000001113356778999999999999999999885
No 162
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=9.2e-38 Score=355.25 Aligned_cols=252 Identities=15% Similarity=0.144 Sum_probs=202.2
Q ss_pred hccccCCeeeeeCCcEEEEEE------ECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC---CC
Q 039419 686 KCLVEDSVVGKGCSGIVYRAE------MENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR---HK 756 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp 756 (1035)
++|.+.+.||+|+||+||+|. ..+++.||||++... ....+.+|++++++++ |+
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----------------~~~~~~~e~~~~~~l~~~~~~ 127 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----------------NPWEFYIGTQLMERLKPSMQH 127 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----------------CHHHHHHHHHHHHHSCGGGGG
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----------------ChhHHHHHHHHHHHhhhhhhh
Confidence 678899999999999999993 446899999998642 2456888999988887 99
Q ss_pred ceeeEEeEEEcCCcceEEEEeCCCCChhhhhhhc---CCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEE
Q 039419 757 NIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHER---RDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNIL 833 (1035)
Q Consensus 757 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIl 833 (1035)
||+++++++...+..|+||||+++|+|.+++... ....+++..+..++.||++||+|||+. +|+||||||+|||
T Consensus 128 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIl 204 (365)
T 3e7e_A 128 MFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFI 204 (365)
T ss_dssp GBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEE
T ss_pred hhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999999753 234599999999999999999999998 9999999999999
Q ss_pred EcC-----------CCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 039419 834 IGP-----------EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQP 902 (1035)
Q Consensus 834 l~~-----------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P 902 (1035)
++. ++.+||+|||+|+..............+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 205 l~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p 284 (365)
T 3e7e_A 205 LGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM 284 (365)
T ss_dssp ECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCC
T ss_pred ecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCc
Confidence 998 899999999999765433323334567899999999999999999999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHHHHHHh
Q 039419 903 IDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDR-PTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~R-Ps~~el~~~L~~~~~~ 976 (1035)
|....... ..........+. .+ ..-.++..|++.+|.+| |+++++.+.|+++...
T Consensus 285 f~~~~~~~--------------~~~~~~~~~~~~---~~--~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 285 KVKNEGGE--------------CKPEGLFRRLPH---LD--MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp CEEEETTE--------------EEECSCCTTCSS---HH--HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccCCCCc--------------eeechhccccCc---HH--HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 96432110 001111111111 11 12346777999999999 7888888888876544
No 163
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.4e-37 Score=340.82 Aligned_cols=254 Identities=21% Similarity=0.269 Sum_probs=202.7
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +++.||+|++....... ...+.+.+|+.++++++||||+++++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~i~~~~~ 72 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA------------RDFQKLEREARICRKLQHPNIVRLHD 72 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCH------------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCH------------HHHHHHHHHHHHHHHcCCCCcCeEEE
Confidence 467899999999999999999776 58999999986543221 12467889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc---e
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE---P 840 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~---~ 840 (1035)
++.+.+..++||||+++++|.+++..... +++..+..++.|++.||+|||+. +|+||||||+||+++.++. +
T Consensus 73 ~~~~~~~~~~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~ 147 (284)
T 3kk8_A 73 SIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAV 147 (284)
T ss_dssp EEECSSEEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCE
T ss_pred EEEcCCEEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcE
Confidence 99999999999999999999999877654 89999999999999999999999 9999999999999986655 9
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHh
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQK 920 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 920 (1035)
||+|||.+....... ......||+.|+|||+..+..++.++||||+|+++|+|++|+.||..... ......+...
T Consensus 148 kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~ 222 (284)
T 3kk8_A 148 KLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAG 222 (284)
T ss_dssp EECCCTTCEECCSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT
T ss_pred EEeeceeeEEcccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHHHHHHHhc
Confidence 999999997664432 22356799999999999999999999999999999999999999965421 1111111111
Q ss_pred ccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 921 RGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. ....+. ....+ ....+++.+||++||++||+++|++++
T Consensus 223 ~~--~~~~~~-~~~~~------~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 223 AY--DYPSPE-WDTVT------PEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CC--CCCTTT-TTTSC------HHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred cc--cCCchh-hcccC------HHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 10 000000 01111 123457888999999999999999885
No 164
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=348.24 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=192.5
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~ 762 (1035)
.++|+..+.||+|+||+||+|++. +++.||||++........ ....+.+|+..+.++ +||||++++
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~------------~~~~~~~e~~~~~~~~~h~~iv~l~ 123 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPK------------DRARKLAEVGSHEKVGQHPCCVRLE 123 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChH------------HHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 478999999999999999999886 699999999865432221 134555666666665 899999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+.+..|+||||+ +++|.+++...+ ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 124 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl 198 (311)
T 3p1a_A 124 QAWEEGGILYLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKL 198 (311)
T ss_dssp EEEEETTEEEEEEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEE
T ss_pred EEEEeCCEEEEEEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999 779999887654 3489999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+... .. |......
T Consensus 199 ~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~-----~~--~~~~~~~ 267 (311)
T 3p1a_A 199 GDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-----EG--WQQLRQG 267 (311)
T ss_dssp CCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH-----HH--HHHHTTT
T ss_pred ccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc-----cH--HHHHhcc
Confidence 9999998664432 2335679999999998776 7899999999999999999997766421 11 1111100
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..........+ ..+.+++.+||++||++|||++|++++
T Consensus 268 ---~~~~~~~~~~~------~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 268 ---YLPPEFTAGLS------SELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ---CCCHHHHTTSC------HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---CCCcccccCCC------HHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 01111111111 234557888999999999999999874
No 165
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.4e-38 Score=371.39 Aligned_cols=254 Identities=19% Similarity=0.265 Sum_probs=202.6
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
+.|...+.||+|+||.||+|+++ +|+.||||++........ ...+.+.+|++++++++||||++++++
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~-----------~~~~~~~~E~~iL~~l~hp~Iv~l~~~ 253 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR-----------KGYQGAMVEKKILAKVHSRFIVSLAYA 253 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhh-----------HHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 56888899999999999999886 589999999965332211 234678999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERR--DSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+.+.+..|+||||++||+|.+++.... ...+++..+..++.||+.||+|||+. ||+||||||+||+++.+|.+||
T Consensus 254 ~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL 330 (543)
T 3c4z_A 254 FETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRI 330 (543)
T ss_dssp EECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEE
T ss_pred EeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEE
Confidence 999999999999999999999987654 34589999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCc--hhHHHHHHHh
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEG--LHIVDWVRQK 920 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~--~~~~~~~~~~ 920 (1035)
+|||+++....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+...+...
T Consensus 331 ~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~ 408 (543)
T 3c4z_A 331 SDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408 (543)
T ss_dssp CCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC
T ss_pred eecceeeeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc
Confidence 99999987654332 2234689999999999999999999999999999999999999997643211 1111111110
Q ss_pred ccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 039419 921 RGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTM-----KDVAA 968 (1035)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~-----~el~~ 968 (1035)
........+ .....++.+||++||++||++ +++++
T Consensus 409 -------~~~~p~~~s------~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 409 -------AVTYPDKFS------PASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp -------CCCCCTTSC------HHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred -------ccCCCcccC------HHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 000111111 123457788999999999975 56655
No 166
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.5e-38 Score=353.91 Aligned_cols=267 Identities=22% Similarity=0.203 Sum_probs=201.5
Q ss_pred cHHHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCce
Q 039419 680 TVEQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNI 758 (1035)
Q Consensus 680 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni 758 (1035)
.+.++.++|...+.||+|+||+||+|.+. +++.||+|++........ .....+.+.+|+.++++++||||
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~---------~~~~~~~~~~E~~~l~~l~hpni 90 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQI---------NPKDVERIKTEVRLMKKLHHPNI 90 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC------------CHHHHHHHHHHHHHHCCCTTB
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhccc---------CHHHHHHHHHHHHHHHhCCCCCc
Confidence 57888999999999999999999999775 588999999865322110 01235789999999999999999
Q ss_pred eeEEeEEEcCCcceEEEEeCCCCChhhhhhhcC--------------------------------------CCCCCHHHH
Q 039419 759 VRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERR--------------------------------------DSCLEWELR 800 (1035)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~ 800 (1035)
+++++++.+.+..++||||++||+|.+++.... ...+++..+
T Consensus 91 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (345)
T 3hko_A 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLI 170 (345)
T ss_dssp CCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHH
T ss_pred ceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHH
Confidence 999999999999999999999999999985211 112356778
Q ss_pred HHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC--ceEEeeccCccccccCCc--cccccccCCcccccCCcccc
Q 039419 801 YRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF--EPYIADFGLAKLVVEGDF--ARSSNTVAGSYGYIAPEYGY 876 (1035)
Q Consensus 801 ~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~--~~kl~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~ 876 (1035)
..++.||++||+|||+. +|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||++.
T Consensus 171 ~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 247 (345)
T 3hko_A 171 SNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLN 247 (345)
T ss_dssp HHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHT
T ss_pred HHHHHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhc
Confidence 88999999999999999 999999999999998776 899999999986644221 11234567999999999876
Q ss_pred c--CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccC
Q 039419 877 M--MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVN 954 (1035)
Q Consensus 877 ~--~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~ 954 (1035)
+ ..++.++||||||+++|||++|+.||...... .....+.. .......+........+.+++.+||+
T Consensus 248 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~~li~~~l~ 316 (345)
T 3hko_A 248 TTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA--DTISQVLN---------KKLCFENPNYNVLSPLARDLLSNLLN 316 (345)
T ss_dssp CSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---------CCCCTTSGGGGGSCHHHHHHHHHHSC
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH--HHHHHHHh---------cccccCCcccccCCHHHHHHHHHHcC
Confidence 5 67889999999999999999999999754221 11111111 11100000000011233457888999
Q ss_pred CCCCCCCCHHHHHHH
Q 039419 955 PTPDDRPTMKDVAAM 969 (1035)
Q Consensus 955 ~dP~~RPs~~el~~~ 969 (1035)
+||++||++.|++++
T Consensus 317 ~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 317 RNVDERFDAMRALQH 331 (345)
T ss_dssp SCTTTSCCHHHHHHS
T ss_pred CChhHCCCHHHHhcC
Confidence 999999999999884
No 167
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.8e-38 Score=355.43 Aligned_cols=198 Identities=23% Similarity=0.285 Sum_probs=175.7
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-----CCce
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-----HKNI 758 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----hpni 758 (1035)
.++|.+.+.||+|+||+||+|++. +++.||||++.... ...+.+.+|+.+++.++ ||||
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK---------------KYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH---------------HHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch---------------hhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 378999999999999999999875 58999999985321 12456788999999986 9999
Q ss_pred eeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC--
Q 039419 759 VRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP-- 836 (1035)
Q Consensus 759 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~-- 836 (1035)
+++++++...+..++||||+ +++|.+++.......+++..+..++.||+.||+|||+. ||+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPY 174 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTT
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccc
Confidence 99999999999999999999 99999999887666699999999999999999999999 9999999999999975
Q ss_pred -----------------------CCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHH
Q 039419 837 -----------------------EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVV 893 (1035)
Q Consensus 837 -----------------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl 893 (1035)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 789999999999864332 2356799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC
Q 039419 894 LEVLTGKQPIDPT 906 (1035)
Q Consensus 894 ~elltg~~P~~~~ 906 (1035)
|||++|+.||...
T Consensus 250 ~ell~g~~pf~~~ 262 (360)
T 3llt_A 250 AELYTGSLLFRTH 262 (360)
T ss_dssp HHHHHSSCSCCCS
T ss_pred HHHHHCCCCCCCC
Confidence 9999999999754
No 168
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.3e-38 Score=363.91 Aligned_cols=258 Identities=22% Similarity=0.247 Sum_probs=200.6
Q ss_pred hccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...++||+|+||+||+|+++. ++.||||++........ ...+.+.+|+.++..++||||++++++
T Consensus 74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~-----------~~~~~~~~E~~il~~~~hp~Iv~l~~~ 142 (437)
T 4aw2_A 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKR-----------AETACFREERDVLVNGDSKWITTLHYA 142 (437)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHT-----------TTTCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhH-----------HHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 689999999999999999998875 78999999864322111 113358899999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||++||+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 143 ~~~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 143 FQDDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp EECSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred EeeCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 999999999999999999999997642 3489999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY-----MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|+....... ......+||+.|+|||++. ...++.++|||||||++|||++|+.||...... .....+..
T Consensus 219 FGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~ 295 (437)
T 4aw2_A 219 FGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKIMN 295 (437)
T ss_dssp CTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHT
T ss_pred hhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--HHHHhhhh
Confidence 999987654332 2233568999999999976 556899999999999999999999999754221 11111110
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDD--RPTMKDVAAM 969 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~--RPs~~el~~~ 969 (1035)
.. ..+ ....... .+. ....+++.+|+..+|++ ||+++|++++
T Consensus 296 ~~---~~~--~~p~~~~-~~s--~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 296 HK---ERF--QFPTQVT-DVS--ENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HH---HHC--CCCSSCC-CSC--HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cc---ccc--cCCcccc-cCC--HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00 000 0111100 011 12345677788888888 9999999885
No 169
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.8e-38 Score=352.75 Aligned_cols=253 Identities=21% Similarity=0.224 Sum_probs=198.4
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceee
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVR 760 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~ 760 (1035)
...++|...+.||+|+||.||+|.++ +++.||||++..... .+.+|++++.++ +||||++
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------------~~~~E~~~l~~~~~hp~iv~ 80 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------------------DPTEEIEILLRYGQHPNIIT 80 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------------------CCHHHHHHHHHHTTSTTBCC
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------------------ChHHHHHHHHHhcCCCCcCe
Confidence 34678999999999999999999876 589999999964321 234688888888 7999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC---
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE--- 837 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~--- 837 (1035)
+++++.+.+..|+||||++||+|.+++...+ .+++..+..++.||+.||+|||+. ||+||||||+||++..+
T Consensus 81 ~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~ 155 (342)
T 2qr7_A 81 LKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGN 155 (342)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCS
T ss_pred EEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCC
Confidence 9999999999999999999999999997654 389999999999999999999999 99999999999998543
Q ss_pred -CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCc-hhHHH
Q 039419 838 -FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEG-LHIVD 915 (1035)
Q Consensus 838 -~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~-~~~~~ 915 (1035)
+.+||+|||+++...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+..
T Consensus 156 ~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~ 233 (342)
T 2qr7_A 156 PESIRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA 233 (342)
T ss_dssp GGGEEECCCTTCEECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHH
T ss_pred cCeEEEEECCCcccCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHH
Confidence 359999999998765432 12335679999999999888788999999999999999999999997542221 11222
Q ss_pred HHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 916 WVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.+..... ..........+ ..+.+++.+||++||++||++.|++++
T Consensus 234 ~i~~~~~---~~~~~~~~~~s------~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 234 RIGSGKF---SLSGGYWNSVS------DTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHHHCCC---CCCSTTTTTSC------HHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHccCCc---ccCccccccCC------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 2211100 00000011111 123457888999999999999999885
No 170
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-38 Score=344.67 Aligned_cols=254 Identities=25% Similarity=0.324 Sum_probs=196.1
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
+.++|...+.||+|+||+||+|+.. +++.||+|++...... ...+.+.+|++++++++||||++++
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hp~iv~~~ 86 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-------------VPMEQIEAEIEVLKSLDHPNIIKIF 86 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC-------------SCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc-------------hhHHHHHHHHHHHHhCCCchHHhHH
Confidence 4578999999999999999999775 5899999998653221 1256899999999999999999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE---cCC
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHER--RDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI---GPE 837 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll---~~~ 837 (1035)
+++.+.+..|+||||+++|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||++ +.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~ 163 (285)
T 3is5_A 87 EVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPH 163 (285)
T ss_dssp EEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTT
T ss_pred HheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCC
Confidence 9999999999999999999999998653 234589999999999999999999999 99999999999999 456
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+.+||+|||+++...... ......||+.|+|||++. ..++.++||||||+++|||++|+.||...... ......
T Consensus 164 ~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~ 237 (285)
T 3is5_A 164 SPIKIIDFGLAELFKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKA 237 (285)
T ss_dssp CCEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH
T ss_pred CCEEEEeeecceecCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhh
Confidence 789999999998664432 223567999999999875 56889999999999999999999999754221 111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... .......... .....+++.+||++||++||++.|++++
T Consensus 238 ~~~~-------~~~~~~~~~~---~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 238 TYKE-------PNYAVECRPL---TPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHCC-------CCCCC--CCC---CHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ccCC-------cccccccCcC---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110 0000000000 1123457888999999999999999864
No 171
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=358.15 Aligned_cols=264 Identities=18% Similarity=0.194 Sum_probs=205.7
Q ss_pred hccccCCeeeeeCCcEEEEEEECC---------CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCC
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN---------GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHK 756 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp 756 (1035)
++|...+.||+|+||.||+|++.. ++.||||++... +.+.+|+.++++++||
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------------------~~~~~E~~~l~~l~h~ 102 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------------------GRLFNEQNFFQRAAKP 102 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------------------STHHHHHHHHHHHCCH
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------------------chHHHHHHHHHHhccc
Confidence 689999999999999999998764 789999998532 2578999999999999
Q ss_pred ceee---------------EEeEEEc-CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCC
Q 039419 757 NIVR---------------FLGCCWN-RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVP 820 (1035)
Q Consensus 757 niv~---------------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~ 820 (1035)
||++ +++++.. .+..|+||||+ +++|.+++.......+++..+..++.||+.||+|||+.
T Consensus 103 niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--- 178 (352)
T 2jii_A 103 LQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN--- 178 (352)
T ss_dssp HHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred chhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 9987 6777776 67889999999 99999999876445599999999999999999999999
Q ss_pred CeeccCCCcccEEEcCCC--ceEEeeccCccccccCCcc-----ccccccCCcccccCCcccccCCCCccccchhHHHHH
Q 039419 821 PIVHRDIKANNILIGPEF--EPYIADFGLAKLVVEGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVV 893 (1035)
Q Consensus 821 ~ivHrDikp~NIll~~~~--~~kl~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl 893 (1035)
+|+||||||+||+++.++ .+||+|||+++........ .......||+.|+|||+..+..++.++|||||||++
T Consensus 179 ~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 258 (352)
T 2jii_A 179 EYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCM 258 (352)
T ss_dssp TCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHH
Confidence 999999999999999998 8999999999876543211 112345799999999999998999999999999999
Q ss_pred HHHHhCCCCCCCCCCCchhHHHHHHHhccch-hhhcccc-cCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Q 039419 894 LEVLTGKQPIDPTIPEGLHIVDWVRQKRGAI-EVLDKSL-RARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIK 971 (1035)
Q Consensus 894 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~ 971 (1035)
|||++|+.||....+....+........... ....... ....+ ..+..++.+||+.||++||+++++++.|+
T Consensus 259 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 259 LKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPS------ETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp HHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCc------HHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 9999999999865433322222222111000 0000000 00111 22345778899999999999999999999
Q ss_pred HHHHhHH
Q 039419 972 EIKQERE 978 (1035)
Q Consensus 972 ~~~~~~~ 978 (1035)
++.....
T Consensus 333 ~~~~~~~ 339 (352)
T 2jii_A 333 ALLQDLR 339 (352)
T ss_dssp HHHHHTT
T ss_pred HHHHhcC
Confidence 9876554
No 172
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-37 Score=347.85 Aligned_cols=260 Identities=20% Similarity=0.258 Sum_probs=201.9
Q ss_pred HHHHHhccccC-CeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCc
Q 039419 681 VEQVLKCLVED-SVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKN 757 (1035)
Q Consensus 681 ~~~~~~~~~~~-~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpn 757 (1035)
.+...+.|.+. +.||+|+||.||+|.+. +++.||+|++....... .....+.+|+.++++++ |||
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~~~~~ 90 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ------------DCRAEILHEIAVLELAKSCPR 90 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE------------ECHHHHHHHHHHHHHTTTCTT
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch------------HHHHHHHHHHHHHHhccCCCC
Confidence 45566778777 89999999999999776 58999999986533221 23568999999999995 699
Q ss_pred eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC-
Q 039419 758 IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP- 836 (1035)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~- 836 (1035)
|+++++++.+.+..|+||||+++|+|.+++.......+++..+..++.|++.||+|||+. ||+||||||+||+++.
T Consensus 91 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~ 167 (327)
T 3lm5_A 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSI 167 (327)
T ss_dssp BCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCB
T ss_pred EEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecC
Confidence 999999999999999999999999999999766556699999999999999999999999 9999999999999987
Q ss_pred --CCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHH
Q 039419 837 --EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIV 914 (1035)
Q Consensus 837 --~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~ 914 (1035)
++.+||+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ...
T Consensus 168 ~~~~~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~ 242 (327)
T 3lm5_A 168 YPLGDIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--ETY 242 (327)
T ss_dssp TTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH
T ss_pred CCCCcEEEeeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHH
Confidence 7899999999998764432 223467999999999999999999999999999999999999999754221 111
Q ss_pred HHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 915 DWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..+..... . .........+ ..+.+++.+||++||++||+++|++++
T Consensus 243 ~~i~~~~~--~-~~~~~~~~~~------~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 243 LNISQVNV--D-YSEETFSSVS------QLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHTCC--C-CCTTTTTTSC------HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHhccc--c-cCchhhcccC------HHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11111100 0 0000001111 123457888999999999999999874
No 173
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-38 Score=357.60 Aligned_cols=261 Identities=26% Similarity=0.384 Sum_probs=193.3
Q ss_pred hccccCCeeeeeCCcEEEEEEEC--CC--cEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME--NG--EVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
..|...+.||+|+||+||+|.+. ++ ..||||.+...... ...++|.+|+.++++++||||+++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~il~~l~hpnIv~~ 155 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-------------GEVSQFLTEGIIMKDFSHPNVLSL 155 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCS-------------HHHHHHHHHHTTSTTCCCTTBCCC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCH-------------HHHHHHHHHHHHHHhCCCCCcceE
Confidence 34667789999999999999764 22 46899988542211 235689999999999999999999
Q ss_pred EeEEEc-CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 762 LGCCWN-RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 762 ~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
++++.+ ++..|+||||+++|+|.++++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+
T Consensus 156 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~ 231 (373)
T 3c1x_A 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTV 231 (373)
T ss_dssp CEEECCCSSCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred EEEEEcCCCCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCE
Confidence 998764 457899999999999999997543 3478999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCcc--ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHH
Q 039419 841 YIADFGLAKLVVEGDFA--RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~ 917 (1035)
||+|||+++........ .......+|+.|+|||+..+..++.++|||||||++|||++ |..||....... ....+
T Consensus 232 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~ 309 (373)
T 3c1x_A 232 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYL 309 (373)
T ss_dssp EECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHH
T ss_pred EEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHH
Confidence 99999999866443221 12234567889999999999999999999999999999999 677776543322 22222
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
...... ......+ ..+..++.+||+.||++||++.|+++.|+++....
T Consensus 310 ~~~~~~------~~p~~~~------~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 310 LQGRRL------LQPEYCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp HTTCCC------CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred HcCCCC------CCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 211100 0011111 12345788899999999999999999999986543
No 174
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.4e-38 Score=359.56 Aligned_cols=206 Identities=30% Similarity=0.407 Sum_probs=164.9
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCcee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKNIV 759 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv 759 (1035)
..+.++|...+.||+|+||+||+|.+. +++.||||++....... ...+++.+|+.+++++. ||||+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~------------~~~~~~~~E~~~l~~l~~h~niv 72 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS------------TDAQRTFREIMILTELSGHENIV 72 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCH------------HHHHHHHHHHHHHHHTTTCTTBC
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccCh------------HHHHHHHHHHHHHHhccCCCCCC
Confidence 356789999999999999999999765 58999999986432211 12467889999999997 99999
Q ss_pred eEEeEEEcCC--cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 760 RFLGCCWNRN--TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 760 ~l~~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
++++++..++ ..|+||||++ |+|.++++.. .+++..+..++.||++||+|||+. ||+||||||+|||++.+
T Consensus 73 ~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~ 145 (388)
T 3oz6_A 73 NLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAE 145 (388)
T ss_dssp CEEEEEECTTSSCEEEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTT
T ss_pred eeeeEEecCCCCEEEEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCC
Confidence 9999998654 6799999996 6899998764 389999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCccccccCC-------------------ccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGD-------------------FARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVL 897 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~ell 897 (1035)
+.+||+|||+|+.+.... ........+||+.|+|||++.+ ..++.++||||+||++|||+
T Consensus 146 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 225 (388)
T 3oz6_A 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225 (388)
T ss_dssp CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHH
Confidence 999999999998654311 0112334689999999999876 67899999999999999999
Q ss_pred hCCCCCCCC
Q 039419 898 TGKQPIDPT 906 (1035)
Q Consensus 898 tg~~P~~~~ 906 (1035)
+|+.||...
T Consensus 226 ~g~~pf~~~ 234 (388)
T 3oz6_A 226 CGKPIFPGS 234 (388)
T ss_dssp HSSCSCCCS
T ss_pred hCCCCCCCC
Confidence 999999754
No 175
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.5e-37 Score=343.10 Aligned_cols=260 Identities=26% Similarity=0.387 Sum_probs=200.3
Q ss_pred hccccCCeeeeeCCcEEEEEEECC----CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN----GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
..|...+.||+|+||+||+|.+.+ ...||+|++...... ...+.+.+|+.++++++||||+++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~ 91 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-------------GEVSQFLTEGIIMKDFSHPNVLSL 91 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSH-------------HHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCH-------------HHHHHHHHHHHHHHhCCCCCEeee
Confidence 468888999999999999997643 236899998653221 125679999999999999999999
Q ss_pred EeEEE-cCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 762 LGCCW-NRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 762 ~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
++++. .++..++||||+++|+|.++++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~ 167 (298)
T 3f66_A 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTV 167 (298)
T ss_dssp CEEECCSSSCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCE
T ss_pred eeEEEcCCCceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCE
Confidence 99865 4567899999999999999997543 3488999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCcc--ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHH
Q 039419 841 YIADFGLAKLVVEGDFA--RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~ 917 (1035)
||+|||.++........ .......||+.|+|||...+..++.++||||+|+++|||++ |..||...... .....+
T Consensus 168 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~ 245 (298)
T 3f66_A 168 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL 245 (298)
T ss_dssp EECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHH
T ss_pred EECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHH
Confidence 99999999876543321 22334567889999999998899999999999999999999 55566543222 122221
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
..... .......+ + .+.+++.+||++||++||+++|+++.|+++...
T Consensus 246 ~~~~~------~~~~~~~~---~---~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 246 LQGRR------LLQPEYCP---D---PLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp HTTCC------CCCCTTCC---H---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hcCCC------CCCCccCC---H---HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11110 00011111 1 244578889999999999999999999988653
No 176
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=355.48 Aligned_cols=248 Identities=19% Similarity=0.233 Sum_probs=192.3
Q ss_pred cCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEEEcC
Q 039419 690 EDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 768 (1035)
Q Consensus 690 ~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 768 (1035)
..+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 158 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK--------------DKEEVKNEISVMNQLDHANLIQLYDAFESK 158 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHH--------------HHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccc--------------cHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3568999999999999775 5899999998653221 246789999999999999999999999999
Q ss_pred CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE--cCCCceEEeecc
Q 039419 769 NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI--GPEFEPYIADFG 846 (1035)
Q Consensus 769 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll--~~~~~~kl~DFG 846 (1035)
+..|+||||+++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 159 ~~~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG 234 (373)
T 2x4f_A 159 NDIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFG 234 (373)
T ss_dssp SEEEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCS
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCC
Confidence 99999999999999999886543 3489999999999999999999999 99999999999999 567889999999
Q ss_pred CccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccchhh
Q 039419 847 LAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAIEV 926 (1035)
Q Consensus 847 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1035)
+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..... .
T Consensus 235 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~i~~~~~--~- 306 (373)
T 2x4f_A 235 LARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--ETLNNILACRW--D- 306 (373)
T ss_dssp SCEECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCC--C-
T ss_pred CceecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccC--C-
Confidence 9987654332 23457999999999998888999999999999999999999999754221 11111111100 0
Q ss_pred hcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 927 LDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.........+ ..+.+++.+||++||++||++.|++++
T Consensus 307 ~~~~~~~~~~------~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 307 LEDEEFQDIS------EEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp SCSGGGTTSC------HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CChhhhccCC------HHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000001111 234567888999999999999999984
No 177
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=359.91 Aligned_cols=257 Identities=20% Similarity=0.197 Sum_probs=199.7
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||+||+|+.+ +++.||||++........ ...+.+.+|+.++..++||||++++++
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~-----------~~~~~~~~E~~il~~~~hp~Iv~l~~~ 129 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR-----------GEVSCFREERDVLVNGDRRWITQLHFA 129 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHH-----------GGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhH-----------HHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence 68999999999999999999876 589999999964322111 123458899999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||++||+|.+++...+ ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|
T Consensus 130 ~~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 130 FQDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred EeeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 999999999999999999999998654 2489999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccc-------cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY-------MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
||+++....... ......+||+.|+|||++. ...++.++|||||||++|||++|+.||...... .....+
T Consensus 206 FGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i 282 (412)
T 2vd5_A 206 FGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ETYGKI 282 (412)
T ss_dssp CTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH
T ss_pred chhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 999987654332 1223568999999999876 356899999999999999999999999754221 111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCC---CCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDR---PTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~R---Ps~~el~~~ 969 (1035)
.... .....+......+ ....+++.+||. +|++| |+++|++++
T Consensus 283 ~~~~--~~~~~p~~~~~~s------~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 283 VHYK--EHLSLPLVDEGVP------EEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HTHH--HHCCCC----CCC------HHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred Hhcc--cCcCCCccccCCC------HHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1000 0000000011111 233557788998 99998 689998775
No 178
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1e-37 Score=343.12 Aligned_cols=262 Identities=23% Similarity=0.355 Sum_probs=203.7
Q ss_pred hccccCC-eeeeeCCcEEEEEEEC---CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDS-VVGKGCSGIVYRAEME---NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~-~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
++|...+ .||+|+||+||+|.+. .++.||||++....... ...+.+.+|+.++++++||||+++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~i~~~ 83 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP------------ALKDELLAEANVMQQLDNPYIVRM 83 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----C------------HHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCH------------HHHHHHHHHHHHHHhCCCCCEEEE
Confidence 5677777 9999999999999542 36889999996543211 235689999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++++ ..+..|+||||+++++|.+++...+. +++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 84 ~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k 157 (291)
T 1xbb_A 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAK 157 (291)
T ss_dssp EEEE-ESSSEEEEEECCTTEEHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred EEEE-CCCCcEEEEEeCCCCCHHHHHHhCcC--CCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEE
Confidence 9998 56778999999999999999987543 89999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccCCcc-ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 842 IADFGLAKLVVEGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
|+|||+++........ .......+++.|+|||+..+..++.++||||||+++|||++ |+.||..... ......+..
T Consensus 158 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~ 235 (291)
T 1xbb_A 158 ISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLEK 235 (291)
T ss_dssp ECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHT
T ss_pred EccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc
Confidence 9999999876543321 12223457789999999988889999999999999999999 9999975432 122222211
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQEREE 979 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~~ 979 (1035)
.. ........+ ..+..++.+||+.||++||++.++++.|+++......
T Consensus 236 ~~------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 236 GE------RMGCPAGCP------REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp TC------CCCCCTTCC------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred CC------CCCCCCCCC------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 10 001111111 1234578889999999999999999999998665443
No 179
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=357.85 Aligned_cols=273 Identities=16% Similarity=0.197 Sum_probs=199.3
Q ss_pred hccccCCeeeeeCCcEEEEEEEC----CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME----NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
++|...+.||+|+||+||+|.+. .+..||||++.........+. ..........+.+|+..++.++||||+++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~---~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSEL---KFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHH---HHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHH---HHHHHHhhhHHHHHHHhhccccccCccee
Confidence 67999999999999999999876 578899999875432111000 00001123467889999999999999999
Q ss_pred EeEEEc----CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 762 LGCCWN----RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 762 ~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
++++.+ ....|+||||+ +++|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 999987 67889999999 999999998765 489999999999999999999999 99999999999999988
Q ss_pred C--ceEEeeccCccccccCCcc-----ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCc
Q 039419 838 F--EPYIADFGLAKLVVEGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEG 910 (1035)
Q Consensus 838 ~--~~kl~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~ 910 (1035)
+ .+||+|||+++.+...... .......||+.|+|||+..+..++.++|||||||++|||++|+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 9999999999876543211 11235679999999999998899999999999999999999999996432222
Q ss_pred hhHHHHHHHhccc-hhhhccccc-CCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 039419 911 LHIVDWVRQKRGA-IEVLDKSLR-ARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEI 973 (1035)
Q Consensus 911 ~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~ 973 (1035)
............. ......... ...+ ..+.+++.+||+.||++||+++++++.|+.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 268 VAVQTAKTNLLDELPQSVLKWAPSGSSC------CEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHSCTTSCC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHHHHhhcccccHHHHhhccccccH------HHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 2111111111000 000000000 0111 1344577789999999999999999998764
No 180
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.5e-38 Score=345.35 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=203.5
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+.+ ++.||+|++........ ...+.+.+|+.++++++||||+++++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~iv~~~~ 82 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP-----------HQREKMSMEISIHRSLAHQHVVGFHG 82 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH-----------HHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCH-----------HHHHHHHHHHHHHHhCCCCCEeeeee
Confidence 4678999999999999999998764 78999999865332211 23567899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||+++++|.+++..... +++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 157 (294)
T 2rku_A 83 FFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 157 (294)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred eeccCCEEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEE
Confidence 99999999999999999999999876543 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||.++...... .......||+.|+|||+..+..++.++||||||+++|||++|+.||...... .....+.. ..
T Consensus 158 dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~--~~ 231 (294)
T 2rku_A 158 DFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRIKK--NE 231 (294)
T ss_dssp CCTTCEECCSTT--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHT--TC
T ss_pred eccCceecccCc--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhh--cc
Confidence 999998764332 1223567999999999998888999999999999999999999999754211 11111110 00
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.......+ .....++.+||+.||++||+++|++++
T Consensus 232 -----~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 -----YSIPKHIN------PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -----CCCCTTSC------HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----CCCccccC------HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 01111111 123457888999999999999999885
No 181
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.2e-37 Score=359.01 Aligned_cols=264 Identities=19% Similarity=0.224 Sum_probs=205.9
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCC-CceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRH-KNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~ 762 (1035)
.++|.+.+.||+|+||.||+|.+. +++.||||++..... .+++.+|+++++.++| ++|+.+.
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------------~~~~~~E~~il~~L~~~~~i~~i~ 69 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------------HPQLLYESKIYRILQGGTGIPNVR 69 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----------------SCCHHHHHHHHHHTTTSTTCCCEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----------------cHHHHHHHHHHHHhcCCCCCCeEE
Confidence 367999999999999999999874 689999998754321 2347899999999986 6677777
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE---cCCCc
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI---GPEFE 839 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll---~~~~~ 839 (1035)
.++.+.+..++||||+ +++|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.
T Consensus 70 ~~~~~~~~~~lvme~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~ 144 (483)
T 3sv0_A 70 WFGVEGDYNVLVMDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQ 144 (483)
T ss_dssp EEEEETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTC
T ss_pred EEEeeCCEEEEEEECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCe
Confidence 7777888899999999 999999997543 3489999999999999999999999 99999999999999 68899
Q ss_pred eEEeeccCccccccCCcc-----ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch-hH
Q 039419 840 PYIADFGLAKLVVEGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL-HI 913 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~-~~ 913 (1035)
+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..
T Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~ 224 (483)
T 3sv0_A 145 VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK 224 (483)
T ss_dssp EEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH
T ss_pred EEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH
Confidence 999999999877654321 122366899999999999999999999999999999999999999986543221 11
Q ss_pred HHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 914 VDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
...+..... ...+ ..+....+ ..+..++..||+.||++||++.+|++.|+++....
T Consensus 225 ~~~i~~~~~-~~~~-~~l~~~~p------~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 225 YEKISEKKV-ATSI-EALCRGYP------TEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHHHHHHHH-HSCH-HHHHTTSC------HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhhccc-cccH-HHHhcCCc------HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 111111100 0000 01111111 13455788899999999999999999999986543
No 182
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.5e-37 Score=338.68 Aligned_cols=258 Identities=21% Similarity=0.296 Sum_probs=202.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +++.||+|++.......... ....+.+.+|+.++++++||||+++++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~~i~~~~~ 75 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRR--------GVSREEIEREVNILREIRHPNIITLHD 75 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSS--------SBCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhcccccccc--------chHHHHHHHHHHHHHhCCCCCeeehhh
Confidence 467999999999999999999876 58999999997654332210 123678999999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC----c
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF----E 839 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~----~ 839 (1035)
++.+.+..++||||+++++|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++ .
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 76 IFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp EEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCC
T ss_pred eecCCCeEEEEEeecCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCc
Confidence 99999999999999999999999976544 89999999999999999999999 999999999999998877 8
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
+||+|||.+....... ......|++.|+|||+..+..++.++||||||+++|+|++|+.||..... ......+..
T Consensus 151 ~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~ 225 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--QETLTNISA 225 (283)
T ss_dssp EEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHT
T ss_pred eEEEecccceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--HHHHHHhHh
Confidence 9999999998764432 12345799999999999888999999999999999999999999975421 111111111
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. ...........+ ..+.+++.+||+.||++||++.|++++
T Consensus 226 ~~---~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 226 VN---YDFDEEYFSNTS------ELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp TC---CCCCHHHHTTCC------HHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred cc---cCCcchhcccCC------HHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 00 000000001111 124567888999999999999999984
No 183
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5e-38 Score=352.86 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=203.9
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+.+ ++.||+|++........ ...+.+.+|+.++++++||||+++++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~iv~~~~ 108 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP-----------HQREKMSMEISIHRSLAHQHVVGFHG 108 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH-----------HHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCH-----------HHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4689999999999999999998764 78999999865332211 23567899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||+++++|.+++..... +++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~ 183 (335)
T 2owb_A 109 FFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 183 (335)
T ss_dssp EEECSSEEEEEECCCTTCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEEC
T ss_pred EEecCCeEEEEEecCCCCCHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEe
Confidence 99999999999999999999999877543 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+...
T Consensus 184 Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~--- 256 (335)
T 2owb_A 184 DFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRIKKN--- 256 (335)
T ss_dssp CCTTCEECCSTT--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHT---
T ss_pred eccCceecccCc--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHhcC---
Confidence 999998764332 1223567999999999998888999999999999999999999999753211 111111110
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
........+ .....++.+||+.||++||+++|++++
T Consensus 257 ----~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 257 ----EYSIPKHIN------PVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ----CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----CCCCCccCC------HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001111111 123457888999999999999999875
No 184
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.7e-38 Score=343.41 Aligned_cols=249 Identities=27% Similarity=0.369 Sum_probs=202.2
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||.||+|.+. +++.||+|++........ ...+.+.+|+.++++++||||++++++
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~~~ 82 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE-----------GVEHQLRREIEIQSHLRHPNILRMYNY 82 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchH-----------HHHHHHHHHHHHHhcCCCCCEeeEEEE
Confidence 67899999999999999999876 478899999864322111 235679999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||+++|+|.+++...+. +++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~D 157 (284)
T 2vgo_A 83 FHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIAD 157 (284)
T ss_dssp EECSSEEEEEECCCTTEEHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred EEcCCEEEEEEEeCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEec
Confidence 9999999999999999999999987654 89999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccch
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
||.+....... .....|++.|+|||+..+..++.++||||||+++|||++|+.||...... .....+..
T Consensus 158 fg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~----- 226 (284)
T 2vgo_A 158 FGWSVHAPSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHRRIVN----- 226 (284)
T ss_dssp CTTCEECSSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHT-----
T ss_pred ccccccCcccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHHHHhc-----
Confidence 99987653321 23567999999999999889999999999999999999999999754211 11111110
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.+.......+ ....+++.+||+.||++||++++++++
T Consensus 227 --~~~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 227 --VDLKFPPFLS------DGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp --TCCCCCTTSC------HHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred --cccCCCCcCC------HHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 0111111111 123457888999999999999999885
No 185
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-37 Score=342.47 Aligned_cols=261 Identities=25% Similarity=0.350 Sum_probs=202.6
Q ss_pred ccccCCeeeeeCCcEEEEEEECC----CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 687 CLVEDSVVGKGCSGIVYRAEMEN----GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 687 ~~~~~~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
.|...+.||+|+||+||+|.+.+ +..||+|++...... ...+.+.+|+.++++++||||++++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~~ 88 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM-------------QQVEAFLREGLLMRGLNHPNVLALI 88 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSH-------------HHHHHHHHHHHHHHTCCCTTBCCCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccH-------------HHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 45667899999999999997542 237999998643221 1256789999999999999999999
Q ss_pred eEEEcCCcc-eEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 763 GCCWNRNTR-LLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 763 ~~~~~~~~~-~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
+++.+.+.. ++||||+.+|+|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+|
T Consensus 89 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~k 164 (298)
T 3pls_A 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVK 164 (298)
T ss_dssp EEECCSSSCCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEE
T ss_pred EEEecCCCCcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 999876655 99999999999999997643 3489999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccCCc--cccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 842 IADFGLAKLVVEGDF--ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
|+|||.++....... ........+|+.|+|||...+..++.++||||||+++|||++|..|+..... .......+..
T Consensus 165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~~ 243 (298)
T 3pls_A 165 VADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLAQ 243 (298)
T ss_dssp ECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHHT
T ss_pred eCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhhc
Confidence 999999986644321 1223355789999999999999999999999999999999996665433221 1222222222
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
.... ......+ ..+.+++.+||+.||++|||+.++++.|+++....
T Consensus 244 ~~~~------~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 244 GRRL------PQPEYCP------DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp TCCC------CCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCCC------CCCccch------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 1100 0011111 12445788899999999999999999999986543
No 186
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=8.6e-38 Score=342.54 Aligned_cols=253 Identities=21% Similarity=0.375 Sum_probs=204.4
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
....+|...+.||+|+||.||+|.+. +++.||+|++.... +.+.+|++++++++||||+++
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------------------~~~~~e~~~l~~l~h~~i~~~ 69 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------------------EKAEREVKALAKLDHVNIVHY 69 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------------------GGGHHHHHHHHHCCCTTBCCE
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------------------HHHHHHHHHHHhCCCCCEEEE
Confidence 44578999999999999999999886 68999999985421 246789999999999999999
Q ss_pred EeEEEc----------------CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeecc
Q 039419 762 LGCCWN----------------RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHR 825 (1035)
Q Consensus 762 ~~~~~~----------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHr 825 (1035)
++++.. ....|+||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~ 146 (284)
T 2a19_B 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINR 146 (284)
T ss_dssp EEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred eeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceeec
Confidence 998864 34579999999999999999876555699999999999999999999999 99999
Q ss_pred CCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 039419 826 DIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDP 905 (1035)
Q Consensus 826 Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~ 905 (1035)
||||+||+++.++.+||+|||.++...... ......||+.|+|||+..+..++.++||||||+++|||++|..|+..
T Consensus 147 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 223 (284)
T 2a19_B 147 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 223 (284)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH
T ss_pred cCCHHHEEEcCCCCEEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh
Confidence 999999999999999999999998765432 22345799999999999888999999999999999999999988742
Q ss_pred CCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 906 TIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
. ..+... ..........+. ....++.+||+.||++||++.|++++|+.+....+
T Consensus 224 ~-------~~~~~~------~~~~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 224 T-------SKFFTD------LRDGIISDIFDK------KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp H-------HHHHHH------HHTTCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred H-------HHHHHH------hhcccccccCCH------HHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 1 111111 011111111221 23457788999999999999999999988864433
No 187
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.4e-38 Score=377.01 Aligned_cols=255 Identities=27% Similarity=0.455 Sum_probs=205.9
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
++|...+.||+|+||.||+|.+.++..||||++..... ..+.|.+|+++|++++||||+++++++
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------------~~~~~~~E~~~l~~l~hpniv~~~~~~ 331 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------------SPEAFLQEAQVMKKLRHEKLVQLYAVV 331 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---------------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---------------CHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 56888899999999999999999888999999965321 246799999999999999999999998
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeec
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADF 845 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DF 845 (1035)
.+ +..|+||||+++|+|.++++......+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 332 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DF 407 (535)
T 2h8h_A 332 SE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 407 (535)
T ss_dssp CS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCT
T ss_pred ee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccc
Confidence 76 6789999999999999999865444589999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccch
Q 039419 846 GLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 846 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
|+++....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+...
T Consensus 408 G~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~i~~~---- 480 (535)
T 2h8h_A 408 GLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG---- 480 (535)
T ss_dssp TSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHHHHTT----
T ss_pred ccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcC----
Confidence 99987643221 12234567889999999988899999999999999999999 9999975422 1122222111
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
.+...+..+. ..+.+++.+||+.||++||++++|++.|+++.
T Consensus 481 ------~~~~~~~~~~--~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 481 ------YRMPCPPECP--ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp ------CCCCCCTTCC--HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ------CCCCCCCCCC--HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1111111111 12345788899999999999999999987763
No 188
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.5e-37 Score=339.95 Aligned_cols=266 Identities=18% Similarity=0.234 Sum_probs=202.3
Q ss_pred HHhccccCCeeeeeCCcEEEEEEE-CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEM-ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
+.++|...+.||+|+||+||+|++ .+++.||||++..... .+.+.+|+.++++++|++++..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------------~~~~~~e~~~l~~l~~~~~i~~~ 70 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------------HPQLHIESKIYKMMQGGVGIPTI 70 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------------------CCCHHHHHHHHHHHTTSTTCCCE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----------------chHHHHHHHHHHHhcCCCCCCee
Confidence 347899999999999999999986 4689999998654321 23478899999999988776666
Q ss_pred eEE-EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE---cCCC
Q 039419 763 GCC-WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI---GPEF 838 (1035)
Q Consensus 763 ~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll---~~~~ 838 (1035)
+.+ .+.+..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++ +.++
T Consensus 71 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~ 145 (296)
T 4hgt_A 71 RWCGAEGDYNVMVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGN 145 (296)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTT
T ss_pred eeecCCCCceEEEEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCC
Confidence 655 5667789999999 999999997543 2489999999999999999999999 99999999999999 7899
Q ss_pred ceEEeeccCccccccCCcc-----ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCc-hh
Q 039419 839 EPYIADFGLAKLVVEGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEG-LH 912 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~-~~ 912 (1035)
.+||+|||+++........ .......||+.|+|||+..+..++.++|||||||++|||++|+.||....... ..
T Consensus 146 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 4hgt_A 146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence 9999999999876554321 12335679999999999999999999999999999999999999998643321 11
Q ss_pred HHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 913 IVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
....+.... ............+ ..+..++.+||+.||++||+++++++.|+++.....
T Consensus 226 ~~~~~~~~~--~~~~~~~~~~~~~------~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 226 KYERISEKK--MSTPIEVLCKGYP------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHHHHHHH--HHSCHHHHTTTSC------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred hhhhhhccc--ccchhhhhhccCC------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 111111100 0000000111111 134457788999999999999999999999876554
No 189
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.2e-39 Score=357.58 Aligned_cols=260 Identities=27% Similarity=0.361 Sum_probs=186.3
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhc--CCCCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGS--IRHKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~ 763 (1035)
++|...+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----------------~~~~~~~e~~~~~~~~~~h~~i~~~~~ 64 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----------------EERSWFREAEIYQTVMLRHENILGFIA 64 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----------------THHHHHHHHHHHTSTTCCC-CBCCEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----------------chhhHHHHHHHHHHHhccCcceeeeee
Confidence 57899999999999999999876 889999998542 13567788899888 78999999999
Q ss_pred EEEcCC----cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhh--------ccCCCCeeccCCCccc
Q 039419 764 CCWNRN----TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLH--------HDCVPPIVHRDIKANN 831 (1035)
Q Consensus 764 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivHrDikp~N 831 (1035)
++.+.. ..++||||+++|+|.++++... +++..+..++.|++.||+||| +. +|+||||||+|
T Consensus 65 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~N 138 (303)
T 3gxj_A 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKN 138 (303)
T ss_dssp EEEEECSSSEEEEEEEECCTTCCHHHHHHHCC---BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGG
T ss_pred ecccCCCccceeEEEEeccCCCCHHHHHhccC---cchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHH
Confidence 998776 6799999999999999997643 778888999999999999999 77 99999999999
Q ss_pred EEEcCCCceEEeeccCccccccCCcc--ccccccCCcccccCCcccccC------CCCccccchhHHHHHHHHHhC----
Q 039419 832 ILIGPEFEPYIADFGLAKLVVEGDFA--RSSNTVAGSYGYIAPEYGYMM------KITEKSDVYSYGVVVLEVLTG---- 899 (1035)
Q Consensus 832 Ill~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGvvl~elltg---- 899 (1035)
|+++.++.+||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 139 il~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (303)
T 3gxj_A 139 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 218 (303)
T ss_dssp C-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBT
T ss_pred eEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999866543321 112345799999999997765 344689999999999999999
Q ss_pred ------CCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcc---cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039419 900 ------KQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEV---EIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMI 970 (1035)
Q Consensus 900 ------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L 970 (1035)
+.||....+.......... .......+...+. .......+.+++.+||+.||++|||++++++.|
T Consensus 219 ~~~~~~~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 292 (303)
T 3gxj_A 219 GIHEDYQLPYYDLVPSDPSVEEMRK------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292 (303)
T ss_dssp TBC-CCCCTTTTTCC-CCCCC-CHH------HHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred cccceeeccccccCCCCccHHHHHH------HHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 6666543221111000000 0111111111111 113334556789999999999999999999999
Q ss_pred HHHHH
Q 039419 971 KEIKQ 975 (1035)
Q Consensus 971 ~~~~~ 975 (1035)
+.+.+
T Consensus 293 ~~l~~ 297 (303)
T 3gxj_A 293 SQLSQ 297 (303)
T ss_dssp HC-CC
T ss_pred HHhhh
Confidence 88754
No 190
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.7e-38 Score=342.78 Aligned_cols=253 Identities=26% Similarity=0.382 Sum_probs=198.1
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
.++|...+.||+|+||+||+|++. |+.||||++.... ..+.+.+|+.++++++||||++++++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----------------~~~~~~~E~~~l~~l~h~~iv~~~~~ 82 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----------------TAQAFLAEASVMTQLRHSNLVQLLGV 82 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------------------HHHHHTHHHHTTCCCTTBCCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----------------HHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 468999999999999999999886 8899999986421 24678999999999999999999999
Q ss_pred EEcC-CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 765 CWNR-NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 765 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
+.+. +..|+||||+++|+|.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~ 159 (278)
T 1byg_A 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVS 159 (278)
T ss_dssp ECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEEC
T ss_pred EEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEe
Confidence 7654 4789999999999999999876544478999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhcc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|||.++...... ....+++.|+|||+..+..++.++||||||+++|||++ |+.||...... .....+...
T Consensus 160 Dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~-- 230 (278)
T 1byg_A 160 DFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKG-- 230 (278)
T ss_dssp CCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTT--
T ss_pred eccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcC--
Confidence 999987553321 23467889999999988899999999999999999998 99999754322 121111110
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
.........+ ..+..++.+||+.||++||++.|+++.|+++...
T Consensus 231 ----~~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 231 ----YKMDAPDGCP------PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp ----CCCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCcccCC------HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 0001111111 1234577889999999999999999999998643
No 191
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.3e-38 Score=362.39 Aligned_cols=263 Identities=19% Similarity=0.242 Sum_probs=193.5
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
..+.++|...+.||+|+||+||+|.+. +++.||||++........... .......+.+|+.++++++||||++
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~------~~~~~~~~~~E~~~l~~l~hpniv~ 204 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAR------EADPALNVETEIEILKKLNHPCIIK 204 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------------CCHHHHHHHHHHCCCTTBCC
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccc------cchhHHHHHHHHHHHHhCCCCCEee
Confidence 556789999999999999999999765 589999999975432211100 0012335889999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC--
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF-- 838 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~-- 838 (1035)
+++++.. +..|+||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+|||++.++
T Consensus 205 l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~ 278 (419)
T 3i6u_A 205 IKNFFDA-EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEED 278 (419)
T ss_dssp CCEEEES-SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSS
T ss_pred EEEEEec-CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCc
Confidence 9999754 45799999999999999987654 389999999999999999999999 999999999999997544
Q ss_pred -ceEEeeccCccccccCCccccccccCCcccccCCcccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHH
Q 039419 839 -EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIV 914 (1035)
Q Consensus 839 -~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~ 914 (1035)
.+||+|||+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||....... ...
T Consensus 279 ~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~ 354 (419)
T 3i6u_A 279 CLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLK 354 (419)
T ss_dssp CCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHH
T ss_pred ceEEEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHH
Confidence 59999999998764432 233567999999999975 3567889999999999999999999997543221 222
Q ss_pred HHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 915 DWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..+...... ..+...... ...+.+++.+||+.||++||+++|++++
T Consensus 355 ~~i~~~~~~---~~~~~~~~~------~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 355 DQITSGKYN---FIPEVWAEV------SEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHHTTCCC---CCHHHHTTS------CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhcCCCC---CCchhhccc------CHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 222111100 000000111 1234567888999999999999999985
No 192
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=345.92 Aligned_cols=268 Identities=21% Similarity=0.244 Sum_probs=200.4
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC---CCceee
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR---HKNIVR 760 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~ 760 (1035)
.++|...+.||+|+||+||+|++. +++.||||++......... ......+.+|+.++++++ ||||++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~~~~h~niv~ 78 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGG---------GGLPISTVREVALLRRLEAFEHPNVVR 78 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTS---------SCCCHHHHHHHHHHHHHHHHCCTTBCC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccc---------cccchhHHHHHHHHHHHhhcCCCCeEE
Confidence 478999999999999999999874 5899999998643221110 122356778888887775 999999
Q ss_pred EEeEEEcCC-----cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc
Q 039419 761 FLGCCWNRN-----TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG 835 (1035)
Q Consensus 761 l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~ 835 (1035)
+++++.... ..++||||+. |+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 79 LMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVT 154 (308)
T ss_dssp EEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEEC
T ss_pred eeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEc
Confidence 999998765 4789999996 6999999887666699999999999999999999999 999999999999999
Q ss_pred CCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHH
Q 039419 836 PEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVD 915 (1035)
Q Consensus 836 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~ 915 (1035)
.++.+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~ 230 (308)
T 3g33_A 155 SGGTVKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGK 230 (308)
T ss_dssp TTSCEEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHH
T ss_pred CCCCEEEeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH
Confidence 99999999999998664332 234567999999999998899999999999999999999999999754321 11111
Q ss_pred HHHHhccc-hhhhc-------ccccCCCcccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 916 WVRQKRGA-IEVLD-------KSLRARPEVEIE-----EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 916 ~~~~~~~~-~~~~~-------~~~~~~~~~~~~-----~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
........ ..... .......+.... ......+++.+||++||++|||+.|++++
T Consensus 231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 231 IFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 11111000 00000 000000000000 01234567888999999999999999874
No 193
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=344.97 Aligned_cols=257 Identities=19% Similarity=0.259 Sum_probs=198.8
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
+.++|.+.+.||+|+||.||+|.+. +++.||+|++........ ....+.+.+|+.++++++||||++++
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~~E~~~l~~l~h~~i~~~~ 72 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRI----------PNGEANVKKEIQLLRRLRHKNVIQLV 72 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHS----------TTHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccccc----------chhHHHHHHHHHHHHhcCCCCeeEEE
Confidence 4578999999999999999999875 588999999965322111 02356899999999999999999999
Q ss_pred eEEEc--CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 763 GCCWN--RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 763 ~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++.. .+..|+||||++++ +.+++.......+++..+..++.||++||+|||+. +|+||||||+||+++.++.+
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~ 148 (305)
T 2wtk_C 73 DVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTL 148 (305)
T ss_dssp EEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcE
Confidence 99853 45789999999876 87887766566699999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCC--CCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMK--ITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
||+|||.+................||+.|+|||+..+.. ++.++||||||+++|||++|+.||..... ......+.
T Consensus 149 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~ 226 (305)
T 2wtk_C 149 KISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YKLFENIG 226 (305)
T ss_dssp EECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHH
T ss_pred EeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHHh
Confidence 999999998765433333334567999999999977544 47799999999999999999999975321 11111111
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. ........+ ..+.+++.+||+.||++||+++|++++
T Consensus 227 ~~-------~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 227 KG-------SYAIPGDCG------PPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HC-------CCCCCSSSC------HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred cC-------CCCCCCccC------HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 10 001111111 123457788999999999999999885
No 194
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=9.8e-38 Score=351.37 Aligned_cols=250 Identities=28% Similarity=0.380 Sum_probs=197.5
Q ss_pred HhccccCCeeeeeCCcEEEEEEE-CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM-ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.+.|...+.||+|+||+||+|+. .+++.||||++........ ...+.+.+|+.++++++||||+++++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hpniv~~~~ 121 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN-----------EKWQDIIKEVRFLQKLRHPNTIQYRG 121 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHH-----------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccch-----------HHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 35688899999999999999976 4689999999865432221 12467899999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+++..|+||||+. |++.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 122 ~~~~~~~~~lv~e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~ 196 (348)
T 1u5q_A 122 CYLREHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLG 196 (348)
T ss_dssp EEEETTEEEEEEECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEEC
T ss_pred EEEECCeEEEEEecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEe
Confidence 9999999999999996 68888886543 3489999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHh
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQK 920 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~ 920 (1035)
|||+++..... ....||+.|+|||++. ...++.++|||||||++|||++|+.||...... .....+...
T Consensus 197 DfG~a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--~~~~~~~~~ 268 (348)
T 1u5q_A 197 DFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQN 268 (348)
T ss_dssp CCTTCBSSSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHS
T ss_pred eccCceecCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhc
Confidence 99999765332 3467999999999874 567899999999999999999999999653211 111111110
Q ss_pred ccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 921 RGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. .........+. .+..++.+||+.||++|||+++++++
T Consensus 269 ~-----~~~~~~~~~~~------~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 269 E-----SPALQSGHWSE------YFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp C-----CCCCCCTTSCH------HHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred C-----CCCCCCCCCCH------HHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 00000111111 23457788999999999999999875
No 195
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-38 Score=355.94 Aligned_cols=259 Identities=21% Similarity=0.257 Sum_probs=200.5
Q ss_pred HhccccCCeeeeeCCcEEEEEEE----CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCcee
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM----ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIV 759 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv 759 (1035)
.++|...+.||+|+||+||+|+. .+++.||||++......... ...+.+.+|+++++++ +||||+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~~h~~iv 122 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA----------KTTEHTRTERQVLEHIRQSPFLV 122 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEE----------SSGGGCCCHHHHHHHHHTCTTBC
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhh----------hHHHHHHHHHHHHHHccCCCcee
Confidence 36799999999999999999987 36899999999654321111 1234567899999999 699999
Q ss_pred eEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc
Q 039419 760 RFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE 839 (1035)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~ 839 (1035)
++++++.+.+..|+||||+++|+|.+++..... +++..+..++.||++||+|||+. +|+||||||+||+++.++.
T Consensus 123 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 197 (355)
T 1vzo_A 123 TLHYAFQTETKLHLILDYINGGELFTHLSQRER--FTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGH 197 (355)
T ss_dssp CEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSC
T ss_pred EEEEEEeeCceEEEEeecCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCc
Confidence 999999999999999999999999999987654 89999999999999999999999 9999999999999999999
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM--MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+||+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....
T Consensus 198 ~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~ 275 (355)
T 1vzo_A 198 VVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEIS 275 (355)
T ss_dssp EEESCSSEEEECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHH
T ss_pred EEEeeCCCCeecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHH
Confidence 99999999986644322 22335679999999999875 3478899999999999999999999975432211 11111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRP-----TMKDVAAMI 970 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RP-----s~~el~~~L 970 (1035)
+.... .........+ ....+++.+||+.||++|| +++|++++.
T Consensus 276 ~~~~~----~~~~~~~~~~------~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 276 RRILK----SEPPYPQEMS------ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHHHH----CCCCCCTTSC------HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHHhc----cCCCCCcccC------HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 11000 0011111111 1234578889999999999 999998864
No 196
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1e-37 Score=340.40 Aligned_cols=250 Identities=24% Similarity=0.359 Sum_probs=193.9
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|.+.+.||+|+||.||+|.+. +++.||||++........ ...+.+.+|+.+++.++||||++++++
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~~~ 79 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSL-----------DVVGKIKREIQNLKLFRHPHIIKLYQV 79 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-----------TCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccch-----------hHHHHHHHHHHHHhcCCCCCEeEEEEE
Confidence 57889999999999999999876 689999999864322111 235688999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||+++++|.+++..... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d 154 (276)
T 2h6d_A 80 ISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIAD 154 (276)
T ss_dssp EECSSEEEEEEECCCSCBHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECC
T ss_pred EecCCeEEEEEeccCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEee
Confidence 9999999999999999999999987654 89999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||.+........ .....||+.|+|||+..+..+ +.++||||||+++|+|++|+.||..... ......+....
T Consensus 155 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~-- 227 (276)
T 2h6d_A 155 FGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKIRGGV-- 227 (276)
T ss_dssp CCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--
T ss_pred cccccccCCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHhhcCc--
Confidence 999987644321 234578999999999887665 5899999999999999999999975321 11111111110
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.......+ ..+..++.+||+.||++||++.|++++
T Consensus 228 -----~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 -----FYIPEYLN------RSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----CCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----ccCchhcC------HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00111111 123457888999999999999999985
No 197
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.5e-37 Score=348.80 Aligned_cols=263 Identities=21% Similarity=0.336 Sum_probs=204.4
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCcee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIV 759 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv 759 (1035)
....++|...+.||+|+||.||+|.+. +|+.||||++.......... ......+.+.+|+++++++ +||||+
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~------~~~~~~~~~~~E~~~l~~l~~hp~iv 163 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE------QLEEVREATRRETHILRQVAGHPHII 163 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHH------HHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHH------HHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence 344578999999999999999999886 69999999986543211000 0012356788999999999 799999
Q ss_pred eEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc
Q 039419 760 RFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE 839 (1035)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~ 839 (1035)
++++++...+..|+||||++|++|.+++..... +++..+..++.||+.||+|||+. ||+||||||+||+++.++.
T Consensus 164 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 164 TLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp CEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 999999999999999999999999999986544 89999999999999999999999 9999999999999999999
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCccccc------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHI 913 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~ 913 (1035)
+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...
T Consensus 239 ikl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~ 313 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILM 313 (365)
T ss_dssp EEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHH
T ss_pred EEEEecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHH
Confidence 9999999998765432 2235689999999998753 3588899999999999999999999965321 111
Q ss_pred HHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 914 VDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...+...... ...+. .... ...+.+++.+||+.||++||++.|++++
T Consensus 314 ~~~i~~~~~~--~~~~~-~~~~------~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 314 LRMIMEGQYQ--FSSPE-WDDR------SSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHHTCCC--CCHHH-HSSS------CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHhCCCC--CCCcc-cccC------CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111111000 00000 0011 1224557888999999999999999874
No 198
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.1e-37 Score=347.53 Aligned_cols=255 Identities=21% Similarity=0.258 Sum_probs=193.0
Q ss_pred hcccc-CCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEE
Q 039419 686 KCLVE-DSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFL 762 (1035)
Q Consensus 686 ~~~~~-~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~ 762 (1035)
+.|.+ .+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|++++.++ +||||++++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~~~~h~~i~~~~ 77 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--------------HIRSRVFREVEMLYQCQGHRNVLELI 77 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--------------CCHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--------------hhHHHHHHHHHHHHHhcCCCCeeeEE
Confidence 45666 478999999999999765 689999999864321 2356789999999985 799999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc---
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE--- 839 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~--- 839 (1035)
+++.+++..|+||||+++|+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 78 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~ 152 (316)
T 2ac3_A 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSP 152 (316)
T ss_dssp EEEEETTEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCS
T ss_pred EEEeeCCEEEEEEEcCCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCc
Confidence 999999999999999999999999987654 89999999999999999999999 9999999999999998776
Q ss_pred eEEeeccCccccccCCc-----cccccccCCcccccCCccccc-----CCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 039419 840 PYIADFGLAKLVVEGDF-----ARSSNTVAGSYGYIAPEYGYM-----MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPE 909 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~ 909 (1035)
+||+|||+++....... ........||+.|+|||+..+ ..++.++|||||||++|||++|+.||......
T Consensus 153 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 232 (316)
T 2ac3_A 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232 (316)
T ss_dssp EEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCS
T ss_pred eEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccc
Confidence 99999999876543211 111224569999999998764 55889999999999999999999999765432
Q ss_pred ch-------------hHHHHHHHhccchhhhcccccCCCccc-HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 910 GL-------------HIVDWVRQKRGAIEVLDKSLRARPEVE-IEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 910 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. .....+... . ...+... ......+.+++.+||+.||++||+++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~~---------~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 233 DCGWDRGEACPACQNMLFESIQEG---------K-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CSCC----CCHHHHHHHHHHHHHC---------C-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccccccccchhHHHHHHHHHhcc---------C-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 10 001111100 0 0000000 0011234568888999999999999999884
No 199
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.1e-37 Score=337.97 Aligned_cols=265 Identities=17% Similarity=0.223 Sum_probs=204.7
Q ss_pred HhccccCCeeeeeCCcEEEEEEE-CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEM-ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|++ .+++.||||++..... .+.+.+|+.++++++|++++..+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------------~~~~~~e~~~l~~l~~~~~i~~~~ 71 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------------HPQLHIESKIYKMMQGGVGIPTIR 71 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----------------CCHHHHHHHHHHHHTTSTTCCCEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----------------hhHHHHHHHHHHHhhcCCCCCccc
Confidence 36789999999999999999987 5689999999854321 236889999999999887666555
Q ss_pred EE-EcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE---cCCCc
Q 039419 764 CC-WNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI---GPEFE 839 (1035)
Q Consensus 764 ~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll---~~~~~ 839 (1035)
++ .+.+..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.
T Consensus 72 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~ 146 (296)
T 3uzp_A 72 WCGAEGDYNVMVMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNL 146 (296)
T ss_dssp EEEEETTEEEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTC
T ss_pred cccCCCCceEEEEEec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCe
Confidence 55 5667789999999 999999997543 3489999999999999999999999 99999999999999 48899
Q ss_pred eEEeeccCccccccCCcc-----ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC-chhH
Q 039419 840 PYIADFGLAKLVVEGDFA-----RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPE-GLHI 913 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~-~~~~ 913 (1035)
+||+|||.++........ .......||+.|+|||+..+..++.++|||||||++|||++|+.||...... ....
T Consensus 147 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 226 (296)
T 3uzp_A 147 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226 (296)
T ss_dssp EEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH
T ss_pred EEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh
Confidence 999999999876554321 1224567999999999999989999999999999999999999999864322 1122
Q ss_pred HHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 914 VDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
...+..... ...........+ ..+..++.+||+.||++||+++++++.|+++.....
T Consensus 227 ~~~~~~~~~--~~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 227 YERISEKKM--STPIEVLCKGYP------SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHHHHHHH--HSCHHHHTTTSC------HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred hhhhccccc--CCchHHHHhhCC------HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 221111100 000001111112 123457788999999999999999999999876554
No 200
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=9.9e-38 Score=343.03 Aligned_cols=250 Identities=18% Similarity=0.350 Sum_probs=197.5
Q ss_pred hccccCCeeeeeCCcEEEEEEECC-C-------cEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCc
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN-G-------EVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKN 757 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 757 (1035)
++|...+.||+|+||+||+|.+.. + ..||+|++..... ...+.+.+|+.++++++|||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~ 73 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR--------------NYSESFFEAASMMSKLSHKH 73 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG--------------GGHHHHHHHHHHHHTSCCTT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH--------------HHHHHHHHHHHHHHhCCCCC
Confidence 578889999999999999996653 3 5799999854221 23568999999999999999
Q ss_pred eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 758 IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
|+++++++.+++..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 74 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIRE 149 (289)
T ss_dssp BCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEEC
T ss_pred EeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecC
Confidence 9999999999999999999999999999997654 3389999999999999999999999 99999999999999988
Q ss_pred Cc--------eEEeeccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCC
Q 039419 838 FE--------PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIP 908 (1035)
Q Consensus 838 ~~--------~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~ 908 (1035)
+. +||+|||.+...... ....||+.|+|||+..+ ..++.++||||||+++|||++|..|+.....
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CcccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 87 999999998754322 23457889999999877 6789999999999999999996555433221
Q ss_pred CchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHH
Q 039419 909 EGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIK 974 (1035)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~ 974 (1035)
.. ........ ........+.. +.+++.+||+.||++|||+.+++++|+++.
T Consensus 224 ~~-~~~~~~~~--------~~~~~~~~~~~------l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 224 SQ-RKLQFYED--------RHQLPAPKAAE------LANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp HH-HHHHHHHT--------TCCCCCCSSCT------THHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred hH-HHHHHhhc--------cCCCCCCCCHH------HHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11 11111110 01111111222 345677899999999999999999998764
No 201
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.7e-38 Score=350.78 Aligned_cols=275 Identities=27% Similarity=0.508 Sum_probs=169.2
Q ss_pred CCCcccCCCCCCCCCCcc--ceeEEeCCC---CcEEEEEecCCcccc--cCCcCCCCCcccceEeecC-cccCCCCCCCC
Q 039419 3 SIPSALSNWNPSDSNPCK--WSHITCSPQ---NFVTEINIQSIELEL--PFPSNLSSLSFLQKLIISG-SNLTGPISPDL 74 (1035)
Q Consensus 3 ~~~~~l~~w~~~~~~~c~--w~gi~c~~~---~~v~~l~~~~~~~~~--~~~~~~~~l~~L~~L~L~~-~~l~~~~~~~~ 74 (1035)
.+|..+++|..+ .+||. |.||+|+.. +.|+.|+++++++.+ .+|..+..+++|++|+|++ |.+++.+|..+
T Consensus 19 ~~~~~l~~W~~~-~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l 97 (313)
T 1ogq_A 19 GNPTTLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAI 97 (313)
T ss_dssp TCCGGGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGG
T ss_pred CCcccccCCCCC-CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhH
Confidence 467789999875 47998 999999864 567777777777766 6666666666666666664 66666666666
Q ss_pred CCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhcccc-ccc
Q 039419 75 GDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLV-NLE 153 (1035)
Q Consensus 75 ~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~-~L~ 153 (1035)
+.+++|++|+|++|++++.+|..++.+++|++|+|++|++++.+|..+..+++|++|+|++|.+++.+|..++.++ +|+
T Consensus 98 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~ 177 (313)
T 1ogq_A 98 AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFT 177 (313)
T ss_dssp GGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCC
T ss_pred hcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCc
Confidence 6666666666666666656666666666666666666666655666666666666666666655544444444443 333
Q ss_pred eeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCC
Q 039419 154 VIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYEN 233 (1035)
Q Consensus 154 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n 233 (1035)
+|++++| .+.+..|..++.++ |++|++++|.+++..|..+..+++|+.|+|++|
T Consensus 178 ~L~L~~N-------------------------~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 231 (313)
T 1ogq_A 178 SMTISRN-------------------------RLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231 (313)
T ss_dssp EEECCSS-------------------------EEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSS
T ss_pred EEECcCC-------------------------eeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCC
Confidence 3333333 33344444444444 555555555554444444444444444444444
Q ss_pred cCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCC
Q 039419 234 DLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPP 313 (1035)
Q Consensus 234 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 313 (1035)
. +++.+|. +..+++|++|+|++|+|++..|..|..+++|++|+|++|++++.+|.
T Consensus 232 ~------------------------l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 232 S------------------------LAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp E------------------------ECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred c------------------------eeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 4 4433333 45566666677777766666666666667777777777777666665
Q ss_pred cccCCCccceeccccch
Q 039419 314 VLSNATSLLQLQLDTNQ 330 (1035)
Q Consensus 314 ~~~~l~~L~~L~L~~N~ 330 (1035)
. ..+++|+.|++++|+
T Consensus 287 ~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 287 G-GNLQRFDVSAYANNK 302 (313)
T ss_dssp S-TTGGGSCGGGTCSSS
T ss_pred C-ccccccChHHhcCCC
Confidence 4 666677777777665
No 202
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=373.94 Aligned_cols=253 Identities=23% Similarity=0.327 Sum_probs=197.0
Q ss_pred eeeeeCCcEEEEEEEC---CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEEEcCC
Q 039419 693 VVGKGCSGIVYRAEME---NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNRN 769 (1035)
Q Consensus 693 ~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 769 (1035)
.||+|+||.||+|.+. ++..||||+++..... ...+.|.+|+.++++++|||||++++++.+ +
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~-------------~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~ 408 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK-------------ADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E 408 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS-------------TTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh-------------HHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence 7999999999999764 4677999999654211 135789999999999999999999999976 5
Q ss_pred cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeeccCcc
Q 039419 770 TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAK 849 (1035)
Q Consensus 770 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~ 849 (1035)
..|+||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 409 ~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~ 484 (613)
T 2ozo_A 409 ALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSK 484 (613)
T ss_dssp SEEEEEECCTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTT
T ss_pred CeEEEEEeCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcc
Confidence 6899999999999999997543 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCc-cccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccchhhh
Q 039419 850 LVVEGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGAIEVL 927 (1035)
Q Consensus 850 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (1035)
....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+....
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i~~~~------ 556 (613)
T 2ozo_A 485 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQGK------ 556 (613)
T ss_dssp TCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHHHHHHTTC------
T ss_pred cccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCC------
Confidence 7644322 112223446789999999998899999999999999999998 9999976432 22233322211
Q ss_pred cccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 928 DKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
+...+..+ ...+..++.+||+.||++||++.++++.|+++....
T Consensus 557 ----~~~~p~~~--~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 557 ----RMECPPEC--PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp ----CCCCCTTC--CHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCcC--CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 11111111 123345788899999999999999999999876543
No 203
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.1e-37 Score=346.85 Aligned_cols=260 Identities=25% Similarity=0.418 Sum_probs=202.2
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcE--EEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEV--IAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l 761 (1035)
++|...+.||+|+||.||+|++. ++.. +|+|.+....... ..+.+.+|+.+++++ +||||+++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~-------------~~~~~~~E~~~l~~l~~hp~iv~~ 91 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-------------DHRDFAGELEVLCKLGHHPNIINL 91 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------------CHHHHHHHHHTTCCCCTTBCCE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchH-------------HHHHHHHHHHHHHhccCCCchhhh
Confidence 67889999999999999999765 4554 4999886432211 245789999999999 89999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCC
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERR--------------DSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDI 827 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDi 827 (1035)
++++.+.+..|+||||+++|+|.+++...+ ...+++..++.++.||++||+|||+. ||+||||
T Consensus 92 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dl 168 (327)
T 1fvr_A 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDL 168 (327)
T ss_dssp EEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred ceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence 999999999999999999999999997653 23589999999999999999999999 9999999
Q ss_pred CcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCC
Q 039419 828 KANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPT 906 (1035)
Q Consensus 828 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~ 906 (1035)
||+||+++.++.+||+|||+++..... .......+++.|+|||+..+..++.++||||||+++|||++ |+.||...
T Consensus 169 kp~NIl~~~~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 245 (327)
T 1fvr_A 169 AARNILVGENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245 (327)
T ss_dssp SGGGEEECGGGCEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccceEEEcCCCeEEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999998743221 12234467889999999988889999999999999999998 99999754
Q ss_pred CCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhHH
Q 039419 907 IPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQERE 978 (1035)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 978 (1035)
.. ........ .......+.... ..+.+++.+||+.||++||+++|+++.|+.+.....
T Consensus 246 ~~-----~~~~~~~~-------~~~~~~~~~~~~--~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 246 TC-----AELYEKLP-------QGYRLEKPLNCD--DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CH-----HHHHHHGG-------GTCCCCCCTTBC--HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred cH-----HHHHHHhh-------cCCCCCCCCCCC--HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 21 11111111 000001111111 224457888999999999999999999999876544
No 204
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.8e-38 Score=352.36 Aligned_cols=273 Identities=23% Similarity=0.333 Sum_probs=196.4
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHH--hcCCCCceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTL--GSIRHKNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l--~~l~hpniv~l~ 762 (1035)
.++|...+.||+|+||.||+|++ +++.||||++.... .+.+..|.+++ ..++||||++++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----------------~~~~~~e~~~~~~~~~~h~~i~~~~ 73 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----------------RQNFINEKNIYRVPLMEHDNIARFI 73 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----------------HHHHHHHHHHHTSTTCCCTTBCCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----------------hhhHHHHHHHHHHHhccCcchhhhe
Confidence 36788999999999999999977 48999999985321 23445555554 458999999999
Q ss_pred eEEEc-----CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccC------CCCeeccCCCccc
Q 039419 763 GCCWN-----RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDC------VPPIVHRDIKANN 831 (1035)
Q Consensus 763 ~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivHrDikp~N 831 (1035)
+.+.. ....|+||||+++|+|.+++.... .++..+..++.||++||+|||+.. .++|+||||||+|
T Consensus 74 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~N 150 (336)
T 3g2f_A 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRN 150 (336)
T ss_dssp EEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGG
T ss_pred ecccccccCCCceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccce
Confidence 86643 225689999999999999997654 588999999999999999999862 2289999999999
Q ss_pred EEEcCCCceEEeeccCccccccCCc------cccccccCCcccccCCccccc-------CCCCccccchhHHHHHHHHHh
Q 039419 832 ILIGPEFEPYIADFGLAKLVVEGDF------ARSSNTVAGSYGYIAPEYGYM-------MKITEKSDVYSYGVVVLEVLT 898 (1035)
Q Consensus 832 Ill~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlGvvl~ellt 898 (1035)
||++.++.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 151 ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~ 230 (336)
T 3g2f_A 151 VLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230 (336)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHh
Confidence 9999999999999999987654321 112234579999999999876 456678999999999999999
Q ss_pred CCCCCCCCCCCchhHHHHHHH--hccc---------hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 039419 899 GKQPIDPTIPEGLHIVDWVRQ--KRGA---------IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVA 967 (1035)
Q Consensus 899 g~~P~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~ 967 (1035)
|..||............+... .... .....+.+.............+.+++.+||+.||++|||++|++
T Consensus 231 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l 310 (336)
T 3g2f_A 231 RCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAE 310 (336)
T ss_dssp TBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred cCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHH
Confidence 988765332111000000000 0000 00001111111111112333456788999999999999999999
Q ss_pred HHHHHHHHhHH
Q 039419 968 AMIKEIKQERE 978 (1035)
Q Consensus 968 ~~L~~~~~~~~ 978 (1035)
+.|+++....+
T Consensus 311 ~~L~~ll~~~~ 321 (336)
T 3g2f_A 311 ERMAELMMIWE 321 (336)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHHHHHH
Confidence 99999875544
No 205
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=350.72 Aligned_cols=262 Identities=18% Similarity=0.273 Sum_probs=191.8
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||+||+|++. +++.||||++........ ...+.+|+.++++++||||++++++
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------~~~~~~E~~~l~~l~h~~iv~~~~~ 68 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA-------------PCTAIREVSLLKDLKHANIVTLHDI 68 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------------------CCCCCCCHHHHSCCCCTTBCCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccccc-------------chhHHHHHHHHHhcCCCCCCeeeeE
Confidence 57889999999999999999876 689999999965432211 1234579999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..++||||++ |+|.+++...+ ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 69 ~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 143 (324)
T 3mtl_A 69 IHTEKSLTLVFEYLD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLAD 143 (324)
T ss_dssp EECSSCEEEEEECCS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECS
T ss_pred EeeCCEEEEEecccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEcc
Confidence 999999999999996 59999887654 3489999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||+++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+....+.
T Consensus 144 fg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~ 219 (324)
T 3mtl_A 144 FGLARAKSIPT--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHFIFRILGT 219 (324)
T ss_dssp SSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCC
T ss_pred CcccccccCCc--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCC
Confidence 99998654322 22234578999999998776 56899999999999999999999999754321 111111111000
Q ss_pred --hhhhcccc----------cCCCcccH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 --IEVLDKSL----------RARPEVEI-----EEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 --~~~~~~~~----------~~~~~~~~-----~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
........ ........ .......+++.+||+.||++|||++|++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 220 PTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000 00000000 001234568889999999999999999884
No 206
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5e-37 Score=362.75 Aligned_cols=255 Identities=22% Similarity=0.260 Sum_probs=202.2
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.+.++|.+.+.||+|+||+||+|.+. +++.||||++....... ...+.+.+|+.++++++||||+++
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpniv~~ 86 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN------------KDTSTILREVELLKKLDHPNIMKL 86 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC------------SCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc------------hHHHHHHHHHHHHHhCCCCCcCeE
Confidence 56788999999999999999999876 68999999985432111 125678999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc---CCC
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG---PEF 838 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~---~~~ 838 (1035)
++++.+.+..|+||||+.+|+|.+++...+. +++..+..++.||+.||+|||+. ||+||||||+||+++ .++
T Consensus 87 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 161 (486)
T 3mwu_A 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161 (486)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTC
T ss_pred EEEEEcCCEEEEEEEcCCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCC
Confidence 9999999999999999999999999877654 89999999999999999999999 999999999999995 456
Q ss_pred ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
.+||+|||+++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+.
T Consensus 162 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~ 235 (486)
T 3mwu_A 162 DIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVE 235 (486)
T ss_dssp CEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred CEEEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH
Confidence 79999999998764432 2235679999999999875 589999999999999999999999975422 12222221
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... ....+........+.+++.+||++||++|||+.|++++
T Consensus 236 ~~~~---------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 236 TGKY---------AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HTCC---------CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred hCCC---------CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1110 00000000111234567888999999999999999985
No 207
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.4e-36 Score=357.23 Aligned_cols=346 Identities=27% Similarity=0.419 Sum_probs=197.5
Q ss_pred CCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccce
Q 039419 52 SLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNL 131 (1035)
Q Consensus 52 ~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 131 (1035)
.+++|+.|+++++.++ .+| .+..+++|++|+|++|.+++ +|. ++.+++|++|+|++|++++ ++. +..+++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIAD-ITP-LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCCEE
T ss_pred HhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCC-chh-hhccccCCEEECCCCcccc-Chh-hcCCCCCCEE
Confidence 4667778888887777 354 37777888888888888773 343 7778888888888888774 333 7777888888
Q ss_pred eccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeeccccc
Q 039419 132 LLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTML 211 (1035)
Q Consensus 132 ~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l 211 (1035)
++++|.+++ ++. +.++++|++|++++|. +. .++ .++.+++|+.|+++ +.+.+.. .++++++|++|++++|.+
T Consensus 118 ~L~~n~l~~-~~~-~~~l~~L~~L~l~~n~-l~-~~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 118 TLFNNQITD-IDP-LKNLTNLNRLELSSNT-IS-DIS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp ECCSSCCCC-CGG-GTTCTTCSEEEEEEEE-EC-CCG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred ECCCCCCCC-ChH-HcCCCCCCEEECCCCc-cC-CCh-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 888887763 333 6777777777777765 11 222 35555566666554 2333221 255666666666666665
Q ss_pred ccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccc
Q 039419 212 SGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSF 291 (1035)
Q Consensus 212 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~ 291 (1035)
.+ + ..+..+++|+.|++++|.+++..| ++.+++|++|++++|++.+. ..+..+++|+.|++++|.+++..+ +
T Consensus 190 ~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 261 (466)
T 1o6v_A 190 SD-I-SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--L 261 (466)
T ss_dssp CC-C-GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CC-C-hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--h
Confidence 52 2 235556666666666666654333 45555556666665555532 235555566666666666554332 5
Q ss_pred cCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCC
Q 039419 292 GNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHP 371 (1035)
Q Consensus 292 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~ 371 (1035)
..+++|++|++++|++.+..+ +..+++|+.|++++|+++.+ + .+..+++|+.|+|++|++++..+
T Consensus 262 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-----------~-~~~~l~~L~~L~L~~n~l~~~~~- 326 (466)
T 1o6v_A 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI-----------S-PISNLKNLTYLTLYFNNISDISP- 326 (466)
T ss_dssp TTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCC-----------G-GGGGCTTCSEEECCSSCCSCCGG-
T ss_pred hcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCc-----------h-hhcCCCCCCEEECcCCcCCCchh-
Confidence 555566666666665554332 55555555555555554421 1 14455555555555555554333
Q ss_pred CcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCcc
Q 039419 372 GLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQF 451 (1035)
Q Consensus 372 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l 451 (1035)
+..+++|++|++++|++++. . .+.++++|++|++++|++++..| +..+++|+.|++++|++
T Consensus 327 -~~~l~~L~~L~l~~n~l~~~--~--------------~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 327 -VSSLTKLQRLFFYNNKVSDV--S--------------SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 387 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC--G--------------GGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEE
T ss_pred -hccCccCCEeECCCCccCCc--h--------------hhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcc
Confidence 44555555555555555432 0 12334445555555555554443 45555555555555555
Q ss_pred CC
Q 039419 452 VG 453 (1035)
Q Consensus 452 ~~ 453 (1035)
++
T Consensus 388 ~~ 389 (466)
T 1o6v_A 388 TN 389 (466)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 208
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-37 Score=363.83 Aligned_cols=196 Identities=23% Similarity=0.301 Sum_probs=154.4
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|.+.+.||+|+||+||+|.+. +++.||||++....... ...+++.+|+.++++++|||||+++++
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~l~~~ 120 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDL------------IDCKRILREIAILNRLNHDHVVKVLDI 120 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCH------------HHHHHHHHHHHHHHhCCCCCCCceEEE
Confidence 67999999999999999999766 58999999986432211 125678999999999999999999999
Q ss_pred EEcC-----CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc
Q 039419 765 CWNR-----NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE 839 (1035)
Q Consensus 765 ~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~ 839 (1035)
+... ...|+||||+ +|+|.++++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.
T Consensus 121 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~ 194 (458)
T 3rp9_A 121 VIPKDVEKFDELYVVLEIA-DSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCS 194 (458)
T ss_dssp CCCSCTTTCCCEEEEECCC-SEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCC
T ss_pred EecCCcccCceEEEEEecc-ccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCC
Confidence 9543 4689999998 679999987654 489999999999999999999999 9999999999999999999
Q ss_pred eEEeeccCccccccCCcc-------------------------ccccccCCcccccCCccc-ccCCCCccccchhHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFA-------------------------RSSNTVAGSYGYIAPEYG-YMMKITEKSDVYSYGVVV 893 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlGvvl 893 (1035)
+||+|||+|+........ ......+||+.|+|||++ .+..++.++|||||||++
T Consensus 195 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il 274 (458)
T 3rp9_A 195 VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIF 274 (458)
T ss_dssp EEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred EeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHH
Confidence 999999999876432110 123456789999999975 566799999999999999
Q ss_pred HHHHhC
Q 039419 894 LEVLTG 899 (1035)
Q Consensus 894 ~elltg 899 (1035)
|||++|
T Consensus 275 ~elltg 280 (458)
T 3rp9_A 275 AELLNM 280 (458)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 999993
No 209
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=7e-37 Score=362.04 Aligned_cols=256 Identities=22% Similarity=0.278 Sum_probs=199.3
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
..+.+.|...+.||+|+||+||+|++. +++.||+|++........ ..+.+.+|+.++++++||||++
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~------------~~~~~~~E~~~l~~l~hpniv~ 100 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS------------SNSKLLEEVAVLKLLDHPNIMK 100 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C------------TTHHHHHHHHHHTTCCCTTBCC
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch------------HHHHHHHHHHHHHhCCCCCCCe
Confidence 345678999999999999999999876 588999999965432221 2467899999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC---C
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP---E 837 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~---~ 837 (1035)
+++++.+.+..|+||||+++|+|.+++..... +++..+..++.||+.||+|||+. ||+||||||+||+++. +
T Consensus 101 ~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 175 (494)
T 3lij_A 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKD 175 (494)
T ss_dssp EEEEEECSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTT
T ss_pred EEEEEEeCCEEEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCC
Confidence 99999999999999999999999999877654 89999999999999999999999 9999999999999976 4
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+.+||+|||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ......+
T Consensus 176 ~~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i 249 (494)
T 3lij_A 176 ALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEILRKV 249 (494)
T ss_dssp CCEEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH
T ss_pred CcEEEEECCCCeECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence 559999999998765432 233567999999999876 5699999999999999999999999975422 1222222
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...... .........+ ..+.+++.+||++||++|||+.|++++
T Consensus 250 ~~~~~~---~~~~~~~~~s------~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 250 EKGKYT---FDSPEWKNVS------EGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHTCCC---CCSGGGTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HhCCCC---CCchhcccCC------HHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 111100 0000011111 223457888999999999999999975
No 210
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.6e-37 Score=339.62 Aligned_cols=253 Identities=23% Similarity=0.320 Sum_probs=201.3
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.+.++|...+.||+|+||+||+|++. +|+.||+|++...... ..+.+.+|+.++++++||||+++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~ 71 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF--------------RDSSLENEIAVLKKIKHENIVTL 71 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------------------HHHHHHHHHHHCCCTTBCCE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc--------------chHHHHHHHHHHHhCCCCCeeeh
Confidence 35678999999999999999999876 6899999999643211 13468899999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE---cCCC
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI---GPEF 838 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll---~~~~ 838 (1035)
++++.+.+..|+||||+++++|.+++...+. +++..+..++.|++.||+|||+. +|+||||||+||++ +.++
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~ 146 (304)
T 2jam_A 72 EDIYESTTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENS 146 (304)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTC
T ss_pred hhhcccCCEEEEEEEcCCCccHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCC
Confidence 9999999999999999999999999977654 89999999999999999999999 99999999999999 7889
Q ss_pred ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
.+||+|||.++..... ......||+.|+|||+..+..++.++||||+|+++|||++|+.||..... ......+.
T Consensus 147 ~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~ 220 (304)
T 2jam_A 147 KIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFEKIK 220 (304)
T ss_dssp CEEBCSCSTTCCCCCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHH
T ss_pred CEEEccCCcceecCCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH
Confidence 9999999998754332 12245689999999999988999999999999999999999999975421 11111111
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... ..........+ ....+++.+||++||++||+++|++++
T Consensus 221 ~~~~---~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 221 EGYY---EFESPFWDDIS------ESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HCCC---CCCTTTTTTSC------HHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCC---CCCccccccCC------HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1100 00000111111 234457888999999999999999874
No 211
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.8e-37 Score=336.49 Aligned_cols=250 Identities=26% Similarity=0.379 Sum_probs=195.8
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
+.|...+.||+|+||+||+|.+. ++..||+|++....... ...+.+.+|+.++++++||||++++++
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~~~ 93 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK------------SERQRFKEEAEMLKGLQHPNIVRFYDS 93 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH------------HHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCH------------HHHHHHHHHHHHHHhCCCCCeeeeeee
Confidence 45777889999999999999775 57899999986533221 135679999999999999999999999
Q ss_pred EEc----CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCC--eeccCCCcccEEEc-CC
Q 039419 765 CWN----RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPP--IVHRDIKANNILIG-PE 837 (1035)
Q Consensus 765 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivHrDikp~NIll~-~~ 837 (1035)
+.. ....++||||+++|+|.+++..... +++..+..++.|++.||+|||+. + |+||||||+||+++ .+
T Consensus 94 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~ 168 (290)
T 1t4h_A 94 WESTVKGKKCIVLVTELMTSGTLKTYLKRFKV--MKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPT 168 (290)
T ss_dssp EEEESSSCEEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTT
T ss_pred eccccCCCceEEEEEEecCCCCHHHHHHHccC--CCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCC
Confidence 875 3457999999999999999987644 89999999999999999999998 7 99999999999997 78
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+.+||+|||++....... .....||+.|+|||+.. ..++.++||||+|+++|+|++|+.||....... ...
T Consensus 169 ~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~ 239 (290)
T 1t4h_A 169 GSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA----QIY 239 (290)
T ss_dssp SCEEECCTTGGGGCCTTS----BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH----HHH
T ss_pred CCEEEeeCCCcccccccc----cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH----HHH
Confidence 999999999997543322 23457999999999876 468999999999999999999999997543211 111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...... ..........+ ..+.+++.+||+.||++||+++|++++
T Consensus 240 ~~~~~~--~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 240 RRVTSG--VKPASFDKVAI------PEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHTTT--CCCGGGGGCCC------HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhcc--CCccccCCCCC------HHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111100 00011111111 124567888999999999999999874
No 212
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.5e-37 Score=346.26 Aligned_cols=266 Identities=18% Similarity=0.218 Sum_probs=192.6
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
...++|...+.||+|+||+||+|.+. +++.||||++....... ...+.+.+|+.++++++||||+++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~ 98 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEE------------GVPGTAIREVSLLKELQHRNIIEL 98 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------------------CHHHHHHGGGCCCTTBCCE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccccc------------ccchhHHHHHHHHHHcCCCCcceE
Confidence 34578999999999999999999765 68999999996543222 124567899999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc-----C
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG-----P 836 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~-----~ 836 (1035)
++++.+++..|+||||++ |+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++ .
T Consensus 99 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 172 (329)
T 3gbz_A 99 KSVIHHNHRLHLIFEYAE-NDLKKYMDKNPD--VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASE 172 (329)
T ss_dssp EEEEEETTEEEEEEECCS-EEHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----
T ss_pred EEEEecCCEEEEEEecCC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCc
Confidence 999999999999999997 599999987654 89999999999999999999999 999999999999994 4
Q ss_pred CCceEEeeccCccccccCCccccccccCCcccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHH
Q 039419 837 EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVD 915 (1035)
Q Consensus 837 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~ 915 (1035)
.+.+||+|||+++...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .....
T Consensus 173 ~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~ 249 (329)
T 3gbz_A 173 TPVLKIGDFGLARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFK 249 (329)
T ss_dssp CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred cceEEECcCCCccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHH
Confidence 5569999999998764332 222345789999999998764 4899999999999999999999999754221 11111
Q ss_pred HHHHhccch-hhh---------cccccCCCcccHH------HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 916 WVRQKRGAI-EVL---------DKSLRARPEVEIE------EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 916 ~~~~~~~~~-~~~---------~~~~~~~~~~~~~------~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
......... ... ............. ......+++.+||++||++|||++|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 250 IFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 111110000 000 0000000000011 11234568889999999999999999874
No 213
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.2e-37 Score=340.44 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=203.8
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.+.|...+.||+|+||.||+|.+. +++.||||++...... ...+.+.+|+.++++++||||+++++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~~ 87 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-------------DEIEDIQQEITVLSQCDSPYVTKYYG 87 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-------------TTHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-------------HHHHHHHHHHHHHHhCCCCCEeEEEE
Confidence 356888999999999999999765 5899999998654322 12568999999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||+++++|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 161 (303)
T 3a7i_A 88 SYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLA 161 (303)
T ss_dssp EEEETTEEEEEEECCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEecCCeEEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEe
Confidence 999999999999999999999998653 389999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
|||.+........ ......||+.|+|||+..+..++.++||||||+++|||++|+.||...... .....+....
T Consensus 162 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~-- 235 (303)
T 3a7i_A 162 DFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNN-- 235 (303)
T ss_dssp CCTTCEECBTTBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSC--
T ss_pred ecccceecCcccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCC--
Confidence 9999987654332 223567999999999999889999999999999999999999999754221 1111111110
Q ss_pred hhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039419 924 IEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMI 970 (1035)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L 970 (1035)
........+. .+..++.+||++||++||++.+++++.
T Consensus 236 ----~~~~~~~~~~------~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 236 ----PPTLEGNYSK------PLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ----CCCCCSSCCH------HHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ----CCCCccccCH------HHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 0111111221 234577889999999999999998854
No 214
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.2e-37 Score=364.51 Aligned_cols=255 Identities=24% Similarity=0.293 Sum_probs=204.4
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
..++|...+.||+|+||+||+|.+. +++.||||++........ ...+.+.+|+.++++++||||++++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hpniv~~~ 92 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK-----------TDKESLLREVQLLKQLDHPNIMKLY 92 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBS-----------SCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccc-----------hHHHHHHHHHHHHHhCCCCCCCcEE
Confidence 4578999999999999999999876 689999999965433221 2357899999999999999999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE---cCCCc
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI---GPEFE 839 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll---~~~~~ 839 (1035)
+++.+.+..|+||||+.+|+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||++ +.++.
T Consensus 93 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 167 (484)
T 3nyv_A 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDAN 167 (484)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHTCSC--CBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCC
T ss_pred EEEEeCCEEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCc
Confidence 999999999999999999999999976544 89999999999999999999999 99999999999999 56789
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
+||+|||+++.+.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+..
T Consensus 168 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~ 241 (484)
T 3nyv_A 168 IRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKKVEK 241 (484)
T ss_dssp EEECCTTHHHHBCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH
T ss_pred EEEEeeeeeEEccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHc
Confidence 9999999998765432 2234579999999999765 689999999999999999999999975422 222222222
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... ...+........+.+++.+||++||++|||+.|++++
T Consensus 242 ~~~~---------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 242 GKYT---------FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CCCC---------CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCC---------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 1100 0000000111233467888999999999999999985
No 215
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.7e-37 Score=373.88 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=195.9
Q ss_pred CeeeeeCCcEEEEEEEC---CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEEEcC
Q 039419 692 SVVGKGCSGIVYRAEME---NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 768 (1035)
Q Consensus 692 ~~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 768 (1035)
+.||+|+||+||+|.+. .++.||||+++...... ...+++.+|+.++++++|||||++++++.+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~------------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 441 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP------------ALKDELLAEANVMQQLDNPYIVRMIGICEA- 441 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCG------------GGHHHHHHHHHHHHHCCCTTBCCEEEEEES-
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCH------------HHHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 47999999999999553 46889999996532211 235789999999999999999999999864
Q ss_pred CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeeccCc
Q 039419 769 NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLA 848 (1035)
Q Consensus 769 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a 848 (1035)
+..++||||+++|+|.++++..+. +++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 442 ~~~~lv~E~~~~g~L~~~l~~~~~--l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla 516 (635)
T 4fl3_A 442 ESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 516 (635)
T ss_dssp SSEEEEEECCTTEEHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHH
T ss_pred CCEEEEEEccCCCCHHHHHhhCCC--CCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCc
Confidence 567899999999999999976543 89999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCc-cccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHHhccchhh
Q 039419 849 KLVVEGDF-ARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQKRGAIEV 926 (1035)
Q Consensus 849 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 926 (1035)
+....... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+....
T Consensus 517 ~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i~~~~----- 589 (635)
T 4fl3_A 517 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLEKGE----- 589 (635)
T ss_dssp HHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTC-----
T ss_pred cccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCC-----
Confidence 87654332 122334557889999999999999999999999999999998 9999975422 12222222111
Q ss_pred hcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 927 LDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
........+ ..+.+++..||+.||++||+++++++.|+++..
T Consensus 590 -~~~~p~~~~------~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 590 -RMGCPAGCP------REMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -CCCCCTTCC------HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCC------HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 000111111 233457888999999999999999999988754
No 216
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-37 Score=350.35 Aligned_cols=260 Identities=23% Similarity=0.300 Sum_probs=192.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +|+.||||++....... ...+++.+|+.++++++||||+++++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~l~~ 91 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSE------------LFAKRAYRELRLLKHMRHENVIGLLD 91 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSH------------HHHHHHHHHHHHHHHCCBTTBCCCSE
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCH------------HHHHHHHHHHHHHHhCCCcCCCCcee
Confidence 467999999999999999999775 58999999986532211 23567899999999999999999999
Q ss_pred EEEcCC------cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 764 CCWNRN------TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 764 ~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
++...+ ..|+||||+ +++|.++++.. .+++..+..++.||++||+|||+. ||+||||||+||+++.+
T Consensus 92 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 164 (367)
T 1cm8_A 92 VFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNED 164 (367)
T ss_dssp EECSCSSTTTCCCCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTT
T ss_pred eEecCCccccCceEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCC
Confidence 997653 459999999 88999998763 389999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDW 916 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~ 916 (1035)
+.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+...
T Consensus 165 ~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i 238 (367)
T 1cm8_A 165 CELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEI 238 (367)
T ss_dssp CCEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH
T ss_pred CCEEEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 99999999999865332 235678999999998776 67999999999999999999999999754221 011111
Q ss_pred HHHhccc-hhhhc-----------ccccCCCccc-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 917 VRQKRGA-IEVLD-----------KSLRARPEVE-----IEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 917 ~~~~~~~-~~~~~-----------~~~~~~~~~~-----~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
+...... .+... ..+....... ........+++.+||+.||++|||++|++++
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 239 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 1100000 00000 0000000000 0011234567888999999999999999884
No 217
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.1e-36 Score=341.49 Aligned_cols=254 Identities=21% Similarity=0.222 Sum_probs=197.7
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~ 763 (1035)
++|...+.||+|+||+||+|.+. +++.||||++... ..+.+.+|+.++++++ ||||+++++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------------~~~~~~~E~~~l~~l~~~~~i~~~~~ 98 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----------------KKKKIKREIKILENLRGGPNIITLAD 98 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----------------CHHHHHHHHHHHHHHTTSTTBCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----------------chHHHHHHHHHHHHcCCCCCEEEeee
Confidence 67999999999999999999764 6899999998532 2467899999999997 999999999
Q ss_pred EEEc--CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC-ce
Q 039419 764 CCWN--RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF-EP 840 (1035)
Q Consensus 764 ~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~-~~ 840 (1035)
++.+ ....++||||+++++|.++++. +++..+..++.||+.||+|||+. ||+||||||+||+++.++ .+
T Consensus 99 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~ 170 (330)
T 3nsz_A 99 IVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKL 170 (330)
T ss_dssp EEECTTTCCEEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEE
T ss_pred eeccCCCCceEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEE
Confidence 9987 5678999999999999998853 78899999999999999999999 999999999999999776 89
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|||+++....... .....||..|+|||+..+ ..++.++|||||||++|||++|+.||................
T Consensus 171 kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~ 247 (330)
T 3nsz_A 171 RLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 247 (330)
T ss_dssp EECCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHH
T ss_pred EEEeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHh
Confidence 9999999987654332 235679999999999876 678999999999999999999999996543322222221111
Q ss_pred hccc--hhhhcc-----------------------cccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 920 KRGA--IEVLDK-----------------------SLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 920 ~~~~--~~~~~~-----------------------~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... .+.+.. ......... ....+.+++.+||++||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGG--CCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCchhhhHHHHhccccccchhhhhhhccccchhhhcccccccc--CCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000 000000 000000000 11234568889999999999999999874
No 218
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-36 Score=340.30 Aligned_cols=263 Identities=20% Similarity=0.253 Sum_probs=197.5
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
..+.++|.+.+.||+|+||.||+|.+. +++.||||++........... .......+.+|+.++++++||||++
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~i~~ 79 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR------EADPALNVETEIEILKKLNHPCIIK 79 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------------CHHHHHHHHHHCCCTTBCC
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccc------cchhhhhHHHHHHHHHhCCCCCCce
Confidence 456688999999999999999999776 488999999976432211000 0012346889999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc-
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE- 839 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~- 839 (1035)
+++++..++ .|+||||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 80 ~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 153 (322)
T 2ycf_A 80 IKNFFDAED-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEED 153 (322)
T ss_dssp EEEEEESSS-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSS
T ss_pred EeeEEcCCc-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCC
Confidence 999987655 899999999999999987654 489999999999999999999999 9999999999999987664
Q ss_pred --eEEeeccCccccccCCccccccccCCcccccCCcccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHH
Q 039419 840 --PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIV 914 (1035)
Q Consensus 840 --~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~ 914 (1035)
+||+|||+++...... ......||+.|+|||++. ...++.++|||||||++|+|++|+.||....... ...
T Consensus 154 ~~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~ 229 (322)
T 2ycf_A 154 CLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLK 229 (322)
T ss_dssp CCEEECCCTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHH
T ss_pred CeEEEccCccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHH
Confidence 9999999998764432 122456899999999863 5678899999999999999999999997543321 222
Q ss_pred HHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 915 DWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..+...... ..+...... ...+.+++.+||+.||++||++.+++++
T Consensus 230 ~~~~~~~~~---~~~~~~~~~------~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 230 DQITSGKYN---FIPEVWAEV------SEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHHHHTCCC---CCHHHHTTS------CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhCccc---cCchhhhhc------CHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 222211100 000011111 1234567888999999999999999874
No 219
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9.4e-37 Score=361.88 Aligned_cols=266 Identities=23% Similarity=0.290 Sum_probs=201.3
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.+.+.|.+.+.||+|+||+||+|.+. +++.||||++........... ..........+.+.+|+.++++++||||+++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~-~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYS-DDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC-----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhccccccc-ccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 35678999999999999999999876 478999999976443221000 0001111346789999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC---
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF--- 838 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~--- 838 (1035)
++++.+.+..|+||||++||+|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999999977654 89999999999999999999999 999999999999998776
Q ss_pred ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
.+||+|||+++...... ......||+.|+|||++. ..++.++||||+||++|+|++|..||..... ......+.
T Consensus 187 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~ 260 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--QDIIKKVE 260 (504)
T ss_dssp SEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH
T ss_pred cEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH
Confidence 69999999998765432 223567999999999876 4689999999999999999999999975422 12222221
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..... .........+ ..+.+++.+||++||++|||++|++++
T Consensus 261 ~~~~~---~~~~~~~~~s------~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 261 KGKYY---FDFNDWKNIS------DEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HCCCC---CCHHHHTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCCC---CCccccCCCC------HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11100 0000001111 234567888999999999999999875
No 220
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-37 Score=347.62 Aligned_cols=272 Identities=23% Similarity=0.275 Sum_probs=195.4
Q ss_pred HHHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCcee
Q 039419 681 VEQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIV 759 (1035)
Q Consensus 681 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 759 (1035)
+....++|...+.||+|+||.||+|.+. +|+.||||++.......... ...+.+.+|+.++++++||||+
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~~iv 75 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKD---------GINRTALREIKLLQELSHPNII 75 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------------CTHHHHHHHHHHHCCCTTBC
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhh---------hhhHHHHHHHHHHhhCCCCCCC
Confidence 4455678999999999999999999876 58999999996543221110 1235788999999999999999
Q ss_pred eEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCc
Q 039419 760 RFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFE 839 (1035)
Q Consensus 760 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~ 839 (1035)
++++++.+.+..++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 76 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~ 150 (346)
T 1ua2_A 76 GLLDAFGHKSNISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGV 150 (346)
T ss_dssp CEEEEECCTTCCEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCC
T ss_pred eEEEEEeeCCceEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCC
Confidence 999999999999999999975 8988887643 3478889999999999999999999 9999999999999999999
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
+||+|||+++...... .......||+.|+|||+..+. .++.++|||||||++|||++|..||...... ..+.....
T Consensus 151 ~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~ 227 (346)
T 1ua2_A 151 LKLADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFE 227 (346)
T ss_dssp EEECCCGGGSTTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH
T ss_pred EEEEecccceeccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHH
Confidence 9999999998764432 223356799999999988654 5889999999999999999999998754221 11111111
Q ss_pred Hhccc-hhhhccc--------ccCCCcccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 QKRGA-IEVLDKS--------LRARPEVEIE-----EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~~~~~-~~~~~~~--------~~~~~~~~~~-----~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..... .+..... ....+..... ....+.+++.+||+.||++|||++|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 228 TLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 11100 0000000 0000000011 01234568888999999999999999885
No 221
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.1e-37 Score=350.38 Aligned_cols=200 Identities=26% Similarity=0.463 Sum_probs=175.5
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||+||+|.+. +++.||+|++...... ...+.+.+|+.++++++||||++++++
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~~~~ 99 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-------------AIRNQIIRELQVLHECNSPYIVGFYGA 99 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCH-------------HHHHHHHHHHGGGGGCCCTTBCCEEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCH-------------HHHHHHHHHHHHHHHCCCCCEEEEeEE
Confidence 57889999999999999999876 5899999998654221 235689999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||+++++|.+++...+. +++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|
T Consensus 100 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~D 175 (360)
T 3eqc_A 100 FYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCD 175 (360)
T ss_dssp EEETTEEEEEECCCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECC
T ss_pred EEECCEEEEEEECCCCCCHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEE
Confidence 9999999999999999999999987654 899999999999999999999841 799999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCC
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPT 906 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~ 906 (1035)
||+++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 176 fg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 176 FGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CCCCHHHHHH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCCCcccccc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999765432 223467999999999999999999999999999999999999999754
No 222
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.4e-37 Score=378.91 Aligned_cols=252 Identities=21% Similarity=0.279 Sum_probs=202.7
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFL 762 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~ 762 (1035)
.++|...+.||+|+||.||+|+++ +++.||||++........ ...+.+..|..++..+ +||+|++++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~-----------~~~~~~~~E~~~l~~~~~~~~i~~l~ 408 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-----------DDVECTMVEKRVLALPGKPPFLTQLH 408 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHT-----------TTTHHHHHHHHHHTCTTCCTTBCCEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccH-----------HHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 467999999999999999999876 488999999965322111 1246788999999988 799999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+.+..|+||||++||+|.++++..+. +++..+..++.||+.||+|||+. +|+||||||+|||++.++++||
T Consensus 409 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~--~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL 483 (674)
T 3pfq_A 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKI 483 (674)
T ss_dssp EECBCSSEEEEEEECCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEE
T ss_pred EEEEeCCEEEEEEeCcCCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEE
Confidence 999999999999999999999999987654 89999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
+|||+|+...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 484 ~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~~~i~~~~- 558 (674)
T 3pfq_A 484 ADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHN- 558 (674)
T ss_dssp CCCTTCEECCCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHSSC-
T ss_pred eecceeeccccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCC-
Confidence 9999998643332 223467899999999999999999999999999999999999999975421 11111111100
Q ss_pred chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 039419 923 AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTM-----KDVAAM 969 (1035)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~-----~el~~~ 969 (1035)
.......+ ..+.+++.+||++||++||++ +||+++
T Consensus 559 ------~~~p~~~s------~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 559 ------VAYPKSMS------KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ------CCCCTTSC------HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ------CCCCccCC------HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 00111111 234557888999999999997 666653
No 223
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=349.74 Aligned_cols=256 Identities=20% Similarity=0.267 Sum_probs=183.8
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~ 763 (1035)
.+|...+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+.+++++. ||||+++++
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~~h~~iv~~~~ 93 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE--------------EKNRAIIQEVCFMKKLSGHPNIVQFCS 93 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSH--------------HHHHHHHHHHHHHHHHTTSTTBCCEEE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCch--------------HHHHHHHHHHHHHHHhccCCChhhccc
Confidence 47889999999999999999875 589999999854321 12467899999999996 999999999
Q ss_pred EEEc--------CCcceEEEEeCCCCChhhhhhhc-CCCCCCHHHHHHHHHHHHHHHHHhhccCCCC--eeccCCCcccE
Q 039419 764 CCWN--------RNTRLLMYDYMPNGSLGSLLHER-RDSCLEWELRYRIILGAAQGLAYLHHDCVPP--IVHRDIKANNI 832 (1035)
Q Consensus 764 ~~~~--------~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivHrDikp~NI 832 (1035)
++.. ....++||||+. |+|.+++... ....+++..+..++.||+.||+|||+. + |+||||||+||
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NI 169 (337)
T 3ll6_A 94 AASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENL 169 (337)
T ss_dssp EEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGC
T ss_pred cccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccE
Confidence 9942 334789999995 7999988652 234589999999999999999999998 7 99999999999
Q ss_pred EEcCCCceEEeeccCccccccCCccc----------cccccCCcccccCCccc---ccCCCCccccchhHHHHHHHHHhC
Q 039419 833 LIGPEFEPYIADFGLAKLVVEGDFAR----------SSNTVAGSYGYIAPEYG---YMMKITEKSDVYSYGVVVLEVLTG 899 (1035)
Q Consensus 833 ll~~~~~~kl~DFG~a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlGvvl~elltg 899 (1035)
+++.++.+||+|||+++......... ......||+.|+|||++ .+..++.++||||||+++|||++|
T Consensus 170 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g 249 (337)
T 3ll6_A 170 LLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR 249 (337)
T ss_dssp EECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHS
T ss_pred EECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhC
Confidence 99999999999999998765432111 11245699999999987 566788999999999999999999
Q ss_pred CCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHh
Q 039419 900 KQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQE 976 (1035)
Q Consensus 900 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~ 976 (1035)
+.||...... ...... .........+.. +..++.+||+.||++||++.|++++|+.+...
T Consensus 250 ~~p~~~~~~~-----~~~~~~------~~~~~~~~~~~~------~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 250 QHPFEDGAKL-----RIVNGK------YSIPPHDTQYTV------FHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp SCCC-----------------------CCCCTTCCSSGG------GHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcchhHH-----HhhcCc------ccCCcccccchH------HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999743211 111110 000001111111 23577789999999999999999999988654
No 224
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.3e-37 Score=337.74 Aligned_cols=248 Identities=19% Similarity=0.270 Sum_probs=196.5
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRF 761 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l 761 (1035)
..++|...+.||+|+||+||+|.+. +++.||||++........ ....+.+|+..+.++ +||||+++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------~~~~~~~e~~~~~~l~~h~~iv~~ 76 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV------------DEQNALREVYAHAVLGQHSHVVRY 76 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH------------HHHHHHHHHHHHHHSCSCTTBCCE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccH------------HHHHHHHHHHHHHHhCCCCCeeee
Confidence 4578999999999999999999876 689999999865432221 246788999999999 89999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCC--CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC--
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRD--SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE-- 837 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~-- 837 (1035)
++++.+.+..++||||+++|+|.+++..... ..+++..+..++.||++||+|||+. +|+||||||+||+++.+
T Consensus 77 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~ 153 (289)
T 1x8b_A 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSI 153 (289)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----
T ss_pred eeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCC
Confidence 9999999999999999999999999976532 4489999999999999999999999 99999999999999844
Q ss_pred -----------------CceEEeeccCccccccCCccccccccCCcccccCCcccccC-CCCccccchhHHHHHHHHHhC
Q 039419 838 -----------------FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTG 899 (1035)
Q Consensus 838 -----------------~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~elltg 899 (1035)
..+||+|||.+...... ....||+.|+|||+..+. .++.++||||||+++|||++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~ 227 (289)
T 1x8b_A 154 PNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGA 227 (289)
T ss_dssp ----------------CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTC
T ss_pred CcccccccccccccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcC
Confidence 47999999999865432 234699999999998765 566899999999999999999
Q ss_pred CCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 900 KQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 900 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..|+... .....+.. .. .+......+ ..+.+++.+||++||++||++.|++++
T Consensus 228 ~~~~~~~-----~~~~~~~~--~~----~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 228 EPLPRNG-----DQWHEIRQ--GR----LPRIPQVLS------QEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp CCCCSSS-----HHHHHHHT--TC----CCCCSSCCC------HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCcch-----hHHHHHHc--CC----CCCCCcccC------HHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 8776422 11111111 00 011111111 123457888999999999999999874
No 225
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8e-37 Score=337.59 Aligned_cols=265 Identities=25% Similarity=0.329 Sum_probs=200.4
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||+||+|++. +++.||||++....... ...+.+.+|+.++++++||||++++++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~i~~~~~~ 70 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE------------GVPSTAIREISLLKELNHPNIVKLLDV 70 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------------------CCHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccch------------hhHHHHHHHHHHHHHcCCCCeeeEEEE
Confidence 57889999999999999999876 68999999986543211 124678899999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+++..|+||||+. ++|.+++.......+++..+..++.|+++||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 71 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d 146 (299)
T 2r3i_A 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLAD 146 (299)
T ss_dssp EEETTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECS
T ss_pred EecCCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECc
Confidence 999999999999997 6999999877655689999999999999999999999 999999999999999999999999
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCC-CCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMK-ITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA 923 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~ 923 (1035)
||.+....... .......||+.|+|||+..+.. ++.++||||||+++|||++|+.||...... .......+.....
T Consensus 147 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~ 223 (299)
T 2r3i_A 147 FGLARAFGVPV--RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTP 223 (299)
T ss_dssp TTHHHHHCCCS--BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCC
T ss_pred chhhhhccCCc--cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCC
Confidence 99998764332 1223457899999999987655 789999999999999999999999754321 1111111111111
Q ss_pred hhhh----------cccccCCCcccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 924 IEVL----------DKSLRARPEVEIE-----EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 924 ~~~~----------~~~~~~~~~~~~~-----~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.+.. ............. ......+++.+||++||++||++.|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0000000000000 01234568888999999999999999874
No 226
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=9.6e-37 Score=354.19 Aligned_cols=203 Identities=22% Similarity=0.280 Sum_probs=167.9
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
+.++|...+.||+|+||+||+|.+. +++.||||++....... ...+++.+|+.++++++||||++++
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~nIv~l~ 91 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDL------------IDCKRILREITILNRLKSDYIIRLY 91 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSH------------HHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcCh------------HHHHHHHHHHHHHHHcCCCCcceEE
Confidence 3468999999999999999999776 48899999996432211 1256889999999999999999999
Q ss_pred eEEEcC-----CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 763 GCCWNR-----NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 763 ~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
+++... +..|+||||+. |+|.++++... .+++..+..++.||++||+|||+. +|+||||||+|||++.+
T Consensus 92 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~ 165 (432)
T 3n9x_A 92 DLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQD 165 (432)
T ss_dssp EECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTT
T ss_pred EEEecCCCCcCCeEEEEEecCC-cCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCC
Confidence 999776 56899999985 69999997654 389999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCccccccCCcc--------------------ccccccCCcccccCCccc-ccCCCCccccchhHHHHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFA--------------------RSSNTVAGSYGYIAPEYG-YMMKITEKSDVYSYGVVVLEV 896 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlGvvl~el 896 (1035)
+.+||+|||+|+........ ......+||+.|+|||++ ....++.++||||+||++|||
T Consensus 166 ~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~el 245 (432)
T 3n9x_A 166 CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245 (432)
T ss_dssp CCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred CCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHH
Confidence 99999999999876543211 123467899999999985 566799999999999999999
Q ss_pred HhCCCCCC
Q 039419 897 LTGKQPID 904 (1035)
Q Consensus 897 ltg~~P~~ 904 (1035)
++|..||.
T Consensus 246 l~g~~p~~ 253 (432)
T 3n9x_A 246 LNMLQSHI 253 (432)
T ss_dssp HTTCTTTC
T ss_pred Hhcccccc
Confidence 98665554
No 227
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-36 Score=354.83 Aligned_cols=361 Identities=21% Similarity=0.210 Sum_probs=180.3
Q ss_pred CCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCC
Q 039419 93 GVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIG 172 (1035)
Q Consensus 93 ~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~ 172 (1035)
..+..++.+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ +| ++.+++|++|++++|
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N------------ 95 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSN------------ 95 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS------------
T ss_pred ccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCC------------
Confidence 344445555555555555555553 33 45555555555555555552 22 444444444444444
Q ss_pred CccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHh
Q 039419 173 DCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKM 252 (1035)
Q Consensus 173 ~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 252 (1035)
.+++. + ++.+++|++|++++|.+++ +| ++.+++|+.|++++|.+++. + ++.+++|++|
T Consensus 96 -------------~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L 153 (457)
T 3bz5_A 96 -------------KLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTEL 153 (457)
T ss_dssp -------------CCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEE
T ss_pred -------------CCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEE
Confidence 34332 1 4445555555555555543 22 44555555555555555532 1 4444555555
Q ss_pred hcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhh
Q 039419 253 LLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQIS 332 (1035)
Q Consensus 253 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 332 (1035)
++++|+..+.+ .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++. .+..+++|++|++++|+|+
T Consensus 154 ~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~ 225 (457)
T 3bz5_A 154 DCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT 225 (457)
T ss_dssp ECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCS
T ss_pred ECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccc
Confidence 55555333233 24455555555555555553 22 44555555555555555543 2444455555555554443
Q ss_pred hhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccC
Q 039419 333 VFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFG 412 (1035)
Q Consensus 333 ~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~ 412 (1035)
. +| +..+++|+.|++++|++++.. +..+++|+.|++++|+
T Consensus 226 ~-----------ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~------------------------ 265 (457)
T 3bz5_A 226 E-----------ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTD------------------------ 265 (457)
T ss_dssp C-----------CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCC------------------------
T ss_pred c-----------cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCC------------------------
Confidence 1 22 444455555555555555332 2233444444444432
Q ss_pred CCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEE
Q 039419 413 NCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSL 492 (1035)
Q Consensus 413 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 492 (1035)
|+.|++++|.+.+.+| +..+++|+.|++++|++.+.+|. ...+|+.|++++| ++|++|
T Consensus 266 ----L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L 323 (457)
T 3bz5_A 266 ----LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYL 323 (457)
T ss_dssp ----CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEE
T ss_pred ----CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEE
Confidence 4455555555544443 34455566666666655444432 1223333333322 345555
Q ss_pred EcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCc
Q 039419 493 DLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFT 572 (1035)
Q Consensus 493 ~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~ 572 (1035)
+|++|+|++ ++ +..+..+ ..|++++|+|++ ++.|..|++++|++.+. ..+..|..+++++|+|+
T Consensus 324 ~L~~N~l~~-l~--l~~l~~L-~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~----~~~~~l~~l~l~~N~l~ 387 (457)
T 3bz5_A 324 YLNNTELTE-LD--VSHNTKL-KSLSCVNAHIQD--------FSSVGKIPALNNNFEAE----GQTITMPKETLTNNSLT 387 (457)
T ss_dssp ECTTCCCSC-CC--CTTCTTC-SEEECCSSCCCB--------CTTGGGSSGGGTSEEEE----EEEEECCCBCCBTTBEE
T ss_pred ECCCCcccc-cc--cccCCcC-cEEECCCCCCCC--------ccccccccccCCcEEec----ceeeecCccccccCcEE
Confidence 555555553 22 2232222 245555555543 24566667788877765 24556778899999999
Q ss_pred ccCCCh
Q 039419 573 GYLPDS 578 (1035)
Q Consensus 573 ~~~p~~ 578 (1035)
|.+|..
T Consensus 388 g~ip~~ 393 (457)
T 3bz5_A 388 IAVSPD 393 (457)
T ss_dssp EECCTT
T ss_pred EEcChh
Confidence 988863
No 228
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=345.92 Aligned_cols=259 Identities=22% Similarity=0.316 Sum_probs=197.6
Q ss_pred hccccCCeeeeeCCcEEEEEEE-CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEM-ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++++++||||++++++
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv~~~~~ 94 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQ--------------QDREEAQREADMHRLFNHPNILRLVAY 94 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSH--------------HHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCH--------------HHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 6799999999999999999987 4689999999854221 125678999999999999999999999
Q ss_pred EEc----CCcceEEEEeCCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 765 CWN----RNTRLLMYDYMPNGSLGSLLHER--RDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 765 ~~~----~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
+.. ....|+||||+++|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 95 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~ 171 (317)
T 2buj_A 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEG 171 (317)
T ss_dssp EEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTS
T ss_pred EEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCC
Confidence 873 34679999999999999998763 234589999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCccccccCCcc-------ccccccCCcccccCCcccccCC---CCccccchhHHHHHHHHHhCCCCCCCCCC
Q 039419 839 EPYIADFGLAKLVVEGDFA-------RSSNTVAGSYGYIAPEYGYMMK---ITEKSDVYSYGVVVLEVLTGKQPIDPTIP 908 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlGvvl~elltg~~P~~~~~~ 908 (1035)
.+||+|||.++........ .......||+.|+|||++.+.. ++.++||||||+++|||++|+.||.....
T Consensus 172 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 251 (317)
T 2buj_A 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251 (317)
T ss_dssp CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH
T ss_pred CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc
Confidence 9999999998765321110 0012345799999999976544 68899999999999999999999953211
Q ss_pred CchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHH
Q 039419 909 EGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEI 973 (1035)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~ 973 (1035)
........+.. .......... ...+..++.+||+.||++||++.+++++|+.+
T Consensus 252 ~~~~~~~~~~~----------~~~~~~~~~~--~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~ 304 (317)
T 2buj_A 252 KGDSVALAVQN----------QLSIPQSPRH--SSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304 (317)
T ss_dssp TTSCHHHHHHC----------C--CCCCTTS--CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred ccchhhHHhhc----------cCCCCccccC--CHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence 11111111110 0000000011 12345578889999999999999999999876
No 229
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-37 Score=340.30 Aligned_cols=255 Identities=21% Similarity=0.332 Sum_probs=199.8
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +++.||+|++....... ...+.+.+|+.++++++||||+++++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~i~~~~~ 72 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE------------AEKQMLVSEVNLLRELKHPNIVRYYD 72 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCH------------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCH------------HHHHHHHHHHHHHHhcCCCCCCeEEE
Confidence 467899999999999999999876 58999999996543222 12567999999999999999999999
Q ss_pred EEEc--CCcceEEEEeCCCCChhhhhhhcC--CCCCCHHHHHHHHHHHHHHHHHhhccCCCC-----eeccCCCcccEEE
Q 039419 764 CCWN--RNTRLLMYDYMPNGSLGSLLHERR--DSCLEWELRYRIILGAAQGLAYLHHDCVPP-----IVHRDIKANNILI 834 (1035)
Q Consensus 764 ~~~~--~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivHrDikp~NIll 834 (1035)
++.+ .+..|+||||+++++|.+++.... ...+++..+..++.|++.||+|||+. + |+||||||+||++
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~ 149 (279)
T 2w5a_A 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFL 149 (279)
T ss_dssp EEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEE
T ss_pred EEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEE
Confidence 8854 567899999999999999997643 24489999999999999999999998 7 9999999999999
Q ss_pred cCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHH
Q 039419 835 GPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIV 914 (1035)
Q Consensus 835 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~ 914 (1035)
+.++.+||+|||.++....... ......||+.|+|||+..+..++.++||||||+++|+|++|+.||..... ....
T Consensus 150 ~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~ 225 (279)
T 2w5a_A 150 DGKQNVKLGDFGLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELA 225 (279)
T ss_dssp CSSSCEEECCCCHHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH
T ss_pred cCCCCEEEecCchheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHH
Confidence 9999999999999987644321 12245689999999999888899999999999999999999999975421 1222
Q ss_pred HHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Q 039419 915 DWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMI 970 (1035)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L 970 (1035)
..+.... ........+ ..+.+++.+||+.||++||++.|+++++
T Consensus 226 ~~i~~~~------~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 226 GKIREGK------FRRIPYRYS------DELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp HHHHHTC------CCCCCTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred HHHhhcc------cccCCcccC------HHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 2221110 001111111 1234578889999999999999998854
No 230
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.5e-37 Score=344.68 Aligned_cols=265 Identities=22% Similarity=0.350 Sum_probs=197.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|++.. ++.||||++....... ...+.+.+|+.++++++||||+++++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~~ 91 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDK------------MVKKIAMREIKLLKQLRHENLVNLLE 91 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCH------------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCch------------HHHHHHHHHHHHHhhCCCCCEeeEEE
Confidence 4789999999999999999998764 8999999986543221 23567889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||||+++++|.++...... +++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 92 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~ 166 (331)
T 4aaa_A 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLC 166 (331)
T ss_dssp EEEETTEEEEEEECCSEEHHHHHHHSTTC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEEC
T ss_pred EeecCCEEEEEEecCCcchHHHHHhhccC--CCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEE
Confidence 99999999999999999999888765443 89999999999999999999999 99999999999999999999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhcc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRG 922 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 922 (1035)
|||.++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ...........
T Consensus 167 Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 243 (331)
T 4aaa_A 167 DFGFARTLAAPG--EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGN 243 (331)
T ss_dssp CCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCS
T ss_pred eCCCceeecCCc--cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCC
Confidence 999998654432 122345799999999998765 78999999999999999999999997543211 11111111000
Q ss_pred c--------------hhhhcccccCCCcc---cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 923 A--------------IEVLDKSLRARPEV---EIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 923 ~--------------~~~~~~~~~~~~~~---~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
. .....+......+. .......+.+++.+||++||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 244 LIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 00000000000000 00011234568888999999999999999984
No 231
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=359.46 Aligned_cols=345 Identities=22% Similarity=0.189 Sum_probs=221.6
Q ss_pred ceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCcc
Q 039419 203 SLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNF 282 (1035)
Q Consensus 203 ~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 282 (1035)
.++.+++.++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3444455554 4554442 456666666666666556666666666777777666666666667777777777777777
Q ss_pred CCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccC
Q 039419 283 FSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSH 362 (1035)
Q Consensus 283 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~ 362 (1035)
+++..+..|.++++|++|+|++|++.+..+..|.++++|++|+|++|+|+.+ .+..|.++++|+.|+|++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~----------~~~~~~~l~~L~~L~l~~ 161 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYI----------SHRAFSGLNSLEQLTLEK 161 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEE----------CTTSSTTCTTCCEEEEES
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCcccee----------ChhhccCCCCCCEEECCC
Confidence 7655555667777777777777777766666677777777777777666532 345666777777777777
Q ss_pred cCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCcc
Q 039419 363 NALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQ 442 (1035)
Q Consensus 363 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 442 (1035)
|.+++..+..|..+++|+.|+|++|.+.+..+..+. .+++|++|++++|.+.+.+|.......+|+
T Consensus 162 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~--------------~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~ 227 (477)
T 2id5_A 162 CNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFK--------------RLYRLKVLEISHWPYLDTMTPNCLYGLNLT 227 (477)
T ss_dssp CCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSC--------------SCTTCCEEEEECCTTCCEECTTTTTTCCCS
T ss_pred CcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcc--------------cCcccceeeCCCCccccccCcccccCcccc
Confidence 777755555566777777777777777655544433 345577777777766655555555556777
Q ss_pred EEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceeeccCc
Q 039419 443 VLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWN 522 (1035)
Q Consensus 443 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N 522 (1035)
.|+|++|+++++++..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++.
T Consensus 228 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-------------------- 287 (477)
T 2id5_A 228 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV-------------------- 287 (477)
T ss_dssp EEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEE--------------------
T ss_pred EEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceE--------------------
Confidence 777777777766666777777777777777777766666777777777777777777632
Q ss_pred cCCCCCCccccCCccccEEeccCCcccCccc-cccccCCCcEEeccCCcCcccCCChhhhhccccccccccccCCCCC
Q 039419 523 ALSGAIPPQISALNKLSILDLSHNKLGGDLL-ALSGLDNLVSLNVSYNNFTGYLPDSKLFRQLSATEMAGNQGLCSRG 599 (1035)
Q Consensus 523 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~ 599 (1035)
.|..|..+++|++|+|++|+|++.+. .|..+++|+.|+|++|+|++.++....+.......+.++...|..|
T Consensus 288 -----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 288 -----EPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp -----CTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred -----CHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 23344555666666666666665443 4555666666666666666544433233334445556666666654
No 232
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.5e-37 Score=354.91 Aligned_cols=251 Identities=17% Similarity=0.189 Sum_probs=189.7
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHH---HHHhcCCCCceee
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEI---KTLGSIRHKNIVR 760 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~---~~l~~l~hpniv~ 760 (1035)
.++|...+.||+|+||+||+|.+. +|+.||||++........ ...+.+.+|+ .++++++|||||+
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~l~~l~~l~hpniv~ 140 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPS-----------NAIKQMKEEVLRLRLLRGIKNQKQAK 140 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCT-----------THHHHHHHHHHGGGGSTTCCSHHHHH
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccch-----------HHHHHHHHHHHHHHhccccCCHHHHH
Confidence 367888999999999999999864 589999999964322221 2357899999 5555668999999
Q ss_pred EE-------eEEEcCCc-----------------ceEEEEeCCCCChhhhhhhcCCC-----CCCHHHHHHHHHHHHHHH
Q 039419 761 FL-------GCCWNRNT-----------------RLLMYDYMPNGSLGSLLHERRDS-----CLEWELRYRIILGAAQGL 811 (1035)
Q Consensus 761 l~-------~~~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~-----~l~~~~~~~i~~~ia~~L 811 (1035)
++ +++.+++. .|+||||+ +|+|.+++...+.. .+++..+..++.||++||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL 219 (377)
T 3byv_A 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLL 219 (377)
T ss_dssp HHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHH
Confidence 98 66665542 78999999 68999999865321 123588888999999999
Q ss_pred HHhhccCCCCeeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccC-----------CC
Q 039419 812 AYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-----------KI 880 (1035)
Q Consensus 812 ~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~ 880 (1035)
+|||+. +|+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .+
T Consensus 220 ~~LH~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~ 290 (377)
T 3byv_A 220 ASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLM 290 (377)
T ss_dssp HHHHHT---TEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEEC
T ss_pred HHHHhC---CeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccC
Confidence 999999 999999999999999999999999999985322 2234567 999999998877 89
Q ss_pred CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCC
Q 039419 881 TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDR 960 (1035)
Q Consensus 881 ~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~R 960 (1035)
+.++|||||||++|||++|+.||........ ...+.... ...+ ..+.+++.+||+.||++|
T Consensus 291 ~~~~DvwSlG~il~elltg~~Pf~~~~~~~~------------~~~~~~~~-~~~~------~~~~~li~~~L~~dp~~R 351 (377)
T 3byv_A 291 TFSFDAWALGLVIYWIWCADLPITKDAALGG------------SEWIFRSC-KNIP------QPVRALLEGFLRYPKEDR 351 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCC------CC------------SGGGGSSC-CCCC------HHHHHHHHHHTCSSGGGC
T ss_pred ChhhhHHHHHHHHHHHHHCCCCCcccccccc------------hhhhhhhc-cCCC------HHHHHHHHHHcCCCchhC
Confidence 9999999999999999999999965322110 00111110 1111 123457888999999999
Q ss_pred CCHHHHHH--HHHHHHH
Q 039419 961 PTMKDVAA--MIKEIKQ 975 (1035)
Q Consensus 961 Ps~~el~~--~L~~~~~ 975 (1035)
|++.|+++ .++++..
T Consensus 352 pt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 352 LLPLQAMETPEYEQLRT 368 (377)
T ss_dssp CCHHHHHTSHHHHHHHH
T ss_pred CCHHHHhhChHHHHHHH
Confidence 99999997 4454443
No 233
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=340.53 Aligned_cols=269 Identities=27% Similarity=0.401 Sum_probs=205.1
Q ss_pred hccccCCeeeeeCCcEEEEEEE-----CCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEM-----ENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
++|...+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|+.++++++||||++
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv~ 106 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE--------------EHLRDFEREIEILKSLQHDNIVK 106 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS--------------HHHHHHHHHHHHHHTCCCTTBCC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH--------------HHHHHHHHHHHHHHhCCCCCeee
Confidence 5688899999999999999984 3589999999865321 12467999999999999999999
Q ss_pred EEeEEEcCC--cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 761 FLGCCWNRN--TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 761 l~~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
+++++...+ ..++||||+++++|.+++...+ ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 107 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~ 182 (326)
T 2w1i_A 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENEN 182 (326)
T ss_dssp EEEEECC----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETT
T ss_pred EEEEEEecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCC
Confidence 999987654 7899999999999999997654 3489999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCccccccCCcc-ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
.+||+|||+++........ .......++..|+|||+..+..++.++||||||+++|||++|..||..... .+....
T Consensus 183 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~ 259 (326)
T 2w1i_A 183 RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMI 259 (326)
T ss_dssp EEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHH
T ss_pred cEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhh
Confidence 9999999999876543321 122345678889999998888899999999999999999999999863210 000000
Q ss_pred HHhcc-------chhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 918 RQKRG-------AIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 918 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
..... ..+.+........+..+ ...+..++.+||+.||++||++.|+++.|+.+..+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 260 GNDKQGQMIVFHLIELLKNNGRLPRPDGC--PDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCCCCCCTTC--CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHhhcCCCCCCCCcc--cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 00000 00011111011111111 123455788899999999999999999999987653
No 234
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.3e-37 Score=355.54 Aligned_cols=198 Identities=23% Similarity=0.253 Sum_probs=173.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC------CCCc
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI------RHKN 757 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~hpn 757 (1035)
..+|.+.+.||+|+||+||+|.+. +++.||||++.... ...+.+.+|+.+++.+ +|+|
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~---------------~~~~~~~~E~~~l~~l~~~~~~~~~~ 160 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK---------------RFHRQAAEEIRILEHLRKQDKDNTMN 160 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH---------------HHHHHHHHHHHHHHHHHTTCTTSCSC
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc---------------chHHHHHHHHHHHHHHhhccccCCcC
Confidence 457999999999999999999766 48999999996421 1235677888888877 5779
Q ss_pred eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 758 IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
|+++++++...+..++||||+. ++|.+++.......+++..+..++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 161 iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~ 236 (429)
T 3kvw_A 161 VIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQ 236 (429)
T ss_dssp BCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESST
T ss_pred EEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccC
Confidence 9999999999999999999995 6999999887666699999999999999999999999 99999999999999998
Q ss_pred Cc--eEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCC
Q 039419 838 FE--PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPT 906 (1035)
Q Consensus 838 ~~--~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~ 906 (1035)
+. +||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 237 ~~~~vkL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 237 GRSGIKVIDFGSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcceEEeecccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 87 999999999754322 23567999999999999999999999999999999999999999754
No 235
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=338.96 Aligned_cols=253 Identities=24% Similarity=0.363 Sum_probs=197.0
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
...+.|...+.||+|+||.||+|.+. +|+.||||++.... ..+.+.+|+.++++++||||+++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~e~~~l~~l~h~~i~~~ 89 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----------------DLQEIIKEISIMQQCDSPHVVKY 89 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----------------CCHHHHHHHHHHHTCCCTTBCCE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----------------HHHHHHHHHHHHHhCCCCCCccE
Confidence 34578999999999999999999876 48999999986421 13578999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++++.+.+..|+||||+++++|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+|
T Consensus 90 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 165 (314)
T 3com_A 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAK 165 (314)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEE
T ss_pred EEEEEeCCEEEEEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEE
Confidence 999999999999999999999999997433 3489999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhc
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKR 921 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 921 (1035)
|+|||.+....... .......||+.|+|||+..+..++.++||||||+++|+|++|+.||...... .....+....
T Consensus 166 l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~ 241 (314)
T 3com_A 166 LADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--RAIFMIPTNP 241 (314)
T ss_dssp ECCCTTCEECBTTB--SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSC
T ss_pred Eeecccchhhhhhc--cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHhcCC
Confidence 99999998764432 1233567999999999999889999999999999999999999999754221 1111111100
Q ss_pred cchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 922 GAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..... .+... ...+.+++.+||+.||++||++.+++++
T Consensus 242 ------~~~~~--~~~~~--~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 242 ------PPTFR--KPELW--SDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ------CCCCS--SGGGS--CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ------CcccC--CcccC--CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000 00001 1123457888999999999999999874
No 236
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2e-37 Score=340.94 Aligned_cols=261 Identities=25% Similarity=0.378 Sum_probs=193.8
Q ss_pred hccccCCeeeeeCCcEEEEEEEC--CCc--EEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME--NGE--VIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
++|...+.||+|+||+||+|++. +++ .||||++........ ...+.+.+|+.++++++||||+++
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~ 86 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP-----------EAMDDFIREVNAMHSLDHRNLIRL 86 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------C-----------HHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCH-----------HHHHHHHHHHHHHHhCCCCCcccE
Confidence 67899999999999999999753 233 689999865432221 235789999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++++.++. .++||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~k 161 (291)
T 1u46_A 87 YGVVLTPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVK 161 (291)
T ss_dssp EEEECSSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEE
T ss_pred EEEEccCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEE
Confidence 99998765 889999999999999997653 3388999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccccCCcc-ccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 842 IADFGLAKLVVEGDFA-RSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
|+|||+++........ .......+|..|+|||+..+..++.++||||||+++|||++ |+.||..... ......+..
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~ 239 (291)
T 1u46_A 162 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--SQILHKIDK 239 (291)
T ss_dssp ECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHT
T ss_pred EccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--HHHHHHHHc
Confidence 9999999876543321 12234567889999999888889999999999999999999 9999975422 111111111
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQ 975 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~ 975 (1035)
... ........+ ..+.+++.+||+.||++||++.++++.|+++.+
T Consensus 240 ~~~-----~~~~~~~~~------~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 240 EGE-----RLPRPEDCP------QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp SCC-----CCCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred cCC-----CCCCCcCcC------HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 100 000011111 234557888999999999999999999988754
No 237
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.9e-36 Score=342.58 Aligned_cols=266 Identities=23% Similarity=0.312 Sum_probs=199.9
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|++. +|+.||||++....... .....+.+|+.++++++||||+++++
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~~ 83 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE------------GFPITALREIKILQLLKHENVVNLIE 83 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS------------SSCHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc------------cchHHHHHHHHHHHhccCCCcccHhh
Confidence 478999999999999999999874 68999999986543222 12457889999999999999999999
Q ss_pred EEEcC--------CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc
Q 039419 764 CCWNR--------NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG 835 (1035)
Q Consensus 764 ~~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~ 835 (1035)
++.+. +..|+||||+++ +|.+.+.... ..+++..+..++.||+.||+|||+. ||+||||||+||+++
T Consensus 84 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~ 158 (351)
T 3mi9_A 84 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLIT 158 (351)
T ss_dssp EEEEC--------CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred eeeccccccccCCceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEc
Confidence 99873 457999999964 7777776543 3389999999999999999999999 999999999999999
Q ss_pred CCCceEEeeccCccccccCCc--cccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchh
Q 039419 836 PEFEPYIADFGLAKLVVEGDF--ARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLH 912 (1035)
Q Consensus 836 ~~~~~kl~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~ 912 (1035)
.++.+||+|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .
T Consensus 159 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~ 236 (351)
T 3mi9_A 159 RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--H 236 (351)
T ss_dssp TTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--H
T ss_pred CCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--H
Confidence 999999999999987653221 122345678999999998765 45799999999999999999999999754321 1
Q ss_pred HHHHHHHhccc-h-hhhccc----------ccCCCcccHHH-------HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 913 IVDWVRQKRGA-I-EVLDKS----------LRARPEVEIEE-------MLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 913 ~~~~~~~~~~~-~-~~~~~~----------~~~~~~~~~~~-------~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
....+...... . +..... ..........+ .....+++.+||+.||++|||++|++++
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 237 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 11111111110 0 000000 00000001111 1235678899999999999999999885
No 238
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.5e-36 Score=352.20 Aligned_cols=348 Identities=25% Similarity=0.375 Sum_probs=187.9
Q ss_pred cccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCce
Q 039419 148 KLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVD 227 (1035)
Q Consensus 148 ~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 227 (1035)
.+++|+.|++.+|. ...+| .+..+++|++|++++|.+.+..+ ++++++|++|++++|.+.+..+ +.++++|++
T Consensus 44 ~l~~l~~L~l~~~~--i~~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 44 DLDQVTTLQADRLG--IKSID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHTCCEEECCSSC--CCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred HhccccEEecCCCC--CccCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 45666666666664 22233 24445555555555555543322 4455555555555555442222 444555555
Q ss_pred EEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCcc
Q 039419 228 LFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNI 307 (1035)
Q Consensus 228 L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 307 (1035)
|++++|.++ +..+ +.++++|++|++++|.+++ .+ .+.++++|++|+++ |.+
T Consensus 117 L~L~~n~l~------------------------~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~ 167 (466)
T 1o6v_A 117 LTLFNNQIT------------------------DIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQV 167 (466)
T ss_dssp EECCSSCCC------------------------CCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESC
T ss_pred EECCCCCCC------------------------CChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-Ccc
Confidence 555555444 3211 4444455555555554442 12 24444555555543 233
Q ss_pred ccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEecccc
Q 039419 308 SGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISN 387 (1035)
Q Consensus 308 ~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 387 (1035)
.+.. .+.++++|++|++++|+++.+ ..+..+++|++|++++|.+++..+ +..+++|++|++++|
T Consensus 168 ~~~~--~~~~l~~L~~L~l~~n~l~~~------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 231 (466)
T 1o6v_A 168 TDLK--PLANLTTLERLDISSNKVSDI------------SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGN 231 (466)
T ss_dssp CCCG--GGTTCTTCCEEECCSSCCCCC------------GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred cCch--hhccCCCCCEEECcCCcCCCC------------hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCC
Confidence 2221 144455555555555544321 124455555555555555554333 444555555555555
Q ss_pred ccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccch
Q 039419 388 GISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNR 467 (1035)
Q Consensus 388 ~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 467 (1035)
++++. ..+..+++|++|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.
T Consensus 232 ~l~~~----------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 291 (466)
T 1o6v_A 232 QLKDI----------------GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTN 291 (466)
T ss_dssp CCCCC----------------GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred Ccccc----------------hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCe
Confidence 55432 113334556666666666654433 5555666666666666665433 555666666
Q ss_pred hhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCc
Q 039419 468 LILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNK 547 (1035)
Q Consensus 468 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 547 (1035)
|++++|++++..+ +..+++|++|+|++|++++..| +..+..+ ..|++++|.+++. +.+..+++|++|+|++|+
T Consensus 292 L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L-~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKL-QRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTC-CEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred EEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccC-CEeECCCCccCCc--hhhccCCCCCEEeCCCCc
Confidence 6666666654333 5556666666666666654433 2222222 3566666666554 467788999999999999
Q ss_pred ccCccccccccCCCcEEeccCCcCcccC
Q 039419 548 LGGDLLALSGLDNLVSLNVSYNNFTGYL 575 (1035)
Q Consensus 548 l~~~~~~~~~l~~L~~L~ls~N~l~~~~ 575 (1035)
+.+.++ +..+++|+.|++++|++++.+
T Consensus 365 l~~~~~-~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 365 ISDLTP-LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp CCBCGG-GTTCTTCCEEECCCEEEECCC
T ss_pred cCccch-hhcCCCCCEEeccCCcccCCc
Confidence 988766 888999999999999998753
No 239
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.7e-36 Score=345.28 Aligned_cols=260 Identities=22% Similarity=0.231 Sum_probs=190.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +++.||||++....... ...+.+.+|+.+++.++||||+++++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpniv~~~~ 91 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ------------THAKRAYRELVLMKCVNHKNIIGLLN 91 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCCh------------HHHHHHHHHHHHHHhcCCCCccceEE
Confidence 468999999999999999999765 58999999986532211 12467889999999999999999999
Q ss_pred EEEcCC------cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 764 CCWNRN------TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 764 ~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
++...+ ..|+||||++ |+|.+++.. .+++..+..++.||+.||+|||+. ||+||||||+||+++.+
T Consensus 92 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~ 163 (371)
T 2xrw_A 92 VFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSD 163 (371)
T ss_dssp EECSCCSTTTCCEEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTT
T ss_pred eeccccccccccceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCC
Confidence 997665 6799999996 578888753 288999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+
T Consensus 164 ~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i 238 (371)
T 2xrw_A 164 CTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--DQWNKV 238 (371)
T ss_dssp SCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH
T ss_pred CCEEEEEeeccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 999999999998654322 223467999999999999889999999999999999999999999754221 111111
Q ss_pred HHhccc--hhh--------------------------hccc-ccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 039419 918 RQKRGA--IEV--------------------------LDKS-LRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAA 968 (1035)
Q Consensus 918 ~~~~~~--~~~--------------------------~~~~-~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~ 968 (1035)
....+. .+. .... ..............+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 239 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000000 000 0000 00000001112345667899999999999999999998
Q ss_pred H
Q 039419 969 M 969 (1035)
Q Consensus 969 ~ 969 (1035)
+
T Consensus 319 h 319 (371)
T 2xrw_A 319 H 319 (371)
T ss_dssp S
T ss_pred C
Confidence 5
No 240
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.1e-37 Score=347.79 Aligned_cols=276 Identities=21% Similarity=0.307 Sum_probs=206.0
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCccccccc---ccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDC---QNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
.++|...+.||+|+||.||+|.+ +++.||||++........... ...........+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36799999999999999999988 899999999965432211100 00111111223789999999999999999999
Q ss_pred EeEEEcCCcceEEEEeCCCCChhhh------hhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-cCCCCeeccCCCcccEEE
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSLGSL------LHERRDSCLEWELRYRIILGAAQGLAYLHH-DCVPPIVHRDIKANNILI 834 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivHrDikp~NIll 834 (1035)
++++.+.+..|+||||+++|+|.++ +.......+++..+..++.|++.||+|||+ . ||+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999999 665435669999999999999999999999 8 99999999999999
Q ss_pred cCCCceEEeeccCccccccCCccccccccCCcccccCCcccccC-CCCc-cccchhHHHHHHHHHhCCCCCCCCCCCchh
Q 039419 835 GPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-KITE-KSDVYSYGVVVLEVLTGKQPIDPTIPEGLH 912 (1035)
Q Consensus 835 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~SlGvvl~elltg~~P~~~~~~~~~~ 912 (1035)
+.++.+||+|||.+...... ......||+.|+|||+..+. .++. ++||||||+++|||++|+.||...... ..
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~ 260 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VE 260 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HH
Confidence 99999999999999876443 22356799999999998876 5666 999999999999999999999754332 22
Q ss_pred HHHHHHHhccchhhhcc-cccCCCc-----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 913 IVDWVRQKRGAIEVLDK-SLRARPE-----VEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
....+............ ....... ........+.+++.+||+.||++||+++|++++
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22222111100000000 0000000 000011234567888999999999999999884
No 241
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=332.44 Aligned_cols=252 Identities=27% Similarity=0.361 Sum_probs=194.1
Q ss_pred ccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEE
Q 039419 687 CLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCC 765 (1035)
Q Consensus 687 ~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~ 765 (1035)
+|.....||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.+++.++||||+++++++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 88 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS--------------RYSQPLHEEIALHKHLKHKNIVQYLGSF 88 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-----------------HHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch--------------HHHHHHHHHHHHHHhCCCCCEeeEeeEE
Confidence 3445569999999999999875 588999999864321 1246789999999999999999999999
Q ss_pred EcCCcceEEEEeCCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC-CCceEEe
Q 039419 766 WNRNTRLLMYDYMPNGSLGSLLHERRD-SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP-EFEPYIA 843 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~-~~~~kl~ 843 (1035)
.+.+..++||||+++++|.+++..... ..+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~ 165 (295)
T 2clq_A 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKIS 165 (295)
T ss_dssp EETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEEC
T ss_pred EeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEe
Confidence 999999999999999999999976532 3467888999999999999999999 9999999999999987 8999999
Q ss_pred eccCccccccCCccccccccCCcccccCCcccccCC--CCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhc
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMK--ITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKR 921 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 921 (1035)
|||.++...... .......||+.|+|||+..+.. ++.++||||||+++|||++|+.||............. ..
T Consensus 166 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~- 240 (295)
T 2clq_A 166 DFGTSKRLAGIN--PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV--GM- 240 (295)
T ss_dssp CTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH--HH-
T ss_pred ecccccccCCCC--CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh--cc-
Confidence 999998764422 1223567999999999976543 7899999999999999999999996432211111100 00
Q ss_pred cchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 922 GAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...........+ ..+..++.+||+.||++||++.+++++
T Consensus 241 ---~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 241 ---FKVHPEIPESMS------AEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ---HCCCCCCCTTSC------HHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ---ccccccccccCC------HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 001111111111 123457888999999999999999873
No 242
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-36 Score=347.73 Aligned_cols=260 Identities=21% Similarity=0.267 Sum_probs=191.9
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
..++|...+.||+|+||+||+|.+. +|+.||||++.... ....+|+.+++.++||||++++
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------------------~~~~~E~~il~~l~hpnIv~l~ 66 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP------------------RYKNRELDIMKVLDHVNIIKLV 66 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT------------------TSCCHHHHHHTTCCCTTBCCEE
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc------------------chHHHHHHHHHHcCCCCccchh
Confidence 3468999999999999999999764 68999999985421 1123799999999999999999
Q ss_pred eEEEcC--------------------------------------CcceEEEEeCCCCChhhhhhh--cCCCCCCHHHHHH
Q 039419 763 GCCWNR--------------------------------------NTRLLMYDYMPNGSLGSLLHE--RRDSCLEWELRYR 802 (1035)
Q Consensus 763 ~~~~~~--------------------------------------~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~ 802 (1035)
+++... ...++||||++ |+|.+.+.. .....+++..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~ 145 (383)
T 3eb0_A 67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISI 145 (383)
T ss_dssp EEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHH
T ss_pred heeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHH
Confidence 998543 34789999997 588877764 2334589999999
Q ss_pred HHHHHHHHHHHhhccCCCCeeccCCCcccEEEc-CCCceEEeeccCccccccCCccccccccCCcccccCCcccccC-CC
Q 039419 803 IILGAAQGLAYLHHDCVPPIVHRDIKANNILIG-PEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-KI 880 (1035)
Q Consensus 803 i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~-~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~ 880 (1035)
++.||++||+|||+. ||+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++.+. .+
T Consensus 146 i~~qi~~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~ 219 (383)
T 3eb0_A 146 YIYQLFRAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEY 219 (383)
T ss_dssp HHHHHHHHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSC
T ss_pred HHHHHHHHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCC
Confidence 999999999999999 999999999999998 68899999999998764433 22356789999999987764 48
Q ss_pred CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccc-hhhh---ccc-----ccCCCcccHH------HHHHH
Q 039419 881 TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGA-IEVL---DKS-----LRARPEVEIE------EMLQT 945 (1035)
Q Consensus 881 ~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~-----~~~~~~~~~~------~~~~~ 945 (1035)
+.++||||+||++|||++|+.||...... ......+...... .+.+ .+. .......... ....+
T Consensus 220 ~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3eb0_A 220 TPSIDLWSIGCVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLA 298 (383)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHH
T ss_pred CcchhhhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHH
Confidence 99999999999999999999999754321 1112222111000 0000 000 0000000000 11234
Q ss_pred HHHHHhccCCCCCCCCCHHHHHHH
Q 039419 946 LGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 946 l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.+++.+||+.||++|||+.|++++
T Consensus 299 ~~li~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 299 IDLLEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCCCHHHHhcC
Confidence 568888999999999999999974
No 243
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9.6e-37 Score=349.70 Aligned_cols=260 Identities=21% Similarity=0.308 Sum_probs=191.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
..+|...+.||+|+||+||+|++..+..||+|++..... ...+|+++++.++||||++++++
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------------------~~~~E~~il~~l~h~niv~l~~~ 100 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------------------FKNRELQIMRIVKHPNVVDLKAF 100 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------------------SCCHHHHHHHTCCCTTBCCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------------------hHHHHHHHHHhCCCCCcceEEEE
Confidence 357899999999999999999998877899999854221 12369999999999999999999
Q ss_pred EEcCCc------ceEEEEeCCCCChhhhhhh-cCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc-C
Q 039419 765 CWNRNT------RLLMYDYMPNGSLGSLLHE-RRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG-P 836 (1035)
Q Consensus 765 ~~~~~~------~~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~-~ 836 (1035)
+...+. .++||||++++.+...... .....+++..+..++.||++||+|||+. ||+||||||+||+++ .
T Consensus 101 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~ 177 (394)
T 4e7w_A 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPP 177 (394)
T ss_dssp EEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETT
T ss_pred EEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCC
Confidence 965443 7899999976544333321 1234589999999999999999999999 999999999999999 7
Q ss_pred CCceEEeeccCccccccCCccccccccCCcccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHH
Q 039419 837 EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVD 915 (1035)
Q Consensus 837 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~ 915 (1035)
++.+||+|||+|+....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....
T Consensus 178 ~~~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~ 253 (394)
T 4e7w_A 178 SGVLKLIDFGSAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVE 253 (394)
T ss_dssp TTEEEECCCTTCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred CCcEEEeeCCCcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH
Confidence 99999999999987644332 2356789999999987654 5899999999999999999999999754321 11122
Q ss_pred HHHHhccc-hh---hhc-----ccccCCCcccHH------HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 916 WVRQKRGA-IE---VLD-----KSLRARPEVEIE------EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 916 ~~~~~~~~-~~---~~~-----~~~~~~~~~~~~------~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.++..... .+ ... ............ ....+.+++.+||++||++|||+.|++++
T Consensus 254 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 254 IIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 21110000 00 000 000000000001 11245668889999999999999999875
No 244
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=354.43 Aligned_cols=201 Identities=25% Similarity=0.351 Sum_probs=155.2
Q ss_pred hcccc-CCeeeeeCCcEEEEEEEC---CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 686 KCLVE-DSVVGKGCSGIVYRAEME---NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 686 ~~~~~-~~~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
+.|.. .++||+|+||+||+|+++ +++.||||++.... ..+.+.+|+.++++++||||+++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~E~~~l~~l~hpniv~~ 83 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG----------------ISMSACREIALLRELKHPNVISL 83 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS----------------CCHHHHHHHHHHHHCCCTTBCCC
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC----------------CCHHHHHHHHHHHhcCCCCeeeE
Confidence 45665 568999999999999876 47899999985432 23468899999999999999999
Q ss_pred EeEEEc--CCcceEEEEeCCCCChhhhhhhcC-------CCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccE
Q 039419 762 LGCCWN--RNTRLLMYDYMPNGSLGSLLHERR-------DSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNI 832 (1035)
Q Consensus 762 ~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NI 832 (1035)
++++.. ....|+||||+. |+|.+++...+ ...+++..+..++.||+.||+|||+. +|+||||||+||
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NI 159 (405)
T 3rgf_A 84 QKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANI 159 (405)
T ss_dssp CEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred eeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHe
Confidence 999964 567899999995 58888876332 12489999999999999999999999 999999999999
Q ss_pred EE----cCCCceEEeeccCccccccCCc-cccccccCCcccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCC
Q 039419 833 LI----GPEFEPYIADFGLAKLVVEGDF-ARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPT 906 (1035)
Q Consensus 833 ll----~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~elltg~~P~~~~ 906 (1035)
|+ +.++.+||+|||+|+....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 160 ll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 160 LVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99 6788999999999987644321 1223456799999999998764 5899999999999999999999999754
No 245
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.3e-37 Score=341.39 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=183.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +++.||||++...... ...+.+.+|+.++++++||||+++++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~~ 80 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ-------------TSMDELLKEIQAMSQCHHPNIVSYYT 80 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------------------CCCCCCCTTBCCEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc-------------hhHHHHHHHHHHHhhcCCCCEeeEEE
Confidence 367889999999999999999764 5899999998653221 12456889999999999999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhc------CCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHER------RDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
++...+..++||||+++++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 81 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~ 157 (303)
T 2vwi_A 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGED 157 (303)
T ss_dssp EEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTT
T ss_pred EEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCC
Confidence 999999999999999999999998742 234589999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCccccccCCc---cccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhH
Q 039419 838 FEPYIADFGLAKLVVEGDF---ARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHI 913 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~ 913 (1035)
+.+||+|||.+........ ........||+.|+|||+..+ ..++.++||||||+++|||++|+.||........
T Consensus 158 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-- 235 (303)
T 2vwi_A 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-- 235 (303)
T ss_dssp CCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--
T ss_pred CCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--
Confidence 9999999999986643321 112234579999999998765 5689999999999999999999999976533221
Q ss_pred HHHHHHhcc-chh--hhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 914 VDWVRQKRG-AIE--VLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 914 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
......... ... ..........+ ..+.+++.+||+.||++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 236 LMLTLQNDPPSLETGVQDKEMLKKYG------KSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HHHHHTSSCCCTTC-----CCCCCCC------HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhccCCCccccccccchhhhhhh------HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111111000 000 00001111111 123457888999999999999999874
No 246
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=7.2e-37 Score=338.47 Aligned_cols=254 Identities=21% Similarity=0.334 Sum_probs=195.1
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
..+.|.+.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.++++++||||++++
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~~i~~~~ 82 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--------------EELEDYIVEIEILATCDHPYIVKLL 82 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------------------CCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--------------HHHHHHHHHHHHHhcCCCCCEeeee
Confidence 3467899999999999999999886 489999999864321 1256789999999999999999999
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++.+.+..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||
T Consensus 83 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 158 (302)
T 2j7t_A 83 GAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRL 158 (302)
T ss_dssp EEEECC-CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred eeeeeCCeEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEE
Confidence 99999999999999999999999987643 3389999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCccc-----ccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYG-----YMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+|||++....... .......||+.|+|||+. .+..++.++||||||+++|+|++|+.||...... .....+
T Consensus 159 ~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~ 234 (302)
T 2j7t_A 159 ADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKI 234 (302)
T ss_dssp CCCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHH
T ss_pred EECCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHH
Confidence 9999876432211 112345799999999987 4667889999999999999999999999754221 111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..... +.. ..+... ...+..++.+||+.||++||++.+++++
T Consensus 235 ~~~~~------~~~--~~~~~~--~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 235 AKSDP------PTL--LTPSKW--SVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHSCC------CCC--SSGGGS--CHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred hccCC------ccc--CCcccc--CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 10000 000 001111 1123457888999999999999999873
No 247
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.6e-36 Score=341.81 Aligned_cols=264 Identities=23% Similarity=0.259 Sum_probs=198.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +++.||||++...... ...+.+.+|+.++++++||||+++++
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~ 92 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-------------TYCQRTLREIKILLRFRHENIIGIND 92 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCH-------------HHHHHHHHHHHHHHHCCCTTBCCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCc-------------HHHHHHHHHHHHHHhcCCCCCcccee
Confidence 357999999999999999999765 5889999999643211 12467899999999999999999999
Q ss_pred EEEcC-----CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 764 CCWNR-----NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 764 ~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
++... ...|+||||+. |+|.++++... +++..+..++.||+.||+|||+. ||+||||||+||+++.++
T Consensus 93 ~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~ 165 (364)
T 3qyz_A 93 IIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTC 165 (364)
T ss_dssp EECCSSTTTCCCEEEEEECCS-EEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTC
T ss_pred EEecCCccccceEEEEEcccC-cCHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCC
Confidence 99765 36799999996 59999987643 89999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCccccccCCcc-ccccccCCcccccCCcccc-cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHH
Q 039419 839 EPYIADFGLAKLVVEGDFA-RSSNTVAGSYGYIAPEYGY-MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDW 916 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~ 916 (1035)
.+||+|||.++........ .......||+.|+|||++. +..++.++||||+||++|||++|+.||....... .....
T Consensus 166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i 244 (364)
T 3qyz_A 166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHI 244 (364)
T ss_dssp CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHH
T ss_pred CEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHH
Confidence 9999999999876543221 1234568999999999865 4458999999999999999999999997653221 11111
Q ss_pred HHHhcc-chhhhc-----------ccccCCCcccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 917 VRQKRG-AIEVLD-----------KSLRARPEVEIE-----EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 917 ~~~~~~-~~~~~~-----------~~~~~~~~~~~~-----~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
+..... ..+... ............ ....+.+++.+||++||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 110000 000000 000000000000 01234568889999999999999999875
No 248
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.5e-36 Score=337.59 Aligned_cols=253 Identities=22% Similarity=0.272 Sum_probs=192.9
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC--CCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR--HKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l~~ 763 (1035)
++|.+.+.||+|+||.||+|.+.+++.||||++....... ...+.+.+|+.++++++ ||||+++++
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~E~~~l~~l~~~~~~iv~~~~ 95 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN------------QTLDSYRNEIAYLNKLQQHSDKIIRLYD 95 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCH------------HHHHHHHHHHHHHHHHGGGCTTBCCEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccc------------cchHHHHHHHHHHHhccccCCceEEEEE
Confidence 6799999999999999999998889999999996543221 13567899999999997 599999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEe
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIA 843 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~ 843 (1035)
++.+.+..|+||| +.+++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+
T Consensus 96 ~~~~~~~~~lv~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~ 168 (313)
T 3cek_A 96 YEITDQYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLI 168 (313)
T ss_dssp EEECSSEEEEEEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEEC
T ss_pred EeecCCEEEEEEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEe
Confidence 9999999999999 55889999998754 389999999999999999999999 9999999999999964 899999
Q ss_pred eccCccccccCCccccccccCCcccccCCccccc-----------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchh
Q 039419 844 DFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-----------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLH 912 (1035)
Q Consensus 844 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~ 912 (1035)
|||+++...............||+.|+|||+..+ ..++.++||||||+++|||++|+.||.........
T Consensus 169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 248 (313)
T 3cek_A 169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248 (313)
T ss_dssp CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH
T ss_pred eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH
Confidence 9999987654433223345679999999998765 46888999999999999999999999754321111
Q ss_pred HHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 913 IVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... .+.......+.... ..+.+++.+||+.||++||+++|++++
T Consensus 249 ~~~~----------~~~~~~~~~~~~~~--~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 249 LHAI----------IDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHH----------HCTTSCCCCCCCSC--HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHH----------HhcccccCCcccch--HHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1111 11111111111111 123457788999999999999999985
No 249
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.3e-36 Score=343.44 Aligned_cols=266 Identities=21% Similarity=0.287 Sum_probs=186.6
Q ss_pred HHHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCcee
Q 039419 681 VEQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIV 759 (1035)
Q Consensus 681 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv 759 (1035)
.....++|.+.+.||+|+||+||+|++. +++.||||++..... ....+.+|+..++.++||||+
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~~~~~l~~l~h~niv 82 (360)
T 3e3p_A 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---------------FRNRELQIMQDLAVLHHPNIV 82 (360)
T ss_dssp HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---------------CCCHHHHHHHHHHHHCCTTBC
T ss_pred chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---------------ccHHHHHHHHHHHhcCCCCcc
Confidence 4566789999999999999999999875 589999999854321 123567888889999999999
Q ss_pred eEEeEEEcCCc-------ceEEEEeCCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHhh--ccCCCCeeccCCC
Q 039419 760 RFLGCCWNRNT-------RLLMYDYMPNGSLGSLLHE--RRDSCLEWELRYRIILGAAQGLAYLH--HDCVPPIVHRDIK 828 (1035)
Q Consensus 760 ~l~~~~~~~~~-------~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~~~~ivHrDik 828 (1035)
++++++...+. .++||||+++ +|...+.. .....+++..+..++.|++.||+||| +. +|+|||||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlk 158 (360)
T 3e3p_A 83 QLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIK 158 (360)
T ss_dssp CEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCC
T ss_pred cHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCC
Confidence 99999976443 7899999976 55544432 22345889999999999999999999 87 99999999
Q ss_pred cccEEEcC-CCceEEeeccCccccccCCccccccccCCcccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCC
Q 039419 829 ANNILIGP-EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPT 906 (1035)
Q Consensus 829 p~NIll~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~elltg~~P~~~~ 906 (1035)
|+||+++. ++.+||+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 159 p~NIll~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 159 PHNVLVNEADGTLKLCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp GGGEEEETTTTEEEECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHHEEEeCCCCcEEEeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 99999997 8999999999998765433 22356789999999987654 4899999999999999999999999764
Q ss_pred CCCchhHHHHHHHhccc-hhhhccc--------cc---CCC------cccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 039419 907 IPEGLHIVDWVRQKRGA-IEVLDKS--------LR---ARP------EVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAA 968 (1035)
Q Consensus 907 ~~~~~~~~~~~~~~~~~-~~~~~~~--------~~---~~~------~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~ 968 (1035)
... ......++..... .+..... .. ..+ .........+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 236 NSA-GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp SHH-HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ChH-HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 321 1111121111000 0000000 00 000 000012234567889999999999999999987
Q ss_pred H
Q 039419 969 M 969 (1035)
Q Consensus 969 ~ 969 (1035)
+
T Consensus 315 h 315 (360)
T 3e3p_A 315 H 315 (360)
T ss_dssp S
T ss_pred C
Confidence 4
No 250
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.7e-37 Score=347.54 Aligned_cols=259 Identities=24% Similarity=0.303 Sum_probs=181.5
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +|+.||||++....... ...+++.+|+.+++.++||||+++++
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~hpnIv~~~~ 95 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI------------IHAKRTYRELRLLKHMKHENVIGLLD 95 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCH------------HHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 478999999999999999999765 58999999986532211 12567889999999999999999999
Q ss_pred EEEcC------CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 764 CCWNR------NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 764 ~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
++... ...|+||||+ +++|.++++.. .+++..+..++.||++||+|||+. ||+||||||+||+++.+
T Consensus 96 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~ 168 (367)
T 2fst_X 96 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNED 168 (367)
T ss_dssp EECSCSSGGGCCCCEEEEECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred EEecCCccccCCeEEEEeccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCC
Confidence 99754 5579999999 78999988753 389999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDW 916 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~ 916 (1035)
+.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......
T Consensus 169 ~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~ 241 (367)
T 2fst_X 169 CELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKL 241 (367)
T ss_dssp CCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHH
T ss_pred CCEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH
Confidence 99999999999865332 234679999999999776 6789999999999999999999999975422 111111
Q ss_pred HHHh-cc-chhhhc-----------ccccCCCcccHHH-----HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 917 VRQK-RG-AIEVLD-----------KSLRARPEVEIEE-----MLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 917 ~~~~-~~-~~~~~~-----------~~~~~~~~~~~~~-----~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
+... .. ..+... ..+...+...... .....+++.+||..||++|||+.|++++
T Consensus 242 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 1110 00 000000 0011111111111 1234668889999999999999999885
No 251
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.6e-36 Score=350.70 Aligned_cols=258 Identities=25% Similarity=0.339 Sum_probs=190.1
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
..|...+.||+|+||+||+|++. +++.||||++.... ..+.+|++++++++|||||+++++
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------------------~~~~~E~~il~~l~hpniv~l~~~ 115 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------------------RFKNRELQIMRKLDHCNIVRLRYF 115 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------------------TSCCHHHHHHHTCCCTTBCCEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------------------hhHHHHHHHHHHcCCCCccceeeE
Confidence 35888899999999999999886 58999999985421 112379999999999999999999
Q ss_pred EEcCC------cceEEEEeCCCCChhhhhhh--cCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC
Q 039419 765 CWNRN------TRLLMYDYMPNGSLGSLLHE--RRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP 836 (1035)
Q Consensus 765 ~~~~~------~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~ 836 (1035)
+...+ ..++||||+++ ++.+.+.. .....+++..+..++.||++||+|||+. +|+||||||+|||++.
T Consensus 116 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~ 191 (420)
T 1j1b_A 116 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDP 191 (420)
T ss_dssp EEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEET
T ss_pred EeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeC
Confidence 85421 35789999975 67666543 2234589999999999999999999998 9999999999999996
Q ss_pred C-CceEEeeccCccccccCCccccccccCCcccccCCcccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHH
Q 039419 837 E-FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIV 914 (1035)
Q Consensus 837 ~-~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~ 914 (1035)
+ +.+||+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+.
T Consensus 192 ~~~~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~ 267 (420)
T 1j1b_A 192 DTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLV 267 (420)
T ss_dssp TTTEEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHH
T ss_pred CCCeEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHH
Confidence 5 5789999999987644322 2346789999999998654 789999999999999999999999975422 11222
Q ss_pred HHHHHhcc-chhhh---ccc-----ccCCCcccHH------HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 915 DWVRQKRG-AIEVL---DKS-----LRARPEVEIE------EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 915 ~~~~~~~~-~~~~~---~~~-----~~~~~~~~~~------~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..++.... ..+.+ .+. +......... ....+.+++.+||+.||++||++.|++++
T Consensus 268 ~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 22221100 00000 000 0000000000 11245678889999999999999999874
No 252
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.7e-37 Score=352.08 Aligned_cols=257 Identities=12% Similarity=0.023 Sum_probs=179.4
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC--CCCceeeEE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI--RHKNIVRFL 762 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~l~ 762 (1035)
..|...+.||+|+||+||+|.+. +++.||||++........ ...+.+.+|+.+++.+ +||||++++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~E~~~~~~l~~~hp~iv~~~ 130 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSR-----------SELERLHEATFAAARLLGESPEEARDR 130 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHH-----------HHHHHHHHHHHHHHHHHC---------
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccc-----------cHHHHHHHHHHHHHHhcccChhhhhhc
Confidence 45888999999999999999876 689999999976543222 1245777885544444 699988865
Q ss_pred -------eEEEcCC-----------------cceEEEEeCCCCChhhhhhhcCCCCCCHHHH------HHHHHHHHHHHH
Q 039419 763 -------GCCWNRN-----------------TRLLMYDYMPNGSLGSLLHERRDSCLEWELR------YRIILGAAQGLA 812 (1035)
Q Consensus 763 -------~~~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~~L~ 812 (1035)
+++..++ ..|+||||++ |+|.+++...+.. +++..+ ..++.||++||+
T Consensus 131 ~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~vk~~i~~qi~~aL~ 208 (371)
T 3q60_A 131 RRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFV-YVFRGDEGILALHILTAQLIRLAA 208 (371)
T ss_dssp -CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccc-cchhhhhhhhhHHHHHHHHHHHHH
Confidence 5554332 3799999998 8999999875332 455555 678899999999
Q ss_pred HhhccCCCCeeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCccccc--CCCCccccchhHH
Q 039419 813 YLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM--MKITEKSDVYSYG 890 (1035)
Q Consensus 813 ~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlG 890 (1035)
|||++ +|+||||||+|||++.++.+||+|||+++...... ....||+.|+|||++.+ ..++.++||||||
T Consensus 209 ~LH~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG 280 (371)
T 3q60_A 209 NLQSK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLG 280 (371)
T ss_dssp HHHHT---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHH
T ss_pred HHHHC---CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHH
Confidence 99999 99999999999999999999999999998653321 13456799999999877 6799999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 891 VVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 891 vvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
|++|||++|+.||....+..... |. ...................+ ...+.+++.+||++||++||++.|++++
T Consensus 281 ~il~elltg~~Pf~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 281 LSIYRVWCLFLPFGLVTPGIKGS--WK--RPSLRVPGTDSLAFGSCTPL--PDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp HHHHHHHHSSCSTTBCCTTCTTC--CC--BCCTTSCCCCSCCCTTSSCC--CHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred HHHHHHHhCCCCCCCcCcccccc--hh--hhhhhhccccccchhhccCC--CHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 99999999999998653321100 00 00000000000000000011 1233457888999999999999999873
No 253
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.1e-36 Score=332.68 Aligned_cols=255 Identities=20% Similarity=0.314 Sum_probs=185.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|+..+.||+|+||+||+|++. +++.||||++........ ..+.+.++...++.++||||+++++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------~~~~~~~~~~~~~~~~h~~iv~~~~ 73 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE------------QKRLLMDLDISMRTVDCPFTVTFYG 73 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHH------------HHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHH------------HHHHHHHHHHHHHhCCCCeEEEEee
Confidence 367899999999999999999874 689999999965432221 1344555666688889999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHER--RDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++.+++..|+||||++ |+|.+++... ....+++..+..++.|++.||+|||++. ||+||||||+||+++.++.+|
T Consensus 74 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~k 150 (290)
T 3fme_A 74 ALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVK 150 (290)
T ss_dssp EEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEE
T ss_pred eeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEE
Confidence 9999999999999996 5888877542 3345899999999999999999999852 899999999999999999999
Q ss_pred EeeccCccccccCCccccccccCCcccccCCccc----ccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYG----YMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
|+|||.++....... .....||+.|+|||++ .+..++.++||||+|+++|||++|+.||.............+
T Consensus 151 l~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 227 (290)
T 3fme_A 151 MCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227 (290)
T ss_dssp BCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH
T ss_pred EeecCCccccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh
Confidence 999999987644322 2345799999999985 566789999999999999999999999975332222111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
... ....+.... ...+.+++.+||++||++|||+.|++++
T Consensus 228 ~~~----------~~~~~~~~~--~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 228 EEP----------SPQLPADKF--SAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HSC----------CCCCCTTTS--CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccC----------CCCcccccC--CHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 110 011111111 1123557888999999999999999984
No 254
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=339.24 Aligned_cols=253 Identities=23% Similarity=0.328 Sum_probs=193.0
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRF 761 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l 761 (1035)
..++|...+.||+|+||.||+|++. +++.||||++..... ..+.+.+|+.+++++ +||||+++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---------------~~~~~~~e~~~l~~l~~h~~i~~~ 86 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---------------EEEEIKQEINMLKKYSHHRNIATY 86 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---------------TTHHHHHHHHHHHHHCCSTTBCCE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---------------cHHHHHHHHHHHHhccCCCCeeee
Confidence 3567899999999999999999875 689999999854321 235789999999999 79999999
Q ss_pred EeEEEc------CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc
Q 039419 762 LGCCWN------RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG 835 (1035)
Q Consensus 762 ~~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~ 835 (1035)
++++.. .+..|+||||+++|+|.+++.......+++..+..++.||+.||+|||+. ||+||||||+||+++
T Consensus 87 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~ 163 (326)
T 2x7f_A 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLT 163 (326)
T ss_dssp EEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEC
T ss_pred eeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEc
Confidence 999987 45789999999999999999876545689999999999999999999999 999999999999999
Q ss_pred CCCceEEeeccCccccccCCccccccccCCcccccCCcccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCc
Q 039419 836 PEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY-----MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEG 910 (1035)
Q Consensus 836 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~ 910 (1035)
.++.+||+|||++....... .......||+.|+|||++. +..++.++||||||+++|+|++|+.||......
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~- 240 (326)
T 2x7f_A 164 ENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM- 240 (326)
T ss_dssp TTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-
T ss_pred CCCCEEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-
Confidence 99999999999998654322 1223457999999999876 567889999999999999999999999654221
Q ss_pred hhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 911 LHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.....+.... .........+ ..+..++.+||+.||++||++.+++++
T Consensus 241 -~~~~~~~~~~-----~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 241 -RALFLIPRNP-----APRLKSKKWS------KKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp -HHHHHHHHSC-----CCCCSCSCSC------HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -HHHHHhhcCc-----cccCCccccC------HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111111100 0000011111 123457788999999999999999884
No 255
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.6e-36 Score=328.58 Aligned_cols=256 Identities=23% Similarity=0.283 Sum_probs=201.9
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
....++|.+.+.||+|+||.||+|+.. +++.||||++....... ...+.+.+|+.++++++||||++
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~i~~ 85 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN------------KDTSTILREVELLKKLDHPNIMK 85 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS------------SCHHHHHHHHHHHHTCCCTTBCC
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch------------HHHHHHHHHHHHHHhccCCCccE
Confidence 455689999999999999999999876 68999999986432211 23568999999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC---
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE--- 837 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~--- 837 (1035)
+++++.+.+..|+||||+++++|.+++..... +++..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 86 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~ 160 (287)
T 2wei_A 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKD 160 (287)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTT
T ss_pred EEEEEeCCCeEEEEEEccCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCc
Confidence 99999999999999999999999999876654 89999999999999999999999 99999999999999754
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+.+||+|||.+....... ......||+.|+|||+..+ .++.++||||||+++|+|++|+.||..... ......+
T Consensus 161 ~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~ 234 (287)
T 2wei_A 161 CDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRV 234 (287)
T ss_dssp CCEEECSTTGGGTBCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH
T ss_pred ccEEEeccCcceeecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence 469999999998664432 1224468999999998765 488999999999999999999999975421 1122211
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...... .........+ ....+++.+||++||++||++.|++++
T Consensus 235 ~~~~~~---~~~~~~~~~~------~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 235 ETGKYA---FDLPQWRTIS------DDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHCCCC---CCSGGGTTSC------HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HcCCCC---CCchhhhhcC------HHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 111000 0000001111 234557888999999999999999984
No 256
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=356.36 Aligned_cols=347 Identities=19% Similarity=0.181 Sum_probs=259.9
Q ss_pred EEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhccccc
Q 039419 179 VVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNN 258 (1035)
Q Consensus 179 ~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 258 (1035)
.++.++++++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3444444444 3444432 466777777777776666677777777777777777776667777777777777777777
Q ss_pred ccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhc
Q 039419 259 FDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQ 338 (1035)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~ 338 (1035)
+.+..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++.+..+..|.++++|++|+|++|+++.+
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---- 167 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI---- 167 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC----
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc----
Confidence 7755555677777777777777777777777777777778888877777777777777777788888877776532
Q ss_pred cccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccc
Q 039419 339 NKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQ 418 (1035)
Q Consensus 339 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~ 418 (1035)
.+..|..+++|+.|+|++|.+++..+..|..+++|++|++++|.+.+.+|..+.. ..+|+
T Consensus 168 ------~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~--------------~~~L~ 227 (477)
T 2id5_A 168 ------PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY--------------GLNLT 227 (477)
T ss_dssp ------CHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTT--------------TCCCS
T ss_pred ------ChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCccccc--------------Ccccc
Confidence 2345777888888888888888777777888888888888888776555544322 23688
Q ss_pred eeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCc
Q 039419 419 MLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNK 498 (1035)
Q Consensus 419 ~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 498 (1035)
+|+|++|++++..+..|..+++|+.|+|++|+++++.+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+
T Consensus 228 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 307 (477)
T 2id5_A 228 SLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ 307 (477)
T ss_dssp EEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSC
T ss_pred EEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCc
Confidence 99999999997666788999999999999999998888889999999999999999998889999999999999999998
Q ss_pred CcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcccCCC
Q 039419 499 LSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGYLPD 577 (1035)
Q Consensus 499 l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~ 577 (1035)
|++ ..+..|..+++|++|+|++|++.++....+-...+..+++.++...+.-|.
T Consensus 308 l~~-------------------------~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 308 LTT-------------------------LEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CSC-------------------------CCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred Cce-------------------------eCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 872 233456678899999999999988765444444455566777777665554
No 257
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.3e-36 Score=331.51 Aligned_cols=263 Identities=21% Similarity=0.272 Sum_probs=202.9
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCceee
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKNIVR 760 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~ 760 (1035)
...++|...+.||+|+||.||+|.+. +++.||||++.......... .......+.+.+|+.+++++. ||||++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-----~~~~~~~~~~~~e~~~l~~l~~h~~i~~ 88 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA-----EEVQELREATLKEVDILRKVSGHPNIIQ 88 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCH-----HHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCH-----HHHHHHHHHHHHHHHHHHHhcCCCCEee
Confidence 34578999999999999999999876 58999999996543211000 000123567899999999996 999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++.+.+..++||||+++++|.+++..... +++..+..++.||+.||+|||+. ||+||||||+||+++.++.+
T Consensus 89 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 163 (298)
T 1phk_A 89 LKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNI 163 (298)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred eeeeeccCCeEEEEEeccCCCcHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcE
Confidence 99999999999999999999999999987643 89999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccc------cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY------MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIV 914 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~ 914 (1035)
||+|||.+....... ......|++.|+|||+.. ...++.++||||||+++|||++|+.||..... ....
T Consensus 164 kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~ 238 (298)
T 1phk_A 164 KLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLML 238 (298)
T ss_dssp EECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH
T ss_pred EEecccchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HHHH
Confidence 999999998765432 223567999999999864 45688999999999999999999999965321 1111
Q ss_pred HHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 915 DWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..+.... .....+........+.+++.+||+.||++||++.|++++
T Consensus 239 ~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 239 RMIMSGN---------YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHHHTC---------CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHhcCC---------cccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1111110 000000000111234457888999999999999999873
No 258
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.9e-36 Score=338.42 Aligned_cols=258 Identities=18% Similarity=0.229 Sum_probs=200.3
Q ss_pred hccccCCeeeeeCCcEEEEEEE-C-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCc------
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEM-E-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKN------ 757 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn------ 757 (1035)
++|.+.+.||+|+||+||+|.+ . +++.||||++.... ...+.+.+|+.+++.++|++
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~e~~~l~~l~~~~~~~~~~ 78 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD---------------RYCEAARSEIQVLEHLNTTDPNSTFR 78 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH---------------HHHHHHHHHHHHHHHHHHHCTTCTTC
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC---------------chhHHHHHHHHHHHHhhhcCCCCcee
Confidence 5799999999999999999976 3 58899999985421 12467889999999987654
Q ss_pred eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC-
Q 039419 758 IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP- 836 (1035)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~- 836 (1035)
++++++++.+.+..++||||+ +++|.+++.......+++..+..++.||++||+|||+. +|+||||||+||+++.
T Consensus 79 i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 154 (339)
T 1z57_A 79 CVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQS 154 (339)
T ss_dssp BCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCC
T ss_pred eEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecc
Confidence 999999999999999999999 89999999887666689999999999999999999999 9999999999999987
Q ss_pred ------------------CCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh
Q 039419 837 ------------------EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT 898 (1035)
Q Consensus 837 ------------------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt 898 (1035)
++.+||+|||.++..... .....||+.|+|||+..+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 229 (339)
T 1z57_A 155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229 (339)
T ss_dssp CEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH
T ss_pred ccccccCCccccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh
Confidence 668999999999864332 235679999999999999899999999999999999999
Q ss_pred CCCCCCCCCCCchhHHHHHHHhccc--hhhhc-----------------------------ccccCCCcccHHHHHHHHH
Q 039419 899 GKQPIDPTIPEGLHIVDWVRQKRGA--IEVLD-----------------------------KSLRARPEVEIEEMLQTLG 947 (1035)
Q Consensus 899 g~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------------------~~~~~~~~~~~~~~~~~l~ 947 (1035)
|+.||...... .....+...... ..... ................+.+
T Consensus 230 g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (339)
T 1z57_A 230 GFTVFPTHDSK--EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFD 307 (339)
T ss_dssp SSCSCCCSCHH--HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHH
T ss_pred CCCCCCCCChH--HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHH
Confidence 99999754321 111111110000 00000 0000000001122344567
Q ss_pred HHHhccCCCCCCCCCHHHHHHH
Q 039419 948 VALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 948 l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
++.+||+.||++|||++|++++
T Consensus 308 li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 308 LIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHhCcCcccccCHHHHhcC
Confidence 8999999999999999999874
No 259
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3e-36 Score=366.14 Aligned_cols=260 Identities=23% Similarity=0.345 Sum_probs=202.6
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC----CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceee
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN----GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVR 760 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 760 (1035)
.++|...+.||+|+||.||+|.+.. +..||||++...... ...+.|.+|+.++++++||||++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~HpnIv~ 455 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-------------SVREKFLQEALTMRQFDHPHIVK 455 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCH-------------HHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCH-------------HHHHHHHHHHHHHHhCCCCCCCe
Confidence 3678899999999999999997743 567999998643221 23568999999999999999999
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
+++++. ++..|+||||+++|+|.++++..+ ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+
T Consensus 456 l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~v 530 (656)
T 2j0j_A 456 LIGVIT-ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 530 (656)
T ss_dssp EEEEEC-SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred EEEEEe-cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCE
Confidence 999984 467899999999999999997653 3489999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHHHHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIVDWVRQ 919 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 919 (1035)
||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+..
T Consensus 531 kL~DFG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~~i~~ 607 (656)
T 2j0j_A 531 KLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIEN 607 (656)
T ss_dssp EECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHH
T ss_pred EEEecCCCeecCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHc
Confidence 9999999987644332 22234567889999999988899999999999999999997 9999975422 122222221
Q ss_pred hccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 920 KRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
... .......+ ..+..++.+||+.||++||++.++++.|+.+..+.
T Consensus 608 ~~~------~~~~~~~~------~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 608 GER------LPMPPNCP------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp TCC------CCCCTTCC------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCC------CCCCcccc------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 110 00111111 23345788899999999999999999999986543
No 260
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.9e-36 Score=347.55 Aligned_cols=261 Identities=22% Similarity=0.232 Sum_probs=200.1
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC--------CC
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR--------HK 756 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------hp 756 (1035)
++|.+.+.||+|+||+||+|.+. +++.||||++.... ...+.+.+|+.++++++ ||
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~E~~~l~~l~~~~~~~~~~~ 101 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE---------------HYTETALDEIRLLKSVRNSDPNDPNRE 101 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---------------HHHHHHHHHHHHHHHHHHSCTTCGGGG
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC---------------cchHHHHHHHHHHHHHhhcCCCCCCcc
Confidence 67999999999999999999765 58899999996421 12467889999999985 78
Q ss_pred ceeeEEeEEE----cCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccE
Q 039419 757 NIVRFLGCCW----NRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNI 832 (1035)
Q Consensus 757 niv~l~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NI 832 (1035)
||+++++++. +....|+||||+ ++++.+++.......+++..+..++.||+.||+|||+++ ||+||||||+||
T Consensus 102 ~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NI 178 (397)
T 1wak_A 102 MVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENI 178 (397)
T ss_dssp GBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGE
T ss_pred eeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHe
Confidence 8999999997 556789999999 677777776655456999999999999999999999963 799999999999
Q ss_pred EEcCCC-------------------------------------------------ceEEeeccCccccccCCcccccccc
Q 039419 833 LIGPEF-------------------------------------------------EPYIADFGLAKLVVEGDFARSSNTV 863 (1035)
Q Consensus 833 ll~~~~-------------------------------------------------~~kl~DFG~a~~~~~~~~~~~~~~~ 863 (1035)
|++.++ .+||+|||.++..... ....
T Consensus 179 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~ 253 (397)
T 1wak_A 179 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTED 253 (397)
T ss_dssp EECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSC
T ss_pred eEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccC
Confidence 999775 7999999999865432 2345
Q ss_pred CCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch----hHHHHHHHhccc--h----------hhh
Q 039419 864 AGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL----HIVDWVRQKRGA--I----------EVL 927 (1035)
Q Consensus 864 ~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~----~~~~~~~~~~~~--~----------~~~ 927 (1035)
.||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+....+. . ...
T Consensus 254 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 333 (397)
T 1wak_A 254 IQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF 333 (397)
T ss_dssp CSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTB
T ss_pred CCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccccc
Confidence 799999999999998999999999999999999999999986543221 111111110000 0 000
Q ss_pred cc-----------------cccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 928 DK-----------------SLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 928 ~~-----------------~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. .+.............+.+++.+||+.||++|||++|++++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 334 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00 0000011122334456679999999999999999999874
No 261
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=9.1e-36 Score=342.17 Aligned_cols=337 Identities=22% Similarity=0.233 Sum_probs=234.4
Q ss_pred ccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEE
Q 039419 197 KLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTI 276 (1035)
Q Consensus 197 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 276 (1035)
.+++++.|++++|.++...+..+..+++|+.|+|++|.+++..+..|..+++|++|++++|.+.+..|..|.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35667777777777663333345667777777777777776556667777777777777777776666667777777777
Q ss_pred EccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCc
Q 039419 277 DLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLE 356 (1035)
Q Consensus 277 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~ 356 (1035)
+|++|+++...+..|.++++|++|++++|++.+..+..|.++++|++|++++|+++.+ .+..+++|+
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------~~~~l~~L~ 189 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-------------DLSLIPSLF 189 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-------------CGGGCTTCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc-------------ccccccccc
Confidence 7777777755445567777777777777777766666677777777777777766532 245566777
Q ss_pred EEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCccccc
Q 039419 357 AVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLA 436 (1035)
Q Consensus 357 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 436 (1035)
.|++++|.+++. ...++|++|++++|.++..... ..++|+.|+|++|++++. ..+.
T Consensus 190 ~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~-----------------~~~~L~~L~l~~n~l~~~--~~l~ 245 (390)
T 3o6n_A 190 HANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGP-----------------VNVELTILKLQHNNLTDT--AWLL 245 (390)
T ss_dssp EEECCSSCCSEE-----ECCSSCSEEECCSSCCCEEECC-----------------CCSSCCEEECCSSCCCCC--GGGG
T ss_pred eeeccccccccc-----CCCCcceEEECCCCeeeecccc-----------------ccccccEEECCCCCCccc--HHHc
Confidence 777777777632 2335677777777777644221 124577777777777743 4677
Q ss_pred CCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcce
Q 039419 437 SLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDIS 516 (1035)
Q Consensus 437 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~ 516 (1035)
.+++|++|+|++|++++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~------------- 310 (390)
T 3o6n_A 246 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HV------------- 310 (390)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CC-------------
T ss_pred CCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ec-------------
Confidence 77777777777777777777777777777777777777763 4555666777777777777776 33
Q ss_pred eeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcccCCChhhhhccccccccccccCC
Q 039419 517 LNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGYLPDSKLFRQLSATEMAGNQGLC 596 (1035)
Q Consensus 517 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c 596 (1035)
|..+..+++|++|+|++|+++..+ +..+++|+.|++++|+|++... ...+..+....+.+++..|
T Consensus 311 ------------~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~c 375 (390)
T 3o6n_A 311 ------------ERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHC 375 (390)
T ss_dssp ------------GGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCSCC
T ss_pred ------------CccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccchhH-HHHHHHHHhhcccccCcee
Confidence 334455678888888888887764 6778899999999999987532 2456777778888999999
Q ss_pred CCCC
Q 039419 597 SRGH 600 (1035)
Q Consensus 597 ~~~~ 600 (1035)
..+.
T Consensus 376 ~~~~ 379 (390)
T 3o6n_A 376 KIDY 379 (390)
T ss_dssp CTTC
T ss_pred cccc
Confidence 8654
No 262
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.6e-36 Score=341.76 Aligned_cols=253 Identities=20% Similarity=0.336 Sum_probs=194.7
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHH-HhcCCCCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKT-LGSIRHKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpniv~l~~ 763 (1035)
++|...+.||+|+||+||+|.+. +|+.||||++....... ...++..|..+ ++.++||||+++++
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~e~~~~~~~~~h~~iv~~~~ 117 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-------------EQKRLLMDLDISMRTVDCPFTVTFYG 117 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH-------------HHHHHHHHHHHHHTTCCCTTTCCEEE
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH-------------HHHHHHHHHHHHHhhcCCCcEEEEee
Confidence 57888899999999999999874 68999999996543221 13455566665 77889999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhc--CCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceE
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHER--RDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPY 841 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~k 841 (1035)
++.+++..|+||||+++ +|.+++... ....+++..+..++.||++||+|||++. ||+||||||+||+++.++.+|
T Consensus 118 ~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~k 194 (340)
T 3an0_A 118 ALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVK 194 (340)
T ss_dssp EEECSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEE
T ss_pred EEEeCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEE
Confidence 99999999999999975 999988642 3345899999999999999999999742 899999999999999999999
Q ss_pred EeeccCccccccCCccccccccCCcccccCCcccc----cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 842 IADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY----MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 842 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
|+|||+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.........+...+
T Consensus 195 l~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 271 (340)
T 3an0_A 195 MCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 271 (340)
T ss_dssp ECCCSHHHHHSCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH
T ss_pred EeeCCCceeccccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHh
Confidence 99999998764321 122357999999999854 44788999999999999999999999975422211111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. .....+...+ ...+.+++.+||+.||++||++.|++++
T Consensus 272 ~~----------~~~~~~~~~~--~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 272 EE----------PSPQLPADKF--SAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HS----------CCCCCCGGGS--CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cC----------CCCCCCcccC--CHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11 0001111111 1234567888999999999999999884
No 263
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.3e-36 Score=342.85 Aligned_cols=259 Identities=24% Similarity=0.283 Sum_probs=194.1
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||+||+|.+. +|+.||||++....... ...+.+.+|+.++++++||||+++++
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~~~~ 108 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE------------IFAKRAYRELLLLKHMQHENVIGLLD 108 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccch------------hHHHHHHHHHHHHHhcCCCCchhhhh
Confidence 367889999999999999999775 58999999996543221 23567899999999999999999999
Q ss_pred EEEcCCcc------eEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 764 CCWNRNTR------LLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 764 ~~~~~~~~------~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
++...+.. |+||||+. ++|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 109 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~ 180 (371)
T 4exu_A 109 VFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNED 180 (371)
T ss_dssp EECSCSSSTTCCCCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTT
T ss_pred heeccCCcccceeEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCC
Confidence 99877654 99999996 688887743 289999999999999999999999 99999999999999999
Q ss_pred CceEEeeccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHH
Q 039419 838 FEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDW 916 (1035)
Q Consensus 838 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~ 916 (1035)
+.+||+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ......
T Consensus 181 ~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i 254 (371)
T 4exu_A 181 CELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQI 254 (371)
T ss_dssp CCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHH
T ss_pred CCEEEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHH
Confidence 99999999999865332 234678999999998876 77999999999999999999999999754211 111111
Q ss_pred HHHhccc-hhhh-----------cccccCCCcccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 917 VRQKRGA-IEVL-----------DKSLRARPEVEIE-----EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 917 ~~~~~~~-~~~~-----------~~~~~~~~~~~~~-----~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
+...... .+.. .......+..... ....+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 255 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 1110000 0000 0000011111111 11244568888999999999999999874
No 264
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6.5e-36 Score=334.70 Aligned_cols=262 Identities=21% Similarity=0.294 Sum_probs=198.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC--CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC---CCCcee
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME--NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI---RHKNIV 759 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpniv 759 (1035)
.++|...+.||+|+||.||+|++. +++.||+|++........ ....+.+|+.+++.+ +||||+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~------------~~~~~~~e~~~l~~l~~~~h~~i~ 77 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG------------MPLSTIREVAVLRHLETFEHPNVV 77 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS------------CBCTHHHHHHHHHHHHHTCCTTBC
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc------------CCchhhHHHHHHHhhhccCCCCeE
Confidence 367999999999999999999873 588999999864332111 123466788877776 899999
Q ss_pred eEEeEEE-----cCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE
Q 039419 760 RFLGCCW-----NRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI 834 (1035)
Q Consensus 760 ~l~~~~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll 834 (1035)
++++++. .....++||||+. |+|.+++.......+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 78 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili 153 (326)
T 1blx_A 78 RLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILV 153 (326)
T ss_dssp CEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEE
T ss_pred eeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEE
Confidence 9999987 4567899999997 6999999877666689999999999999999999999 99999999999999
Q ss_pred cCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHH
Q 039419 835 GPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIV 914 (1035)
Q Consensus 835 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~ 914 (1035)
+.++.+||+|||.++...... ......||+.|+|||+..+..++.++||||||+++|||++|+.||...... ...
T Consensus 154 ~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~ 228 (326)
T 1blx_A 154 TSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--DQL 228 (326)
T ss_dssp CTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHH
T ss_pred cCCCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH--HHH
Confidence 999999999999998654322 233567999999999998889999999999999999999999999754321 111
Q ss_pred HHHHHhccc--hhhhcc-------cccC-------CCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 915 DWVRQKRGA--IEVLDK-------SLRA-------RPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 915 ~~~~~~~~~--~~~~~~-------~~~~-------~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..+...... ...... .... ....... ....+++.+||+.||++||++.|++++
T Consensus 229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID--ELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC--HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCC--HHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111110000 000000 0000 0000011 123457888999999999999999863
No 265
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.2e-36 Score=343.66 Aligned_cols=276 Identities=19% Similarity=0.219 Sum_probs=195.4
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
....++|...+.||+|+||.||+|.+.+|+.||||++.......... .........+.+.+|+.++++++||||+++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~---~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 94 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTV---NILSDSFLCKRVLREIRLLNHFHHPNILGL 94 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCE---EGGGSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchh---hhhhhhhHHHHHHHHHHHHHhCCCcCccce
Confidence 44558899999999999999999988889999999996543322110 001111234789999999999999999999
Q ss_pred EeEEEcC-----CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC
Q 039419 762 LGCCWNR-----NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP 836 (1035)
Q Consensus 762 ~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~ 836 (1035)
++++... ...|+||||+. |+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 95 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 95 RDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLAD 169 (362)
T ss_dssp SEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred eeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcC
Confidence 9998543 35799999997 68888887543 3489999999999999999999999 9999999999999999
Q ss_pred CCceEEeeccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHH
Q 039419 837 EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVD 915 (1035)
Q Consensus 837 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~ 915 (1035)
++.+||+|||+++...... ......||+.|+|||+..+ ..++.++||||+||++|+|++|+.||....... ....
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~ 245 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNK 245 (362)
T ss_dssp TCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred CCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 9999999999997543322 2235678999999998776 678999999999999999999999997542211 1111
Q ss_pred HHHHhccc-------------hhhhcccccCCCcccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 916 WVRQKRGA-------------IEVLDKSLRARPEVEIE-----EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 916 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~-----~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.+...... ...........+..... ......+++.+||+.||++|||++|++++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 11100000 00011111111111000 01234568889999999999999999874
No 266
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-35 Score=340.17 Aligned_cols=200 Identities=24% Similarity=0.274 Sum_probs=171.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CC-----c
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HK-----N 757 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp-----n 757 (1035)
.++|.+.+.||+|+||+||+|.+. +++.||||++.... ...+.+.+|+.+++.++ |+ +
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~e~~~l~~l~~~~~~~~~~ 117 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---------------AFLNQAQIEVRLLELMNKHDTEMKYY 117 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH---------------HHHHHHHHHHHHHHHHHHCSSGGGGG
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH---------------HHHHHHHHHHHHHHHHHhccccccee
Confidence 578999999999999999999776 58899999996421 12456778898888875 44 5
Q ss_pred eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc--
Q 039419 758 IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG-- 835 (1035)
Q Consensus 758 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~-- 835 (1035)
|+++++++...+..|+||||+. |+|.+++.......+++..+..++.|++.||+|||.. ..||+||||||+|||++
T Consensus 118 iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~ 195 (382)
T 2vx3_A 118 IVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNP 195 (382)
T ss_dssp BCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESST
T ss_pred EEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecC
Confidence 9999999999999999999995 5999999877655689999999999999999999952 12899999999999995
Q ss_pred CCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCC
Q 039419 836 PEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPT 906 (1035)
Q Consensus 836 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~ 906 (1035)
.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 196 ~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 196 KRSAIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TSCCEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCcEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4788999999999876332 23567999999999999989999999999999999999999999754
No 267
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=338.75 Aligned_cols=260 Identities=21% Similarity=0.347 Sum_probs=195.8
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
.++|...+.||+|+||.||+|.+.+ .||+|++........ ..+.+.+|+.++++++||||++++++
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~------------~~~~~~~e~~~l~~l~h~~iv~~~~~ 97 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNED------------QLKAFKREVMAYRQTRHENVVLFMGA 97 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCC------------CCCCCCTTGGGGTTCCCTTBCCCCEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHH------------HHHHHHHHHHHHhcCCCCCEeEEEEE
Confidence 3678999999999999999998864 499999875432221 12356789999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..++||||+++++|.+++...+ ..+++..+..++.||++||+|||+. +|+||||||+||+++ ++.+||+|
T Consensus 98 ~~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~D 172 (319)
T 2y4i_B 98 CMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITD 172 (319)
T ss_dssp EECSSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECC
T ss_pred EecCCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEee
Confidence 999999999999999999999997654 3488999999999999999999999 999999999999998 67999999
Q ss_pred ccCccccccCC---ccccccccCCcccccCCccccc---------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchh
Q 039419 845 FGLAKLVVEGD---FARSSNTVAGSYGYIAPEYGYM---------MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLH 912 (1035)
Q Consensus 845 FG~a~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~ 912 (1035)
||+++...... .........||+.|+|||+..+ ..++.++||||||+++|||++|+.||...... .
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~ 250 (319)
T 2y4i_B 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--A 250 (319)
T ss_dssp CSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--H
T ss_pred cCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--H
Confidence 99987653221 1122234569999999998764 45788999999999999999999999754221 1
Q ss_pred HHHHHHHhccchhhhcccc-cCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 913 IVDWVRQKRGAIEVLDKSL-RARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
....+... ..+.. ....+.. +..++.+||+.||++||++.++++.|+.+....
T Consensus 251 ~~~~~~~~------~~~~~~~~~~~~~------l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 251 IIWQMGTG------MKPNLSQIGMGKE------ISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp HHHHHHTT------CCCCCCCSSCCTT------HHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred HHHHhccC------CCCCCCcCCCCHH------HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111110 00111 1111222 345677899999999999999999998886554
No 268
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=8.8e-36 Score=337.60 Aligned_cols=263 Identities=23% Similarity=0.291 Sum_probs=195.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +|+.||||++...... .....+.+|+.++++++||||+++++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~~~ 76 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP-------------LFALRTLREIKILKHFKHENIITIFN 76 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSH-------------HHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccc-------------hHHHHHHHHHHHHHhCcCCCcCCeee
Confidence 467899999999999999999876 5899999999643211 12457889999999999999999999
Q ss_pred EEEcC-----CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 764 CCWNR-----NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 764 ~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
++... ...|+||||+. |+|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++
T Consensus 77 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~ 149 (353)
T 2b9h_A 77 IQRPDSFENFNEVYIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNC 149 (353)
T ss_dssp ECCCSCSTTCCCEEEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTC
T ss_pred eecccccCccceEEEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCC
Confidence 88754 56799999996 6999998763 389999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCccccccCCccc--------cccccCCcccccCCcccc-cCCCCccccchhHHHHHHHHHhCCCCCCCCCCC
Q 039419 839 EPYIADFGLAKLVVEGDFAR--------SSNTVAGSYGYIAPEYGY-MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPE 909 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~ 909 (1035)
.+||+|||+++......... ......||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 150 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 229 (353)
T 2b9h_A 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229 (353)
T ss_dssp CEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 99999999998765332111 122457899999999865 467899999999999999999999999754211
Q ss_pred chhHHHHHHHhccch---h-----------hhcccccCCCcccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 910 GLHIVDWVRQKRGAI---E-----------VLDKSLRARPEVEIE-----EMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 910 ~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~-----~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.....+....+.. . .........+..... ......+++.+||+.||++|||++|++++
T Consensus 230 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 230 --HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp --HHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred --HHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 1111111000000 0 000000000000000 11234568888999999999999999874
No 269
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.9e-36 Score=336.50 Aligned_cols=254 Identities=22% Similarity=0.264 Sum_probs=170.4
Q ss_pred HHhccccC-CeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 684 VLKCLVED-SVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 684 ~~~~~~~~-~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
+.++|.+. +.||+|+||+||+|.+. +++.||||++.... +........++.++||||+++
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------------------~~~~e~~~~~~~~~h~~i~~~ 87 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------------------KARQEVDHHWQASGGPHIVCI 87 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH------------------HHHHHHHHHHHHTTSTTBCCE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------------------HHHHHHHHHHHhcCCCChHHH
Confidence 45678875 46999999999999876 58999999985321 112222333566799999999
Q ss_pred EeEEEc----CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC-
Q 039419 762 LGCCWN----RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP- 836 (1035)
Q Consensus 762 ~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~- 836 (1035)
++++.. ....++||||++||+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 88 ~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~ 164 (336)
T 3fhr_A 88 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSK 164 (336)
T ss_dssp EEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCS
T ss_pred HHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEec
Confidence 999876 44579999999999999999887666799999999999999999999999 9999999999999976
Q ss_pred --CCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHH
Q 039419 837 --EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIV 914 (1035)
Q Consensus 837 --~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~ 914 (1035)
++.+||+|||+++...... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||..........
T Consensus 165 ~~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~- 239 (336)
T 3fhr_A 165 EKDAVLKLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP- 239 (336)
T ss_dssp STTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred CCCceEEEeccccceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-
Confidence 4559999999998654322 234578999999999988889999999999999999999999997543221100
Q ss_pred HHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 915 DWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.....................+ ..+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 240 GMKRRIRLGQYGFPNPEWSEVS------EDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -----------CCCTTTSTTCC------HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHhhhccccccCchhhccCC------HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000000000000001111 223457888999999999999999985
No 270
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=9.4e-36 Score=329.57 Aligned_cols=254 Identities=25% Similarity=0.386 Sum_probs=188.8
Q ss_pred HHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 684 VLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 684 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
..++|...+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+.++++++||||++++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~E~~~l~~l~h~~i~~~~ 68 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE---------------EKLSTILSEVMLLASLNHQYVVRYY 68 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH---------------HHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH---------------HHHHHHHHHHHHHHhcCchHHHHHH
Confidence 4578999999999999999999875 68999999984311 1246789999999999999999999
Q ss_pred eEEEc-------------CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCc
Q 039419 763 GCCWN-------------RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKA 829 (1035)
Q Consensus 763 ~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp 829 (1035)
+++.+ .+..|+||||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp 144 (303)
T 1zy4_A 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKP 144 (303)
T ss_dssp EEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred HHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCH
Confidence 99865 346799999999999999997643 3478899999999999999999999 999999999
Q ss_pred ccEEEcCCCceEEeeccCccccccCCc------------cccccccCCcccccCCcccccC-CCCccccchhHHHHHHHH
Q 039419 830 NNILIGPEFEPYIADFGLAKLVVEGDF------------ARSSNTVAGSYGYIAPEYGYMM-KITEKSDVYSYGVVVLEV 896 (1035)
Q Consensus 830 ~NIll~~~~~~kl~DFG~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvvl~el 896 (1035)
+||+++.++.+||+|||.++....... ........||+.|+|||+..+. .++.++||||||+++|||
T Consensus 145 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 224 (303)
T 1zy4_A 145 MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224 (303)
T ss_dssp GGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHH
T ss_pred HhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHH
Confidence 999999999999999999986543210 1122345689999999998754 689999999999999999
Q ss_pred HhCCCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 897 LTGKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 897 ltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
++ ||... ..................+.... .....+..++.+||++||++||++.+++++
T Consensus 225 ~~---p~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 225 IY---PFSTG----MERVNILKKLRSVSIEFPPDFDD------NKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HS---CCSSH----HHHHHHHHHHHSTTCCCCTTCCT------TTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred Hh---ccCCc----hhHHHHHHhccccccccCccccc------cchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 98 55421 11111111111110011111111 111223457888999999999999999884
No 271
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.7e-36 Score=332.68 Aligned_cols=261 Identities=21% Similarity=0.272 Sum_probs=188.1
Q ss_pred HhccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+.. ++.||||++..... ...+.+.+|+.++++++||||+++++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~~iv~~~~ 75 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP--------------QSVKHALREIKIIRRLDHDNIVKVFE 75 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSH--------------HHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCCh--------------HHHHHHHHHHHHHHhcCCCCeeEEEE
Confidence 3678899999999999999998775 89999999854321 12467899999999999999999999
Q ss_pred EEE--------------cCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCc
Q 039419 764 CCW--------------NRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKA 829 (1035)
Q Consensus 764 ~~~--------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp 829 (1035)
++. +....|+||||++ |+|.+++... .+++..+..++.|++.||+|||+. ||+||||||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp 148 (320)
T 2i6l_A 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKP 148 (320)
T ss_dssp EECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSG
T ss_pred eccccccccccccccccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCH
Confidence 874 3356799999997 6999998653 388999999999999999999999 999999999
Q ss_pred ccEEEc-CCCceEEeeccCccccccCCc-cccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCC
Q 039419 830 NNILIG-PEFEPYIADFGLAKLVVEGDF-ARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPT 906 (1035)
Q Consensus 830 ~NIll~-~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~ 906 (1035)
+||+++ .++.+||+|||.++....... ........||..|+|||+..+ ..++.++||||||+++|||++|+.||...
T Consensus 149 ~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 228 (320)
T 2i6l_A 149 ANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228 (320)
T ss_dssp GGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence 999997 567999999999987643211 122234567999999998754 67899999999999999999999999754
Q ss_pred CCCchhHHHHHHHhccc-hh------------hhcccccCCCcccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 039419 907 IPEGLHIVDWVRQKRGA-IE------------VLDKSLRARPEVEIE-----EMLQTLGVALLCVNPTPDDRPTMKDVAA 968 (1035)
Q Consensus 907 ~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~-----~~~~~l~l~~~cl~~dP~~RPs~~el~~ 968 (1035)
... .....+...... .. ........ +..... ....+.+++.+||+.||++||+++|+++
T Consensus 229 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 229 HEL--EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTE-PHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SHH--HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTS-CCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CHH--HHHHHHHHhcCCCchhhhhhhhhcCcccccccccC-CCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 321 111111110000 00 00000000 000000 1123456888999999999999999988
Q ss_pred H
Q 039419 969 M 969 (1035)
Q Consensus 969 ~ 969 (1035)
+
T Consensus 306 h 306 (320)
T 2i6l_A 306 H 306 (320)
T ss_dssp S
T ss_pred C
Confidence 5
No 272
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.8e-35 Score=335.28 Aligned_cols=259 Identities=19% Similarity=0.219 Sum_probs=199.3
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CC-cEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCc-----
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NG-EVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKN----- 757 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn----- 757 (1035)
.++|.+.+.||+|+||+||+|.+. ++ +.||+|++.... ...+.+.+|+.++++++|++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~E~~~l~~l~~~~~~~~~ 82 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG---------------KYREAARLEINVLKKIKEKDKENKF 82 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH---------------HHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc---------------cchhHHHHHHHHHHHHhhcCCCCce
Confidence 368999999999999999999775 34 689999985421 12467889999999997765
Q ss_pred -eeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE--
Q 039419 758 -IVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI-- 834 (1035)
Q Consensus 758 -iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll-- 834 (1035)
++.+++++...+..++||||+ ++++.+++.......+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 83 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~ 158 (355)
T 2eu9_A 83 LCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVN 158 (355)
T ss_dssp CBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESC
T ss_pred eEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEec
Confidence 999999999999999999999 77888888776655699999999999999999999999 99999999999999
Q ss_pred -----------------cCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHH
Q 039419 835 -----------------GPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVL 897 (1035)
Q Consensus 835 -----------------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~ell 897 (1035)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 233 (355)
T 2eu9_A 159 SEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 233 (355)
T ss_dssp CCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHH
Confidence 66789999999999864332 23567999999999999889999999999999999999
Q ss_pred hCCCCCCCCCCCchhHHHHHHHhccc--hhhhc----------c-------------------cccCCCcccHHHHHHHH
Q 039419 898 TGKQPIDPTIPEGLHIVDWVRQKRGA--IEVLD----------K-------------------SLRARPEVEIEEMLQTL 946 (1035)
Q Consensus 898 tg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~----------~-------------------~~~~~~~~~~~~~~~~l 946 (1035)
+|+.||...... .....+...... ..... . ...............+.
T Consensus 234 ~g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 311 (355)
T 2eu9_A 234 RGFTLFQTHENR--EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLF 311 (355)
T ss_dssp HSSCSCCCSSHH--HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHH
T ss_pred hCCCCCCCCCHH--HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHH
Confidence 999999754321 111111111000 00000 0 00000000112233556
Q ss_pred HHHHhccCCCCCCCCCHHHHHHH
Q 039419 947 GVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 947 ~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
+++.+||+.||++|||+.|++++
T Consensus 312 ~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 312 DLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHhcCChhhCcCHHHHhcC
Confidence 78999999999999999999874
No 273
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-36 Score=331.91 Aligned_cols=251 Identities=19% Similarity=0.276 Sum_probs=189.5
Q ss_pred HHHHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC----CC
Q 039419 681 VEQVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI----RH 755 (1035)
Q Consensus 681 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~h 755 (1035)
.+...++|...+.||+|+||.||+|.+. +++.||||++........... .....+.+|+.+++++ +|
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~--------~~~~~~~~e~~~l~~l~~~~~h 97 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPL--------SDSVTCPLEVALLWKVGAGGGH 97 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC----------------CCCCHHHHHHHHHHSSCCC
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccc--------hhhHHHHHHHHHHHhhcccCCC
Confidence 4555688999999999999999999775 588999999976543221110 0123456789999888 89
Q ss_pred CceeeEEeEEEcCCcceEEEEe-CCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE
Q 039419 756 KNIVRFLGCCWNRNTRLLMYDY-MPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI 834 (1035)
Q Consensus 756 pniv~l~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll 834 (1035)
|||+++++++.+.+..++|||| +.+++|.+++..... +++..+..++.||++||+|||+. +|+||||||+||++
T Consensus 98 ~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~--~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 172 (312)
T 2iwi_A 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP--LGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILI 172 (312)
T ss_dssp SSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEE
T ss_pred CCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEE
Confidence 9999999999999999999999 789999999987654 89999999999999999999999 99999999999999
Q ss_pred c-CCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCC-ccccchhHHHHHHHHHhCCCCCCCCCCCchh
Q 039419 835 G-PEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKIT-EKSDVYSYGVVVLEVLTGKQPIDPTIPEGLH 912 (1035)
Q Consensus 835 ~-~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~ 912 (1035)
+ .++.+||+|||+++...... .....||..|+|||+..+..+. .++||||||+++|||++|+.||...
T Consensus 173 ~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------ 242 (312)
T 2iwi_A 173 DLRRGCAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------ 242 (312)
T ss_dssp ETTTTEEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------
T ss_pred eCCCCeEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh------
Confidence 9 88999999999998765432 2356799999999988766664 5899999999999999999999632
Q ss_pred HHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 913 IVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...... ........+ .....++.+||+.||++||+++|++++
T Consensus 243 -~~~~~~--------~~~~~~~~~------~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 243 -QEILEA--------ELHFPAHVS------PDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -HHHHHT--------CCCCCTTSC------HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -HHHhhh--------ccCCcccCC------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011110 001111111 123457888999999999999999874
No 274
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.1e-35 Score=356.39 Aligned_cols=336 Identities=22% Similarity=0.237 Sum_probs=227.5
Q ss_pred cccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEE
Q 039419 198 LSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTID 277 (1035)
Q Consensus 198 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 277 (1035)
+++++.|++++|.+....+..+.++++|+.|+|++|.+++..|..|+.+++|+.|+|++|.+.+..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45566666666666543334455666666666666666655555666666666666666666666666666666677777
Q ss_pred ccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcE
Q 039419 278 LSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEA 357 (1035)
Q Consensus 278 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~ 357 (1035)
|++|.|++..+..|+++++|++|+|++|.+.+..|..|.++++|++|+|++|+|+.+ .+..+++|+.
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-------------~~~~l~~L~~ 196 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-------------DLSLIPSLFH 196 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-------------CGGGCTTCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-------------Chhhhhhhhh
Confidence 777766655555566666777777777766666666666666666666666666522 2445566777
Q ss_pred EeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccC
Q 039419 358 VDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLAS 437 (1035)
Q Consensus 358 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 437 (1035)
|++++|.+++ +....+|+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..
T Consensus 197 L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~-----------------~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 197 ANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV-----------------NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp EECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC-----------------CSCCCEEECCSSCCCC--CGGGGG
T ss_pred hhcccCcccc-----ccCCchhheeeccCCccccccccc-----------------CCCCCEEECCCCCCCC--Chhhcc
Confidence 7777776653 223456777777777766432211 1457777777777775 356777
Q ss_pred CCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCccee
Q 039419 438 LTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISL 517 (1035)
Q Consensus 438 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L 517 (1035)
+++|+.|+|++|.+.+.+|..|..+++|+.|+|++|.+++ +|..+..+++|++|+|++|.++ .+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i-------------- 316 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HV-------------- 316 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CC--------------
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-cc--------------
Confidence 7777777777777777777777777777777777777774 4556666777777777777776 33
Q ss_pred eccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcccCCChhhhhccccccccccccCCC
Q 039419 518 NLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGYLPDSKLFRQLSATEMAGNQGLCS 597 (1035)
Q Consensus 518 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~ 597 (1035)
|..+..+++|++|+|++|++.+.+ +..+++|+.|+|++|+|++... ...+..+....+.+|...|+
T Consensus 317 -----------~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~C~ 382 (597)
T 3oja_B 317 -----------ERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCK 382 (597)
T ss_dssp -----------GGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCCCCC
T ss_pred -----------CcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCChhH-HHHHHHHhhhccccccccCC
Confidence 444556678888889888887764 6678899999999999987643 34577778888899999998
Q ss_pred CCC
Q 039419 598 RGH 600 (1035)
Q Consensus 598 ~~~ 600 (1035)
.+.
T Consensus 383 ~~~ 385 (597)
T 3oja_B 383 IDY 385 (597)
T ss_dssp TTC
T ss_pred cch
Confidence 753
No 275
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.7e-36 Score=345.71 Aligned_cols=253 Identities=25% Similarity=0.335 Sum_probs=184.9
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~ 764 (1035)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +|||||+++++
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----------------~~~~~~~E~~~l~~l~~HpnIv~~~~~ 77 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----------------FCDIALMEIKLLTESDDHPNVIRYYCS 77 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----------------GHHHHHHHHHHHHHHTTSTTBCCEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----------------HHHHHHHHHHHHHhccCCCCcCeEEEE
Confidence 345567899999999998887778999999998532 134678999999986 89999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCC-----CCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC--
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSC-----LEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE-- 837 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~-- 837 (1035)
+.+++..|+||||+. |+|.+++....... .++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 78 ~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ 153 (434)
T 2rio_A 78 ETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSR 153 (434)
T ss_dssp EECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHH
T ss_pred EecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcc
Confidence 999999999999995 69999997654311 12234567999999999999999 99999999999999754
Q ss_pred -----------CceEEeeccCccccccCCcc--ccccccCCcccccCCccccc-------CCCCccccchhHHHHHHHHH
Q 039419 838 -----------FEPYIADFGLAKLVVEGDFA--RSSNTVAGSYGYIAPEYGYM-------MKITEKSDVYSYGVVVLEVL 897 (1035)
Q Consensus 838 -----------~~~kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlGvvl~ell 897 (1035)
+.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ell 233 (434)
T 2rio_A 154 FTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233 (434)
T ss_dssp HHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHH
T ss_pred cccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHH
Confidence 48999999999876543221 11234679999999998765 67899999999999999999
Q ss_pred h-CCCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 898 T-GKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 898 t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
+ |+.||....... ...+...... ...... ........+.+++.+||+.||++||++.+++++
T Consensus 234 t~g~~Pf~~~~~~~---~~i~~~~~~~-----~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 234 SKGKHPFGDKYSRE---SNIIRGIFSL-----DEMKCL--HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp TTSCCTTCSTTTHH---HHHHHTCCCC-----CCCTTC--CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hCCCCCCCCchhhH---HHHhcCCCCc-----cccccc--ccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 9 999997543211 1111111000 000000 111223345678899999999999999999873
No 276
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.3e-36 Score=333.42 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=197.0
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC--CCceeeE
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR--HKNIVRF 761 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l 761 (1035)
.++|...+.||+|+||.||+|.+. +++.||||++........... ...+.+.+|+.++++++ ||||+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~--------~~~~~~~~E~~~l~~l~~~~~~i~~~ 113 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGEL--------PNGTRVPMEVVLLKKVSSGFSGVIRL 113 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEEC--------TTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhh--------hhhhHHHHHHHHHHhhccCCCCceEE
Confidence 467999999999999999999765 589999999976433221110 01234668999999996 5999999
Q ss_pred EeEEEcCCcceEEEEeCCC-CChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc-CCCc
Q 039419 762 LGCCWNRNTRLLMYDYMPN-GSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG-PEFE 839 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~-~~~~ 839 (1035)
++++.+++..++||||+.+ ++|.+++..... +++..+..++.||++||+|||+. +|+||||||+||+++ .++.
T Consensus 114 ~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~--l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 114 LDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp EEEEECSSEEEEEEECCSSEEEHHHHHHHHCS--CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTE
T ss_pred EEEEecCCcEEEEEEcCCCCccHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCC
Confidence 9999999999999999976 899999987644 89999999999999999999999 999999999999999 7899
Q ss_pred eEEeeccCccccccCCccccccccCCcccccCCcccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 840 PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKI-TEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
+||+|||+++...... .....||+.|+|||+..+..+ +.++||||||+++|||++|+.||.... ....
T Consensus 189 ~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~ 257 (320)
T 3a99_A 189 LKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIR 257 (320)
T ss_dssp EEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH
T ss_pred EEEeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhc
Confidence 9999999998765432 234679999999999876665 678999999999999999999996320 1111
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.. .......+. .+..++.+||+.||++||+++|++++
T Consensus 258 ~~--------~~~~~~~~~------~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 GQ--------VFFRQRVSS------ECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp CC--------CCCSSCCCH------HHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc--------ccccccCCH------HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 011111221 23457888999999999999999874
No 277
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=332.62 Aligned_cols=258 Identities=24% Similarity=0.289 Sum_probs=192.1
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|...+.||+|+||.||+|.+. +|+.||||++....... ...+.+.+|+.++++++||||++++++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~iv~~~~~ 91 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE------------IFAKRAYRELLLLKHMQHENVIGLLDV 91 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSH------------HHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccch------------HHHHHHHHHHHHHHhcCCCCcccHhhe
Confidence 57888999999999999999775 58999999996533211 135678999999999999999999999
Q ss_pred EEcCCc------ceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 765 CWNRNT------RLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 765 ~~~~~~------~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
+...+. .|+||||+. ++|.+++.. .+++..+..++.||+.||+|||+. ||+||||||+||+++.++
T Consensus 92 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~ 163 (353)
T 3coi_A 92 FTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDC 163 (353)
T ss_dssp ECSCSSGGGCCCCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTC
T ss_pred EecccccccceeEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCC
Confidence 987654 499999996 688888743 289999999999999999999999 999999999999999999
Q ss_pred ceEEeeccCccccccCCccccccccCCcccccCCccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYM-MKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
.+||+|||+++..... .....||+.|+|||+..+ ..++.++||||||+++|||++|+.||....... ......
T Consensus 164 ~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~ 237 (353)
T 3coi_A 164 ELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQIL 237 (353)
T ss_dssp CEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHH
T ss_pred cEEEeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 9999999999864332 234578999999998776 678999999999999999999999997543211 111111
Q ss_pred HHhcc-chhhhc-----------ccccCCCc-----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRG-AIEVLD-----------KSLRARPE-----VEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~-~~~~~~-----------~~~~~~~~-----~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..... ..+... ......+. ........+.+++.+||+.||++||+++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 238 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 10000 000000 00000000 000112234567888999999999999999874
No 278
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=342.96 Aligned_cols=250 Identities=25% Similarity=0.356 Sum_probs=184.5
Q ss_pred hccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~ 764 (1035)
.+|...+.||+|+||+||.....+++.||||++..... +.+.+|+.+++++ +|||||+++++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----------------~~~~~E~~~l~~l~~HpnIv~l~~~ 86 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----------------SFADREVQLLRESDEHPNVIRYFCT 86 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----------------EECHHHHHHHHHSCCCTTBCCEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----------------HHHHHHHHHHHhccCCCCcCeEEEE
Confidence 35888899999999997766667799999999965321 1245899999999 79999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcC-----CCc
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGP-----EFE 839 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~-----~~~ 839 (1035)
+.+.+..|+||||+. |+|.+++...... .....+..++.||++||+|||+. +|+||||||+||+++. ...
T Consensus 87 ~~~~~~~~lv~E~~~-g~L~~~l~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~ 161 (432)
T 3p23_A 87 EKDRQFQYIAIELCA-ATLQEYVEQKDFA-HLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIK 161 (432)
T ss_dssp EEETTEEEEEEECCS-EEHHHHHHSSSCC-CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCC
T ss_pred EecCCEEEEEEECCC-CCHHHHHHhcCCC-ccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCcee
Confidence 999999999999995 6999999765432 44455678999999999999999 9999999999999953 235
Q ss_pred eEEeeccCccccccCCc-cccccccCCcccccCCcccc---cCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCchhHH
Q 039419 840 PYIADFGLAKLVVEGDF-ARSSNTVAGSYGYIAPEYGY---MMKITEKSDVYSYGVVVLEVLT-GKQPIDPTIPEGLHIV 914 (1035)
Q Consensus 840 ~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvvl~ellt-g~~P~~~~~~~~~~~~ 914 (1035)
+||+|||+|+....... ........||+.|+|||++. ...++.++|||||||++|||++ |..||....... .
T Consensus 162 ~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~ 238 (432)
T 3p23_A 162 AMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---A 238 (432)
T ss_dssp EEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---H
T ss_pred EEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---H
Confidence 78999999987654321 12234567999999999987 4567889999999999999999 999996432211 1
Q ss_pred HHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 915 DWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
..... .. ... .............+++.+||+.||++||+++|++++
T Consensus 239 ~~~~~-~~-------~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 239 NILLG-AC-------SLD-CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHTT-CC-------CCT-TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhc-cC-------Ccc-ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 11000 00 000 001111222334568889999999999999999963
No 279
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.5e-35 Score=338.35 Aligned_cols=261 Identities=19% Similarity=0.239 Sum_probs=196.8
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC----------
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR---------- 754 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---------- 754 (1035)
++|...+.||+|+||+||+|++. +++.||||++.... ...+.+.+|+.++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~e~~~l~~l~~~~~~~~~~~ 83 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---------------VYTEAAEDEIKLLQRVNDADNTKEDSM 83 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---------------HHHHHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc---------------cchhhhhHHHHHHHHhhcccccchhcc
Confidence 57899999999999999999774 68999999986422 12457889999999886
Q ss_pred -CCceeeEEeEEEcCC----cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCc
Q 039419 755 -HKNIVRFLGCCWNRN----TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKA 829 (1035)
Q Consensus 755 -hpniv~l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp 829 (1035)
||||+++++++...+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||+++ ||+||||||
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp 160 (373)
T 1q8y_A 84 GANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKP 160 (373)
T ss_dssp HHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSG
T ss_pred ccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCCh
Confidence 899999999998654 679999999 999999998766666999999999999999999999952 899999999
Q ss_pred ccEEEc------CCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 039419 830 NNILIG------PEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPI 903 (1035)
Q Consensus 830 ~NIll~------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~ 903 (1035)
+||+++ ..+.+||+|||+++..... .....||+.|+|||+..+..++.++|||||||++|||++|+.||
T Consensus 161 ~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 235 (373)
T 1q8y_A 161 ENVLMEIVDSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235 (373)
T ss_dssp GGEEEEEEETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHeEEeccCCCcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 999995 3447999999999865432 23457999999999999989999999999999999999999999
Q ss_pred CCCCCCc-----hhHHHHHHHhccch-----------hhhc-----------------ccccCCCcccHHHHHHHHHHHH
Q 039419 904 DPTIPEG-----LHIVDWVRQKRGAI-----------EVLD-----------------KSLRARPEVEIEEMLQTLGVAL 950 (1035)
Q Consensus 904 ~~~~~~~-----~~~~~~~~~~~~~~-----------~~~~-----------------~~~~~~~~~~~~~~~~~l~l~~ 950 (1035)
....... ......+....... ..+. ................+.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 315 (373)
T 1q8y_A 236 EPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLS 315 (373)
T ss_dssp ---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHG
T ss_pred CCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHH
Confidence 7543211 11111111100000 0000 0000011111233445567899
Q ss_pred hccCCCCCCCCCHHHHHHH
Q 039419 951 LCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 951 ~cl~~dP~~RPs~~el~~~ 969 (1035)
+||+.||++|||++|++++
T Consensus 316 ~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 316 PMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp GGGCSSTTTCBCHHHHHTC
T ss_pred HHhccCccccCCHHHHhhC
Confidence 9999999999999999874
No 280
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.3e-35 Score=321.23 Aligned_cols=236 Identities=12% Similarity=0.079 Sum_probs=181.3
Q ss_pred hccccCCeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeE
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGC 764 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 764 (1035)
++|.+.+.||+|+||.||+|.+.. ++.||||++........ ...+.+.+|+.++++++||||++++++
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~hp~iv~~~~~ 99 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPD-----------DVLQETLSRTLRLSRIDKPGVARVLDV 99 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCH-----------HHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCH-----------HHHHHHHHHHHHHhcCCCCCcceeeEE
Confidence 679999999999999999998764 89999999976543222 234689999999999999999999999
Q ss_pred EEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEee
Q 039419 765 CWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIAD 844 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~D 844 (1035)
+.+.+..|+||||++|++|.++++.. .....+.+++.|++.||+|||+. ||+||||||+||+++.++.+||++
T Consensus 100 ~~~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~ 172 (286)
T 3uqc_A 100 VHTRAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAY 172 (286)
T ss_dssp EEETTEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECS
T ss_pred EEECCcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEe
Confidence 99999999999999999999999542 35567889999999999999999 999999999999999999999985
Q ss_pred ccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccch
Q 039419 845 FGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAI 924 (1035)
Q Consensus 845 FG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 924 (1035)
+| |++ .++.++|||||||++|||++|+.||........... ........
T Consensus 173 ~~----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-~~~~~~~~- 221 (286)
T 3uqc_A 173 PA----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-AERDTAGQ- 221 (286)
T ss_dssp CC----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-CCBCTTSC-
T ss_pred cc----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-HHHHhccC-
Confidence 43 333 267899999999999999999999986533210000 00000000
Q ss_pred hhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHhH
Q 039419 925 EVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAMIKEIKQER 977 (1035)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~L~~~~~~~ 977 (1035)
...........+ ..+..++.+||++||++| |+.|+++.|+++....
T Consensus 222 ~~~~~~~~~~~~------~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 222 PIEPADIDRDIP------FQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp BCCHHHHCTTSC------HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred CCChhhcccCCC------HHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 000000011111 123457888999999999 9999999999886543
No 281
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.2e-35 Score=329.06 Aligned_cols=256 Identities=24% Similarity=0.344 Sum_probs=174.8
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHH-HHhcCCCCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIK-TLGSIRHKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~l~~ 763 (1035)
++|...+.||+|+||.||+|.+. +++.||||++....... ...++.+|+. +++.++||||+++++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-------------~~~~~~~e~~~~~~~~~h~niv~~~~ 88 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK-------------EQKQLLMDLDVVMRSSDCPYIVQFYG 88 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHH-------------HHHHHHHHHHHHHSSCCCTTBCCEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCch-------------HHHHHHHHHHHHHHcCCCCcEeeeee
Confidence 67889999999999999999875 68999999996543211 1345556666 677789999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhh---cCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCce
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHE---RRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEP 840 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~ 840 (1035)
++.+.+..|+||||+++ +|.+++.. .....+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+
T Consensus 89 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~ 165 (327)
T 3aln_A 89 ALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNI 165 (327)
T ss_dssp EEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEE
T ss_pred EEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCE
Confidence 99999999999999975 88877753 2234589999999999999999999995 279999999999999999999
Q ss_pred EEeeccCccccccCCccccccccCCcccccCCccc----ccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHH
Q 039419 841 YIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYG----YMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDW 916 (1035)
Q Consensus 841 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~ 916 (1035)
||+|||+++...... ......||+.|+|||+. .+..++.++||||||+++|||++|+.||....... ..
T Consensus 166 kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~ 238 (327)
T 3aln_A 166 KLCDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQ 238 (327)
T ss_dssp EECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------
T ss_pred EEccCCCceeccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HH
Confidence 999999998764432 12234799999999997 46678999999999999999999999997532110 00
Q ss_pred HHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 917 VRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
+.. ........+........ ...+.+++.+||+.||++||++.+++++
T Consensus 239 ~~~---~~~~~~~~~~~~~~~~~--~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 239 LTQ---VVKGDPPQLSNSEEREF--SPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CC---CCCSCCCCCCCCSSCCC--CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHH---HhcCCCCCCCCcccccC--CHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 000 00000001111000011 1234557888999999999999999884
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=329.31 Aligned_cols=254 Identities=21% Similarity=0.301 Sum_probs=178.2
Q ss_pred HhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.++|...+.||+|+||.||+|.+. +++.||||++........ ..+.+..+..+++.++||||+++++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------~~~~~~~~~~~~~~~~h~~i~~~~~ 91 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEE------------NKRILMDLDVVLKSHDCPYIVQCFG 91 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHH------------HHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchH------------HHHHHHHHHHHHHhcCCCceeeEEE
Confidence 467889999999999999999876 689999999965432221 1334555666788889999999999
Q ss_pred EEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhc-cCCCCeeccCCCcccEEEcCCCceEE
Q 039419 764 CCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHH-DCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
++.+.+..|+||||+ ++.+..+.... ...+++..+..++.|+++||+|||+ . ||+||||||+||+++.++.+||
T Consensus 92 ~~~~~~~~~lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl 166 (318)
T 2dyl_A 92 TFITNTDVFIAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKL 166 (318)
T ss_dssp EEECSSEEEEEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEE
T ss_pred EEecCCcEEEEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEE
Confidence 999999999999999 55555555432 3448999999999999999999998 5 8999999999999999999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHH
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY-----MMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWV 917 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~ 917 (1035)
+|||.++...... ......||+.|+|||+.. ...++.++||||||+++|||++|+.||....... .....+
T Consensus 167 ~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~ 242 (318)
T 2dyl_A 167 CDFGISGRLVDDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-EVLTKV 242 (318)
T ss_dssp CCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHHHHH
T ss_pred EECCCchhccCCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-HHHHHH
Confidence 9999997664432 123457999999999974 5568899999999999999999999997532211 111111
Q ss_pred HHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 918 RQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
.... ........ .. ...+..++.+||+.||++||++++++++
T Consensus 243 ~~~~------~~~~~~~~--~~--~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 243 LQEE------PPLLPGHM--GF--SGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHSC------CCCCCSSS--CC--CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred hccC------CCCCCccC--CC--CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1100 00011000 00 1123457788999999999999999884
No 283
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.9e-35 Score=336.05 Aligned_cols=351 Identities=18% Similarity=0.164 Sum_probs=232.7
Q ss_pred ccCCCCCCCCCCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCC-CCCCCCCceeeC
Q 039419 7 ALSNWNPSDSNPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPD-LGDCTQLTTIDV 85 (1035)
Q Consensus 7 ~l~~w~~~~~~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~-~~~l~~L~~L~l 85 (1035)
.+++|.....+||.|.+..|.-.+ +.+............-..+++++.|++++|.++ .+|+. +..+++|++|+|
T Consensus 2 ~~~~~~~~~~C~~~~~~~~c~~~~----~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L 76 (390)
T 3o6n_A 2 NVKPRQPEYKCIDSNLQYDCVFYD----VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNL 76 (390)
T ss_dssp -----CCEECBCC------EEEES----CEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEEC
T ss_pred CcCCCCCccceehhhhhhccceee----eeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEEC
Confidence 578999876444445555553111 112222222222222345688899999999988 45554 678899999999
Q ss_pred CCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchh-hccccccceeecCCCcccC
Q 039419 86 SSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVE-LGKLVNLEVIRAGGNKDIA 164 (1035)
Q Consensus 86 s~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~-l~~l~~L~~L~l~~n~~~~ 164 (1035)
++|.+++..+..++.+++|++|+|++|.+++..|..++.+++|++|+|++|.++ .+|.. ++++++|++|++++|.
T Consensus 77 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~--- 152 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNN--- 152 (390)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC---
T ss_pred CCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCc---
Confidence 999988666778888999999999999988777777888888888888888887 45544 4677777777776664
Q ss_pred CCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhh
Q 039419 165 GKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELG 244 (1035)
Q Consensus 165 ~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~ 244 (1035)
+.+..|..++.+++|++|++++|.+++. .+..+++|+.|++++|.+++ +.
T Consensus 153 ----------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~ 202 (390)
T 3o6n_A 153 ----------------------LERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LA 202 (390)
T ss_dssp ----------------------CCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EE
T ss_pred ----------------------cCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cC
Confidence 3333444555555555555555555532 24455566666666666552 22
Q ss_pred cccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCcccee
Q 039419 245 KLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQL 324 (1035)
Q Consensus 245 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 324 (1035)
..++|++|++++|.+... |.. .+++|+.|++++|.+++. ..+..+++|++|++++|.+.+..|..|..+++|++|
T Consensus 203 ~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 277 (390)
T ss_dssp CCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred CCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEE
Confidence 334566666666666643 322 246788888888888753 467778888888888888887777788888888888
Q ss_pred ccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcce
Q 039419 325 QLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLI 404 (1035)
Q Consensus 325 ~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 404 (1035)
+|++|+|+. +|..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+|+... +
T Consensus 278 ~L~~n~l~~-----------~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~------- 335 (390)
T 3o6n_A 278 YISNNRLVA-----------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---L------- 335 (390)
T ss_dssp ECCSSCCCE-----------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---C-------
T ss_pred ECCCCcCcc-----------cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---c-------
Confidence 888887763 3455667788888888888887 45666777888888888888887542 2
Q ss_pred eEeeeccCCCCccceeecCCCccCCC
Q 039419 405 RLRLMSFGNCTQLQMLNLSNNTLGGT 430 (1035)
Q Consensus 405 ~L~~~~~~~l~~L~~L~L~~N~l~~~ 430 (1035)
..+++|++|++++|.++..
T Consensus 336 -------~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 336 -------STHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp -------CTTCCCSEEECCSSCEEHH
T ss_pred -------hhhccCCEEEcCCCCccch
Confidence 2346688888888888753
No 284
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.1e-35 Score=350.86 Aligned_cols=262 Identities=24% Similarity=0.305 Sum_probs=193.6
Q ss_pred HHHhccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeE
Q 039419 683 QVLKCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRF 761 (1035)
Q Consensus 683 ~~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 761 (1035)
...++|.+.+.||+|+||.||+|.+. +|+.||||++...... ...+.+.+|+.++++++||||+++
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~-------------~~~~~~~~Ei~iL~~L~HpnIV~l 77 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP-------------KNRERWCLEIQIMKKLNHPNVVSA 77 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCH-------------HHHHHHHHHHHHHHHCCBTTBCCE
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCH-------------HHHHHHHHHHHHHHhCCCCCCCce
Confidence 34578999999999999999999775 5899999998653221 125679999999999999999999
Q ss_pred EeEEEc------CCcceEEEEeCCCCChhhhhhhcCC-CCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEE
Q 039419 762 LGCCWN------RNTRLLMYDYMPNGSLGSLLHERRD-SCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILI 834 (1035)
Q Consensus 762 ~~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll 834 (1035)
++++.. .+..|+||||++||+|.+++..... ..+++..+..++.|++.||+|||+. ||+||||||+||++
T Consensus 78 ~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl 154 (676)
T 3qa8_A 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVL 154 (676)
T ss_dssp EECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEE
T ss_pred eeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEe
Confidence 998765 6678999999999999999986542 3488899999999999999999999 99999999999999
Q ss_pred cCCCc---eEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCch
Q 039419 835 GPEFE---PYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGL 911 (1035)
Q Consensus 835 ~~~~~---~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~ 911 (1035)
+.++. +||+|||.++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 155 ~~~g~~~~vKL~DFG~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---- 227 (676)
T 3qa8_A 155 QPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW---- 227 (676)
T ss_dssp ECCSSSCEEEECSCCCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----
T ss_pred ecCCCceeEEEccccccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----
Confidence 97765 8999999998765433 2235689999999999999999999999999999999999999996531
Q ss_pred hHHHHHHHhcc-------chhhhc------ccccCCCcccHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 039419 912 HIVDWVRQKRG-------AIEVLD------KSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPTMKDVA 967 (1035)
Q Consensus 912 ~~~~~~~~~~~-------~~~~~~------~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs~~el~ 967 (1035)
....|...... ..+... ................+..++.+||++||++|||++|++
T Consensus 228 ~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 228 QPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp HHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred chhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 11111110000 000000 000000000111122345688899999999999998854
No 285
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-34 Score=354.16 Aligned_cols=242 Identities=20% Similarity=0.253 Sum_probs=191.7
Q ss_pred hccccCCeeeeeCCcEEEEEEEC--CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME--NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
++|.+.+.||+|+||+||+|.+. +++.||||++...... ...+.+.+|+.++++++||||+++++
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~-------------~~~~~~~~E~~~l~~l~hp~iv~~~~ 146 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDA-------------EAQAMAMAERQFLAEVVHPSIVQIFN 146 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCH-------------HHHHHHHHHHGGGGGCCCTTBCCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCH-------------HHHHHHHHHHHHHHhcCCCCcCeEee
Confidence 67999999999999999999875 5899999998643211 12467899999999999999999999
Q ss_pred EEEcCCc-----ceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCC
Q 039419 764 CCWNRNT-----RLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEF 838 (1035)
Q Consensus 764 ~~~~~~~-----~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~ 838 (1035)
++...+. .|+||||++|++|.+++.. .+++..+..++.||++||+|||+. ||+||||||+||+++.+
T Consensus 147 ~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~- 218 (681)
T 2pzi_A 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE- 218 (681)
T ss_dssp EEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-
T ss_pred eEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-
Confidence 9987665 6999999999999988754 389999999999999999999999 99999999999999985
Q ss_pred ceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHH
Q 039419 839 EPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVR 918 (1035)
Q Consensus 839 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 918 (1035)
.+||+|||+++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||........
T Consensus 219 ~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~------- 284 (681)
T 2pzi_A 219 QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL------- 284 (681)
T ss_dssp CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC-------
T ss_pred cEEEEecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc-------
Confidence 8999999999865432 356799999999987664 48899999999999999999988864211100
Q ss_pred HhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHHHHHHh
Q 039419 919 QKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRP-TMKDVAAMIKEIKQE 976 (1035)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RP-s~~el~~~L~~~~~~ 976 (1035)
... ............++.+||++||++|| +++++.+.+..+.+.
T Consensus 285 -------------~~~-~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 285 -------------PED-DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp -------------CTT-CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred -------------ccc-ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 000 00011112345688899999999999 466666667665443
No 286
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-34 Score=334.44 Aligned_cols=251 Identities=17% Similarity=0.208 Sum_probs=180.7
Q ss_pred hccccCCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCC-Cce-----
Q 039419 686 KCLVEDSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRH-KNI----- 758 (1035)
Q Consensus 686 ~~~~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pni----- 758 (1035)
+.|...+.||+|+||+||+|.+. +|+.||||++........ ...+.+.+|+.+++.++| +|.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~-----------~~~~~~~~E~~~~~~l~~~~~~~~~~~ 146 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPS-----------NAIKQMKEEVLRLRLLRGIKNQKQAKV 146 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC---------------CCHHHHHHHHGGGGSTTCCSHHHHHH
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccH-----------HHHHHHHHHHHHHHhhccCCCHHHHHH
Confidence 45777889999999999999865 689999999874332221 124679999999999987 211
Q ss_pred ----------------eeEEeEEEc-----CCcceEEEEeCCCCChhhhhhh-----cCCCCCCHHHHHHHHHHHHHHHH
Q 039419 759 ----------------VRFLGCCWN-----RNTRLLMYDYMPNGSLGSLLHE-----RRDSCLEWELRYRIILGAAQGLA 812 (1035)
Q Consensus 759 ----------------v~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~-----~~~~~l~~~~~~~i~~~ia~~L~ 812 (1035)
..++.++.. ....+++|+++ +++|.++++. .....+++..+..++.||++||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 225 (413)
T 3dzo_A 147 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLA 225 (413)
T ss_dssp HTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHH
Confidence 111111221 12346677765 7899998852 22334778889999999999999
Q ss_pred HhhccCCCCeeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccCCcccccCCccc----------ccCCCCc
Q 039419 813 YLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYG----------YMMKITE 882 (1035)
Q Consensus 813 ~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~ 882 (1035)
|||++ +|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.
T Consensus 226 ~LH~~---~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~ 296 (413)
T 3dzo_A 226 SLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTF 296 (413)
T ss_dssp HHHHT---TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECH
T ss_pred HHHhC---CcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCc
Confidence 99999 9999999999999999999999999998865332 234567 999999998 5556888
Q ss_pred cccchhHHHHHHHHHhCCCCCCCCCCCchhHHHHHHHhccchhhhcccccCCCcccHHHHHHHHHHHHhccCCCCCCCCC
Q 039419 883 KSDVYSYGVVVLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAIEVLDKSLRARPEVEIEEMLQTLGVALLCVNPTPDDRPT 962 (1035)
Q Consensus 883 ~~Dv~SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~cl~~dP~~RPs 962 (1035)
++|||||||++|||++|+.||....... .....+...... . ..+.+++.+||++||++||+
T Consensus 297 ~~DvwSlGvil~elltg~~Pf~~~~~~~---------------~~~~~~~~~~~~--~--~~~~~li~~~l~~dP~~Rpt 357 (413)
T 3dzo_A 297 AFDTWTLGLAIYWIWCADLPNTDDAALG---------------GSEWIFRSCKNI--P--QPVRALLEGFLRYPKEDRLL 357 (413)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCCTTGGGS---------------CSGGGGSSCCCC--C--HHHHHHHHHHTCSSGGGSCC
T ss_pred hhhHHHHHHHHHHHHHCCCCCCCcchhh---------------hHHHHHhhcccC--C--HHHHHHHHHHccCChhhCcC
Confidence 9999999999999999999997542211 111111111111 1 22455788899999999999
Q ss_pred HHHHHHH--HHHHHHh
Q 039419 963 MKDVAAM--IKEIKQE 976 (1035)
Q Consensus 963 ~~el~~~--L~~~~~~ 976 (1035)
+.+++++ ++.+...
T Consensus 358 ~~~~l~~~~~~~~~~~ 373 (413)
T 3dzo_A 358 PLQAMETPEYEQLRTE 373 (413)
T ss_dssp HHHHTTSHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHH
Confidence 9999874 4555443
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.7e-34 Score=346.94 Aligned_cols=351 Identities=17% Similarity=0.134 Sum_probs=243.2
Q ss_pred CcccCCCCCCCCCCcc----ceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCC
Q 039419 5 PSALSNWNPSDSNPCK----WSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQL 80 (1035)
Q Consensus 5 ~~~l~~w~~~~~~~c~----w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L 80 (1035)
.+.+++|.... +||. |.++.|+.. +............--.+.+++.|++++|.+++..+..++.+++|
T Consensus 6 ~~~l~~~~~~~-~C~~~~~~~~c~~~~~~-------i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L 77 (597)
T 3oja_B 6 RYNVKPRQPEY-KCIDSNLQYDCVFYDVH-------IDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 77 (597)
T ss_dssp -----CCCSEE-CCCCC--CCSEEECSCE-------ECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCC
T ss_pred cccccCCCCCC-cCcccCcCceeEecCce-------ecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCC
Confidence 35678998875 5553 777777521 11111111111112346778888888888884333346778888
Q ss_pred ceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCC
Q 039419 81 TTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGN 160 (1035)
Q Consensus 81 ~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n 160 (1035)
++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..+..|+++++|++|++++|
T Consensus 78 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N 157 (597)
T 3oja_B 78 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 157 (597)
T ss_dssp SEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCC
Confidence 88888888888777778888888888888888888766777788888888888888887333333566666666666666
Q ss_pred cccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCC
Q 039419 161 KDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLP 240 (1035)
Q Consensus 161 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 240 (1035)
. +.+..|..|+.+++|++|++++|.+++. .+..+++|+.|++++|.+++
T Consensus 158 ~-------------------------l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~--- 206 (597)
T 3oja_B 158 N-------------------------LERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST--- 206 (597)
T ss_dssp C-------------------------CCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE---
T ss_pred c-------------------------CCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc---
Confidence 4 4444455556666666666666665532 24455666666666666653
Q ss_pred hhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCc
Q 039419 241 RELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATS 320 (1035)
Q Consensus 241 ~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 320 (1035)
+...++|+.|++++|.+....+. + .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+.+..|..|..+++
T Consensus 207 --l~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 279 (597)
T 3oja_B 207 --LAIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 279 (597)
T ss_dssp --EECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSS
T ss_pred --ccCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccC
Confidence 23345666777777776643322 2 2578888888888885 366888888888888888888888888888888
Q ss_pred cceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCC
Q 039419 321 LLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNC 400 (1035)
Q Consensus 321 L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l 400 (1035)
|+.|+|++|+|+. +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.|++.. +
T Consensus 280 L~~L~Ls~N~l~~-----------l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~--- 341 (597)
T 3oja_B 280 LERLYISNNRLVA-----------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---L--- 341 (597)
T ss_dssp CCEEECTTSCCCE-----------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---C---
T ss_pred CCEEECCCCCCCC-----------CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---h---
Confidence 8888888888763 3556677889999999999998 56777888999999999999988653 2
Q ss_pred CcceeEeeeccCCCCccceeecCCCccCCC
Q 039419 401 SSLIRLRLMSFGNCTQLQMLNLSNNTLGGT 430 (1035)
Q Consensus 401 ~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~ 430 (1035)
..+++|+.|+|++|.+++.
T Consensus 342 -----------~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 342 -----------STHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp -----------CTTCCCSEEECCSSCEEHH
T ss_pred -----------hhcCCCCEEEeeCCCCCCh
Confidence 2346789999999998854
No 288
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7.2e-34 Score=313.67 Aligned_cols=233 Identities=22% Similarity=0.279 Sum_probs=178.0
Q ss_pred HHHhccccC-CeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHH-hcCCCCcee
Q 039419 683 QVLKCLVED-SVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTL-GSIRHKNIV 759 (1035)
Q Consensus 683 ~~~~~~~~~-~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~hpniv 759 (1035)
.+.++|... +.||+|+||.||+|.+. +++.||+|++.. ...+.+|+.++ +..+||||+
T Consensus 14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------------------~~~~~~e~~~~~~~~~h~~i~ 74 (299)
T 3m2w_A 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------------------CPKARREVELHWRASQCPHIV 74 (299)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------------------SHHHHHHHHHHHHHTTSTTBC
T ss_pred ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------------------cHHHHHHHHHHHHhccCCCch
Confidence 345667776 78999999999999774 589999999842 23577899988 556899999
Q ss_pred eEEeEEEc----CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEc
Q 039419 760 RFLGCCWN----RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIG 835 (1035)
Q Consensus 760 ~l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~ 835 (1035)
++++++.. ....|+||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 75 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 151 (299)
T 3m2w_A 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYT 151 (299)
T ss_dssp CEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEES
T ss_pred hHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEe
Confidence 99999876 66789999999999999999887666699999999999999999999999 999999999999999
Q ss_pred C---CCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCchh
Q 039419 836 P---EFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPEGLH 912 (1035)
Q Consensus 836 ~---~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~~~~~~~~~ 912 (1035)
. ++.+||+|||++.... +..++.++|||||||++|||++|+.||........
T Consensus 152 ~~~~~~~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~- 206 (299)
T 3m2w_A 152 SKRPNAILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI- 206 (299)
T ss_dssp SSSTTCCEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------
T ss_pred cCCCCCcEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-
Confidence 8 7889999999986432 13456789999999999999999999975422100
Q ss_pred HHHHHHHhccchhhhcccccCCCccc-HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 039419 913 IVDWVRQKRGAIEVLDKSLRARPEVE-IEEMLQTLGVALLCVNPTPDDRPTMKDVAAM 969 (1035)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~l~~~cl~~dP~~RPs~~el~~~ 969 (1035)
...............+... ......+..++.+||+.||++||+++|++++
T Consensus 207 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 207 -------SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp --------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------hHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000000000000000000 0011234557888999999999999999985
No 289
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.1e-32 Score=309.02 Aligned_cols=260 Identities=23% Similarity=0.413 Sum_probs=161.4
Q ss_pred CCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhcccc
Q 039419 50 LSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLK 129 (1035)
Q Consensus 50 ~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 129 (1035)
+..+++|++|++++|.++ .++ .++.+++|++|++++|+++ .++. +..+++|++|+|++|.++ .+| .+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCccc-Cch-HHcCCCcCC
Confidence 457788899999999888 454 3888899999999999888 4554 888899999999999888 454 688889999
Q ss_pred ceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeeccc
Q 039419 130 NLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTT 209 (1035)
Q Consensus 130 ~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n 209 (1035)
+|++++|.+. .++. +..+++|++|++++|.... .+..+..+++|+.|++++|.+.+..+ +..+++|++|++++|
T Consensus 114 ~L~l~~n~i~-~~~~-~~~l~~L~~L~l~~n~~~~--~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 114 ELYLNEDNIS-DISP-LANLTKMYSLNLGANHNLS--DLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp EEECTTSCCC-CCGG-GTTCTTCCEEECTTCTTCC--CCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred EEECcCCccc-Cchh-hccCCceeEEECCCCCCcc--cccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 9999999887 4444 7888888888888885222 22335566666666666666553322 555566666666666
Q ss_pred ccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCc
Q 039419 210 MLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQ 289 (1035)
Q Consensus 210 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~ 289 (1035)
.+.+ ++. +..+++|+.|++++|.+++..+ +..+++|++|++++|++.+..+ +..+++|++|++++|.+++. .
T Consensus 188 ~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 259 (347)
T 4fmz_A 188 QIED-ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--N 259 (347)
T ss_dssp CCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--G
T ss_pred cccc-ccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--h
Confidence 5552 222 5555555555555555553322 4455555555555555553222 44555555555555555432 2
Q ss_pred cccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchh
Q 039419 290 SFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQI 331 (1035)
Q Consensus 290 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i 331 (1035)
.+..+++|++|++++|++++. ..+..+++|++|++++|++
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 260 AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcC
Confidence 344555555555555555432 2344444444444444444
No 290
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=7.7e-34 Score=319.05 Aligned_cols=251 Identities=12% Similarity=0.077 Sum_probs=184.4
Q ss_pred HhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC---------C
Q 039419 685 LKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR---------H 755 (1035)
Q Consensus 685 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---------h 755 (1035)
.++|...+.||+|+||+||+|++ +|+.||||++......... .......+.+.+|+.++++++ |
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~------~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h 91 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVN------GSHQKTFEEILPEIIISKELSLLSGEVCNRT 91 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBT------TBCCBCHHHHHHHHHHHHHHHHGGGCSSSBC
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccc------cccchhHHHHHHHHHHHHHHHHhhccccccC
Confidence 47899999999999999999988 5899999999765322100 001123578899999999886 7
Q ss_pred CceeeEEeEEE-----------------c-------------CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHH
Q 039419 756 KNIVRFLGCCW-----------------N-------------RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIIL 805 (1035)
Q Consensus 756 pniv~l~~~~~-----------------~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~ 805 (1035)
||||++.+.+. + .+..|+||||+++|++.+.+.. ..+++..+..++.
T Consensus 92 ~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~ 168 (336)
T 2vuw_A 92 EGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILH 168 (336)
T ss_dssp CCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHH
T ss_pred CchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHH
Confidence 77777777643 2 6788999999999977766644 3389999999999
Q ss_pred HHHHHHHHhh-ccCCCCeeccCCCcccEEEcCCC--------------------ceEEeeccCccccccCCccccccccC
Q 039419 806 GAAQGLAYLH-HDCVPPIVHRDIKANNILIGPEF--------------------EPYIADFGLAKLVVEGDFARSSNTVA 864 (1035)
Q Consensus 806 ~ia~~L~~LH-~~~~~~ivHrDikp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~~ 864 (1035)
||+.||+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...
T Consensus 169 qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~ 238 (336)
T 2vuw_A 169 QLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVV 238 (336)
T ss_dssp HHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEE
T ss_pred HHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEE
Confidence 9999999999 88 999999999999999887 8999999999876432 347
Q ss_pred CcccccCCcccccCCCCccccchhHHHH-HHHHHhCCCCCCCCCCCchhHHHHHHHhccch-hhhcccccCCCcccHHHH
Q 039419 865 GSYGYIAPEYGYMMKITEKSDVYSYGVV-VLEVLTGKQPIDPTIPEGLHIVDWVRQKRGAI-EVLDKSLRARPEVEIEEM 942 (1035)
Q Consensus 865 gt~~y~aPE~~~~~~~~~~~Dv~SlGvv-l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 942 (1035)
||+.|+|||++.+.. +.++||||+|++ .+++++|..||.. ..|........ ..................
T Consensus 239 gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 309 (336)
T 2vuw_A 239 FCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN--------VLWLHYLTDKMLKQMTFKTKCNTPAMKQIK 309 (336)
T ss_dssp CCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH--------HHHHHHHHHHHHHTCCCSSCCCSHHHHHHH
T ss_pred EeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc--------hhhhhHHHHhhhhhhccCcccchhhhhhcC
Confidence 999999999988766 899999998777 7888889998842 11211110000 000000011111111233
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHH-HH
Q 039419 943 LQTLGVALLCVNPTPDDRPTMKDVA-AM 969 (1035)
Q Consensus 943 ~~~l~l~~~cl~~dP~~RPs~~el~-~~ 969 (1035)
..+.+++.+||+.| |++|++ ++
T Consensus 310 ~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 310 RKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHHHhccC-----CHHHHHhcC
Confidence 45667899999876 999888 53
No 291
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.7e-32 Score=307.01 Aligned_cols=308 Identities=26% Similarity=0.315 Sum_probs=169.8
Q ss_pred cccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCC
Q 039419 194 SLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSL 273 (1035)
Q Consensus 194 ~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 273 (1035)
.+..+++|++|++++|.+. .++ .+..+++|++|++++|.+++. +. +..+++|++|++++|.+.. ++ .+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTC
T ss_pred cchhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcC
Confidence 3456667777777777666 333 366667777777777766633 32 6666666666666666653 22 46666666
Q ss_pred cEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCC
Q 039419 274 KTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCR 353 (1035)
Q Consensus 274 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~ 353 (1035)
++|++++|.+++..+ +..+++|++|++++|...... ..+..+++|++|++++|++..+ + .+..++
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~-----------~-~~~~l~ 177 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDV-----------T-PIANLT 177 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCC-----------G-GGGGCT
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCc-----------h-hhccCC
Confidence 666666666664322 566666666666666443222 2255555555555555554422 1 144555
Q ss_pred CCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcc
Q 039419 354 SLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPS 433 (1035)
Q Consensus 354 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~ 433 (1035)
+|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+
T Consensus 178 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~----------------~~~~~~L~~L~l~~n~l~~~~~- 238 (347)
T 4fmz_A 178 DLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP----------------VANMTRLNSLKIGNNKITDLSP- 238 (347)
T ss_dssp TCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG----------------GGGCTTCCEEECCSSCCCCCGG-
T ss_pred CCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch----------------hhcCCcCCEEEccCCccCCCcc-
Confidence 55555555555553222 4445555555555555443211 2223444555555555543222
Q ss_pred cccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccC
Q 039419 434 SLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGL 513 (1035)
Q Consensus 434 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l 513 (1035)
+..+++|++|++++|++++. ..+..+++|+.|++++|++++. ..+..+++|++|+|+
T Consensus 239 -~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~------------------ 295 (347)
T 4fmz_A 239 -LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLN------------------ 295 (347)
T ss_dssp -GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECC------------------
T ss_pred -hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECc------------------
Confidence 44444555555555554432 2344444444444444444432 224444444444444
Q ss_pred cceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCc
Q 039419 514 DISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFT 572 (1035)
Q Consensus 514 ~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~ 572 (1035)
+|.+++..+..+..+++|++|+|++|++++.++ +..+++|+.|++++|+|+
T Consensus 296 -------~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 296 -------NNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQVIK 346 (347)
T ss_dssp -------SSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC---
T ss_pred -------CCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhccc
Confidence 444444555566677888888888888887666 778888888888888875
No 292
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=2e-32 Score=303.51 Aligned_cols=259 Identities=29% Similarity=0.470 Sum_probs=174.9
Q ss_pred CCCcEEEccCccCCC--CCCccccCCCCCcEEEccC-CccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCc
Q 039419 271 KSLKTIDLSLNFFSG--SLPQSFGNLSSLEELMLSN-NNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPS 347 (1035)
Q Consensus 271 ~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~ 347 (1035)
.+++.|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|.++++|++|+|++|
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n------------------ 111 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT------------------ 111 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEE------------------
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCC------------------
Confidence 456677777777766 5666666777777777763 6666555555555555555555544
Q ss_pred CCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCcc
Q 039419 348 TLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTL 427 (1035)
Q Consensus 348 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l 427 (1035)
.+++.+|..|..+++|++|++++|.+++..|..+. ++++|++|+|++|++
T Consensus 112 ----------------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--------------~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 112 ----------------NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS--------------SLPNLVGITFDGNRI 161 (313)
T ss_dssp ----------------CCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG--------------GCTTCCEEECCSSCC
T ss_pred ----------------eeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHh--------------cCCCCCeEECcCCcc
Confidence 44444444444444444444444444444443332 234455566666666
Q ss_pred CCCCcccccCCC-CccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchh
Q 039419 428 GGTLPSSLASLT-RLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVE 506 (1035)
Q Consensus 428 ~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 506 (1035)
++.+|..+..++ +|++|++++|++++.+|..|..+. |+.|++++|++++..|..|..+++|++|+|++|++++.+|
T Consensus 162 ~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-- 238 (313)
T 1ogq_A 162 SGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-- 238 (313)
T ss_dssp EEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG--
T ss_pred cCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC--
Confidence 655666666666 677777777777766676776665 7777777777777777777777777777777777763322
Q ss_pred hhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccC-ccccccccCCCcEEeccCCcCcccCCChhhhhccc
Q 039419 507 LFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGG-DLLALSGLDNLVSLNVSYNNFTGYLPDSKLFRQLS 585 (1035)
Q Consensus 507 ~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~ 585 (1035)
.+..+++|++|+|++|++++ .+..+..+++|+.|+|++|+++|.+|....+++++
T Consensus 239 ------------------------~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~ 294 (313)
T 1ogq_A 239 ------------------------KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFD 294 (313)
T ss_dssp ------------------------GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSC
T ss_pred ------------------------cccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccC
Confidence 13445778888888888874 45678888999999999999999999988899999
Q ss_pred cccccccccCCCCCCCCCc
Q 039419 586 ATEMAGNQGLCSRGHESCF 604 (1035)
Q Consensus 586 ~~~~~~N~~~c~~~~~~c~ 604 (1035)
.+++.+|+++|+.|...|.
T Consensus 295 ~l~l~~N~~lc~~p~~~C~ 313 (313)
T 1ogq_A 295 VSAYANNKCLCGSPLPACT 313 (313)
T ss_dssp GGGTCSSSEEESTTSSCCC
T ss_pred hHHhcCCCCccCCCCCCCC
Confidence 9999999999999888773
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.7e-31 Score=297.73 Aligned_cols=288 Identities=22% Similarity=0.298 Sum_probs=180.3
Q ss_pred ceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcc
Q 039419 176 SLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLW 255 (1035)
Q Consensus 176 ~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 255 (1035)
+++.++++++.+. .+|..+. ++|++|++++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3444555555554 3444332 456666666666665445566666666666666666665556666666666666666
Q ss_pred cccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccc--cCCCCcccCCCccceeccccchhhh
Q 039419 256 QNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNIS--GSIPPVLSNATSLLQLQLDTNQISV 333 (1035)
Q Consensus 256 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~i~~ 333 (1035)
+|++. .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..+..|..+ +|++|++++|+++.
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 66666 3444333 66777777777777655556777777777777777774 2556666666 77777777776652
Q ss_pred hhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCC
Q 039419 334 FFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGN 413 (1035)
Q Consensus 334 l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~ 413 (1035)
+|..+. ++|++|++++|.+++..+..+..+++|++|++++|++++..+..+. .
T Consensus 187 -----------l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~--------------~ 239 (332)
T 2ft3_A 187 -----------IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLS--------------F 239 (332)
T ss_dssp -----------CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGG--------------G
T ss_pred -----------cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhh--------------C
Confidence 333332 5677777777777766666677777777777777777665554433 3
Q ss_pred CCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCc------cccchhhccCCccc--ccCccccCC
Q 039419 414 CTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQL------ASLNRLILSKNSFS--GAIPSSLGR 485 (1035)
Q Consensus 414 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~--~~~~~~~~~ 485 (1035)
+++|++|+|++|+++ .+|..+..+++|++|++++|+|+++.+..|... ..|+.|++++|.+. +..|..|..
T Consensus 240 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 318 (332)
T 2ft3_A 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318 (332)
T ss_dssp CTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTT
T ss_pred CCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccc
Confidence 455777777777777 556667777777777777777776666666543 45667777777665 456666777
Q ss_pred CCCCcEEEcCCCc
Q 039419 486 CESLQSLDLSSNK 498 (1035)
Q Consensus 486 l~~L~~L~Ls~N~ 498 (1035)
+++|+.|+|++|+
T Consensus 319 l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 319 VTDRLAIQFGNYK 331 (332)
T ss_dssp BCCSTTEEC----
T ss_pred cchhhhhhccccc
Confidence 7777777777664
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2.6e-31 Score=297.60 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=176.3
Q ss_pred CccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChh
Q 039419 18 PCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSS 97 (1035)
Q Consensus 18 ~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~ 97 (1035)
.|.|+.+.|+.. ++. .+|..+. +.|++|+|++|.+++..+..++.+++|++|+|++|++++..|..
T Consensus 30 ~c~l~~l~~~~~-----------~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 95 (330)
T 1xku_A 30 QCHLRVVQCSDL-----------GLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA 95 (330)
T ss_dssp EEETTEEECTTS-----------CCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTT
T ss_pred cCCCeEEEecCC-----------Ccc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHH
Confidence 367777777643 222 3444443 56788888888888666667888888888888888888666888
Q ss_pred hhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccce
Q 039419 98 IGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSL 177 (1035)
Q Consensus 98 i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 177 (1035)
++.+++|++|+|++|+++ .+|..+. ++|++|++++|.+.+..+..++++++|++|++++|....
T Consensus 96 ~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------- 159 (330)
T 1xku_A 96 FAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS------------- 159 (330)
T ss_dssp TTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG-------------
T ss_pred hcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc-------------
Confidence 888888888888888887 5666554 678888888888775555667777777777777664110
Q ss_pred EEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccc
Q 039419 178 LVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQN 257 (1035)
Q Consensus 178 ~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 257 (1035)
.+..+..+..+++|++|++++|.++ .+|..+. ++|+.|++++|.+++..+..|..+++|++|++++|
T Consensus 160 ----------~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 226 (330)
T 1xku_A 160 ----------SGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 226 (330)
T ss_dssp ----------GGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSS
T ss_pred ----------cCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 1234555666667777777777666 4555443 56777777777777666667777777777777777
Q ss_pred cccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCccc
Q 039419 258 NFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLS 316 (1035)
Q Consensus 258 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 316 (1035)
.+.+..+..+..+++|+.|+|++|+++ .+|..+..+++|++|++++|+|++..+..|.
T Consensus 227 ~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 227 SISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp CCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred cCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 777666666777777777777777777 5666677777777777777777766665554
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.6e-31 Score=297.86 Aligned_cols=270 Identities=21% Similarity=0.260 Sum_probs=191.0
Q ss_pred cccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceec
Q 039419 54 SFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLL 133 (1035)
Q Consensus 54 ~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 133 (1035)
++|++|+|++|.+++..|..++.+++|++|+|++|++++..|..++.+++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 45666666666666555556666666666666666666555666666666666666666666 4554444 56666666
Q ss_pred cccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEecccccc--ccCcccccccccccceeeccccc
Q 039419 134 FDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVA--GSLPASLGKLSKLQSLSVYTTML 211 (1035)
Q Consensus 134 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~--~~~p~~l~~l~~L~~L~l~~n~l 211 (1035)
++|.+.+..+..++.+++|++|++++| .+. +..+..+..+ +|++|++++|.+
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n-------------------------~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGN-------------------------PLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSC-------------------------CCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCC-------------------------ccccCCCCcccccCC-ccCEEECcCCCC
Confidence 666665333344555555555555555 443 2456667777 788888888888
Q ss_pred ccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccc
Q 039419 212 SGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSF 291 (1035)
Q Consensus 212 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~ 291 (1035)
+ .+|..+. ++|+.|+|++|.+++..+..|..+++|+.|++++|++.+..+..+..+++|+.|+|++|+++ .+|..+
T Consensus 185 ~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 185 T-GIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp S-SCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred C-ccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 7 4666554 67888888888888777778888888888888888888777778888888999999999888 677778
Q ss_pred cCCCCCcEEEccCCccccCCCCcccCC------CccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcC
Q 039419 292 GNLSSLEELMLSNNNISGSIPPVLSNA------TSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNA 364 (1035)
Q Consensus 292 ~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 364 (1035)
..+++|++|++++|+|+...+..|... ..|+.|++++|.+... +..|.+|..+++|+.+++++|+
T Consensus 261 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~--------~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW--------EVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG--------GSCGGGGTTBCCSTTEEC----
T ss_pred hcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc--------ccCcccccccchhhhhhccccc
Confidence 888889999999998887777777653 6688899998887643 2345778889999999998885
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=7e-31 Score=294.13 Aligned_cols=279 Identities=18% Similarity=0.173 Sum_probs=206.8
Q ss_pred ccceeEEeCC---CCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCC
Q 039419 19 CKWSHITCSP---QNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVP 95 (1035)
Q Consensus 19 c~w~gi~c~~---~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p 95 (1035)
|+..+++.-+ ...++.|+++++++.+..+..+..+++|++|+|++|.+++..|..++.+++|++|+|++|+++ .+|
T Consensus 38 ~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~ 116 (330)
T 1xku_A 38 CSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELP 116 (330)
T ss_dssp CTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCC
T ss_pred ecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccC
Confidence 5555554432 246789999999999888888999999999999999999878999999999999999999999 778
Q ss_pred hhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCC--CCchhhccccccceeecCCCcccCCCCCCcCCC
Q 039419 96 SSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSG--NLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGD 173 (1035)
Q Consensus 96 ~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~--~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~ 173 (1035)
..+. ++|++|++++|++++..+..+..+++|++|++++|.+.. ..+..+..+++|++|++++|. ...+|..
T Consensus 117 ~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~--l~~l~~~--- 189 (330)
T 1xku_A 117 EKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN--ITTIPQG--- 189 (330)
T ss_dssp SSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC--CCSCCSS---
T ss_pred hhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCc--cccCCcc---
Confidence 7765 799999999999997777789999999999999999963 567788888888888888886 2223322
Q ss_pred ccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhh
Q 039419 174 CQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKML 253 (1035)
Q Consensus 174 l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 253 (1035)
+. ++|++|++++|.+++..|..+..+++|+.|+|++|.+++..+..|..+++|++|+
T Consensus 190 ---------------------~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 246 (330)
T 1xku_A 190 ---------------------LP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246 (330)
T ss_dssp ---------------------CC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred ---------------------cc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEE
Confidence 21 4566666666666655566666666777777777776665555666777777777
Q ss_pred cccccccccCCccccCCCCCcEEEccCccCCCCCCccccCC------CCCcEEEccCCcccc--CCCCcccCCCccceec
Q 039419 254 LWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNL------SSLEELMLSNNNISG--SIPPVLSNATSLLQLQ 325 (1035)
Q Consensus 254 l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l------~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~ 325 (1035)
+++|++. .+|..+..+++|++|+|++|+|++..+..|... +.|+.|++++|.+.. +.|..|..+.+++.++
T Consensus 247 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~ 325 (330)
T 1xku_A 247 LNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQ 325 (330)
T ss_dssp CCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEE
T ss_pred CCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEE
Confidence 7777776 566677777888888888888876666666433 566667777776642 3344455555555555
Q ss_pred cccc
Q 039419 326 LDTN 329 (1035)
Q Consensus 326 L~~N 329 (1035)
|++|
T Consensus 326 L~~N 329 (330)
T 1xku_A 326 LGNY 329 (330)
T ss_dssp C---
T ss_pred eccc
Confidence 5544
No 297
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=9.6e-32 Score=299.84 Aligned_cols=265 Identities=19% Similarity=0.210 Sum_probs=185.1
Q ss_pred ccCCCC---CCCCCCccceeEEeCCCCcEEEEEecCCcccccCCcCC--CCCcccceEeecCcccCCCCCCCCCCCCCCc
Q 039419 7 ALSNWN---PSDSNPCKWSHITCSPQNFVTEINIQSIELELPFPSNL--SSLSFLQKLIISGSNLTGPISPDLGDCTQLT 81 (1035)
Q Consensus 7 ~l~~w~---~~~~~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~--~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~ 81 (1035)
.+++|. ....++|.|.|++|+.. +..+ ...+.++.|+|++|.++ .+|+.++.+++|+
T Consensus 46 ~~~~w~~~~~~~~~~~~~~g~~~~~~-----------------~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~ 107 (328)
T 4fcg_A 46 WHSAWRQANSNNPQIETRTGRALKAT-----------------ADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQ 107 (328)
T ss_dssp HHHHHHHHTTTCTTSCCSHHHHHHHH-----------------HHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCS
T ss_pred hhhhhcccccccccccccCCcchhhh-----------------HHHHhcccccceeEEEccCCCch-hcChhhhhCCCCC
Confidence 356783 33457899999999521 1111 12466888889999888 7888888899999
Q ss_pred eeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCc
Q 039419 82 TIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNK 161 (1035)
Q Consensus 82 ~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 161 (1035)
+|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..++..
T Consensus 108 ~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~------------ 173 (328)
T 4fcg_A 108 HMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST------------ 173 (328)
T ss_dssp EEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE------------
T ss_pred EEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc------------
Confidence 9999999888 88888889999999999999888 788888888889999998888777777655431
Q ss_pred ccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCCh
Q 039419 162 DIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPR 241 (1035)
Q Consensus 162 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~ 241 (1035)
..+..+..+++|++|++++|.++ .+|..++++++|+.|+|++|.++ .+|.
T Consensus 174 ----------------------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~ 223 (328)
T 4fcg_A 174 ----------------------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGP 223 (328)
T ss_dssp ----------------------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCG
T ss_pred ----------------------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCch
Confidence 11223445556666666666665 55666666666666666666666 3444
Q ss_pred hhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCcc
Q 039419 242 ELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSL 321 (1035)
Q Consensus 242 ~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 321 (1035)
.++.+++|++|++++|++.+.+|..+..+++|+.|+|++|.+.+.+|..|.++++|++|+|++|++.+.+|..+.++++|
T Consensus 224 ~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L 303 (328)
T 4fcg_A 224 AIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303 (328)
T ss_dssp GGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTT
T ss_pred hhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCc
Confidence 56666666666666666666666666666666667776666666666666666677777777666666666666667777
Q ss_pred ceeccccchhhh
Q 039419 322 LQLQLDTNQISV 333 (1035)
Q Consensus 322 ~~L~L~~N~i~~ 333 (1035)
+.+++..|.+..
T Consensus 304 ~~l~l~~~~~~~ 315 (328)
T 4fcg_A 304 CIILVPPHLQAQ 315 (328)
T ss_dssp CEEECCGGGSCC
T ss_pred eEEeCCHHHHHH
Confidence 776666665543
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.8e-33 Score=329.35 Aligned_cols=384 Identities=21% Similarity=0.171 Sum_probs=276.6
Q ss_pred cceEEEEeccccccccCccc-ccccccccceeeccccccc----CCccccccCcCCceEEecCCcCCCCCChhhh-ccc-
Q 039419 175 QSLLVVGLADTKVAGSLPAS-LGKLSKLQSLSVYTTMLSG----EIPPQIGNCSELVDLFLYENDLSGSLPRELG-KLQ- 247 (1035)
Q Consensus 175 ~~L~~L~l~~~~~~~~~p~~-l~~l~~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~-~l~- 247 (1035)
++|+.|+++++++++..... +..+++|++|++++|.+++ .++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56777888877776554443 7788899999999998874 3466777889999999999988765454443 355
Q ss_pred ---chhHhhcccccccc----cCCccccCCCCCcEEEccCccCCCCCCcccc-----CCCCCcEEEccCCccccCC----
Q 039419 248 ---KLEKMLLWQNNFDG----AIPEEIGNCKSLKTIDLSLNFFSGSLPQSFG-----NLSSLEELMLSNNNISGSI---- 311 (1035)
Q Consensus 248 ---~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~---- 311 (1035)
+|++|++++|++.. .++..+..+++|++|+|++|.+++..+..+. ..++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 69999999999884 5588888999999999999998754444332 3568999999999988643
Q ss_pred CCcccCCCccceeccccchhhhhhhhccccCCCCCcCC-CCCCCCcEEeccCcCCCCC----CCCCcccCcccceEeccc
Q 039419 312 PPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTL-ANCRSLEAVDLSHNALTGS----LHPGLFQLQNLTKLLLIS 386 (1035)
Q Consensus 312 ~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~ 386 (1035)
+..+..+++|++|++++|+|+..... .+...+ ...++|++|+|++|.++.. ++..+..+++|++|++++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~------~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 236 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVR------VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS 236 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHH------HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCS
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHH------HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccC
Confidence 55667789999999999998754220 011111 1356899999999999854 355677789999999999
Q ss_pred cccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCC----CcccccCCCCccEEEcCCCccCCCCchhccC-
Q 039419 387 NGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGT----LPSSLASLTRLQVLDISVNQFVGLIPESFGQ- 461 (1035)
Q Consensus 387 N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~- 461 (1035)
|++++.....+. ...+..+++|++|+|++|++++. ++..+..+++|++|+|++|++.+..+..+..
T Consensus 237 n~l~~~~~~~l~---------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~ 307 (461)
T 1z7x_W 237 NKLGDVGMAELC---------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET 307 (461)
T ss_dssp SBCHHHHHHHHH---------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH
T ss_pred CcCChHHHHHHH---------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHH
Confidence 988753111100 01123467899999999999854 5677788999999999999987654444443
Q ss_pred ----ccccchhhccCCccccc----CccccCCCCCCcEEEcCCCcCcCccchhhhhh----ccCcceeeccCccCCC---
Q 039419 462 ----LASLNRLILSKNSFSGA----IPSSLGRCESLQSLDLSSNKLSGKIPVELFEI----EGLDISLNLSWNALSG--- 526 (1035)
Q Consensus 462 ----l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~----~~l~~~L~Ls~N~l~~--- 526 (1035)
.++|+.|++++|.+++. ++..+..+++|++|+|++|.+++..+..+... ...+..|++++|.+++
T Consensus 308 l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~ 387 (461)
T 1z7x_W 308 LLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSC 387 (461)
T ss_dssp HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHH
T ss_pred hccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhH
Confidence 36899999999999865 46667788999999999999986555555432 1234467788887775
Q ss_pred -CCCccccCCccccEEeccCCcccCcc-cc----c-cccCCCcEEeccCCcCcc
Q 039419 527 -AIPPQISALNKLSILDLSHNKLGGDL-LA----L-SGLDNLVSLNVSYNNFTG 573 (1035)
Q Consensus 527 -~~~~~~~~l~~L~~L~L~~N~l~~~~-~~----~-~~l~~L~~L~ls~N~l~~ 573 (1035)
.+|..+..+++|++|+|++|++++.. .. + ....+|+.|++.+|.+..
T Consensus 388 ~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 388 SSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp HHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred HHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 56667777777888888888776532 11 1 123457777777766654
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=1.2e-33 Score=332.56 Aligned_cols=259 Identities=20% Similarity=0.157 Sum_probs=138.4
Q ss_pred CCCCceeeCCCCCCCCCCChh-hhccccccceEecccCCCCC----CchhhhhhccccceeccccccCCCCchhhcc-cc
Q 039419 77 CTQLTTIDVSSNSLVGGVPSS-IGKLINLQDLILNSNQLTGE----IPKELGACIKLKNLLLFDNYLSGNLPVELGK-LV 150 (1035)
Q Consensus 77 l~~L~~L~ls~n~l~~~~p~~-i~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~-l~ 150 (1035)
+++|++|||++|++++..... +..+++|++|+|++|++++. ++..+..+++|++|+|++|.+.+..+..+.. ++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 356788888888887443333 67788888888888887742 4556666788888888888876544444332 33
Q ss_pred ----ccceeecCCCcccCCCCCCcCCCccceEEEEeccccccc----cCcccccccccccceeecccccccCCcccccc-
Q 039419 151 ----NLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAG----SLPASLGKLSKLQSLSVYTTMLSGEIPPQIGN- 221 (1035)
Q Consensus 151 ----~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~----~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~- 221 (1035)
+|++|++++|. +++ .++..+..+++|++|++++|.+.+..+..+..
T Consensus 82 ~~~~~L~~L~L~~n~-------------------------i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~ 136 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCC-------------------------LTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEG 136 (461)
T ss_dssp STTCCCCEEECTTSC-------------------------CBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHH
T ss_pred hCCCceeEEEccCCC-------------------------CCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHH
Confidence 35555555553 332 33555555555666666555555433333222
Q ss_pred ----CcCCceEEecCCcCCCCC----ChhhhcccchhHhhcccccccccCCcccc-----CCCCCcEEEccCccCCCC--
Q 039419 222 ----CSELVDLFLYENDLSGSL----PRELGKLQKLEKMLLWQNNFDGAIPEEIG-----NCKSLKTIDLSLNFFSGS-- 286 (1035)
Q Consensus 222 ----l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~l~~n~l~~~~p~~~~-----~l~~L~~L~L~~n~l~~~-- 286 (1035)
.++|++|+|++|.+++.. +..+..+++|++|++++|.+.+..+..+. ..++|++|+|++|.+++.
T Consensus 137 l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~ 216 (461)
T 1z7x_W 137 LLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNC 216 (461)
T ss_dssp HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHH
T ss_pred HhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHH
Confidence 334666666666555422 33334445555555555555433332222 244566666666666542
Q ss_pred --CCccccCCCCCcEEEccCCccccCC-----CCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEe
Q 039419 287 --LPQSFGNLSSLEELMLSNNNISGSI-----PPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVD 359 (1035)
Q Consensus 287 --~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~ 359 (1035)
++..+..+++|++|++++|++.+.. +..+..+++|++|++++|+|+..... .++..+..+++|++|+
T Consensus 217 ~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~------~l~~~l~~~~~L~~L~ 290 (461)
T 1z7x_W 217 RDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG------DLCRVLRAKESLKELS 290 (461)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH------HHHHHHHHCTTCCEEE
T ss_pred HHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHH------HHHHHHhhCCCcceEE
Confidence 2444555566666666666554321 11222345555555555555432110 1223344455555555
Q ss_pred ccCcCCC
Q 039419 360 LSHNALT 366 (1035)
Q Consensus 360 Ls~N~l~ 366 (1035)
|++|.++
T Consensus 291 Ls~n~i~ 297 (461)
T 1z7x_W 291 LAGNELG 297 (461)
T ss_dssp CTTCCCH
T ss_pred CCCCCCc
Confidence 5555554
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.6e-30 Score=289.02 Aligned_cols=284 Identities=20% Similarity=0.218 Sum_probs=215.8
Q ss_pred CCCCCCCCCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCC
Q 039419 10 NWNPSDSNPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNS 89 (1035)
Q Consensus 10 ~w~~~~~~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~ 89 (1035)
.|... ..+|.|.|+ |+- ++++++ .+|..+. ++|++|+|++|.+++..+..++.+++|++|+|++|+
T Consensus 22 ~~~~~-~~~C~~~~~-c~~---------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQA-SLSCDRNGI-CKG---------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp ------CCEECTTSE-EEC---------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCcc-CCCCCCCeE-eeC---------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 34443 357999998 753 344555 4666555 489999999999997666689999999999999999
Q ss_pred CCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCch--hhccccccceeecCCCcccCCCC
Q 039419 90 LVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPV--ELGKLVNLEVIRAGGNKDIAGKI 167 (1035)
Q Consensus 90 l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~--~l~~l~~L~~L~l~~n~~~~~~~ 167 (1035)
+++..|..++++++|++|+|++|++++..+..+..+++|++|++++|+++ .+|. .++.+++|++|++++|..+....
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccC
Confidence 99777888999999999999999999544445899999999999999998 5665 78999999999999986555556
Q ss_pred CCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccc-cccCcCCceEEecCCcCCCCCChhhh--
Q 039419 168 PYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQ-IGNCSELVDLFLYENDLSGSLPRELG-- 244 (1035)
Q Consensus 168 ~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~~~~l~-- 244 (1035)
+..++.+++|+.|++++|.+.+..|..++.+++|++|++++|.+. .+|.. +..+++|+.|++++|.+++..+..+.
T Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 245 (353)
T 2z80_A 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTG 245 (353)
T ss_dssp TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC-----
T ss_pred HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccc
Confidence 678888999999999999998888889999999999999999887 44444 45688899999999988876554433
Q ss_pred -cccchhHhhcccccccc----cCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCcccc
Q 039419 245 -KLQKLEKMLLWQNNFDG----AIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISG 309 (1035)
Q Consensus 245 -~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 309 (1035)
....++.++++++.+.+ .+|..+..+++|+.|+|++|+|+...+..|.++++|++|+|++|.+.+
T Consensus 246 ~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 246 ETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp -CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 23445555555555543 356667777777777777777774333345677777777777777664
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=4.2e-32 Score=330.07 Aligned_cols=141 Identities=17% Similarity=0.174 Sum_probs=85.0
Q ss_pred CCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCccc---CCCCCCCCC------------CCCCCc
Q 039419 17 NPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNL---TGPISPDLG------------DCTQLT 81 (1035)
Q Consensus 17 ~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l---~~~~~~~~~------------~l~~L~ 81 (1035)
-|++|+++.+..... +.+.. ......+..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 40 vck~W~~~~~~~~~~---l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 40 VCRRWFKIDSETREH---VTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp SCHHHHHHHHHHCCE---EEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HhHHHHHhhhccccE---EEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 356899997643322 22221 12223344456788899999988632 245555555 567777
Q ss_pred eeeCCCCCCCCCCChhhhcc--ccccceEecccC-CCC-CCchhhhhhccccceeccccccCCC----Cchhhccccccc
Q 039419 82 TIDVSSNSLVGGVPSSIGKL--INLQDLILNSNQ-LTG-EIPKELGACIKLKNLLLFDNYLSGN----LPVELGKLVNLE 153 (1035)
Q Consensus 82 ~L~ls~n~l~~~~p~~i~~l--~~L~~L~L~~n~-l~~-~~p~~l~~l~~L~~L~l~~n~l~~~----~p~~l~~l~~L~ 153 (1035)
+|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++..+..+++|++|+|++|.+.+. ++..+..+++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 77777777776666666653 347777777765 221 1222334667777777777776654 333445566667
Q ss_pred eeecCCCc
Q 039419 154 VIRAGGNK 161 (1035)
Q Consensus 154 ~L~l~~n~ 161 (1035)
+|++++|.
T Consensus 196 ~L~L~~n~ 203 (592)
T 3ogk_B 196 VLNFYMTE 203 (592)
T ss_dssp EEECTTCC
T ss_pred EEEeeccC
Confidence 77666664
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.2e-29 Score=277.40 Aligned_cols=253 Identities=22% Similarity=0.234 Sum_probs=185.5
Q ss_pred CCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCC-CCCCCCCCceeeCCCCCCC--CC
Q 039419 17 NPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISP-DLGDCTQLTTIDVSSNSLV--GG 93 (1035)
Q Consensus 17 ~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~-~~~~l~~L~~L~ls~n~l~--~~ 93 (1035)
+.|.|.+|.|+..+ ++ .+|..+. ++|++|+|++|.+++ +|. .++.+++|++|+|++|+++ +.
T Consensus 5 C~C~~~~l~c~~~~-----------l~-~ip~~~~--~~l~~L~L~~n~l~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 5 CSCSGTEIRCNSKG-----------LT-SVPTGIP--SSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp CEEETTEEECCSSC-----------CS-SCCSCCC--TTCCEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred CeeCCCEEEcCCCC-----------cc-cCCCCCC--CCCCEEECCCCccCc-cCHhHhhccccCCEEECCCCccCcccC
Confidence 45999999998543 22 3444443 578899999999984 554 4788999999999999887 22
Q ss_pred CChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCc-hhhccccccceeecCCCcccCCCCCCcCC
Q 039419 94 VPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLP-VELGKLVNLEVIRAGGNKDIAGKIPYEIG 172 (1035)
Q Consensus 94 ~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~~n~~~~~~~~~~~~ 172 (1035)
.|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n------------ 136 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT------------ 136 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTS------------
T ss_pred cccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCC------------
Confidence 3677778888888888888887 677778888888888888888774332 34555555555555554
Q ss_pred CccceEEEEeccccccccCcccccccccccceeeccccccc-CCccccccCcCCceEEecCCcCCCCCChhhhcccchhH
Q 039419 173 DCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSG-EIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEK 251 (1035)
Q Consensus 173 ~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 251 (1035)
.+.+..+..+..+++|++|++++|.+.+ .+|..+..+++|+.|+|++|.+++..|..|..+++|++
T Consensus 137 -------------~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 203 (306)
T 2z66_A 137 -------------HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 203 (306)
T ss_dssp -------------CCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred -------------cCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCE
Confidence 4555556666777777777777777765 46667777777777777777777666777777777777
Q ss_pred hhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCC-CCcEEEccCCccccC
Q 039419 252 MLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLS-SLEELMLSNNNISGS 310 (1035)
Q Consensus 252 L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~ 310 (1035)
|++++|++++..+..+..+++|+.|+|++|++++..+..+..++ +|++|+|++|.+...
T Consensus 204 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 204 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp EECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred EECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 77777777766666777788888888888888877777787774 788888888888753
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=2.6e-28 Score=270.07 Aligned_cols=85 Identities=27% Similarity=0.412 Sum_probs=38.8
Q ss_pred ccceeecCCCccCCCCcccccCCCCccEEEcCCCccCC-CCchhccCccccchhhccCCcccccCccccCCCCCCcEEEc
Q 039419 416 QLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVG-LIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDL 494 (1035)
Q Consensus 416 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 494 (1035)
+|++|++++|++++..+..|..+++|++|++++|++.+ ..|..|..+++|+.|++++|++++..|..|..+++|++|+|
T Consensus 127 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 206 (306)
T 2z66_A 127 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206 (306)
T ss_dssp TCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEEC
Confidence 34444444444444444444444444444444444443 23444444444444444444444444444444444555544
Q ss_pred CCCcCc
Q 039419 495 SSNKLS 500 (1035)
Q Consensus 495 s~N~l~ 500 (1035)
++|+++
T Consensus 207 ~~N~l~ 212 (306)
T 2z66_A 207 SHNNFF 212 (306)
T ss_dssp TTSCCS
T ss_pred CCCccC
Confidence 444444
No 304
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.8e-29 Score=299.00 Aligned_cols=195 Identities=15% Similarity=0.092 Sum_probs=133.1
Q ss_pred eeeeeCCcEEEEEE-ECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcC-CCCceeeEEeEEEcCCc
Q 039419 693 VVGKGCSGIVYRAE-MENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSI-RHKNIVRFLGCCWNRNT 770 (1035)
Q Consensus 693 ~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 770 (1035)
..+.|++|.+..++ .--|+.||+|++............+ .....++|.+|+++|+++ .|+||+++++++++++.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~----~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~ 316 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEE----SQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS 316 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHH----HHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhh----hHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE
Confidence 35677777777663 3348899999997543222111000 012356799999999999 69999999999999999
Q ss_pred ceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeeccCccc
Q 039419 771 RLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKL 850 (1035)
Q Consensus 771 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~ 850 (1035)
.||||||++|++|.+++...+. ++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+.
T Consensus 317 ~yLVMEyv~G~~L~d~i~~~~~--l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~ 388 (569)
T 4azs_A 317 GWLVMEKLPGRLLSDMLAAGEE--IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVT 388 (569)
T ss_dssp EEEEEECCCSEEHHHHHHTTCC--CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEES
T ss_pred EEEEEecCCCCcHHHHHHhCCC--CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCee
Confidence 9999999999999999987654 5554 5889999999999999 999999999999999999999999999987
Q ss_pred cccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 039419 851 VVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQP 902 (1035)
Q Consensus 851 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P 902 (1035)
..... ......+||+.|||||++.+ .+..++|+||+|++++++.++..|
T Consensus 389 ~~~~~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 389 TPQDC--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp CC-----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCC--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 64432 22345689999999999865 467789999999998887665444
No 305
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=6.1e-28 Score=272.83 Aligned_cols=271 Identities=19% Similarity=0.176 Sum_probs=195.4
Q ss_pred ccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceecc
Q 039419 55 FLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLF 134 (1035)
Q Consensus 55 ~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 134 (1035)
.....++++++++ .+|..+. ++|++|+|++|++++..+..+.++++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 32 ~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 32 RNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp TTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 3445788999999 7888766 589999999999996666689999999999999999997777889999999999999
Q ss_pred ccccCCCCchhhccccccceeecCCCcccCCCCCC--cCCCccceEEEEeccc-cccccCcccccccccccceeeccccc
Q 039419 135 DNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPY--EIGDCQSLLVVGLADT-KVAGSLPASLGKLSKLQSLSVYTTML 211 (1035)
Q Consensus 135 ~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~--~~~~l~~L~~L~l~~~-~~~~~~p~~l~~l~~L~~L~l~~n~l 211 (1035)
+|++++..+..++++++|++|++++|. ...+|. .+..+++|+.|++++| .+.+..+..|+.+++|++|++++|.+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~--l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNP--YKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCC--CSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCC--CcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 999995444458999999999999997 334554 6778888888888887 46656667788888888888888888
Q ss_pred ccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCcccc---CCCCCcEEEccCccCCC---
Q 039419 212 SGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIG---NCKSLKTIDLSLNFFSG--- 285 (1035)
Q Consensus 212 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~---~l~~L~~L~L~~n~l~~--- 285 (1035)
++..|..+..+++|++|++++|.++...+..+..+++|++|++++|.+++..+..+. ....++.++|+++.+++
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l 266 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESL 266 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHH
T ss_pred CccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcch
Confidence 877778888888888888888887633333344567777777777777755444332 34456666666665553
Q ss_pred -CCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccch
Q 039419 286 -SLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQ 330 (1035)
Q Consensus 286 -~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 330 (1035)
.+|..+.++++|++|++++|+++.+.+..|..+++|++|+|++|+
T Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 312 (353)
T 2z80_A 267 FQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNP 312 (353)
T ss_dssp HHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred hhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCC
Confidence 234445556666666666666653333334444444444444443
No 306
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=2.6e-30 Score=314.26 Aligned_cols=347 Identities=15% Similarity=0.126 Sum_probs=185.1
Q ss_pred ccceEEEEecccccccc----Ccccccccccccceeecccccc----cCCccccccCcCCceEEecCCcCCCCCChhhhc
Q 039419 174 CQSLLVVGLADTKVAGS----LPASLGKLSKLQSLSVYTTMLS----GEIPPQIGNCSELVDLFLYENDLSGSLPRELGK 245 (1035)
Q Consensus 174 l~~L~~L~l~~~~~~~~----~p~~l~~l~~L~~L~l~~n~l~----~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~ 245 (1035)
+++|++|++++|.+.+. ++..+..+++|++|++++|.++ +.++..+.++++|+.|+|++|.+.+ ++..+..
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 33444444444444333 2333445566666666666654 2233344556666666666666663 5556666
Q ss_pred ccchhHhhccccccc---ccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCC-CcccCCCcc
Q 039419 246 LQKLEKMLLWQNNFD---GAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIP-PVLSNATSL 321 (1035)
Q Consensus 246 l~~L~~L~l~~n~l~---~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L 321 (1035)
+++|++|++++.... ...+..+..+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 666666666543222 233445666677777777765443 456666677777777777777653322 234666777
Q ss_pred ceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccC-----------cCCCCCCC-CCcccCcccceEecccccc
Q 039419 322 LQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSH-----------NALTGSLH-PGLFQLQNLTKLLLISNGI 389 (1035)
Q Consensus 322 ~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~-----------N~l~~~~~-~~~~~l~~L~~L~L~~N~i 389 (1035)
++|+++ |.+... .++..+..+++|++|++++ |.++.... ..+..+++|++|+++.|.+
T Consensus 321 ~~L~L~-~~~~~~---------~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l 390 (592)
T 3ogk_B 321 EVLETR-NVIGDR---------GLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDI 390 (592)
T ss_dssp CEEEEE-GGGHHH---------HHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCC
T ss_pred CEEecc-CccCHH---------HHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCc
Confidence 777776 444321 1122334566777777773 44442211 1123466677777766666
Q ss_pred ccCCCCCCCCCCcceeEeeeccCCCCccceeecC----CCccCCC-----CcccccCCCCccEEEcCCCc--cCCCCchh
Q 039419 390 SGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLS----NNTLGGT-----LPSSLASLTRLQVLDISVNQ--FVGLIPES 458 (1035)
Q Consensus 390 ~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~----~N~l~~~-----~~~~l~~l~~L~~L~Ls~N~--l~~~~~~~ 458 (1035)
++..+..++. .+++|+.|+|+ .|.+++. ++..+.++++|+.|++++|. +++.....
T Consensus 391 ~~~~~~~l~~-------------~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 391 TNESLESIGT-------------YLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp CHHHHHHHHH-------------HCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred cHHHHHHHHh-------------hCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 5432222111 13456666664 5556543 22235556677777776432 44333333
Q ss_pred cc-CccccchhhccCCcccc-cCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCc
Q 039419 459 FG-QLASLNRLILSKNSFSG-AIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALN 536 (1035)
Q Consensus 459 ~~-~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~ 536 (1035)
+. .+++|+.|++++|++++ .++..+..+++|++|+|++|.+++..... .+..++
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~------------------------~~~~l~ 513 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAA------------------------AVTKLP 513 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHH------------------------HHHHCS
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHH------------------------HHHhcC
Confidence 32 35667777777776654 23344456667777777777665322221 223456
Q ss_pred cccEEeccCCcccCcc--ccccccCCCcEEeccCC
Q 039419 537 KLSILDLSHNKLGGDL--LALSGLDNLVSLNVSYN 569 (1035)
Q Consensus 537 ~L~~L~L~~N~l~~~~--~~~~~l~~L~~L~ls~N 569 (1035)
+|++|+|++|+++... .....+|.|....+..+
T Consensus 514 ~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 514 SLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp SCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred ccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 6777777777765532 12234565555555444
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=4.3e-27 Score=275.19 Aligned_cols=227 Identities=23% Similarity=0.218 Sum_probs=158.2
Q ss_pred chhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccc
Q 039419 248 KLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLD 327 (1035)
Q Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 327 (1035)
+|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|+...+..|.++++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 44555555555555555555555555555555555555555555555555556665555555555555555566666665
Q ss_pred cchhhhhhhhccccCCCCCcCCCCCCCCcEEeccC-cCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeE
Q 039419 328 TNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSH-NALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRL 406 (1035)
Q Consensus 328 ~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 406 (1035)
+|+|+.+ .+..|.++++|+.|+|++ |.+....+..|..+++|++|+|++|++++. |
T Consensus 156 ~N~l~~~----------~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~------------ 212 (452)
T 3zyi_A 156 NNPIESI----------PSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P------------ 212 (452)
T ss_dssp SCCCCEE----------CTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C------------
T ss_pred CCCccee----------CHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c------------
Confidence 5555422 123556666666666666 344433344566677777777777777643 2
Q ss_pred eeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCC
Q 039419 407 RLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRC 486 (1035)
Q Consensus 407 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 486 (1035)
.+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+++++.+..|..+++|+.|+|++|+|++..+..|..+
T Consensus 213 ---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 213 ---NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp ---CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred ---cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 13455778899999999998888899999999999999999998888899999999999999999998888888999
Q ss_pred CCCcEEEcCCCcCc
Q 039419 487 ESLQSLDLSSNKLS 500 (1035)
Q Consensus 487 ~~L~~L~Ls~N~l~ 500 (1035)
++|+.|+|++|.+.
T Consensus 290 ~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 290 RYLVELHLHHNPWN 303 (452)
T ss_dssp TTCCEEECCSSCEE
T ss_pred cCCCEEEccCCCcC
Confidence 99999999999886
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=5.5e-27 Score=273.29 Aligned_cols=227 Identities=22% Similarity=0.236 Sum_probs=142.4
Q ss_pred chhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccc
Q 039419 248 KLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLD 327 (1035)
Q Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 327 (1035)
+++.|+|++|++.+..+..|.++++|+.|+|++|.|++..+..|.++++|++|+|++|+|+.+.+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 33444444444444444444444555555555555544444445555555555555555544444445555555555555
Q ss_pred cchhhhhhhhccccCCCCCcCCCCCCCCcEEeccC-cCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeE
Q 039419 328 TNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSH-NALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRL 406 (1035)
Q Consensus 328 ~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 406 (1035)
+|+|+.+ .+..|..+++|++|+|++ |.+....+..|..+++|++|+|++|+++.+ |
T Consensus 145 ~N~i~~~----------~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~------------ 201 (440)
T 3zyj_A 145 NNPIESI----------PSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P------------ 201 (440)
T ss_dssp SCCCCEE----------CTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C------------
T ss_pred CCccccc----------CHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c------------
Confidence 5544422 123455555666666665 333333333555666666666666666532 2
Q ss_pred eeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCC
Q 039419 407 RLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRC 486 (1035)
Q Consensus 407 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 486 (1035)
.+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..|..+
T Consensus 202 ---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 202 ---NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp ---CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred ---ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 13445668888888888887778888888888888888888888888888888888888888888887777778888
Q ss_pred CCCcEEEcCCCcCc
Q 039419 487 ESLQSLDLSSNKLS 500 (1035)
Q Consensus 487 ~~L~~L~Ls~N~l~ 500 (1035)
++|+.|+|++|.+.
T Consensus 279 ~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 279 HHLERIHLHHNPWN 292 (440)
T ss_dssp TTCCEEECCSSCEE
T ss_pred cCCCEEEcCCCCcc
Confidence 89999999999886
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=4.6e-28 Score=290.27 Aligned_cols=297 Identities=26% Similarity=0.309 Sum_probs=156.5
Q ss_pred ccCCCCCCCCCCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCC
Q 039419 7 ALSNWNPSDSNPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVS 86 (1035)
Q Consensus 7 ~l~~w~~~~~~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls 86 (1035)
..+.|.... +||.|+|..|.-... ..+....++.|++++|+++ .+|..+. ++|++|+|+
T Consensus 11 ~w~~W~~~~-~~~~~~~r~~~~~~~-----------------~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~ 69 (622)
T 3g06_A 11 VWSAWRRAA-PAEESRGRAAVVQKM-----------------RACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIP 69 (622)
T ss_dssp HHHHHHHTC-CGGGHHHHHHHHHHH-----------------HHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEEC
T ss_pred HHHHHHhcC-CcchhccccccCccc-----------------ccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEec
Confidence 456787654 689998865421000 0001122455555555555 4555444 455555555
Q ss_pred CCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCC
Q 039419 87 SNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGK 166 (1035)
Q Consensus 87 ~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~ 166 (1035)
+|+++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|++|.++ .+|. .+++|+.|++++|+ ...
T Consensus 70 ~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~N~--l~~ 135 (622)
T 3g06_A 70 DNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFGNQ--LTS 135 (622)
T ss_dssp SCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCSSC--CSC
T ss_pred CCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCCCC--CCc
Confidence 55555 4443 3455555555555555 3443 4455555555555554 2333 33444444444443 111
Q ss_pred CCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcc
Q 039419 167 IPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKL 246 (1035)
Q Consensus 167 ~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l 246 (1035)
+|.. +++|++|++++|.++ .+|. .+.+|+.|++++|.+++ +| ..+
T Consensus 136 lp~~---------------------------l~~L~~L~Ls~N~l~-~l~~---~~~~L~~L~L~~N~l~~-l~---~~~ 180 (622)
T 3g06_A 136 LPVL---------------------------PPGLQELSVSDNQLA-SLPA---LPSELCKLWAYNNQLTS-LP---MLP 180 (622)
T ss_dssp CCCC---------------------------CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSC-CC---CCC
T ss_pred CCCC---------------------------CCCCCEEECcCCcCC-CcCC---ccCCCCEEECCCCCCCC-Cc---ccC
Confidence 2211 133444444444443 2222 12344445555555542 33 223
Q ss_pred cchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceecc
Q 039419 247 QKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQL 326 (1035)
Q Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 326 (1035)
++|+.|++++|++++ +|.. +++|+.|++++|.|+. +|.. +++|+.|+|++|+|++ +| ..+++|+.|+|
T Consensus 181 ~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~L 248 (622)
T 3g06_A 181 SGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMV 248 (622)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEEC
T ss_pred CCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEEC
Confidence 445555555555553 3321 3566666666666663 3322 3566777777776664 33 34466777777
Q ss_pred ccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCC
Q 039419 327 DTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNC 400 (1035)
Q Consensus 327 ~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l 400 (1035)
++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++..|..+..+
T Consensus 249 s~N~L~~-----------lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 249 SGNRLTS-----------LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp CSSCCSC-----------CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CCCCCCc-----------CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 7776652 233 4567778888888887 556777778888888888888877666554433
No 310
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=4.9e-27 Score=261.73 Aligned_cols=237 Identities=20% Similarity=0.250 Sum_probs=200.6
Q ss_pred CCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceee
Q 039419 77 CTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIR 156 (1035)
Q Consensus 77 l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 156 (1035)
.+++++|+|++|+++ .+|..++++++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467888888888888 88888888888888888888888 78888888888888888888887 6676666666666666
Q ss_pred cCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCC
Q 039419 157 AGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLS 236 (1035)
Q Consensus 157 l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 236 (1035)
+++|+ +.+.+|..++.. .++..+.++++|+.|+|++|.++
T Consensus 157 L~~n~-------------------------~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~ 196 (328)
T 4fcg_A 157 IRACP-------------------------ELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR 196 (328)
T ss_dssp EEEET-------------------------TCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC
T ss_pred CCCCC-------------------------CccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC
Confidence 65543 334555544431 23345677999999999999999
Q ss_pred CCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCccc
Q 039419 237 GSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLS 316 (1035)
Q Consensus 237 ~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 316 (1035)
.+|..++.+++|++|++++|++.+ +|..+..+++|++|+|++|.+.+.+|..|+++++|++|+|++|++.+.+|..|.
T Consensus 197 -~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~ 274 (328)
T 4fcg_A 197 -SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIH 274 (328)
T ss_dssp -CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGG
T ss_pred -cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhh
Confidence 889999999999999999999995 677899999999999999999999999999999999999999999999999999
Q ss_pred CCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCC
Q 039419 317 NATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGS 368 (1035)
Q Consensus 317 ~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 368 (1035)
++++|++|+|++|++. +.+|..+.++++|+.+++..|.+...
T Consensus 275 ~l~~L~~L~L~~n~~~----------~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 275 RLTQLEKLDLRGCVNL----------SRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp GCTTCCEEECTTCTTC----------CCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred cCCCCCEEeCCCCCch----------hhccHHHhhccCceEEeCCHHHHHHH
Confidence 9999999999998654 68999999999999999999988643
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1.2e-26 Score=253.72 Aligned_cols=253 Identities=24% Similarity=0.245 Sum_probs=148.5
Q ss_pred cEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCC
Q 039419 274 KTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCR 353 (1035)
Q Consensus 274 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~ 353 (1035)
+.++++++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|+|+. ..|..|..++
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~----------~~~~~~~~l~ 80 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR----------IDAAAFTGLA 80 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCE----------ECTTTTTTCT
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccce----------eCHhhcCCcc
Confidence 45666666665 334322 2456666666666665555555555566666665555542 1234566666
Q ss_pred CCcEEeccCcC-CCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCc
Q 039419 354 SLEAVDLSHNA-LTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLP 432 (1035)
Q Consensus 354 ~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~ 432 (1035)
+|++|+|++|. ++...+..|..+++|++|++++|++++..|..+. ++++|++|+|++|++++..+
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--------------~l~~L~~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFR--------------GLAALQYLYLQDNALQALPD 146 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT--------------TCTTCCEEECCSSCCCCCCT
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhh--------------CCcCCCEEECCCCcccccCH
Confidence 66666666665 5544455566666666666666666655444333 23446666666666665555
Q ss_pred ccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhcc
Q 039419 433 SSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEG 512 (1035)
Q Consensus 433 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 512 (1035)
..|..+++|++|+|++|+++++.+..|..+++|+.|++++|++++..|..|..+++|++|+|++|++++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------- 215 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA----------- 215 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC-----------
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCc-----------
Confidence 556666666666666666666555556666666666666666666666666666666666666666652
Q ss_pred CcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcccCCCh
Q 039419 513 LDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGYLPDS 578 (1035)
Q Consensus 513 l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~ 578 (1035)
..+..+..+++|++|+|++|++.++....+-+..|+.+..+.|.+.+..|..
T Consensus 216 --------------~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 216 --------------LPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp --------------CCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGG
T ss_pred --------------CCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchH
Confidence 2223344556677777777777665443333334555556666666665543
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=6.5e-27 Score=255.98 Aligned_cols=255 Identities=22% Similarity=0.239 Sum_probs=145.3
Q ss_pred cceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCc
Q 039419 202 QSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLN 281 (1035)
Q Consensus 202 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 281 (1035)
++++.+++.++ .+|..+ .++|+.|+|++|.+++..+..|..+++|++|++++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 34455555554 344433 345666666666666555555666666666666666666555666666666666666666
Q ss_pred c-CCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEec
Q 039419 282 F-FSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDL 360 (1035)
Q Consensus 282 ~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~L 360 (1035)
. ++...+..|..+++|++|++++|++.+..+..|.++++|++|++++|+|+.+ .+..|..+++|++|+|
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----------~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQAL----------PDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC----------CTTTTTTCTTCCEEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccccc----------CHhHhccCCCccEEEC
Confidence 5 5555556666666666666666666655555566666666666666555421 2234556666666666
Q ss_pred cCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCC
Q 039419 361 SHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTR 440 (1035)
Q Consensus 361 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 440 (1035)
++|++++..+..|..+++|++|++++|++++..|..+.. +++|++|+|++|++++..+..+..+++
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--------------l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRD--------------LGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT--------------CTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHhHccC--------------cccccEeeCCCCcCCcCCHHHcccCcc
Confidence 666666444445556666666666666666555544433 344666666666666555555666666
Q ss_pred ccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccC
Q 039419 441 LQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLG 484 (1035)
Q Consensus 441 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 484 (1035)
|++|+|++|++....+.. .-...++.+..+.|.+....|..+.
T Consensus 227 L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred cCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhC
Confidence 666666666665332211 1123344445555555555554443
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=1.6e-26 Score=269.28 Aligned_cols=246 Identities=23% Similarity=0.245 Sum_probs=181.9
Q ss_pred cceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCc
Q 039419 202 QSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLN 281 (1035)
Q Consensus 202 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 281 (1035)
..++..++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++.+..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 44555555555 5555543 46777777777777666667777777777777777777666677777777777777777
Q ss_pred cCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccc-hhhhhhhhccccCCCCCcCCCCCCCCcEEec
Q 039419 282 FFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTN-QISVFFAWQNKLEGSIPSTLANCRSLEAVDL 360 (1035)
Q Consensus 282 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~L 360 (1035)
+|++..+..|..+++|++|+|++|+|....+..|.++++|++|+|++| .+.. ..+..|.++++|++|+|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~----------i~~~~~~~l~~L~~L~L 192 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY----------ISEGAFEGLSNLRYLNL 192 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCE----------ECTTTTTTCSSCCEEEC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcce----------eCcchhhcccccCeecC
Confidence 777666667777777888888877777766777777778888887773 3332 22346777888888888
Q ss_pred cCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCC
Q 039419 361 SHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTR 440 (1035)
Q Consensus 361 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 440 (1035)
++|.++. +| .+..+++|++|+|++|+|++..|..|. ++++|+.|+|++|+|++..+..|..+++
T Consensus 193 ~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~--------------~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 256 (440)
T 3zyj_A 193 AMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQ--------------GLMHLQKLWMIQSQIQVIERNAFDNLQS 256 (440)
T ss_dssp TTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTT--------------TCTTCCEEECTTCCCCEECTTSSTTCTT
T ss_pred CCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhc--------------cCccCCEEECCCCceeEEChhhhcCCCC
Confidence 8888873 33 467788888888888888877666554 3456888888888888888888888888
Q ss_pred ccEEEcCCCccCCCCchhccCccccchhhccCCccc
Q 039419 441 LQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFS 476 (1035)
Q Consensus 441 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 476 (1035)
|+.|+|++|+|+++.+..|..+++|+.|+|++|.+.
T Consensus 257 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 257 LVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 888888888888888888888888888888888875
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=1.6e-26 Score=270.36 Aligned_cols=246 Identities=23% Similarity=0.274 Sum_probs=176.5
Q ss_pred cceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCc
Q 039419 202 QSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLN 281 (1035)
Q Consensus 202 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 281 (1035)
..++.+++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|++.+..+..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 34455555555 4554443 46677777777777666666777777777777777777666677777777777777777
Q ss_pred cCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceecccc-chhhhhhhhccccCCCCCcCCCCCCCCcEEec
Q 039419 282 FFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDT-NQISVFFAWQNKLEGSIPSTLANCRSLEAVDL 360 (1035)
Q Consensus 282 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~L 360 (1035)
+|++..+..|.++++|++|+|++|+|..+.+..|.++++|++|+|++ |.++.+ .+..|.++++|++|+|
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i----------~~~~~~~l~~L~~L~L 203 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYI----------SEGAFEGLFNLKYLNL 203 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEE----------CTTTTTTCTTCCEEEC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCcccc----------ChhhccCCCCCCEEEC
Confidence 77766666677777777777777777766666777777777777776 333322 2245777788888888
Q ss_pred cCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCC
Q 039419 361 SHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTR 440 (1035)
Q Consensus 361 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 440 (1035)
++|.+++. +.+..+++|++|+|++|+|++..|..| .++++|++|+|++|++++..+..|..+++
T Consensus 204 ~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~--------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 204 GMCNIKDM--PNLTPLVGLEELEMSGNHFPEIRPGSF--------------HGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp TTSCCSSC--CCCTTCTTCCEEECTTSCCSEECGGGG--------------TTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CCCccccc--ccccccccccEEECcCCcCcccCcccc--------------cCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 88888743 346777888888888888876655544 44566888888888888777888888888
Q ss_pred ccEEEcCCCccCCCCchhccCccccchhhccCCccc
Q 039419 441 LQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFS 476 (1035)
Q Consensus 441 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 476 (1035)
|+.|+|++|+|+++++..|..+++|+.|+|++|.+.
T Consensus 268 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 888888888888877777888888888888888775
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.8e-27 Score=262.23 Aligned_cols=250 Identities=17% Similarity=0.153 Sum_probs=166.6
Q ss_pred hhhccccccceEecccCCCCCCchhhhhhccccceeccccccC-CCCchhhc-------cccccceeecCCCcccCCCCC
Q 039419 97 SIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLS-GNLPVELG-------KLVNLEVIRAGGNKDIAGKIP 168 (1035)
Q Consensus 97 ~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~-~~~p~~l~-------~l~~L~~L~l~~n~~~~~~~~ 168 (1035)
.++.+++|++|++++|.+ .+|..+... |++|+|++|.+. ..+|..+. ++++|++|++++|
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n-------- 105 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENL-------- 105 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEE--------
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCC--------
Confidence 356677888888888888 577777665 888888888873 34555544 4555555555544
Q ss_pred CcCCCccceEEEEeccccccccCcccc--cccccccceeecccccccCCccccccC-----cCCceEEecCCcCCCCCCh
Q 039419 169 YEIGDCQSLLVVGLADTKVAGSLPASL--GKLSKLQSLSVYTTMLSGEIPPQIGNC-----SELVDLFLYENDLSGSLPR 241 (1035)
Q Consensus 169 ~~~~~l~~L~~L~l~~~~~~~~~p~~l--~~l~~L~~L~l~~n~l~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~~~ 241 (1035)
++++..|..+ +.+++|++|++++|.+++. |..+..+ ++|++|+|++|++++..|.
T Consensus 106 -----------------~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~ 167 (312)
T 1wwl_A 106 -----------------EVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCE 167 (312)
T ss_dssp -----------------BCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTT
T ss_pred -----------------cccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHH
Confidence 4444455544 5566666666666666544 5555555 6666666666666665556
Q ss_pred hhhcccchhHhhccccccccc--CCccc--cCCCCCcEEEccCccCCCC---CCccccCCCCCcEEEccCCccccCCC-C
Q 039419 242 ELGKLQKLEKMLLWQNNFDGA--IPEEI--GNCKSLKTIDLSLNFFSGS---LPQSFGNLSSLEELMLSNNNISGSIP-P 313 (1035)
Q Consensus 242 ~l~~l~~L~~L~l~~n~l~~~--~p~~~--~~l~~L~~L~L~~n~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~-~ 313 (1035)
.|+.+++|++|++++|++.+. .|..+ ..+++|++|+|++|+|++. ....+.++++|++|+|++|++++..| .
T Consensus 168 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 247 (312)
T 1wwl_A 168 QVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAP 247 (312)
T ss_dssp TCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCS
T ss_pred HhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchh
Confidence 666666666666666665543 23333 6777788888888877731 12334567788888888888876654 4
Q ss_pred cccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEecccccccc
Q 039419 314 VLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISG 391 (1035)
Q Consensus 314 ~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 391 (1035)
.+..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|+|++
T Consensus 248 ~~~~l~~L~~L~Ls~N~l~-----------~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 248 SCDWPSQLNSLNLSFTGLK-----------QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCCCTTCCEEECTTSCCS-----------SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhhhcCCCCEEECCCCccC-----------hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5666778888888887776 3455555 7888888888888865 44 7788888888888888874
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=1.3e-27 Score=264.78 Aligned_cols=252 Identities=21% Similarity=0.191 Sum_probs=208.5
Q ss_pred hhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCccccc----
Q 039419 121 ELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLG---- 196 (1035)
Q Consensus 121 ~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~---- 196 (1035)
.++..++|++|++++|.+ .+|..+... |++|++++|.. + ...+|..+.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l---------------~---------~~~~~~~~~~~~~ 89 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTV---------------R---------AARIPSRILFGAL 89 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEE---------------E---------EEECBHHHHHHHH
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--Hhhcccccccc---------------c---------CCCcCHHHHHHHH
Confidence 456778899999999998 778877765 88888877751 1 123444444
Q ss_pred ---ccccccceeecccccccCCcccc--ccCcCCceEEecCCcCCCCCChhhhcc-----cchhHhhcccccccccCCcc
Q 039419 197 ---KLSKLQSLSVYTTMLSGEIPPQI--GNCSELVDLFLYENDLSGSLPRELGKL-----QKLEKMLLWQNNFDGAIPEE 266 (1035)
Q Consensus 197 ---~l~~L~~L~l~~n~l~~~~p~~l--~~l~~L~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~l~~n~l~~~~p~~ 266 (1035)
++++|++|++++|.+++.+|..+ ..+++|++|+|++|.+++. |..++.+ ++|++|++++|++.+..|..
T Consensus 90 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~ 168 (312)
T 1wwl_A 90 RVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ 168 (312)
T ss_dssp HHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTT
T ss_pred HhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHH
Confidence 78999999999999999999987 8999999999999999977 8889888 99999999999999888899
Q ss_pred ccCCCCCcEEEccCccCCCC--CCccc--cCCCCCcEEEccCCcccc---CCCCcccCCCccceeccccchhhhhhhhcc
Q 039419 267 IGNCKSLKTIDLSLNFFSGS--LPQSF--GNLSSLEELMLSNNNISG---SIPPVLSNATSLLQLQLDTNQISVFFAWQN 339 (1035)
Q Consensus 267 ~~~l~~L~~L~L~~n~l~~~--~~~~~--~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n 339 (1035)
|+.+++|++|+|++|++.+. .+..+ .++++|++|+|++|+|++ .....+.++++|++|+|++|+|+.
T Consensus 169 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~------ 242 (312)
T 1wwl_A 169 VRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD------ 242 (312)
T ss_dssp CCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCS------
T ss_pred hccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCc------
Confidence 99999999999999998754 23334 899999999999999983 223455688999999999998873
Q ss_pred ccCCCCC-cCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccc
Q 039419 340 KLEGSIP-STLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQ 418 (1035)
Q Consensus 340 ~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~ 418 (1035)
..| ..+..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +. .+++|+
T Consensus 243 ----~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~--------------~l~~L~ 299 (312)
T 1wwl_A 243 ----AAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PD--------------ELPQVG 299 (312)
T ss_dssp ----SCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TT--------------TSCEEE
T ss_pred ----ccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-Hh--------------hCCCCC
Confidence 232 45667899999999999999 6677766 8999999999999976 43 43 457799
Q ss_pred eeecCCCccCCC
Q 039419 419 MLNLSNNTLGGT 430 (1035)
Q Consensus 419 ~L~L~~N~l~~~ 430 (1035)
+|+|++|++++.
T Consensus 300 ~L~L~~N~l~~~ 311 (312)
T 1wwl_A 300 NLSLKGNPFLDS 311 (312)
T ss_dssp EEECTTCTTTCC
T ss_pred EEeccCCCCCCC
Confidence 999999999853
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=2e-25 Score=267.35 Aligned_cols=267 Identities=26% Similarity=0.326 Sum_probs=185.7
Q ss_pred eEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhccc
Q 039419 177 LLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQ 256 (1035)
Q Consensus 177 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~ 256 (1035)
++.|++++|+++ .+|..+. ++|++|++++|.++ .+|. .+++|+.|+|++|+++ .+|. .+++|++|++++
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcC
Confidence 344444444454 4444443 56666666666666 4554 4566777777777776 3443 556777777777
Q ss_pred ccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhh
Q 039419 257 NNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFA 336 (1035)
Q Consensus 257 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~ 336 (1035)
|++++ +|. .+++|+.|+|++|+|++ +|.. +++|++|+|++|+++++ |. .+.+|+.|++++|+|+.
T Consensus 111 N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~--- 175 (622)
T 3g06_A 111 NPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS--- 175 (622)
T ss_dssp CCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC---
T ss_pred CcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC---
Confidence 77764 343 45778888888888874 4432 37788888888887753 33 24667788888887763
Q ss_pred hccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCc
Q 039419 337 WQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQ 416 (1035)
Q Consensus 337 ~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~ 416 (1035)
+| ..+++|+.|+|++|.|++ +|.. +++|+.|++++|.|+.+ |.. +++
T Consensus 176 --------l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-~~~-----------------~~~ 222 (622)
T 3g06_A 176 --------LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-PAL-----------------PSG 222 (622)
T ss_dssp --------CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-CCC-----------------CTT
T ss_pred --------Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-CCC-----------------CCC
Confidence 33 345778888888888874 3332 47888888888888743 221 256
Q ss_pred cceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCC
Q 039419 417 LQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSS 496 (1035)
Q Consensus 417 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 496 (1035)
|++|+|++|+|++ +| ..+++|+.|+|++|+|+.+++ .+++|+.|+|++|+|+ .+|..|..+++|+.|+|++
T Consensus 223 L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 223 LKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp CCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCS
T ss_pred CCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecC
Confidence 8888999998885 44 455789999999999986543 5678889999999998 6678888999999999999
Q ss_pred CcCcCccchhhhhhc
Q 039419 497 NKLSGKIPVELFEIE 511 (1035)
Q Consensus 497 N~l~~~~p~~~~~~~ 511 (1035)
|++++.+|..+..+.
T Consensus 294 N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 294 NPLSERTLQALREIT 308 (622)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHhcc
Confidence 999887777666554
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.5e-27 Score=265.05 Aligned_cols=253 Identities=21% Similarity=0.187 Sum_probs=140.4
Q ss_pred hhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchh
Q 039419 252 MLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQI 331 (1035)
Q Consensus 252 L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i 331 (1035)
++++.+.+...+...+..+++|++|+|++|+|++..|..|.++++|++|+|++|++.+..+ |..+++|++|+|++|+|
T Consensus 15 ~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 15 EKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp ESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEE
T ss_pred eeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcc
Confidence 3555555554444555566778888888888877666777788888888888887775443 66666666666666665
Q ss_pred hhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeecc
Q 039419 332 SVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSF 411 (1035)
Q Consensus 332 ~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~ 411 (1035)
+.+ ...++|++|++++|++++..+.. +
T Consensus 93 ~~l---------------~~~~~L~~L~l~~n~l~~~~~~~---~----------------------------------- 119 (317)
T 3o53_A 93 QEL---------------LVGPSIETLHAANNNISRVSCSR---G----------------------------------- 119 (317)
T ss_dssp EEE---------------EECTTCCEEECCSSCCSEEEECC---C-----------------------------------
T ss_pred ccc---------------cCCCCcCEEECCCCccCCcCccc---c-----------------------------------
Confidence 422 12255566666666555322211 2
Q ss_pred CCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhcc-CccccchhhccCCcccccCccccCCCCCCc
Q 039419 412 GNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFG-QLASLNRLILSKNSFSGAIPSSLGRCESLQ 490 (1035)
Q Consensus 412 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 490 (1035)
++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+. .+++|++|+|++|+|++. +. ...+++|+
T Consensus 120 ---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~ 194 (317)
T 3o53_A 120 ---QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLK 194 (317)
T ss_dssp ---SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCC
T ss_pred ---CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCC
Confidence 3355555555555555555555556666666666666655444442 455666666666666533 22 22356666
Q ss_pred EEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccC--ccccccccCCCcEEecc
Q 039419 491 SLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGG--DLLALSGLDNLVSLNVS 567 (1035)
Q Consensus 491 ~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~l~~L~~L~ls 567 (1035)
+|+|++|+|+ .+|..+..+..+. .|+|++|+++ .+|..+..+++|+.|+|++|++.+ .+..+..+++|+.|+++
T Consensus 195 ~L~Ls~N~l~-~l~~~~~~l~~L~-~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 195 TLDLSSNKLA-FMGPEFQSAAGVT-WISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp EEECCSSCCC-EECGGGGGGTTCS-EEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred EEECCCCcCC-cchhhhcccCccc-EEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 6666666665 2333322222211 2333333333 223344555666666666666652 23445555555555555
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2e-27 Score=264.07 Aligned_cols=268 Identities=20% Similarity=0.204 Sum_probs=184.4
Q ss_pred eEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhccc
Q 039419 177 LLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQ 256 (1035)
Q Consensus 177 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~ 256 (1035)
++..+++.+.+...+...+..+++|++|++++|.+++..|..|.++++|+.|+|++|.+++..+ |..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 5556666666665555556667778888888888876666777788888888888888775443 77777788888888
Q ss_pred ccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhh
Q 039419 257 NNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFA 336 (1035)
Q Consensus 257 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~ 336 (1035)
|++++.. ..++|++|++++|+|++..+. .+++|++|++++|++++..+..|..+++|++|+|++|+|+.+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-- 159 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV-- 159 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE--
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc--
Confidence 7777432 237788888888888754433 356788888888888777677777777788888877777643
Q ss_pred hccccCCCCCcCC-CCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCC
Q 039419 337 WQNKLEGSIPSTL-ANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCT 415 (1035)
Q Consensus 337 ~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~ 415 (1035)
.+..+ ..+++|++|+|++|.+++. + ....+++|++|+|++|+|++..+. |..++
T Consensus 160 --------~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~---------------~~~l~ 214 (317)
T 3o53_A 160 --------NFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPE---------------FQSAA 214 (317)
T ss_dssp --------EGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGG---------------GGGGT
T ss_pred --------cHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchhh---------------hcccC
Confidence 22333 3567788888888877744 2 223477777777777777754332 33446
Q ss_pred ccceeecCCCccCCCCcccccCCCCccEEEcCCCccC-CCCchhccCccccchhhccC-CcccccCccc
Q 039419 416 QLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFV-GLIPESFGQLASLNRLILSK-NSFSGAIPSS 482 (1035)
Q Consensus 416 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~ 482 (1035)
+|++|+|++|+|+ .+|..+..+++|+.|++++|++. +.++..+..+++|+.|++++ +.+++..|..
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 6777777777777 45666777777888888888777 56667777777777777774 3455554443
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=2.1e-26 Score=270.77 Aligned_cols=218 Identities=24% Similarity=0.224 Sum_probs=137.8
Q ss_pred CCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcC
Q 039419 269 NCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPST 348 (1035)
Q Consensus 269 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~ 348 (1035)
.+++|+.|+|++|.|++..|..|+++++|++|+|++|.+++..| |..+++|++|+|++|+|+.+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-------------- 95 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-------------- 95 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE--------------
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC--------------
Confidence 34578888888888887777788888888888888888875544 66666666666666665422
Q ss_pred CCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccC
Q 039419 349 LANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLG 428 (1035)
Q Consensus 349 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~ 428 (1035)
...++|+.|++++|.|++..+ . .+++|+.|+|++|+|+
T Consensus 96 -~~~~~L~~L~L~~N~l~~~~~------------------------~-----------------~l~~L~~L~L~~N~l~ 133 (487)
T 3oja_A 96 -LVGPSIETLHAANNNISRVSC------------------------S-----------------RGQGKKNIYLANNKIT 133 (487)
T ss_dssp -EECTTCCEEECCSSCCCCEEE------------------------C-----------------CCSSCEEEECCSSCCC
T ss_pred -CCCCCcCEEECcCCcCCCCCc------------------------c-----------------ccCCCCEEECCCCCCC
Confidence 112455555555555543222 1 1244666666777766
Q ss_pred CCCcccccCCCCccEEEcCCCccCCCCchhcc-CccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhh
Q 039419 429 GTLPSSLASLTRLQVLDISVNQFVGLIPESFG-QLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVEL 507 (1035)
Q Consensus 429 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 507 (1035)
+..|..|..+++|+.|+|++|+|++.+|..|. .+++|+.|+|++|.|++..+ +..+++|++|+|++|.|++ +|..
T Consensus 134 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~- 209 (487)
T 3oja_A 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPE- 209 (487)
T ss_dssp SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGG-
T ss_pred CCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHh-
Confidence 66666677777777777777777766666665 56777777777777765422 3346777777777777763 2222
Q ss_pred hhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCc
Q 039419 508 FEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFT 572 (1035)
Q Consensus 508 ~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~ 572 (1035)
+..+++|+.|+|++|+|++.+..+..+++|+.|++++|++.
T Consensus 210 ------------------------~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 210 ------------------------FQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp ------------------------GGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBC
T ss_pred ------------------------HcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCc
Confidence 33445555666666666555555555566666666666665
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=8.9e-30 Score=309.72 Aligned_cols=439 Identities=16% Similarity=0.171 Sum_probs=233.8
Q ss_pred CCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCC---CCCCCC------------CCCCCCc
Q 039419 17 NPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTG---PISPDL------------GDCTQLT 81 (1035)
Q Consensus 17 ~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~---~~~~~~------------~~l~~L~ 81 (1035)
-|++|+++... ....+++...... .....+..+++|++|+|+++.... ..|..+ ..+++|+
T Consensus 33 vck~W~~~~~~---~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 33 VCKSWYEIERW---CRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp SCHHHHHHHHH---HCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHHhhhh---hceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 46789998322 2234555433211 112235677889999999975321 122221 2466788
Q ss_pred eeeCCCCCCCCCCChhhh-ccccccceEeccc-CCCCC-CchhhhhhccccceeccccccCCCCchhhc----cccccce
Q 039419 82 TIDVSSNSLVGGVPSSIG-KLINLQDLILNSN-QLTGE-IPKELGACIKLKNLLLFDNYLSGNLPVELG----KLVNLEV 154 (1035)
Q Consensus 82 ~L~ls~n~l~~~~p~~i~-~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~----~l~~L~~ 154 (1035)
+|+|++|.+++..+..+. .+++|++|+|++| .+++. ++..+..+++|++|+|++|.+++..+..+. .+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 888888877766666665 5778888888877 45432 334445677888888888777655444443 4446677
Q ss_pred eecCCCc-ccCCC-CCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecC
Q 039419 155 IRAGGNK-DIAGK-IPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYE 232 (1035)
Q Consensus 155 L~l~~n~-~~~~~-~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~ 232 (1035)
|++++|. .+... +..-+..+++|+.|++++|...+.++..+..+++|++|++..+... +..
T Consensus 189 L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~-----------------~~~ 251 (594)
T 2p1m_B 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAE-----------------VRP 251 (594)
T ss_dssp EECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCC-----------------CCH
T ss_pred EEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCc-----------------cch
Confidence 7666663 00000 0011122345555555544222224444444455555543222100 111
Q ss_pred CcCCCCCChhhhcccchhHh-hcccccccccCCccccCCCCCcEEEccCccCCCCCCc-cccCCCCCcEEEccCCccccC
Q 039419 233 NDLSGSLPRELGKLQKLEKM-LLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQ-SFGNLSSLEELMLSNNNISGS 310 (1035)
Q Consensus 233 n~l~~~~~~~l~~l~~L~~L-~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~ 310 (1035)
|.+. .++..+.++++|+.| .+.+... +.++..+..+++|+.|+|++|.+++.... .+..+++|++|++++| +...
T Consensus 252 ~~~~-~l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~ 328 (594)
T 2p1m_B 252 DVYS-GLSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDA 328 (594)
T ss_dssp HHHH-HHHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHH
T ss_pred hhHH-HHHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHH
Confidence 1111 122233444444444 2222211 12333344455666666666655432111 2345566666666655 3211
Q ss_pred -CCCcccCCCccceeccc---------cchhhhhhhhccccCCCCCcCC-CCCCCCcEEeccCcCCCCCCCCCcc-cCcc
Q 039419 311 -IPPVLSNATSLLQLQLD---------TNQISVFFAWQNKLEGSIPSTL-ANCRSLEAVDLSHNALTGSLHPGLF-QLQN 378 (1035)
Q Consensus 311 -~~~~~~~l~~L~~L~L~---------~N~i~~l~~~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~ 378 (1035)
.+.....+++|++|++. .|.++.... ..+ ..+++|+.|+++.|.+++.....+. .+++
T Consensus 329 ~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l----------~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~ 398 (594)
T 2p1m_B 329 GLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGL----------VSVSMGCPKLESVLYFCRQMTNAALITIARNRPN 398 (594)
T ss_dssp HHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHH----------HHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTT
T ss_pred HHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHH----------HHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCC
Confidence 11122235556666552 233332111 112 2367777777777777644333343 4677
Q ss_pred cceEecc--c----cccccCCCC-CCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccC-CCCccEEEcCCCc
Q 039419 379 LTKLLLI--S----NGISGLIPP-EIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLAS-LTRLQVLDISVNQ 450 (1035)
Q Consensus 379 L~~L~L~--~----N~i~~~~~~-~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-l~~L~~L~Ls~N~ 450 (1035)
|+.|+++ + |.+++...+ .+. ..+.++++|+.|+|++ .+++..+..+.. +++|+.|+|++|.
T Consensus 399 L~~L~L~~~~~~~~~~l~~~~~~~~~~----------~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~ 467 (594)
T 2p1m_B 399 MTRFRLCIIEPKAPDYLTLEPLDIGFG----------AIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAG 467 (594)
T ss_dssp CCEEEEEESSTTCCCTTTCCCTHHHHH----------HHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCC
T ss_pred cceeEeecccCCCcccccCCchhhHHH----------HHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCC
Confidence 8888887 3 344321100 000 0134566788888876 666544445554 7788889998888
Q ss_pred cCCCCchhc-cCccccchhhccCCcccccCcc-ccCCCCCCcEEEcCCCcCc
Q 039419 451 FVGLIPESF-GQLASLNRLILSKNSFSGAIPS-SLGRCESLQSLDLSSNKLS 500 (1035)
Q Consensus 451 l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~ 500 (1035)
+++.....+ ..+++|+.|+|++|.+++.... .+..+++|++|+|++|+++
T Consensus 468 i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 468 DSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp SSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred CcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 875544444 5678888899998888644333 3445788999999999885
No 322
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.1e-25 Score=266.60 Aligned_cols=194 Identities=14% Similarity=0.150 Sum_probs=148.9
Q ss_pred ccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEeEEEcC
Q 039419 689 VEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLGCCWNR 768 (1035)
Q Consensus 689 ~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 768 (1035)
...+.||+|+||+||+|+.. ++.+++|+...+....... ......+++.+|++++++++||||+++..++...
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~------~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~ 411 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERL------DENIRKSRTAREARYLALVKDFGIPAPYIFDVDL 411 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHH------HHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhh------hhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC
Confidence 45678999999999999554 7889999876543221100 0011246789999999999999999666666677
Q ss_pred CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeeccCc
Q 039419 769 NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLA 848 (1035)
Q Consensus 769 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a 848 (1035)
+..|+||||++|++|.++++. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||++
T Consensus 412 ~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla 476 (540)
T 3en9_A 412 DNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLG 476 (540)
T ss_dssp TTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTC
T ss_pred CccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccC
Confidence 888999999999999999875 458999999999999999 9999999999999998 9999999999
Q ss_pred cccccCCccc-----cccccCCcccccCCccccc--CCCCccccchhHHHHHHHHHhCCCCCC
Q 039419 849 KLVVEGDFAR-----SSNTVAGSYGYIAPEYGYM--MKITEKSDVYSYGVVVLEVLTGKQPID 904 (1035)
Q Consensus 849 ~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGvvl~elltg~~P~~ 904 (1035)
+......... ......||+.|||||++.. ..|+...|+|+..+-..+-+.++.+|.
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 477 KISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred EECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 9775432111 1235679999999999876 567788999999999999888887763
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=2.5e-24 Score=233.19 Aligned_cols=217 Identities=22% Similarity=0.206 Sum_probs=167.0
Q ss_pred CCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCCh
Q 039419 17 NPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPS 96 (1035)
Q Consensus 17 ~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~ 96 (1035)
++|.|.|+.|.-.+.++.+++++++++ .+|..+. ++|++|+|++|++++..+..++.+++|++|+|++|+++...+.
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred ccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 689999999965555667889998888 4776665 6789999999999966666899999999999999999855455
Q ss_pred hhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccc
Q 039419 97 SIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQS 176 (1035)
Q Consensus 97 ~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 176 (1035)
.+..+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..++.+++|++|++++|. +....+..+..+++
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~ 158 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE-LQSLPKGVFDKLTS 158 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTT
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCc-CCccCHhHccCCcc
Confidence 56889999999999999986555667889999999999999986666778888888888888886 33333344667777
Q ss_pred eEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCC
Q 039419 177 LLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSG 237 (1035)
Q Consensus 177 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 237 (1035)
|+.|++++|.+.+..+..|..+++|++|++++|.+++..+..+..+++|+.|+|++|.+..
T Consensus 159 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 159 LKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 7777777777776666667777777777777777775444556667777777777776653
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=3.9e-28 Score=295.26 Aligned_cols=430 Identities=15% Similarity=0.146 Sum_probs=210.4
Q ss_pred CCCCCCCceeeCCCCCCC---CCCCh------------hhhccccccceEecccCCCCCCchhhh-hhccccceecccc-
Q 039419 74 LGDCTQLTTIDVSSNSLV---GGVPS------------SIGKLINLQDLILNSNQLTGEIPKELG-ACIKLKNLLLFDN- 136 (1035)
Q Consensus 74 ~~~l~~L~~L~ls~n~l~---~~~p~------------~i~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~l~~n- 136 (1035)
+..+++|++|+|++|... +..|. ....+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 62 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~ 141 (594)
T 2p1m_B 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCE 141 (594)
T ss_dssp HHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCE
T ss_pred HhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcC
Confidence 345677788888776421 11121 123556777777777777665555554 5677777777776
Q ss_pred ccCCC-CchhhccccccceeecCCCcccCCCCCCc----CCCccceEEEEecccc--cccc-Ccccccccccccceeecc
Q 039419 137 YLSGN-LPVELGKLVNLEVIRAGGNKDIAGKIPYE----IGDCQSLLVVGLADTK--VAGS-LPASLGKLSKLQSLSVYT 208 (1035)
Q Consensus 137 ~l~~~-~p~~l~~l~~L~~L~l~~n~~~~~~~~~~----~~~l~~L~~L~l~~~~--~~~~-~p~~l~~l~~L~~L~l~~ 208 (1035)
.+... ++..+.++++|++|++++|. +.+..+.. ...+++|+.|++++|. +... ++..+..+++|++|++++
T Consensus 142 ~~~~~~l~~~~~~~~~L~~L~L~~~~-i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 142 GFSTDGLAAIAATCRNLKELDLRESD-VDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEHHHHHHHHHHCTTCCEEECTTCE-EECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCHHHHHHHHHhCCCCCEEeCcCCc-cCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCC
Confidence 34322 33334466666777666664 22222111 1133344444444443 1100 111112234444444444
Q ss_pred c-ccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEE-EccCccCCCC
Q 039419 209 T-MLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTI-DLSLNFFSGS 286 (1035)
Q Consensus 209 n-~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L-~L~~n~l~~~ 286 (1035)
| .+. .++..+..+++|+.|+++.+... +..|.+.+ ++..+.++++|+.| .+.+.... .
T Consensus 221 ~~~~~-~l~~~~~~~~~L~~L~l~~~~~~-----------------~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~-~ 280 (594)
T 2p1m_B 221 AVPLE-KLATLLQRAPQLEELGTGGYTAE-----------------VRPDVYSG-LSVALSGCKELRCLSGFWDAVPA-Y 280 (594)
T ss_dssp TSCHH-HHHHHHHHCTTCSEEECSBCCCC-----------------CCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG-G
T ss_pred CCcHH-HHHHHHhcCCcceEcccccccCc-----------------cchhhHHH-HHHHHhcCCCcccccCCcccchh-h
Confidence 3 222 23333333444444443332210 22333443 34467788888888 44433322 3
Q ss_pred CCccccCCCCCcEEEccCCccccCC-CCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccC---
Q 039419 287 LPQSFGNLSSLEELMLSNNNISGSI-PPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSH--- 362 (1035)
Q Consensus 287 ~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~--- 362 (1035)
++..+..+++|++|+|++|.+++.. ...+..+++|++|++++| +.... ++.....+++|++|++++
T Consensus 281 l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~---------l~~l~~~~~~L~~L~L~~~~~ 350 (594)
T 2p1m_B 281 LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAG---------LEVLASTCKDLRELRVFPSEP 350 (594)
T ss_dssp GGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHH---------HHHHHHHCTTCCEEEEECSCT
T ss_pred HHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHH---------HHHHHHhCCCCCEEEEecCcc
Confidence 4444556788888888888865432 223456777888888777 43211 112223467777777743
Q ss_pred ------cCCCCCCCCCcc-cCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecC--C----CccCC
Q 039419 363 ------NALTGSLHPGLF-QLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLS--N----NTLGG 429 (1035)
Q Consensus 363 ------N~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~--~----N~l~~ 429 (1035)
+.+++.....+. .+++|++|.+..|.+++.....+. ..+++|+.|+|+ + |.+++
T Consensus 351 ~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~-------------~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 351 FVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIA-------------RNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHH-------------HHCTTCCEEEEEESSTTCCCTTTC
T ss_pred cccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHH-------------hhCCCcceeEeecccCCCcccccC
Confidence 233311111111 245566665555555432111110 123445555555 2 33332
Q ss_pred CC-----cccccCCCCccEEEcCCCccCCCCchhccC-ccccchhhccCCcccccCcccc-CCCCCCcEEEcCCCcCcCc
Q 039419 430 TL-----PSSLASLTRLQVLDISVNQFVGLIPESFGQ-LASLNRLILSKNSFSGAIPSSL-GRCESLQSLDLSSNKLSGK 502 (1035)
Q Consensus 430 ~~-----~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~ 502 (1035)
.. +..+..+++|+.|+|++ .+++.....+.. +++|+.|+|++|.+++.....+ ..+++|++|+|++|.++
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~-- 494 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG-- 494 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC--
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc--
Confidence 11 11133445555555544 333322222322 4445555555555543322222 33455555555555543
Q ss_pred cchhhhhhccCcceeeccCccCCCCCCc-cccCCccccEEeccCCcccCcc-ccc-cccCCCcEEeccCCcCcc
Q 039419 503 IPVELFEIEGLDISLNLSWNALSGAIPP-QISALNKLSILDLSHNKLGGDL-LAL-SGLDNLVSLNVSYNNFTG 573 (1035)
Q Consensus 503 ~p~~~~~~~~l~~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~-~~~-~~l~~L~~L~ls~N~l~~ 573 (1035)
+.... .+..+++|++|+|++|+++... ..+ ..+++|+...+..+....
T Consensus 495 -----------------------~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~~ 545 (594)
T 2p1m_B 495 -----------------------DKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPD 545 (594)
T ss_dssp -----------------------HHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCGG
T ss_pred -----------------------HHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCccc
Confidence 22221 2345789999999999984422 233 567888887777776544
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=4e-25 Score=259.87 Aligned_cols=223 Identities=21% Similarity=0.186 Sum_probs=175.2
Q ss_pred CCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCC
Q 039419 350 ANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGG 429 (1035)
Q Consensus 350 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~ 429 (1035)
..+++|++|+|++|.+++..|..|..+++|++|+|++|.|++..| |.++++|++|+|++|.|++
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~----------------l~~l~~L~~L~Ls~N~l~~ 94 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD----------------LESLSTLRTLDLNNNYVQE 94 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE----------------CTTCTTCCEEECCSSEEEE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc----------------cccCCCCCEEEecCCcCCC
Confidence 345578888888888887777778888888888888888775433 4455678888888888874
Q ss_pred CCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhh
Q 039419 430 TLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFE 509 (1035)
Q Consensus 430 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 509 (1035)
.. ..++|+.|++++|+|++..+.. +++|+.|+|++|.|++..|..|..+++|++|+|++|.|++.+|..++.
T Consensus 95 l~-----~~~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 166 (487)
T 3oja_A 95 LL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA 166 (487)
T ss_dssp EE-----ECTTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG
T ss_pred CC-----CCCCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh
Confidence 33 2378888888888888765543 467888888888888777778888888888888888888777777763
Q ss_pred hccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcccCCChhhhhccccccc
Q 039419 510 IEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGYLPDSKLFRQLSATEM 589 (1035)
Q Consensus 510 ~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~ 589 (1035)
....+..|+|++|.|++..+ +..+++|++|+|++|+|++.++.+..+++|+.|+|++|+|++.++....+..+..+++
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l 244 (487)
T 3oja_A 167 SSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDL 244 (487)
T ss_dssp GTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEEC
T ss_pred hCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEc
Confidence 33444578888888886632 3468999999999999999988899999999999999999987666566788899999
Q ss_pred cccccCCCC
Q 039419 590 AGNQGLCSR 598 (1035)
Q Consensus 590 ~~N~~~c~~ 598 (1035)
.+|++.|++
T Consensus 245 ~~N~l~c~~ 253 (487)
T 3oja_A 245 RGNGFHCGT 253 (487)
T ss_dssp TTCCBCHHH
T ss_pred CCCCCcCcc
Confidence 999999874
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=1.2e-23 Score=228.71 Aligned_cols=213 Identities=23% Similarity=0.257 Sum_probs=156.5
Q ss_pred CCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCc
Q 039419 353 RSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLP 432 (1035)
Q Consensus 353 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~ 432 (1035)
++|++|++++|.+++..+..|..+++|++|++++|++++..+..+. ++++|++|+|++|++++..+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--------------~l~~L~~L~L~~n~l~~~~~ 93 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ--------------SLSHLSTLILTGNPIQSLAL 93 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTT--------------TCTTCCEEECTTCCCCEECT
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHcc--------------CCcCCCEEECCCCccCccCh
Confidence 4567777777777655555666777777777777777655544433 34557777777777776666
Q ss_pred ccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCccccc-CccccCCCCCCcEEEcCCCcCcCccchhhhhhc
Q 039419 433 SSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGA-IPSSLGRCESLQSLDLSSNKLSGKIPVELFEIE 511 (1035)
Q Consensus 433 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 511 (1035)
..|.++++|++|++++|++.+..+..|..+++|++|++++|++++. +|..|..+++|++|+|++|++++..+..+..+.
T Consensus 94 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 173 (276)
T 2z62_A 94 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173 (276)
T ss_dssp TTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHH
T ss_pred hhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhh
Confidence 7777777888888888887777666777777888888888887753 477778888888888888888755455554444
Q ss_pred cCc---ceeeccCccCCCCCCccccCCccccEEeccCCcccCccc-cccccCCCcEEeccCCcCcccCCChhh
Q 039419 512 GLD---ISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLL-ALSGLDNLVSLNVSYNNFTGYLPDSKL 580 (1035)
Q Consensus 512 ~l~---~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~ls~N~l~~~~p~~~~ 580 (1035)
.+. ..|++++|.+++..+..+.. .+|++|+|++|++++.+. .|..+++|+.|++++|+|++.+|....
T Consensus 174 ~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~~ 245 (276)
T 2z62_A 174 QMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 245 (276)
T ss_dssp TCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTHH
T ss_pred hccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchHH
Confidence 332 26888888888776666655 489999999999998775 478899999999999999998876543
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=5.3e-24 Score=231.58 Aligned_cols=214 Identities=22% Similarity=0.225 Sum_probs=131.0
Q ss_pred CCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccC
Q 039419 214 EIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGN 293 (1035)
Q Consensus 214 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 293 (1035)
.+|..+. ++|+.|++++|.+++..+..|.++++|++|++++|++.+..+..|.++++|++|+|++|++++..+..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4454442 35667777777666555556666666666666666666555566667777777777777776666666777
Q ss_pred CCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCc
Q 039419 294 LSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGL 373 (1035)
Q Consensus 294 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 373 (1035)
+++|++|++++|++.+..+..|..+++|++|++++|+|+.+ .+|..+..+++|++|+|++|++++..+..+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---------~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF---------KLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC---------CCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee---------cCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 77777777777777665555566666666666666665421 245566666667777777776665555555
Q ss_pred ccCcccc----eEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCC
Q 039419 374 FQLQNLT----KLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVN 449 (1035)
Q Consensus 374 ~~l~~L~----~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N 449 (1035)
..+++|+ +|++++|++++..+..+.. .+|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 170 ~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~---------------~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N 234 (276)
T 2z62_A 170 RVLHQMPLLNLSLDLSLNPMNFIQPGAFKE---------------IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234 (276)
T ss_dssp HHHHTCTTCCEEEECCSSCCCEECTTSSCS---------------CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSS
T ss_pred hhhhhccccceeeecCCCcccccCccccCC---------------CcccEEECCCCceeecCHhHhcccccccEEEccCC
Confidence 5555555 5666666665444333221 24566666666666554445555666666666666
Q ss_pred ccCC
Q 039419 450 QFVG 453 (1035)
Q Consensus 450 ~l~~ 453 (1035)
++..
T Consensus 235 ~~~c 238 (276)
T 2z62_A 235 PWDC 238 (276)
T ss_dssp CBCC
T ss_pred cccc
Confidence 6553
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=1.2e-22 Score=220.04 Aligned_cols=203 Identities=24% Similarity=0.289 Sum_probs=154.0
Q ss_pred CCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCC
Q 039419 272 SLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLAN 351 (1035)
Q Consensus 272 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~ 351 (1035)
+++.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+|+.+ .+..|..
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i----------~~~~~~~ 83 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL----------PAGIFKE 83 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC----------CTTTTSS
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee----------ChhhhcC
Confidence 4566777777766 3444343 4667777777777666666677777777777777666532 2245677
Q ss_pred CCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCC
Q 039419 352 CRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTL 431 (1035)
Q Consensus 352 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~ 431 (1035)
+++|++|+|++|.++...+..|..+++|++|++++|++++..+..|. ++++|++|+|++|+|++..
T Consensus 84 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--------------~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFD--------------SLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTT--------------TCTTCCEEECCSSCCCCCC
T ss_pred CCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhC--------------cCcCCCEEECCCCcCCccC
Confidence 78888888888888766666777788888888888888776665543 4466888888999888777
Q ss_pred cccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcC
Q 039419 432 PSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSG 501 (1035)
Q Consensus 432 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 501 (1035)
+..|..+++|++|+|++|+++++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 7778889999999999999998888888889999999999999987777778889999999999999873
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=5.1e-23 Score=223.08 Aligned_cols=202 Identities=24% Similarity=0.238 Sum_probs=116.6
Q ss_pred cccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCcccee
Q 039419 245 KLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQL 324 (1035)
Q Consensus 245 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 324 (1035)
.+.++..+++..+.+.... .+..+++|+.|++++|.++. . ..+..+++|++|++++|++.+. ..+..+++|++|
T Consensus 17 ~~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 90 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYL 90 (272)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEE
T ss_pred hHHHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEE
Confidence 3556777888888776543 35678889999999998873 3 3478888888888888888753 245555555555
Q ss_pred ccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcce
Q 039419 325 QLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLI 404 (1035)
Q Consensus 325 ~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 404 (1035)
+|++|+|+. ..+..|..+++|++|+|++|++++..+..|..+++|++|++++|+++
T Consensus 91 ~L~~n~l~~----------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-------------- 146 (272)
T 3rfs_A 91 ILTGNQLQS----------LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-------------- 146 (272)
T ss_dssp ECTTSCCCC----------CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC--------------
T ss_pred ECCCCccCc----------cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccC--------------
Confidence 555555442 22334455555555555555555444444445555555555555554
Q ss_pred eEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccC
Q 039419 405 RLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLG 484 (1035)
Q Consensus 405 ~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 484 (1035)
+..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++..+..|.
T Consensus 147 ------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 202 (272)
T 3rfs_A 147 ------------------------SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFD 202 (272)
T ss_dssp ------------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ------------------------ccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHh
Confidence 44444444444555555555555444444444445555555555555444444445
Q ss_pred CCCCCcEEEcCCCcCc
Q 039419 485 RCESLQSLDLSSNKLS 500 (1035)
Q Consensus 485 ~l~~L~~L~Ls~N~l~ 500 (1035)
.+++|++|+|++|.+.
T Consensus 203 ~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 203 RLTSLQYIWLHDNPWD 218 (272)
T ss_dssp TCTTCCEEECCSSCBC
T ss_pred CCcCCCEEEccCCCcc
Confidence 5555555555555544
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=9.3e-23 Score=222.74 Aligned_cols=203 Identities=26% Similarity=0.248 Sum_probs=158.6
Q ss_pred ccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCC
Q 039419 267 IGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIP 346 (1035)
Q Consensus 267 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p 346 (1035)
+.++++++.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|+.+ +
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-----------~ 71 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-----------Q 71 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-----------E
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-----------c
Confidence 566777777777777777 3444443 5777788888877777777777777777888777777643 1
Q ss_pred cCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCc
Q 039419 347 STLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNT 426 (1035)
Q Consensus 347 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~ 426 (1035)
....+++|++|+|++|+|+ .+|..+..+++|++|++++|+|++..+..|. ++++|++|+|++|+
T Consensus 72 -~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~--------------~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 72 -VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALR--------------GLGELQELYLKGNE 135 (290)
T ss_dssp -CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTT--------------TCTTCCEEECTTSC
T ss_pred -CCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHc--------------CCCCCCEEECCCCC
Confidence 2267788888888888887 5667777888888888888888876665544 44668888888898
Q ss_pred cCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCc
Q 039419 427 LGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLS 500 (1035)
Q Consensus 427 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 500 (1035)
|++..+..|..+++|+.|+|++|+|+.+++..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 88777777888889999999999999887778888899999999999998 66777777888999999999886
No 331
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=3.6e-25 Score=248.41 Aligned_cols=268 Identities=17% Similarity=0.201 Sum_probs=182.0
Q ss_pred CCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCC--cccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCC-
Q 039419 17 NPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSL--SFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGG- 93 (1035)
Q Consensus 17 ~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l--~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~- 93 (1035)
.|++|+++.|++ ..++.++++++++. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+.+.
T Consensus 35 vc~~W~~~~~~~-~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 35 VCKRWYRLASDE-SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp SCHHHHHHHTCS-TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHHhcCc-hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 477899999984 45778899888776 4556666 8899999999999865554 67789999999999988755
Q ss_pred CChhhhccccccceEecccCCCCCCchhhhhhccccceecccc-ccCCC-CchhhccccccceeecCCCcccCCCCCCcC
Q 039419 94 VPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDN-YLSGN-LPVELGKLVNLEVIRAGGNKDIAGKIPYEI 171 (1035)
Q Consensus 94 ~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n-~l~~~-~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~ 171 (1035)
+|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+..+++|++|++++|.
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~---------- 179 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF---------- 179 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCT----------
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCC----------
Confidence 7888888999999999999888778888888889999999988 56642 55667777777777777762
Q ss_pred CCccceEEEEecccccccc-Ccccccccc-cccceeeccc--ccc-cCCccccccCcCCceEEecCCc-CCCCCChhhhc
Q 039419 172 GDCQSLLVVGLADTKVAGS-LPASLGKLS-KLQSLSVYTT--MLS-GEIPPQIGNCSELVDLFLYEND-LSGSLPRELGK 245 (1035)
Q Consensus 172 ~~l~~L~~L~l~~~~~~~~-~p~~l~~l~-~L~~L~l~~n--~l~-~~~p~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~ 245 (1035)
.+++. ++..+..++ +|++|++++| .++ +.++..+..+++|+.|+|++|. +++..+..+..
T Consensus 180 --------------~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~ 245 (336)
T 2ast_B 180 --------------DFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 245 (336)
T ss_dssp --------------TCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGG
T ss_pred --------------CcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhC
Confidence 22221 344555566 6666666666 333 2445555566666666666666 55455555666
Q ss_pred ccchhHhhccccc-ccccCCccccCCCCCcEEEccCccCCCCCCccccCC-CCCcEEEccCCccccCCCCcccC
Q 039419 246 LQKLEKMLLWQNN-FDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNL-SSLEELMLSNNNISGSIPPVLSN 317 (1035)
Q Consensus 246 l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~ 317 (1035)
+++|++|++++|. +.......+.++++|+.|++++| ++.. .+..+ .+|..|++++|++++..|..+..
T Consensus 246 l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 246 LNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 6666666666663 22222224566677777777777 4322 23333 23555667777777666665543
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.88 E-value=3.9e-23 Score=223.98 Aligned_cols=166 Identities=22% Similarity=0.248 Sum_probs=83.6
Q ss_pred cccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCc
Q 039419 219 IGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLE 298 (1035)
Q Consensus 219 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 298 (1035)
+..+++|++|+|++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|+
T Consensus 81 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 160 (272)
T 3rfs_A 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT 160 (272)
T ss_dssp GTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCC
Confidence 34444444444444444433333344444444444444444444444444555555555555555544444445555555
Q ss_pred EEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcc
Q 039419 299 ELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQN 378 (1035)
Q Consensus 299 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 378 (1035)
+|++++|++++..+..|..+++|++|+|++|+|+. ..+..+..+++|+.|+|++|.+.+. +++
T Consensus 161 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~----------~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~ 223 (272)
T 3rfs_A 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS----------VPDGVFDRLTSLQYIWLHDNPWDCT-------CPG 223 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC----------CCTTTTTTCTTCCEEECCSSCBCCC-------TTT
T ss_pred EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc----------cCHHHHhCCcCCCEEEccCCCcccc-------CcH
Confidence 55555555554444445555555555555554431 2233455566666666666665532 335
Q ss_pred cceEeccccccccCCCCCCCCCC
Q 039419 379 LTKLLLISNGISGLIPPEIGNCS 401 (1035)
Q Consensus 379 L~~L~L~~N~i~~~~~~~~~~l~ 401 (1035)
|+.|+++.|.++|.+|..++.+.
T Consensus 224 l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 224 IRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp THHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHHHHHHHhCCCcccCcccccC
Confidence 66666666666666666665543
No 333
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=2.4e-22 Score=219.48 Aligned_cols=180 Identities=27% Similarity=0.253 Sum_probs=92.4
Q ss_pred CCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCc
Q 039419 353 RSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLP 432 (1035)
Q Consensus 353 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~ 432 (1035)
++|+.|+|++|.+++..+..|..+++|++|+|++|.|++..+ ...+++|++|+|++|+|+ .+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----------------~~~l~~L~~L~Ls~N~l~-~l~ 93 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV----------------DGTLPVLGTLDLSHNQLQ-SLP 93 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC----------------CSCCTTCCEEECCSSCCS-SCC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC----------------CCCCCcCCEEECCCCcCC-cCc
Confidence 345555555555554444445555555555555555443211 122344555555555554 334
Q ss_pred ccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhcc
Q 039419 433 SSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEG 512 (1035)
Q Consensus 433 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 512 (1035)
..+..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+
T Consensus 94 ~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~------------ 161 (290)
T 1p9a_G 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT------------ 161 (290)
T ss_dssp CCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS------------
T ss_pred hhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC------------
Confidence 44444455555555555555444444444445555555555544444444444444444444444443
Q ss_pred CcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCccc
Q 039419 513 LDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGY 574 (1035)
Q Consensus 513 l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~ 574 (1035)
+..+..|..+++|++|+|++|+|+..+..+..+++|+.|+|++|+|.+.
T Consensus 162 -------------~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 162 -------------ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp -------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred -------------ccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 3334445566666777777777666666665666666666666666543
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=6.9e-24 Score=240.20 Aligned_cols=104 Identities=21% Similarity=0.114 Sum_probs=48.4
Q ss_pred ecCCcccccCCcCCCCCcccceEeecCcccCCCCC----CCCCCCC-CCceeeCCCCCCCCCCChhhhcc-----ccccc
Q 039419 37 IQSIELELPFPSNLSSLSFLQKLIISGSNLTGPIS----PDLGDCT-QLTTIDVSSNSLVGGVPSSIGKL-----INLQD 106 (1035)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~----~~~~~l~-~L~~L~ls~n~l~~~~p~~i~~l-----~~L~~ 106 (1035)
++.+++.+.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++|++
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 34444444444444444445555555555544333 3334444 45555555555544444444443 44555
Q ss_pred eEecccCCCCCCchhhhhh-----ccccceeccccccCC
Q 039419 107 LILNSNQLTGEIPKELGAC-----IKLKNLLLFDNYLSG 140 (1035)
Q Consensus 107 L~L~~n~l~~~~p~~l~~l-----~~L~~L~l~~n~l~~ 140 (1035)
|+|++|++++..+..++.. ++|++|+|++|.+++
T Consensus 85 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 123 (362)
T 3goz_A 85 LNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS 123 (362)
T ss_dssp EECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred EECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc
Confidence 5555555544444433332 445555555554443
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.2e-23 Score=238.21 Aligned_cols=263 Identities=19% Similarity=0.184 Sum_probs=138.4
Q ss_pred eEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCC----hhhhccc-cccceEecccCCCCCCchhhhhh-----cc
Q 039419 58 KLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVP----SSIGKLI-NLQDLILNSNQLTGEIPKELGAC-----IK 127 (1035)
Q Consensus 58 ~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p----~~i~~l~-~L~~L~L~~n~l~~~~p~~l~~l-----~~ 127 (1035)
.++|+.|++++.+|..+...++|++|||++|.+++..+ +.+..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35677777777666666666667777777777775555 5666676 77777777777776667677665 77
Q ss_pred ccceeccccccCCCCchhhccc-----cccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCccccc----c-
Q 039419 128 LKNLLLFDNYLSGNLPVELGKL-----VNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLG----K- 197 (1035)
Q Consensus 128 L~~L~l~~n~l~~~~p~~l~~l-----~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~----~- 197 (1035)
|++|+|++|.+++..+..++.. ++|++|++++|. +++..+..+. .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~-------------------------l~~~~~~~l~~~l~~~ 136 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWND-------------------------FSSKSSSEFKQAFSNL 136 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSC-------------------------GGGSCHHHHHHHHTTS
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCc-------------------------CCcHHHHHHHHHHHhC
Confidence 7777777777775555544433 455555554443 3333332222 2
Q ss_pred cccccceeecccccccCCcc----ccccCc-CCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCC-C
Q 039419 198 LSKLQSLSVYTTMLSGEIPP----QIGNCS-ELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNC-K 271 (1035)
Q Consensus 198 l~~L~~L~l~~n~l~~~~p~----~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l-~ 271 (1035)
.++|++|++++|.+++..+. .+..++ +|+.|+|++|.+++..+..+... +..+ +
T Consensus 137 ~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~ 196 (362)
T 3goz_A 137 PASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKF--------------------LASIPA 196 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH--------------------HHTSCT
T ss_pred CCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHH--------------------HHhCCC
Confidence 13555555555555532222 223333 55566666555554444333322 1122 2
Q ss_pred CCcEEEccCccCCCC----CCccccC-CCCCcEEEccCCccccCCC----CcccCCCccceeccccchhhhhhhhccccC
Q 039419 272 SLKTIDLSLNFFSGS----LPQSFGN-LSSLEELMLSNNNISGSIP----PVLSNATSLLQLQLDTNQISVFFAWQNKLE 342 (1035)
Q Consensus 272 ~L~~L~L~~n~l~~~----~~~~~~~-l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~ 342 (1035)
+|+.|+|++|.|++. ++..+.. .++|++|+|++|+|++..+ ..+..+++|+.|+|++|++..+... ..
T Consensus 197 ~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~---~~ 273 (362)
T 3goz_A 197 SVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKE---QC 273 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHH---HH
T ss_pred CCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHH---HH
Confidence 444444444444421 1222222 1244444444444443222 2233444455555555542211000 00
Q ss_pred CCCCcCCCCCCCCcEEeccCcCCCCC
Q 039419 343 GSIPSTLANCRSLEAVDLSHNALTGS 368 (1035)
Q Consensus 343 ~~~p~~l~~l~~L~~L~Ls~N~l~~~ 368 (1035)
..++..+..+++|+.||+++|.+...
T Consensus 274 ~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 274 KALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHhccCCceEEEecCCCcCCCc
Confidence 02234566777777788888877644
No 336
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=4.7e-22 Score=219.45 Aligned_cols=217 Identities=26% Similarity=0.373 Sum_probs=165.6
Q ss_pred ccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceec
Q 039419 246 LQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQ 325 (1035)
Q Consensus 246 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 325 (1035)
+.++..+.+..+.+.+.+. +..+++|+.|++++|.++. ++ .+..+++|++|+|++|++.+..+ +..+++|++|+
T Consensus 18 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~ 91 (308)
T 1h6u_A 18 LANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEE
Confidence 4455566677766665332 4567788888888888874 34 57778888888888888875544 78888888888
Q ss_pred cccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCccee
Q 039419 326 LDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIR 405 (1035)
Q Consensus 326 L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 405 (1035)
|++|+|+.+ ..+..+++|++|+|++|++++.. .+..+++|++|++++|++++..+
T Consensus 92 L~~n~l~~~------------~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~----------- 146 (308)
T 1h6u_A 92 LSGNPLKNV------------SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP----------- 146 (308)
T ss_dssp CCSCCCSCC------------GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG-----------
T ss_pred ccCCcCCCc------------hhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc-----------
Confidence 888877632 35777888888888888888543 37788888888888888875432
Q ss_pred EeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCC
Q 039419 406 LRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGR 485 (1035)
Q Consensus 406 L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 485 (1035)
+.++++|++|+|++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..
T Consensus 147 -----l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~ 215 (308)
T 1h6u_A 147 -----LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LAN 215 (308)
T ss_dssp -----GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTT
T ss_pred -----ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccC
Confidence 3456778899999999886443 8888999999999999987654 7888999999999999986553 788
Q ss_pred CCCCcEEEcCCCcCcCccch
Q 039419 486 CESLQSLDLSSNKLSGKIPV 505 (1035)
Q Consensus 486 l~~L~~L~Ls~N~l~~~~p~ 505 (1035)
+++|++|+|++|+++ ..|.
T Consensus 216 l~~L~~L~l~~N~i~-~~~~ 234 (308)
T 1h6u_A 216 TSNLFIVTLTNQTIT-NQPV 234 (308)
T ss_dssp CTTCCEEEEEEEEEE-CCCE
T ss_pred CCCCCEEEccCCeee-cCCe
Confidence 999999999999987 4443
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=3.5e-22 Score=221.00 Aligned_cols=206 Identities=22% Similarity=0.260 Sum_probs=104.9
Q ss_pred cCCceEEecCCcCCCCCChhh--hcccchhHhhcccccccccCC----ccccCCCCCcEEEccCccCCCCCCccccCCCC
Q 039419 223 SELVDLFLYENDLSGSLPREL--GKLQKLEKMLLWQNNFDGAIP----EEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSS 296 (1035)
Q Consensus 223 ~~L~~L~L~~n~l~~~~~~~l--~~l~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 296 (1035)
++|++|+|++|.+++..|..+ ..+++|++|++++|.+.+..+ ..+..+++|++|+|++|++++..+..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 345555555555555555544 455555555555555554333 22345666677777777666666666666666
Q ss_pred CcEEEccCCccccC---C-CCcccCCCccceeccccchhhhhhhhccccCCCCCc-CCCCCCCCcEEeccCcCCCCCCCC
Q 039419 297 LEELMLSNNNISGS---I-PPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPS-TLANCRSLEAVDLSHNALTGSLHP 371 (1035)
Q Consensus 297 L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~~~ 371 (1035)
|++|+|++|++.+. . +..+..+++|++|+|++|+|+.+.. .+. .+..+++|++|+|++|+|++..|.
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~--------~~~~l~~~l~~L~~L~Ls~N~l~~~~p~ 242 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTG--------VCAALAAAGVQPHSLDLSHNSLRATVNP 242 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHH--------HHHHHHHHTCCCSSEECTTSCCCCCCCS
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHH--------HHHHHHhcCCCCCEEECCCCCCCccchh
Confidence 66777666665431 1 1223445555555555555542211 001 123445555555555555544444
Q ss_pred CcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCcc
Q 039419 372 GLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQF 451 (1035)
Q Consensus 372 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l 451 (1035)
.+..+ ..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|
T Consensus 243 ~~~~~-----------------------------------~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l 284 (310)
T 4glp_A 243 SAPRC-----------------------------------MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRL 284 (310)
T ss_dssp CCSSC-----------------------------------CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCC
T ss_pred hHHhc-----------------------------------cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcC
Confidence 33333 11234555555555555 3343332 4555566666655
Q ss_pred CCCCchhccCccccchhhccCCccc
Q 039419 452 VGLIPESFGQLASLNRLILSKNSFS 476 (1035)
Q Consensus 452 ~~~~~~~~~~l~~L~~L~Ls~N~l~ 476 (1035)
+++ |. +..+++|+.|+|++|+|+
T Consensus 285 ~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 285 NRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCC-ch-hhhCCCccEEECcCCCCC
Confidence 543 21 445555666666666554
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=1.2e-21 Score=209.61 Aligned_cols=192 Identities=21% Similarity=0.217 Sum_probs=123.9
Q ss_pred CCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCCh
Q 039419 17 NPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPS 96 (1035)
Q Consensus 17 ~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~ 96 (1035)
+||.|.|.+|... .+.++++++++. .+|..+. +.|+.|+|++|.+++..+..++.+++|++|+|++|.+++..|.
T Consensus 3 ~Cp~~~gC~C~~~--~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 3 TCETVTGCTCNEG--KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp -CHHHHSSEEEGG--GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred cCCCCCceEcCCC--CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 6899999999532 224566666665 4555444 4666677777776665555666666777777777766655555
Q ss_pred hhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccc
Q 039419 97 SIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQS 176 (1035)
Q Consensus 97 ~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 176 (1035)
.+..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+.. +++
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-------------------------l~~ 132 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDR-------------------------LTK 132 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-------------------------CTT
T ss_pred HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhcc-------------------------CCc
Confidence 6666666666666666666444455566666666666666665332333344 444
Q ss_pred eEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCC
Q 039419 177 LLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGS 238 (1035)
Q Consensus 177 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 238 (1035)
|+.|++++|++.+..+..|+.+++|++|+|++|++++..+..+..+++|+.|+|++|.+.+.
T Consensus 133 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 133 LKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 44444455555555555677778888888888888766666777788888888888887754
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=3.1e-22 Score=221.50 Aligned_cols=231 Identities=16% Similarity=0.135 Sum_probs=144.3
Q ss_pred CCceEEecCCcCCCCCCh---hhhcccchhHhhcccccccccCCccc--cCCCCCcEEEccCccCCCCCC----ccccCC
Q 039419 224 ELVDLFLYENDLSGSLPR---ELGKLQKLEKMLLWQNNFDGAIPEEI--GNCKSLKTIDLSLNFFSGSLP----QSFGNL 294 (1035)
Q Consensus 224 ~L~~L~L~~n~l~~~~~~---~l~~l~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l 294 (1035)
.++.|.+.++.++..... .+..+++|++|++++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 466677777665521111 11223456666777776666666665 666667777777776665433 233456
Q ss_pred CCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcc
Q 039419 295 SSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLF 374 (1035)
Q Consensus 295 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 374 (1035)
++|++|+|++|++.+..+..|.++++|++|+|++|++...... ..+..+..+++|++|+|++|+++. ++..
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~------~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~-- 215 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGL------MAALCPHKFPAIQNLALRNTGMET-PTGV-- 215 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHH------HTTSCTTSSCCCCSCBCCSSCCCC-HHHH--
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhh------hHHHhhhcCCCCCEEECCCCCCCc-hHHH--
Confidence 6666666666666655556666666666666666654321000 001122344555555555555431 1110
Q ss_pred cCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCC---CCccEEEcCCCcc
Q 039419 375 QLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASL---TRLQVLDISVNQF 451 (1035)
Q Consensus 375 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l---~~L~~L~Ls~N~l 451 (1035)
+. ..+.++++|++|+|++|+|++..|..+..+ ++|++|+|++|+|
T Consensus 216 -------------------~~-------------~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l 263 (310)
T 4glp_A 216 -------------------CA-------------ALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGL 263 (310)
T ss_dssp -------------------HH-------------HHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCC
T ss_pred -------------------HH-------------HHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCC
Confidence 00 012345668888888888887767777666 6999999999999
Q ss_pred CCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCc
Q 039419 452 VGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLS 500 (1035)
Q Consensus 452 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 500 (1035)
+.+ |..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+
T Consensus 264 ~~l-p~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 264 EQV-PKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSC-CSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred Cch-hhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 954 55553 7999999999999965 43 788999999999999997
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=4.4e-22 Score=211.39 Aligned_cols=196 Identities=15% Similarity=0.200 Sum_probs=100.8
Q ss_pred CCcEEEccCccCCCCCCccccCCCCCcEEEccCCc-cccCCCCcccCCCccceecccc-chhhhhhhhccccCCCCCcCC
Q 039419 272 SLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNN-ISGSIPPVLSNATSLLQLQLDT-NQISVFFAWQNKLEGSIPSTL 349 (1035)
Q Consensus 272 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~i~~l~~~~n~l~~~~p~~l 349 (1035)
+|++|+|++|+|++..+..|.++++|++|++++|+ ++.+.+..|.++++|++|++++ |+|+.+ .+..|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i----------~~~~f 101 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYI----------DPDAL 101 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEE----------CTTSE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEc----------CHHHh
Confidence 44444444444443333344444444444444443 4433334444444444444444 444321 12344
Q ss_pred CCCCCCcEEeccCcCCCCCCCCCcccCcccc---eEecccc-ccccCCCCCCCCCCcceeEeeeccCCCCccc-eeecCC
Q 039419 350 ANCRSLEAVDLSHNALTGSLHPGLFQLQNLT---KLLLISN-GISGLIPPEIGNCSSLIRLRLMSFGNCTQLQ-MLNLSN 424 (1035)
Q Consensus 350 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---~L~L~~N-~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~-~L~L~~ 424 (1035)
.++++|++|++++|++++ +|. |..+++|+ +|++++| ++++..+..| .++++|+ +|++++
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~--------------~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAF--------------QGLCNETLTLKLYN 165 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTT--------------TTTBSSEEEEECCS
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccc--------------cchhcceeEEEcCC
Confidence 445555555555555543 232 44444444 5555555 5554433333 2334466 666666
Q ss_pred CccCCCCcccccCCCCccEEEcCCCc-cCCCCchhccCc-cccchhhccCCcccccCccccCCCCCCcEEEcCCC
Q 039419 425 NTLGGTLPSSLASLTRLQVLDISVNQ-FVGLIPESFGQL-ASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSN 497 (1035)
Q Consensus 425 N~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 497 (1035)
|+++.+.+..|.. ++|+.|+|++|+ ++++.+..|..+ ++|+.|++++|+|++..+. .+++|+.|+++++
T Consensus 166 n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 166 NGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 6666333334444 667777777774 666666666666 6777777777777633322 4566777777665
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=8.2e-22 Score=209.27 Aligned_cols=196 Identities=17% Similarity=0.178 Sum_probs=136.6
Q ss_pred CCcEEeccCcCCCCCCCCCcccCcccceEeccccc-cccCCCCCCCCCCcceeEeeeccCCCCccceeecCC-CccCCCC
Q 039419 354 SLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNG-ISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSN-NTLGGTL 431 (1035)
Q Consensus 354 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~-N~l~~~~ 431 (1035)
+|++|++++|++++..+..|..+++|++|++++|+ ++++.+..| .++++|++|+|++ |++++..
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f--------------~~l~~L~~L~l~~~n~l~~i~ 97 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSF--------------YNLSKVTHIEIRNTRNLTYID 97 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTE--------------ESCTTCCEEEEEEETTCCEEC
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHc--------------CCCcCCcEEECCCCCCeeEcC
Confidence 67777777777775555566677777777777775 665544433 3445677777777 7777666
Q ss_pred cccccCCCCccEEEcCCCccCCCCchhccCccccc---hhhccCC-cccccCccccCCCCCCc-EEEcCCCcCcCccchh
Q 039419 432 PSSLASLTRLQVLDISVNQFVGLIPESFGQLASLN---RLILSKN-SFSGAIPSSLGRCESLQ-SLDLSSNKLSGKIPVE 506 (1035)
Q Consensus 432 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~ 506 (1035)
+..|.++++|++|++++|+++++ |. |..+++|+ .|++++| ++++..+..|..+++|+ +|+|++|+++ .+|..
T Consensus 98 ~~~f~~l~~L~~L~l~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 98 PDALKELPLLKFLGIFNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp TTSEECCTTCCEEEEEEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred HHHhCCCCCCCEEeCCCCCCccc-cc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 66777777888888888887764 43 77777776 8888888 77766666778888888 8888888887 66666
Q ss_pred hhhhccCcceeeccCcc-CCCCCCccccCC-ccccEEeccCCcccCccccccccCCCcEEeccCC
Q 039419 507 LFEIEGLDISLNLSWNA-LSGAIPPQISAL-NKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYN 569 (1035)
Q Consensus 507 ~~~~~~l~~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N 569 (1035)
.+.. ..+..|++++|+ +++..+..|..+ ++|++|+|++|+++..+.. .+++|+.|+++++
T Consensus 175 ~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 175 AFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred hcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 5555 233456666663 666666667777 7777777777777765544 5667777777665
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=9.4e-24 Score=241.61 Aligned_cols=242 Identities=18% Similarity=0.235 Sum_probs=174.3
Q ss_pred cCCcCCCCCcccceEeecCcccCCCCC----CCCCCCCCCceeeCCCC---CCCCCCChhh-------hccccccceEec
Q 039419 45 PFPSNLSSLSFLQKLIISGSNLTGPIS----PDLGDCTQLTTIDVSSN---SLVGGVPSSI-------GKLINLQDLILN 110 (1035)
Q Consensus 45 ~~~~~~~~l~~L~~L~L~~~~l~~~~~----~~~~~l~~L~~L~ls~n---~l~~~~p~~i-------~~l~~L~~L~L~ 110 (1035)
.++..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 456677888999999999999987633 45778999999999986 4555667666 678899999999
Q ss_pred ccCCCC----CCchhhhhhccccceeccccccCCCCchhhcc----c---------cccceeecCCCcccCCCCCCcCCC
Q 039419 111 SNQLTG----EIPKELGACIKLKNLLLFDNYLSGNLPVELGK----L---------VNLEVIRAGGNKDIAGKIPYEIGD 173 (1035)
Q Consensus 111 ~n~l~~----~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~----l---------~~L~~L~l~~n~~~~~~~~~~~~~ 173 (1035)
+|.+++ .+|..+..+++|++|+|++|.+.+..+..++. + ++|++|++++|.
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~------------ 170 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR------------ 170 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC------------
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC------------
Confidence 999986 37778888999999999999886544444443 2 556666665554
Q ss_pred ccceEEEEecccccc-ccCc---ccccccccccceeeccccccc-----CCccccccCcCCceEEecCCcCC----CCCC
Q 039419 174 CQSLLVVGLADTKVA-GSLP---ASLGKLSKLQSLSVYTTMLSG-----EIPPQIGNCSELVDLFLYENDLS----GSLP 240 (1035)
Q Consensus 174 l~~L~~L~l~~~~~~-~~~p---~~l~~l~~L~~L~l~~n~l~~-----~~p~~l~~l~~L~~L~L~~n~l~----~~~~ 240 (1035)
++ ..++ ..+..+++|++|++++|.++. ..+..+..+++|+.|+|++|.++ ..+|
T Consensus 171 -------------l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~ 237 (386)
T 2ca6_A 171 -------------LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 237 (386)
T ss_dssp -------------CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH
T ss_pred -------------CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHH
Confidence 43 2222 355566677777777776652 23336667777777777777774 3556
Q ss_pred hhhhcccchhHhhccccccccc----CCcccc--CCCCCcEEEccCccCCC----CCCccc-cCCCCCcEEEccCCcccc
Q 039419 241 RELGKLQKLEKMLLWQNNFDGA----IPEEIG--NCKSLKTIDLSLNFFSG----SLPQSF-GNLSSLEELMLSNNNISG 309 (1035)
Q Consensus 241 ~~l~~l~~L~~L~l~~n~l~~~----~p~~~~--~l~~L~~L~L~~n~l~~----~~~~~~-~~l~~L~~L~L~~N~l~~ 309 (1035)
..+..+++|++|+|++|.+++. ++..+. .+++|+.|+|++|.|++ .+|..+ .++++|++|+|++|++++
T Consensus 238 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 6677777777777777777654 455563 38888999999998886 366666 668889999999998886
Q ss_pred CC
Q 039419 310 SI 311 (1035)
Q Consensus 310 ~~ 311 (1035)
..
T Consensus 318 ~~ 319 (386)
T 2ca6_A 318 ED 319 (386)
T ss_dssp TS
T ss_pred ch
Confidence 55
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=1.7e-24 Score=247.71 Aligned_cols=248 Identities=22% Similarity=0.244 Sum_probs=184.0
Q ss_pred eecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCCh----hhhccccccceEeccc---CCCCCCchhh-------hhh
Q 039419 60 IISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPS----SIGKLINLQDLILNSN---QLTGEIPKEL-------GAC 125 (1035)
Q Consensus 60 ~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~----~i~~l~~L~~L~L~~n---~l~~~~p~~l-------~~l 125 (1035)
.++...+. .++..+..+++|++|+|++|++.+..+. .+..+++|++|+|++| ++++.+|..+ ..+
T Consensus 15 ~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~ 93 (386)
T 2ca6_A 15 AITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKC 93 (386)
T ss_dssp SCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTC
T ss_pred CCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhC
Confidence 33444444 4555666777888888888887755333 3557788888888875 4444556555 466
Q ss_pred ccccceeccccccCC----CCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCc----ccccc
Q 039419 126 IKLKNLLLFDNYLSG----NLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLP----ASLGK 197 (1035)
Q Consensus 126 ~~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p----~~l~~ 197 (1035)
++|++|+|++|.+.+ .+|..+..+++|++|++++|. +++..+ ..+..
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~-------------------------l~~~~~~~l~~~l~~ 148 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNG-------------------------LGPQAGAKIARALQE 148 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSC-------------------------CHHHHHHHHHHHHHH
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCC-------------------------CCHHHHHHHHHHHHH
Confidence 777777777777765 245556666666666666554 433323 33444
Q ss_pred c---------ccccceeecccccc-cCCc---cccccCcCCceEEecCCcCCC-----CCChhhhcccchhHhhcccccc
Q 039419 198 L---------SKLQSLSVYTTMLS-GEIP---PQIGNCSELVDLFLYENDLSG-----SLPRELGKLQKLEKMLLWQNNF 259 (1035)
Q Consensus 198 l---------~~L~~L~l~~n~l~-~~~p---~~l~~l~~L~~L~L~~n~l~~-----~~~~~l~~l~~L~~L~l~~n~l 259 (1035)
+ ++|++|++++|.++ +.++ ..+..+++|+.|+|++|.++. ..+..+..+++|+.|+|++|.+
T Consensus 149 l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l 228 (386)
T 2ca6_A 149 LAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTF 228 (386)
T ss_dssp HHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCC
T ss_pred HhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCC
Confidence 4 89999999999997 3444 467789999999999999983 2344788999999999999999
Q ss_pred c----ccCCccccCCCCCcEEEccCccCCCC----CCccc--cCCCCCcEEEccCCcccc----CCCCcc-cCCCcccee
Q 039419 260 D----GAIPEEIGNCKSLKTIDLSLNFFSGS----LPQSF--GNLSSLEELMLSNNNISG----SIPPVL-SNATSLLQL 324 (1035)
Q Consensus 260 ~----~~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L 324 (1035)
+ ..+|..+..+++|++|+|++|.|++. ++..+ +.+++|++|+|++|.|+. .+|..+ .++++|++|
T Consensus 229 ~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L 308 (386)
T 2ca6_A 229 THLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFL 308 (386)
T ss_dssp HHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEE
T ss_pred CcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEE
Confidence 6 57888899999999999999999865 45566 448999999999999997 366666 678999999
Q ss_pred ccccchhhh
Q 039419 325 QLDTNQISV 333 (1035)
Q Consensus 325 ~L~~N~i~~ 333 (1035)
+|++|+++.
T Consensus 309 ~l~~N~l~~ 317 (386)
T 2ca6_A 309 ELNGNRFSE 317 (386)
T ss_dssp ECTTSBSCT
T ss_pred EccCCcCCc
Confidence 999999874
No 344
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=3.6e-22 Score=216.51 Aligned_cols=158 Identities=16% Similarity=0.033 Sum_probs=116.5
Q ss_pred ccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccc-cccc---cccccccHHHHHHHHHHHhcCCCCceeeEE
Q 039419 687 CLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYD-CQND---KIGIGGVRDSFSAEIKTLGSIRHKNIVRFL 762 (1035)
Q Consensus 687 ~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 762 (1035)
.|...+.||+|+||.||+|.+.+|+.||||++.......... ...+ ..........+.+|++++++++ | ++++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 355668999999999999988779999999996533211100 0000 0000012567899999999999 4 5555
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEE
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYI 842 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl 842 (1035)
+++. .+..|+||||++||+|.+ +.. .....++.|+++||+|||+. ||+||||||+|||++ ++.+||
T Consensus 168 ~~~~-~~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 168 KVYA-WEGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp CEEE-EETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEE
T ss_pred eEEe-ccceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEE
Confidence 5443 356799999999999998 421 12346999999999999999 999999999999999 999999
Q ss_pred eeccCccccccCCccccccccCCcccccCCcccc
Q 039419 843 ADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGY 876 (1035)
Q Consensus 843 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 876 (1035)
+|||+|+. +..|+|||++.
T Consensus 234 ~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 234 IDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp CCCTTCEE---------------TTSTTHHHHHH
T ss_pred EECCCCeE---------------CCCCCHHHHHH
Confidence 99999863 23468888754
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=3.6e-21 Score=216.64 Aligned_cols=240 Identities=20% Similarity=0.211 Sum_probs=153.9
Q ss_pred eEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCC-CccccCCCCCcE-EEccC
Q 039419 227 DLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSL-PQSFGNLSSLEE-LMLSN 304 (1035)
Q Consensus 227 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~-L~L~~ 304 (1035)
.++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+ +..|.++++|.+ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4445555555 344433 234555556666655444445666666666666666654333 345566666554 44455
Q ss_pred CccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccC-cCCCCCCCCCcccCc-ccceE
Q 039419 305 NNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSH-NALTGSLHPGLFQLQ-NLTKL 382 (1035)
Q Consensus 305 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~-~L~~L 382 (1035)
|+|..+.|+.|.++++|++|++++|+|+.+ .+..+....++..|++.+ |.+....+..|..+. .++.|
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~----------~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L 159 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHL----------PDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVIL 159 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSC----------CCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEE
T ss_pred CcccccCchhhhhccccccccccccccccC----------Cchhhcccchhhhhhhccccccccccccchhhcchhhhhh
Confidence 666666666666666666666666665532 223444555666777754 556655555566554 57788
Q ss_pred eccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecC-CCccCCCCcccccCCCCccEEEcCCCccCCCCchhccC
Q 039419 383 LLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLS-NNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQ 461 (1035)
Q Consensus 383 ~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~-~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 461 (1035)
+|++|+|+.+.+..+. ..+|++|+++ +|.++.+.+..|.++++|++|||++|+|+.+++..|.+
T Consensus 160 ~L~~N~i~~i~~~~f~---------------~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 160 WLNKNGIQEIHNSAFN---------------GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 224 (350)
T ss_dssp ECCSSCCCEECTTSST---------------TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT
T ss_pred ccccccccCCChhhcc---------------ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc
Confidence 8888888765444332 2458888886 47777666678899999999999999999888778888
Q ss_pred ccccchhhccCCcccccCccccCCCCCCcEEEcCCCc
Q 039419 462 LASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNK 498 (1035)
Q Consensus 462 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 498 (1035)
+++|+.+++. .++ .+| .+..+++|+.++++++.
T Consensus 225 L~~L~~l~~~--~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 225 LKKLRARSTY--NLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CCEEECTTCT--TCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred chHhhhccCC--CcC-cCC-CchhCcChhhCcCCCCc
Confidence 8888777653 444 555 37889999999998764
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=3.5e-21 Score=212.46 Aligned_cols=208 Identities=24% Similarity=0.368 Sum_probs=99.3
Q ss_pred EEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCC
Q 039419 276 IDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSL 355 (1035)
Q Consensus 276 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L 355 (1035)
+.+..+.+++.. .+..+++|++|++++|.+... + .+..+++|++|+|++|+|+.+ +. +..+++|
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~-----------~~-~~~l~~L 87 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDL-----------AP-LKNLTKI 87 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-----------GG-GTTCCSC
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCC-----------hh-HccCCCC
Confidence 344445554321 244566666666666666532 2 344555555555555544421 12 4444455
Q ss_pred cEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccc
Q 039419 356 EAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSL 435 (1035)
Q Consensus 356 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 435 (1035)
++|+|++|.+++. +.+..++ +|++|+|++|++++. + .+
T Consensus 88 ~~L~L~~n~l~~~--~~~~~l~--------------------------------------~L~~L~l~~n~l~~~-~-~l 125 (308)
T 1h6u_A 88 TELELSGNPLKNV--SAIAGLQ--------------------------------------SIKTLDLTSTQITDV-T-PL 125 (308)
T ss_dssp CEEECCSCCCSCC--GGGTTCT--------------------------------------TCCEEECTTSCCCCC-G-GG
T ss_pred CEEEccCCcCCCc--hhhcCCC--------------------------------------CCCEEECCCCCCCCc-h-hh
Confidence 5555555544421 1233333 444444444444432 1 14
Q ss_pred cCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcc
Q 039419 436 ASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDI 515 (1035)
Q Consensus 436 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 515 (1035)
..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|++|+|++|++++ ++.
T Consensus 126 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~---------- 190 (308)
T 1h6u_A 126 AGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD-ISP---------- 190 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGG----------
T ss_pred cCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc-Chh----------
Confidence 445555555555555554322 4445555555555555543222 4555555555555555541 111
Q ss_pred eeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcc
Q 039419 516 SLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTG 573 (1035)
Q Consensus 516 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~ 573 (1035)
+..+++|++|+|++|++.+.+ .+..+++|+.|++++|++++
T Consensus 191 ----------------l~~l~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 191 ----------------LASLPNLIEVHLKNNQISDVS-PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp ----------------GGGCTTCCEEECTTSCCCBCG-GGTTCTTCCEEEEEEEEEEC
T ss_pred ----------------hcCCCCCCEEEccCCccCccc-cccCCCCCCEEEccCCeeec
Confidence 334445555555555555444 24555555555555555554
No 347
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=1.1e-20 Score=202.16 Aligned_cols=183 Identities=27% Similarity=0.322 Sum_probs=116.3
Q ss_pred CCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcc
Q 039419 354 SLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPS 433 (1035)
Q Consensus 354 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~ 433 (1035)
+.+.++++++.++ .+|..+. ++++.|+|++|++++..+..|. ++++|++|+|++|+|++..+.
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~--------------~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFR--------------GLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTT--------------TCTTCCEEECTTSCCCCCCTT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhc--------------CcccCCEEECCCCcCCccCHh
Confidence 4566777777776 3444433 4666666666666655554433 334566666666666666666
Q ss_pred cccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccC
Q 039419 434 SLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGL 513 (1035)
Q Consensus 434 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l 513 (1035)
.|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~------------- 144 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ------------- 144 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-------------
T ss_pred HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC-------------
Confidence 6666666777777777766666666666666666666666666555555666666666666666665
Q ss_pred cceeeccCccCCCCCCccccCCccccEEeccCCcccCccc-cccccCCCcEEeccCCcCcccCCCh
Q 039419 514 DISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLL-ALSGLDNLVSLNVSYNNFTGYLPDS 578 (1035)
Q Consensus 514 ~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~ls~N~l~~~~p~~ 578 (1035)
+..+..|..+++|++|+|++|+|++.+. .+..+++|+.|+|++|+|++.....
T Consensus 145 ------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 198 (251)
T 3m19_A 145 ------------SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEI 198 (251)
T ss_dssp ------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTH
T ss_pred ------------ccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcccc
Confidence 2334455666677777777777776553 5666777777777777777654443
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=2e-22 Score=226.10 Aligned_cols=215 Identities=21% Similarity=0.191 Sum_probs=134.5
Q ss_pred CCCccceEEEEecccccccc-CcccccccccccceeecccccccCCccccccCcCCceEEecCC-cCCCC-CChhhhccc
Q 039419 171 IGDCQSLLVVGLADTKVAGS-LPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYEN-DLSGS-LPRELGKLQ 247 (1035)
Q Consensus 171 ~~~l~~L~~L~l~~~~~~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n-~l~~~-~~~~l~~l~ 247 (1035)
+..+++|+.|++++|.+.+. ++..+..+++|++|++++|.+++..+..++.+++|++|+|++| .+++. ++..+..++
T Consensus 89 ~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~ 168 (336)
T 2ast_B 89 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 168 (336)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCC
Confidence 33455555555555555544 5666667777777777777766666666777777777777777 45542 455566667
Q ss_pred chhHhhcccc-ccccc-CCccccCCC-CCcEEEccCc--cCC-CCCCccccCCCCCcEEEccCCc-cccCCCCcccCCCc
Q 039419 248 KLEKMLLWQN-NFDGA-IPEEIGNCK-SLKTIDLSLN--FFS-GSLPQSFGNLSSLEELMLSNNN-ISGSIPPVLSNATS 320 (1035)
Q Consensus 248 ~L~~L~l~~n-~l~~~-~p~~~~~l~-~L~~L~L~~n--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~ 320 (1035)
+|++|++++| .+++. ++..+..++ +|++|+|++| .++ +.++..+.++++|++|++++|. +++..+..+..+++
T Consensus 169 ~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~ 248 (336)
T 2ast_B 169 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 248 (336)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTT
T ss_pred CCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCC
Confidence 7777777777 66643 455566677 7777777777 343 2345556667777777777777 55555566667777
Q ss_pred cceeccccch-hhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccC-cccceEeccccccccCCCCCCC
Q 039419 321 LLQLQLDTNQ-ISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQL-QNLTKLLLISNGISGLIPPEIG 398 (1035)
Q Consensus 321 L~~L~L~~N~-i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~ 398 (1035)
|++|++++|. +... ....+..+++|+.|++++| ++ ...+..+ ..++.|++++|++++..|..++
T Consensus 249 L~~L~l~~~~~~~~~----------~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 249 LQHLSLSRCYDIIPE----------TLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CCEEECTTCTTCCGG----------GGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CCEeeCCCCCCCCHH----------HHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 7777777763 2210 0124666778888888877 33 2334444 3466666777777777766654
Q ss_pred C
Q 039419 399 N 399 (1035)
Q Consensus 399 ~ 399 (1035)
+
T Consensus 315 ~ 315 (336)
T 2ast_B 315 N 315 (336)
T ss_dssp S
T ss_pred c
Confidence 3
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=1.1e-20 Score=212.74 Aligned_cols=225 Identities=20% Similarity=0.144 Sum_probs=124.9
Q ss_pred CCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccc-eeecCCCccCCCCc
Q 039419 354 SLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQ-MLNLSNNTLGGTLP 432 (1035)
Q Consensus 354 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~-~L~L~~N~l~~~~~ 432 (1035)
++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+|.. .|.+++++. .+.+++|+|+.+.|
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~-------------~f~~L~~l~~~l~~~~N~l~~l~~ 97 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD-------------VFSNLPKLHEIRIEKANNLLYINP 97 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT-------------SBCSCTTCCEEEEEEETTCCEECT
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh-------------HhhcchhhhhhhcccCCcccccCc
Confidence 4455555555555333344555555555555555544322221 123333333 34455566665556
Q ss_pred ccccCCCCccEEEcCCCccCCCCchhccCccccchhhccC-CcccccCccccCCCC-CCcEEEcCCCcCcCccchhhhhh
Q 039419 433 SSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSK-NSFSGAIPSSLGRCE-SLQSLDLSSNKLSGKIPVELFEI 510 (1035)
Q Consensus 433 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~ 510 (1035)
..|..+++|++|++++|+|....+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+ .+|...|..
T Consensus 98 ~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~ 176 (350)
T 4ay9_X 98 EAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNG 176 (350)
T ss_dssp TSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTT
T ss_pred hhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccc
Confidence 6666666666666666666666555555555666666644 455545455555543 4666777777776 566666655
Q ss_pred ccCcceeecc-CccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCcccCCChhhhhccccccc
Q 039419 511 EGLDISLNLS-WNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGYLPDSKLFRQLSATEM 589 (1035)
Q Consensus 511 ~~l~~~L~Ls-~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~ 589 (1035)
..+. .|+++ +|.++.+.+..|..+++|++|||++|+|+..+.. .+.+|+.|.+.+++--..+|....+.+|..+.+
T Consensus 177 ~~L~-~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~--~~~~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l 253 (350)
T 4ay9_X 177 TQLD-ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSY--GLENLKKLRARSTYNLKKLPTLEKLVALMEASL 253 (350)
T ss_dssp EEEE-EEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSS--SCTTCCEEECTTCTTCCCCCCTTTCCSCCEEEC
T ss_pred cchh-HHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChh--hhccchHhhhccCCCcCcCCCchhCcChhhCcC
Confidence 5433 45655 3556655566677777777888887777776642 234444554444433334455455566665554
Q ss_pred cccccCC
Q 039419 590 AGNQGLC 596 (1035)
Q Consensus 590 ~~N~~~c 596 (1035)
.|+++|
T Consensus 254 -~~~~~c 259 (350)
T 4ay9_X 254 -TYPSHC 259 (350)
T ss_dssp -SCHHHH
T ss_pred -CCCccc
Confidence 355666
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=7.3e-20 Score=189.65 Aligned_cols=184 Identities=21% Similarity=0.190 Sum_probs=129.6
Q ss_pred CCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCCh
Q 039419 17 NPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPS 96 (1035)
Q Consensus 17 ~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~ 96 (1035)
..|.|.+|.|+..+. . .+|..+ .++|++|+|++|++++..+..++.+++|++|+|++|++++..+.
T Consensus 5 C~C~~~~v~c~~~~l-----------~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 5 CSCSGTTVECYSQGR-----------T-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp CEEETTEEECCSSCC-----------S-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred CEECCCEEEecCCCc-----------c-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 458999999986431 1 344444 35899999999999966666788999999999999999966666
Q ss_pred hhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccc
Q 039419 97 SIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQS 176 (1035)
Q Consensus 97 ~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 176 (1035)
.+..+++|++|+|++|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|. +.+..+..+..+++
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQ-LKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC-CSCCCTTTTTTCTT
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCc-cceeCHHHhccCCC
Confidence 67899999999999999996555567899999999999999985555557778888888887775 33222333455555
Q ss_pred eEEEEeccccccccCcccccccccccceeecccccccCCccccccC
Q 039419 177 LLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNC 222 (1035)
Q Consensus 177 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l 222 (1035)
|+.|++++|.+.+ .+++|++|++..|.++|.+|..++.+
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 5555555554432 23345555555555555555544443
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=8.1e-21 Score=224.58 Aligned_cols=208 Identities=24% Similarity=0.355 Sum_probs=132.8
Q ss_pred cCCCCCCCCCCc-----cceeE-EeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCc
Q 039419 8 LSNWNPSDSNPC-----KWSHI-TCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLT 81 (1035)
Q Consensus 8 l~~w~~~~~~~c-----~w~gi-~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~ 81 (1035)
+.+|..+. ++| .|.|+ .|.. +.++.|+++++++.+ +|..+. ++|++|+|++|.|+ .+| +.+++|+
T Consensus 33 l~~W~~~~-~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEKQA-LPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHTTC-CTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhccC-Cccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCC
Confidence 55786644 578 79999 7863 457778888888876 666663 67888888888887 566 4567888
Q ss_pred eeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCc
Q 039419 82 TIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNK 161 (1035)
Q Consensus 82 ~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 161 (1035)
+|+|++|+|++ +|. +.. +|++|+|++|++++ +|. .+++|++|+|++|.+++ +|. .+++|++|++++|.
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 88888888874 666 555 78888888888874 665 56778888888888773 554 45666666666665
Q ss_pred ccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCC-------ceEEecCCc
Q 039419 162 DIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSEL-------VDLFLYEND 234 (1035)
Q Consensus 162 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L-------~~L~L~~n~ 234 (1035)
+. .+|. +. ++|+. |+|++|.++ .+|. +.. +| +.|+|++|.
T Consensus 172 -L~-~lp~-l~--~~L~~------------------------L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~ 218 (571)
T 3cvr_A 172 -LT-FLPE-LP--ESLEA------------------------LDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENR 218 (571)
T ss_dssp -CS-CCCC-CC--TTCCE------------------------EECCSSCCS-SCCC-CC----------CCEEEECCSSC
T ss_pred -CC-Ccch-hh--CCCCE------------------------EECcCCCCC-chhh-HHH--hhhcccccceEEecCCCc
Confidence 22 2443 33 44444 445444444 3343 332 34 556666666
Q ss_pred CCCCCChhhhcccchhHhhcccccccccCCccccCC
Q 039419 235 LSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNC 270 (1035)
Q Consensus 235 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l 270 (1035)
|+ .+|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 219 l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 219 IT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred ce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 55 455555556666666666666655555555443
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=6.2e-20 Score=216.99 Aligned_cols=189 Identities=27% Similarity=0.335 Sum_probs=144.8
Q ss_pred CCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCC
Q 039419 272 SLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLAN 351 (1035)
Q Consensus 272 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~ 351 (1035)
+|+.|+|++|.|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|+. +|. +.+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-----------ip~-l~~ 120 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-----------LPE-LPA 120 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-----------CCC-CCT
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-----------cch-hhc
Confidence 78888888888875 555442 67888888888887 444 346788888888887762 444 444
Q ss_pred CCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCC
Q 039419 352 CRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTL 431 (1035)
Q Consensus 352 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~ 431 (1035)
+|+.|+|++|+|++ +|. .+++|+.|+|++|+|+++ |. .+++|++|+|++|+|++ +
T Consensus 121 --~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-p~-----------------~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 121 --SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTML-PE-----------------LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp --TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-CC-----------------CCTTCCEEECCSSCCSC-C
T ss_pred --CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcC-CC-----------------cCCCcCEEECCCCCCCC-c
Confidence 88889999998886 444 578899999999988863 32 13568999999999996 5
Q ss_pred cccccCCCCccEEEcCCCccCCCCchhccCcccc-------chhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccc
Q 039419 432 PSSLASLTRLQVLDISVNQFVGLIPESFGQLASL-------NRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIP 504 (1035)
Q Consensus 432 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 504 (1035)
|. |. ++|+.|+|++|+|+.+ |. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~~l-p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLESL-PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCSSC-CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCCch-hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 55 65 8999999999999954 44 554 67 99999999998 577778889999999999999999999
Q ss_pred hhhhhhcc
Q 039419 505 VELFEIEG 512 (1035)
Q Consensus 505 ~~~~~~~~ 512 (1035)
..+..+..
T Consensus 248 ~~l~~l~~ 255 (571)
T 3cvr_A 248 ESLSQQTA 255 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 88877644
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.79 E-value=1.2e-18 Score=180.42 Aligned_cols=181 Identities=24% Similarity=0.213 Sum_probs=112.8
Q ss_pred cEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCC
Q 039419 274 KTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCR 353 (1035)
Q Consensus 274 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~ 353 (1035)
+.++++++.++. +|..+ .++|++|++++|++++..+..|..+++|++|+|++|+|+. ..+..|..++
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------~~~~~~~~l~ 76 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS----------LPNGVFNKLT 76 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC----------CCTTTTTTCT
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc----------cChhhcCCCC
Confidence 345555555552 33222 2355566666666555544455555555555555555442 1223456667
Q ss_pred CCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcc
Q 039419 354 SLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPS 433 (1035)
Q Consensus 354 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~ 433 (1035)
+|++|+|++|++++..+..|..+++|++|++++|+|++..+..+. ++++|++|+|++|++++..+.
T Consensus 77 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--------------~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFD--------------KLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--------------TCTTCCEEECCSSCCSCCCTT
T ss_pred CcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhc--------------cCCcCCEEECCCCccceeCHH
Confidence 777777777777655555566677777777777777655444333 345577777777777766666
Q ss_pred cccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCC
Q 039419 434 SLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCES 488 (1035)
Q Consensus 434 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 488 (1035)
.|..+++|++|++++|.+.+ .+++|+.|+++.|+++|.+|..++.++.
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 67777888888888887664 3456778888888888888877776554
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=4.7e-19 Score=193.56 Aligned_cols=191 Identities=27% Similarity=0.368 Sum_probs=113.3
Q ss_pred ccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceec
Q 039419 246 LQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQ 325 (1035)
Q Consensus 246 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 325 (1035)
+.++..+.+..+.+.+..+ +..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|+
T Consensus 23 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~ 96 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF 96 (291)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEE
Confidence 4455666676666664332 44677788888888888743 3 37777888888888888875544 66777777777
Q ss_pred cccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCccee
Q 039419 326 LDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIR 405 (1035)
Q Consensus 326 L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 405 (1035)
|++|+|+.+ ..+..+++|++|+|++|++++. ..+..+++|+.|++++|++++. .
T Consensus 97 l~~n~l~~~------------~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~---------- 150 (291)
T 1h6t_A 97 LDENKVKDL------------SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--T---------- 150 (291)
T ss_dssp CCSSCCCCG------------GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--G----------
T ss_pred CCCCcCCCC------------hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--h----------
Confidence 777766532 2366677777777777777642 3455556666666666655532 1
Q ss_pred EeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCccc
Q 039419 406 LRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFS 476 (1035)
Q Consensus 406 L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 476 (1035)
.+..+++|++|+|++|++++..+ +..+++|+.|+|++|+|+++ + .+..+++|+.|++++|+++
T Consensus 151 ----~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 151 ----VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp ----GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred ----hhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 13334445555555555554332 55555555555555555543 1 2444555555555555544
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1.2e-18 Score=181.96 Aligned_cols=136 Identities=26% Similarity=0.281 Sum_probs=78.7
Q ss_pred CccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcceeec
Q 039419 440 RLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDISLNL 519 (1035)
Q Consensus 440 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~~L~L 519 (1035)
+|+.|+|++|+|+++.+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|+ .+|...|.....+..|+|
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEEC
Confidence 4444555555544444444444445555555555554444444555555555555555554 333333322222334555
Q ss_pred cCccCCCCCCccccCCccccEEeccCCcccCccc-cccccCCCcEEeccCCcCcccCC
Q 039419 520 SWNALSGAIPPQISALNKLSILDLSHNKLGGDLL-ALSGLDNLVSLNVSYNNFTGYLP 576 (1035)
Q Consensus 520 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~ls~N~l~~~~p 576 (1035)
++|+|++..|..|..+++|++|+|++|+|++.+. .|..+++|+.|+|++|+|.+...
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 5555555666677778888888888888887664 57778888888888888876543
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=7.8e-19 Score=210.13 Aligned_cols=191 Identities=27% Similarity=0.377 Sum_probs=98.1
Q ss_pred ccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceec
Q 039419 246 LQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQ 325 (1035)
Q Consensus 246 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 325 (1035)
+.++..+.+..+.+....+ +..+++|+.|+|++|.|.. ++ .|..+++|+.|+|++|+|.+..+ |..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3344455555555553322 3445556666666666553 22 35556666666666666554333 55555555555
Q ss_pred cccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCccee
Q 039419 326 LDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIR 405 (1035)
Q Consensus 326 L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 405 (1035)
|++|+|+.+ ..+..+++|+.|+|++|.|++. +.+..+++|+.|+|++|+|++. .
T Consensus 94 Ls~N~l~~l------------~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~---------- 147 (605)
T 1m9s_A 94 LDENKIKDL------------SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--T---------- 147 (605)
T ss_dssp CCSSCCCCC------------TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--G----------
T ss_pred CcCCCCCCC------------hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--h----------
Confidence 555554421 2455555666666666666532 2345555555555555555432 1
Q ss_pred EeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCccc
Q 039419 406 LRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFS 476 (1035)
Q Consensus 406 L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 476 (1035)
.|..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|++.
T Consensus 148 ----~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 148 ----VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp ----GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred ----hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 13334445555555555554433 55555555555555555543 23555555555555555554
No 357
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1.9e-20 Score=222.92 Aligned_cols=199 Identities=18% Similarity=0.088 Sum_probs=93.5
Q ss_pred CCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccce
Q 039419 75 GDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEV 154 (1035)
Q Consensus 75 ~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 154 (1035)
..+++|+.|+|++|+++ .+|+.|+.|++|++|++++|.....+|..+ ..+.+.+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll-----------~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLM-----------RALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-----------HHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHH-----------HhcccccCCHHHHHHHHhccc
Confidence 45666777777777766 667777777777777765553210111100 111233455666777777777
Q ss_pred ee-cCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCC
Q 039419 155 IR-AGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYEN 233 (1035)
Q Consensus 155 L~-l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n 233 (1035)
|+ ++.|. +..|..+.+.+|.+....+ ..|+.|++++|.+++ +|. ++.+++|+.|+|++|
T Consensus 414 L~~l~~n~------------~~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 414 VDPMRAAY------------LDDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HCGGGHHH------------HHHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS
T ss_pred Ccchhhcc------------cchhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCcc
Confidence 66 44332 1223333333333332111 124444444444442 333 444444444444444
Q ss_pred cCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCC-CccccCCCCCcEEEccCCccc
Q 039419 234 DLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSL-PQSFGNLSSLEELMLSNNNIS 308 (1035)
Q Consensus 234 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~ 308 (1035)
.|+ .+|..|+.+++|+.|+|++|++++ +| .++.+++|+.|+|++|+|++.. |..|+.+++|+.|+|++|+++
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 444 344444444444444444444443 33 3444444444444444444333 444444444444444444444
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=180.01 Aligned_cols=137 Identities=22% Similarity=0.259 Sum_probs=89.5
Q ss_pred cceeecCCCccCCCCc-ccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcC
Q 039419 417 LQMLNLSNNTLGGTLP-SSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLS 495 (1035)
Q Consensus 417 L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 495 (1035)
+++|+|++|+|++..+ ..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 4566666666664433 335556666666666666665555556666666666666666655555555566666666655
Q ss_pred CCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCc-cccccccCCCcEEeccCCcCccc
Q 039419 496 SNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGD-LLALSGLDNLVSLNVSYNNFTGY 574 (1035)
Q Consensus 496 ~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~l~~L~~L~ls~N~l~~~ 574 (1035)
+|+|+ +..|..|..+++|++|+|++|+|++. +..|..+++|+.|+|++|+|++.
T Consensus 114 ~N~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 114 SNRIT-------------------------CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TSCCC-------------------------CBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCcCC-------------------------eECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 55555 45566677778888888888888876 45778888888888888888876
Q ss_pred CCCh
Q 039419 575 LPDS 578 (1035)
Q Consensus 575 ~p~~ 578 (1035)
.+-.
T Consensus 169 c~l~ 172 (220)
T 2v70_A 169 CYLA 172 (220)
T ss_dssp GGGH
T ss_pred CchH
Confidence 6543
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=2.6e-18 Score=179.34 Aligned_cols=156 Identities=23% Similarity=0.280 Sum_probs=121.0
Q ss_pred cEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccc
Q 039419 356 EAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSL 435 (1035)
Q Consensus 356 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 435 (1035)
+.+++++|.++. +|..+. ..+++|+|++|+|++..+.. .|.++++|++|+|++|+|++..+..|
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~-------------~~~~l~~L~~L~L~~N~i~~i~~~~~ 77 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATG-------------IFKKLPQLRKINFSNNKITDIEEGAF 77 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCC-------------CGGGCTTCCEEECCSSCCCEECTTTT
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchh-------------hhccCCCCCEEECCCCcCCEECHHHh
Confidence 478888888874 454442 45678888888887664432 24456778888888888887777788
Q ss_pred cCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcc
Q 039419 436 ASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDI 515 (1035)
Q Consensus 436 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 515 (1035)
.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++
T Consensus 78 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-------------- 143 (220)
T 2v70_A 78 EGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITT-------------- 143 (220)
T ss_dssp TTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCC--------------
T ss_pred CCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCE--------------
Confidence 888888888888888888888888888888888888888888888888888888888888888873
Q ss_pred eeeccCccCCCCCCccccCCccccEEeccCCcccCcc
Q 039419 516 SLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDL 552 (1035)
Q Consensus 516 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 552 (1035)
..|..|..+++|++|+|++|++.++.
T Consensus 144 -----------~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 144 -----------VAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp -----------BCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred -----------ECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 33455667788888888888888755
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=2.7e-18 Score=193.92 Aligned_cols=180 Identities=29% Similarity=0.272 Sum_probs=121.3
Q ss_pred cEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccc
Q 039419 356 EAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSL 435 (1035)
Q Consensus 356 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 435 (1035)
+.+++++|.|+ .+|..+. ..++.|+|++|+|++..+..+. .++++|++|+|++|+|+++.+..|
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~-------------~~l~~L~~L~L~~N~i~~i~~~~~ 84 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTP-------------TRLTNLHSLLLSHNHLNFISSEAF 84 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSS-------------SCCTTCCEEECCSSCCCEECTTTT
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhh-------------hcccccCEEECCCCcCCccChhhc
Confidence 56778888777 3454443 3577788888887766555443 044668888888888887777778
Q ss_pred cCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcc
Q 039419 436 ASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDI 515 (1035)
Q Consensus 436 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 515 (1035)
..+++|++|+|++|+|+.+.+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|+ .+|..++..
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~----- 158 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKD----- 158 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC------
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcC-----
Confidence 88888888888888888777777888888888888888888777778888888888888888887 455444310
Q ss_pred eeeccCccCCCCCCccccCCccccEEeccCCcccCcc-ccccccCC--CcEEeccCCcCcc
Q 039419 516 SLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDL-LALSGLDN--LVSLNVSYNNFTG 573 (1035)
Q Consensus 516 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l~~--L~~L~ls~N~l~~ 573 (1035)
+..+++|+.|||++|+|+..+ ..+..++. |+.|+|++|+|.+
T Consensus 159 ----------------~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 159 ----------------GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp -------------------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ----------------cccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 123455555555555555544 23444444 2555666666554
No 361
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=2.7e-20 Score=221.55 Aligned_cols=218 Identities=18% Similarity=0.191 Sum_probs=160.7
Q ss_pred CCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhcccc
Q 039419 50 LSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLK 129 (1035)
Q Consensus 50 ~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 129 (1035)
+..+++|+.|+|++|.++ .+|++++.|++|+.|++++|.....+|. + +..+.+.+.+|..++.+++|+
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~----------l-l~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL----------L-MRALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH----------H-HHHHCTGGGHHHHHHHHHHHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH----------H-HHhcccccCCHHHHHHHHhcc
Confidence 477899999999999998 8999999999999999977642101111 1 112233345667777777777
Q ss_pred cee-ccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecc
Q 039419 130 NLL-LFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYT 208 (1035)
Q Consensus 130 ~L~-l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~ 208 (1035)
.|+ ++.|.+ .+|+.+.+++|. + ..++ ...|+.|++++|.+++ +|. |+.+++|+.|+|++
T Consensus 413 ~L~~l~~n~~-----------~~L~~l~l~~n~-i-~~l~-----~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~ 472 (567)
T 1dce_A 413 AVDPMRAAYL-----------DDLRSKFLLENS-V-LKME-----YADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSH 472 (567)
T ss_dssp HHCGGGHHHH-----------HHHHHHHHHHHH-H-HHHH-----HTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCS
T ss_pred cCcchhhccc-----------chhhhhhhhccc-c-cccC-----ccCceEEEecCCCCCC-CcC-ccccccCcEeecCc
Confidence 777 555543 244444454443 1 1111 1136677777777775 565 88899999999999
Q ss_pred cccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccC-CccccCCCCCcEEEccCccCCCCC
Q 039419 209 TMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAI-PEEIGNCKSLKTIDLSLNFFSGSL 287 (1035)
Q Consensus 209 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~ 287 (1035)
|.++ .+|..++++++|+.|+|++|.|++ +| .|+.+++|+.|+|++|++++.. |..|..+++|+.|+|++|+|++..
T Consensus 473 N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 473 NRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp SCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred cccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 9988 788899999999999999999985 66 7889999999999999998776 889999999999999999998654
Q ss_pred Ccc---ccCCCCCcEEEc
Q 039419 288 PQS---FGNLSSLEELML 302 (1035)
Q Consensus 288 ~~~---~~~l~~L~~L~L 302 (1035)
+.. +..+++|+.|++
T Consensus 550 ~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 550 GIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SCTTHHHHHCTTCSEEEC
T ss_pred cHHHHHHHHCcccCccCC
Confidence 432 334788888864
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=5e-18 Score=177.12 Aligned_cols=155 Identities=25% Similarity=0.308 Sum_probs=113.1
Q ss_pred cEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccc
Q 039419 356 EAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSL 435 (1035)
Q Consensus 356 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 435 (1035)
+.+++++|.++ .+|..+. ++|+.|+|++|+|+++.+..| .++++|++|+|++|+|++..|..|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~--------------~~l~~L~~L~Ls~N~i~~~~~~~~ 76 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAF--------------SPYKKLRRIDLSNNQISELAPDAF 76 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSS--------------TTCTTCCEEECCSSCCCEECTTTT
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHh--------------hCCCCCCEEECCCCcCCCcCHHHh
Confidence 56777777777 3444443 567777777777776555444 334567777788888777777778
Q ss_pred cCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhccCcc
Q 039419 436 ASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEGLDI 515 (1035)
Q Consensus 436 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 515 (1035)
.++++|++|+|++|+|+.+++..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|++
T Consensus 77 ~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-------------- 142 (220)
T 2v9t_B 77 QGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT-------------- 142 (220)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC--------------
T ss_pred hCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCE--------------
Confidence 888888888888888887766777777788888888888877777777777788777777777762
Q ss_pred eeeccCccCCCCCCccccCCccccEEeccCCcccCcc
Q 039419 516 SLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDL 552 (1035)
Q Consensus 516 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 552 (1035)
..+..|..+++|++|+|++|++.++.
T Consensus 143 -----------~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 143 -----------IAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp -----------CCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred -----------ECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 33445667788999999999988754
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=1.3e-18 Score=208.24 Aligned_cols=182 Identities=26% Similarity=0.351 Sum_probs=111.0
Q ss_pred hcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccce
Q 039419 244 GKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQ 323 (1035)
Q Consensus 244 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 323 (1035)
..+++|+.|++++|.+.. ++ .+..+++|+.|+|++|+|++..+ +..+++|+.|+|++|+|.+. ..|..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCE
Confidence 444555555555555542 22 35555666666666666654333 55666666666666666532 24556666666
Q ss_pred eccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcc
Q 039419 324 LQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSL 403 (1035)
Q Consensus 324 L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 403 (1035)
|+|++|+|+.+ ..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|+|++..| +
T Consensus 114 L~Ls~N~l~~l------------~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l------ 171 (605)
T 1m9s_A 114 LSLEHNGISDI------------NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L------ 171 (605)
T ss_dssp EECTTSCCCCC------------GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--G------
T ss_pred EEecCCCCCCC------------ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--h------
Confidence 66666655422 2456667777777777777644 556677777777777777765443 2
Q ss_pred eeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCcc
Q 039419 404 IRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLA 463 (1035)
Q Consensus 404 ~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 463 (1035)
..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+.+...+..+.
T Consensus 172 --------~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~ 221 (605)
T 1m9s_A 172 --------AGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLV 221 (605)
T ss_dssp --------TTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCE
T ss_pred --------ccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEE
Confidence 3446677888888888754 3577788888888888888765444444433
No 364
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=1.9e-18 Score=188.81 Aligned_cols=190 Identities=24% Similarity=0.327 Sum_probs=102.5
Q ss_pred CCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecC
Q 039419 79 QLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAG 158 (1035)
Q Consensus 79 ~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 158 (1035)
++..+.+..+.+.+..+ +..+++|++|++++|.++ .++ .+..+++|++|++++|++++ ++. ++.+++|++|+++
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECC
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECC
Confidence 34444454444442222 334555555555555555 233 35555555555555555542 222 4444444444444
Q ss_pred CCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCC
Q 039419 159 GNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGS 238 (1035)
Q Consensus 159 ~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 238 (1035)
+| .+.+ +..+..+++|++|++++|.+++ + ..+..+++|+.|++++|.+++.
T Consensus 99 ~n-------------------------~l~~--~~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~ 149 (291)
T 1h6t_A 99 EN-------------------------KVKD--LSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI 149 (291)
T ss_dssp SS-------------------------CCCC--GGGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC
T ss_pred CC-------------------------cCCC--ChhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc
Confidence 44 3332 1236666666666666666663 2 3566666666666666666643
Q ss_pred CChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCcccc
Q 039419 239 LPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISG 309 (1035)
Q Consensus 239 ~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 309 (1035)
..+..+++|++|++++|++.+..+ +..+++|+.|+|++|.|++. + .+..+++|+.|++++|++..
T Consensus 150 --~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 150 --TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred --hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 455666666666666666664333 56666666666666666642 2 35666666666666666654
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=9.1e-18 Score=176.39 Aligned_cols=139 Identities=22% Similarity=0.267 Sum_probs=111.1
Q ss_pred ccCCCCCCCCCCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCC
Q 039419 7 ALSNWNPSDSNPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVS 86 (1035)
Q Consensus 7 ~l~~w~~~~~~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls 86 (1035)
....|.... +.|+|.+|.|+..+ + ..+|..+. ++|++|+|++|.+++..|..+..+++|++|+|+
T Consensus 8 ~~~~~~~~~-~~Cs~~~v~c~~~~-----------l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 72 (229)
T 3e6j_A 8 HHSAACPSQ-CSCSGTTVDCRSKR-----------H-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLG 72 (229)
T ss_dssp ---CCCCTT-CEEETTEEECTTSC-----------C-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred hhhccCCCC-CEEeCCEeEccCCC-----------c-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECC
Confidence 344555543 67999999997542 2 14555554 889999999999998888889999999999999
Q ss_pred CCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCc
Q 039419 87 SNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNK 161 (1035)
Q Consensus 87 ~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 161 (1035)
+|++....+..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|.
T Consensus 73 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 146 (229)
T 3e6j_A 73 SNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ 146 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSC
T ss_pred CCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCc
Confidence 99998555566789999999999999999655666788999999999999998 788888888888888887775
No 366
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=9e-19 Score=215.15 Aligned_cols=245 Identities=18% Similarity=0.149 Sum_probs=110.6
Q ss_pred CCCCCCCCCccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEe-----ecCcccCCCCCCCCCCCCCCceee
Q 039419 10 NWNPSDSNPCKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLI-----ISGSNLTGPISPDLGDCTQLTTID 84 (1035)
Q Consensus 10 ~w~~~~~~~c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~-----L~~~~l~~~~~~~~~~l~~L~~L~ 84 (1035)
.|......++.|.+++++. ..|+.+++..+++.. .+..+.....|+.+. ++.|.+. ..++.+..++.|+.|+
T Consensus 154 ~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~ 230 (727)
T 4b8c_D 154 QPTGDSTPSGTATNSAVST-PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALD 230 (727)
T ss_dssp -----------------------------------------------------------------------CCCCCCEEE
T ss_pred CCcCCCCccccCCCceecC-CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEE
Confidence 4544445578999999986 468899998888875 344443333344433 3334444 5577788899999999
Q ss_pred CCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccccccceeecCCCcccC
Q 039419 85 VSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIA 164 (1035)
Q Consensus 85 ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~ 164 (1035)
|++|.+. .+|..+..+++|++|+|++|.++ .+|..|+.|++|++|+|++|.|+ .+|..|++|++|++|+|++|. .
T Consensus 231 Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~--l 305 (727)
T 4b8c_D 231 LSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM--V 305 (727)
T ss_dssp CTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC--C
T ss_pred CCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC--C
Confidence 9999998 88888889999999999999998 88888999999999999999998 788888889899988888886 3
Q ss_pred CCCCCcCCCccceEEEEeccccccccCccccccccc-ccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhh
Q 039419 165 GKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSK-LQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPREL 243 (1035)
Q Consensus 165 ~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~-L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l 243 (1035)
..+|..++.+++|+.|+|++|.+.+.+|..+..+.. +..|+|++|.+++.+|.. |..|+++.|... -..+
T Consensus 306 ~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~---~~~~ 376 (727)
T 4b8c_D 306 TTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEP---QREY 376 (727)
T ss_dssp CCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------------------------
T ss_pred CccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeeccccc---cccc
Confidence 466666777777777777777777666666655432 223566666666655543 344445544110 0111
Q ss_pred hcccchhHhhcccccccccCCccccCCCCCcEEEccCccCC
Q 039419 244 GKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFS 284 (1035)
Q Consensus 244 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 284 (1035)
+ .+.+..+..+.++..+....+++|.+.
T Consensus 377 ~-------------~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 377 D-------------SLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp --------------------------------------CCC
T ss_pred C-------------Cccccccchhhcccccceeeeeccccc
Confidence 1 233334444556666777778888765
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.6e-17 Score=174.56 Aligned_cols=135 Identities=27% Similarity=0.290 Sum_probs=77.7
Q ss_pred ccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcC
Q 039419 416 QLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLS 495 (1035)
Q Consensus 416 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 495 (1035)
+|++|+|++|+|++..|..|..+++|++|+|++|+|..+.+..|..+++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 41 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls 120 (229)
T 3e6j_A 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMC 120 (229)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEecc
Confidence 35555555555555555555556666666666666655555555666666666666666665555555666666666666
Q ss_pred CCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCcc-ccccccCCCcEEeccCCcCccc
Q 039419 496 SNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDL-LALSGLDNLVSLNVSYNNFTGY 574 (1035)
Q Consensus 496 ~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l~~L~~L~ls~N~l~~~ 574 (1035)
+|+|+ .+| ..+..+++|++|+|++|+|++.+ ..|..+++|+.|+|++|+|++.
T Consensus 121 ~N~l~-~lp-------------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 121 CNKLT-ELP-------------------------RGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SSCCC-SCC-------------------------TTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCccc-ccC-------------------------cccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 66665 333 33344455555555555555544 2355566666666666666655
Q ss_pred CC
Q 039419 575 LP 576 (1035)
Q Consensus 575 ~p 576 (1035)
++
T Consensus 175 c~ 176 (229)
T 3e6j_A 175 CR 176 (229)
T ss_dssp BG
T ss_pred cc
Confidence 54
No 368
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=3.8e-18 Score=182.67 Aligned_cols=150 Identities=19% Similarity=0.178 Sum_probs=107.1
Q ss_pred cccCCeeeeeCCcEEEEEEE-CCCcE--EEEEEecCCCcccccc---cccc-cc------cccccHHHHHHHHHHHhcCC
Q 039419 688 LVEDSVVGKGCSGIVYRAEM-ENGEV--IAVKKLWPTTMAAEYD---CQND-KI------GIGGVRDSFSAEIKTLGSIR 754 (1035)
Q Consensus 688 ~~~~~~iG~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~~~~~---~~~~-~~------~~~~~~~~~~~E~~~l~~l~ 754 (1035)
|...+.||+|+||.||+|.+ .+|+. ||||++.......... ...+ .. ........+.+|+.+++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999987 67888 9999976542111000 0000 00 00012346889999999998
Q ss_pred CCce--eeEEeEEEcCCcceEEEEeCCC-C----ChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhh-ccCCCCeeccC
Q 039419 755 HKNI--VRFLGCCWNRNTRLLMYDYMPN-G----SLGSLLHERRDSCLEWELRYRIILGAAQGLAYLH-HDCVPPIVHRD 826 (1035)
Q Consensus 755 hpni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ivHrD 826 (1035)
|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. ||+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 8754 444443 367899999942 4 66665432 123456789999999999999 88 999999
Q ss_pred CCcccEEEcCCCceEEeeccCcccc
Q 039419 827 IKANNILIGPEFEPYIADFGLAKLV 851 (1035)
Q Consensus 827 ikp~NIll~~~~~~kl~DFG~a~~~ 851 (1035)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 8999999999754
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=2.7e-18 Score=184.45 Aligned_cols=171 Identities=22% Similarity=0.339 Sum_probs=112.1
Q ss_pred cccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCcccee
Q 039419 245 KLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQL 324 (1035)
Q Consensus 245 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 324 (1035)
.+.++..+++++|.+.+.. .+..+++|+.|++++|.|+. ++ .+..+++|++|+|++|+|++..+ |..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 5677788888888887433 57778888888888888874 44 57788888888888888876544 7777777777
Q ss_pred ccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcce
Q 039419 325 QLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLI 404 (1035)
Q Consensus 325 ~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 404 (1035)
+|++|+|+.+ |. +.. ++|+.|+|++|++++. +.+..+++|++|++++|+|++..
T Consensus 91 ~L~~N~l~~l-----------~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~----------- 144 (263)
T 1xeu_A 91 SVNRNRLKNL-----------NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV----------- 144 (263)
T ss_dssp ECCSSCCSCC-----------TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCG-----------
T ss_pred ECCCCccCCc-----------Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCCh-----------
Confidence 7777776632 21 222 6677777777777642 24556666666666666665431
Q ss_pred eEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCC
Q 039419 405 RLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGL 454 (1035)
Q Consensus 405 ~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 454 (1035)
.+..+++|++|+|++|+|++. ..+..+++|+.|++++|++...
T Consensus 145 -----~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -----MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -----GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -----HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 133345566666666666644 4555666666666666666544
No 370
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.73 E-value=1.1e-17 Score=188.95 Aligned_cols=163 Identities=28% Similarity=0.265 Sum_probs=77.2
Q ss_pred cEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCccc-CCCccceeccccchhhhhhhhccccCCCCCcCCCCC
Q 039419 274 KTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLS-NATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANC 352 (1035)
Q Consensus 274 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l 352 (1035)
+.+++++|.++ .+|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|+.+ .+..|.++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i----------~~~~~~~l 87 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI----------SSEAFVPV 87 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE----------CTTTTTTC
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc----------ChhhccCC
Confidence 35566666665 3443332 3355666666666555444444 445555555554444321 12345555
Q ss_pred CCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCc
Q 039419 353 RSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLP 432 (1035)
Q Consensus 353 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~ 432 (1035)
++|++|+|++|+|+...+..|..+++|++|+|++|+|++..|..|. ++++|++|+|++|+|++..+
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~--------------~l~~L~~L~L~~N~l~~l~~ 153 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFE--------------DMAQLQKLYLSQNQISRFPV 153 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT--------------TCTTCCEEECCSSCCCSCCG
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhC--------------CcccCCEEECCCCcCCeeCH
Confidence 5555555555555544444444455555555555554443333322 22334555555555553333
Q ss_pred ccc---cCCCCccEEEcCCCccCCCCchhccCcc
Q 039419 433 SSL---ASLTRLQVLDISVNQFVGLIPESFGQLA 463 (1035)
Q Consensus 433 ~~l---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 463 (1035)
..| ..+++|+.|+|++|+|+.+.+..|..++
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~ 187 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLP 187 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHHSC
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhhcc
Confidence 333 3345555555555555544444444433
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=4.3e-18 Score=209.11 Aligned_cols=151 Identities=23% Similarity=0.310 Sum_probs=99.5
Q ss_pred CCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEE
Q 039419 414 CTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLD 493 (1035)
Q Consensus 414 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 493 (1035)
+++|++|+|++|+|+ .+|..|..+++|++|+|++|+|+ .+|..|..+++|++|+|++|.|+ .+|..|+.+++|++|+
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~ 322 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLG 322 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEE
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEe
Confidence 455777888888888 67788889999999999999999 55888999999999999999997 6788899999999999
Q ss_pred cCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCC--------cccCcc-ccccccCCCcEE
Q 039419 494 LSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHN--------KLGGDL-LALSGLDNLVSL 564 (1035)
Q Consensus 494 Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N--------~l~~~~-~~~~~l~~L~~L 564 (1035)
|++|+|++.+|..++........++|++|.+++.+|. .|+.|++++| .|.... ..+..+..+...
T Consensus 323 L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~ 396 (727)
T 4b8c_D 323 VEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFT 396 (727)
T ss_dssp CTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C------------------------------------
T ss_pred CCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhccccccee
Confidence 9999999888888876655445688999999988875 4667778877 222211 234445555556
Q ss_pred eccCCcCcc
Q 039419 565 NVSYNNFTG 573 (1035)
Q Consensus 565 ~ls~N~l~~ 573 (1035)
.+++|-+.+
T Consensus 397 ~ls~Nil~~ 405 (727)
T 4b8c_D 397 VLSYNTLCQ 405 (727)
T ss_dssp -----CCCG
T ss_pred eeecccccc
Confidence 666666543
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=6.5e-18 Score=181.44 Aligned_cols=170 Identities=18% Similarity=0.250 Sum_probs=105.8
Q ss_pred ccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEE
Q 039419 197 KLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTI 276 (1035)
Q Consensus 197 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 276 (1035)
.+.++..++++++.++ .++ .+..+++|+.|++++|.++ .++ .+..+++|++|++++|++++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4666777777777776 333 5667777777777777777 344 56667777777777777664333 6667777777
Q ss_pred EccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCc
Q 039419 277 DLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLE 356 (1035)
Q Consensus 277 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~ 356 (1035)
+|++|++++. +. +.. ++|++|+|++|++++. ..+..+++|+.|+|++|+|+.+ ..+..+++|+
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~------------~~l~~l~~L~ 153 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI------------VMLGFLSKLE 153 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC------------GGGGGCTTCC
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC------------hHHccCCCCC
Confidence 7777777643 32 222 6677777777776643 2356666666666666665532 2455566666
Q ss_pred EEeccCcCCCCCCCCCcccCcccceEecccccccc
Q 039419 357 AVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISG 391 (1035)
Q Consensus 357 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 391 (1035)
.|+|++|++++. ..+..+++|+.|++++|++++
T Consensus 154 ~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 154 VLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp EEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred EEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 666666666643 445556666666666666554
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=2.5e-17 Score=168.75 Aligned_cols=107 Identities=15% Similarity=0.253 Sum_probs=46.1
Q ss_pred cccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcE
Q 039419 196 GKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKT 275 (1035)
Q Consensus 196 ~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 275 (1035)
+.+++|++|++++|.++ .+| .+..+++|+.|++++|.++. +..+..+++|++|++++|++++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 33444444444444444 333 34444455555555543331 123344444444444444444333444444444444
Q ss_pred EEccCccCCCCCCccccCCCCCcEEEccCCc
Q 039419 276 IDLSLNFFSGSLPQSFGNLSSLEELMLSNNN 306 (1035)
Q Consensus 276 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 306 (1035)
|+|++|++++..+..|+.+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 4444444443333444444444444444443
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=4.9e-17 Score=165.71 Aligned_cols=157 Identities=21% Similarity=0.273 Sum_probs=81.9
Q ss_pred ccceeecCCCccCCCCcc-cccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEc
Q 039419 416 QLQMLNLSNNTLGGTLPS-SLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDL 494 (1035)
Q Consensus 416 ~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 494 (1035)
+|++|+|++|+|++..+. .|..+++|++|+|++|+|+++.|..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 355555555555544433 3555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcCccc
Q 039419 495 SSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNFTGY 574 (1035)
Q Consensus 495 s~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l~~~ 574 (1035)
++|+|+ +..|..|..+++|++|+|++|+++++....+-...|+...+.++...+.
T Consensus 110 ~~N~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 110 YDNQIS-------------------------CVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CSSCCC-------------------------EECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCCcCC-------------------------eeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 555554 2334455566677777777777766543211111223333444444443
Q ss_pred CCChhhhhccccccccccccCCCCC
Q 039419 575 LPDSKLFRQLSATEMAGNQGLCSRG 599 (1035)
Q Consensus 575 ~p~~~~~~~l~~~~~~~N~~~c~~~ 599 (1035)
.|. .++.....++..+...|..+
T Consensus 165 ~P~--~l~~~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 165 APS--KVRDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp SST--TTTTSBGGGSCTTTCCCCCC
T ss_pred CCh--HHcCCChhhCcHhhcCcCCC
Confidence 333 23444444455555555543
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=3.5e-17 Score=167.72 Aligned_cols=155 Identities=15% Similarity=0.201 Sum_probs=103.3
Q ss_pred ccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCC
Q 039419 218 QIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSL 297 (1035)
Q Consensus 218 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 297 (1035)
....+++|+.|++++|.++ .+| .+..+++|++|++++|.+.. +..+..+++|++|++++|++++..+..|+.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3466778888888888887 455 57777777777777776552 3357777777777777777776666777777777
Q ss_pred cEEEccCCccccCCCCcccCCCccceeccccch-hhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccC
Q 039419 298 EELMLSNNNISGSIPPVLSNATSLLQLQLDTNQ-ISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQL 376 (1035)
Q Consensus 298 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 376 (1035)
++|++++|++++..+..|..+++|++|++++|+ ++. +| .+..+++|+.|++++|.+++. + .+..+
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-----------~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l 180 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-----------IM-PLKTLPELKSLNIQFDGVHDY-R-GIEDF 180 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-----------CG-GGGGCSSCCEEECTTBCCCCC-T-TGGGC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-----------cH-hhcCCCCCCEEECCCCCCcCh-H-HhccC
Confidence 777777777776566666667777777777665 542 22 456666666666666666642 2 55566
Q ss_pred cccceEeccccccc
Q 039419 377 QNLTKLLLISNGIS 390 (1035)
Q Consensus 377 ~~L~~L~L~~N~i~ 390 (1035)
++|++|++++|+|.
T Consensus 181 ~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 181 PKLNQLYAFSQTIG 194 (197)
T ss_dssp SSCCEEEECBC---
T ss_pred CCCCEEEeeCcccC
Confidence 66666666666654
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=2.9e-17 Score=183.09 Aligned_cols=200 Identities=12% Similarity=0.102 Sum_probs=107.3
Q ss_pred CCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCC
Q 039419 270 CKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTL 349 (1035)
Q Consensus 270 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l 349 (1035)
+++|+.|+|.+ .++.+...+|.++++|+.|++++|.+..+.+.+|.++.++..+.+..+.... .....-..+|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~------~~~~i~~~~f 172 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYR------FKNRWEHFAF 172 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHH------TSTTTTTSCE
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhh------cccccccccc
Confidence 66666666666 5555555556666666666666666655555666665555555554432210 0000111233
Q ss_pred CCCCCCc--------------------------EEeccCcCCCCCCCCCcc-cCcccceEeccccccccCCCCCCCCCCc
Q 039419 350 ANCRSLE--------------------------AVDLSHNALTGSLHPGLF-QLQNLTKLLLISNGISGLIPPEIGNCSS 402 (1035)
Q Consensus 350 ~~l~~L~--------------------------~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 402 (1035)
.++.+|+ .+.+.++-.. .....+. .+++|+.|+|++|+++.+.+..
T Consensus 173 ~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~a------ 245 (329)
T 3sb4_A 173 IEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFT------ 245 (329)
T ss_dssp EESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTT------
T ss_pred ccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhh------
Confidence 3444444 3333322111 0000111 2566666666666665443333
Q ss_pred ceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCcc-EEEcCCCccCCCCchhccCccccchhhccCCcccccCcc
Q 039419 403 LIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQ-VLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPS 481 (1035)
Q Consensus 403 L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 481 (1035)
|.++++|+.|+|.+| ++.+.+.+|.++++|+ .|++.+ .++.+.+.+|.++++|+.|++++|+++.+.+.
T Consensus 246 --------F~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~ 315 (329)
T 3sb4_A 246 --------FAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDE 315 (329)
T ss_dssp --------TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTT
T ss_pred --------hhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchh
Confidence 344455666666666 5555566666666676 677666 56656666677777777777766666666666
Q ss_pred ccCCCCCCcEEE
Q 039419 482 SLGRCESLQSLD 493 (1035)
Q Consensus 482 ~~~~l~~L~~L~ 493 (1035)
+|.++++|+.|+
T Consensus 316 aF~~~~~L~~ly 327 (329)
T 3sb4_A 316 LFGNGVPSKLIY 327 (329)
T ss_dssp TTCTTCCCCEEE
T ss_pred hhcCCcchhhhc
Confidence 666666666665
No 377
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66 E-value=1.7e-17 Score=183.48 Aligned_cols=147 Identities=14% Similarity=0.080 Sum_probs=102.5
Q ss_pred cccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccc-ccccccccc-------ccHHHHHHHHHHHhcCCCCcee
Q 039419 688 LVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYD-CQNDKIGIG-------GVRDSFSAEIKTLGSIRHKNIV 759 (1035)
Q Consensus 688 ~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~E~~~l~~l~hpniv 759 (1035)
|.+.+.||+|+||.||+|...+|+.||||+++......... ...+..... ..+-...+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 78889999999999999999999999999986542211100 000000000 0111224577777777555442
Q ss_pred --eEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCC
Q 039419 760 --RFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPE 837 (1035)
Q Consensus 760 --~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~ 837 (1035)
+.++. ...++||||++|++|.++... .....++.|++.+|.|+|+. |||||||||.|||++++
T Consensus 177 vp~p~~~----~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 177 VPEPIAQ----SRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREE 241 (397)
T ss_dssp CCCEEEE----ETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEE
T ss_pred CCeeeec----cCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCC
Confidence 22322 234799999999888765422 12356889999999999998 99999999999999887
Q ss_pred C----------ceEEeeccCcc
Q 039419 838 F----------EPYIADFGLAK 849 (1035)
Q Consensus 838 ~----------~~kl~DFG~a~ 849 (1035)
+ .+.|+||+-+-
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCE
T ss_pred CCcccccccccceEEEEeCCcc
Confidence 6 38999999764
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=2.3e-16 Score=160.75 Aligned_cols=135 Identities=27% Similarity=0.363 Sum_probs=114.7
Q ss_pred cEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccc
Q 039419 356 EAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSL 435 (1035)
Q Consensus 356 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 435 (1035)
+.+++++|.++ .+|..+.. +|++|++++|+|++..+.. .|.++++|++|+|++|+|++..|..|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~-------------~~~~l~~L~~L~Ls~N~l~~~~~~~~ 74 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDG-------------LFGRLPHLVKLELKRNQLTGIEPNAF 74 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSC-------------SGGGCTTCCEEECCSSCCCCBCTTTT
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCcc-------------ccccCCCCCEEECCCCCCCCcCHhHc
Confidence 67888888887 45555443 8888999999888765542 14456779999999999998889999
Q ss_pred cCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchh
Q 039419 436 ASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVE 506 (1035)
Q Consensus 436 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 506 (1035)
.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|.+++..+..
T Consensus 75 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~ 145 (192)
T 1w8a_A 75 EGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA 145 (192)
T ss_dssp TTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH
T ss_pred CCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch
Confidence 99999999999999999998888999999999999999999999999999999999999999999776643
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=5.5e-17 Score=180.77 Aligned_cols=252 Identities=15% Similarity=0.166 Sum_probs=168.7
Q ss_pred cccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhc--------ccchhHhhcccccccccCCccccC
Q 039419 198 LSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGK--------LQKLEKMLLWQNNFDGAIPEEIGN 269 (1035)
Q Consensus 198 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~--------l~~L~~L~l~~n~l~~~~p~~~~~ 269 (1035)
+++|+.|+|++|++. .....-+.++.+..+.+..|.|. +..|.+ +++|++|+|.+ +++...+.+|.+
T Consensus 48 l~~L~~LdLs~n~i~-~~~~~~~~~~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~ 122 (329)
T 3sb4_A 48 FPSLKVLDISNAEIK-MYSGKAGTYPNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKG 122 (329)
T ss_dssp CTTCCEEEEEEEEEC-CEEESSSSSGGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTT
T ss_pred hccCeEEecCcceeE-EecCccccccccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHhhc
Confidence 667777777777776 11111112223455555555433 345666 78888888877 777666777888
Q ss_pred CCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCcc----ccCCCCcccCCCccc-eeccccch-hhhhhhh----cc
Q 039419 270 CKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNI----SGSIPPVLSNATSLL-QLQLDTNQ-ISVFFAW----QN 339 (1035)
Q Consensus 270 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l----~~~~~~~~~~l~~L~-~L~L~~N~-i~~l~~~----~n 339 (1035)
+++|+.|++++|.+..+.+.+|.++.++..+.+..+.. .......|.++..|+ .+.+.... +...... .+
T Consensus 123 ~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~ 202 (329)
T 3sb4_A 123 CDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPR 202 (329)
T ss_dssp CTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGG
T ss_pred CcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCcc
Confidence 88888888888888777777888777777777665322 223444555555555 22222110 0000000 00
Q ss_pred -----ccCCCC----CcCC-CCCCCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeee
Q 039419 340 -----KLEGSI----PSTL-ANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLM 409 (1035)
Q Consensus 340 -----~l~~~~----p~~l-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~ 409 (1035)
.+.+.+ ...+ ..+++|+.|+|++|+++.+....|.++.+|++|+|.+| ++.+.+.
T Consensus 203 ~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~-------------- 267 (329)
T 3sb4_A 203 DINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQR-------------- 267 (329)
T ss_dssp GCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTT--------------
T ss_pred ccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHH--------------
Confidence 000000 0011 13789999999999999777888999999999999998 6654444
Q ss_pred ccCCCCccc-eeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhc
Q 039419 410 SFGNCTQLQ-MLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLIL 470 (1035)
Q Consensus 410 ~~~~l~~L~-~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 470 (1035)
+|.++++|+ .|++.+ +++.+.+.+|.++++|+.|+++.|+++.+.+.+|.++++|+.++.
T Consensus 268 aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 268 VFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp TTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred HhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 466667798 999988 788788899999999999999999999999999999999998864
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=8e-15 Score=166.71 Aligned_cols=271 Identities=11% Similarity=0.168 Sum_probs=197.6
Q ss_pred cccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEE
Q 039419 198 LSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTID 277 (1035)
Q Consensus 198 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 277 (1035)
...++.+.+.++ ++..-..+|.++ +|+.+.+..+ ++.+....|.+ .+|+.+.+.. .+....+.+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 355666666543 443445566664 6888888766 66566666766 4688887765 66666677888888888888
Q ss_pred ccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcE
Q 039419 278 LSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEA 357 (1035)
Q Consensus 278 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~ 357 (1035)
|.+|+++.+....|. ..+|+.+.|.++ +..+...+|.++++|+.+++..| ++.+. ..+|.+ .+|+.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~----------~~aF~~-~~L~~ 252 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIG----------QEAFRE-SGITT 252 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEEC----------TTTTTT-CCCSE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcc----------cccccc-CCccE
Confidence 888888866666776 578888888744 77677788888888888888764 44332 256666 67888
Q ss_pred EeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccC
Q 039419 358 VDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLAS 437 (1035)
Q Consensus 358 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 437 (1035)
++| .+.++.+....|.++++|+.+.+.+|.+... .+..+....|.++++|+.++|. |.++.+...+|.+
T Consensus 253 i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~---------~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~ 321 (401)
T 4fdw_A 253 VKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDD---------PEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGG 321 (401)
T ss_dssp EEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCC---------TTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTT
T ss_pred EEe-CCCccEEChhHhhCCCCCCEEEeCCccccCC---------cccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcC
Confidence 888 4556656677888888888888888776511 1123344467788888888888 4577677788888
Q ss_pred CCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCC-CCcEEEcCCCcCc
Q 039419 438 LTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCE-SLQSLDLSSNKLS 500 (1035)
Q Consensus 438 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 500 (1035)
+++|+.++|..| ++.+...+|.++ +|+.|++++|.+....+..|..++ +++.|++..|.+.
T Consensus 322 c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 322 NRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 899999999655 777778888888 899999999988877777788774 7888888877654
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=3.1e-15 Score=152.22 Aligned_cols=128 Identities=26% Similarity=0.302 Sum_probs=69.6
Q ss_pred eeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCc
Q 039419 419 MLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNK 498 (1035)
Q Consensus 419 ~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 498 (1035)
.+++++|+++ .+|..+. ++|++|+|++|+|+. +|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555555555 2333322 355666666666653 33555556666666666666655555556666666666666655
Q ss_pred CcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccc-cccccCCCcEEeccCCcCcccC
Q 039419 499 LSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLL-ALSGLDNLVSLNVSYNNFTGYL 575 (1035)
Q Consensus 499 l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~ls~N~l~~~~ 575 (1035)
|++ +.+..|..+++|++|+|++|+|+..+. .|..+++|+.|+|++|+|.+..
T Consensus 90 l~~-------------------------i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 90 LRC-------------------------IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCB-------------------------CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCE-------------------------eCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 552 223334445555555555555555443 3555666666666666665533
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=1.5e-15 Score=151.22 Aligned_cols=134 Identities=22% Similarity=0.217 Sum_probs=82.8
Q ss_pred CccceeecCCCccC-CCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEE
Q 039419 415 TQLQMLNLSNNTLG-GTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLD 493 (1035)
Q Consensus 415 ~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 493 (1035)
++|++|+|++|+++ +.+|..+..+++|++|+|++|++++. ..|..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34555555555555 34455555555566666666655544 4455555555555555555544555455555555555
Q ss_pred cCCCcCcCccchhhhhhccCcceeeccCccCCCCC-CccccCCccccEEeccCCcccCccc----cccccCCCcEEeccC
Q 039419 494 LSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAI-PPQISALNKLSILDLSHNKLGGDLL----ALSGLDNLVSLNVSY 568 (1035)
Q Consensus 494 Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~~L~ls~ 568 (1035)
|++|+|+ +.. +..+..+++|++|+|++|++++.+. .+..+++|+.|++++
T Consensus 102 Ls~N~l~-------------------------~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 102 LSGNKLK-------------------------DISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp CBSSSCC-------------------------SSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ccCCccC-------------------------cchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 5555554 221 1456677888888888888887765 677888888888888
Q ss_pred CcCcccC
Q 039419 569 NNFTGYL 575 (1035)
Q Consensus 569 N~l~~~~ 575 (1035)
|.+...+
T Consensus 157 n~~~~~~ 163 (168)
T 2ell_A 157 REDQEAP 163 (168)
T ss_dssp TTSCBCC
T ss_pred CChhhcc
Confidence 8877543
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.56 E-value=5.4e-15 Score=147.11 Aligned_cols=131 Identities=21% Similarity=0.175 Sum_probs=58.6
Q ss_pred ceEEEEecccccc-ccCcccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhc
Q 039419 176 SLLVVGLADTKVA-GSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLL 254 (1035)
Q Consensus 176 ~L~~L~l~~~~~~-~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 254 (1035)
+|+.|++++|.+. +.+|..+..+++|++|++++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+++|+.|++
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3444444444443 34444445555555555555555432 44445555555555555555434444444444444444
Q ss_pred ccccccccC-CccccCCCCCcEEEccCccCCCCCC---ccccCCCCCcEEEccCCccc
Q 039419 255 WQNNFDGAI-PEEIGNCKSLKTIDLSLNFFSGSLP---QSFGNLSSLEELMLSNNNIS 308 (1035)
Q Consensus 255 ~~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~N~l~ 308 (1035)
++|++++.. +..+..+++|+.|++++|.+++..+ ..|..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 444444321 1334444444444444444443222 23444444444444444443
No 384
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=3.7e-14 Score=161.26 Aligned_cols=128 Identities=11% Similarity=0.114 Sum_probs=65.8
Q ss_pred ccceeecCCCccCCCCcccccCCCCccEEEcCCCccC-----CCCchhccCccccchhhccCCcccccCccccCCCCCCc
Q 039419 416 QLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFV-----GLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQ 490 (1035)
Q Consensus 416 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 490 (1035)
+|+.+.| .|.++.+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. |.++.+...+|.++++|+
T Consensus 249 ~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 249 GITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVT 326 (401)
T ss_dssp CCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCC
T ss_pred CccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCcc
Confidence 3444444 22333334444555555555555444433 2344455555555555555 234444445555555555
Q ss_pred EEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCcc-ccccccC-CCcEEeccC
Q 039419 491 SLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDL-LALSGLD-NLVSLNVSY 568 (1035)
Q Consensus 491 ~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l~-~L~~L~ls~ 568 (1035)
.|+|..| ++ .+.+.+|.++ +|+.|++++|.+.... ..|.+++ +++.|++..
T Consensus 327 ~l~lp~~-l~-------------------------~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~ 379 (401)
T 4fdw_A 327 QLTIPAN-VT-------------------------QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPA 379 (401)
T ss_dssp EEEECTT-CC-------------------------EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECG
T ss_pred EEEECcc-cc-------------------------EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCH
Confidence 5555333 22 2344556666 6777777777665533 4566663 567777776
Q ss_pred CcCc
Q 039419 569 NNFT 572 (1035)
Q Consensus 569 N~l~ 572 (1035)
|.+.
T Consensus 380 ~~~~ 383 (401)
T 4fdw_A 380 ESVE 383 (401)
T ss_dssp GGHH
T ss_pred HHHH
Confidence 6554
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=5e-15 Score=144.08 Aligned_cols=128 Identities=23% Similarity=0.303 Sum_probs=81.3
Q ss_pred CccceeecCCCccC-CCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEE
Q 039419 415 TQLQMLNLSNNTLG-GTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLD 493 (1035)
Q Consensus 415 ~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 493 (1035)
++|+.|++++|+++ +.+|..+..+++|++|++++|++++. ..|..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666666 45566666666777777777766655 5566666666666666666655566555666666666
Q ss_pred cCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccc----cccccCCCcEEeccC
Q 039419 494 LSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLL----ALSGLDNLVSLNVSY 568 (1035)
Q Consensus 494 Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~~L~ls~ 568 (1035)
|++|++++ +| .+..+..+++|++|+|++|++++.+. .+..+++|+.|++++
T Consensus 95 ls~N~i~~-~~-----------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKD-LS-----------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCS-HH-----------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCC-hH-----------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 66666652 11 12345556677777777777766554 566777777777653
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.54 E-value=1.4e-14 Score=147.33 Aligned_cols=125 Identities=25% Similarity=0.345 Sum_probs=63.5
Q ss_pred ceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCcc
Q 039419 203 SLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNF 282 (1035)
Q Consensus 203 ~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 282 (1035)
.+++++|.++ .+|..+. ++|+.|+|++|.++ .+|..|..+++|+.|+|++|++++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4445555554 4444332 35555555555555 344455555555555555555554444455555555555555555
Q ss_pred CCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchh
Q 039419 283 FSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQI 331 (1035)
Q Consensus 283 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i 331 (1035)
|++..+..|.++++|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 5554444555555555555555555544444444444444444444443
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=3.7e-14 Score=142.38 Aligned_cols=133 Identities=26% Similarity=0.316 Sum_probs=107.9
Q ss_pred CcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCccc
Q 039419 355 LEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSS 434 (1035)
Q Consensus 355 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 434 (1035)
.+.+++++|.++. +|..+ .++|++|++++|++++..+..+. ++++|++|+|++|+|++..+..
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~--------------~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFD--------------KLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTT--------------TCTTCSEEECCSSCCCCCCTTT
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhc--------------CcccccEEECCCCcceEeChhH
Confidence 4678888888873 34333 26788888888888866555443 4466888999999998777777
Q ss_pred ccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccc
Q 039419 435 LASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIP 504 (1035)
Q Consensus 435 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 504 (1035)
|..+++|++|+|++|+|++.++..|..+++|+.|++++|+|++..+..|..+++|++|+|++|.+.+..|
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8899999999999999998888888999999999999999997777778889999999999999986655
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=4.2e-15 Score=149.12 Aligned_cols=134 Identities=17% Similarity=0.201 Sum_probs=80.5
Q ss_pred CCCCccceeecCCCccCCCCcccccCCC-CccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCc
Q 039419 412 GNCTQLQMLNLSNNTLGGTLPSSLASLT-RLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQ 490 (1035)
Q Consensus 412 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 490 (1035)
.++.+|++|+|++|+++.. +. +..+. +|++|+|++|+|+++ ..|..+++|++|+|++|+|++..+..|..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 3445566666666666632 32 33333 666666666666654 4555666666666666666644434445666666
Q ss_pred EEEcCCCcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccc----cccccCCCcEEec
Q 039419 491 SLDLSSNKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLL----ALSGLDNLVSLNV 566 (1035)
Q Consensus 491 ~L~Ls~N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~~L~l 566 (1035)
+|+|++|+|+ .+|. ...+..+++|+.|+|++|++...+. .+..+++|+.|++
T Consensus 92 ~L~L~~N~i~-~~~~-----------------------~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 92 ELILTNNSLV-ELGD-----------------------LDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp EEECCSCCCC-CGGG-----------------------GGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred EEECCCCcCC-cchh-----------------------hHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCC
Confidence 6666666664 2221 0145566777777777777776654 3777788888888
Q ss_pred cCCcCcc
Q 039419 567 SYNNFTG 573 (1035)
Q Consensus 567 s~N~l~~ 573 (1035)
++|.+..
T Consensus 148 ~~n~~~~ 154 (176)
T 1a9n_A 148 QKVKLKE 154 (176)
T ss_dssp EECCHHH
T ss_pred CcCCHHH
Confidence 8887654
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.51 E-value=2e-14 Score=139.73 Aligned_cols=124 Identities=21% Similarity=0.203 Sum_probs=62.4
Q ss_pred EEEEEecCCccc-ccCCcCCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEec
Q 039419 32 VTEINIQSIELE-LPFPSNLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILN 110 (1035)
Q Consensus 32 v~~l~~~~~~~~-~~~~~~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~ 110 (1035)
++.|+++++++. +.+|..+..+++|++|+|++|.+++. +.++.+++|++|+|++|.+++.+|..++.+++|++|+|+
T Consensus 19 l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls 96 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96 (149)
T ss_dssp CSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECT
T ss_pred CeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECC
Confidence 445555555554 44555555555555555555555532 445555555555555555554455544455555555555
Q ss_pred ccCCCCC-CchhhhhhccccceeccccccCCCCc---hhhccccccceeec
Q 039419 111 SNQLTGE-IPKELGACIKLKNLLLFDNYLSGNLP---VELGKLVNLEVIRA 157 (1035)
Q Consensus 111 ~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p---~~l~~l~~L~~L~l 157 (1035)
+|++++. .|..+..+++|++|++++|.+++..+ ..++.+++|++|++
T Consensus 97 ~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 97 GNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp TSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 5555521 12445555555555555555543322 24455555555544
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.50 E-value=6.1e-14 Score=140.78 Aligned_cols=134 Identities=21% Similarity=0.256 Sum_probs=90.9
Q ss_pred cceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCC
Q 039419 417 LQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSS 496 (1035)
Q Consensus 417 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 496 (1035)
.+.+++++|+++. +|..+. ++|+.|++++|+++++.+..|..+++|++|++++|+|++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4566777777763 333322 4677777777777766666677777777777777777766666667777777777777
Q ss_pred CcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCcccc-ccccCCCcEEeccCCcCcccC
Q 039419 497 NKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLA-LSGLDNLVSLNVSYNNFTGYL 575 (1035)
Q Consensus 497 N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~ls~N~l~~~~ 575 (1035)
|+|++ ..+..|..+++|++|+|++|++++.+.. +..+++|+.|++++|++++.+
T Consensus 86 N~l~~-------------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQS-------------------------LPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCC-------------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccc-------------------------cCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 77662 2333455667777777777777766643 566788888888888888766
Q ss_pred CCh
Q 039419 576 PDS 578 (1035)
Q Consensus 576 p~~ 578 (1035)
|..
T Consensus 141 ~~l 143 (177)
T 2o6r_A 141 PRI 143 (177)
T ss_dssp HHH
T ss_pred ccH
Confidence 643
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.50 E-value=2.5e-13 Score=155.10 Aligned_cols=329 Identities=16% Similarity=0.141 Sum_probs=148.3
Q ss_pred ccccccccccceeecccccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCC
Q 039419 193 ASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKS 272 (1035)
Q Consensus 193 ~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 272 (1035)
.+|.++++|+++.+..+ ++.....+|.++++|+.++|..+ ++.+....|.++.+|+.+.+..+ +......+|.+...
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 34444444444444322 33233344455555555555433 33233344445555554444322 22233344444433
Q ss_pred CcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCC
Q 039419 273 LKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANC 352 (1035)
Q Consensus 273 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l 352 (1035)
+........ ......+|.++++|+.+.+.++. ..+....|.++.+|+.+.+..| ++.+ -..+|.++
T Consensus 142 ~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I----------~~~~F~~~ 207 (394)
T 4fs7_A 142 KEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKII----------RDYCFAEC 207 (394)
T ss_dssp SEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEE----------CTTTTTTC
T ss_pred cccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEe----------Cchhhccc
Confidence 322222221 11233456666666666665443 2245555666666666666544 2222 12455666
Q ss_pred CCCcEEeccCcCCCCCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCc
Q 039419 353 RSLEAVDLSHNALTGSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLP 432 (1035)
Q Consensus 353 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~ 432 (1035)
..|+.+.+..+... +...+....+|+.+.+..+ ++ .+....|.++..|+.+.+..+... +..
T Consensus 208 ~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~--------------~i~~~~f~~~~~l~~~~~~~~~~~-i~~ 269 (394)
T 4fs7_A 208 ILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FT--------------ELGKSVFYGCTDLESISIQNNKLR-IGG 269 (394)
T ss_dssp TTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CC--------------EECSSTTTTCSSCCEEEECCTTCE-ECS
T ss_pred cccceeecCCCceE--eehhhcccCCCceEEECCC-ce--------------ecccccccccccceeEEcCCCcce-eec
Confidence 66666665554432 2233334455555554322 11 122223444455555555554333 444
Q ss_pred ccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcCccchhhhhhcc
Q 039419 433 SSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSGKIPVELFEIEG 512 (1035)
Q Consensus 433 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 512 (1035)
..|.....++.+.+..+.+. ...|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++ .|+...|..-.
T Consensus 270 ~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~ 343 (394)
T 4fs7_A 270 SLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCT 343 (394)
T ss_dssp CTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCT
T ss_pred cccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCC
Confidence 45555555555555544322 234555555555555443 43344455555555665555433 33 23222222111
Q ss_pred CcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEE
Q 039419 513 LDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSL 564 (1035)
Q Consensus 513 l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L 564 (1035)
.+..+++..| ++.+...+|.++.+|+.++|..| ++....+|.++++|+.+
T Consensus 344 ~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 344 SLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LEQYRYDFEDTTKFKWI 393 (394)
T ss_dssp TCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GGGGGGGBCTTCEEEEE
T ss_pred CCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CEEhhheecCCCCCcEE
Confidence 1112333222 33334455666666666666543 33223455555555543
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.48 E-value=3.2e-13 Score=154.29 Aligned_cols=269 Identities=16% Similarity=0.105 Sum_probs=122.9
Q ss_pred cCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchh
Q 039419 66 LTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVE 145 (1035)
Q Consensus 66 l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~ 145 (1035)
++.....+|.++++|+.+.|.. .++.....+|.++.+|+.++|..+ ++......+..+.+|+.+.+..+ +.......
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 4433344566666677776653 344333445666666666666543 33223334555666665554433 11112222
Q ss_pred hccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCccccccCcCC
Q 039419 146 LGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQIGNCSEL 225 (1035)
Q Consensus 146 l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L 225 (1035)
|.....++....... ......+|.++++|+.+.+.++... .....|.++.+|
T Consensus 136 F~~~~~~~~~~~~~~---------------------------~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L 187 (394)
T 4fs7_A 136 FKGCDFKEITIPEGV---------------------------TVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKL 187 (394)
T ss_dssp TTTCCCSEEECCTTC---------------------------CEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTC
T ss_pred eecccccccccCccc---------------------------cccchhhhcccCCCcEEecCCccce-eccccccCCCCc
Confidence 322222111111111 1112234555555555555443222 334445555555
Q ss_pred ceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCC
Q 039419 226 VDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNN 305 (1035)
Q Consensus 226 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 305 (1035)
+.+.+..| ++.+....|.+...|+.+.+..+... +.+.+....+|+.+.+..+. +......|.++..|+.+.+..+
T Consensus 188 ~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~ 263 (394)
T 4fs7_A 188 KSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNN 263 (394)
T ss_dssp CBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCT
T ss_pred eEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCC
Confidence 55555544 33233444555555555544433322 12223334556666554432 2234455666666666666555
Q ss_pred ccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCCCCCCcccCcccceEec
Q 039419 306 NISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGSLHPGLFQLQNLTKLLL 384 (1035)
Q Consensus 306 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 384 (1035)
... +....|.....++.+.+..+.|. ..+|..+.+|+.+.+.++ ++.+....|.++.+|+.+.|
T Consensus 264 ~~~-i~~~~F~~~~~l~~~~~~~~~i~-------------~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~l 327 (394)
T 4fs7_A 264 KLR-IGGSLFYNCSGLKKVIYGSVIVP-------------EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDL 327 (394)
T ss_dssp TCE-ECSCTTTTCTTCCEEEECSSEEC-------------TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECC
T ss_pred cce-eeccccccccccceeccCceeec-------------cccccccccccccccccc-cceechhhhcCCCCCCEEEe
Confidence 433 44455555555555554443322 124455555555555433 33233334444444444444
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.45 E-value=3.8e-14 Score=142.06 Aligned_cols=134 Identities=14% Similarity=0.142 Sum_probs=86.7
Q ss_pred ccccccccceeecccccccCCccccccCc-CCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCC
Q 039419 195 LGKLSKLQSLSVYTTMLSGEIPPQIGNCS-ELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSL 273 (1035)
Q Consensus 195 l~~l~~L~~L~l~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 273 (1035)
+.++++|++|++++|.++ .+|. +..+. +|+.|+|++|.+++. ..|..+++|++|++++|++++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 445666666666666666 3443 33433 677777777777643 456666777777777777765544545677777
Q ss_pred cEEEccCccCCCCCCc--cccCCCCCcEEEccCCccccCCCC----cccCCCccceeccccchhhhh
Q 039419 274 KTIDLSLNFFSGSLPQ--SFGNLSSLEELMLSNNNISGSIPP----VLSNATSLLQLQLDTNQISVF 334 (1035)
Q Consensus 274 ~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~i~~l 334 (1035)
++|+|++|+|+ .+|. .+..+++|+.|++++|.+.. .|. .+..+++|+.|++++|.+...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 77777777776 3444 66777777777777777763 343 366777777777777766543
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.43 E-value=2e-15 Score=154.61 Aligned_cols=155 Identities=22% Similarity=0.247 Sum_probs=106.4
Q ss_pred CCCCcccceEeecCcccCCCCCC------CCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhh
Q 039419 50 LSSLSFLQKLIISGSNLTGPISP------DLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELG 123 (1035)
Q Consensus 50 ~~~l~~L~~L~L~~~~l~~~~~~------~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~ 123 (1035)
+.....++.++++++.++|.+|. .++.+++|++|+|++|++++ +| .+..+++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34455667777777777777666 67777788888888887773 66 7777888888888888877 6777777
Q ss_pred hhccccceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCc-cccccccccc
Q 039419 124 ACIKLKNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLP-ASLGKLSKLQ 202 (1035)
Q Consensus 124 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p-~~l~~l~~L~ 202 (1035)
.+++|++|++++|++++ +| .++.+++|++|++++|. +.+..+ ..+..+++|+
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~-------------------------i~~~~~~~~l~~l~~L~ 143 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNK-------------------------ITNWGEIDKLAALDKLE 143 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEE-------------------------CCCHHHHHHHTTTTTCS
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCc-------------------------CCchhHHHHHhcCCCCC
Confidence 77788888888887763 44 56666777766666664 322111 3566677777
Q ss_pred ceeecccccccCCccc----------cccCcCCceEEecCCcCC
Q 039419 203 SLSVYTTMLSGEIPPQ----------IGNCSELVDLFLYENDLS 236 (1035)
Q Consensus 203 ~L~l~~n~l~~~~p~~----------l~~l~~L~~L~L~~n~l~ 236 (1035)
+|++++|.+.+..|.. +..+++|+.|+ +|.++
T Consensus 144 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 144 DLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 7777777776554442 67778888776 56555
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.41 E-value=6.1e-15 Score=151.08 Aligned_cols=153 Identities=21% Similarity=0.254 Sum_probs=112.8
Q ss_pred CCCCCceeeCCCCCCCCCCCh------hhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhccc
Q 039419 76 DCTQLTTIDVSSNSLVGGVPS------SIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELGKL 149 (1035)
Q Consensus 76 ~l~~L~~L~ls~n~l~~~~p~------~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l 149 (1035)
....++.++++.+.+.+.+|. .++.+++|++|+|++|++++ +| .+..+++|++|++++|.++ .+|..+..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 345666677777766666665 77777788888888877774 66 7777777888888777776 566666655
Q ss_pred cccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecccccccCCc-cccccCcCCceE
Q 039419 150 VNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYTTMLSGEIP-PQIGNCSELVDL 228 (1035)
Q Consensus 150 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L 228 (1035)
++|++|++++| ++.+ +| .+..+++|++|++++|.+++..+ ..+..+++|+.|
T Consensus 93 ~~L~~L~L~~N-------------------------~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 93 DTLEELWISYN-------------------------QIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp HHCSEEEEEEE-------------------------ECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEE
T ss_pred CcCCEEECcCC-------------------------cCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEE
Confidence 66666655555 4543 34 68899999999999999984322 478999999999
Q ss_pred EecCCcCCCCCCh----------hhhcccchhHhhccccccc
Q 039419 229 FLYENDLSGSLPR----------ELGKLQKLEKMLLWQNNFD 260 (1035)
Q Consensus 229 ~L~~n~l~~~~~~----------~l~~l~~L~~L~l~~n~l~ 260 (1035)
++++|.+++..|. .+..+++|+.|+ +|.++
T Consensus 146 ~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 146 LLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 9999999866554 378899999886 56655
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=9.6e-13 Score=130.78 Aligned_cols=81 Identities=28% Similarity=0.399 Sum_probs=48.7
Q ss_pred cceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCC
Q 039419 417 LQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSS 496 (1035)
Q Consensus 417 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 496 (1035)
.+.|++++|+++. +|..+. ++|++|+|++|+|+++.|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4556666666663 444332 5666666666666666666666666666666666666655555556666666666666
Q ss_pred CcCc
Q 039419 497 NKLS 500 (1035)
Q Consensus 497 N~l~ 500 (1035)
|+|+
T Consensus 88 N~l~ 91 (170)
T 3g39_A 88 NQLK 91 (170)
T ss_dssp SCCC
T ss_pred CccC
Confidence 6555
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=1.7e-12 Score=129.48 Aligned_cols=80 Identities=28% Similarity=0.428 Sum_probs=47.5
Q ss_pred ceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCC
Q 039419 418 QMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSN 497 (1035)
Q Consensus 418 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 497 (1035)
+.+++++|+++ .+|..+. ++|++|+|++|+|++++|..|..+++|+.|+|++|+|+++.+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666665 3444332 56666666666666666666666666666666666666554445556666666666666
Q ss_pred cCc
Q 039419 498 KLS 500 (1035)
Q Consensus 498 ~l~ 500 (1035)
+|+
T Consensus 92 ~l~ 94 (174)
T 2r9u_A 92 HLK 94 (174)
T ss_dssp CCC
T ss_pred ccc
Confidence 555
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.35 E-value=2.2e-12 Score=128.20 Aligned_cols=88 Identities=27% Similarity=0.327 Sum_probs=76.1
Q ss_pred CccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEc
Q 039419 415 TQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDL 494 (1035)
Q Consensus 415 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 494 (1035)
++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 45788888888888777888888899999999999999888888889999999999999998777778999999999999
Q ss_pred CCCcCcCc
Q 039419 495 SSNKLSGK 502 (1035)
Q Consensus 495 s~N~l~~~ 502 (1035)
++|+++..
T Consensus 110 ~~N~~~c~ 117 (170)
T 3g39_A 110 LNNPWDCA 117 (170)
T ss_dssp CSSCBCTT
T ss_pred CCCCCCCC
Confidence 99999843
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.33 E-value=4.3e-12 Score=126.52 Aligned_cols=92 Identities=24% Similarity=0.275 Sum_probs=75.5
Q ss_pred CccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEc
Q 039419 415 TQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDL 494 (1035)
Q Consensus 415 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 494 (1035)
++|++|+|++|+|++..|..|.++++|++|+|++|+|+++++..|..+++|+.|+|++|+|++..+..|..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 35778888888888777888888888888888888888877777888889999999999998766667888999999999
Q ss_pred CCCcCcCccchhh
Q 039419 495 SSNKLSGKIPVEL 507 (1035)
Q Consensus 495 s~N~l~~~~p~~~ 507 (1035)
++|.+. ..+..+
T Consensus 113 ~~N~~~-c~~~~~ 124 (174)
T 2r9u_A 113 YNNPWD-CECRDI 124 (174)
T ss_dssp CSSCBC-TTBGGG
T ss_pred CCCCcc-cccccH
Confidence 999987 444433
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=5.2e-11 Score=135.85 Aligned_cols=327 Identities=15% Similarity=0.226 Sum_probs=193.0
Q ss_pred Ccccccccc-cccceeecccccccCCccccccCcCCceEEecCCc---CCCCCChhhhcccchhHhhcccccccccCCcc
Q 039419 191 LPASLGKLS-KLQSLSVYTTMLSGEIPPQIGNCSELVDLFLYEND---LSGSLPRELGKLQKLEKMLLWQNNFDGAIPEE 266 (1035)
Q Consensus 191 ~p~~l~~l~-~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~---l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~ 266 (1035)
...+|.+.+ .|+.+.+..+ ++.....+|.++.+|+.+.+..|. ++.+....|....+|+.+.+..+ ++.....+
T Consensus 55 g~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~a 132 (394)
T 4gt6_A 55 GDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEA 132 (394)
T ss_dssp CTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTT
T ss_pred CHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhh
Confidence 344565553 4777777654 554556677788888888887663 55455667777777777777544 44455667
Q ss_pred ccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCC
Q 039419 267 IGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIP 346 (1035)
Q Consensus 267 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p 346 (1035)
|.++.+|+.+.+..+.. .+....|..+.+|+.+.+.++ +..+...+|.+ ..|+.+.+..+-.. .-.
T Consensus 133 F~~c~~L~~i~lp~~~~-~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-----------i~~ 198 (394)
T 4gt6_A 133 FHHCEELDTVTIPEGVT-SVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-----------IGT 198 (394)
T ss_dssp TTTCTTCCEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-----------ECT
T ss_pred hhhhcccccccccceee-eecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-----------ccc
Confidence 88888888888875533 366677888888888888765 44455666654 56777777654322 123
Q ss_pred cCCCCCCCCcEEeccCcCCCCCCCCCcccC-cccceEeccc---ccccc-CCCCCCCCCCcceeEeeeccCCCCccceee
Q 039419 347 STLANCRSLEAVDLSHNALTGSLHPGLFQL-QNLTKLLLIS---NGISG-LIPPEIGNCSSLIRLRLMSFGNCTQLQMLN 421 (1035)
Q Consensus 347 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~---N~i~~-~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~ 421 (1035)
.+|.++.+|.......+.... ....+... .......... ..+.. .+| .+++.+...+|.++..|+.+.
T Consensus 199 ~af~~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip------~~v~~i~~~aF~~c~~L~~i~ 271 (394)
T 4gt6_A 199 NAFSECFALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIP------NGVARIETHAFDSCAYLASVK 271 (394)
T ss_dssp TTTTTCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECC------TTEEEECTTTTTTCSSCCEEE
T ss_pred chhhhccccceeccccccccc-ccceeecccccccccccccccccccceEEcC------CcceEcccceeeecccccEEe
Confidence 567777788877776665542 22222211 1111100000 00000 011 123344445677777777777
Q ss_pred cCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcCcC
Q 039419 422 LSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLSG 501 (1035)
Q Consensus 422 L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 501 (1035)
+.++..+ +...+|.+.+.|+.+.+. +.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.|..+ ++
T Consensus 272 lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~- 346 (394)
T 4gt6_A 272 MPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT- 346 (394)
T ss_dssp CCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-
T ss_pred cccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-
Confidence 7665443 555667777777777775 4455566667777777777777654 55455666777777777766543 33
Q ss_pred ccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCccccccccCCCcEEeccCCcC
Q 039419 502 KIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDLLALSGLDNLVSLNVSYNNF 571 (1035)
Q Consensus 502 ~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ls~N~l 571 (1035)
.+...+|.++.+|+.+++.+|.... ..+.....|+.+.+..|.+
T Consensus 347 ------------------------~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 347 ------------------------KIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp ------------------------BCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC----------
T ss_pred ------------------------EEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCCCE
Confidence 2445567778888888888775432 3556667777777766654
No 401
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=1.8e-11 Score=131.40 Aligned_cols=146 Identities=12% Similarity=0.006 Sum_probs=113.7
Q ss_pred HHHHhccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCceee
Q 039419 682 EQVLKCLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKNIVR 760 (1035)
Q Consensus 682 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~ 760 (1035)
......|.....++.|+++.||++... ++.+++|+........ ...+.+|+.+++.+. +..+.+
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~--------------~~~~~~E~~~l~~l~~~~~vP~ 74 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT--------------TYDVEREKDMMLWLEGKLPVPK 74 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS--------------TTCHHHHHHHHHHHTTTSCCCC
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC--------------HHHHHHHHHHHHHHhcCCCCCe
Confidence 455677877788888999999999765 6889999986421111 234889999999984 678889
Q ss_pred EEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccC----------------------
Q 039419 761 FLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDC---------------------- 818 (1035)
Q Consensus 761 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------- 818 (1035)
+++++.+.+..|+||||++|.++.+.+.. ......++.+++++++.||+..
T Consensus 75 v~~~~~~~~~~~lv~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (263)
T 3tm0_A 75 VLHFERHDGWSNLLMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLN 147 (263)
T ss_dssp EEEEEEETTEEEEEEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHH
T ss_pred EEEEEecCCceEEEEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHh
Confidence 99999988899999999999999876321 1223467889999999999810
Q ss_pred ----------------------------------CCCeeccCCCcccEEEcCCCceEEeeccCcc
Q 039419 819 ----------------------------------VPPIVHRDIKANNILIGPEFEPYIADFGLAK 849 (1035)
Q Consensus 819 ----------------------------------~~~ivHrDikp~NIll~~~~~~kl~DFG~a~ 849 (1035)
.+.++|+|++|.||+++.++.+.|+||+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 148 NDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1369999999999999876666799998764
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.21 E-value=1.9e-11 Score=137.00 Aligned_cols=106 Identities=25% Similarity=0.264 Sum_probs=78.3
Q ss_pred eeecCCC-ccCCCCcccccCCCCccEEEcCC-CccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCC
Q 039419 419 MLNLSNN-TLGGTLPSSLASLTRLQVLDISV-NQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSS 496 (1035)
Q Consensus 419 ~L~L~~N-~l~~~~~~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 496 (1035)
.++++++ +|++ +|. +..+++|+.|+|++ |+|.++++..|..+++|+.|+|++|+|++..|..|..+++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 7774 566 88888888888885 888887778888888888888888888887777888888888888888
Q ss_pred CcCcCccchhhhhhccCcceeeccCccCCCCCCccccCCccccEEeccCCcccCcc
Q 039419 497 NKLSGKIPVELFEIEGLDISLNLSWNALSGAIPPQISALNKLSILDLSHNKLGGDL 552 (1035)
Q Consensus 497 N~l~~~~p~~~~~~~~l~~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 552 (1035)
|+|+ .+|.. .|..++ |+.|+|++|+|.++.
T Consensus 90 N~l~-~~~~~------------------------~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 90 NALE-SLSWK------------------------TVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp SCCS-CCCST------------------------TTCSCC-CCEEECCSSCCCCCG
T ss_pred Cccc-eeCHH------------------------HcccCC-ceEEEeeCCCccCCC
Confidence 8887 33322 233333 777777777777654
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=1.6e-13 Score=154.45 Aligned_cols=42 Identities=24% Similarity=0.259 Sum_probs=19.5
Q ss_pred CCCCCCCcEEeccCcCCCCC----CCCCcccCcccceEeccccccc
Q 039419 349 LANCRSLEAVDLSHNALTGS----LHPGLFQLQNLTKLLLISNGIS 390 (1035)
Q Consensus 349 l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~i~ 390 (1035)
+...++|++|+|++|.|+.. +...+...++|++|+|++|.|+
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 34444555555555555421 1122223455555555555554
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.17 E-value=4.9e-13 Score=150.46 Aligned_cols=190 Identities=18% Similarity=0.204 Sum_probs=84.9
Q ss_pred CCCceeeCCCCCCCCCCChhhhcc-----ccccceEecccCCCCCCchhh-hhhccccceeccccccCCCCchhhccccc
Q 039419 78 TQLTTIDVSSNSLVGGVPSSIGKL-----INLQDLILNSNQLTGEIPKEL-GACIKLKNLLLFDNYLSGNLPVELGKLVN 151 (1035)
Q Consensus 78 ~~L~~L~ls~n~l~~~~p~~i~~l-----~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 151 (1035)
+.|++|+|++|.++......+..+ .+|++|+|++|.+++.....+ ..+++|++|+|++|.+.+.....++..
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~-- 149 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDL-- 149 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHH--
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHH--
Confidence 455666666666553333333333 456666666666553333333 234555666666665543222222210
Q ss_pred cceeecCCCcccCCCCCCcC-CCccceEEEEecccccccc----CcccccccccccceeecccccccC----CccccccC
Q 039419 152 LEVIRAGGNKDIAGKIPYEI-GDCQSLLVVGLADTKVAGS----LPASLGKLSKLQSLSVYTTMLSGE----IPPQIGNC 222 (1035)
Q Consensus 152 L~~L~l~~n~~~~~~~~~~~-~~l~~L~~L~l~~~~~~~~----~p~~l~~l~~L~~L~l~~n~l~~~----~p~~l~~l 222 (1035)
+ ...++|+.|+|++|.+++. ++..+..+++|++|+|++|.+.+. ++..+...
T Consensus 150 -------------------L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 150 -------------------LLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp -------------------HHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred -------------------HHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 0 0112333333333333321 223334445555555555554432 13333444
Q ss_pred cCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCC-----C
Q 039419 223 SELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSS-----L 297 (1035)
Q Consensus 223 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-----L 297 (1035)
++|+.|+|++|.|++.... .++..+...++|++|+|++|.|++.....+..+.. |
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~--------------------~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L 270 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAAL--------------------ALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGA 270 (372)
T ss_dssp SCCCEEECCSSCCCHHHHH--------------------HHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------C
T ss_pred CCcCeEECCCCCCCHHHHH--------------------HHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccc
Confidence 4555555555544421111 12233445567777777777776544444433321 5
Q ss_pred cEEE--ccCCccc
Q 039419 298 EELM--LSNNNIS 308 (1035)
Q Consensus 298 ~~L~--L~~N~l~ 308 (1035)
+.+. +..|.+.
T Consensus 271 ~~l~~ll~~~~~~ 283 (372)
T 3un9_A 271 RVVVSLTEGTAVS 283 (372)
T ss_dssp EEECCCC----CH
T ss_pred hhhHhhhcCCccC
Confidence 5555 5555554
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.17 E-value=2.4e-10 Score=130.35 Aligned_cols=317 Identities=13% Similarity=0.174 Sum_probs=147.2
Q ss_pred hhhcccc-ccceeecCCCcccCCCCCCcCCCccceEEEEecccc---ccccCcccccccccccceeecccccccCCcccc
Q 039419 144 VELGKLV-NLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTK---VAGSLPASLGKLSKLQSLSVYTTMLSGEIPPQI 219 (1035)
Q Consensus 144 ~~l~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~---~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l 219 (1035)
..|.+.+ .|+.+.+..+ +.......+.++++|+.+.+..+. ++.....+|....+|+.+.+..+ ++.....+|
T Consensus 57 ~aF~~~~~~L~sI~iP~s--vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT--VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTCCSCCCEEEECTT--CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred hhccCCCCcCEEEEECCC--eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 3444443 4666666543 222334456666666666665542 44444455666666666655544 232344455
Q ss_pred ccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcE
Q 039419 220 GNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEE 299 (1035)
Q Consensus 220 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 299 (1035)
..+.+|+.+.+..+. ..+....|.....|+.+.+..+ +......+|.+ .+|+.+.+..+-.. ....+|.++.+|..
T Consensus 134 ~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~ 209 (394)
T 4gt6_A 134 HHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALST 209 (394)
T ss_dssp TTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCE
T ss_pred hhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccce
Confidence 666666666665432 2244445555555555555433 33233333432 45666665544333 44455555566665
Q ss_pred EEccCCccccCCCCcccCC-------------CccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCC
Q 039419 300 LMLSNNNISGSIPPVLSNA-------------TSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALT 366 (1035)
Q Consensus 300 L~L~~N~l~~~~~~~~~~l-------------~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 366 (1035)
.....+.........+... ..+..+.+. +.+...-..+|.++.+|+.+.+.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-----------~~v~~i~~~aF~~c~~L~~i~lp~~~~~ 278 (394)
T 4gt6_A 210 ITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-----------NGVARIETHAFDSCAYLASVKMPDSVVS 278 (394)
T ss_dssp EEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-----------TTEEEECTTTTTTCSSCCEEECCTTCCE
T ss_pred ecccccccccccceeecccccccccccccccccccceEEcC-----------CcceEcccceeeecccccEEecccccce
Confidence 5554444331111111100 011111111 0111111234555555665555544332
Q ss_pred CCCCCCcccCcccceEeccccccccCCCCCCCCCCcceeEeeeccCCCCccceeecCCCccCCCCcccccCCCCccEEEc
Q 039419 367 GSLHPGLFQLQNLTKLLLISNGISGLIPPEIGNCSSLIRLRLMSFGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDI 446 (1035)
Q Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 446 (1035)
+....|.++.+|+.+.+. +.++ .+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+
T Consensus 279 -I~~~aF~~c~~L~~i~l~-~~i~--------------~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 279 -IGTGAFMNCPALQDIEFS-SRIT--------------ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp -ECTTTTTTCTTCCEEECC-TTCC--------------EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred -ecCcccccccccccccCC-Cccc--------------ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 334445555555555553 2222 222234555555666666543 44444556666666666666
Q ss_pred CCCccCCCCchhccCccccchhhccCCcccccCccccCCCCCCcEEEcCCCcC
Q 039419 447 SVNQFVGLIPESFGQLASLNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKL 499 (1035)
Q Consensus 447 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 499 (1035)
..+ ++.+...+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 543 554555666666666666666654431 2345555666666555543
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.14 E-value=2.8e-11 Score=135.63 Aligned_cols=108 Identities=22% Similarity=0.206 Sum_probs=86.9
Q ss_pred ccceeEEeCCCCcEEEEEecCCcccccCCcCCCCCcccceEeecC-cccCCCCCCCCCCCCCCceeeCCCCCCCCCCChh
Q 039419 19 CKWSHITCSPQNFVTEINIQSIELELPFPSNLSSLSFLQKLIISG-SNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSS 97 (1035)
Q Consensus 19 c~w~gi~c~~~~~v~~l~~~~~~~~~~~~~~~~~l~~L~~L~L~~-~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~ 97 (1035)
|.|.+|.|+..+ ++. .+|. +..+++|++|+|++ |.|++..+..|+.|++|++|+|++|+|++..|..
T Consensus 8 C~~~~v~~~~~n----------~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 8 HGSSGLRCTRDG----------ALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp SSSSCEECCSSC----------CCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred ccCCEEEcCCCC----------CCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 999999997532 344 3777 88999999999996 8998766678999999999999999999888888
Q ss_pred hhccccccceEecccCCCCCCchhhhhhccccceeccccccC
Q 039419 98 IGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLS 139 (1035)
Q Consensus 98 i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~ 139 (1035)
|++|++|++|+|++|+|++..+..+..+. |++|+|.+|.+.
T Consensus 76 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred hcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 89999999999999999844433444444 888888888876
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.06 E-value=2e-10 Score=122.97 Aligned_cols=129 Identities=16% Similarity=0.101 Sum_probs=97.2
Q ss_pred eeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCc--eeeEEeEEEcCCcce
Q 039419 695 GKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKN--IVRFLGCCWNRNTRL 772 (1035)
Q Consensus 695 G~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~~~~~ 772 (1035)
+.|..+.||++...+|+.+++|+..... ...+.+|+.+++.+.+.+ +.++++++...+..|
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----------------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~ 91 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA-----------------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW 91 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT-----------------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc-----------------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCE
Confidence 4556699999987778889999975421 124778999999985434 567899888888889
Q ss_pred EEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccC----------------------------------
Q 039419 773 LMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDC---------------------------------- 818 (1035)
Q Consensus 773 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---------------------------------- 818 (1035)
+||||++|.++. ... .. ...++.++++.+..||+..
T Consensus 92 ~v~e~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 92 LLLGEVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp EEEECCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EEEEecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 999999998884 211 11 1256778888888888742
Q ss_pred ---------------------CCCeeccCCCcccEEEcCCCceEEeeccCccc
Q 039419 819 ---------------------VPPIVHRDIKANNILIGPEFEPYIADFGLAKL 850 (1035)
Q Consensus 819 ---------------------~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~ 850 (1035)
...++|+|++|.||+++.++.+.|+|||.+..
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776677999998753
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1.1e-09 Score=123.09 Aligned_cols=142 Identities=13% Similarity=0.193 Sum_probs=106.2
Q ss_pred CCeeeeeCCcEEEEEEECCCcEEEEEEec--CCCcccccccccccccccccHHHHHHHHHHHhcCC--CCceeeEEeEEE
Q 039419 691 DSVVGKGCSGIVYRAEMENGEVIAVKKLW--PTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR--HKNIVRFLGCCW 766 (1035)
Q Consensus 691 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l~~~~~ 766 (1035)
.+.++.|.++.||+++..+ ..+++|+.. ...... ....+.+|+.+++.+. +..+++++.++.
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~-------------~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~ 108 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLP-------------SAHAIEREYRVMDALAGTDVPVAKMYALCE 108 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC-----------------------CHHHHHHHHHHHTTSSSCCCCEEEEEC
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCC-------------cHHHHHHHHHHHHHhhcCCCCCCcEEEECC
Confidence 4578999999999998764 678888775 321111 1235788999999997 456888999887
Q ss_pred cC---CcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccC-------------------------
Q 039419 767 NR---NTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDC------------------------- 818 (1035)
Q Consensus 767 ~~---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------- 818 (1035)
+. +..|+||||++|..+.+... ..++...+..++.+++++|+.||+..
T Consensus 109 ~~~~~g~~~~vme~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (359)
T 3dxp_A 109 DESVIGRAFYIMEFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTK 184 (359)
T ss_dssp CTTTTSSCEEEEECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHH
T ss_pred CCCccCCeEEEEEecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHH
Confidence 76 45899999999988754221 12677888899999999999999731
Q ss_pred ------------------------------CCCeeccCCCcccEEEcCCCc--eEEeeccCccc
Q 039419 819 ------------------------------VPPIVHRDIKANNILIGPEFE--PYIADFGLAKL 850 (1035)
Q Consensus 819 ------------------------------~~~ivHrDikp~NIll~~~~~--~kl~DFG~a~~ 850 (1035)
.+.++|||++|.||+++.++. +.|+||+.+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 185 QYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.91 E-value=1.2e-08 Score=115.73 Aligned_cols=303 Identities=10% Similarity=0.043 Sum_probs=156.2
Q ss_pred CCCCCcccceEeecCcccCCCCCCCCCCCCCCceeeCCCCCCCCCCChhhhccccccceEecccCCCCCCchhhhhhccc
Q 039419 49 NLSSLSFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSNQLTGEIPKELGACIKL 128 (1035)
Q Consensus 49 ~~~~l~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 128 (1035)
++..-.+|+.+.+.. +++......|.++.+|+.++|..+ ++.....++.++ +|+.+.+..+ ++ .+....-...+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGTDL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTCCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-EeccceeccCCc
Confidence 355667788888864 566445567888888988888644 553445566665 5777766543 33 233222223467
Q ss_pred cceeccccccCCCCchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCcccccccccccceeecc
Q 039419 129 KNLLLFDNYLSGNLPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLGKLSKLQSLSVYT 208 (1035)
Q Consensus 129 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~ 208 (1035)
+.+.+..+... .....+.+. +|+.+.+..+- .......+..+..++.+.+..+.........+ ..
T Consensus 116 ~~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~~v--~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-----------~~ 180 (379)
T 4h09_A 116 DDFEFPGATTE-IGNYIFYNS-SVKRIVIPKSV--TTIKDGIGYKAENLEKIEVSSNNKNYVAENYV-----------LY 180 (379)
T ss_dssp SEEECCTTCCE-ECTTTTTTC-CCCEEEECTTC--CEECSCTTTTCTTCCEEEECTTCSSEEEETTE-----------EE
T ss_pred ccccCCCcccc-ccccccccc-eeeeeecccee--eccccchhcccccccccccccccceeecccce-----------ec
Confidence 77777654321 222223222 34444333221 11112233344444444433322211000000 00
Q ss_pred cccccCCccccccCcCCceEEecCCcCCCCCChhhhcccchhHhhcccccccccCCccccCCCCCcEEEccCccCCCCCC
Q 039419 209 TMLSGEIPPQIGNCSELVDLFLYENDLSGSLPRELGKLQKLEKMLLWQNNFDGAIPEEIGNCKSLKTIDLSLNFFSGSLP 288 (1035)
Q Consensus 209 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 288 (1035)
+... .....+.....+..+.+..+... .....+....+|+.+.+..+ +......+|.++..|+.+.+..+ ++.+..
T Consensus 181 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~ 256 (379)
T 4h09_A 181 NKNK-TILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGS 256 (379)
T ss_dssp ETTS-SEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECT
T ss_pred cccc-ceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCc
Confidence 0000 12223333444444444433222 33344455555555555433 33344555666677777777655 444555
Q ss_pred ccccCCCCCcEEEccCCccccCCCCcccCCCccceeccccchhhhhhhhccccCCCCCcCCCCCCCCcEEeccCcCCCCC
Q 039419 289 QSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDTNQISVFFAWQNKLEGSIPSTLANCRSLEAVDLSHNALTGS 368 (1035)
Q Consensus 289 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~l~~~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 368 (1035)
.+|.++.+|+.+.+..+ +..+...+|.++.+|+.+.+..+.++.+. ..+|.++.+|+.++|..+ ++.+
T Consensus 257 ~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~----------~~aF~~c~~L~~i~lp~~-l~~I 324 (379)
T 4h09_A 257 FLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLE----------PRVFMDCVKLSSVTLPTA-LKTI 324 (379)
T ss_dssp TTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEEC----------TTTTTTCTTCCEEECCTT-CCEE
T ss_pred cccceeehhcccccccc-ceeccccccccccccccccccccccceeh----------hhhhcCCCCCCEEEcCcc-ccEE
Confidence 66677777777777543 44455566777777777777666655432 246777777777777644 5545
Q ss_pred CCCCcccCcccceEecccc
Q 039419 369 LHPGLFQLQNLTKLLLISN 387 (1035)
Q Consensus 369 ~~~~~~~l~~L~~L~L~~N 387 (1035)
....|.++.+|+.+.+..+
T Consensus 325 ~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 325 QVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTTTTTCTTCCCCCCCTT
T ss_pred HHHHhhCCCCCCEEEECCc
Confidence 5566667777777766543
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=4.8e-10 Score=124.82 Aligned_cols=91 Identities=15% Similarity=0.182 Sum_probs=46.4
Q ss_pred CchhhccccccceeecCCCcccCCCCCCcCCCccceEEEEeccccccccCccccc--ccccccceeeccc--ccccC---
Q 039419 142 LPVELGKLVNLEVIRAGGNKDIAGKIPYEIGDCQSLLVVGLADTKVAGSLPASLG--KLSKLQSLSVYTT--MLSGE--- 214 (1035)
Q Consensus 142 ~p~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~p~~l~--~l~~L~~L~l~~n--~l~~~--- 214 (1035)
+...+..+++|+.|++.+|..+ .++. + .+++|+.|.+..+.+.......+. .+++|++|+|+.+ ...+.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l--~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~ 239 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL--SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDM 239 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC--BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCG
T ss_pred HHHHHhcCCCCcEEEEeCCCCc--eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhH
Confidence 3344555666666666655211 1222 2 256667777766666544444444 5677777776431 11111
Q ss_pred --Ccccc--ccCcCCceEEecCCcCC
Q 039419 215 --IPPQI--GNCSELVDLFLYENDLS 236 (1035)
Q Consensus 215 --~p~~l--~~l~~L~~L~L~~n~l~ 236 (1035)
+...+ ..+++|+.|+|.+|.++
T Consensus 240 ~~l~~~l~~~~~p~Lr~L~L~~~~i~ 265 (362)
T 2ra8_A 240 NVFRPLFSKDRFPNLKWLGIVDAEEQ 265 (362)
T ss_dssp GGTGGGSCTTTCTTCCEEEEESCTTH
T ss_pred HHHHHHHhcCCCCCcCEEeCCCCCCc
Confidence 11111 23566666666666655
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.86 E-value=3e-10 Score=126.50 Aligned_cols=62 Identities=19% Similarity=0.183 Sum_probs=34.3
Q ss_pred CChhhhccccccceEecccCCCCCCchhhhhhccccceeccccccCCCCchhhc--cccccceeecC
Q 039419 94 VPSSIGKLINLQDLILNSNQLTGEIPKELGACIKLKNLLLFDNYLSGNLPVELG--KLVNLEVIRAG 158 (1035)
Q Consensus 94 ~p~~i~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~--~l~~L~~L~l~ 158 (1035)
+...+..+++|+.|.|++|.-. .++. + .+++|++|+|..|.+.......++ .+++|++|+|+
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 4444556667777777665211 1232 3 256677777766665533333443 56677777664
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.85 E-value=6.5e-08 Score=109.54 Aligned_cols=60 Identities=12% Similarity=0.264 Sum_probs=27.3
Q ss_pred cCCCCccceeecCCCccCCCCcccccCCCCccEEEcCCCccCCCCchhccCccccchhhcc
Q 039419 411 FGNCTQLQMLNLSNNTLGGTLPSSLASLTRLQVLDISVNQFVGLIPESFGQLASLNRLILS 471 (1035)
Q Consensus 411 ~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 471 (1035)
|.++.+|+.+.+.++.++.+...+|.+..+|+.++|..+ ++.+...+|.++.+|+.+.+.
T Consensus 282 F~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 282 CSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred cccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 344444444444444444344444444445555554432 333334444444444444443
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.84 E-value=1.1e-09 Score=120.04 Aligned_cols=187 Identities=19% Similarity=0.158 Sum_probs=121.6
Q ss_pred CCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCc--eeeEEeEEEc
Q 039419 691 DSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKN--IVRFLGCCWN 767 (1035)
Q Consensus 691 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpn--iv~l~~~~~~ 767 (1035)
.+.++.|....||++. +.+++|+.... .....+.+|+++++.+. +.. +.+++.....
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----------------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~ 84 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----------------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP 84 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----------------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----------------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC
Confidence 3568999999999874 56888986432 12457889999998883 332 4455555433
Q ss_pred CC---cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhcc---------------------------
Q 039419 768 RN---TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHD--------------------------- 817 (1035)
Q Consensus 768 ~~---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~--------------------------- 817 (1035)
.+ ..|+||||++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 85 ~~~~~~~~~vm~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (304)
T 3sg8_A 85 SETYQMSFAGFTKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKL 160 (304)
T ss_dssp CSSCSCSCEEEECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHH
T ss_pred CCCCCcceEEEcccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHH
Confidence 33 35899999999888754322 166777788888888888888861
Q ss_pred ----------------------------CCCCeeccCCCcccEEEcC--CCceEEeeccCccccccCC-cccccccc--C
Q 039419 818 ----------------------------CVPPIVHRDIKANNILIGP--EFEPYIADFGLAKLVVEGD-FARSSNTV--A 864 (1035)
Q Consensus 818 ----------------------------~~~~ivHrDikp~NIll~~--~~~~kl~DFG~a~~~~~~~-~~~~~~~~--~ 864 (1035)
..+.++|+|++|.||+++. ++.+.|+||+.+..-.+.. ........ .
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~ 240 (304)
T 3sg8_A 161 LSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEY 240 (304)
T ss_dssp HTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSC
T ss_pred hcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhcccc
Confidence 1135899999999999998 4567899999987532210 00000000 0
Q ss_pred Ccc-------cc--cC-CcccccCCCCccccchhHHHHHHHHHhCCCCC
Q 039419 865 GSY-------GY--IA-PEYGYMMKITEKSDVYSYGVVVLEVLTGKQPI 903 (1035)
Q Consensus 865 gt~-------~y--~a-PE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~ 903 (1035)
+.. .| .. |+... +.....+.|++|.++|++.+|..+|
T Consensus 241 ~~~~~~~~l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 241 GMEFVSKILNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CHHHHHHHHHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 000 11 11 11111 1112368999999999999998765
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.62 E-value=1.8e-09 Score=113.86 Aligned_cols=20 Identities=10% Similarity=-0.187 Sum_probs=14.0
Q ss_pred CccceeEEeCCCC-cEEEEEe
Q 039419 18 PCKWSHITCSPQN-FVTEINI 37 (1035)
Q Consensus 18 ~c~w~gi~c~~~~-~v~~l~~ 37 (1035)
.|.|.|+.|+..+ +|+-+..
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~ 97 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIIN 97 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEE
T ss_pred HHhcCcEEECCCCCEEEEEEe
Confidence 5899999998764 4543333
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.60 E-value=1.6e-07 Score=103.52 Aligned_cols=136 Identities=20% Similarity=0.155 Sum_probs=100.8
Q ss_pred ccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCC----CceeeEE
Q 039419 687 CLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRH----KNIVRFL 762 (1035)
Q Consensus 687 ~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----pniv~l~ 762 (1035)
.+...+.++.|....||++ ++.+++|+..... ....+.+|+++++.+.+ ..+.+++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~----------------~~~~~~~E~~~L~~L~~~~~~~~vP~v~ 97 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS----------------VRISQKRELELYRFLENCKLSYQIPAVV 97 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH----------------HHHHHHHHHHHHHHHTTSCCSSBCCCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH----------------HHHHHHHHHHHHHHHHhcCCCCCcceEE
Confidence 4445678999999999998 6678888764311 13468899999998865 2345555
Q ss_pred eEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCC-----------------------
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCV----------------------- 819 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~----------------------- 819 (1035)
++ +..|+||||++|.++...... .++......++.++++.++.||+...
T Consensus 98 ~~----~~~~lvme~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (320)
T 3r70_A 98 YQ----SDRFNIMKYIKGERITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKK 169 (320)
T ss_dssp EE----CSSCEEEECCCCBCCCHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHH
T ss_pred ec----CCcEEEEeecCCccccccccc----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHH
Confidence 54 567999999999988743311 15666677788888888888885422
Q ss_pred -------------------------------------CCeeccCCCcccEEEcCCCceEEeeccCccc
Q 039419 820 -------------------------------------PPIVHRDIKANNILIGPEFEPYIADFGLAKL 850 (1035)
Q Consensus 820 -------------------------------------~~ivHrDikp~NIll~~~~~~kl~DFG~a~~ 850 (1035)
+.++|+|++|.||+++.++.+.|+||+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 170 LLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999876679999999864
No 416
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.45 E-value=1.3e-06 Score=94.22 Aligned_cols=77 Identities=19% Similarity=0.225 Sum_probs=60.6
Q ss_pred cCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCC---ceeeEEeEEE
Q 039419 690 EDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHK---NIVRFLGCCW 766 (1035)
Q Consensus 690 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~l~~~~~ 766 (1035)
..+.||.|.++.||+++..+|+.++||+...... .....|.+|++.++.+.+. .+++++++.
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~--------------~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~- 83 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--------------ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD- 83 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--------------CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc--------------chhHHHHHHHHHHHHHHhcCCCCcCeEEEec-
Confidence 3568999999999999988899999999643211 1135789999999999765 578888763
Q ss_pred cCCcceEEEEeCCCCChh
Q 039419 767 NRNTRLLMYDYMPNGSLG 784 (1035)
Q Consensus 767 ~~~~~~lv~e~~~~gsL~ 784 (1035)
..|+||||++|+++.
T Consensus 84 ---~~~lvme~l~g~~~~ 98 (288)
T 3d1u_A 84 ---DRTLAMEWVDERPPT 98 (288)
T ss_dssp ---TTEEEEECCCCCCCC
T ss_pred ---CcEEEEEecccCCCC
Confidence 469999999998753
No 417
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.33 E-value=1.9e-06 Score=92.39 Aligned_cols=134 Identities=18% Similarity=0.129 Sum_probs=96.2
Q ss_pred eeeeeCCc-EEEEEEEC-CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCceeeEEeEEEcCC
Q 039419 693 VVGKGCSG-IVYRAEME-NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKNIVRFLGCCWNRN 769 (1035)
Q Consensus 693 ~iG~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~ 769 (1035)
.+..|..| .||+.... ++..+++|+-... ....+.+|+.+|+.+. +--+.++++++.+.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----------------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~ 93 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----------------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD 93 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-----------------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-----------------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC
Confidence 45666666 69998765 4667899986431 2346788999999884 334778899999999
Q ss_pred cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccC-------------------------------
Q 039419 770 TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDC------------------------------- 818 (1035)
Q Consensus 770 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------- 818 (1035)
..|+|||+++|.++.+...... .....++.++++.+..||+..
T Consensus 94 ~~~lvme~l~G~~~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (272)
T 4gkh_A 94 DAWLLTTAIPGKTAFQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDF 167 (272)
T ss_dssp EEEEEEECCCSEEHHHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGC
T ss_pred eEEEEEEeeCCccccccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhc
Confidence 9999999999988876543321 122345556666666666421
Q ss_pred ------------------------CCCeeccCCCcccEEEcCCCceEEeeccCcc
Q 039419 819 ------------------------VPPIVHRDIKANNILIGPEFEPYIADFGLAK 849 (1035)
Q Consensus 819 ------------------------~~~ivHrDikp~NIll~~~~~~kl~DFG~a~ 849 (1035)
.+.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 168 DDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1238999999999999987777799999875
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.33 E-value=4.9e-08 Score=102.81 Aligned_cols=98 Identities=22% Similarity=0.245 Sum_probs=70.0
Q ss_pred eEeeeccCCCCccce--eecCCCccC---CCCcccccCCCCccEEEcCCCccCCCC--chhccCccccchhhccCCcccc
Q 039419 405 RLRLMSFGNCTQLQM--LNLSNNTLG---GTLPSSLASLTRLQVLDISVNQFVGLI--PESFGQLASLNRLILSKNSFSG 477 (1035)
Q Consensus 405 ~L~~~~~~~l~~L~~--L~L~~N~l~---~~~~~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~ 477 (1035)
.|++..|...+.|.. ++++.|+.. ..++....++++|+.|+|++|+|+++. +..+..+++|+.|+|++|+|++
T Consensus 131 ~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~ 210 (267)
T 3rw6_A 131 ALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS 210 (267)
T ss_dssp EEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCS
T ss_pred ccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCC
Confidence 455555666677776 778888544 122222356788999999999998743 4667788999999999999986
Q ss_pred cCccccCCCC--CCcEEEcCCCcCcCccc
Q 039419 478 AIPSSLGRCE--SLQSLDLSSNKLSGKIP 504 (1035)
Q Consensus 478 ~~~~~~~~l~--~L~~L~Ls~N~l~~~~p 504 (1035)
. ..+..+. +|++|+|++|.+.+.+|
T Consensus 211 ~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 211 E--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp G--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred c--hhhhhcccCCcceEEccCCcCccccC
Confidence 5 2344444 89999999999987665
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.32 E-value=2.1e-06 Score=93.62 Aligned_cols=135 Identities=19% Similarity=0.179 Sum_probs=93.4
Q ss_pred CeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCC---ceeeEEeEEE-c
Q 039419 692 SVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHK---NIVRFLGCCW-N 767 (1035)
Q Consensus 692 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~l~~~~~-~ 767 (1035)
+.++.|....||+. ++.+++|+.... .....+.+|+++++.+.+. .+.+++.++. .
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~----------------~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~ 84 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQ----------------QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS 84 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH----------------HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCc----------------hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC
Confidence 46788999999998 567888885221 1245788999999999642 3667777774 4
Q ss_pred CCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhcc------------------------------
Q 039419 768 RNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHD------------------------------ 817 (1035)
Q Consensus 768 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------ 817 (1035)
.+..|+||||++|..+.+.... .++......++.++++.|+.||+.
T Consensus 85 ~g~~~~v~e~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~ 160 (306)
T 3tdw_A 85 DGNPFVGYRKVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQV 160 (306)
T ss_dssp TSCEEEEEECCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEeccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 5567899999999888763211 134444445555555555555532
Q ss_pred ---------------------------CCCCeeccCCCcccEEEcC---CCc-eEEeeccCccc
Q 039419 818 ---------------------------CVPPIVHRDIKANNILIGP---EFE-PYIADFGLAKL 850 (1035)
Q Consensus 818 ---------------------------~~~~ivHrDikp~NIll~~---~~~-~kl~DFG~a~~ 850 (1035)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 161 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred ccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 455 47999998764
No 420
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.27 E-value=2.5e-06 Score=95.35 Aligned_cols=75 Identities=9% Similarity=0.022 Sum_probs=57.2
Q ss_pred cCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCC--ceeeEEeEEEc
Q 039419 690 EDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHK--NIVRFLGCCWN 767 (1035)
Q Consensus 690 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp--niv~l~~~~~~ 767 (1035)
..+.++.|....+|+.+. +++.+++|+.... ..+.+|+.+++.+... .+.++++++.+
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------------------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~ 104 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------------------DGFYKDRYVYRHFASAALPIPEVLDIGEF 104 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------------------HHHHHHHHHHHHHCCSSSCCCCEEEEEES
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------------------hhHHHHHHHHHHHHhcCCCCceEEEeccC
Confidence 345789999999999976 4788999987431 2478899999988643 35677777766
Q ss_pred C-CcceEEEEeCCCCChh
Q 039419 768 R-NTRLLMYDYMPNGSLG 784 (1035)
Q Consensus 768 ~-~~~~lv~e~~~~gsL~ 784 (1035)
. +..|+||||++|.++.
T Consensus 105 ~~g~~~lv~e~l~G~~l~ 122 (362)
T 3ovc_A 105 SESLTYCISRRAQGVTLQ 122 (362)
T ss_dssp SSSCEEEEEECCCSEETT
T ss_pred CCCCeEEEEEecCCCCcc
Confidence 5 5689999999987664
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.26 E-value=1.6e-07 Score=94.24 Aligned_cols=89 Identities=22% Similarity=0.230 Sum_probs=53.4
Q ss_pred CCCCccceeecCCC-ccCCC----CcccccCCCCccEEEcCCCccCCC----CchhccCccccchhhccCCccccc----
Q 039419 412 GNCTQLQMLNLSNN-TLGGT----LPSSLASLTRLQVLDISVNQFVGL----IPESFGQLASLNRLILSKNSFSGA---- 478 (1035)
Q Consensus 412 ~~l~~L~~L~L~~N-~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~---- 478 (1035)
...+.|++|+|++| .|... +...+...+.|++|+|++|+|... +...+...+.|++|+|++|.|...
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 34455666666666 55521 233445556677777777776532 123344445677777777777532
Q ss_pred CccccCCCCCCcEEEc--CCCcCc
Q 039419 479 IPSSLGRCESLQSLDL--SSNKLS 500 (1035)
Q Consensus 479 ~~~~~~~l~~L~~L~L--s~N~l~ 500 (1035)
+...+...+.|++|+| ++|.|.
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHhCCCceEEEecCCCCCCC
Confidence 3455666677888888 677776
No 422
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.26 E-value=3.8e-08 Score=98.74 Aligned_cols=117 Identities=16% Similarity=0.133 Sum_probs=79.6
Q ss_pred cCCcCCCCCcccceEeecCc-ccCCC----CCCCCCCCCCCceeeCCCCCCCCCC----ChhhhccccccceEecccCCC
Q 039419 45 PFPSNLSSLSFLQKLIISGS-NLTGP----ISPDLGDCTQLTTIDVSSNSLVGGV----PSSIGKLINLQDLILNSNQLT 115 (1035)
Q Consensus 45 ~~~~~~~~l~~L~~L~L~~~-~l~~~----~~~~~~~l~~L~~L~ls~n~l~~~~----p~~i~~l~~L~~L~L~~n~l~ 115 (1035)
.+...+...+.|++|+|++| .++.. +...+...+.|++|+|++|.|.+.. .+.+...+.|++|+|++|.+.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455777888999999998 88753 3334556788999999999887433 334455578899999998887
Q ss_pred CC----Cchhhhhhccccceec--cccccCCCCch----hhccccccceeecCCCc
Q 039419 116 GE----IPKELGACIKLKNLLL--FDNYLSGNLPV----ELGKLVNLEVIRAGGNK 161 (1035)
Q Consensus 116 ~~----~p~~l~~l~~L~~L~l--~~n~l~~~~p~----~l~~l~~L~~L~l~~n~ 161 (1035)
+. +...+...++|++|+| ++|.+...... .+...++|++|++++|.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~ 162 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 162 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCC
Confidence 54 3445566678888888 77887754332 33334566666666554
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.21 E-value=2.5e-07 Score=90.20 Aligned_cols=84 Identities=15% Similarity=0.090 Sum_probs=53.0
Q ss_pred cccceEeecCcccCCCCCCCCCCCCCCceeeCCCCC-CCCCCChhhhcc----ccccceEeccc-CCCCCCchhhhhhcc
Q 039419 54 SFLQKLIISGSNLTGPISPDLGDCTQLTTIDVSSNS-LVGGVPSSIGKL----INLQDLILNSN-QLTGEIPKELGACIK 127 (1035)
Q Consensus 54 ~~L~~L~L~~~~l~~~~~~~~~~l~~L~~L~ls~n~-l~~~~p~~i~~l----~~L~~L~L~~n-~l~~~~p~~l~~l~~ 127 (1035)
.+|++|||++|.|++.....+..+++|++|+|++|. |++..-..|+.+ ++|++|+|++| ++|+..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777776666666667777777777763 665444455543 35667777666 366555555666666
Q ss_pred ccceeccccc
Q 039419 128 LKNLLLFDNY 137 (1035)
Q Consensus 128 L~~L~l~~n~ 137 (1035)
|++|+|++|.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666666654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.16 E-value=5.4e-07 Score=87.83 Aligned_cols=86 Identities=9% Similarity=0.094 Sum_probs=70.4
Q ss_pred CCCceeeCCCCCCCCCCChhhhccccccceEeccc-CCCCCCchhhhhh----ccccceeccccc-cCCCCchhhccccc
Q 039419 78 TQLTTIDVSSNSLVGGVPSSIGKLINLQDLILNSN-QLTGEIPKELGAC----IKLKNLLLFDNY-LSGNLPVELGKLVN 151 (1035)
Q Consensus 78 ~~L~~L~ls~n~l~~~~p~~i~~l~~L~~L~L~~n-~l~~~~p~~l~~l----~~L~~L~l~~n~-l~~~~p~~l~~l~~ 151 (1035)
.+|++|||++|.|++..-..+.++++|++|+|++| ++++..-..++.+ ++|++|+|++|. +++..-..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 46999999999998777788889999999999999 5887666777764 479999999985 77666677888888
Q ss_pred cceeecCCCccc
Q 039419 152 LEVIRAGGNKDI 163 (1035)
Q Consensus 152 L~~L~l~~n~~~ 163 (1035)
|++|++++|..+
T Consensus 141 L~~L~L~~c~~I 152 (176)
T 3e4g_A 141 LKYLFLSDLPGV 152 (176)
T ss_dssp CCEEEEESCTTC
T ss_pred CCEEECCCCCCC
Confidence 888888888633
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14 E-value=5.3e-06 Score=92.85 Aligned_cols=83 Identities=10% Similarity=0.017 Sum_probs=56.0
Q ss_pred Cee-eeeCCcEEEEEEEC-------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-C--Cceee
Q 039419 692 SVV-GKGCSGIVYRAEME-------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-H--KNIVR 760 (1035)
Q Consensus 692 ~~i-G~G~~g~V~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--pniv~ 760 (1035)
+.| +.|....+|+.+.. +++.+++|+.......... ....+.+|+.+++.+. + -.+.+
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~-----------~~~~~~~E~~~l~~L~~~~~vpvP~ 94 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVF-----------PTYRLDHQFEVIRLVGELTDVPVPR 94 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSS-----------SCCCHHHHHHHHHHHHHHCCSCCCC
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccC-----------chhHHHHHHHHHHHHhhcCCCCCCc
Confidence 466 78888999998654 2677888876432100000 0124678999998884 3 35778
Q ss_pred EEeEEEcC---CcceEEEEeCCCCChhh
Q 039419 761 FLGCCWNR---NTRLLMYDYMPNGSLGS 785 (1035)
Q Consensus 761 l~~~~~~~---~~~~lv~e~~~~gsL~~ 785 (1035)
++.++.+. +..|+||||++|..+.+
T Consensus 95 v~~~~~~~~~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 95 VRWIETTGDVLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp EEEEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred EEEEccCCCccCCceEEEEecCCCChhh
Confidence 88887665 35689999999877654
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.84 E-value=4.4e-05 Score=84.73 Aligned_cols=138 Identities=14% Similarity=0.237 Sum_probs=78.6
Q ss_pred eeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCC--CceeeEEe------E
Q 039419 693 VVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRH--KNIVRFLG------C 764 (1035)
Q Consensus 693 ~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~------~ 764 (1035)
.|+.|..+.||++...+| .+++|+.... .+.+..|+.+++.+.. -.+++++. +
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~------------------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~ 99 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP------------------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLY 99 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC------------------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC------------------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEE
Confidence 456678899999987655 5899988641 1233445555555531 12333332 1
Q ss_pred EEcCCcceEEEEeCCCCChh--------------hhhhhcCC-C-----------CCCHHHH------------------
Q 039419 765 CWNRNTRLLMYDYMPNGSLG--------------SLLHERRD-S-----------CLEWELR------------------ 800 (1035)
Q Consensus 765 ~~~~~~~~lv~e~~~~gsL~--------------~~l~~~~~-~-----------~l~~~~~------------------ 800 (1035)
....+..++||||++|..+. ..+|.... . ...|...
T Consensus 100 ~~~~~~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (346)
T 2q83_A 100 SKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAE 179 (346)
T ss_dssp EEETTEEEEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCEEEEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 23456779999999987542 11221110 0 0122211
Q ss_pred -------------HHHHHHHHHHHHHhhc----------cCCCCeeccCCCcccEEEcCCCceEEeeccCcc
Q 039419 801 -------------YRIILGAAQGLAYLHH----------DCVPPIVHRDIKANNILIGPEFEPYIADFGLAK 849 (1035)
Q Consensus 801 -------------~~i~~~ia~~L~~LH~----------~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~ 849 (1035)
..+...+.+++++|++ ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 180 KEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666653 023489999999999999888889999999764
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.84 E-value=8.8e-05 Score=80.39 Aligned_cols=137 Identities=17% Similarity=0.168 Sum_probs=92.4
Q ss_pred CCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC---CCceeeEEeEEEc
Q 039419 691 DSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR---HKNIVRFLGCCWN 767 (1035)
Q Consensus 691 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~ 767 (1035)
.+.|+.|....+|+.+.. ++.+++|+.... ....+.+|+..|+.+. ...++++++++..
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-----------------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~ 102 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS-----------------YRSMFRAEADQLALLAKTNSINVPLVYGIGNS 102 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG-----------------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc-----------------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec
Confidence 357899999999999864 678889987431 1356889999999884 3678899998888
Q ss_pred CCcceEEEEeCCCCChhh-----------hhhhcCC-C-------------------CCCHHHHH---HHH---------
Q 039419 768 RNTRLLMYDYMPNGSLGS-----------LLHERRD-S-------------------CLEWELRY---RII--------- 804 (1035)
Q Consensus 768 ~~~~~lv~e~~~~gsL~~-----------~l~~~~~-~-------------------~l~~~~~~---~i~--------- 804 (1035)
.+..|+||||++|..+.. .++.... . .-+|.... ++.
T Consensus 103 ~g~~~lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~ 182 (312)
T 3jr1_A 103 QGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEK 182 (312)
T ss_dssp SSEEEEEEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHH
T ss_pred CCceEEEEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHc
Confidence 888999999999986521 2232211 0 11354322 111
Q ss_pred -------HHHHH-HHHHhhc-cCCCCeeccCCCcccEEEcCCCceEEeecc
Q 039419 805 -------LGAAQ-GLAYLHH-DCVPPIVHRDIKANNILIGPEFEPYIADFG 846 (1035)
Q Consensus 805 -------~~ia~-~L~~LH~-~~~~~ivHrDikp~NIll~~~~~~kl~DFG 846 (1035)
..++. ....|.. ...+.++|+|+.+.|++++.++ +.|+||+
T Consensus 183 g~~~~~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 183 GLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp TCCCSCHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred CCChHHHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 1223421 2245899999999999999887 8899973
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82 E-value=6.6e-05 Score=85.16 Aligned_cols=81 Identities=12% Similarity=0.090 Sum_probs=51.2
Q ss_pred CCeeeeeCCcEEEEEEEC-CCcEEEEEEecCCCc-ccccccccccccccccHHHHHHHHHHHhcCCC--C-ceeeEEeEE
Q 039419 691 DSVVGKGCSGIVYRAEME-NGEVIAVKKLWPTTM-AAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRH--K-NIVRFLGCC 765 (1035)
Q Consensus 691 ~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--p-niv~l~~~~ 765 (1035)
.+.||.|.++.||++... +++.++||...+... .... .....+++..|+++++.+.. | .+.+++.+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~--------~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~- 105 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGES--------WPLTIDRARIESSALIRQGEHVPHLVPRVFYS- 105 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC---------------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCC--------CcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-
Confidence 357899999999999654 468899998764321 0000 00123567789999987732 3 44566654
Q ss_pred EcCCcceEEEEeCCCC
Q 039419 766 WNRNTRLLMYDYMPNG 781 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~g 781 (1035)
+.+..++||||++|.
T Consensus 106 -d~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 106 -DTEMAVTVMEDLSHL 120 (397)
T ss_dssp -ETTTTEEEECCCTTS
T ss_pred -cCCccEEEEEeCCCc
Confidence 455678999999774
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.60 E-value=0.00036 Score=75.13 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=57.3
Q ss_pred ccccCCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-C--CceeeEEe
Q 039419 687 CLVEDSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-H--KNIVRFLG 763 (1035)
Q Consensus 687 ~~~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--pniv~l~~ 763 (1035)
+....+.+|.|..+.||+++..+|+.|++|+....... ....|.+|+..|+.+. . --++++++
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~--------------~~~~~~~Ea~~L~~L~~~~~vpvP~v~~ 81 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA--------------LDGLFRAEALGLDWLGRSFGSPVPQVAG 81 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC--------------CTTHHHHHHHHHHHHTCSTTCCSCCEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc--------------hhhHHHHHHHHHHHHHhhCCCCcceEEe
Confidence 34455788999999999999999999999987543211 1246889999999884 2 23455555
Q ss_pred EEEcCCcceEEEEeCCCCCh
Q 039419 764 CCWNRNTRLLMYDYMPNGSL 783 (1035)
Q Consensus 764 ~~~~~~~~~lv~e~~~~gsL 783 (1035)
+ +..++||||++++..
T Consensus 82 ~----~~~~lv~e~l~~~~~ 97 (288)
T 3f7w_A 82 W----DDRTLAMEWVDERPP 97 (288)
T ss_dssp E----ETTEEEEECCCCCCC
T ss_pred c----cCceEEEEeecccCC
Confidence 4 235899999987754
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.46 E-value=0.00053 Score=78.23 Aligned_cols=77 Identities=8% Similarity=0.055 Sum_probs=47.7
Q ss_pred CCeeccCCCcccEEEcCCCceEEeeccCccccccCCccccccccC--CcccccCCcccccC---CCCccccchhHHHHHH
Q 039419 820 PPIVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSNTVA--GSYGYIAPEYGYMM---KITEKSDVYSYGVVVL 894 (1035)
Q Consensus 820 ~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~---~~~~~~Dv~SlGvvl~ 894 (1035)
+.++|+|++|.|||++.++ ++++||+.+..-.+.- .. .... -...|++|+..... ......++......+|
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~--Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF--DI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH--HH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH--HH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 3899999999999998876 9999999987532210 00 0001 12346666654311 1112345567788888
Q ss_pred HHHhCC
Q 039419 895 EVLTGK 900 (1035)
Q Consensus 895 elltg~ 900 (1035)
+.+++.
T Consensus 308 ~~y~~~ 313 (420)
T 2pyw_A 308 NLFNKR 313 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877653
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.21 E-value=0.0014 Score=72.01 Aligned_cols=31 Identities=45% Similarity=0.504 Sum_probs=27.0
Q ss_pred CCeeccCCCcccEEEcCC----CceEEeeccCccc
Q 039419 820 PPIVHRDIKANNILIGPE----FEPYIADFGLAKL 850 (1035)
Q Consensus 820 ~~ivHrDikp~NIll~~~----~~~kl~DFG~a~~ 850 (1035)
+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 479999999999999875 6789999998764
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.06 E-value=0.0011 Score=71.84 Aligned_cols=72 Identities=13% Similarity=0.105 Sum_probs=45.3
Q ss_pred CCeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCce-eeEEeEEEcCC
Q 039419 691 DSVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNI-VRFLGCCWNRN 769 (1035)
Q Consensus 691 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~ 769 (1035)
.+.|+.|....+|++ +.+++|+........ ....+|+.+++.+...++ .+++++ +.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~---------------~~r~~E~~~l~~l~~~g~~P~~~~~--~~~ 80 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY---------------INRANEAVAAREAAKAGVSPEVLHV--DPA 80 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C---------------CCHHHHHHHHHHHHHTTSSCCEEEE--CTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce---------------eCHHHHHHHHHHHHHcCCCCceEEE--ECC
Confidence 567899999999999 568888875421100 012467877777642222 455553 444
Q ss_pred cceEEEEeC-CCCChh
Q 039419 770 TRLLMYDYM-PNGSLG 784 (1035)
Q Consensus 770 ~~~lv~e~~-~~gsL~ 784 (1035)
..++|+||+ +|.++.
T Consensus 81 ~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 81 TGVMVTRYIAGAQTMS 96 (301)
T ss_dssp TCCEEEECCTTCEECC
T ss_pred CCEEEEeecCCCccCC
Confidence 568999999 665553
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.03 E-value=0.0032 Score=69.04 Aligned_cols=140 Identities=14% Similarity=0.142 Sum_probs=81.0
Q ss_pred eeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCC--ceeeEEeE-----E
Q 039419 693 VVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHK--NIVRFLGC-----C 765 (1035)
Q Consensus 693 ~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp--niv~l~~~-----~ 765 (1035)
.++ |....||++...+|+.+++|...+... ..+.+..|..+++.+... .+++++.. .
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---------------~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~ 96 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW---------------TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLL 96 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS---------------CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCE
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC---------------CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEE
Confidence 466 888999999877787899999864321 134567788888877422 23444443 1
Q ss_pred EcCCcceEEEEeCCCCChhh-----h---------hhhcC-------CCCCCHHHH----------------------HH
Q 039419 766 WNRNTRLLMYDYMPNGSLGS-----L---------LHERR-------DSCLEWELR----------------------YR 802 (1035)
Q Consensus 766 ~~~~~~~lv~e~~~~gsL~~-----~---------l~~~~-------~~~l~~~~~----------------------~~ 802 (1035)
...+..+++|||++|..+.. + ++... ....++... ..
T Consensus 97 ~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 176 (328)
T 1zyl_A 97 NHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLK 176 (328)
T ss_dssp EETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHH
T ss_pred EECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHH
Confidence 22445678999998855421 0 11110 011222111 01
Q ss_pred HHHHHHHHHHHhhc-cCCCCeeccCCCcccEEEcCCCceEEeeccCccc
Q 039419 803 IILGAAQGLAYLHH-DCVPPIVHRDIKANNILIGPEFEPYIADFGLAKL 850 (1035)
Q Consensus 803 i~~~ia~~L~~LH~-~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~ 850 (1035)
.+..++..++..-. .....++|+|+++.||+++ + .+.++||+.+..
T Consensus 177 ~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 177 ATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11122222222111 1223789999999999999 4 889999988753
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.01 E-value=0.00016 Score=71.84 Aligned_cols=84 Identities=14% Similarity=0.149 Sum_probs=45.1
Q ss_pred CCccceeecCCC-ccCC----CCcccccCCCCccEEEcCCCccCCC----CchhccCccccchhhccCCcccc----cCc
Q 039419 414 CTQLQMLNLSNN-TLGG----TLPSSLASLTRLQVLDISVNQFVGL----IPESFGQLASLNRLILSKNSFSG----AIP 480 (1035)
Q Consensus 414 l~~L~~L~L~~N-~l~~----~~~~~l~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~----~~~ 480 (1035)
-+.|++|+|++| +|.. .+...+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|.. .+.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 345666666654 5542 1233444555666666666666532 22233344556666666666653 233
Q ss_pred cccCCCCCCcEEEcCCC
Q 039419 481 SSLGRCESLQSLDLSSN 497 (1035)
Q Consensus 481 ~~~~~l~~L~~L~Ls~N 497 (1035)
..+...+.|++|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 34555566777777654
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.98 E-value=8.1e-05 Score=73.90 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=68.8
Q ss_pred ccCCCCCcEEEccCc-cCCCC----CCccccCCCCCcEEEccCCccccCC----CCcccCCCccceeccccchhhhhhhh
Q 039419 267 IGNCKSLKTIDLSLN-FFSGS----LPQSFGNLSSLEELMLSNNNISGSI----PPVLSNATSLLQLQLDTNQISVFFAW 337 (1035)
Q Consensus 267 ~~~l~~L~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~i~~l~~~ 337 (1035)
+.+-+.|+.|+|++| +|... +...+..-+.|+.|+|++|+|.... ...+...+.|++|+|+.|+|+.-.+.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344567777777774 66532 2334555577778888888776432 33344566777777777777643321
Q ss_pred ccccCCCCCcCCCCCCCCcEEeccCcCC---CCC----CCCCcccCcccceEecccccc
Q 039419 338 QNKLEGSIPSTLANCRSLEAVDLSHNAL---TGS----LHPGLFQLQNLTKLLLISNGI 389 (1035)
Q Consensus 338 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l---~~~----~~~~~~~l~~L~~L~L~~N~i 389 (1035)
.+..++...+.|++|+|++|.. ... +...+...+.|++|+++.|.+
T Consensus 117 ------ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 117 ------RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp ------HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred ------HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 2234566666788888876533 211 223344556677777766654
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.85 E-value=0.0032 Score=68.81 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=78.8
Q ss_pred CeeeeeCCcEEEEEEECCCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCc--eeeEEeE-----
Q 039419 692 SVVGKGCSGIVYRAEMENGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKN--IVRFLGC----- 764 (1035)
Q Consensus 692 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~----- 764 (1035)
+.|+.|....+|++...+| .+++|+...... .+.+..|+.+++.+...+ +.+++..
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~----------------~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~ 90 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVE----------------KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGEL 90 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-------------------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCS
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCCC----------------HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCE
Confidence 3566788899999987755 688898854210 234667888877764212 2333321
Q ss_pred -EEcCCcceEEEEeCCCCChhh--------------hhhhcCC----CC---C---CHHHHHH------------HHHHH
Q 039419 765 -CWNRNTRLLMYDYMPNGSLGS--------------LLHERRD----SC---L---EWELRYR------------IILGA 807 (1035)
Q Consensus 765 -~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~----~~---l---~~~~~~~------------i~~~i 807 (1035)
....+..+++|+|++|..+.. .++.... .. . .|..... +...+
T Consensus 91 ~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l 170 (322)
T 2ppq_A 91 LGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEI 170 (322)
T ss_dssp CEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHH
T ss_pred EEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 122355689999999865421 1221110 00 0 1221100 00113
Q ss_pred HHHHHHhhcc----CCCCeeccCCCcccEEEcCCCceEEeeccCcc
Q 039419 808 AQGLAYLHHD----CVPPIVHRDIKANNILIGPEFEPYIADFGLAK 849 (1035)
Q Consensus 808 a~~L~~LH~~----~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~ 849 (1035)
.+.++++++. ...+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 171 ~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 171 RPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3444455421 22379999999999999987666899999775
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.85 E-value=0.0023 Score=71.20 Aligned_cols=140 Identities=16% Similarity=0.186 Sum_probs=81.5
Q ss_pred CeeeeeCCcEEEEEEEC--------CCcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCceeeEE
Q 039419 692 SVVGKGCSGIVYRAEME--------NGEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKNIVRFL 762 (1035)
Q Consensus 692 ~~iG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~ 762 (1035)
+.+..|-...+|++... +++.|++|+..... .....+.+|..+++.+. +.-..+++
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---------------~~~~~~~rE~~vl~~L~~~gv~P~ll 120 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---------------QGVDSLVLESVMFAILAERSLGPQLY 120 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------------------CCHHHHHHHHHHHHHHHHTTSSCCEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---------------chHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 45677888899999765 24789999863311 01345668999998884 33336667
Q ss_pred eEEEcCCcceEEEEeCCCCChhhh-----------------hhhcC---CCCCC--HHHHHHHHHHHHH-----------
Q 039419 763 GCCWNRNTRLLMYDYMPNGSLGSL-----------------LHERR---DSCLE--WELRYRIILGAAQ----------- 809 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~---~~~l~--~~~~~~i~~~ia~----------- 809 (1035)
+.+.+ .+||||++|.++..- +|... ..... +.++.++..++..
T Consensus 121 ~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~ 196 (379)
T 3feg_A 121 GVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNL 196 (379)
T ss_dssp EEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCH
T ss_pred EEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhh
Confidence 66543 289999998665421 11111 11122 3444444433321
Q ss_pred --------HHHH----hhcc-CCCCeeccCCCcccEEEcCC----CceEEeeccCccc
Q 039419 810 --------GLAY----LHHD-CVPPIVHRDIKANNILIGPE----FEPYIADFGLAKL 850 (1035)
Q Consensus 810 --------~L~~----LH~~-~~~~ivHrDikp~NIll~~~----~~~kl~DFG~a~~ 850 (1035)
.+.. |... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 197 ~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 197 LEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1222 2221 12379999999999999876 7899999988753
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.81 E-value=0.0025 Score=72.59 Aligned_cols=72 Identities=13% Similarity=0.253 Sum_probs=49.0
Q ss_pred CeeeeeCCcEEEEEEECC--------CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCc-eeeEE
Q 039419 692 SVVGKGCSGIVYRAEMEN--------GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKN-IVRFL 762 (1035)
Q Consensus 692 ~~iG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~l~ 762 (1035)
+.|+.|....||++...+ ++.+++|+..... ..+.+.+|..+++.+...+ .++++
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~----------------~~~~li~E~~~l~~L~~~g~~P~l~ 142 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----------------TESHLVAESVIFTLLSERHLGPKLY 142 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----------------CHHHHHHHHHHHHHHHHTTSSSCEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC----------------cHHHHHHHHHHHHHHHhCCCCCcEE
Confidence 467888899999998753 4789999873311 0134557999988884323 35677
Q ss_pred eEEEcCCcceEEEEeCCCCCh
Q 039419 763 GCCWNRNTRLLMYDYMPNGSL 783 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL 783 (1035)
+.+.+ .+||||++|.++
T Consensus 143 ~~~~~----g~v~e~l~G~~l 159 (429)
T 1nw1_A 143 GIFSG----GRLEEYIPSRPL 159 (429)
T ss_dssp EEETT----EEEECCCCEEEC
T ss_pred EEeCC----CEEEEEeCCccc
Confidence 65532 389999987554
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.69 E-value=0.0075 Score=68.90 Aligned_cols=73 Identities=18% Similarity=0.183 Sum_probs=47.3
Q ss_pred CeeeeeCCcEEEEEEECC-CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCce-eeEEeEEEcCC
Q 039419 692 SVVGKGCSGIVYRAEMEN-GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNI-VRFLGCCWNRN 769 (1035)
Q Consensus 692 ~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~ 769 (1035)
+.|+.|-...+|++...+ ++.+++|+..... .. .. .-.+|..+++.+...++ .++++.+. +
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~------------~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~ 176 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DE------------II-NREREKKISCILYNKNIAKKIYVFFT--N 176 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C--CS------------CS-CHHHHHHHHHHHTTSSSBCCEEEEET--T
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hh------------hc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C
Confidence 467889899999998875 5788899874321 00 00 12478999988864333 56777662 2
Q ss_pred cceEEEEeCCCCCh
Q 039419 770 TRLLMYDYMPNGSL 783 (1035)
Q Consensus 770 ~~~lv~e~~~~gsL 783 (1035)
.+||||++|.++
T Consensus 177 --G~v~e~I~G~~l 188 (458)
T 2qg7_A 177 --GRIEEFMDGYAL 188 (458)
T ss_dssp --EEEEECCCSEEC
T ss_pred --eEEEEeeCCccC
Confidence 359999988555
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.58 E-value=0.0037 Score=69.79 Aligned_cols=73 Identities=7% Similarity=0.084 Sum_probs=43.7
Q ss_pred CeeeeeCCcEEEEEEECC---------CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCc-eeeE
Q 039419 692 SVVGKGCSGIVYRAEMEN---------GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKN-IVRF 761 (1035)
Q Consensus 692 ~~iG~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~l 761 (1035)
+.++.|....+|++...+ ++.+++|+...... . ......|..+++.+...+ +.++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~-------------~~~~~~E~~~l~~L~~~g~~P~~ 103 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--E-------------LYNTISEFEVYKTMSKYKIAPQL 103 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--G-------------TSCHHHHHHHHHHHHHTTSSCCE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--c-------------eecHHHHHHHHHHHHhcCCCCce
Confidence 467788889999998764 26888888754211 0 001357888888774223 4466
Q ss_pred EeEEEcCCcceEEEEeCCCCCh
Q 039419 762 LGCCWNRNTRLLMYDYMPNGSL 783 (1035)
Q Consensus 762 ~~~~~~~~~~~lv~e~~~~gsL 783 (1035)
++.. . -++||||++|..+
T Consensus 104 ~~~~--~--~~~v~e~i~G~~l 121 (369)
T 3c5i_A 104 LNTF--N--GGRIEEWLYGDPL 121 (369)
T ss_dssp EEEE--T--TEEEEECCCSEEC
T ss_pred EEec--C--CcEEEEEecCCcC
Confidence 6544 2 3789999988644
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.36 E-value=0.01 Score=65.19 Aligned_cols=31 Identities=39% Similarity=0.563 Sum_probs=27.6
Q ss_pred CCeeccCCCcccEEEcCCCceEEeeccCccc
Q 039419 820 PPIVHRDIKANNILIGPEFEPYIADFGLAKL 850 (1035)
Q Consensus 820 ~~ivHrDikp~NIll~~~~~~kl~DFG~a~~ 850 (1035)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987764
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.19 E-value=0.0062 Score=56.34 Aligned_cols=24 Identities=25% Similarity=0.203 Sum_probs=12.0
Q ss_pred CCCccccCCccccEEeccCCcccC
Q 039419 527 AIPPQISALNKLSILDLSHNKLGG 550 (1035)
Q Consensus 527 ~~~~~~~~l~~L~~L~L~~N~l~~ 550 (1035)
+.++.|..+++|++|+|++|.+.+
T Consensus 46 l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 46 LPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp CCTTTGGGCTTCCEEECCSSCCBC
T ss_pred cChhhhhhccccCEEEecCCCeec
Confidence 333444445555555555555544
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.11 E-value=0.0053 Score=56.79 Aligned_cols=36 Identities=22% Similarity=0.358 Sum_probs=19.4
Q ss_pred cchhhccCCcccccCccccCCCCCCcEEEcCCCcCc
Q 039419 465 LNRLILSKNSFSGAIPSSLGRCESLQSLDLSSNKLS 500 (1035)
Q Consensus 465 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 500 (1035)
|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 444555555555444444555555666666666554
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.20 E-value=0.054 Score=60.31 Aligned_cols=152 Identities=13% Similarity=0.201 Sum_probs=83.2
Q ss_pred CeeeeeCCcEEEEEEECC--------CcEEEEEEecCCCccccccccc---ccccccc---cHHHHHHHHHHHhcCC-CC
Q 039419 692 SVVGKGCSGIVYRAEMEN--------GEVIAVKKLWPTTMAAEYDCQN---DKIGIGG---VRDSFSAEIKTLGSIR-HK 756 (1035)
Q Consensus 692 ~~iG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~E~~~l~~l~-hp 756 (1035)
+.|..|-...+|++..++ .+.|.+++.-..... ..+.+ ..+.... ..+....|..+++.+. +.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~--~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~G 135 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQM--RSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERS 135 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-------------------------CHHHHHHHHHHHHHHHTT
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCccc--ccccccccchhhhhhhhccchhhHHHHHHHHHHHhcC
Confidence 466678888999987754 367888887543210 00000 0000000 0123456888988884 44
Q ss_pred ceeeEEeEEEcCCcceEEEEeCCCCChhh--h---------------hhhcC---CCCCC--HHHHHHHHHHHH------
Q 039419 757 NIVRFLGCCWNRNTRLLMYDYMPNGSLGS--L---------------LHERR---DSCLE--WELRYRIILGAA------ 808 (1035)
Q Consensus 757 niv~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~---~~~l~--~~~~~~i~~~ia------ 808 (1035)
-..++++++.+ .+|+||++|.+|.. + +|... ...+. +....++..++.
T Consensus 136 i~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~ 211 (401)
T 3f2s_A 136 LGPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTE 211 (401)
T ss_dssp SSCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCS
T ss_pred CCCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcc
Confidence 45677776643 28999999765532 1 11110 11122 223333333221
Q ss_pred ----------------HHH----HHhhcc-CCCCeeccCCCcccEEEcCC------CceEEeeccCcc
Q 039419 809 ----------------QGL----AYLHHD-CVPPIVHRDIKANNILIGPE------FEPYIADFGLAK 849 (1035)
Q Consensus 809 ----------------~~L----~~LH~~-~~~~ivHrDikp~NIll~~~------~~~kl~DFG~a~ 849 (1035)
+-+ +++... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 212 ~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 212 ESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 111 223222 22368999999999999876 789999998775
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.84 E-value=0.17 Score=50.34 Aligned_cols=102 Identities=19% Similarity=0.155 Sum_probs=66.2
Q ss_pred ChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEEEcCCCceEEeeccCccccccCCcccccc
Q 039419 782 SLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVVEGDFARSSN 861 (1035)
Q Consensus 782 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 861 (1035)
||.+.+...+ .++++++++.++.|.+.+|.-.-.+- .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc------------
Confidence 7888888765 46999999999999999988762110 111233457999999999887754 1110
Q ss_pred ccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCC
Q 039419 862 TVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQP 902 (1035)
Q Consensus 862 ~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P 902 (1035)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888753 3456788899999999998875544
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.56 E-value=0.13 Score=57.80 Aligned_cols=73 Identities=7% Similarity=0.030 Sum_probs=47.6
Q ss_pred CeeeeeCCcEEEEEEECC--------CcEEEEEEecCCCcccccccccccccccccHHHHHHHHHHHhcCC-CCceeeEE
Q 039419 692 SVVGKGCSGIVYRAEMEN--------GEVIAVKKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIR-HKNIVRFL 762 (1035)
Q Consensus 692 ~~iG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~ 762 (1035)
+.+..|-...+|+....+ ++.|++++..... ... -.-.+|..+++.+. +.-..+++
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~--------------idR~~E~~~l~~L~~~gi~P~l~ 140 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKF--------------YDSKVELDVFRYLSNINIAPNII 140 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CC--------------CCHHHHHHHHHHHHHTTSSCCEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chh--------------cCHHHHHHHHHHHHhcCCCCCEE
Confidence 467778889999998763 5789999864321 100 01347888888874 33345566
Q ss_pred eEEEcCCcceEEEEeCCCCCh
Q 039419 763 GCCWNRNTRLLMYDYMPNGSL 783 (1035)
Q Consensus 763 ~~~~~~~~~~lv~e~~~~gsL 783 (1035)
+.+ . -++||||++|..+
T Consensus 141 ~~~--~--~~~I~efI~G~~l 157 (424)
T 3mes_A 141 ADF--P--EGRIEEFIDGEPL 157 (424)
T ss_dssp EEE--T--TEEEEECCCSEEC
T ss_pred EEc--C--CCEEEEEeCCccC
Confidence 533 2 3789999998764
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.02 E-value=1.7 Score=48.53 Aligned_cols=30 Identities=23% Similarity=0.411 Sum_probs=25.0
Q ss_pred CeeccCCCcccEEE------cCCCceEEeeccCccc
Q 039419 821 PIVHRDIKANNILI------GPEFEPYIADFGLAKL 850 (1035)
Q Consensus 821 ~ivHrDikp~NIll------~~~~~~kl~DFG~a~~ 850 (1035)
.++|+|+.+.||++ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4466799999988753
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.92 E-value=2.7 Score=41.85 Aligned_cols=83 Identities=8% Similarity=0.030 Sum_probs=60.4
Q ss_pred CCCceeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHH-HhhccCCCCeeccCCCcccE
Q 039419 754 RHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLA-YLHHDCVPPIVHRDIKANNI 832 (1035)
Q Consensus 754 ~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~ivHrDikp~NI 832 (1035)
.||++ -...-.+++...+.++.-+++.=...++. .+...+++++..|+.... +++.+ +|--+.|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-----~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-----TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-----SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-----cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceE
Confidence 57887 33333566666666665434332333322 788999999999999888 77776 7888999999
Q ss_pred EEcCCCceEEeeccCc
Q 039419 833 LIGPEFEPYIADFGLA 848 (1035)
Q Consensus 833 ll~~~~~~kl~DFG~a 848 (1035)
+++.++.+++.-.|+-
T Consensus 116 ~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 116 MFNRALEPFFLHVGVK 131 (219)
T ss_dssp EECTTCCEEESCCEET
T ss_pred EEeCCCcEEEEEcCCc
Confidence 9999999999877763
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.67 E-value=1.9 Score=42.82 Aligned_cols=116 Identities=15% Similarity=0.153 Sum_probs=76.2
Q ss_pred CCCceeeEEeEEEcCCcceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCCCCeeccCCCcccEE
Q 039419 754 RHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNIL 833 (1035)
Q Consensus 754 ~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivHrDikp~NIl 833 (1035)
.||+.+.. ..-.+++.+.+.++. ..+..++-.-+. .+...+++++..|+...++++.+ +|--+.|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~--~~~~~~f~~ik~---~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDI--NDNHTPFDNIKS---FTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECC--CTTSEEGGGGGG---SCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEc--CcccCCHHHHHh---cCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEE
Confidence 58888866 445555554444443 333333332222 77899999999999988887766 78889999999
Q ss_pred EcCCCceEEeeccCccccccCCccccccccCCcccccCCcccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 039419 834 IGPEFEPYIADFGLAKLVVEGDFARSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPID 904 (1035)
Q Consensus 834 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvvl~elltg~~P~~ 904 (1035)
++.++.+++.=.|+...+ +|.- .+...=.-.+=+++..+++++..|+
T Consensus 112 f~~~~~p~i~~RGik~~l-------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV-------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ECTTSCEEESCCEETTTB-------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EcCCCCEEEEEccCccCC-------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999877753322 2210 1111112235567788899988875
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=71.24 E-value=0.44 Score=54.34 Aligned_cols=62 Identities=6% Similarity=-0.101 Sum_probs=17.0
Q ss_pred CCeeeeeCCcEEEEEEECC-CcEEEE------EEecCCCcccccccccccccccccHHHHHHHHHHHhcCCCCceeeEEe
Q 039419 691 DSVVGKGCSGIVYRAEMEN-GEVIAV------KKLWPTTMAAEYDCQNDKIGIGGVRDSFSAEIKTLGSIRHKNIVRFLG 763 (1035)
Q Consensus 691 ~~~iG~G~~g~V~~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~ 763 (1035)
.+.+| ||.||+|.+.. ..+||| |......... .....|.+|..+++.++|||+++.++
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~------------e~~~~~~rea~l~~~~~H~niv~~h~ 211 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSE------------KRLTSLVRRATLKENEQIPKYEKIHN 211 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------------------CBCCC
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccc------------cccccccccccccccccccccCCCcc
Confidence 34556 99999998764 357888 6554322211 12346888999999999999999988
Q ss_pred EEEc
Q 039419 764 CCWN 767 (1035)
Q Consensus 764 ~~~~ 767 (1035)
+...
T Consensus 212 f~~~ 215 (463)
T 3cxl_A 212 FKVH 215 (463)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 7643
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=48.64 E-value=29 Score=24.56 Aligned_cols=9 Identities=22% Similarity=0.309 Sum_probs=3.6
Q ss_pred hHHHHHHHH
Q 039419 627 IAIALLVTF 635 (1035)
Q Consensus 627 i~i~~~~~~ 635 (1035)
++.+.++++
T Consensus 12 IA~gVVgGv 20 (44)
T 2l2t_A 12 IAAGVIGGL 20 (44)
T ss_dssp HHHHHHHHH
T ss_pred EEEeehHHH
Confidence 344444433
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=40.62 E-value=38 Score=23.91 Aligned_cols=6 Identities=17% Similarity=0.113 Sum_probs=2.3
Q ss_pred hHhhhc
Q 039419 645 FAVVRA 650 (1035)
Q Consensus 645 ~~~~r~ 650 (1035)
|.++|+
T Consensus 34 ~~RRR~ 39 (44)
T 2jwa_A 34 LIKRRQ 39 (44)
T ss_dssp HHHHHC
T ss_pred heehhh
Confidence 333333
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=37.69 E-value=53 Score=23.22 Aligned_cols=29 Identities=17% Similarity=0.079 Sum_probs=14.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhHhhhccC
Q 039419 624 KLKIAIALLVTFTIALAIFGAFAVVRAGK 652 (1035)
Q Consensus 624 ~~~i~i~~~~~~~v~~~~~~~~~~~r~~~ 652 (1035)
...-+++.+.++++++...++|+++|+.+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 44555555555555455544555555443
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=35.79 E-value=28 Score=24.03 Aligned_cols=13 Identities=15% Similarity=0.179 Sum_probs=5.7
Q ss_pred hHHHHHHHHHHHH
Q 039419 627 IAIALLVTFTIAL 639 (1035)
Q Consensus 627 i~i~~~~~~~v~~ 639 (1035)
+++++++++++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 4444444444433
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=34.73 E-value=99 Score=32.72 Aligned_cols=78 Identities=13% Similarity=0.126 Sum_probs=40.4
Q ss_pred cceEEEEeCCCCChhhhhhhcCCCCCCHHHHHHHHHHHHHHHHHhhccCC-CCeec-cCCCcccEEEcCCCc-eEEeecc
Q 039419 770 TRLLMYDYMPNGSLGSLLHERRDSCLEWELRYRIILGAAQGLAYLHHDCV-PPIVH-RDIKANNILIGPEFE-PYIADFG 846 (1035)
Q Consensus 770 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~-~~ivH-rDikp~NIll~~~~~-~kl~DFG 846 (1035)
..+++|||.+|..|.+.-...-...+..+....+. -+-++..+..... .+.+. .--.+.|||++.++. +.++|-+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn 233 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK 233 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred cceehhhhcCCCccccchhhhhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence 45699999987766554221100112322222111 1223444444321 11111 125799999987554 8889988
Q ss_pred Ccc
Q 039419 847 LAK 849 (1035)
Q Consensus 847 ~a~ 849 (1035)
.+.
T Consensus 234 ~af 236 (342)
T 1cja_A 234 IIP 236 (342)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
No 456
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=34.71 E-value=57 Score=23.06 Aligned_cols=30 Identities=10% Similarity=0.141 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhhccCccCC
Q 039419 627 IAIALLVTFTIALAIFGAFAVVRAGKMVGD 656 (1035)
Q Consensus 627 i~i~~~~~~~v~~~~~~~~~~~r~~~~~~~ 656 (1035)
|+.+.++++++++++.+.++...+++..++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 455556667777777778888888886543
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.94 E-value=75 Score=26.96 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=26.6
Q ss_pred ccccCCccccCCCCCcEEEccCccCCCCCCccccCCCCCcEEEccCC
Q 039419 259 FDGAIPEEIGNCKSLKTIDLSLNFFSGSLPQSFGNLSSLEELMLSNN 305 (1035)
Q Consensus 259 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 305 (1035)
++.+-..+|.++.+|+.+.|-.+ ++.+...+|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 33344455666666666666654 33355566666666666666554
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.62 E-value=47 Score=28.30 Aligned_cols=46 Identities=22% Similarity=0.192 Sum_probs=26.4
Q ss_pred cCCCCCCccccCCCCCcEEEccCCccccCCCCcccCCCccceecccc
Q 039419 282 FFSGSLPQSFGNLSSLEELMLSNNNISGSIPPVLSNATSLLQLQLDT 328 (1035)
Q Consensus 282 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 328 (1035)
.++.+...+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 445555566666777777666543 3335555555555555555543
No 459
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=21.58 E-value=30 Score=19.57 Aligned_cols=9 Identities=22% Similarity=1.021 Sum_probs=7.2
Q ss_pred CCccceeEE
Q 039419 17 NPCKWSHIT 25 (1035)
Q Consensus 17 ~~c~w~gi~ 25 (1035)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999975
Done!