BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039425
(413 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5
PE=2 SV=1
Length = 788
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 102 VEALFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCVYLKLK 161
V +F A P AI F + D TY++NRY +P GV C ++ +
Sbjct: 279 VGNVFWADPKAIMDFTHFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPILFGCAFIINE 338
Query: 162 WENNYIWALERLKSIMEENMLASVIVTDRELALMTVIQKHFPSATTFLCRWYI 214
E +++W + M + S I TD + + I FP A C+W+I
Sbjct: 339 TEASFVWLFNTWLAAMSAHPPVS-ITTDHDAVIRAAIMHVFPGARHRFCKWHI 390
>sp|Q9SY66|FRS11_ARATH Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11
PE=2 SV=1
Length = 680
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 102 VEALFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCVYLKLK 161
+E + ++ S+I+S + F ++ D T++ + +MPL GV + + CV L+ +
Sbjct: 257 LENIAWSYASSIQSYELFGDAVVFDTTHRLSAVEMPLGIWVGVNNYGVPCFFGCVLLRDE 316
Query: 162 WENNYIWALERLKSIMEENMLASVIVTDRELALMTVIQKHFPSATTFLCRWYI 214
++ WAL+ M I+TD + L I P+ LC W +
Sbjct: 317 NLRSWSWALQAFTGFM-NGKAPQTILTDHNMCLKEAIAGEMPATKHALCIWMV 368
>sp|Q9LIE5|FHY3_ARATH Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana
GN=FHY3 PE=1 SV=1
Length = 839
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 15/191 (7%)
Query: 98 DTNCVEALFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCVY 157
D V+ +F + + +F V+ +D TY N+Y MPL GV + C
Sbjct: 260 DDQRVKNVFWVDAKSRHNYGSFCDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCAL 319
Query: 158 LKLKWENNYIWALER-LKSIMEENMLASVIVTDRELALMTVIQKHFPSATTFLCRWYISR 216
+ + Y W +E L++I V++T+ ++ + +++ + FP+ L W++
Sbjct: 320 ISDESAATYSWLMETWLRAIG--GQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWHVLM 377
Query: 217 NVLVNCKNLFEANEIWQTFISSWNLLIL-SASEEEFAQRLK------GMETDFSKYLIAL 269
V +NL + + F+ + I S +E+FA++ G++ D +++I+L
Sbjct: 378 KV---SENLGQVVKQHDNFMPKFEKCIYKSGKDEDFARKWYKNLARFGLKDD--QWMISL 432
Query: 270 TYIRNVWLDKY 280
R W Y
Sbjct: 433 YEDRKKWAPTY 443
>sp|Q9SSQ4|FRS6_ARATH Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6
PE=2 SV=1
Length = 703
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 98 DTNCVEALFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCVY 157
D + +F A + S F V+ +D +Y + ++++PL+ GV T + C +
Sbjct: 273 DEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYISGKFEIPLVTFTGVNHHGKTTLLSCGF 332
Query: 158 LKLKWENNYIWALERLKSIMEENMLASVIVTDRELALMTVIQKHFPSATTFLCRWYISRN 217
L + +Y W L+ S+M+ + IVTDR L I + FP + +I R
Sbjct: 333 LAGETMESYHWLLKVWLSVMKRS--PQTIVTDRCKPLEAAISQVFPRSHQRFSLTHIMRK 390
Query: 218 VLVNCKNLFEANEIWQTFISS 238
+ L + + + F +
Sbjct: 391 IPEKLGGLHNYDAVRKAFTKA 411
>sp|Q9ZVC9|FRS3_ARATH Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3
PE=2 SV=2
Length = 851
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 85/232 (36%), Gaps = 22/232 (9%)
Query: 98 DTNCVEALFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCVY 157
+ N + +F A + + F + +D Y+ N++ +P GV C
Sbjct: 222 EDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYRCNQFRVPFAPFTGVNHHGQAILFGCAL 281
Query: 158 LKLKWENNYIWALERLKSIMEENMLASVIVTDRELALMTVIQKHFPSATTFLCRWYISRN 217
+ + + ++IW + + M + S +VTD++ A+ + FP A + +W + R
Sbjct: 282 ILDESDTSFIWLFKTFLTAMRDQPPVS-LVTDQDRAIQIAAGQVFPGARHCINKWDVLRE 340
Query: 218 V-----------------LVNCKNLFEANE----IWQTFISSWNLLILSASEEEFAQRLK 256
L NC N E E W + I ++L + R +
Sbjct: 341 GQEKLAHVCLAYPSFQVELYNCINFTETIEEFESSWSSVIDKYDLGRHEWLNSLYNARAQ 400
Query: 257 GMETDFSKYLIALTYIRNVWLDKYKDKFVSAWTNSVMHFRNIKASLERSLTM 308
+ F A + + + D +V+ T M FR + ++E M
Sbjct: 401 WVPVYFRDSFFAAVFPSQGYSGSFFDGYVNQQTTLPMFFRLYERAMESWFEM 452
>sp|Q3EBQ3|FRS2_ARATH Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2
PE=2 SV=1
Length = 807
Score = 38.5 bits (88), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 25/192 (13%)
Query: 102 VEALFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCVYLKLK 161
V +F A +F V++ D Y N Y +P GV+ + C +
Sbjct: 199 VRNVFWLDAKAKHDYCSFSDVVLFDTFYVRNGYRIPFAPFIGVSHHRQYVLLGCALIGEV 258
Query: 162 WENNYIWALER-LKSIMEENMLASVIVTDRELALMTVIQKHFPSATTFLCRWYISRNVLV 220
E+ Y W LK++ V++TD++ L ++ + FP C W +
Sbjct: 259 SESTYSWLFRTWLKAVG--GQAPGVMITDQDKLLSDIVVEVFPDVRHIFCLWSV------ 310
Query: 221 NCKNLFEANEIWQTFISS--------WNLLILSASEEEFAQRLKGMETDF----SKYLIA 268
L + +E+ F+S N + S ++E F +R M F ++++
Sbjct: 311 ----LSKISEMLNPFVSQDDGFMESFGNCVASSWTDEHFERRWSNMIGKFELNENEWVQL 366
Query: 269 LTYIRNVWLDKY 280
L R W+ Y
Sbjct: 367 LFRDRKKWVPHY 378
>sp|Q9S793|FRS8_ARATH Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8
PE=2 SV=2
Length = 725
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Query: 97 VDTNCVEALFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCV 156
D + +F A + F VL+ D T +N Y++PL+ G+ T + C
Sbjct: 296 ADDGSLRNVFWIDARARAAYSHFGDVLLFDTTCLSNAYELPLVAFVGINHHGDTILLGCG 355
Query: 157 YLKLKWENNYIWALERLKSIMEENMLASVIVTDRELALMTVIQKHFPSA 205
L + Y+W + M + +T++ A+ T + + FP A
Sbjct: 356 LLADQSFETYVWLFRAWLTCM-LGRPPQIFITEQCKAMRTAVSEVFPRA 403
>sp|Q6NQJ7|FRS4_ARATH Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4
PE=2 SV=2
Length = 732
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 7/152 (4%)
Query: 105 LFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCVYLKLKWEN 164
+F IE ++F V+ + +Y ++Y +PL+ GV + C L
Sbjct: 195 VFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVY 254
Query: 165 NYIWALERLKSIMEENMLASVIVTDRELALMTVIQKHFPSATTFLCRWYISRNVLVNCKN 224
Y+W ++ M V++TD+ A+ I P C W++ + N
Sbjct: 255 TYVWLMQSWLVAMG-GQKPKVMLTDQNNAIKAAIAAVLPETRHCYCLWHVLDQLPRN--- 310
Query: 225 LFEANEIWQ-TFISS-WNLLILSASEEEFAQR 254
+ +WQ TF+ + + S SEEEF +R
Sbjct: 311 -LDYWSMWQDTFMKKLFKCIYRSWSEEEFDRR 341
>sp|P48231|TCB2_YEAST Tricalbin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TCB2 PE=1 SV=1
Length = 1178
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 226 FEANEIWQTFISS-WNLLILSASEEEFAQRLKGMETDFSKYLIALTYIRNVWLDKYKDKF 284
+E+ E TF+ W ++ S S+ Q + G T S+ + +I+ +WLD++
Sbjct: 165 YESVEWLNTFLDKYWPIIEPSVSQ----QIVDGTNTALSENVAIPKFIKAIWLDQFTLGV 220
Query: 285 VSAWTNSVMHFRNIKAS---LERSLTMVQHDFKLLIFKELRGFVATNAL 330
+++ F+N K+ ++ L+ HD L K+ R +V +N +
Sbjct: 221 KPPRIDAIKTFQNTKSDVVVMDVCLSFTPHDMSDLDAKQCRNYVNSNVV 269
>sp|Q9LKR4|FRS10_ARATH Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana
GN=FRS10 PE=2 SV=2
Length = 685
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 75/180 (41%), Gaps = 7/180 (3%)
Query: 102 VEALFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCVYLKLK 161
VE + A+ ++ F V++ D +Y++ Y + L G+ + + CV L+ +
Sbjct: 272 VENIAWAYGDSVRGYSLFGDVVVFDTSYRSVPYGLLLGVFFGIDNNGKAMLLGCVLLQDE 331
Query: 162 WENNYIWALERLKSIMEENMLASVIVTDRELALMTVIQKHFPSATTFLCRWYISRNVLVN 221
++ WAL+ M I+TD + L I + P+ + +I +
Sbjct: 332 SCRSFTWALQTFVRFM-RGRHPQTILTDIDTGLKDAIGREMPNTNHVVFMSHIVSKLASW 390
Query: 222 CKNLFEANEIWQTFISSWNLLILSASEEEFAQRLKGMETDFS----KYLIALTYIRNVWL 277
++ ++ F + +++L + + +EF Q+ + T F ++ L R WL
Sbjct: 391 FSQTLGSH--YEEFRAGFDMLCRAGNVDEFEQQWDLLVTRFGLVPDRHAALLYSCRASWL 448
>sp|Q9SWG3|FAR1_ARATH Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1
PE=1 SV=1
Length = 827
Score = 35.4 bits (80), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 10/193 (5%)
Query: 105 LFLAHPSAIESLQAFPRVLIMDCTYQTNRYDMPLLEIAGVTSIDLTFSVCCVYLKLKWEN 164
LF A + + +F V+ D TY +PL GV + C + +
Sbjct: 258 LFWADAKSRDDYLSFNDVVSFDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVADESME 317
Query: 165 NYIWALERLKSIMEENMLASVIVTDRELALMTVIQKHFPSATTFLCRWYISRNVLVNCKN 224
++W ++ M VI+TD++ LM+ + + P+ W++ + +
Sbjct: 318 TFVWLIKTWLRAMG-GRAPKVILTDQDKFLMSAVSELLPNTRHCFALWHVLEKIPEYFSH 376
Query: 225 LFEANEIWQTFISSWNLLIL-SASEEEFAQRLKGMETDFS----KYLIALTYIRNVWLDK 279
+ + +E F+ +N I S +++EF R M + F ++L+ L R W+
Sbjct: 377 VMKRHE---NFLLKFNKCIFRSWTDDEFDMRWWKMVSQFGLENDEWLLWLHEHRQKWVPT 433
Query: 280 Y-KDKFVSAWTNS 291
+ D F++ + S
Sbjct: 434 FMSDVFLAGMSTS 446
>sp|Q9D9R9|F186A_MOUSE Protein FAM186A OS=Mus musculus GN=FAM186A PE=2 SV=2
Length = 1790
Score = 33.5 bits (75), Expect = 3.0, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 15/114 (13%)
Query: 243 ILSASEEEFAQRLKGMETDFSKYLIALTYIRNVWLDKYKDKFVSAWTNSVMHFRNIKASL 302
++ + +R+K ++ Y + Y +D+Y+ K + +WT+ +
Sbjct: 1605 LIQLARNHLTKRVKTIQNTGKGYEVQSLYTMLDRIDQYQKKVMHSWTDKQKQLEQRRKQC 1664
Query: 303 ERSLT----MVQHDFKLLI---------FKELRGFVATN--ALTMILDESRRVD 341
RS+T ++ +KL + FK++ GF L +++D+S+R D
Sbjct: 1665 LRSMTQFFSQLERGYKLSLSQPMPSIPSFKKIPGFTKLQRPVLELLIDDSKRSD 1718
>sp|Q6CYD8|SHE10_KLULA Sensitivity to high expression protein 10 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SHE10 PE=3 SV=1
Length = 636
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 169 ALERLKSIMEENMLASVIVTDRELALMTVIQKHFPS-------ATTFLCRWYIS--RNVL 219
A+ +K +E+ ++ SVI T R +L V K +P A + LCRWY+
Sbjct: 77 AVIHVKDTVEQKVVPSVIRTSRS-SLSLVYTKVYPRVVKYAFIAESSLCRWYLQLCHQYT 135
Query: 220 VNCKNLFEANEIWQTFISSWNLLILSASEEEFAQRLKGMETDFSKYLIALTYIRNVWLDK 279
V K + N ++T I L + + K MET KY ++Y VW DK
Sbjct: 136 VYVKPVV-INLYYKTMI---KYPFLEHAIYSVQAQYKIMETHVFKYYNIISYNVQVWNDK 191
Query: 280 Y 280
Y
Sbjct: 192 Y 192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,389,828
Number of Sequences: 539616
Number of extensions: 5332795
Number of successful extensions: 14961
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 14951
Number of HSP's gapped (non-prelim): 17
length of query: 413
length of database: 191,569,459
effective HSP length: 120
effective length of query: 293
effective length of database: 126,815,539
effective search space: 37156952927
effective search space used: 37156952927
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)